BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001683
         (1030 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score = 1320 bits (3416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1042 (64%), Positives = 807/1042 (77%), Gaps = 21/1042 (2%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEKFLIWYSGQ+EKQLRL+S+TKII GQRTVNFQ Q Q +R+ +SFS++YANGERSLDLI
Sbjct: 47   DEKFLIWYSGQEEKQLRLSSITKIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA+SWFLGL+A IS C+  R  S  R   GVQ+C +SPA Y RRKHNLGLLED  
Sbjct: 107  CKDKAQADSWFLGLKAVISRCQHPRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTP 166

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + SQVRSLCGSP+ SLSERCFSDGLSYS+DSFYSSESS S ++N+ ++  PSSP++E ++
Sbjct: 167  KFSQVRSLCGSPTQSLSERCFSDGLSYSADSFYSSESSVSNVKNVVDVSLPSSPYVEPDH 226

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
              + E  YA T    +   ++  P++ SP +E+ DIL+DVMIWGEG+ GG +GG V    
Sbjct: 227  LKQGEEIYAGTEIQTDMLSQVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFG 286

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +QN  Q DALLPKLLES  MLDV+ ISLG KHAALVTK GEVFCWGEG  G LGHKVNMD
Sbjct: 287  NQNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMD 346

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            +  PK+VE L+G+ V+SVSCGE+QTCALT SGE+YTWG N  G DLVGERR RS W+P +
Sbjct: 347  MGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSR 406

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            L   L+G  +S VACGEWH AIVSTSGQLFTYGDGTFGVLGHG L+++SQPKEVESL GL
Sbjct: 407  LSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGL 466

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
             VK+ ACGPWHTAAIV++  DR K N  GGKLFTWGD DKGRLGH D ERKLLPTCV +L
Sbjct: 467  WVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQL 526

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            VD DFVQ SCGRMLTVGLT LG VYTMGSAVHGQLGNP+AKD+SI +V GKLK+EFVK I
Sbjct: 527  VDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEI 586

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            SSGSYHVA LTS GS+YTWG  ANGQLGLGD+++R +P  VEALRDRQVES+ CGS  TA
Sbjct: 587  SSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTA 646

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
            AICLHKSIS  DQS+CS CRM FGF RKKHNCYNCGL FC ACS KK++NASL PNK KP
Sbjct: 647  AICLHKSISSTDQSACSGCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKP 706

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS- 720
             RVCD CY +LQ+I HS RLLK EN +PR LL  Q +  +E KE++G  TP+R Q F+S 
Sbjct: 707  FRVCDPCYTYLQRIKHSSRLLKLENHNPRQLLMTQKTSFDE-KEDRGEGTPARTQ-FSSV 764

Query: 721  -----KQSRNVERKP-------GECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPT 768
                 + S++ E+KP        + +E  SSLS+GL RWGQV CP  F+ +C E S+   
Sbjct: 765  GQPCNEASQSYEKKPFKNQVENQQTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSIALV 824

Query: 769  PIPKTQMSTHSPLLRKISLGSNF-IPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQC 827
            P+   Q+S+     +    GS + +     +EKD  +++K+L EEV+RLR +AR+LEK C
Sbjct: 825  PLSNNQLSSVPLCWKHSPRGSKYMVSTVVNMEKDFPDTDKILIEEVERLRSEARSLEKLC 884

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD 887
            Q+ ++K+QECQQK++E WSLAREEA KCKAAKE+IKAL+ RLHT+SEK+S+ ++AK+G+D
Sbjct: 885  QMRSEKIQECQQKLQETWSLAREEAAKCKAAKEVIKALSSRLHTMSEKLSSERDAKDGID 944

Query: 888  ANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVA 947
            + LP  +       V  PK+R++DSLC SPIVFSN L+S+YGR+ C  ++  SVEDS + 
Sbjct: 945  SKLPQIITR----YVDTPKERQLDSLCGSPIVFSNSLRSMYGRDECQGHTR-SVEDSCLE 999

Query: 948  RTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEEN 1007
            + +P+Q GTK SKLE+ EQYEPG+YITF TL SGQ+GLKRVRFSR+RFTEK AERWWEEN
Sbjct: 1000 KIDPRQNGTKPSKLEWVEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEEN 1059

Query: 1008 QVVVYQKYGIEEYSNLNQNQMR 1029
            Q+ VYQ YGIE Y + +QN+M+
Sbjct: 1060 QIGVYQNYGIEGYISSSQNKMK 1081


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1059 (62%), Positives = 788/1059 (74%), Gaps = 54/1059 (5%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEK+LIWYSGQ+EKQL+L+SV KI+ GQRTVNFQ Q QPD++ QSFS+IYA GERSLDLI
Sbjct: 52   DEKYLIWYSGQEEKQLKLSSVMKIVTGQRTVNFQRQLQPDKEHQSFSLIYAKGERSLDLI 111

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA+SWF+GLRA IS C RSR  + LR  R  QSCV+SPA Y RRKHNLG+LED  
Sbjct: 112  CKDKAQADSWFIGLRAVISRCHRSRPLTALRSHRSAQSCVNSPAGYFRRKHNLGILEDDK 171

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            E SQVRSLCGSP+ SLSE+CFSDGLS SSDSF  SESS  Q+ N  +I+ P+SP +    
Sbjct: 172  EFSQVRSLCGSPTPSLSEKCFSDGLSLSSDSFCLSESSL-QMHNAVDILVPNSPCV-GPI 229

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
              K   +YA ++  K+ S R VTP YG   I + D LKDV++WGEGV GG+IGG V    
Sbjct: 230  LEKCGSDYACSKFQKDMSFRFVTPAYGCTQIGKNDSLKDVLMWGEGVEGGNIGGMVQRLG 289

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +Q+  QVDAL+PKLLES  MLDV++ISLG KHAAL+TK GEVFCWG+G  G+LGHKVNMD
Sbjct: 290  NQSVMQVDALVPKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMD 349

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            V  PK+VE L  ++++SV CGE+QTCALT SGE+YTWG N +GA+L  E R+RS WLP K
Sbjct: 350  VGMPKVVESLDDVHIKSVVCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYK 409

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            LF  LDG+ +SKVACGEWHTAIVS SGQLFTYGDGTFGVLGHG+LQ+VS PKEV SLRGL
Sbjct: 410  LFGPLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGL 469

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
             VKSVACG WHTAAIVDI+ DR K NA+GGKLFTWGD DKGRLGH D E+KL+PTCV +L
Sbjct: 470  SVKSVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL 529

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            VD+DF++ SCGRMLTV LT  GKVYTMGS+VHGQLGNP+AKD+SIT+VEGKLKEEFVK I
Sbjct: 530  VDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEI 589

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            SSGSYHVAVLTSGG+VYTWGK  NGQLGLG+ ++R +PT+VEALRDR+VES+ CGS++TA
Sbjct: 590  SSGSYHVAVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTA 649

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
            AICLHKSISV DQSSCS CRMPFG  RKKHNCYNCGL FC +CS+KK+INASL PNK KP
Sbjct: 650  AICLHKSISVTDQSSCSGCRMPFGLTRKKHNCYNCGLLFCHSCSSKKVINASLAPNKSKP 709

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSK 721
            SRVCD+C NHLQK+T SGR+ K      + LL     L+ E KE KG  TP    + +  
Sbjct: 710  SRVCDSCLNHLQKVTLSGRMSKPGTHGSKQLLCPNKVLANE-KEGKGEATPPGSHTRSVS 768

Query: 722  QS---------RNVERKPGE---CLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTP 769
            QS         R  ++  GE    +E+ SSLS+GL RWGQVSCP+ F+++  + S  P  
Sbjct: 769  QSYNQDSPVSQRKTQKDQGEHQHHVETVSSLSAGLPRWGQVSCPVVFESYYSKNSFLPVE 828

Query: 770  IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQI 829
               T               SN I I    +  + ESN ML+  VQRL  Q RNLE QC+I
Sbjct: 829  SKSTD--------------SNAILI----DDGMLESNMMLS-SVQRLEAQVRNLEMQCEI 869

Query: 830  GNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD-- 887
             +QK+QEC++ IE  WSLAREEA K KAA EIIKAL  RL  +SEKISA ++ K GV+  
Sbjct: 870  RDQKIQECRETIERTWSLAREEAAKRKAANEIIKALTSRLRAMSEKISAGRKTKGGVELS 929

Query: 888  --ANLPPKLD-------------TDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGREL 932
               N P   D                 PEV LPKDR++DSL SSPIVFSN LKS+  R L
Sbjct: 930  VSQNTPAYKDIISLVSPRATLASVHLPPEVNLPKDRQLDSLSSSPIVFSNTLKSMDSRGL 989

Query: 933  CHDNSSGSVE-DSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFS 991
            CH+   G +E DS+  R + +Q GTK S+LE+ EQYEPG+YITFT LP G+KGLKRVRFS
Sbjct: 990  CHE--IGRLENDSQTPRADSKQNGTKGSRLEWVEQYEPGVYITFTVLPGGEKGLKRVRFS 1047

Query: 992  RRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQMRS 1030
            R+RF EK AERWWEENQV VYQKYGIE Y + NQ+Q ++
Sbjct: 1048 RKRFAEKEAERWWEENQVTVYQKYGIEGYVDSNQHQNKT 1086


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 1178 bits (3048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1065 (59%), Positives = 757/1065 (71%), Gaps = 69/1065 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERS--LD 59
            DEK+LIWYSGQ+EKQLRL+ VT I+ GQRT     Q QPD++ QSFS+IY NG+ S  LD
Sbjct: 47   DEKYLIWYSGQEEKQLRLSLVTTIVPGQRTR----QLQPDKENQSFSLIYTNGDHSSSLD 102

Query: 60   LICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            LICKD  QA+SWF+GLRA IS C  SR F  L+  R  QSCV+SPA +IRRKHNLG+LED
Sbjct: 103  LICKDNAQADSWFIGLRAVISKCHHSRPFCALKNHRVAQSCVNSPAGFIRRKHNLGILED 162

Query: 120  ATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMET 179
             TELSQV SL GSP  S+S+R FSDGLS SSDS   SE+S   +Q + + + P +P+ E 
Sbjct: 163  DTELSQVHSLYGSPMQSISDRGFSDGLSLSSDSLCFSEASLPLLQTVEDFLIPHTPNAEP 222

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDG 239
            +N  K   +       KN  HR++   + S   E+ D+LKDV+IWGEG  GG+IG   + 
Sbjct: 223  QNIKKNGSDNGFAEFQKNMCHRIIGSNHRSQRTEKNDVLKDVLIWGEGAGGGNIGCVSNH 282

Query: 240  SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
                +  QVD+LLPKLLE  VMLDV+NISLG  HAAL+TK GEVFCWGEG  G+LGHKV+
Sbjct: 283  FGYHSTLQVDSLLPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVD 342

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            MDVS P +VE L G  V+ V+CGE+QTCALT SGE++ WG N +G +LV E R+ S WLP
Sbjct: 343  MDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLP 402

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            R++   L GV +S VACG+WHTA VS+SGQLFTYGDGTFGVLGHGNLQ+VS PKEVESL+
Sbjct: 403  RQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLK 462

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
            GL VKSVACG WHTAAIVD++ DR K N +GGKLFTWGD DKGRLGH D E+KL PTCV 
Sbjct: 463  GLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVA 522

Query: 480  RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            +LV+ DFVQ SCGRMLTV LT  GK+YTMGS+VHGQLGNP+AK++SI +VEGKLKEEFVK
Sbjct: 523  QLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVK 582

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
             ISSGSYHVA LTSGGSVYTWGK  NGQLGLG+ ++R  PT VEALRDRQV+S+ CGS++
Sbjct: 583  EISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNL 642

Query: 600  TAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG 659
            TAAICLHKSISV DQS+C  CRMPFGF RKKHNCYNCGL FC ACS+KK+INASL PNK 
Sbjct: 643  TAAICLHKSISVSDQSACKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKLINASLAPNKS 702

Query: 660  KPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFT 719
            K  RVCD+C+N LQ ITH G          R LL+ Q +LS+E KEE+G  TP  G    
Sbjct: 703  KLCRVCDSCFNSLQNITHPG-------GGSRKLLSQQKALSDE-KEERGGATPP-GHRLQ 753

Query: 720  SKQSRNVERKPGE------------CLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEP 767
                 ++E +PGE             LE+  S+S+GL RWGQVSCP  F++   + SV P
Sbjct: 754  LMSRPSLESQPGERKTSRNQGEKQQHLETVPSISAGLPRWGQVSCPAIFESCYRKDSVHP 813

Query: 768  T-PIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
              PI  +  S +                   +E+D  ESN +L EEV+RLR QA+ LE Q
Sbjct: 814  LEPISSSSSSLN-------------------LEEDKHESNNILVEEVERLRAQAKGLEMQ 854

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVR----------LHTLSEKI 876
            CQ G+QK+QECQQ IE+ W LAREEA K KAA  IIKAL +R          LH +S+K+
Sbjct: 855  CQTGSQKIQECQQTIEKTWLLAREEAAKRKAANGIIKALVLRVILFPSAILWLHAMSDKV 914

Query: 877  SAAKEAKEGVDANLP---------PKLDTDKHP--EVKLPKDRKVDSLCSSPIVFSNKLK 925
            S  K A++G D   P         P +    H    V+LPKD  V+SL SSPIVFSN LK
Sbjct: 915  SVRKAAEDGGDPYQPQTRPDYTDTPTVFASTHSPLRVRLPKDCNVESLSSSPIVFSNSLK 974

Query: 926  SVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGL 985
            S+ GRELCH+NS    ED   + T+P++KGT ASKLE+ EQYEPG+YITFT  P G+KGL
Sbjct: 975  SLDGRELCHENSMPG-EDLHDSTTDPRRKGTNASKLEWVEQYEPGVYITFTVSPGGEKGL 1033

Query: 986  KRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQMRS 1030
            KRVRFSR+RF EK A RWWEEN+ +VYQ YGIE Y+  NQNQ +S
Sbjct: 1034 KRVRFSRKRFAEKEAGRWWEENEAMVYQHYGIEGYNKSNQNQEKS 1078


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score = 1156 bits (2991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1042 (58%), Positives = 747/1042 (71%), Gaps = 80/1042 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEKFLIWYSGQ+EKQLRL+S+TKII GQRTVNFQ Q Q +R+ +SFS++YANGERSLDLI
Sbjct: 47   DEKFLIWYSGQEEKQLRLSSITKIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA+SWFLGL+A IS C+  R  S  R   GVQ+C +SPA Y RRKHNLGLLED  
Sbjct: 107  CKDKAQADSWFLGLKAVISRCQHPRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTP 166

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + SQVRSLCGSP+ SLSERCFSDGLSYS+DSFYSSESS S ++N+ ++  PSSP++E ++
Sbjct: 167  KFSQVRSLCGSPTQSLSERCFSDGLSYSADSFYSSESSVSNVKNVVDVSLPSSPYVEPDH 226

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
              + E  YA T    +   ++  P++ SP +E+ DIL+DVMIWGEG+ GG +GG V    
Sbjct: 227  LKQGEEIYAGTEIQTDMLSQVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFG 286

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +QN  Q DALLPKLLES  MLDV+ ISLG KHAALVTK GEVFCWGEG  GRLGHKVNMD
Sbjct: 287  NQNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMD 346

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            +  PK+VE L+G+ V+SVSCGE+QTCALT SGE+YTWG N  G DLVGERR RS W+P +
Sbjct: 347  MGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSR 406

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            L   L+G  +S VACGEWH AIVSTSGQLFTYGDGTFGVLGHG L+++SQPKEVESL GL
Sbjct: 407  LSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGL 466

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
             VK+ ACGPWHTAAIV++  DR K N  GGKLFTWGD DKGRLGH D ERKLLPTCV +L
Sbjct: 467  WVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQL 526

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            VD DFVQ SCGRMLTVGLT LG VYTM     G+LG+   +DR+   V  +L+   V+ I
Sbjct: 527  VDHDFVQVSCGRMLTVGLTCLGTVYTM-----GRLGD--TEDRNSPAVVEELRYRQVESI 579

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            + GS   A +                                                  
Sbjct: 580  ACGSGFTAAI-------------------------------------------------- 589

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
              CLHKSIS  DQS+CS CRM FGF RKKHNCYNCGL FC ACS KK++NASL PNK KP
Sbjct: 590  --CLHKSISSTDQSACSGCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKP 647

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS- 720
             RVCD CY +LQ+I HS RLLK EN SPR LL  Q +  +E KE++G  TP+R Q F+S 
Sbjct: 648  FRVCDPCYTYLQRIKHSSRLLKLENHSPRQLLMTQKTSFDE-KEDRGEGTPARTQ-FSSV 705

Query: 721  -----KQSRNVERKP-------GECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPT 768
                 + S++ E+KP        + +E  SSLS+GL RWGQV CP  F+ +C E S+   
Sbjct: 706  GQPCNEASQSYEKKPFKNQVENQQTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSIALV 765

Query: 769  PIPKTQMSTHSPLLRKISLGSNF-IPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQC 827
            P+   Q+S+     +    GS + +     +EKD  +++K+L EEV+RLR +AR+LEK C
Sbjct: 766  PLSNNQLSSVPLCWKHSPRGSKYMVSTVVNMEKDFPDTDKILIEEVERLRSEARSLEKLC 825

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD 887
            Q+ ++K+QECQQK++E WSLAREEA KCKAAKE+IKAL+ RLHT+SEK+S+ ++AK+G+D
Sbjct: 826  QMRSEKIQECQQKLQETWSLAREEAAKCKAAKEVIKALSSRLHTMSEKLSSERDAKDGID 885

Query: 888  ANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVA 947
            + LP  +       V  PK+R++DSLC SPIVFSN L+S+YGR+ C  ++  SVEDS + 
Sbjct: 886  SKLPQIITR----YVDTPKERQLDSLCGSPIVFSNSLRSMYGRDECQGHTR-SVEDSCLE 940

Query: 948  RTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEEN 1007
            + +P+Q GTK SKLE+ EQYEPG+YITF TL SGQ+GLKRVRFSR+RFTEK AERWWEEN
Sbjct: 941  KIDPRQNGTKPSKLEWVEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEEN 1000

Query: 1008 QVVVYQKYGIEEYSNLNQNQMR 1029
            Q+ VYQ YGIE Y + +QN+M+
Sbjct: 1001 QIGVYQNYGIEGYISSSQNKMK 1022


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score = 1143 bits (2957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1031 (59%), Positives = 729/1031 (70%), Gaps = 106/1031 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGER--SLD 59
            DEK+LIWYSGQ+EKQLRL+ V KI+ GQRT     Q QPD++ QSFS+IY NG+R  SLD
Sbjct: 47   DEKYLIWYSGQEEKQLRLSLVVKIVTGQRTR----QLQPDKENQSFSLIYTNGDRARSLD 102

Query: 60   LICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            LICKDK QA+SWF+GLRA IS C RSR    L+  RG QSCV+SPA +IRRKHNLG+LED
Sbjct: 103  LICKDKAQADSWFIGLRAVISRCHRSRPICVLKNHRGAQSCVNSPAGFIRRKHNLGILED 162

Query: 120  ATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMET 179
             TELSQVRSL GSP+ SLS+R  SDGLS SSDS + S SS  Q+QN+ +++    P++E 
Sbjct: 163  DTELSQVRSLSGSPTQSLSDRGISDGLSLSSDSLFFSGSSLPQMQNVEDLLVSYIPNVEP 222

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDG 239
            +N  K   + A +   KN  HR++   +GSP  E+KDILKDV+IWGEGV  G+IG   + 
Sbjct: 223  QNLKKNGSDTAYSEFQKNTCHRVIGLNHGSPRTEKKDILKDVLIWGEGVEVGNIGCVDNQ 282

Query: 240  SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
                N  QVDALLPKLLES VMLDV NISLG KHAAL+TK GEVFCWGEG  G+LGHKV+
Sbjct: 283  FGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVD 342

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            MDVS PK+VE L G++V+SV+CGE+QTCALT SGE+Y WG N +GA+L  E RSRS WLP
Sbjct: 343  MDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLP 402

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            R++   L GV +  VACG+WHTAIVS+SGQLFTYGDG+FGVLGHGNL +VSQPKEVESL+
Sbjct: 403  RRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLK 462

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
            GL VKSVACG WHTAAIVDI+VDR K N +GGKLFTWGD DKGRLGH D E+KLLPTCV 
Sbjct: 463  GLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVA 522

Query: 480  RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            +LV+ DF Q SCGRMLTV LT  GKVYTMGS+VHGQLGNP AKD+SI +VEGKLKEEFVK
Sbjct: 523  QLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVK 582

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
             ISSGSYHVA LTS GS+YTWGK  NGQLGLG+ ++R  PT VEALRD QV+S+ CGS++
Sbjct: 583  EISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNL 642

Query: 600  TAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG 659
            TAAICLHKSISV DQS+C  CRMPFGF RKKHNCYNCGL FC ACS+KK++NASL PNK 
Sbjct: 643  TAAICLHKSISVSDQSACKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKVMNASLAPNKS 702

Query: 660  KPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFT 719
            KPSRVCD+C+  +Q ITH G  L+         L  Q SL     E K   TP       
Sbjct: 703  KPSRVCDSCFYSMQNITHPGHRLQ---------LMSQPSLEIRPGERK---TP------- 743

Query: 720  SKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHS 779
                RN   K  + LE+A S+S+GL +WGQVSCP  F++ C+ K+ E   +P    S+ S
Sbjct: 744  ----RNQGEKQ-QHLETAFSISAGLPQWGQVSCPAIFES-CYIKNSE---LPLESKSSIS 794

Query: 780  PLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQ 839
              L               +E++LS+S KML EEV+RLR QAR+LE QCQ G+QK++ECQ 
Sbjct: 795  SSL--------------NLEEELSDSKKMLIEEVKRLRAQARSLEMQCQTGSQKIEECQL 840

Query: 840  KIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKH 899
             IE+ W LAREEA K KAA EIIKALA+R          + + +E            D  
Sbjct: 841  TIEKTWFLAREEAAKRKAANEIIKALALR----------SMDGRE--------LCHEDSR 882

Query: 900  PEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKAS 959
            PE  L                             HD ++           +P++ GTKAS
Sbjct: 883  PEEDL-----------------------------HDTTT-----------DPRRNGTKAS 902

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEE 1019
            K E+ EQYEPG+YITFT LPSG KGLKRVRFSR+RF EK AERWWEENQ +VYQKYGIE 
Sbjct: 903  KHEWVEQYEPGVYITFTILPSGLKGLKRVRFSRKRFAEKEAERWWEENQAIVYQKYGIEG 962

Query: 1020 YSNLNQNQMRS 1030
            Y+  NQN  +S
Sbjct: 963  YNKSNQNLTKS 973


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1054 (57%), Positives = 745/1054 (70%), Gaps = 39/1054 (3%)

Query: 1    MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
            MDEKFL+WYSG +EKQLRL+ V KII G+   +   Q Q  +K +SFS+IY+N ERSL L
Sbjct: 46   MDEKFLVWYSGNQEKQLRLSLVVKIIPGKMLPSLVNQLQITKKLESFSLIYSNCERSLVL 105

Query: 61   ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
             CKDK QA+ WFLGL + IS     R  + L+++RG+ SC +SPA +IRRK+NLGLLED+
Sbjct: 106  TCKDKAQADCWFLGLSSIISRNHHPRPVTILKDQRGIVSCANSPAGFIRRKYNLGLLEDS 165

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
             +  QVRSLCGSP+LSLSERC SDGLS+S DSFY S+      Q+  +I    +P  E +
Sbjct: 166  ADFPQVRSLCGSPTLSLSERCLSDGLSHSFDSFYPSDG-----QSEGDISAWGTPVAEPD 220

Query: 181  NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
               +  L+  +T   KN   R V P + SP IE+ +ILKDVMIWGEG+ GG IGG  + S
Sbjct: 221  VLNRGSLD--ETIYEKNALSRFVAPVHTSPYIEKNNILKDVMIWGEGIEGGLIGGGTERS 278

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
             S     VDALLPKLLES +MLDVQ+ISLG KHAAL+TK GE+F WG+GK GRLGHK+NM
Sbjct: 279  ASHKGMLVDALLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINM 338

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            D+  PKLV+ L+GI  +SV+CGE+QTCALTK+GE+YTWG +  GAD   E  SRS WLP+
Sbjct: 339  DLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ 398

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            KL   L G+ +S VACGEWHTA+VS  G+LFTYGDGTFG LGHGNL ++SQPKEVESL G
Sbjct: 399  KLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNG 458

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            L VKSVACG WHTAAIVDIM+DR K  +  GKLFTWGD DKG+LGH D ERKLLPTCV  
Sbjct: 459  LCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAP 518

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            LVD DF Q SCGRMLTVGLT +G+VYTMGS++HGQLGN  ++D S+ +VEGKLKEEFVK 
Sbjct: 519  LVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKA 578

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            ISSGSYHVA LTS G VYTWGK A+GQLGLGDS +R  PTFVEAL D+QVES+ CGS+ T
Sbjct: 579  ISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFT 638

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
            AAICLH+SI+  DQSSC  C++PFGF RKKHNCY+CGL+FC  CS+KK  NA+L PNK K
Sbjct: 639  AAICLHRSITSSDQSSCYGCKLPFGFTRKKHNCYHCGLYFCRMCSSKKTTNAALAPNKSK 698

Query: 661  PSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA-------LTPS 713
              RVCD C+N L++  H  R LKQEN   +N L  Q     E  +++         L+P+
Sbjct: 699  AFRVCDPCFNILRRHIHLDRSLKQENTRTQNSLKQQKVSGFERVDKRSMSSKHSPLLSPT 758

Query: 714  RGQSFTSKQSRNVERKPGECLESASSL-SSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPK 772
            + Q+    QS       GE  +   +  SSG+  WGQVSCP  FK  C  ++ +    P 
Sbjct: 759  K-QNIDEMQSHWKFINQGENQQDLETFTSSGIPSWGQVSCPASFKM-CDRENTKTLFSPS 816

Query: 773  TQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQ 832
               +T + L+   S  S+ I    ++++ L  S++ L+EEVQRLR + +NLE QC  G++
Sbjct: 817  QNQTTANDLVHLKSPNSSAI----SLDRFLYGSSEKLSEEVQRLRTEVKNLELQCNDGDE 872

Query: 833  KVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLP- 891
            K+Q+C+QKIEEAWS+AREEA KCKAAKEIIKALA+RLHT+SEK+S+  + K+ VDAN P 
Sbjct: 873  KMQKCRQKIEEAWSVAREEAAKCKAAKEIIKALALRLHTISEKVSSRGDTKDEVDANKPH 932

Query: 892  ----------------PKLDTDKHPEVKLPKDRKV-DSLCSSPIVFSNKLKSVYGRELCH 934
                            P   T   PE++LPKDR + DSL +SPIVFSN  KS+YGR    
Sbjct: 933  VTPVYSDSSNFGHFHSPSAVTCLPPELQLPKDRVIGDSLYNSPIVFSNTFKSLYGRPAFR 992

Query: 935  DNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRR 994
              S  +  D    RT  +       K E+ EQYE G+YITFT+LP G KGLKRVRFSRRR
Sbjct: 993  HVSKSTDPDPIANRTSAKNGNANYLKDEWMEQYEAGVYITFTSLPGGHKGLKRVRFSRRR 1052

Query: 995  FTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQM 1028
            F+E+ AERWWEENQV+VYQKYGI+ Y++ N +QM
Sbjct: 1053 FSEREAERWWEENQVIVYQKYGIDGYTDSNHSQM 1086


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score = 1103 bits (2853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1042 (55%), Positives = 736/1042 (70%), Gaps = 68/1042 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE+ LIWYSGQ+EK LRL+ VTKI+ GQ  +  Q Q + +++  SFS+IYANGERSLDLI
Sbjct: 49   DERNLIWYSGQQEKHLRLSVVTKIVQGQEHIRSQKQNESEKECHSFSLIYANGERSLDLI 108

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA SWF+GL+A IS C+  R FS LR  +GVQSC SSPA  +RRK NLGLL+D +
Sbjct: 109  CKDKAQAASWFVGLKAVISRCQHPRAFSSLRSCKGVQSCASSPAGILRRKKNLGLLDDTS 168

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + +QV S+C SP+LSLSERCFSDGLS +SD+FYSS S  S    +++   PSSP+++ +N
Sbjct: 169  QFTQVHSVCASPTLSLSERCFSDGLSCTSDNFYSSSSFLSNTHGVTDNSVPSSPYIDPDN 228

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                E    D    KN S+R +  +  SP + + ++LKDVMIWG G+      G + G V
Sbjct: 229  HSNIESTRIDKEHKKNLSYRYLMHST-SPHVGKNNVLKDVMIWGGGI------GCLVGIV 281

Query: 242  SQNKTQ--VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
            ++   Q  + +L+PKLLES  MLDV NI+LG KHAAL TK+GEVFCWG GK GRLG K++
Sbjct: 282  NERFVQPRIYSLVPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKID 341

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            MD+S PK+V+ L+G++V++V+CGE+ TCALT SGE+YTWG++   ADL+ E R+RS W+P
Sbjct: 342  MDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIP 401

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            +KL  +LDG+ +S VACGEWHTAIVS+ G+LFTYGDGTFGVLGHG+L++ S PKEVESL 
Sbjct: 402  QKLGGSLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLS 461

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
            GL+V+S ACG WHTAAIV++M DR + N+  GKLFTWGD D+GRLGHVD   KL+PT VT
Sbjct: 462  GLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVT 521

Query: 480  RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            +LVD+DFVQ SCGRMLTV LT +GKV+ MGSA +GQLGNP A+D+++ +VEG+LK+EFVK
Sbjct: 522  QLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAV-MVEGQLKQEFVK 580

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
             IS+GSYHVAVLTSGGSVYTWG+  NGQLGLGD+++R TP FVEALRDRQV ++ CG S 
Sbjct: 581  VISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSF 640

Query: 600  TAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG 659
            TAAI LHK IS+ DQS+C+ CR+PFGF RKKHNCY+CGL FC ACS+KKI NA L P+K 
Sbjct: 641  TAAISLHKPISISDQSTCTGCRLPFGFTRKKHNCYSCGLLFCRACSSKKITNAPLAPSKS 700

Query: 660  KPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFT 719
            K  RVCD C++  Q  TH     K  N + + LL  Q  ++ +V E++G  T ++G   +
Sbjct: 701  KAFRVCDQCFDKRQGGTHPVMASKSRNHNSQQLLKHQHKIA-DVTEDRGETTVTQGPLLS 759

Query: 720  SKQSRNVERKPG------------ECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEP 767
              QS   +  P             + +E +S +  G+ +WGQV CP  FK +  E     
Sbjct: 760  LGQSCYRKSMPSGRKDWKSNQESQQDVEDSSPMLGGMPQWGQVPCPAIFKINSTEN---- 815

Query: 768  TPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQC 827
                                     P+A T   D ++S+K+L EEV RLR +A+ LE+QC
Sbjct: 816  -------------------------PVAHT---DATKSDKVLLEEVHRLRAEAKRLEEQC 847

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD 887
            ++ N K+QECQQKIEE+W +AREEA KCKAAKE+IKALA+RLHT+S K +  +E K G +
Sbjct: 848  ELKNHKIQECQQKIEESWFVAREEAAKCKAAKEVIKALALRLHTISGKDNVGQEGKAGPN 907

Query: 888  ANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCH--DNSSGSVEDSK 945
              +P       H E+K P+D  VDSL +SPIVFS+ LKS +GR L    DNS+       
Sbjct: 908  EFVPNVAPI--HTEMKSPRDVNVDSLSNSPIVFSDTLKSKFGRSLFPKIDNSN------- 958

Query: 946  VARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWE 1005
              R E QQ      K E+ EQYEPG+YITFTTL  G+KGLKRVRFSR+RF+EK AE+WWE
Sbjct: 959  --RAESQQDNIDGLKAEWVEQYEPGVYITFTTLQCGKKGLKRVRFSRKRFSEKEAEKWWE 1016

Query: 1006 ENQVVVYQKYGIEEYSNLNQNQ 1027
            ENQ  VY KYGIE Y N N +Q
Sbjct: 1017 ENQGTVYHKYGIEGYINNNTSQ 1038


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score = 1095 bits (2832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1054 (56%), Positives = 733/1054 (69%), Gaps = 70/1054 (6%)

Query: 1    MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
            MDEKFL+WYSG +EKQLRL+ V KII G+   +   Q Q  +K +SFS+IY+N ERSL L
Sbjct: 66   MDEKFLVWYSGNQEKQLRLSLVVKIIPGKMLPSLVNQLQITKKLESFSLIYSNCERSLVL 125

Query: 61   ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
             CKDK QA+ WFLGL + IS     R  + L+++RG+ SC +SPA +IRRK+NLGLLED+
Sbjct: 126  TCKDKAQADCWFLGLSSIISRNHHPRPVTILKDQRGIVSCANSPAGFIRRKYNLGLLEDS 185

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
             +  QVRSLCGSP+LSLSERC SDGLS+S DSFY S+      Q+  +I    +P  E +
Sbjct: 186  ADFPQVRSLCGSPTLSLSERCLSDGLSHSFDSFYPSDG-----QSEGDISAWGTPVAEPD 240

Query: 181  NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
               +  L+  +T   KN   R V P + SP IE+ +ILKDVMIWGEG+ GG IGG  + S
Sbjct: 241  VLNRGSLD--ETIYEKNALSRFVAPVHTSPYIEKNNILKDVMIWGEGIEGGLIGGGTERS 298

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
             S     VDALLPKLLES +MLDVQ+ISLG KHAAL+TK GE+F WG+GK GRLGHK+NM
Sbjct: 299  ASHKGMLVDALLPKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINM 358

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            D+  PKLV+ L+GI  +SV+CGE+QTCALTK+GE+YTWG +  GAD   E  SRS WLP+
Sbjct: 359  DLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ 418

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            KL   L G+ +S VACGEWHTA+VS  G+LFTYGDGTFG LGHGNL ++SQPKEVESL G
Sbjct: 419  KLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNG 478

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            L VKSVACG WHTAAIVDIM+DR K  +  GKLFTWGD DKG+LGH D ERKLLPTCV  
Sbjct: 479  LCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAP 538

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            LVD DF Q SCGRMLTVGLT +G+VYTMGS++HGQLGN  ++D S+ +VEGKLKEEFVK 
Sbjct: 539  LVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKA 598

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            ISSGSYHVA LTS G VYTWGK A+GQLGLGDS +R  PTFVEAL D+QVES+ CGS+ T
Sbjct: 599  ISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFT 658

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
            AAICLH+SI+  DQSSC  C++PFGF RKKHNCY+CGL+FC  CS+KK  NA+L PNK K
Sbjct: 659  AAICLHRSITSSDQSSCYGCKLPFGFTRKKHNCYHCGLYFCRMCSSKKTTNAALAPNKSK 718

Query: 661  PSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA-------LTPS 713
              RVCD C+N L++  H  R LKQEN   +N L  Q     E  +++         L+P+
Sbjct: 719  AFRVCDPCFNILRRHIHLDRSLKQENTRTQNSLKQQKVSGFERVDKRSMSSKHSPLLSPT 778

Query: 714  RGQSFTSKQSRNVERKPGECLESASSL-SSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPK 772
            + Q+    QS       GE  +   +  SSG+  WGQVSCP  FK               
Sbjct: 779  K-QNIDEMQSHWKFINQGENQQDLETFTSSGIPSWGQVSCPASFK--------------- 822

Query: 773  TQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQ 832
                                 IA ++++ L  S++ L+EEVQRLR + +NLE QC  G++
Sbjct: 823  ---------------------IAISLDRFLYGSSEKLSEEVQRLRTEVKNLELQCNDGDE 861

Query: 833  KVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLP- 891
            K+Q+C+QKIEEAWS+AREEA KCKAAKEIIKALA+RLHT+SEK+S+  + K+ VDAN P 
Sbjct: 862  KMQKCRQKIEEAWSVAREEAAKCKAAKEIIKALALRLHTISEKVSSRGDTKDEVDANKPH 921

Query: 892  ----------------PKLDTDKHPEVKLPKDRKV-DSLCSSPIVFSNKLKSVYGRELCH 934
                            P   T   PE++LPKDR + DSL +SPIVFSN  KS+YGR    
Sbjct: 922  VTPVYSDSSNFGHFHSPSAVTCLPPELQLPKDRVIGDSLYNSPIVFSNTFKSLYGRPAFR 981

Query: 935  DNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRR 994
              S  +  D    RT  +       K E+ EQYE G+YITFT+LP G KGLKRVRFSRRR
Sbjct: 982  HVSKSTDPDPIANRTSAKNGNANYLKDEWMEQYEAGVYITFTSLPGGHKGLKRVRFSRRR 1041

Query: 995  FTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQM 1028
            F+E+ AERWWEENQV+VYQKYGI+ Y++ N +QM
Sbjct: 1042 FSEREAERWWEENQVIVYQKYGIDGYTDSNHSQM 1075


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score = 1093 bits (2827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1041 (54%), Positives = 732/1041 (70%), Gaps = 63/1041 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE+ LIWYSGQ+EK LRL+ VTKI+ GQ  +  Q Q + +++  SFS+I ANGERSLDLI
Sbjct: 49   DERNLIWYSGQQEKHLRLSVVTKIVQGQEHIRSQRQNESEKECHSFSLICANGERSLDLI 108

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA SWF+ L+A IS C+  R FS LR  +GVQSCVSSPA  +RRK NLGLL+D +
Sbjct: 109  CKDKAQAASWFVALKAVISRCQHPRAFSSLRSCKGVQSCVSSPAGILRRKKNLGLLDDTS 168

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + +QV S+C SP++SLSERCFSDGLS +SD+FYSS S  S    +++    SSP+++ + 
Sbjct: 169  QFTQVHSVCASPTMSLSERCFSDGLSCTSDNFYSSASFLSSTHGVTDSSVASSPYIDPDI 228

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                E    D    KN S   +   + +P + + ++LKDVMIWG G+      G + G V
Sbjct: 229  HGNIESTRIDKEHKKNLSDSYLM-HFTTPHVGKSNVLKDVMIWGGGI------GCLVGIV 281

Query: 242  SQNKTQ--VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
            ++      + +L+PKLLES  MLDV NI+LG KHAALVTK+GEVFCWG+GK GRLG K++
Sbjct: 282  NERFVHPGIYSLVPKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKID 341

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            MD+S PK+V+ L+G++V++V+CGE+ TCALT SGE+YTWG++   ADL+ E R+RS W+P
Sbjct: 342  MDISSPKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIP 401

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            ++L   LDG+ +S VACGEWHTAIVS+ G+LFTYGDGTFGVLGHG+L++ S PKEVESL 
Sbjct: 402  QRLGGPLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLN 461

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
            GL+V+S ACG WHTAAIV++M DR + N+  GKLFTWGD D+GRLGHVD   K++PT VT
Sbjct: 462  GLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVT 521

Query: 480  RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            +LVD+DFVQ SCGRMLTV LT +GKV+ MGSA +GQLGNP A+D+ + +VEG+LK+EFVK
Sbjct: 522  QLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDK-VVIVEGQLKQEFVK 580

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
             IS+GSYHVAVLTS GSVYTWG+   GQLGLGD+++R TP FVEALRDRQV ++ CG S 
Sbjct: 581  VISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSF 640

Query: 600  TAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG 659
            TAAICLHK IS+ DQS+CS CR+PFGF RKKHNCYNCGL FC ACS+KKI NA L P+K 
Sbjct: 641  TAAICLHKPISISDQSTCSGCRLPFGFTRKKHNCYNCGLLFCRACSSKKITNAPLAPSKS 700

Query: 660  KPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFT 719
            K  RVCD C++  Q   HS    K  N + + +L  Q  +S +V E++G  T ++G   +
Sbjct: 701  KAFRVCDQCFDKRQGGAHSVMASKSRNYNTQQVLKHQHKIS-DVTEDRGETTVTQGPMLS 759

Query: 720  SKQSRNVERKPG------------ECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEP 767
              QS   +  P             + +E +SS+  G+ +WGQV CP  F+ +C E  V  
Sbjct: 760  LGQSCYRKSMPSGRKDWKNHQEIQQDVEDSSSMLGGMPQWGQVPCPAMFQINCTENPV-- 817

Query: 768  TPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQC 827
                                          V  D ++S+K+L EEV RLR +A+ LE+QC
Sbjct: 818  ------------------------------VHTDTTKSDKVLLEEVHRLRAEAKRLEEQC 847

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD 887
            ++ N+K+QEC+QKIEE+W +AREEA KCKAAKE+IKALA+RLHT+S K +  +E K G +
Sbjct: 848  ELKNRKIQECRQKIEESWFVAREEAAKCKAAKEVIKALALRLHTISGKDNVGQEGKVGPN 907

Query: 888  ANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVA 947
              +P       H E+K P+D  VDSL +SPIVFS+ LKS +GR L        +++S + 
Sbjct: 908  EFVPNVAPI--HTEMKSPRDVSVDSLSNSPIVFSDTLKSKFGRSL-----FPKIDNSNIN 960

Query: 948  RTEPQQ-KGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEE 1006
            R E QQ       K E+ EQYE G+YITFTTLP G+KGLKRVRFSR+RF+EK AE+WWEE
Sbjct: 961  RAESQQDNNIDGLKAEWVEQYELGVYITFTTLPCGKKGLKRVRFSRKRFSEKEAEKWWEE 1020

Query: 1007 NQVVVYQKYGIEEYSNLNQNQ 1027
            NQV VY KYGIE Y N N +Q
Sbjct: 1021 NQVTVYHKYGIEGYINNNTSQ 1041


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score = 1063 bits (2750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/1029 (55%), Positives = 686/1029 (66%), Gaps = 167/1029 (16%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEKFLIWYSGQ+EKQLRL+S+TKII GQRTVNFQ Q Q +R+ +SFS++YANGERSLDLI
Sbjct: 47   DEKFLIWYSGQEEKQLRLSSITKIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA+SWFLGL+A IS C+  R  S  R   GVQ+C +SPA Y RRKHNLGLLED  
Sbjct: 107  CKDKAQADSWFLGLKAVISRCQHPRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTP 166

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + SQVRSLCGSP+ SLSERCFSDGLS      YS++S  S   ++SN             
Sbjct: 167  KFSQVRSLCGSPTQSLSERCFSDGLS------YSADSFYSSESSVSN------------- 207

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                                              DIL+DVMIWGEG+ GG +GG V    
Sbjct: 208  ---------------------------------NDILRDVMIWGEGIEGGILGGGVYRFG 234

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +QN  Q DALLPKLLES  MLDV+ ISLG KHAALVTK GEVFCWGEG  GRLGHKVNMD
Sbjct: 235  NQNGMQSDALLPKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMD 294

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            +  PK+VE L+G+ V+SVSCGE+QTCALT SGE+YTWG N  G DLVGERR RS W+P +
Sbjct: 295  MGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSR 354

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            L   L+G  +S VACGEWH AIVSTSGQLFTYGDGTFGVLGHG L+++SQPKEVESL GL
Sbjct: 355  LSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGL 414

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
             VK+ ACGPWHTAAIV++  DR K N  GGKLFTWGD DKGRLGH D ERKLLPTCV +L
Sbjct: 415  WVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQL 474

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            VD DFVQ SCGRMLTVGLT LG VYTM     G+LG+   +DR+   V  +L+   V+ I
Sbjct: 475  VDHDFVQVSCGRMLTVGLTCLGTVYTM-----GRLGD--TEDRNSPAVVEELRYRQVESI 527

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            + GS   A +                                                  
Sbjct: 528  ACGSGFTAAI-------------------------------------------------- 537

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
              CLHKSIS  DQS+CS CRM FGF RKKHNCYNCGL FC ACS KK++NASL PNK KP
Sbjct: 538  --CLHKSISSTDQSACSGCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKP 595

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSK 721
             RVCD CY +LQ+I HS RLLK EN SPR LL                +T    QS+  K
Sbjct: 596  FRVCDPCYTYLQRIKHSSRLLKLENHSPRQLL----------------MTQKTSQSYEKK 639

Query: 722  QSRN-VERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSP 780
              +N VE +  + +E  SSLS+GL RWGQV CP  F+ +C E S+               
Sbjct: 640  PFKNQVENQ--QTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSI--------------- 682

Query: 781  LLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQK 840
                               KD  +++K+L EEV+RLR +AR+LEK CQ+ ++K+QECQQK
Sbjct: 683  -----------------ALKDFPDTDKILIEEVERLRSEARSLEKLCQMRSEKIQECQQK 725

Query: 841  IEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHP 900
            ++E WSLAREEA KCKAAKE+IKAL+ RLHT+SEK+S+ ++AK+G+D+ LP  +      
Sbjct: 726  LQETWSLAREEAAKCKAAKEVIKALSSRLHTMSEKLSSERDAKDGIDSKLPQIITR---- 781

Query: 901  EVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASK 960
             V  PK+R++DSLC SPIVFSN L+S+YGR+ C  ++  SVEDS + + +P+Q GTK SK
Sbjct: 782  YVDTPKERQLDSLCGSPIVFSNSLRSMYGRDECQGHTR-SVEDSCLEKIDPRQNGTKPSK 840

Query: 961  LEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEY 1020
            LE+ EQYEPG+YITF TL SGQ+GLKRVRFSR+RFTEK AERWWEENQ+ VYQ YGIE Y
Sbjct: 841  LEWVEQYEPGVYITFITLASGQRGLKRVRFSRKRFTEKEAERWWEENQIGVYQNYGIEGY 900

Query: 1021 SNLNQNQMR 1029
             + +QN+M+
Sbjct: 901  ISSSQNKMK 909


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score = 1042 bits (2694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/1030 (52%), Positives = 717/1030 (69%), Gaps = 62/1030 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE+ LIW SGQ+EK LRL+ VTKI+ G+  +  Q Q + +++  SFS+IYANGE SLDLI
Sbjct: 50   DERNLIWCSGQQEKHLRLSGVTKIVQGEGNIRSQRQNETEKECHSFSLIYANGEHSLDLI 109

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA +WF+GL+A IS C++ + FS LR  +GVQSCVSSP+  +RRK NLGLL+D +
Sbjct: 110  CKDKAQAATWFVGLKAVISRCQQPKAFSSLRSCKGVQSCVSSPSGILRRKKNLGLLDDTS 169

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + +QV S+C SP+LSLSERCFSDGLSY S+ FYSS SS S I  +++   PSSP++  + 
Sbjct: 170  QFTQVHSVCASPTLSLSERCFSDGLSYKSE-FYSSVSSLSSIHGMTDNSVPSSPYINPDI 228

Query: 182  FMKWELNYADTRCPKN-ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
                + +  +    K   S+R + P   S L+   ++LKDVM+WG G+  G + G V+  
Sbjct: 229  HSNIKTSRFEKEYKKELSSNRSIMPP-ASALVG-NNVLKDVMVWGGGI--GCLVGIVNER 284

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
              QN   + +L+PKLLES  MLDVQN++LG  HAA+VTK+GEV+CWG+GK GRLG +++M
Sbjct: 285  FVQN--SIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDM 342

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            D+S PK+V+ LS I V++V+CGE+ TCALT SGE+Y WG++   +DLV E R RS WL  
Sbjct: 343  DISSPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTH 402

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            KL   ++G+ +S +ACGEWHTAIVS+ G+LFTYGDGTFGVLGHG+  + S PKEVESL+G
Sbjct: 403  KLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKG 462

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            L V+SVACG WHTAAI++I  +R K N   GKLFTWGDAD+GRLGH D   KL+PTCV++
Sbjct: 463  LCVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQ 522

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            LVD+DFVQ SCGRM+T+ LT +GKV+ MGSA +GQLGNP  KDR++ VVEG LK+E+VK 
Sbjct: 523  LVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV-VVEGMLKQEYVKM 581

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            IS GSYHVAVLTS GSVYTWGK  NG+LGLGD++ R TP FVEALRDRQV+++ CG S T
Sbjct: 582  ISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFT 641

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
             AICLHK IS+ DQSSC+ CR+PFGF RKKHNCYNCGL FC +CS+KK++NASL P K K
Sbjct: 642  VAICLHKPISISDQSSCNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVMNASLAPVKSK 701

Query: 661  PSRVCDTCYNHLQKITHSGRL--LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
              RVCD+C+N  Q  +    +   K  N + + +     +++ +V E++G    + G   
Sbjct: 702  AFRVCDSCFNRKQGSSEHPAMDSSKSRNYNNQQIQRHHQNMTGDVTEDRGETNVTNGPML 761

Query: 719  TSKQS---------RNVERKPGECLESASSLSSGLQ-RWGQVSCPIRFKTHCHEKSVEPT 768
            +  Q+         R V +   +  +S+S L + +Q   GQV    +F+ +C E SV   
Sbjct: 762  SLSQTCYRKNMPSGRKVWKSQQDLEDSSSKLGNVIQCGQGQVPYSAQFRINCTENSV--- 818

Query: 769  PIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQ 828
                     H                    E + ++S+K+L EEVQRLR +A+ LEKQC+
Sbjct: 819  --------VH--------------------ETETTKSDKLLMEEVQRLRAEAKRLEKQCE 850

Query: 829  IGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDA 888
            + NQ++QECQQK+EE+WS+A++EA KCKAAKE+IKALA+RLHT+S K +   E K G+  
Sbjct: 851  LKNQEIQECQQKVEESWSVAKDEAAKCKAAKEVIKALALRLHTISGKDNHGLEQKAGLQE 910

Query: 889  NLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVAR 948
             LP       H +   P++  +DSL +SPI+FS+ LKS +GR +         +D+ + +
Sbjct: 911  LLPNLAPI--HTDTNSPRNANMDSLSNSPIIFSSALKSKFGRSILLK------KDNNLTK 962

Query: 949  TEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
             E QQ+   A K+E+ EQYE G+YIT T  PSG+KGLKRVRFSR+RF++K AERWWEENQ
Sbjct: 963  AESQQE--NALKVEWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWWEENQ 1020

Query: 1009 VVVYQKYGIE 1018
              V+ KY IE
Sbjct: 1021 TKVHHKYEIE 1030


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score = 1026 bits (2654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1034 (52%), Positives = 711/1034 (68%), Gaps = 67/1034 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE+ L+W SG++EK LRL+ VTKI+ G+  +  Q Q   +++  S S+IYANGE  LDLI
Sbjct: 50   DERNLVWCSGKQEKHLRLSGVTKIVQGEGNIRSQRQNGTEKECHSSSLIYANGEHPLDLI 109

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK QA +WF+GL+A IS C++ + FS LR  +GVQ CVSSP+  +RRK NLGLL+DA+
Sbjct: 110  CKDKAQAATWFVGLKAVISRCQQPKAFSSLRSCKGVQGCVSSPSGILRRKKNLGLLDDAS 169

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + +QV S+C SP+LSLSERCFSDGLSY SD FYSS SS S I  +++   PSSP++  + 
Sbjct: 170  QFTQVHSVCASPTLSLSERCFSDGLSYKSD-FYSSASSLSSIHGITDNSVPSSPYINPDI 228

Query: 182  FMKWELNYADTRCPKN-ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
                + +  +    K   S+R + P   S L+   ++LKDVMIWG G+  G + G V+  
Sbjct: 229  HSNIKTSRFEKEYKKELSSNRSIMPP-ASALVG-NNVLKDVMIWGGGI--GCLVGIVNER 284

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
              QN   + +L+PKLLES  MLDVQN++LG  HAA+VTK+GEV+CWG+GK GRLG +++M
Sbjct: 285  FVQN--SIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDM 342

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            D+S PK+V+ LS I V+ V+CGE+ TCALT SG++YTWG ++  +DLV E R RS WL  
Sbjct: 343  DISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDVYTWGKDS-CSDLVDEGRIRSQWLTH 401

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            K    ++G+ +S +ACGEWHTAIVS+ G+LFTYGDGTFGVLGHGN  + S PKEVESL+G
Sbjct: 402  KFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKG 461

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            L V+SVACG WHTAAI+++  +R K N   GKLFTWGDAD+GRLGH D   KL+PTCV++
Sbjct: 462  LCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQ 521

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            LVD+DFVQ SCGRM+T+ LT +GKV+ MGSA +GQLGNP  KDR++ VVEG LK+E+VK 
Sbjct: 522  LVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV-VVEGMLKQEYVKM 580

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            IS GSYHVAVLTS GSVYTWGK  NG+LGLGD++ R TP FVEALRDRQV+++ CG S T
Sbjct: 581  ISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFT 640

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
             AICLHK IS+ DQSSC+ CR+PFGF RKKHNCYNCGL FC +CS+KK++NASL P K K
Sbjct: 641  VAICLHKPISISDQSSCNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVLNASLAPVKSK 700

Query: 661  PSRVCDTCYNHLQ--KITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
              RVC++C+N  Q      S    K  N + + +     ++  +V E++G    + G   
Sbjct: 701  AFRVCESCFNKKQGSSERSSMDSSKSRNCNNQQIQRHHQNMIGDVTEDRGETNVTNGPLL 760

Query: 719  TSKQSRNVERKPG-------------ECLESASSLSSGLQ-RWGQVSCPIRFKTHCHEKS 764
            +  Q+   +  P              +  +S+S+L S +Q   GQV    +F+ +C E S
Sbjct: 761  SLSQTCYRKNMPSGRKVWKIQHESQRDVEDSSSTLGSVIQCGQGQVPYSAQFRINCTENS 820

Query: 765  VEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLE 824
            V            H                    E + ++S+K+L EEVQRLR +A+ LE
Sbjct: 821  V-----------VH--------------------ETETTKSDKLLIEEVQRLRAEAKRLE 849

Query: 825  KQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKE 884
            KQC++ NQ++QECQQK+EE+WS+A+EEA KCKAAKE+IKALA+RLHT+S K +   E K 
Sbjct: 850  KQCELKNQEIQECQQKVEESWSVAKEEAAKCKAAKEVIKALALRLHTISGKDNHGLEQKA 909

Query: 885  GVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDS 944
            G+   LP       H ++  P++   DSL +SPI+FS+ LKS +GR +         +D+
Sbjct: 910  GLQEFLPNLAPI--HTDMNSPRNANTDSLSNSPIIFSSALKSKFGRSILLK------KDN 961

Query: 945  KVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWW 1004
             + + E QQ+   A K+E+ EQYE G+YIT T  PSG+KGLKRVRFSR+RF++K AERWW
Sbjct: 962  NLTKAESQQE--NALKVEWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWW 1019

Query: 1005 EENQVVVYQKYGIE 1018
            EENQ  V+ KY IE
Sbjct: 1020 EENQTKVHHKYEIE 1033


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1005

 Score =  984 bits (2543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/1025 (52%), Positives = 677/1025 (66%), Gaps = 74/1025 (7%)

Query: 1    MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
            MDEK+LIWYSG++E+QLRL+SV  I+ GQ T NFQ Q Q DRK+QSFS+IYANGE +LDL
Sbjct: 47   MDEKYLIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDL 106

Query: 61   ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
            ICKDK QA+SWF GLRA I+     R  + LR  RG QSC++SPA ++RRK NLGLLE+ 
Sbjct: 107  ICKDKAQADSWFKGLRAVITKHHNIRNSANLRTSRGAQSCINSPAGFMRRKQNLGLLEET 166

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
             +L+Q+RSLCGSPS  L ERC S+GLS SSDSF  S++           + P S +  T+
Sbjct: 167  PDLTQIRSLCGSPSTLLEERCLSNGLSCSSDSFAESDA-----------LGPVSSYNGTD 215

Query: 181  -NFMKWELNYADTRCPKNESHRLVT---PTYGSPLIERKDILKDVMIWGEGVLGGDIGGA 236
             +F   +     T   +  S R      P+  +  I R ++LKD+MIWG       I G 
Sbjct: 216  YDFRNSDCERTGTELCRFSSQRFAASPPPSIITQPITRSNVLKDIMIWGA------ITGL 269

Query: 237  VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
            +DGS +QN    DAL PKLLESA M DVQ+ISLGAKHAALVT++GEVFCWG G  G+LG 
Sbjct: 270  IDGSKNQN----DALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGL 325

Query: 297  KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
            KVN+D+  PK VE L  + V+SV+C + QTCA+T+SGE+Y WG +    +  G     S 
Sbjct: 326  KVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSG-----SQ 380

Query: 357  WLPRKLFDTLDG-VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            +L RK+ D L G + +  VACG WHTA+V++SGQLFTYG  TFGVLGHG+L++V++PKEV
Sbjct: 381  FLTRKISDVLGGSLSIFSVACGAWHTAMVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEV 440

Query: 416  ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVDGERKLL 474
            ESLR +KV SV+CGPWHTAAIV+  +DR   NA   GKLFTWGD DKGRLGH D +RKL+
Sbjct: 441  ESLRRMKVISVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLV 500

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCVT L+D DF++ SCG  LTV L+  G VYTMGS++HGQLG P+AKD+SI VV G L 
Sbjct: 501  PTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSIHGQLGCPRAKDKSINVVLGNLT 560

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             +FVK I+SGS+HVAVLTS G+VYTWGK  NGQLGLGD ++R +P  VE L DR VES+ 
Sbjct: 561  RQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRDRNSPVLVEPLGDRLVESIA 620

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CG ++TAAICLHK IS+ DQ++CS C+  FGF RKKHNCYNCGL FC+ACS+KK +NASL
Sbjct: 621  CGLNLTAAICLHKEISLTDQTACSSCKSAFGFTRKKHNCYNCGLLFCNACSSKKAVNASL 680

Query: 655  TPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
             PNK K SRVCD+C++HL  IT   R +K EN +PR  L     ++  V E+        
Sbjct: 681  APNKSKLSRVCDSCFDHLWSITEFSRNVKTENHTPRMQL-----VTRRVSED-------- 727

Query: 715  GQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQ 774
               +T K++ N  +     +  A+  S G  RWGQVS P  F     +K    +PI    
Sbjct: 728  ---WTEKEAENQMQN----VPQANRFSDGQPRWGQVSVPSLFH---FDKFSTSSPI-NLS 776

Query: 775  MSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKV 834
            +S   P   KIS                SESNK+L EE++RL+ + RNL+KQC++GN+K+
Sbjct: 777  VSARRPSSTKISTS--------------SESNKILIEEIERLKAEIRNLQKQCELGNEKM 822

Query: 835  QECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKL 894
            +ECQQ++++ W +A+EEAEK KAAKEIIKALA +L T  EK S     K G+  N P ++
Sbjct: 823  EECQQELDKTWEVAKEEAEKSKAAKEIIKALASKLQTNKEKPS--NPPKTGIACN-PSQV 879

Query: 895  DTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDS-KVARTEPQQ 953
                   + +P    + +  S P       K V        N    V+ S  + RT   Q
Sbjct: 880  SPIFDDSMSIPYLTPITTARSHPENKQLVEKCVTKSSNRESNIKLLVDASPAITRTGYLQ 939

Query: 954  KGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQ 1013
              T+ S  E  EQYEPG+YITFT LP GQK LKRVRFSR+RF+EK A+ WWEE QV VY 
Sbjct: 940  NETQDSTAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQIWWEEKQVFVYN 999

Query: 1014 KYGIE 1018
            KY  E
Sbjct: 1000 KYDAE 1004


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator of
            chromosome condensation (RCC1) domains and a PF|01363
            FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  966 bits (2498), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/1030 (51%), Positives = 679/1030 (65%), Gaps = 83/1030 (8%)

Query: 1    MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
            MDEK+LIWYSG++E+QLRL+SV  I+ GQ T NFQ Q Q DRK+QSFS+IYANGE +LDL
Sbjct: 47   MDEKYLIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDL 106

Query: 61   ICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
            ICKDK QA+SWF GLRA I+     R     R  RG QSC++SPA ++RRK NLGLLE+ 
Sbjct: 107  ICKDKAQADSWFKGLRAVITKHHNIRNSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEET 166

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
             +++Q+RSLCGSPS  L ERC S+GLS SSDSF  S++           + P S + ET+
Sbjct: 167  PDVTQIRSLCGSPSTLLEERCLSNGLSCSSDSFAESDA-----------LGPVSSYYETD 215

Query: 181  NFMKWELNYAD-TRCPKNESHRLVTPTYGS--PL------IERKDILKDVMIWGEGVLGG 231
                ++   +D  R   +E  R  +  + +  PL      + R ++LKD+MIWG      
Sbjct: 216  ----YDFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPVTRSNVLKDIMIWGA----- 266

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             I G +DGS +QN    DAL PKLLESA M DVQ+ISLGAKHAALVT++GEVFCWG G  
Sbjct: 267  -ITGLIDGSKNQN----DALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNS 321

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LG KVN+D+  PK VE L  + V+SV+C + QTCA+T+SGE+Y WG +    +  G  
Sbjct: 322  GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSG-- 379

Query: 352  RSRSHWLPRKLFDTLDG-VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
               S +L RK+ D L G + V  VACG WHTAIV++SGQLFTYG GTFGVLGHG+L++V+
Sbjct: 380  ---SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVT 436

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVDG 469
            +PKEVESLR +KV SV+CGPWHTAAIV+   DR   NA   GKLFTWGD DKGRLGH D 
Sbjct: 437  KPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADS 496

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            +RKL+PTCVT L+D DF++ SCG  LTV L+  G VYTMGS++HGQLG P+AKD+S+ VV
Sbjct: 497  KRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVV 556

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
             G L  +FVK I+SGS+HVAVLTS G+VYTWGK  NGQLGLGD ++R +P  VE L DR 
Sbjct: 557  LGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRL 616

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            VES+ CG ++TAAICLHK IS+ DQ++CS C+  FGF R+KHNCYNCGL FC+ACS+KK 
Sbjct: 617  VESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKA 676

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            +NASL PNK K SRVCD+C++HL  IT   R +K +N +PR  +     ++  V E+   
Sbjct: 677  VNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNHTPRMQM-----VTRRVSED--- 728

Query: 710  LTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTP 769
                     T KQS N  +     L  A+  S G  RWGQVS P  F+            
Sbjct: 729  --------LTEKQSENEMQN----LPQANRSSDGQPRWGQVSGPSLFRFD---------- 766

Query: 770  IPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQI 829
                ++ST S L   +S        +ST     SESNK+L EE++RL+   +NL++QC++
Sbjct: 767  ----KISTSSSLNLSVSARRT----SSTKISTSSESNKILTEEIERLKAVIKNLQRQCEL 818

Query: 830  GNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDAN 889
            GN+K++ECQQ++++ W +A+EEAEK KAAKEIIKALA +L    EK S     K G+  N
Sbjct: 819  GNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALASKLQANKEKPS--NPLKTGIACN 876

Query: 890  LPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDS-KVAR 948
             P ++       + +P    + +  S      +  K V        N    V+ S  + R
Sbjct: 877  -PSQVSPIFDDSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIKLLVDASPAITR 935

Query: 949  TEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
            T   Q  T+ S  E  EQYEPG+YITFT LP GQK LKRVRFSR+RF+EK A+RWWEE Q
Sbjct: 936  TGYLQNETQDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQ 995

Query: 1009 VVVYQKYGIE 1018
            V+VY KY  E
Sbjct: 996  VLVYNKYDAE 1005


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
            vinifera]
          Length = 1107

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/1056 (42%), Positives = 642/1056 (60%), Gaps = 58/1056 (5%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 53   DESVLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLG------ 115
            CKDK +AE WF GL+A IS     R +       G+ S  +SP +Y RR   L       
Sbjct: 111  CKDKDEAEVWFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSA 170

Query: 116  --LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              L +D  +  ++ S   SP  S+ E+ FSD + Y+     F+ S+S+S  + +LS+  +
Sbjct: 171  DSLQKDGGDHLRLHSPYESPPKSVMEKAFSDVILYAVPPKGFFPSDSASGSVHSLSSGGS 230

Query: 172  PS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             S   HM+        +     R   + +    +   G    +  D L DV IWGEG   
Sbjct: 231  DSVHGHMKA-------MTMDAFRVSLSSAVSSSSQGSGH---DDGDALGDVFIWGEGTGD 280

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG      S    ++D+LLPK LESAV+LDVQNI+ G +HAALVTK+GE+F WGE  
Sbjct: 281  GVLGGGSHRVGSCFGMKMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEES 340

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
             GRLGH V+ DV  PKL++ LS  N++ V+CGE+ TCA+T SG++YTWG   +   L+G 
Sbjct: 341  GGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 400

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                SHW+P+++   L+G+ VS ++CG WHTA+V++SGQLFT+GDGTFGVLGHG+ ++VS
Sbjct: 401  GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVS 460

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            +P+EVESL+G +    ACG WHTAA+V+IMV +   SN   GKLFTWGD DKGRLGH D 
Sbjct: 461  KPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDK 520

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E KL+PTCV  LVD +F + +CG  LTV LT  G VYTMGS V+GQLGNP+A  +  T V
Sbjct: 521  EAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRV 580

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EGKL + FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEAL+D+Q
Sbjct: 581  EGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQ 640

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CG++ TA ICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+KK 
Sbjct: 641  VKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKS 700

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + AS+ PN  KP RVCD C++ L+K   +     Q   S R + N QG L+E + +++  
Sbjct: 701  LKASMAPNPNKPYRVCDNCFSKLRKAIETD-ASSQSAVSRRGVTN-QG-LNELIDKDEKL 757

Query: 710  LTPSRGQ--SFTS----KQSRNVERKPGECLESASS----LSSGLQRWGQVSCPIRFKTH 759
             + SR Q   F+S    KQ+ +   K  + LE  SS    + +G  +WG     +     
Sbjct: 758  DSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNGGSQWGGALKSLN-PVF 816

Query: 760  CHEKSVEPTPIPKTQM--STHSPLLRKISLGSNFIPIAS--------TVEKDLSESNKML 809
               K      +P +++   T SP+ R+ S      P  +         V  D   +N  L
Sbjct: 817  GSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTNDSL 876

Query: 810  NEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
            ++EV +LR Q  NL ++ Q+   +++   ++++EA ++A EE  +CKAAKE+IK+L  +L
Sbjct: 877  SQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEETARCKAAKEVIKSLTAQL 936

Query: 870  HTLSEK--ISAAKEAKEGVDANL---PPKLDTDKHPEVKLP---KDRKVDSLCSSPIVFS 921
              ++E+  + AA+  K     +L   P   D       ++      ++ D   S+  + S
Sbjct: 937  KDMAERLPVGAARNTKSPSFTSLGSNPASSDLSSLSIDRINGQITSQEPDLNGSNGQLLS 996

Query: 922  NKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSG 981
            N   +   R   H N  G +E + +      ++    +  E+ EQ EPG+YIT T+LP G
Sbjct: 997  NGSSTTNNRSSGH-NRLGHLE-ATIRNGSRTKESEHRNDNEWVEQDEPGVYITLTSLPGG 1054

Query: 982  QKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             K LKRVRFSR+RF+EK AE+WW EN+  V+++Y +
Sbjct: 1055 VKDLKRVRFSRKRFSEKQAEQWWAENRARVHERYNV 1090


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/1059 (41%), Positives = 629/1059 (59%), Gaps = 69/1059 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYSG++EK LRL+S+T+I+ GQRT NFQ  P+ +++ QSFS+IY N +RSLDLI
Sbjct: 46   DETHLIWYSGKEEKSLRLSSITRIVPGQRTANFQRYPRLEKEYQSFSLIYGN-DRSLDLI 104

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH------NLG 115
            CKDK +AE WF+GL+A +S  + SR     R + G  S  +SPA++ R         N+ 
Sbjct: 105  CKDKDEAEVWFVGLKALVSGGQLSRLRFDSRSECGPPSDSNSPATWSRISPASSPFGNVD 164

Query: 116  LL--EDATELSQVRSLCGSPS-LSLSERCFSDG---LSYSSDSFYSSESSSSQIQNLSNI 169
             L  +D  E  + +S  GSP   +L +R FS G   L  SS  F  + S++  + +  + 
Sbjct: 165  NLPRQDGREAFRFQSPYGSPPRYALQQRSFSPGAPSLDSSSKLFLENASTAGSLHSDMS- 223

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLI-----ERKDILKDVMIW 224
               S P     +             P + + R+   +  S        E  D L DV +W
Sbjct: 224  ---SEPAASVLHLRGGAAAATSAAIPLDANFRVSMSSAVSSSSQGSGQEEGDALGDVFLW 280

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GE V  GD G            + D+LLPK LESAV+LDV +I+ G +HAALVTK+GEVF
Sbjct: 281  GESVGSGDGG-----------IKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVF 329

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
            CWG+   GRLGH V++DV+ PKLVE L+  N + V+CGE+ +CA+T SG+++TWG   H 
Sbjct: 330  CWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHS 389

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
              L+G     SHW P+++   L+G+RVS VACG WHTA+V+++GQLFT+GDGTFGVLGHG
Sbjct: 390  YGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG 449

Query: 405  NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
            + ++V+ PKEVESL+GLK   VACG WHTAA+V++MV    +    GKLFTWGD DKGRL
Sbjct: 450  DKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRL 509

Query: 465  GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            GH D E+KL+PTCV  LVD++F Q +CG  LTV LT  G+V+TMGS+++GQLG+ +A  +
Sbjct: 510  GHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGK 569

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
               +VEG+L E FV+ I+ G+YHVAVLT+   VYTWGK ANG+LG GD  +R TPT VEA
Sbjct: 570  LPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEA 629

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSAC 644
            L+++QV+SV CGS  TAAICLHK +S  DQS CS CR PFGF RK+HNCYNCG  FC +C
Sbjct: 630  LKEKQVKSVACGSGFTAAICLHKWVSGADQSLCSGCRQPFGFTRKRHNCYNCGHAFCHSC 689

Query: 645  STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSP--RNLLNLQGSLSEE 702
            S +K + ASL PN  KP RVCD C+  L+K                 ++++  QG     
Sbjct: 690  SARKALKASLAPNPAKPYRVCDPCFVKLKKGGEVLLPGGGGGAGVPRKSMVATQG----- 744

Query: 703  VKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHE 762
              ++     P + +    +Q +  +++P   L  A   SS +Q WG V  P  F  +   
Sbjct: 745  --QQGSVKKPRKLELQPEQQQQQQQQQPQYHLNQALQFSSSVQPWGAVDIPSVFNPYASG 802

Query: 763  KS-------VEPTPIPKTQMSTH--SPLLRKISLGSNFIPIAS--------TVEKDLSES 805
             S       V    +P +++++   SPL R+ S   +  P  +        T+  +L   
Sbjct: 803  GSGSSLRPLVSALSVPTSRVASRSVSPLSRRPSPPRSATPTPTLAGLATPKTLVDELKRE 862

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
            N ++N EV +L++Q  +L ++    + +++   Q+++EA ++A EE+ KC+AAKE+IK L
Sbjct: 863  NDVVNHEVVKLKEQVEDLNRKLLQQDAELRRSAQQVQEALAIAGEESAKCQAAKEVIKQL 922

Query: 866  AVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPI---VFSN 922
              +L  ++E++ A     +        +   D+ P    P    +DSL  +       + 
Sbjct: 923  TAQLKEMAERVPAGLHRHKQQQQQ---QFHHDQLPNGVHPPVTTLDSLSVTDDEGGYSTA 979

Query: 923  KLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLE----YAEQYEPGIYITFTTL 978
             L+   G    +  S     +   +  + QQ  ++    E    + EQ +PG+Y+T   L
Sbjct: 980  HLRYSLGALTPNLRSIAPDTNGLASPAQQQQASSRRPSPEPENDWVEQDQPGVYLTLCVL 1039

Query: 979  PSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            P+G + LKRVRFSR+RF+EK AE+WW+EN+  V+++Y I
Sbjct: 1040 PAGGRELKRVRFSRKRFSEKQAEQWWQENRQRVHEQYNI 1078


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/1059 (42%), Positives = 645/1059 (60%), Gaps = 65/1059 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   ERSLDLI
Sbjct: 47   DESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NERSLDLI 104

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLG------ 115
            CKDK +AE WF GL+A I+   + R +       G+ S  +SP +Y RR   L       
Sbjct: 105  CKDKDEAEVWFSGLKALITRSHQ-RKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSN 163

Query: 116  --LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              L +D  +L ++ S   SP  +  ++ FSD + Y+     F+ S+S+S+ + +LS+  +
Sbjct: 164  DSLQKDGDQL-RLHSPYESPPKNGLDKAFSDVILYAVPPKGFFPSDSASASVHSLSSGGS 222

Query: 172  PS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             S   HM+        +     R   + +    +   G    +  D L DV IWGEG   
Sbjct: 223  DSVRGHMKA-------MAMDAFRVSLSSAVSSSSQGSGH---DDSDALGDVFIWGEGTGD 272

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG    + S    ++D+LLPK LES V+LDVQNI+ G +HAALVTK+GEVF WGE  
Sbjct: 273  GVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEES 332

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
             GRLGH V+ DV  PKL++ LS IN++ V+CGE+ TCA+T SG++YTWG   +   L+G 
Sbjct: 333  GGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 392

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                SHW+P+++   L+G+ VS ++CG WHTA+V++SGQLFT+GDGTFGVLGHG+ ++VS
Sbjct: 393  GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVS 452

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GKLFTWGD DKGRLGH D 
Sbjct: 453  IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 512

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGNP+A  +    V
Sbjct: 513  EAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 572

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EG+L + FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R  P+ VEAL+D+Q
Sbjct: 573  EGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 632

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CG++ TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+KK 
Sbjct: 633  VKSIACGTNFTAAICLHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKS 692

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + AS+ PN  KP RVCD CY+ L+K   +     Q + S R  +N  GS +E + +++  
Sbjct: 693  LKASMAPNPNKPFRVCDNCYSKLRKAIETD-ASSQSSVSRRGSVN-HGS-NEFIDKDEKL 749

Query: 710  LTPSRGQ--SFTS----KQSRNVERKPGECLESASSLS---SGLQRWGQVSCPIRFK-TH 759
             + SR Q   F+S    KQ+ N  ++  +   ++S +S   +G  +WG ++    F    
Sbjct: 750  DSRSRAQLARFSSMESLKQAENRSKRNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPMF 809

Query: 760  CHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSESNK 807
               K      +P +++ + +                  +LG    P    V  D   +N+
Sbjct: 810  GSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSP--KLVVNDAKRTNE 867

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
             L++EV +LR Q  +L ++ Q+   +++   ++++EA ++A EE  KCKAAKE+IK+L  
Sbjct: 868  SLSQEVNKLRAQVESLTRKAQVQEVELERAAKQLKEAIAIAGEETAKCKAAKEVIKSLTA 927

Query: 868  RLHTLSEK--ISAAKEAKEGVDANLPPKLDTDKHPEVKLPK------DRKVDSLCSSPIV 919
            +L  ++E+  + AA+  K     +  P   ++        +       ++ D+   +  +
Sbjct: 928  QLKDMAERLPVGAARNIKSPSFTSFGPTPASNDISSAAADRLNGQIASQEPDTNGLNSQL 987

Query: 920  FSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKA-SKLEYAEQYEPGIYITFTTL 978
             SN   +   R   H N  G VE     R   + K T+   + E+ EQ EPG+YIT T+L
Sbjct: 988  LSNGSTTTSMRNSGH-NKQGHVE--ATVRNGSRTKETETHHEAEWVEQDEPGVYITLTSL 1044

Query: 979  PSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            P G K LKRVRFSR+RF+EK AE+WW EN+  VY++Y +
Sbjct: 1045 PGGVKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNV 1083


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
            [Brachypodium distachyon]
          Length = 1005

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/1031 (42%), Positives = 589/1031 (57%), Gaps = 97/1031 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEK LIWYS ++EK L L+ V+ +++GQ+T                             I
Sbjct: 47   DEKMLIWYSKEREKHLSLSYVSSVVLGQKT-----------------------------I 77

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKD+ Q E W+LGL A +S+             R + SC SSP SYI++K  L  + D  
Sbjct: 78   CKDREQVECWYLGLTALLSALYSPLLLVDSTSSRRINSCTSSPPSYIQQKSRLFSVHDTR 137

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            + +QV SL GSP L +  +     L  S       + + S +       TP   +    +
Sbjct: 138  KFTQVHSLYGSPRL-IQNKLSKSNLDCSEPFVSPRQRTWSDLDFYMEKFTPEMINRVKNS 196

Query: 182  FMKWELNYAD-------TRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIG 234
            F   +L  AD       T+ PK      + P+ GS +    D LKD+ +W      GD+ 
Sbjct: 197  FQ--DLTVADTIKEQGITQMPK------LKPSEGSHVAYGTDSLKDIFVW------GDVL 242

Query: 235  GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
            G+V      +K  V   LP+LL S  +LDVQN+S G KHAA+VTK+GEVF WG+   GRL
Sbjct: 243  GSVLDDRDTSKANVS--LPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRL 300

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GHKV++ V  PK++E L+  +V++++ G   TCAL  SGE++ WG   H   +  ++  R
Sbjct: 301  GHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQR 360

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            S W P KLF  L+GV V K+ACG+WHTAI+S+SGQLFTYGDGTFGVLGHG+  +V++PKE
Sbjct: 361  SQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKE 420

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            VESL+GL+VK+VACGPWHTAAIV+I+    KSNA  GKLFTWGDAD+G+LGH D E KL+
Sbjct: 421  VESLKGLRVKAVACGPWHTAAIVEIL-GTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV 479

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV  L D DF Q SC + LTV LT  G V+T+GS  HGQLG+ +  D SI  VEG LK
Sbjct: 480  PTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLK 539

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ ISSGS HVAVLT  G V+TWGK   GQLGLG+  +R +PT VEAL D+QV+S+ 
Sbjct: 540  TEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIA 599

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CGS+ T A+CLH+SIS  DQS CS+CR+ F F RKKHNCYNCG  FC++CS  K+  A+L
Sbjct: 600  CGSNFTVAVCLHRSISGKDQSVCSRCRLSFSFARKKHNCYNCGSMFCNSCSNNKVSRAAL 659

Query: 655  TPNKGKPSRVCDTCYNHLQKI----THSGRL-LKQENQSPRNLLNLQGSLSEEVKE---- 705
             P++ K  RVCD C+  LQK     T S RL +++E   P  +      LS   KE    
Sbjct: 660  GPDRNKRYRVCDACFTQLQKNEECGTVSSRLTIEKEEAFPTEIRAYTPKLSRIFKEANSI 719

Query: 706  -EKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKS 764
             EK AL     Q       RN +    + L         +QRWGQV CP +F+  C   S
Sbjct: 720  MEKMALAQGYHQ-------RNQDLAAPDQLR--------IQRWGQVECPSQFR--CARNS 762

Query: 765  VEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLE 824
            +      K Q           S+ +     AS+++ +L  + K+L EEV++L+     L 
Sbjct: 763  IPCCSTSKEQTVDE-------SVPAKSAQSASSLKAELDSTEKILLEEVKQLQAHVTTLT 815

Query: 825  KQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKE 884
            +QC+  + KVQ C+QK+EE W + R+EA KCKAAKEIIK L  + + LS KI   K +  
Sbjct: 816  EQCRYRSLKVQLCKQKVEETWLIVRDEAAKCKAAKEIIKVLTNQRNILSRKILVGKHSYS 875

Query: 885  GVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDS 944
                 +P  +   +  + +LP     D     P++   K + +      H N  G+   S
Sbjct: 876  --SETVPSHMTIGQPVKAELP-----DPPDKHPVI--GKFRRLSSIRDHHRNGRGTYNAS 926

Query: 945  KVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWW 1004
             +   E              EQ E G+Y+T  T PSG KG+KR+RFSR+ F EK A++WW
Sbjct: 927  NIYAEEADATIPPIDSNGVVEQIERGVYVTIVTSPSGNKGIKRIRFSRKHFGEKEAQKWW 986

Query: 1005 EENQVVVYQKY 1015
            E N+  V++KY
Sbjct: 987  EANESRVFKKY 997


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/1061 (42%), Positives = 637/1061 (60%), Gaps = 71/1061 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 58   DESVLIWFSGKEEKHLRLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 115

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNLG---- 115
            CKDK +AE WF GL+A IS    R+SRT S      G+ S V+SP +Y RR   L     
Sbjct: 116  CKDKDEAEVWFSGLKALISRSHHRKSRTES---RSDGILSEVNSPRTYTRRSSPLNSPFG 172

Query: 116  ----LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNI 169
                L +DA  L ++ S   SP  +  ++ FSD + Y+     F+ S+S+S  + +LS+ 
Sbjct: 173  SNDSLQKDADHL-RIHSPYESPPKNGLDKTFSDVVLYAVPPKGFFPSDSASGSVHSLSSG 231

Query: 170  ITPS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGV 228
             + S   HM+      +       R   + +    +   G    +  + + DV IWGEG 
Sbjct: 232  GSDSVHGHMKAVAMDAF-------RVSLSSAVSSSSQGSGH---DDGEAMGDVFIWGEGT 281

Query: 229  LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
              G +GG      S    ++D+LLPK LESAV+LDVQNI+ G +HAALVTK+GE+F WGE
Sbjct: 282  GDGVLGGGTHRVGSFFGVKMDSLLPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGE 341

Query: 289  GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
               GRLGH V+ DV  P+L+E LS  N++ V+CGE+ TCA+T SG++YTWG   +   L+
Sbjct: 342  ESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 401

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G     SHW+P+++   L+G+ VS ++CG WHTA+VS++GQLFT+GDGTFGVLGHG+ ++
Sbjct: 402  GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS 461

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHV 467
            +S P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GKLFTWGD DKGRLGH 
Sbjct: 462  ISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 521

Query: 468  DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            D E KL+PTCV+ LV+ +F Q +CG  LT+  T  G VYTMGS V+GQLGNP++  +   
Sbjct: 522  DKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPA 581

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
             VEGKL    V+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ ++  P+ VEAL+D
Sbjct: 582  RVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKD 641

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            +QV+S+ CG++ TAAICLHK +S  DQS CS CR+P  F+RK+HNCYNCGL +C +CS+K
Sbjct: 642  KQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPLNFKRKRHNCYNCGLVYCHSCSSK 701

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEK 707
            K + AS+ PN  K  RVCD CYN L+K   +     Q + S R  +N QG  SE + +++
Sbjct: 702  KSLKASMAPNPNKAYRVCDNCYNKLRKAMETD-ASSQSSVSRRGSVN-QGP-SEFIDKDE 758

Query: 708  GALTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRFK- 757
               T SR Q        S    +SR+   K  E   S  S + +G  +WG  +    F  
Sbjct: 759  KLDTRSRAQLARFSSMESLKQAESRSKRNKKLEFNSSRVSPVPNGGSQWGAFNISKSFNP 818

Query: 758  THCHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSES 805
                 K      +P +++ + +                  +LG    P    V  D   +
Sbjct: 819  MFASSKKFFSASVPGSRIISRATSPISRRPSPPRSTTPTPTLGGLTSP--KIVVDDAKRT 876

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
            N+ L++EV +LR Q  NL  + Q+   +++   ++++EA ++A EE  KCKAAKE+IK+L
Sbjct: 877  NESLSQEVLKLRAQVENLSHKTQLQEVELERITERLKEARAIAGEETAKCKAAKEVIKSL 936

Query: 866  AVRLHTLSEK--ISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPI----- 918
              +L  ++E+  + AA+  K  + A+      ++   +V         S C  P      
Sbjct: 937  TAQLKDMAERLPVGAARSIKSPLFASFGSSPTSN---DVSTIDCLNGQSTCQEPDANGLH 993

Query: 919  --VFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
              + SN   ++  R   H+N  G +E + +      ++     + E+ EQ EPG+YIT T
Sbjct: 994  IQLLSNVSSTISNRGAGHNN-QGHLE-ATIKNGSRNKEAEWRHEAEWVEQDEPGVYITLT 1051

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            +LP G K LKRVRFSR+RF+EK AE+WW EN+  VY+KY +
Sbjct: 1052 SLPGGIKDLKRVRFSRKRFSEKQAEQWWAENRARVYEKYNV 1092


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/1062 (41%), Positives = 626/1062 (58%), Gaps = 73/1062 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V+KII GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 53   DESVLIWFSGKEEKHLRLSHVSKIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+A IS     +  +  R   G+ S  +SP +Y RR          N
Sbjct: 111  CKDKDEAEVWFSGLKALISRSHHQKWRTESRSD-GIPSEANSPRTYTRRSSPLNSPFGSN 169

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
             G  +DA +  ++ S   SP  +  ++ FSD + Y+     F+ S+S+S  + +LS+  +
Sbjct: 170  DGSQKDA-DHHRLHSPYESPPKNGLDKAFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGS 228

Query: 172  PS-SPHMETE--NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGV 228
             S   HM+    +  +  L+ A +   +   H            +    L DV IWGEG+
Sbjct: 229  DSVHGHMKAMAVDAFRVSLSSAVSSLSQGSGH------------DDGGALGDVFIWGEGM 276

Query: 229  LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
              G +GG    + S    ++D+L PK LESAV+LDVQNI+ G +HAALVTK+GE+F WGE
Sbjct: 277  GDGVLGGGTHRAGSYFGVKMDSLFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGE 336

Query: 289  GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
               GRLGH V+ DV  PKL++ LS  N++ V+CGE+ TCA+T SG++YTWG   +   L+
Sbjct: 337  ESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 396

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G     SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDGTFGVLGHG+ ++
Sbjct: 397  GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 456

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHV 467
            +S PKEVESL+GL+    ACG WHTAA++++MV +   SN   GKLFTWGD DKGRLGH 
Sbjct: 457  ISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 516

Query: 468  DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            D E KL+PTCV  LV+ +F Q +CG  LTV  T  G VYTMGS V+GQLGNP A  +  T
Sbjct: 517  DKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPT 576

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
             VEGKL + FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +P+ VEAL+D
Sbjct: 577  RVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 636

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            +QV+S+ CG+S TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL +C +CS+K
Sbjct: 637  KQVKSIACGTSFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVYCHSCSSK 696

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQE-------NQSPRNLLNLQGSLS 700
            K + AS+ PN  K  RVCD CYN L+K   +    +         NQ PR  ++    L 
Sbjct: 697  KSLKASMAPNPNKAYRVCDNCYNKLRKAIETDASSQSSVSRRGSVNQGPREFIDEDEKLD 756

Query: 701  EEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRFK-T 758
               + +      S  +S    +SR+   K  E   S  S + +G  +WG ++    F   
Sbjct: 757  FRSRAQLARF--SSMESLKQAESRSKRNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPM 814

Query: 759  HCHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSESN 806
                K      +P +++ + +                  +LG    P    V  D   + 
Sbjct: 815  FGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSP--KIVVDDAKRNY 872

Query: 807  KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALA 866
            + LN+EV +LR Q  +L ++ Q+   +++    +++EA ++A EE  KCKAAKE+IK+L 
Sbjct: 873  ESLNQEVIKLRAQMESLTRKAQLQEVELERTTMQLKEAIAIAGEETAKCKAAKEVIKSLT 932

Query: 867  VRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL-----CSSPIV-- 919
             +L  ++E++        G+  ++   L T             +D L     C  P    
Sbjct: 933  AQLKDMAERLPV------GMGRSIKSPLFTSFGSSPTSNDVSTIDRLNGQITCEEPDTNG 986

Query: 920  FSNKL----KSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITF 975
              N+L     S+    +   N  G +E +        ++G    + E+ EQ EPG+YIT 
Sbjct: 987  LHNQLLLNGSSITSNRIAGHNKQGHLE-ATTKNGSRTKEGESRHEAEWVEQDEPGVYITL 1045

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            T+ P G K LKRVRFSR+RF+EK AE+WW EN+  VY++Y +
Sbjct: 1046 TSQPGGIKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNV 1087


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/1064 (42%), Positives = 633/1064 (59%), Gaps = 76/1064 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK+L+L +V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 54   DESILIWFSGKEEKRLKLTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 111

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+A IS     R +       G+ S  +SP +Y RR          N
Sbjct: 112  CKDKDEAEVWFSGLKALISRSHH-RKWRPESRSDGIPSEANSPRTYTRRSSPLNSPFGSN 170

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSD--SFYSSESSSSQIQNLSNIIT 171
              L +D+ +  ++ S   SP  +  ++ FSD + Y      F+  +S+S  + ++S   +
Sbjct: 171  ESLQKDSGDHLRLHSPYESPPKNGLDKAFSDVIYYPIPPMGFFRPDSASGSLHSVS---S 227

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
              S  M  +  MK  +     R   + +    +   G    +  D L DV IWGEG+  G
Sbjct: 228  GGSDSMHGQ--MK-TMPMDAFRVSLSSAVSSSSQGSGH---DDGDALGDVFIWGEGMGDG 281

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG V    S    ++D+LLPK LESAV+LDVQNI+ G KHAALVTK+GEVF WGE   
Sbjct: 282  VLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESG 341

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV  PKL+E LS  N++ V+CGE+ TCA+T SG++YTWG   +   L+G  
Sbjct: 342  GRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHG 401

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+++   L+G+ VS ++CG WHTA+V++SGQLFT+GDGTFG LGHG+ ++VS 
Sbjct: 402  NQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSL 461

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P+E+ESL+GL+    ACG WHTAA+V++MV +   SN   GKLFTWGD DKGRLGH D E
Sbjct: 462  PREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 521

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             KL+PTCV  LV+ +  Q +CG  +TV L+  G VYTMGS V+GQLGN +A  +    VE
Sbjct: 522  SKLVPTCVVTLVEPN-CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVE 580

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ I+ G+YHVAVLTS   V+TWGK ANG+LG GD+ +R TPT VEAL+D+QV
Sbjct: 581  GKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQV 640

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
            +S+ CG++ TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS KK +
Sbjct: 641  KSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNFKRKRHNCYNCGLVFCHSCSNKKSV 700

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEK-GA 709
             AS+ PN  KP RVCD C+N ++K T +    +      R  LN   SL    K++K  +
Sbjct: 701  KASMAPNPNKPYRVCDNCFNKIRKTTETDSSSQSSMSR-RGSLNQGWSLEFNGKDDKLDS 759

Query: 710  LTPSRGQSFTS----KQSRNVERKPGECLESASSLSS----GLQRWGQVSCPIRFKT-HC 760
             + ++   F+S    KQ  +   K  + LE  SS  S    G  +WG ++    F     
Sbjct: 760  RSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFG 819

Query: 761  HEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSESNKM 808
              K      +P +++ + +                  +LG    P    V  D    N  
Sbjct: 820  SSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSP--KMVVDDAKRINDN 877

Query: 809  LNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVR 868
            L++EV +LR Q  NL ++ Q+   +++   ++++EA ++A EE  KCKAAKE+IK+L  +
Sbjct: 878  LSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKAAKEVIKSLTAQ 937

Query: 869  LHTLSEKISAAKEAKEGVDANL--PPK-----LDTDKHPEVKLPKDR--------KVDSL 913
            L  ++E++        G   N+  PP      L+   +       DR        + DS 
Sbjct: 938  LKDMAERLPV------GASRNVRSPPSLASFGLNPGSNDLTNASFDRLNIQATSPESDST 991

Query: 914  CSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYI 973
             S+  + SN   ++  R      S+G ++ S+          TK ++ E+ EQ EPG+YI
Sbjct: 992  GSTNQILSNGSSTITNR------SAGHIKHSQSDAISRNGNKTKDNETEWVEQDEPGVYI 1045

Query: 974  TFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            T T+LP G   LKRVRFSR+RF+EK AE+WW EN+  VY++Y +
Sbjct: 1046 TLTSLPGGVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNV 1089


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/1057 (43%), Positives = 628/1057 (59%), Gaps = 63/1057 (5%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 53   DESVLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 110

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            CKDK +AE WF GL+  IS    R+ RT S      G+QS  +SP +Y RR   L     
Sbjct: 111  CKDKDEAEVWFNGLKTLISRSHHRKWRTES---RSDGMQSEANSPRTYTRRSSPLNSPFG 167

Query: 120  ATELSQ------VRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
            + +  Q      ++S  GSP  +  ++  SD + Y+     F+ S+S+S  + +LS+  +
Sbjct: 168  SNDSLQKDGDFRLQSPYGSPPKNGMDKALSDVILYTVPPKGFFPSDSASISVNSLSSGSS 227

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
                  E    MK  +     R   + +    +   G    +  D L DV IWGEG   G
Sbjct: 228  ------EMHGPMK-AMGIDAFRVSLSSAVSSSSQGSGH---DDGDALGDVFIWGEGTGDG 277

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG      S    ++D+LLPK LESAV+LDVQNI+ G +HAALVTK+GE+F WGE   
Sbjct: 278  VLGGGSHKVGSCFSLKMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESG 337

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV  PKLV+ L   N++ VSCGE+ TCA+T SG++YTWG   +   L+G  
Sbjct: 338  GRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG 397

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+K+   L+G+ VS +ACG WHTA+V+++GQLFT+GDGTFGVLGHG+  +V+ 
Sbjct: 398  NEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTM 457

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P+EVESL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DKGRLGH D E
Sbjct: 458  PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKE 517

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             KL+PTCV  LVD +F + SCG  +TV LT  G VYTMGS V+GQLGNP A  +    VE
Sbjct: 518  TKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVE 577

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEAL+D+QV
Sbjct: 578  GKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQV 637

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
            +S+ CG++ TAAICLHK +S  DQS CS C +PF F+RK+HNCYNCGL FC +CS+KK  
Sbjct: 638  KSIACGTNFTAAICLHKWVSGFDQSMCSGCHLPFNFKRKRHNCYNCGLVFCHSCSSKKCH 697

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGAL 710
             AS+ PN  KP RVCD CYN L+K   +    +      R++   QGS     KEEK   
Sbjct: 698  KASMAPNPNKPYRVCDNCYNKLRKALETDASSQSSVSRRRSI--NQGSTDFVEKEEKPES 755

Query: 711  TPSRGQ--SFTS----KQSRNVERKPGECLESASS----LSSGLQRWGQVSCPIRFKTHC 760
              SR Q   F+S    KQ  N   K  +  E  SS    + +G  +WG +S         
Sbjct: 756  VKSRAQLARFSSMESVKQGENQFSKKNKKFECNSSRVSPVPNGGSQWGAISKSFN-PVFG 814

Query: 761  HEKSVEPTPIPKTQMSTH--SPLLRKI----------SLGSNFIPIASTVEKDLSESNKM 808
              K      +P +++ +   SP+ R+           +LG    P  +    D   +N  
Sbjct: 815  SSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLTSPKIAV--DDAKRTNDS 872

Query: 809  LNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVR 868
            L++EV +L+ Q  NL ++ Q+   +++   ++++EA + A  EA KC AAKE+I +L  +
Sbjct: 873  LSQEVVKLKAQVENLTRKAQLQEVEMERTTKQLKEALAFAAAEATKCNAAKEVIMSLTAQ 932

Query: 869  LHTLSEK--ISAAKEAKEGVDANL--PPKLDTDKHPEVKLPKDR----KVDSLCSSPIVF 920
            L  ++E+  + AA+  K    A+L   P  +    P +     +    + D + S+  + 
Sbjct: 933  LKEMAERLPVGAARNIKSPSLASLGSSPPFNDVVTPSIDRSNGQTMSLEADVIESNSHLL 992

Query: 921  SNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPS 980
            SN   +   R   H+  + S  DS        ++       E+ EQ EPG+YITFT+L  
Sbjct: 993  SNGSSTASIRSSGHNRPANS--DSTTRNGNKVKESDSRHDAEWVEQDEPGVYITFTSLQG 1050

Query: 981  GQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            G K LKRVRFSR+RFTEK AE+WW EN+  VY +Y +
Sbjct: 1051 GAKDLKRVRFSRKRFTEKQAEQWWAENRARVYDQYNV 1087


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/1047 (42%), Positives = 627/1047 (59%), Gaps = 59/1047 (5%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EKQLRL+ V++II GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 98   DESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 155

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+  I+   RS       E R   + S  +SP +Y RR         
Sbjct: 156  CKDKDEAEVWFAGLKTLIT---RSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFS 212

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSS--DSFYSSESSSSQIQNLSNI 169
             N  + +D  E  ++RS  GSP     E+ FSD +SY++    F+ S+S++  + ++S  
Sbjct: 213  SNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVS-- 270

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
                S   +  N     +     R   + +    +   G    +  D L DV IWGEG  
Sbjct: 271  ----SGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGH---DDGDALGDVFIWGEGTG 323

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +GG      + +   +D L+PK LE AV LDVQNIS G +HA LVTK+GE++ WGE 
Sbjct: 324  EGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEE 383

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
              GRLGH V+ DV  PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG+    + L+G
Sbjct: 384  SGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLG 443

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS ++CG WHTAIV+++GQLFT+GDG+FGVLGHG+ Q++
Sbjct: 444  HGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL 503

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
            S P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRLGH D
Sbjct: 504  SVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGD 563

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             + +L+PTCV  LV+ +F Q +CG  +TV LT  G VYTMGS V+GQLGNP+A       
Sbjct: 564  KDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVR 623

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEAL+D+
Sbjct: 624  VEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDK 683

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV +VVCG + TAAIC+HK +S  DQS CS CR+PF  RRK+HNCYNC L FC ACS+KK
Sbjct: 684  QVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKK 743

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKG 708
             + ASL PN  KP RVCD+CY+ L K   + R    +  S   +     S+ EE++ +  
Sbjct: 744  SLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGS--VIQGFNDSVDEELETKSN 801

Query: 709  ALTP--SRGQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFKTHCHEKS 764
            A     S  +SF    SR  ++       S+  S + +G   W  ++    F +    K 
Sbjct: 802  AQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGS---SKK 858

Query: 765  VEPTPIPKTQMSTH--SPLLRKISLGSNFIP------IASTVEKDLSESNKMLNEEVQRL 816
                 +P +++ +   SP+ R+ S   +  P      + S    D  + N  +++EV  L
Sbjct: 859  FFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSL 918

Query: 817  RDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI 876
            R Q  NL ++ Q+    ++   ++++EA S+A EE  KCKAAKE+IK+L  +L  ++EK+
Sbjct: 919  RSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAEKL 978

Query: 877  SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDN 936
                   +  ++ LPP       P + +P D  V S        S +  S     L   N
Sbjct: 979  PEGAGLVK--NSRLPPL------PGISIPTDISVASESLGSPRSSGEPCSNGSNGLLVSN 1030

Query: 937  SSGSVEDSKVARTEPQQKGTKAS------KLEYAEQYEPGIYITFTTLPSGQKGLKRVRF 990
               SV + K++  E  + GT+        + E+ EQ EPG+YIT T LP G + LKRVRF
Sbjct: 1031 GPTSVRN-KLSHPEIPKNGTRLPDSDSKHESEWVEQDEPGVYITLTALPGGTRDLKRVRF 1089

Query: 991  SRRRFTEKAAERWWEENQVVVYQKYGI 1017
            SR+RF+E  AE+WW+EN+  VY++Y +
Sbjct: 1090 SRKRFSETQAEQWWQENRARVYEQYNV 1116


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/1060 (42%), Positives = 634/1060 (59%), Gaps = 66/1060 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK+L+L +V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 47   DESVLIWFSGKEEKRLKLTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 104

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKR--GVQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+A IS   R   +    E R  G+ S  +SP +Y RR         
Sbjct: 105  CKDKDEAEVWFSGLKALIS---RGHHWKWRPESRTDGIPSEANSPRTYTRRSSPLNSPFG 161

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSD--SFYSSESSSSQIQNLSNI 169
             N  L +D+ +  ++ S   SP  +  ++ FSD + Y      F+  +S+S  + ++S+ 
Sbjct: 162  SNESLQKDSGDHLRLHSPYESPPKNGLDKAFSDVVYYPIPPMGFFPPDSASGSVHSVSSG 221

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
             + S         M  ++        +      V+ +      +  D L DV IWGEG  
Sbjct: 222  GSDS---------MHGQMKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTG 272

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +GG      S    ++D+LLPK LESAV+LDVQNI+ G +HAA+VTK+GEVF WG  
Sbjct: 273  DGVLGGGAHHVGSNFGVKMDSLLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGE 332

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
              GRLGH V+ DV  PKL+E LS  N++ V+CGE+ TCA+T SG++YTWG   +   L+G
Sbjct: 333  SGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLG 392

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS ++CG WHTA+V++SGQLFT+GDGTFGVLGHG+ ++V
Sbjct: 393  HGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV 452

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
            S P+E+ESL+GL+    ACG WHTAA+V++MV +   SN   GKLFTWGD DKGRLGH D
Sbjct: 453  SLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 512

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             E KL+PT V  L + +F Q +CG  +TV L+ LG VYTMGS V+G LGN +A  +  T 
Sbjct: 513  KESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTP 572

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ I+ G+YHVAVLTS   V+TWGK ANG LG GD+ +R TPT VEAL+D+
Sbjct: 573  VEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDK 632

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV+S+ CG++ TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS KK
Sbjct: 633  QVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNFKRKRHNCYNCGLAFCHSCSNKK 692

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEK- 707
             + AS+ PN  KP RVCD C+N ++K T +     Q + S R  +N QGSL    K++K 
Sbjct: 693  SVKASMAPNPNKPYRVCDNCFNKIRKTTETDS-SSQASMSRRGSVN-QGSLEFNGKDDKL 750

Query: 708  GALTPSRGQSFTS----KQSRNVERKPGECLESASSLSS----GLQRWGQVSCPIRFK-T 758
             + + ++   F+S    KQ  +   K  + LE  SS  S    G  +WG ++    F   
Sbjct: 751  DSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPV 810

Query: 759  HCHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSESN 806
                K      +P +++ + +                  +LG    P    V  D    N
Sbjct: 811  FGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSP--KIVVDDAKRIN 868

Query: 807  KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALA 866
              L++EV +LR Q  NL ++ Q+   +++   ++++EA ++A EE  KCKAAKE+IK+L 
Sbjct: 869  DNLSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKAAKEVIKSLT 928

Query: 867  VRLHTLSEKISAAKEAKEGVDANLPPKLDT-DKHPEVKLPKDRKVDSL---CSSPIV--- 919
             +   ++E++          +A  PP L +   +P      +   D L    +SP     
Sbjct: 929  AQWKDMAERLPVGASR----NARSPPSLASFGLNPGSNDLTNASFDRLNIQATSPESDLN 984

Query: 920  -FSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTL 978
              +N+L S  G     + S+G ++ S+   T      TK ++ E+ EQ EPG+YIT T+L
Sbjct: 985  GSTNQLLS-NGSSTITNRSAGHIKHSQSDATSRNGSKTKDNETEWVEQDEPGVYITLTSL 1043

Query: 979  PSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIE 1018
            P G   LKRVRFSR+RF+EK AE+WW EN+  VY++Y + 
Sbjct: 1044 PGGVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVH 1083


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/1047 (42%), Positives = 627/1047 (59%), Gaps = 59/1047 (5%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EKQLRL+ V++II GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 52   DESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 109

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+  I+   RS       E R   + S  +SP +Y RR         
Sbjct: 110  CKDKDEAEVWFAGLKTLIT---RSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFS 166

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSS--DSFYSSESSSSQIQNLSNI 169
             N  + +D  E  ++RS  GSP     E+ FSD +SY++    F+ S+S++  + ++S  
Sbjct: 167  SNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVS-- 224

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
                S   +  N     +     R   + +    +   G    +  D L DV IWGEG  
Sbjct: 225  ----SGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGH---DDGDALGDVFIWGEGTG 277

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +GG      + +   +D L+PK LE AV LDVQNIS G +HA LVTK+GE++ WGE 
Sbjct: 278  EGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEE 337

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
              GRLGH V+ DV  PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG+    + L+G
Sbjct: 338  SGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLG 397

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS ++CG WHTAIV+++GQLFT+GDG+FGVLGHG+ Q++
Sbjct: 398  HGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL 457

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
            S P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRLGH D
Sbjct: 458  SVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGD 517

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             + +L+PTCV  LV+ +F Q +CG  +TV LT  G VYTMGS V+GQLGNP+A       
Sbjct: 518  KDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVR 577

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEAL+D+
Sbjct: 578  VEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDK 637

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV +VVCG + TAAIC+HK +S  DQS CS CR+PF  RRK+HNCYNC L FC ACS+KK
Sbjct: 638  QVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKK 697

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKG 708
             + ASL PN  KP RVCD+CY+ L K   + R    +  S   +     S+ EE++ +  
Sbjct: 698  SLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGSV--IQGFNDSVDEELETKSN 755

Query: 709  ALTP--SRGQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFKTHCHEKS 764
            A     S  +SF    SR  ++       S+  S + +G   W  ++    F +    K 
Sbjct: 756  AQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGS---SKK 812

Query: 765  VEPTPIPKTQMSTH--SPLLRKISLGSNFIP------IASTVEKDLSESNKMLNEEVQRL 816
                 +P +++ +   SP+ R+ S   +  P      + S    D  + N  +++EV  L
Sbjct: 813  FFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVKPNDSISQEVLSL 872

Query: 817  RDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI 876
            R Q  NL ++ Q+    ++   ++++EA S+A EE  KCKAAKE+IK+L  +L  ++EK+
Sbjct: 873  RSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAEKL 932

Query: 877  SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDN 936
                   +  ++ LPP       P + +P D  V S        S +  S     L   N
Sbjct: 933  PEGAGLVK--NSRLPPL------PGISIPTDISVASESLGSPRSSGEPCSNGSNGLLVSN 984

Query: 937  SSGSVEDSKVARTEPQQKGTKAS------KLEYAEQYEPGIYITFTTLPSGQKGLKRVRF 990
               SV + K++  E  + GT+        + E+ EQ EPG+YIT T LP G + LKRVRF
Sbjct: 985  GPTSVRN-KLSHPEIPKNGTRLPDSDSKHESEWVEQDEPGVYITLTALPGGTRDLKRVRF 1043

Query: 991  SRRRFTEKAAERWWEENQVVVYQKYGI 1017
            SR+RF+E  AE+WW+EN+  VY++Y +
Sbjct: 1044 SRKRFSETQAEQWWQENRARVYEQYNV 1070


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/1064 (41%), Positives = 639/1064 (60%), Gaps = 80/1064 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+W SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 48   DESALVWLSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--DDRSLDLI 105

Query: 62   CKDKVQAESWFLGLRAAIS--SCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            CKDK +AE W  GL+A IS    R+ R  S      G+ S  +SP ++ +R   L     
Sbjct: 106  CKDKDEAEVWITGLKALISRNHMRKGRGES---RSDGISSEATSPRAHTQRSSPLSSAFG 162

Query: 120  ATELSQ--------VRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLS-- 167
            + + SQ        +R+  GSP  +  E+  SD   Y+         ES+   + ++S  
Sbjct: 163  SGDSSQKDEIDPLRLRTPYGSPPKAGLEKVLSDMELYAVAPKVLCPPESACGSVHSVSSA 222

Query: 168  --NIITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWG 225
              + I      M  + F          R   + +    +   G    +  D L DV IWG
Sbjct: 223  GSDAINGRLKGMTVDAF----------RVSLSSAVSSSSQGSGH---DDSDALGDVYIWG 269

Query: 226  EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
            EG  GG +GG ++  V  +  + D+ +PK LESAV+LDVQ I+ G +HAALVTK+GEVF 
Sbjct: 270  EGTAGGILGGGMN-GVGGSGVRTDSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFS 328

Query: 286  WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
            WGE   GRLGH V+ DV  PKLV+ L   NV+ V+CGE+ +CA+T SG++YTWG ++H  
Sbjct: 329  WGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNC 388

Query: 346  DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
             L+G R   S+W+P+KL   L+G+ V+ V+CG WHTA+V++SGQLFT+GDGTFGVLGHG+
Sbjct: 389  GLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD 448

Query: 406  LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRL 464
             ++VS P+EVESL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DKGRL
Sbjct: 449  RRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRL 508

Query: 465  GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            GH D E +L+PTCV  LV+ +F Q +CG  +TV LT  G VYTMGS V+GQLGNP+A  +
Sbjct: 509  GHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGK 568

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
                VEGKL + FV+ +  G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEA
Sbjct: 569  LPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEA 628

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSAC 644
            L+D+QV+SVVCG+S TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +C
Sbjct: 629  LKDKQVKSVVCGTSFTAAICLHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSC 688

Query: 645  STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVK 704
            S KK + AS+ PN  KP RVCD C+  L++ T       + + S  + L+ +GS+++ + 
Sbjct: 689  SNKKSLKASMAPNPNKPYRVCDQCFGKLRRAT-------EIDSSYHSALSRRGSINQRLI 741

Query: 705  EEKGALTPSR------GQSFTSKQSRNVE----RKPGECLESASSLSSGLQRWGQVSCPI 754
            E + +  P+       G++ + + S++VE    ++  +   + S +S       Q +   
Sbjct: 742  EAENSEYPNTRSRIQLGRNNSIEMSKDVESESLKRNKKLSLNGSQVSLSANDSSQRNAFN 801

Query: 755  RFKTHCHEKSVEPTPIPKTQMSTH--SPLLRKIS--LGSNFIPIAST------VEKDLSE 804
              K+    K      +P +++ +   SP  R+ S    +   PI S       V  D  +
Sbjct: 802  TSKSFGSSKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTPILSVRALPRIVVDDTKK 861

Query: 805  SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKA 864
             N  L+EEV +LR Q   L ++ Q+ + +++   ++++EA ++A EE  KCKAAKE+IK+
Sbjct: 862  LNDGLSEEVVKLRSQVEELTRKAQLQDVELERTTKQLKEAIAVADEETAKCKAAKEVIKS 921

Query: 865  LAVRLHTLSEKI------SAAKEAKEGVDANLPPKLDTDKHPEVKLPKD-RKVDSLCSSP 917
            L  +L  L+E++      +++  +     A  P ++ +  +  +  P    + DS  SS 
Sbjct: 922  LTAQLKELAERLPVVPTRNSSSPSFYFSSATPPREVSSAVNEHLSSPTTYHEPDSNGSSN 981

Query: 918  IVFSNKLKSVYGRELCHDNS----SGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYI 973
            +V SN   +   + L H  +    + +   ++ A+ EP      A   E+ EQ EPG+YI
Sbjct: 982  LVISNVSSTASYQTLNHPEAAHLEATTRSRNRTAKVEP------AHGDEWVEQDEPGVYI 1035

Query: 974  TFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            T  +LP G K LKRVRFSR+RF+EK AE+WW  N+  VYQ+Y +
Sbjct: 1036 TLVSLPGGAKDLKRVRFSRKRFSEKQAEQWWAANRARVYQQYNV 1079


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/1061 (41%), Positives = 632/1061 (59%), Gaps = 68/1061 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 52   DESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 109

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+A IS    R+ RT S      G+ S  +SP +Y RR         
Sbjct: 110  CKDKDEAEVWFSGLKALISRSHHRKWRTES---RSDGIPSEANSPRTYTRRSSPLNSPFG 166

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNI 169
             N  L +D  +  ++ S   SP  +  ++   D + Y+     F+  +S+S+ + ++S+ 
Sbjct: 167  SNESLQKDCGDHLRLHSPYESPPKNGLDKAL-DVVLYAVPQKGFFPPDSASASVHSVSSG 225

Query: 170  ITPS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGV 228
             + S   HM+T     + ++ +      ++         GS   +  D L DV IWGEG 
Sbjct: 226  GSDSMHGHMKTMGMDAFRVSLSSAVSTSSQ---------GSGH-DDGDALGDVFIWGEGT 275

Query: 229  LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
              G +GG      S    ++D+L PK LESAV+LDVQNI+ G +HAALVTK+GEVF WGE
Sbjct: 276  GDGVLGGGNHRVGSCLGAKMDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 335

Query: 289  GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
               GRLGH V+ DV  PKL+E LS  N++ V+CGE+ +CA+T SG++YTWG+  +   L+
Sbjct: 336  ESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLL 395

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G     SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDGTFG LGHG+ ++
Sbjct: 396  GHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS 455

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG-KLFTWGDADKGRLGHV 467
            VS P+EVESL+GL+    ACG WHTAA+V++MV    S+      LFTWGD DKGRLGHV
Sbjct: 456  VSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHV 515

Query: 468  DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            D E KL+PTCV  L + +  Q +CG  LTV LT  G+VYTMGS V+GQLGNP+A  +   
Sbjct: 516  DKEAKLVPTCVA-LAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPI 574

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            +VEGKL E FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R TPT VEAL+D
Sbjct: 575  LVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKD 634

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            + V+S+ CG++ TAAICLHK +S  DQS CS CRMPF F+RK+HNCYNCGL FC +CS+K
Sbjct: 635  KDVKSIACGTTFTAAICLHKWVSGVDQSMCSGCRMPFNFKRKRHNCYNCGLVFCHSCSSK 694

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKI------THSGRLLKQE-NQSPRNLLNLQGSLS 700
            K + AS+ PN  KP RVCD C N L+K       +HS    +   NQ P  L++    L 
Sbjct: 695  KSLKASMAPNPNKPYRVCDNCLNKLRKTVETDASSHSSVSRRGSVNQGPLELIDKDDKLD 754

Query: 701  EEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFK- 757
               + +      S  +SF   +SR+ ++       S+  S + +G  +WG ++    F  
Sbjct: 755  SRSRNQLARF--SSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNP 812

Query: 758  THCHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSES 805
                 K      +P +++ + +                  +LG    P    V  D   +
Sbjct: 813  VFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLASP--KIVVDDAKRT 870

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
            N  L++EV +LR Q  NL ++ Q+   +++   +++++A ++A EE  KCKAAKE+IK+L
Sbjct: 871  NDSLSQEVIKLRSQVENLTRKAQLQEVELERTAKQLKDAIAIAGEETAKCKAAKEVIKSL 930

Query: 866  AVRLHTLSEK--ISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSP---IVF 920
              +L  ++E+  + AA+  K    A+    +      +V      +++   +SP   +  
Sbjct: 931  TAQLKDMAERLPVGAARTVKSPTLASSFGSIPCSN--DVSYASTDRLNIQATSPEADLTG 988

Query: 921  SNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKAS----KLEYAEQYEPGIYITFT 976
            SN      G       S+G  + S+   T      TK S    + E+ EQ EPG+YIT T
Sbjct: 989  SNYQLHSNGSSTVSSRSAGHTKQSQPDSTNRNGSRTKDSESRNETEWVEQDEPGVYITLT 1048

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            +LP G   LKRVRFSR+RF+EK AE+WW EN+  VY++Y +
Sbjct: 1049 SLPGGIIDLKRVRFSRKRFSEKQAEQWWAENRGRVYEQYNV 1089


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/1063 (41%), Positives = 635/1063 (59%), Gaps = 73/1063 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   ERSLDLI
Sbjct: 50   DESILIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKECQSFSLIY--NERSLDLI 107

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK + E WF GL+A IS    +R +       G+ S V+SP ++ +R          N
Sbjct: 108  CKDKDETEVWFSGLKALISRIH-NRKWRTESRSDGMLSEVNSPRTFTQRSSPLHSPFSSN 166

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              + ++  E  ++ S  GSP     ++  SD + Y+     F+ S+S+S  + +LS+  +
Sbjct: 167  DSVQKEGGEPIRLHSPYGSPPKYGLDKALSDVMLYNIPPKGFFHSDSASGSVHSLSSGGS 226

Query: 172  PS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             S   HM+T     +       R   + +    +   G+   +  D L DV IWGEG   
Sbjct: 227  DSMHGHMKTVPMDAF-------RVSLSSAVSSSSQGSGN---DDCDALGDVFIWGEGTGE 276

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG      S   +++D+LLPK LES V+LDVQNI+ G +HAALVTK+GEVF WGE  
Sbjct: 277  GVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEY 336

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
             GRLGH  + D   PKL++ LS +N++ V+CGE+ TCA+T SG++YTWG   + + L+G 
Sbjct: 337  GGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH 396

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             +  SHW+P+++   L G+ +S ++CG WHTA+V+++G+LFT+GDGTFGVLGHG+  ++S
Sbjct: 397  GKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSIS 456

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P+EVESL+GL+    ACG WHTAA+V++++ +   +N   GKLFTWGD DKGRLGH D 
Sbjct: 457  IPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK 516

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E +L+PTCV  LV+ +F Q +CG  LTV LT  G +YTMGS V+GQLGNP+A  +    V
Sbjct: 517  EARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARV 576

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EGKL + FV+ ++ G+YHVAVLTS   VYTWGK ANG+LG G + +R TPT VEAL+D+Q
Sbjct: 577  EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQ 636

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CG++ TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+KK 
Sbjct: 637  VKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKS 696

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + AS+ PN  K  RVCD CY+ L+K         Q + S R  +N QGS     K +K  
Sbjct: 697  LKASMAPNPNKVYRVCDNCYHKLKKFIEMD-TSSQSSLSRRGSIN-QGSTEPVNKNDKLD 754

Query: 710  LTP----SRGQSFTS-KQSRNVERKPGECLESASS----LSSGLQRWGQVSCPIRFK-TH 759
            L P    +R  S  S KQ  +   K  + LE +SS    + SG  + G ++    F    
Sbjct: 755  LKPRSQLARLPSVESFKQVESQFSKKNKKLEFSSSRVSPIPSGGSQRGSLNISKSFNPVF 814

Query: 760  CHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSESNK 807
               K      +P +++ + +                  +LG    P  +    D   +N 
Sbjct: 815  GSSKKFFAASLPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPRIAV--NDAKSTNN 872

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
             L++EV RLR Q  NL ++ Q+   +++   ++++EA S+A EEA +C AAKE+IK+L  
Sbjct: 873  RLSQEVIRLRAQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTA 932

Query: 868  RLHTLSEK--ISAAKEAKEGVD--ANLPP-------KLDTDKHPEVKLPKDRKVDS--LC 914
            +L  ++E+  + AA+  K  +   ++ PP        +D     E  L  D    S  L 
Sbjct: 933  QLKEMAERLPVGAARNIKSTLASFSSGPPFNHLINTFIDQLSGQETSLETDSNSSSVQLL 992

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYIT 974
            S+    +N   S   +    D++      +++  TE +Q+       E+ EQ EPG+YIT
Sbjct: 993  SNGSSTANNQSSTQSKSSQLDSAKNG---NRIKETESRQEA------EWVEQDEPGVYIT 1043

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             T+ P G K LKRVRFSR+RFTEK AE WW EN+  VY++Y +
Sbjct: 1044 LTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNV 1086


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/1063 (42%), Positives = 629/1063 (59%), Gaps = 75/1063 (7%)

Query: 1    MDEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
             DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDL
Sbjct: 74   FDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDL 131

Query: 61   ICKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLE 118
            ICKDK +AE WF GL+A IS    R+ RT S      G+ S  +SP +Y RR   L    
Sbjct: 132  ICKDKDEAEVWFSGLKALISRSHHRKWRTES---RSDGIPSEANSPRTYTRRSSPLHSPF 188

Query: 119  DATELSQVRSLCGSPSLSLSERCFSDGLSYSSD---------SFYSSESSSSQIQNLSNI 169
             + E SQ  S       S  E    +GL  + D         SF+  +S+S+ + ++S+ 
Sbjct: 189  GSNESSQKDSGDHLRLHSPYESPPKNGLDKALDVVLYAVPQKSFFPLDSASASVHSISSG 248

Query: 170  ITPS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGV 228
             + S   HM+T     +       R   + +    +   G    +  D L DV IWGEG 
Sbjct: 249  GSDSMHGHMKTMGMDAF-------RVSLSSAVSSSSQGSGH---DDGDALGDVFIWGEGT 298

Query: 229  LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
              G +GG      S    ++D+L PK LESAV+LDVQNI+ G +HAALVTK+GE+F WGE
Sbjct: 299  GDGVVGGGNHRVGSGLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGE 358

Query: 289  GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
               GRLGH V+ DV  PKL++ LS  N++ V+CGE+ TCA+T SG++YTWG+  +   L+
Sbjct: 359  ESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLL 418

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G     SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDGTFG LGHG+ ++
Sbjct: 419  GHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS 478

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHV 467
            VS P+EVESL+GL+    +CG WHTAA+V++MV +   SN   GKLFTWGD DKGRLGH 
Sbjct: 479  VSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 538

Query: 468  DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            D E KL+PTCV  LV+ +F Q +CG  LTV LT  G VY MGS V+GQLGNP+A  +  T
Sbjct: 539  DKEAKLVPTCVA-LVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPT 597

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
             VEGKL + FV+ I+ G+YHVAVLT    VYTWGK ANG+LG GD+ +R  PT V+AL+D
Sbjct: 598  RVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKD 657

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            + V+S+ CG++ TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+K
Sbjct: 658  KHVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSK 717

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEK 707
            K + AS+ PN  KP RVCD C+N L+K   +            ++   QGSL E + ++ 
Sbjct: 718  KSLKASMAPNPNKPYRVCDGCFNKLRKTLETDSSSHSSVSRRGSI--NQGSL-ELIDKDD 774

Query: 708  GALTPSRGQ--SFTS----KQSRNVERKPGECLESASSLSS-----GLQRWGQVSCPIRF 756
               T SR Q   F+S    KQ  +   K  + LE  SS  S     G QR G ++    F
Sbjct: 775  KLDTRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQR-GALNISKSF 833

Query: 757  K-THCHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLS 803
                   K      +P +++ + +                  +LG    P    V  D  
Sbjct: 834  NPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTTP--KIVVDDAK 891

Query: 804  ESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIK 863
            ++N  L++EV +LR Q  +L ++ Q+   +++   +++++A ++A EE  KCKAAKE+IK
Sbjct: 892  KTNDSLSQEVIKLRSQVESLTRKAQLQEIELERTSKQLKDAIAIAGEETAKCKAAKEVIK 951

Query: 864  ALAVRLHTLSEK--ISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSP---I 918
            +L  +L  ++E+  +  AK  K        P + +    E+      +++   +SP   +
Sbjct: 952  SLTAQLKDMAERLPVGTAKSVKS-------PSIASFGSNELSFAAIDRLNIQATSPEADL 1004

Query: 919  VFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKA----SKLEYAEQYEPGIYIT 974
              SN      G     + S+G  + S+   T      TK     S+ E+ EQ EPG+YIT
Sbjct: 1005 TGSNTQLLSNGSSTVSNRSTGQNKQSQSDSTNRNGSRTKDSESRSETEWVEQDEPGVYIT 1064

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             T+LP G   LKRVRFSR+RF+EK AE WW EN+V VY++Y +
Sbjct: 1065 LTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQYNV 1107


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
            distachyon]
          Length = 1023

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1054 (41%), Positives = 595/1054 (56%), Gaps = 109/1054 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEK L+WYS  +EK L LNSV+ +I+GQ+T                             I
Sbjct: 46   DEKTLVWYSKDREKHLSLNSVSTVILGQKT-----------------------------I 76

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQ--SCVSSPASYIRRKHNLGLLED 119
            C+D+ QAE W LGL A IS+      FS +  K G Q  SC ++P SYI+RK  L  + D
Sbjct: 77   CRDRDQAECWHLGLTALISA---HSPFSSVGSKSGRQITSCTNTPRSYIQRKSKLSAVHD 133

Query: 120  ATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQI----QNLSNIITPSSP 175
                 QV    GSP ++  +  F   L  S   FY  + + S +    + L+  +T  + 
Sbjct: 134  TPRHKQVYPSYGSPKMTPKD-FFGSYLDCSEALFYQRQQTFSDVDSYLEKLNPKVTNPAR 192

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE-RKDILKDVMIWGEGVLGGDIG 234
            H   +  +  +     T+ P          T+  P    R D L DV +WG+ VLG  + 
Sbjct: 193  HGLKDILVGNKHKTQITQKPN-------LKTFEVPRAACRLDSLNDVFLWGD-VLGSML- 243

Query: 235  GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
                     +   +   LP+L+ S  MLDVQ+I+ G  HAA+VTK GEVF WG      L
Sbjct: 244  ---------DSEDIPKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTL 294

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GH++N  VSCPKLVE L+ ++V++V+ G   TCA+T SGE+  W    H   L+     R
Sbjct: 295  GHQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYER 354

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            + W P KLF  +D + VSK+ACGEWHTAI+++SGQLFTYGDGTFGVLGHG+ Q +++PKE
Sbjct: 355  NQWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKE 414

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            VESL+GL+VKSVACGPWHTAA+V++       NA  GKLFTWGDAD+G+LGH D + KL+
Sbjct: 415  VESLKGLRVKSVACGPWHTAAVVEV-TSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV 473

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV  L  +DF+Q SCG  LTV LT  G V+T+GS+ HGQLGNP A   SI  VEG LK
Sbjct: 474  PTCVDLLTSYDFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLK 533

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ ISSGS HVAVLT  G V+TWGK A+GQLGLGD   R +PT VEAL+ R V+S+ 
Sbjct: 534  NEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQSIA 593

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CGS+ +AA+CLHK +SV DQS CS C+M FGF RKKH+CYNCG  FC++CS+ KI  A  
Sbjct: 594  CGSNFSAAVCLHKGMSVKDQSICSGCQMAFGFTRKKHSCYNCGSMFCNSCSSNKIAKA-- 651

Query: 655  TPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
              +K +  RVCD C+  LQK+  S +   Q   S  ++           + E  A TP  
Sbjct: 652  --DKNRRYRVCDVCFCQLQKVVDSSKFKPQPKISKGDMF----------RAEIKAYTPKL 699

Query: 715  GQSFTS-----KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTP 769
             + F       ++   V+    + ++SA  +    +RWGQV CP +F +    ++ +  P
Sbjct: 700  SRLFKEANLIVEKMAAVQGPNQKNVDSAIPIQEKTRRWGQVECPGQFVSA--RENFKHQP 757

Query: 770  IPKTQMSTHSPLLRK-----ISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLE 824
            I   QM + S   R      + +G++      + +++L+ +  ML EEV++LR Q   L 
Sbjct: 758  ISNNQMHSVSFSQRMHDSVGLKVGNSLRRSTDSQKEELTMTETMLKEEVKQLRSQVTALG 817

Query: 825  KQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKE 884
            +QCQ  N   Q  +Q+++E W L R+EA KCKAAK+IIK L  + + LSEK+S  +++  
Sbjct: 818  EQCQQKNLIAQLYKQRLDETWLLVRDEAAKCKAAKDIIKVLTNQCNALSEKLSVGQQSG- 876

Query: 885  GVDANLPPKLDTDKHP--EVKLPKD---------RKVDSLCSSPIVFSNKLKS-VYGREL 932
              ++ + P     + P  +V +P D         R  DS        SN   + + G + 
Sbjct: 877  --NSKITPNSVPRRAPSTDVVVPADGSFSHHNIARTFDS--DGYTTESNSTAAPIDGHQN 932

Query: 933  CHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSR 992
                S GS   ++   T     G         EQ E G+Y T    PSGQK ++R+RFSR
Sbjct: 933  IARKSDGSGYTTEADSTSAPIDGV-------IEQIERGVYATLAVSPSGQKDIRRMRFSR 985

Query: 993  RRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQN 1026
            + F+EK A+RWWEEN   VY+KY  ++ +  + N
Sbjct: 986  KHFSEKQAQRWWEENMSKVYEKYSTKKAATPSLN 1019


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
            distachyon]
          Length = 1090

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/1062 (41%), Positives = 620/1062 (58%), Gaps = 86/1062 (8%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EKQLRLN V++II GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 53   DESILIWFSGKEEKQLRLNHVSRIIPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+  IS   RS       E R   + S  +SP +Y RR         
Sbjct: 111  CKDKDEAEVWFAGLKTLIS---RSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFS 167

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDS--FYSSESSSSQIQNLSNI 169
             N  + +D  E  ++RS  GSP     E+ FSD +SY++    F+ S+S+   + ++S+ 
Sbjct: 168  SNDSVHKDGAENYRLRSPYGSPPKVGLEKAFSDIVSYTAPPRPFFPSDSNVGSVHSVSSG 227

Query: 170  ITPS----SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWG 225
             + +    S  +  +NF             +      V+ +      +  D L DV +WG
Sbjct: 228  HSDNTNGHSRGLPMDNF-------------RVSLSSAVSSSSHGSGHDDGDALGDVFMWG 274

Query: 226  EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
            EG   G +GG      + +  ++D LLPK LE A  LDVQNIS G +HA LVTK+GEV+ 
Sbjct: 275  EGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYS 334

Query: 286  WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
            WGE   GRLGH V+ DV  PKLVE L+ +N++ V+CGE+ TCA+T SG++YTWG+     
Sbjct: 335  WGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394

Query: 346  DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
             L+G     SHW+P++L   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+
Sbjct: 395  GLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGD 454

Query: 406  LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRL 464
             Q++S P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRL
Sbjct: 455  RQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRL 514

Query: 465  GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            GH D + +L+PTCV  LV+ +F Q +CG   TV LT  G VYTMGS+V+GQLGNP+A   
Sbjct: 515  GHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM 574

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
                VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEA
Sbjct: 575  VPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA 634

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSAC 644
            L+D+QV SVVCG + TAAIC+HK +S  DQS CS CR+PF  RRK+HNCYNC L FC +C
Sbjct: 635  LKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHSC 694

Query: 645  STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVK 704
            S+KK + ASL PN  KP RVCD CY  L K   + R    +  +   L      ++EE+ 
Sbjct: 695  SSKKSLKASLAPNPNKPYRVCDNCYCKLNKGPETDRYSSAKRGAV--LQGFNDPINEEL- 751

Query: 705  EEKGALTPSR---GQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFKTH 759
            E +  +  SR    +SF +  SR  ++       S+  S + +G   W  ++    F + 
Sbjct: 752  ETRSNVQLSRLSSMESFKNMDSRYSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGS- 810

Query: 760  CHEKSVEPTPIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESNK 807
               K      +P +++ +   SP+              +LG    P    V         
Sbjct: 811  --SKKFFSASVPGSRIVSRATSPVSRRSSPPRSTTPTPTLGGLTSP--RVVVDGAKPMKD 866

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
             LN+EV  LR Q  NL ++  +   +++   ++++EA S+A EE  KCKAAKE+IK+L  
Sbjct: 867  GLNQEVINLRSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTA 926

Query: 868  RLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSV 927
            +L  ++EK+     A       LPP         + LP D          + + N     
Sbjct: 927  QLKCMAEKLPEGAVAVPVKHNRLPPLSG------IPLPSDIS--------MAYENLGSPR 972

Query: 928  YGRELCHDNSSGSVEDSKVART------EPQQKGTKA----SKL--EYAEQYEPGIYITF 975
               E   + S+GS+  +  +        E  + GT+     SKL  E+ EQ EPG+YIT 
Sbjct: 973  SSGEPYSNGSNGSIVSNGPSSVRNKTHLEVGKNGTRQPDSDSKLESEWVEQDEPGVYITL 1032

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            T LP G + LKRVRFSR+RF+E  AE+WW+EN+  VY+ Y +
Sbjct: 1033 TALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYELYNV 1074


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101226798
            [Cucumis sativus]
          Length = 1103

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/1063 (41%), Positives = 632/1063 (59%), Gaps = 73/1063 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   ERSLDLI
Sbjct: 50   DESILIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKECQSFSLIY--NERSLDLI 107

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNL------- 114
            CKDK + E WF GL+A IS    +R +       G+ S V+SP ++ +R   L       
Sbjct: 108  CKDKDETEVWFSGLKALISRIH-NRKWRTESRSDGMLSEVNSPRTFTQRSSPLHSPFSSN 166

Query: 115  -GLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              + ++  E  ++ S  GSP     ++  SD + Y+     F+ S+S+S  + +LS+  +
Sbjct: 167  DSVQKEGGEPIRLHSPYGSPPKYGLDKALSDVMLYNIPPKGFFHSDSASGSVHSLSSGGS 226

Query: 172  PS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             S   HM+T     +       R   + +    +   G+   +  D L D    GEG   
Sbjct: 227  DSMHGHMKTVPMDAF-------RVSLSSAVSSSSQGSGN---DDCDALGDXFYLGEGTGE 276

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG      S   +++D+LLPK LES V+LDVQNI+ G +HAALVTK+GEVF WGE  
Sbjct: 277  GVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEY 336

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
             GRLGH  + D   PKL++ LS +N++ V+CGE+ TCA+T SG++YTWG   + + L+G 
Sbjct: 337  GGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH 396

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             +  SHW+P+++   L G+ +S ++CG WHTA+V+++G+LFT+GDGTFGVLGHG+  ++S
Sbjct: 397  GKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSIS 456

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P+EVESL+GL+    ACG WHTAA+V++++ +   +N   GKLFTWGD DKGRLGH D 
Sbjct: 457  IPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK 516

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E +L+PTCV  LV+ +F Q +CG  LTV LT  G +YTMGS V+GQLGNP+A  +    V
Sbjct: 517  EARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARV 576

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EGKL + FV+ ++ G+YHVAVLTS   VYTWGK ANG+LG G + +R TPT VEAL+D+Q
Sbjct: 577  EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQ 636

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CG++ TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+KK 
Sbjct: 637  VKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKS 696

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + AS+ PN  K  RVCD CY+ L K         Q + S R  +N QGS+    K +K  
Sbjct: 697  LKASMAPNPNKVYRVCDNCYHKLXKFIEMD-TSSQSSLSRRGSIN-QGSMEPVNKNDKLD 754

Query: 710  LTP----SRGQSFTS-KQSRNVERKPGECLESASS----LSSGLQRWGQVSCPIRFK-TH 759
            L P    +R  S  S KQ  +   K  + LE +SS    + SG  + G ++    F    
Sbjct: 755  LKPRSQLARLPSVESFKQVESQFSKKNKKLEFSSSRVSPIPSGGSQRGSLNISKSFNPVF 814

Query: 760  CHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNFIPIASTVEKDLSESNK 807
               K      +P +++ + +                  +LG    P  +    D   +N 
Sbjct: 815  GSSKKFFAASLPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPRIAV--NDAKSTNN 872

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
             L++EV RLR Q  NL ++ Q+   +++   ++++EA S+A EEA +C AAKE+IK+L  
Sbjct: 873  RLSQEVIRLRAQVENLTRKAQLQEVELERTSKQLKEAISIASEEAARCNAAKEVIKSLTA 932

Query: 868  RLHTLSEK--ISAAKEAKEGVD--ANLPP-------KLDTDKHPEVKLPKDRKVDS--LC 914
            +L  ++E+  + AA+  K  +   ++ PP        +D     E  L  D    S  L 
Sbjct: 933  QLKEMAERLPVGAARNIKSTLASFSSGPPFNNLINTFIDQLSGQETSLETDSNSSSVQLL 992

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYIT 974
            S+    +N   S   +    D++      +++  TE +Q+       E+ EQ EPG+YIT
Sbjct: 993  SNGSSTANNQSSTQSKSSQLDSAKNG---NRIKETESRQEA------EWVEQDEPGVYIT 1043

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             T+ P G K LKRVRFSR+RFTEK AE WW EN+  VY++Y +
Sbjct: 1044 LTSQPGGAKDLKRVRFSRKRFTEKQAEHWWAENRARVYERYNV 1086


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/1052 (40%), Positives = 600/1052 (57%), Gaps = 98/1052 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEK L+WYS  +EK L LNSV+ +++GQ+T                             I
Sbjct: 46   DEKTLVWYSKDREKHLSLNSVSTVVLGQKT-----------------------------I 76

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            C+D+ QAE WFLGL A  SS       +  +  R + SC  SP SY++RK  L    D  
Sbjct: 77   CRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDTP 136

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITP--SSPHMET 179
              +QV    GSP   + ++ F   L  S   FY    +S  I +    + P  ++P    
Sbjct: 137  RHTQVYPSYGSP--KIQKKIFGGNLDSSEALFYPRHPTSCDIDSYIEKLNPKIATP---V 191

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE-RKDILKDVMIWGEGVLGGDIGGAVD 238
            ++ +K ++  A+ R  +N +H     T+  P +  R D LKDV +WG  VLG  +G    
Sbjct: 192  KHGLK-DIMVANRRA-QNITHTPKLKTFEGPRVACRLDSLKDVFLWGS-VLGSMLGSE-- 246

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
                     +   LP+L+ SA MLDVQ+I+ G  HAA++TK+GEV+ WG    GRL  KV
Sbjct: 247  --------DIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKV 298

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            N++ SCPK+VE L+ ++V++V+ G   TCA+T SGE++ WG   H   L+ +   R+ W 
Sbjct: 299  NVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWF 358

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P K    +D + VSK+ACGEWHTAI+++SGQLFTYGDGTFGVLGHG+ Q V++PKEVESL
Sbjct: 359  PHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL 418

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +G +VKSVACGPWHTAAIV++M    K NA  GKLFTWGDAD+G+LGH D + KLLPTCV
Sbjct: 419  KGSRVKSVACGPWHTAAIVEVM-SSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCV 477

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              L  +D +Q SCG  +TV LT  G V+T+GS+ HGQLGNPKA   SI  VEG LK EFV
Sbjct: 478  DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFV 537

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + ISSGS HVAVLT  G V+TWGK A GQLGLGD   R +PT VEAL  R VESVVCG +
Sbjct: 538  REISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFN 597

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TAAICLHK++S+ DQS CS C+M FGF RK+HNCYNCG  FCS+C++ KI  A+L P+ 
Sbjct: 598  FTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDT 657

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS----- 713
             +  RVCD C+  LQK+  S           ++   L+ S  E  K E  A TP      
Sbjct: 658  NRRYRVCDACFYQLQKVVDSS----------KDKSRLKISKGEMFKLELKAYTPKLSRLF 707

Query: 714  RGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKT 773
            +  +F +++  +V+       E A+++ +  +RWGQV CP  F +   + S +  P+  +
Sbjct: 708  KEANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECPALFIS--AQDSFQTQPVSNS 765

Query: 774  Q-------MSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
            +          H   + K  +   F   A   E ++ ++   L  +V++L  Q   L +Q
Sbjct: 766  EGCAISFSQRMHDSAVLKSGVSLRFTD-AQREEIEMMQTE--LQGQVKQLHSQVAVLTEQ 822

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEG- 885
            CQ  +  VQ  +QK+++ W + R+EA +CKAAK+IIK L  + + LSEK+S  + ++   
Sbjct: 823  CQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQCNALSEKLSIGQLSENSK 882

Query: 886  VDANLPPKLDTDKHPEVKLPKD---RKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSV- 941
            +  N  P   T    +    ++   RK+  L ++     N   S+   + C   S+  V 
Sbjct: 883  ITPNSIPMQPTKIELQGNTGRNLVTRKLGQLNNT----QNHGSSIQTEKECVPLSNAVVP 938

Query: 942  EDSKVARTEPQQKGTKASKLEYA-----------EQYEPGIYITFTTLPSGQKGLKRVRF 990
            ED   ++    +K +       A           EQ E G+Y+TF+T   G+K +KR+RF
Sbjct: 939  EDVPFSQQNGARKFSSDGYTTEAPLAAPPTDSVTEQIEHGVYVTFSTSSCGKKDIKRIRF 998

Query: 991  SRRRFTEKAAERWWEENQVVVYQKYGIEEYSN 1022
            SR+ F EK A+ WWE N+  VY  Y +E+ + 
Sbjct: 999  SRKHFGEKEAQHWWEHNKTRVYDNYKVEQMAT 1030


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/1052 (40%), Positives = 600/1052 (57%), Gaps = 97/1052 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEK L+WYS  +EK L LNSV+ +++GQ+T                             I
Sbjct: 46   DEKTLVWYSKDREKHLSLNSVSTVVLGQKT-----------------------------I 76

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            C+D+ QAE WFLGL A  SS       +  +  R + SC  SP SY++RK  L    D  
Sbjct: 77   CRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDTP 136

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITP--SSPHMET 179
              +QV    GSP + + ++ F   L  S   FY    +   I +    + P  ++P    
Sbjct: 137  RHTQVYPSYGSPKI-IQKKIFGGNLDSSEALFYPRHPTFCDIDSYIEKLNPKIATP---V 192

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE-RKDILKDVMIWGEGVLGGDIGGAVD 238
            ++ +K ++  A+ R  +N +H     T+  P +  R D LKDV +WG  VLG  +G    
Sbjct: 193  KHGLK-DIMVANRRA-QNITHTPKLKTFEGPRVACRLDSLKDVFLWGS-VLGSMLGSE-- 247

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
                     +   LP+L+ SA MLDVQ+I+ G  HAA++TK+GEV+ WG    GRL  KV
Sbjct: 248  --------DIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKV 299

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            N++ SCPK+VE L+ ++V++V+ G   TCA+T SGE++ WG   H   L+ +   R+ W 
Sbjct: 300  NVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWF 359

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P K    +D + VSK+ACGEWHTAI+++SGQLFTYGDGTFGVLGHG+ Q V++PKEVESL
Sbjct: 360  PHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL 419

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +G +VKSVACGPWHTAAIV++M    K NA  GKLFTWGDAD+G+LGH D + KLLPTCV
Sbjct: 420  KGSRVKSVACGPWHTAAIVEVM-SSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCV 478

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              L  +D +Q SCG  +TV LT  G V+T+GS+ HGQLGNPKA   SI  VEG LK EFV
Sbjct: 479  DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFV 538

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + ISSGS HVAVLT  G V+TWGK A GQLGLGD   R +PT VEAL  R VESVVCG +
Sbjct: 539  REISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFN 598

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TAAICLHK++S+ DQS CS C+M FGF RKKHNCYNCG  FCS+C++ KI  A+L P+ 
Sbjct: 599  FTAAICLHKTMSMKDQSVCSSCQMVFGFTRKKHNCYNCGSMFCSSCTSNKITMAALAPDT 658

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS----- 713
             +  RVCD C+  LQK+  S           ++   L+ S  E  K E  A TP      
Sbjct: 659  NRRYRVCDACFYQLQKVVDSS----------KDKSRLKISKGEMFKLELKAYTPKLSRLF 708

Query: 714  RGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKT 773
            +  +F +++  +V+       E A+++ +  +RWGQV CP  F +   + S +  P+  +
Sbjct: 709  KEANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECPALFIS--AQDSFQTQPVSNS 766

Query: 774  Q-------MSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
            +          H   + K  +   F   A   E ++ ++   L  +V++L  Q   L +Q
Sbjct: 767  EGCAISFSQRMHDSAVLKSGVSLRFTD-AQREEIEMMQTE--LQGQVKQLHSQVAVLTEQ 823

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEG- 885
            CQ  +  VQ  +QK+++ W + R+EA +CKAAK+IIK L  + + LSEK+S  + ++   
Sbjct: 824  CQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQCNALSEKLSIGQLSENSK 883

Query: 886  VDANLPPKLDTDKHPEVKLPKD---RKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSV- 941
            +  N  P   T    +    ++   RK+  L ++     N   S+   + C   S+  V 
Sbjct: 884  ITPNSIPMQPTKIELQGNTGRNLVTRKLGQLNNT----QNHGSSIQTEKECVPLSNAVVP 939

Query: 942  EDSKVARTEPQQKGTKASKLEYA-----------EQYEPGIYITFTTLPSGQKGLKRVRF 990
            ED   ++    +K +       A           EQ E G+Y+TF+T   G+K +KR+RF
Sbjct: 940  EDVPFSQQNGARKFSSDGYTTEAPLAAPPTDSVTEQIEHGVYVTFSTSSCGKKDIKRIRF 999

Query: 991  SRRRFTEKAAERWWEENQVVVYQKYGIEEYSN 1022
            SR+ F EK A+ WWE N+  VY  Y +E+ + 
Sbjct: 1000 SRKHFGEKEAQHWWEHNKTRVYDNYKVEQMAT 1031


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/1052 (40%), Positives = 600/1052 (57%), Gaps = 98/1052 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DEK L+WYS  +EK L LNSV+ +++GQ+T                             I
Sbjct: 46   DEKTLVWYSKDREKHLSLNSVSTVVLGQKT-----------------------------I 76

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            C+D+ QAE WFLGL A  SS       +  +  R + SC  SP SY++RK  L    D  
Sbjct: 77   CRDRDQAECWFLGLTALTSSPYSPLPLAGSKSGRQINSCAISPRSYLQRKCRLSAALDTP 136

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITP--SSPHMET 179
              +QV    GSP   + ++ F   L  S   FY    +S  I +    + P  ++P    
Sbjct: 137  RHTQVYPSYGSP--KIQKKIFGGNLDSSEALFYPRHPTSCDIDSYIEKLNPKIATP---V 191

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE-RKDILKDVMIWGEGVLGGDIGGAVD 238
            ++ +K ++  A+ R  +N +H     T+  P +  R D LKDV +WG  VLG  +G    
Sbjct: 192  KHGLK-DIMVANRRA-QNITHTPKLKTFEGPRVACRLDSLKDVFLWGS-VLGSMLGSE-- 246

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
                     +   LP+L+ SA MLDVQ+I+ G  HAA++TK+GEV+ WG    GRL  KV
Sbjct: 247  --------DIPKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKV 298

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            N++ SCPK+VE L+ ++V++V+ G   TCA+T SGE++ WG   H   L+ +   R+ W 
Sbjct: 299  NVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWF 358

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P K    +D + VSK+ACGEWHTAI+++SGQLFTYGDGTFGVLGHG+ Q V++PKEVESL
Sbjct: 359  PHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL 418

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +G +VKSVACGPWHTAAIV++M    K NA  GKLFTWGDAD+G+LGH D + KLLPTCV
Sbjct: 419  KGSRVKSVACGPWHTAAIVEVM-SSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCV 477

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              L  +D +Q SCG  +TV LT  G V+T+GS+ HGQLGNPKA   SI  VEG LK EFV
Sbjct: 478  DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFV 537

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + ISSGS HVAVLT  G V+TWGK A GQLGLGD   R +PT VEAL  R VESVVCG +
Sbjct: 538  REISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFN 597

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TAAICLHK++S+ DQS CS C+M FGF RK+HNCYNCG  FCS+C++ KI  A+L P+ 
Sbjct: 598  FTAAICLHKTMSMKDQSVCSSCQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDT 657

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS----- 713
             +  RVCD C+  LQK+  S           ++   L+ S  E  K E  A TP      
Sbjct: 658  NRRYRVCDACFYQLQKVVDSS----------KDKSRLKISKGEMFKLELKAYTPKLSRLF 707

Query: 714  RGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKT 773
            +  +F +++  +V+       E A+++ +  +RWGQV CP  F +   + S +  P+  +
Sbjct: 708  KEANFFAEKMASVQGTNQRNEEPATAVQTKTERWGQVECPALFIS--AQDSFQTQPVSNS 765

Query: 774  Q-------MSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
            +          H   + K  +   F   A   E ++ ++   L  +V++L  Q   L +Q
Sbjct: 766  EGCAISFSQRMHDSAVLKSGVSLRFTD-AQREEIEMMQTE--LQGQVKQLHSQVAVLTEQ 822

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEG- 885
            CQ  +  VQ  +QK+++ W + R+EA +CKAAK+IIK L  + + LSEK+S  + ++   
Sbjct: 823  CQQKSVMVQLYKQKLDDTWLVVRDEAARCKAAKDIIKVLTDQCNALSEKLSIGQLSENSK 882

Query: 886  VDANLPPKLDTDKHPEVKLPKD---RKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSV- 941
            +  N  P   T    +    ++   RK+  L ++     N   S+   + C   S+  V 
Sbjct: 883  ITPNSIPMQPTKIELQGNTGRNLVTRKLGQLNNT----QNHGSSIQTEKECVPLSNAVVP 938

Query: 942  EDSKVARTEPQQKGTKASKLEYA-----------EQYEPGIYITFTTLPSGQKGLKRVRF 990
            ED   ++    +K +       A           EQ E G+Y+TF+T   G+K +KR+RF
Sbjct: 939  EDVPFSQQNGARKFSSDGYTTEAPLAAPPTDSVTEQIEHGVYVTFSTSSCGKKDIKRIRF 998

Query: 991  SRRRFTEKAAERWWEENQVVVYQKYGIEEYSN 1022
            SR+ F EK A+ WWE N+  VY  Y +E+ + 
Sbjct: 999  SRKHFGEKEAQHWWEHNKTRVYDNYKVEQMAT 1030


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/1056 (41%), Positives = 612/1056 (57%), Gaps = 72/1056 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V++I+ GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 53   DESVLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+  IS   + R +        + S  +SP +Y RR          N
Sbjct: 111  CKDKDEAEVWFAGLKTLISHSHQ-RKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSN 169

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              + +D ++  ++RS  GSP  +  ++ FSD + Y+     F+ S+S++  + ++S    
Sbjct: 170  DSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMS---- 225

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
              S H +  N     +     R   + +    +   G    +  D L DV IWGEG   G
Sbjct: 226  --SGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGH---DDGDALGDVFIWGEGTGEG 280

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG      S +  ++D L+PK LE AV LDVQNIS G +HAALVTK+GE++ WGE   
Sbjct: 281  ILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESG 340

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV+ PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG       L+G  
Sbjct: 341  GRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHG 400

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+  ++S 
Sbjct: 401  NDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSV 460

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRLGH D +
Sbjct: 461  PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKD 520

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             + +PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQLGNP+A       VE
Sbjct: 521  SRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVE 580

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG G + ++ TPT VEAL+D+QV
Sbjct: 581  GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQV 640

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
             SVVCG + TAAIC+HK +S  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK +
Sbjct: 641  RSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSL 700

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEE---- 706
             ASL PN  KP RVCD+CY+ L K      L    N S +    +QG  SE  +EE    
Sbjct: 701  KASLAPNPNKPYRVCDSCYSKLTK-----GLETDTNSSTKRGTVVQG-FSETNEEELETR 754

Query: 707  --KGALTPSRGQSFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-THCH 761
                 L  S  +SF +  SR  ++       S   S + +G   W  ++    F      
Sbjct: 755  SNTQLLRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGS 814

Query: 762  EKSVEPTPIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESNKML 809
             K      +P +++ +   SP+              +LG    P    +  D   +N  L
Sbjct: 815  SKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP--RVIANDAKPTNDSL 872

Query: 810  NEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
            + EV  LR Q  NL ++  +   +++   ++++EA  +A EE  KCKAAKE+IK+L  +L
Sbjct: 873  SHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQL 932

Query: 870  HTLSEKISAAKEAKEGVDAN--LPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSV 927
              ++E++        GV  N  LPP        E+       + S  S     SN     
Sbjct: 933  KGMAERLPG------GVTKNSKLPPLSGFPMPSELSSMATESLGSPSSVGEQISNGPNG- 985

Query: 928  YGRELCHDNSSGSVEDSKVARTEPQQKGTK------ASKLEYAEQYEPGIYITFTTLPSG 981
                L   N   SV   K    E  + G++        + E+ EQ EPG+YIT T LP G
Sbjct: 986  ----LLASNGPSSVR-IKAGHPEVGKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGG 1040

Query: 982  QKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             + LKRVRFSR+RF+E  AE+WW+EN+  VYQ Y +
Sbjct: 1041 ARDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNV 1076


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/1055 (41%), Positives = 612/1055 (58%), Gaps = 70/1055 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V++I+ GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 53   DESVLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+  IS   + R +        + S  +SP +Y RR          N
Sbjct: 111  CKDKDEAEVWFAGLKTLISHSHQ-RKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSN 169

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              + +D ++  ++RS  GSP  +  ++ FSD + Y+     F+ S+S++  + ++S    
Sbjct: 170  DSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMS---- 225

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
              S H +  N     +     R   + +    +   G    +  D L DV IWGEG   G
Sbjct: 226  --SGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGH---DDGDALGDVFIWGEGTGEG 280

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG      S +  ++D L+PK LE AV LDVQNIS G +HAALVTK+GE++ WGE   
Sbjct: 281  ILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESG 340

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV+ PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG       L+G  
Sbjct: 341  GRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHG 400

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+  ++S 
Sbjct: 401  NDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSV 460

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRLGH D +
Sbjct: 461  PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKD 520

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             + +PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQLGNP+A       VE
Sbjct: 521  SRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVE 580

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG G + ++ TPT VEAL+D+QV
Sbjct: 581  GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQV 640

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
             SVVCG + TAAIC+HK +S  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK +
Sbjct: 641  RSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSL 700

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG--SLSEEVKEEKG 708
             ASL PN  KP RVCD+CY+ L K      L    N S +    +QG    +EE  E + 
Sbjct: 701  KASLAPNPNKPYRVCDSCYSKLTK-----GLETDTNSSTKRGTVVQGFSETNEEELETRS 755

Query: 709  ALTPSR---GQSFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-THCHE 762
                SR    +SF +  SR  ++       S   S + +G   W  ++    F       
Sbjct: 756  NTQLSRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSS 815

Query: 763  KSVEPTPIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESNKMLN 810
            K      +P +++ +   SP+              +LG    P    +  D   +N  L+
Sbjct: 816  KKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP--RVIANDAKPTNDSLS 873

Query: 811  EEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLH 870
             EV  LR Q  NL ++  +   +++   ++++EA  +A EE  KCKAAKE+IK+L  +L 
Sbjct: 874  HEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQLK 933

Query: 871  TLSEKISAAKEAKEGVDAN--LPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVY 928
             ++E++        GV  N  LPP        E+       + S  S     SN      
Sbjct: 934  GMAERLPG------GVTKNSKLPPLSGFPMPSELSSMATESLGSPSSVGEQISNGPNG-- 985

Query: 929  GRELCHDNSSGSVEDSKVARTEPQQKGTK------ASKLEYAEQYEPGIYITFTTLPSGQ 982
               L   N   SV   K    E  + G++        + E+ EQ EPG+YIT T LP G 
Sbjct: 986  ---LLASNGPSSVR-IKAGHPEVGKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGA 1041

Query: 983  KGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + LKRVRFSR+RF+E  AE+WW+EN+  VYQ Y +
Sbjct: 1042 RDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNV 1076


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/1055 (41%), Positives = 611/1055 (57%), Gaps = 70/1055 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V++I+ GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 53   DESVLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+  IS   + R +        + S  +SP +Y RR          N
Sbjct: 111  CKDKDEAEVWFAGLKTLISHSHQ-RKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSN 169

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              + +D ++  ++RS  GSP  +  ++ FSD + Y+     F+ S+S++  + ++S    
Sbjct: 170  DSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMS---- 225

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
              S H +  N     +     R   + +    +   G    +  D L DV IWGEG   G
Sbjct: 226  --SGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGH---DDGDALGDVFIWGEGTGEG 280

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG      S +  ++D L+PK LE AV LDVQNIS G +HAALVTK+GE++ WGE   
Sbjct: 281  ILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESG 340

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV+ PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG       L+G  
Sbjct: 341  GRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHG 400

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+  ++S 
Sbjct: 401  NDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSV 460

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVDGE 470
            P+EVESL+GL+    ACG WHTAA+V++MV    S+    GK+FTWGD DKGRLGH D +
Sbjct: 461  PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKD 520

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             + +PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQLGNP+A       VE
Sbjct: 521  SRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVE 580

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG G + ++ TPT VEAL+D+QV
Sbjct: 581  GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQV 640

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
             SVVCG + TAAIC+HK +S  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK +
Sbjct: 641  RSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSL 700

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG--SLSEEVKEEKG 708
             ASL PN  KP RVCD+CY+ L K      L    N S +    +QG    +EE  E + 
Sbjct: 701  KASLAPNPNKPYRVCDSCYSKLTK-----GLETDTNSSTKRGTVVQGFSETNEEELETRS 755

Query: 709  ALTPSR---GQSFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-THCHE 762
                SR    +SF +  SR  ++       S   S + +G   W  ++    F       
Sbjct: 756  NTQLSRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSS 815

Query: 763  KSVEPTPIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESNKMLN 810
            K      +P +++ +   SP+              +LG    P    +  D   +N  L+
Sbjct: 816  KKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP--RVIANDAKPTNDSLS 873

Query: 811  EEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLH 870
             EV  LR Q  NL ++  +   +++   ++++EA  +A EE  KCKAAKE+IK+L  +L 
Sbjct: 874  HEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQLK 933

Query: 871  TLSEKISAAKEAKEGVDAN--LPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVY 928
             ++E++        GV  N  LPP        E+       + S  S     SN      
Sbjct: 934  GMAERLPG------GVTKNSKLPPLSGFPMPSELSSMATESLGSPSSVGEQISNGPNG-- 985

Query: 929  GRELCHDNSSGSVEDSKVARTEPQQKGTK------ASKLEYAEQYEPGIYITFTTLPSGQ 982
               L   N   SV   K    E  + G++        + E+ EQ EPG+YIT T LP G 
Sbjct: 986  ---LLASNGPSSVR-IKAGHPEVGKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGA 1041

Query: 983  KGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + LKRVRFSR+RF+E  AE+WW+EN+  VYQ Y +
Sbjct: 1042 RDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNV 1076


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/1055 (41%), Positives = 612/1055 (58%), Gaps = 96/1055 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYSG++EKQL+LN+V++II GQRT  FQ  P+P+++ QSFS+IY  G+RSLDLI
Sbjct: 46   DESMLIWYSGKEEKQLKLNNVSRIIPGQRTPIFQRYPRPEKEYQSFSLIY--GDRSLDLI 103

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK +AE WF+GL+  IS     +  S +R+   + S   SP S  RR        D  
Sbjct: 104  CKDKDEAEVWFIGLKGLISRGNYRKWRSEIRDD-SISS--ESPHSRARRISPSLSSSDPG 160

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSY--SSDSFYSSESSSSQIQNLSNIITPSSPHM-- 177
            +  Q +    +   S   + FSD +SY  S+ SF  +ES +S + +LS+    +S     
Sbjct: 161  DTQQTQVTFENIPQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTS 220

Query: 178  ETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAV 237
             +ENF          R   + +    +   G    +  D L DV +WGEG+  G +G  V
Sbjct: 221  ASENF----------RVSLSSAVSSSSQGSGH---DDFDALGDVFMWGEGIGDGIMGAGV 267

Query: 238  DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
                S + T++DALLPK LES V+LDV +I+ G KHA LVTK+GEVF WGE    RLGH 
Sbjct: 268  HRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHG 327

Query: 298  VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
            V +DVS PKL++ L G+N++ V+CGE+ +CA+T SG++YTWG   H + L+G     SHW
Sbjct: 328  VEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHW 387

Query: 358  LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            +P+K+   ++G+ VS VACG WHTA+V+++GQLFT+GDGTFG LGHG+  ++S P+EVE+
Sbjct: 388  IPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEA 447

Query: 418  LRGLKVKSVACGPWHTAAIVDIMV----DRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            LRG +   VACG WHTAA+V++M+         ++  GKLFTWGD DKGRLGH D E +L
Sbjct: 448  LRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRL 507

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
            +P  VT L++  F Q +CG  L+V LT  G+VYTMGSAV+GQLG+P A  +  T+VEGK+
Sbjct: 508  VPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKI 567

Query: 534  KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
               FV+ ++ GSYHVAVLTS   VYTWGK  NGQLG GD+  R TPT V+ L+D+QV++V
Sbjct: 568  ANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627

Query: 594  VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINAS 653
            VCG + TAAI LHK +S  D S CS C   FGFRRK+HNCYNCGL FC+ CS++K + AS
Sbjct: 628  VCGLNFTAAISLHKWVSCADHSICSGCHNQFGFRRKRHNCYNCGLVFCNTCSSRKSLKAS 687

Query: 654  LTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVK---EEKGAL 710
            L PN  KP RVCD C+  L+K   SG +L+       N+L     ++E        +G L
Sbjct: 688  LAPNMNKPYRVCDDCFTKLKKAMESGSVLRIPKARSSNILQKSNEIAERDTMGPRVQGQL 747

Query: 711  TP-SRGQSFTSKQSR---------------------NVERKPGECLESASSLSSGLQRWG 748
            +  S   SF+  +S+                     NV+R      + ++SL  G ++  
Sbjct: 748  SRLSSVDSFSRAESKHYKCDTKLEFNDARVSPHLNGNVQRGSFHSSKLSNSLFGGSRKIF 807

Query: 749  QVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKM 808
              S P          S   +P+        S +L   SL     P A+  + D   +N  
Sbjct: 808  SASRP-----GSRIVSRATSPVSGKSSPPQSAML-AASLAVVRSPEAT--DDDPKHTNDS 859

Query: 809  LNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVR 868
            L+ E+  LR Q  NL  + QI   +++   +K++E  ++A  EAEKCKAAKE+IK+L  +
Sbjct: 860  LSREIINLRAQVENLTGKSQILEAELERSSRKLKEVTAVAEGEAEKCKAAKEVIKSLTAQ 919

Query: 869  LHTLSEKISA--AKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKS 926
            L  ++E++       +K G  A   P +               VD       +FSN+   
Sbjct: 920  LKEMAERVPEEHISISKSGSSARQTPNI---------------VD-------MFSNE--- 954

Query: 927  VYGRELCHDNSSGSVE-DSKVARTEP-QQKGTKA--SKLEYAEQYEPGIYITFTTLPSGQ 982
                   H  S  S E +S  +   P    GTKA   K ++  Q EPG+Y+T ++L  G 
Sbjct: 955  ------NHSTSLTSPESESNGSSVNPILSSGTKAQTEKSDWVVQDEPGVYLTLSSLAGGG 1008

Query: 983  KGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
              L+RVRFSR+RFTE+ AE WW EN   V +++ I
Sbjct: 1009 NELRRVRFSRKRFTEEQAEVWWAENGSKVCERHDI 1043


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1089 (39%), Positives = 614/1089 (56%), Gaps = 109/1089 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW S   E+ L+L+SV++II GQRT  FQ    P++   SFS+IY NG+RSLDLI
Sbjct: 46   DELSLIWISSSGERNLKLSSVSRIIPGQRTAVFQRYLCPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDKV+AE W  GL+A ISS +  R+        G+         Y+    +L     + 
Sbjct: 106  CKDKVEAEVWIAGLKALISSGQGGRSKIDGWSDGGL---------YLDDSRDLTSNSPSE 156

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSP-HMETE 180
              + V     SP +S+S       L+ +S   +  ES+     N+     PS+P +M+ +
Sbjct: 157  SSASVSRDISSPDVSVS-------LANTSPQSFYFEST----LNIERSHAPSNPSNMQVK 205

Query: 181  NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
                     + +  P   SH      Y        D L DV IWGE +    +    + S
Sbjct: 206  GSSSDVFRVSVSSAPSTSSHGSAPDDY--------DALGDVYIWGEVICENVVKVGAEKS 257

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
             S    + D LLP+ LES V+LDV  I+ G KHAALVT++GE+F WGE   GRLGH V  
Sbjct: 258  ASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGK 317

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            +V  P+LVE ++   V  V+CGEF TCA+T +GE+YTWG   H A L+G     SHW+P+
Sbjct: 318  NVIQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPK 377

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            ++   L+G++V+ V CG WHTA+++++GQLFT+GDGTFGVLGHG+ +NVS P+EVESL G
Sbjct: 378  RIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSG 437

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            L+  +VACG WHTAA+V+++V +  ++    KLFTWGD DK RLGH D + +L PTCV+ 
Sbjct: 438  LRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSL 497

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            L+D +F + +CG  LTVGLT  G+V+TMGS+V+GQLGNP++  +   +V+ KL  E V+ 
Sbjct: 498  LIDSNFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEE 557

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            I+ G+YHVAVLTS   VYTWGK ANG+LG GD ++R+TPT VEAL+DR V+ + CGS+ +
Sbjct: 558  IACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYS 617

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
            AAICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +CS++K + ASL PN GK
Sbjct: 618  AAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRASLAPNPGK 677

Query: 661  PSRVCDTCYNHLQKITHSGRLLKQENQSPRNLL-NLQGSLSEEVKEEKGALTPSRGQSFT 719
            P RVCD+C+  L K+  SG      N + RN +  L G   + +++ +  LT +   S  
Sbjct: 678  PYRVCDSCFVKLIKVAESG------NNNRRNAMPRLSGENKDRLEKSELRLTKTAVPSNM 731

Query: 720  SKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFK-----THCHEKSVEPTPI--PK 772
                +   +   +  + A + S  L R  Q    ++ K     T    K   P P+  P 
Sbjct: 732  DLIKQLDSKAAAKQGKKADTFS--LVRTSQPQSLLQLKDVVLSTAIDLKRTAPRPVLTPS 789

Query: 773  TQMS-THSPLLRKISLGSNFIPIAST--------VEKDLSESNKMLNEEVQRLRDQARNL 823
               S + SP  R+ S   +  PI +T        +   L ++N++LN+EV +LR Q   L
Sbjct: 790  GVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQVETL 849

Query: 824  EKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI-SAAKEA 882
             ++C++   ++Q   +K +EA +LA EE+ K KAAKE+IK+L  +L  L+E++   A +A
Sbjct: 850  RQRCELQELELQRSTKKTQEAMALAAEESAKSKAAKEVIKSLTAQLKDLAERLPPGAYDA 909

Query: 883  KEGVDANLPPKLDTD--KHPEVKLPKDRKVDSLCSSPIV-----------FSNKLKSVYG 929
            +    A LP  L+ +   +PE+   +  + +S+  S +                L   YG
Sbjct: 910  ENIRPAYLPNGLEPNGIHYPELNGERHTRAESISGSSLASIGLESSLLNRTEGTLPGSYG 969

Query: 930  RELCHDN--------------------------SSGSVEDSKVART----EPQQKGTKAS 959
              L   N                          SS +V D    R     +  + G ++ 
Sbjct: 970  ANLYLQNRGSVTSNGTDDYPNVKLPNGSSMIQPSSSTVSDMVDGRDSGDFQDDESGLRSR 1029

Query: 960  -----------KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
                       + E+ EQYEPG+YIT   L  G + LKRVRFSRRRF E  AE WW EN+
Sbjct: 1030 NTIVPANSNQVEAEWIEQYEPGVYITLVALGDGTRDLKRVRFSRRRFGEHQAETWWSENR 1089

Query: 1009 VVVYQKYGI 1017
              VY++Y +
Sbjct: 1090 DRVYERYNV 1098


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1072 (40%), Positives = 623/1072 (58%), Gaps = 69/1072 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYSG +EK+L L++V++II GQRT  F   P+P+++ QS S++++N ERSLD+I
Sbjct: 46   DENALIWYSGGEEKRLWLSTVSRIIPGQRTPVFLRYPRPEKECQSLSLLHSNEERSLDVI 105

Query: 62   CKDKVQAESWFLGLRAAISSCR-RSRTFSCLREKRGVQSCVSSPASYIRRKHNL------ 114
            CKDK +AE WF+GL+A+++  + R   F+ +R +R V   + SPA   R    L      
Sbjct: 106  CKDKDEAEVWFVGLKASVAGAQLRKSKFNNVRHERTVD--IVSPA-LTRNSSPLTSPFGS 162

Query: 115  --GLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITP 172
               L +++ +  +  S  GSP  S  E+ +  G + + DS  + ++ S      S   + 
Sbjct: 163  TDNLQQESGDFFKTSSFIGSPLQS--EKGYLGGPTSTIDSKNNFDAGSVGGSMHSGSSSM 220

Query: 173  SSPHMETENFMKWELNYADTRCPKNESHRLVTPT--YGSPLIERKDILKDVMIWGEGVLG 230
             S  +     +       + R   + +    + +  +G   +   + L DV +WGEGV  
Sbjct: 221  GSDSVSAHLRLAGAGQSDNYRISMSSAVSSSSQSSQHGEDGLHYAEPLGDVYMWGEGVGD 280

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG +    S     +DALLPK LESA++LDVQ I+ G KHAALVTK+GEVF WGE  
Sbjct: 281  GILGGGIHRIGSGGAINLDALLPKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEES 340

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
             GRLGH V+ DVS P+LVE L+    + V+CGE+  CA+T SG++Y+WG   H   L+G 
Sbjct: 341  GGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGH 400

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                SHW+P+++   L+G+RV+ +ACG WHTA+V+T+G LFT+GDGTFGVLGH + ++  
Sbjct: 401  GNDISHWIPKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAY 460

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG-KLFTWGDADKGRLGHVDG 469
             P+EVESL+GL+    ACG WHTAA+V++MV    + +    KLFTWGD +KGRLGH D 
Sbjct: 461  SPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDK 520

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E++L+PTCV  LVD +F Q +CG  LTV LT  G V+TMGS+ +GQLG+P+A  +   +V
Sbjct: 521  EQRLVPTCVAALVDHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKLPGLV 580

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EGKL E +V+ I+ G++HVAVLT    VYTWGK ANG+LG GD ++R TPT VEAL+++Q
Sbjct: 581  EGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQ 640

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CG++ TAAICLHK +S  DQ++CS C+ PFGF RK+HNCYNCGL +C ACS+KK 
Sbjct: 641  VKSIACGATFTAAICLHKWLSGADQNACSGCKQPFGFTRKRHNCYNCGLVYCHACSSKKA 700

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + ASL PN GKP RVCD C+  L+K    G L      S R++ N    +  +    KG 
Sbjct: 701  LKASLAPNPGKPFRVCDPCFLKLRKAGEGG-LGGVAALSKRSVPNRNRGVEVKDGSGKGE 759

Query: 710  LTPSRGQSFT-------------------SKQSRNVERKPGECLESASSLSSGLQRWGQV 750
                R Q                      +K+ +  E        + + +SSG   WG V
Sbjct: 760  FRAPRPQGPNTGRPPITLEFGKVGEGKSGTKRGKKPENSSSRISPAPNGVSSGAT-WGAV 818

Query: 751  SCPIRFKTHCHEKSVE-PTPIPKTQMSTH------SPL---------LRKISLGSNFIPI 794
            S P  F     +  +  P  +  + ++        SPL               GS  + I
Sbjct: 819  SVPAGFSKPPFQTGLNGPVAVSSSAVAGRAVSRAVSPLSRRSSPPRSTTPTPTGSGLV-I 877

Query: 795  ASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEK 854
              TV +DL ++N  L++E  +LR Q  +L +Q Q   ++VQ   Q+++ A SLA EEA K
Sbjct: 878  PKTVVEDLKKTNDALSDENIQLRSQVESLARQLQNHEKEVQRSAQQLQNAISLATEEAAK 937

Query: 855  CKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLC 914
             +AAKE+IK+L  +L  ++EK+      +    +    +LD               D+L 
Sbjct: 938  SRAAKEVIKSLTSQLKEMAEKLPTGTFRQFHSRSGSLSRLDVSN----SALGSADFDALG 993

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYIT 974
            +   V S  L   +  +    N + +V D +          +K  + E+ EQ EPG+YIT
Sbjct: 994  A---VGSEGLGLPF--QQFSSNPAINVPDFEANGVASPHSASKP-ETEWVEQDEPGVYIT 1047

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY----GIEEYSN 1022
             T LP G K LKRVRFSR+RF+E+ AE+WW EN+V V+++Y    G++  SN
Sbjct: 1048 LTALPGGGKDLKRVRFSRKRFSEREAEQWWAENRVRVHEQYNVRGGVDRGSN 1099


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/1067 (41%), Positives = 625/1067 (58%), Gaps = 84/1067 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY+  +RSLDLI
Sbjct: 49   DESVLIWISGKEEKHLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYS--DRSLDLI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKR---GVQSCVSSPASYIRRKHNLGL-- 116
            CKDK +AE WF GL+A IS+    R     RE+    G+ S  +SP +Y  R   L    
Sbjct: 107  CKDKEEAEVWFTGLKALISN----RQIWKKREETTNDGLLSEANSPRAYTIRSSPLSFAF 162

Query: 117  ------LEDATELSQVRSLCGSPSLSLSERCFSDGL-SYSSDSFYSSESS----SSQIQN 165
                  L+D  +  ++R+   SP  +  E+  SD + +      +  ES+     SQ+  
Sbjct: 163  GSDDSSLKDGMDPLRLRTPYDSPPNTGLEKALSDVVYTVPPKVLFPLESACAPAQSQLLG 222

Query: 166  LSNIITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWG 225
             S+  T  +    T+NF          R   + +    +   G    +  D L DV IWG
Sbjct: 223  GSDETTGRAKVTNTDNF----------RVSLSSAVSSSSQGSGR---DENDALGDVYIWG 269

Query: 226  EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
            EG   G +GG V   +  +  Q+D+ +PK LESAV+LDVQ I+ G +HAALVTK+GEVF 
Sbjct: 270  EGTGDGILGGGVH-RIGGSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFS 328

Query: 286  WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
            WGE   GRLGH V+ DVS PK V+ L   NV+ V+CGE+ +CA+T SG++Y WG N +  
Sbjct: 329  WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNF 388

Query: 346  DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
             L+G     + W+PRKL   L+G+ VS V+CG WHTA+V+++GQLFT+GDGTFGVLGHG+
Sbjct: 389  GLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448

Query: 406  LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRL 464
              +VS P+EVESL+GL+    ACG WHTAA+V+IMV     SN   GKLFTWGD DK RL
Sbjct: 449  RISVSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRL 508

Query: 465  GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            GH D E +L+PTCV  LV+ +F Q +CG  LT  LT  G+VYTMGS V+GQLGNP+A   
Sbjct: 509  GHGDKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGM 568

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
              T VEGKL + FV+ ++ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +P+ VEA
Sbjct: 569  LPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDADDRNSPSVVEA 628

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSAC 644
            L+D+QV+ +VCG+S TAAICLHK +S  DQS CS C +PF F+RK+HNCYNCGL FC +C
Sbjct: 629  LKDKQVKGIVCGTSFTAAICLHKWVSGIDQSMCSGCHLPFNFKRKRHNCYNCGLVFCHSC 688

Query: 645  STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVK 704
            S KK + AS+ PN  KP RVCD C + L++ + +       + S  + L+ +GS+++ + 
Sbjct: 689  SNKKSLKASMAPNPNKPYRVCDNCLSKLRRSSET-------DSSVHSALSRRGSVNQGLN 741

Query: 705  E--EKGALTPSR-----GQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQ-VSCPIRF 756
            E  EK   + S+     G++F+ + S+ VE         ++S S  +   G  VS    F
Sbjct: 742  EVAEKTENSNSKSHAKLGRNFSMESSKEVESISSRRNRKSNSNSIQVSPSGNDVSRRNTF 801

Query: 757  ---KTHCHEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIPIASTVEKDLSE------- 804
               K+    K      +P +++ +   SP  R+ S      P  +    +L +       
Sbjct: 802  NNSKSFGSSKKFFSASLPGSRIVSRATSPTSRRSSPPRAATPTPTLSANELPKLAVDGAG 861

Query: 805  -SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIK 863
              N  L EE+ +LR Q   L  + Q+ + +++   ++++EA ++A EE  KCKAAKE+IK
Sbjct: 862  RLNDSLREEIVKLRAQVEELTNKAQLQDVELERTTKQLKEAIAVAEEETTKCKAAKEVIK 921

Query: 864  ALAVRLHTLSEKISAAKEAKEGVDA------NLPPKLDTDKHPEVKLPKD-RKVDSLCSS 916
            +L  +L  ++E++           +        P  +      ++  P    + DS  S+
Sbjct: 922  SLTAQLKEVAERVPVGASRNSNSPSFYCSSNTTPWDVSPGILEQLSSPTACHEQDSKGSN 981

Query: 917  PIVFSN-KLKSVYGRELCHDNSSGSVEDS-----KVARTEPQQKGTKASKLEYAEQYEPG 970
             +V SN    +    +  H +    +E +     ++A+ EP          E+ EQ EPG
Sbjct: 982  SLVISNVSGTTTTTNQTPHHSEVTQIETTVRNKNRIAKVEPTNGD------EWVEQDEPG 1035

Query: 971  IYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            +YIT  +L  G K LKRVRFSR+RF+EK AE+WW  N+  VYQ+Y +
Sbjct: 1036 VYITLVSLHGGAKDLKRVRFSRKRFSEKQAEQWWAANRARVYQQYNV 1082


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1029 (42%), Positives = 611/1029 (59%), Gaps = 99/1029 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANG--ERSLD 59
            DE  LIW+SG+KE+QLRL++VTKII GQRT NFQ  P+P+++ QSFS+IY +G  ERSLD
Sbjct: 56   DETTLIWFSGRKERQLRLDAVTKIIPGQRTANFQRYPRPEKEYQSFSLIYGSGGEERSLD 115

Query: 60   LICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            LICKDK +AE WF+GL+A +SS   +RT     +  G  S V+SP     R   L   + 
Sbjct: 116  LICKDKDEAEVWFVGLKARVSS---NRTLKVDNKSEGTLSDVNSPLGRALRDSPLNSYD- 171

Query: 120  ATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMET 179
                S  RS  GSPSL  +                   +S+ ++Q++ +  + S    E+
Sbjct: 172  ----SFNRSPYGSPSLFKT-------------------ASTGELQSVESAKSDSLASEES 208

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDG 239
             N     ++ AD       S    +     P  E  D L DV IWGEG   G +GG V  
Sbjct: 209  LNAQGRSVSLADAFRVSMSSAVSSSSQGSGP--EDSDALGDVFIWGEGAGEGFLGGGVCK 266

Query: 240  SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
              S   ++VD+L+PK L++AV+LDV +I+ G++HAALVTK+G+VFCWGE   GRLGH ++
Sbjct: 267  LTSGAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGID 326

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            +DVS P+LV+ L+G+N + V+CG+F TCA+T SGE+YTWG +     LVG     SHW+P
Sbjct: 327  VDVSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP 386

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            +++   L+GVR+S +ACG WHTA+VS++GQLFT+GDGTFGVLGHG+ +N++ PKEVESL+
Sbjct: 387  KRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLK 446

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAI-GGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            GLK    ACG WHTAA+V+++V    + +   GKLFTWGD DK RLGH D E+KL+PTCV
Sbjct: 447  GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCV 506

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              LVD++F Q +CG  LTV LT  G+V+TMGS ++GQLGNPKA  +   +V+G+L   FV
Sbjct: 507  AALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFV 566

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + I  G++HVA L+S   +YTWGK ANG+LG GD ++R  PT VEALRD+QV++V CGSS
Sbjct: 567  EEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSS 626

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TA ICLHK +S  DQS CS C+  FGF RK+HNCYNCGL +C +CS+KK   ASL PN 
Sbjct: 627  FTAVICLHKPVSDADQSVCSGCKQAFGFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNP 686

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
             K  RVC+ C                       L  L+ S SEEV  +       R +  
Sbjct: 687  SKAYRVCEPC-----------------------LAKLERSASEEVARKSRKYMDGRERPL 723

Query: 719  TSKQSRNVERKP-GECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMST 777
              + S+ +E K  G    S ++     +    ++ P         K+V   P P  + +T
Sbjct: 724  I-RASKPIEMKQVGYYGNSRNTDDFAAKHQTVINIPTAIP---ERKAVSAKPSPP-RSAT 778

Query: 778  HSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQEC 837
             +P    ++   N          +L +  ++  +EV  L+ Q   L  + +   ++++  
Sbjct: 779  PTPTSAGLAPPGNG-------PDELQKKLELSRQEVLHLKTQISTLTSKYEQRERELRRG 831

Query: 838  QQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTD 897
             QK++EA  LA EE  KC+AAKE+IK+L V L  L+E++ +A+  ++  +    P     
Sbjct: 832  AQKVQEAVLLAGEETAKCRAAKEVIKSLTVELKELAERMPSARRQQQRQEV---PNGRHF 888

Query: 898  KHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTK 957
              PE ++  D +   L +SP                 ++++ +  D  V  + P+     
Sbjct: 889  PAPEAEI--DLR---LQTSPT--------------SSNSATDTTVDKLVLGSGPE----- 924

Query: 958  ASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
                E+ EQ + G+YIT    P G + LKRVRFSRRRF+EK AE+WW++N+V V+Q+Y I
Sbjct: 925  ----EWVEQDQAGVYITLALAPGGGRDLKRVRFSRRRFSEKEAEQWWQDNRVRVHQQYSI 980

Query: 1018 EEYSNLNQN 1026
               SN ++N
Sbjct: 981  IRTSNTSKN 989


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/1055 (41%), Positives = 611/1055 (57%), Gaps = 72/1055 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V++I+ GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 53   DESVLIWFSGKEEKHLRLSQVSRIVPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+  IS   + R +        + S  +SP +Y RR          N
Sbjct: 111  CKDKDEAEVWFAGLKTLISHSHQ-RKWRTESRSDIISSGATSPRTYTRRSSPLSSPFSSN 169

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              + +D ++  ++RS  GSP  +  ++ FSD + Y+     F+ S+S++  + ++S    
Sbjct: 170  DSVHKDGSDHYRLRSPFGSPPKNALDKAFSDVVLYAVPPKGFFPSDSNAGSVHSMS---- 225

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
              S H +  N     +     R   + +    +   G    +  D L DV IWGEG   G
Sbjct: 226  --SGHSDNTNGHPRGIPMDAFRVSYSSAISSSSHGSGH---DDGDALGDVFIWGEGTGEG 280

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG      S +  ++D L+PK LE AV LDVQNIS G +HAALVTK+GE++ WGE   
Sbjct: 281  ILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESG 340

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV+ PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG       L+G  
Sbjct: 341  GRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHG 400

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+  ++S 
Sbjct: 401  NDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSV 460

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRLGH D +
Sbjct: 461  PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKD 520

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             + +PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQLGNP+A       VE
Sbjct: 521  SRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVE 580

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG G + ++ TPT VEAL+D+QV
Sbjct: 581  GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQV 640

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
             SVVCG + TAAIC+HK +S  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK +
Sbjct: 641  RSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSL 700

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG--SLSEEVKEEKG 708
             ASL PN  KP RVCD+CY+ L K      L    N S +    +QG    +EE  E + 
Sbjct: 701  KASLAPNPNKPYRVCDSCYSKLTK-----GLETDTNSSTKRGTVVQGFSETNEEELETRS 755

Query: 709  ALTPSR---GQSFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-THCHE 762
                SR    +SF +  SR  ++       S   S + +G   W  ++    F       
Sbjct: 756  NTQLSRLSSMESFKNMDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSS 815

Query: 763  KSVEPTPIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESNKMLN 810
            K      +P +++ +   SP+              +LG    P    +  D   +N  L+
Sbjct: 816  KKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLGGLTSP--RVIANDAKPTNDSLS 873

Query: 811  EEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLH 870
             EV  LR Q  NL ++  +   +++   ++++EA  +A EE  KCKAAKE+IK+L  +  
Sbjct: 874  HEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGEETAKCKAAKEVIKSLTAQ-- 931

Query: 871  TLSEKISAAKEAKEGVDAN--LPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVY 928
             ++E++        GV  N  LPP        E+       + S  S     SN      
Sbjct: 932  GMAERLPG------GVTKNSKLPPLSGFPMPSELSSMATESLGSPSSVGEQISNGPNG-- 983

Query: 929  GRELCHDNSSGSVEDSKVARTEPQQKGTK------ASKLEYAEQYEPGIYITFTTLPSGQ 982
               L   N   SV   K    E  + G++        + E+ EQ EPG+YIT T LP G 
Sbjct: 984  ---LLASNGPSSVR-IKAGHPEVGKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGA 1039

Query: 983  KGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + LKRVRFSR+RF+E  AE+WW+EN+  VYQ Y +
Sbjct: 1040 RDLKRVRFSRKRFSETQAEQWWQENRTRVYQHYNV 1074


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1029 (42%), Positives = 611/1029 (59%), Gaps = 99/1029 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANG--ERSLD 59
            DE  LIW+SG+KE+QLRL++VTKII GQRT NFQ  P+P+++ QSFS+IY +G  ERSLD
Sbjct: 47   DETTLIWFSGRKERQLRLDAVTKIIPGQRTANFQRYPRPEKEYQSFSLIYGSGGEERSLD 106

Query: 60   LICKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            LICKDK +AE WF+GL+A +SS   +RT     +  G  S V+SP     R   L   + 
Sbjct: 107  LICKDKDEAEVWFVGLKARVSS---NRTLKVDNKSEGTLSDVNSPLGRALRDSPLNSYD- 162

Query: 120  ATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMET 179
                S  RS  GSPSL  +                   +S+ ++Q++ +  + S    E+
Sbjct: 163  ----SFNRSPYGSPSLFKT-------------------ASTGELQSVESAKSDSLASEES 199

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDG 239
             N     ++ AD       S    +     P  E  D L DV IWGEG   G +GG V  
Sbjct: 200  LNAQGRSVSLADAFRVSMSSAVSSSSQGSGP--EDSDALGDVFIWGEGAGEGFLGGGVCK 257

Query: 240  SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
              S   ++VD+L+PK L++AV+LDV +I+ G++HAALVTK+G+VFCWGE   GRLGH ++
Sbjct: 258  LTSGAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGID 317

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            +DVS P+LV+ L+G+N + V+CG+F TCA+T SGE+YTWG +     LVG     SHW+P
Sbjct: 318  VDVSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP 377

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            +++   L+GVR+S +ACG WHTA+VS++GQLFT+GDGTFGVLGHG+ +N++ PKEVESL+
Sbjct: 378  KRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLK 437

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAI-GGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            GLK    ACG WHTAA+V+++V    + +   GKLFTWGD DK RLGH D E+KL+PTCV
Sbjct: 438  GLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCV 497

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              LVD++F Q +CG  LTV LT  G+V+TMGS ++GQLGNPKA  +   +V+G+L   FV
Sbjct: 498  AALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFV 557

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + I  G++HVA L+S   +YTWGK ANG+LG GD ++R  PT VEALRD+QV++V CGSS
Sbjct: 558  EEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSS 617

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TA ICLHK +S  DQS CS C+  FGF RK+HNCYNCGL +C +CS+KK   ASL PN 
Sbjct: 618  FTAVICLHKPVSDADQSVCSGCKQAFGFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNP 677

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
             K  RVC+ C                       L  L+ S SEEV  +       R +  
Sbjct: 678  SKAYRVCEPC-----------------------LAKLERSASEEVARKSRKYMDGRERPL 714

Query: 719  TSKQSRNVERKP-GECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMST 777
              + S+ +E K  G    S ++     +    ++ P         K+V   P P  + +T
Sbjct: 715  I-RASKPIEMKQVGYYGNSRNTDDFAAKHQTVINIPTAIP---ERKAVSAKPSPP-RSAT 769

Query: 778  HSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQEC 837
             +P    ++   N          +L +  ++  +EV  L+ Q   L  + +   ++++  
Sbjct: 770  PTPTSAGLAPPGNG-------PDELQKKLELSRQEVLHLKTQISTLTSKYEQRERELRRG 822

Query: 838  QQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTD 897
             QK++EA  LA EE  KC+AAKE+IK+L V L  L+E++ +A+  ++  +    P     
Sbjct: 823  AQKVQEAVLLAGEETAKCRAAKEVIKSLTVELKELAERMPSARRQQQRQEV---PNGRHF 879

Query: 898  KHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTK 957
              PE ++  D +   L +SP                 ++++ +  D  V  + P+     
Sbjct: 880  PAPEAEI--DLR---LQTSPT--------------SSNSATDTTVDKLVLGSGPE----- 915

Query: 958  ASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
                E+ EQ + G+YIT    P G + LKRVRFSRRRF+EK AE+WW++N+V V+Q+Y I
Sbjct: 916  ----EWVEQDQAGVYITLALAPGGGRDLKRVRFSRRRFSEKEAEQWWQDNRVRVHQQYSI 971

Query: 1018 EEYSNLNQN 1026
               SN ++N
Sbjct: 972  IRTSNTSKN 980


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/1061 (41%), Positives = 625/1061 (58%), Gaps = 82/1061 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EKQLRL+ V++II GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 53   DESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 110

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+  IS   RS       E R   + S  +SP +Y RR         
Sbjct: 111  CKDKDEAEVWFAGLKTLIS---RSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFS 167

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDS--FYSSESSSSQIQNLSNI 169
             N  + +D +E  ++RS  GSP  +  ++ FSD +SY++    F+ S+S      N+ ++
Sbjct: 168  SNDSVHKDGSENYRLRSPYGSPPKAGLDKAFSDIVSYAAPPRPFFPSDS------NVGSV 221

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKD-----ILKDVMIW 224
             + SS H +  N         ++R    ++ R+   +  S             L DV IW
Sbjct: 222  HSVSSGHSDNTN--------GNSRGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIW 273

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +GG      S +  ++D L+PK LE A  LDVQNIS G +HA LVTK+GEV+
Sbjct: 274  GEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVY 333

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGE   GRLGH V+ DV  PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG+    
Sbjct: 334  SWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFN 393

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
              L G     SHW+P++L   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG
Sbjct: 394  FGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453

Query: 405  NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGR 463
            + Q++S P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGR
Sbjct: 454  DRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGR 513

Query: 464  LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
            LGH D E +L+PTCV  LV+ +F Q +CG   TV LT  G VYTMGS+V+GQLGNP+A  
Sbjct: 514  LGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADG 573

Query: 524  RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
                 VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VE
Sbjct: 574  MVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVE 633

Query: 584  ALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSA 643
            AL+D+QV SVVCG + TAAIC+HK +S  DQS CS CR+PF  RRK+HNCYNC L FC +
Sbjct: 634  ALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHS 693

Query: 644  CSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEV 703
            CS+KK + ASL PN  KP RVCD+CY  L K   + R    +  +   L     S+++++
Sbjct: 694  CSSKKSLKASLAPNPNKPYRVCDSCYGKLNKGPETDRYSSAKRGAI--LQGFNDSINDDL 751

Query: 704  KEEKGALTPSR---GQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFKT 758
             E +  +  SR    +SF +  SR  ++       S+  S + +G   W  ++    F +
Sbjct: 752  -ETRSNVQLSRLSSMESFKNMDSRYSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGS 810

Query: 759  HCHEKSVEPTPIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESN 806
                K      +P +++++   SP+              +LG    P    V        
Sbjct: 811  ---SKKFFSASVPGSRIASRATSPVSRRTSPPRSTTPTPTLGGLTSP--RVVVDGARPIK 865

Query: 807  KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALA 866
              L++EV  LR Q  NL ++  +   +++   ++++EA S+A EE  KCKAAKE+IK+L 
Sbjct: 866  DNLSQEVVHLRSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKCKAAKEVIKSLT 925

Query: 867  VRLHTLSEKI-SAAKEAKEGVDAN-LPPKLDTDKHPEVKL-------PKDR-KVDSLCSS 916
             +L  ++EK+   A      V  N LPP        ++ +       P++  +  S  S+
Sbjct: 926  AQLKGMAEKLPEGAGAGAGAVKYNRLPPLSGVPVQNDISMATENLGSPRNSGEPYSNGSN 985

Query: 917  PIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
             +  SN   SV  R   H      +E  K    +P       S  E+ EQ EPG+YIT T
Sbjct: 986  GLTVSNGPSSV--RNKTH------LEVGKNGTRQPDSDSKPES--EWVEQDEPGVYITLT 1035

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             LP G + LKRVRFSR+RF+E  AE+WW+EN+  VY+ Y +
Sbjct: 1036 ALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYELYNV 1076


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/1102 (38%), Positives = 616/1102 (55%), Gaps = 138/1102 (12%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW +   E+ L+L+SV++II GQRT  FQ   +P++   SFS+IY+NG+RSLDLI
Sbjct: 47   DESSLIWITSSGERNLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYSNGKRSLDLI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGL-LEDA 120
            C+DKV+AE W  GL+A I+S +  R                   S I    + GL L D+
Sbjct: 107  CRDKVEAEVWIAGLKALIASGQGGR-------------------SKIDGWSDGGLILNDS 147

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
             +L+       +PS+SL+    S G+  S D   +  ++S +     N I+  S      
Sbjct: 148  RDLTS-----NNPSVSLAST--SRGIC-SPDISVTLPNTSPKSFRSDNTISERSHAPPDP 199

Query: 181  NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
              M+ + + +D       S    +    +P  +  D L DV IWGE V   ++    D +
Sbjct: 200  TNMQVKGSASDVFRVSVSSAPSTSSHGSAP--DDCDALGDVYIWGE-VTCENVKVGADKN 256

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
            V+    + D LLP+ LES+V+LDV +I+ G +HA+LVT++GEVF WGE   G LGH V  
Sbjct: 257  VNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGK 316

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            +V  P+LVE L+   V  V+CGEF +CA+T +GE+YTWG   H A L+G     SHW+P+
Sbjct: 317  NVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPK 376

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            ++   L+G++++ VACG WHTA+V+++GQLFT+GDGTFGVLGHG+ QNVS P+EVESL G
Sbjct: 377  RIAGPLEGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLG 436

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            L+  +VACG WHTAA+V+++     ++   GKLFTWGD DK RLGH D E +L PTCV  
Sbjct: 437  LRTIAVACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAA 496

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            L+D +F + +CG  LT GLT  G+V+TMGS V+GQLGNP++  +   +V  K+  E ++ 
Sbjct: 497  LIDSNFHKIACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEE 556

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            I+ G+YHVAVLTS   VYTWGK ANG+LG GD ++R+TP  VEAL+DR V+ + CGS+ +
Sbjct: 557  IACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYS 616

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
            AAICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +CS++K + A+  PN GK
Sbjct: 617  AAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNPGK 676

Query: 661  PSRVCDTCYNHLQKITHSG-----------------RLLKQENQSPRNLLNLQGSLSEEV 703
            P RVCD+CY  L K+  +                  RL K + +  + +++    L +++
Sbjct: 677  PYRVCDSCYAKLNKVAEASNSNRRNALPRLSGENKDRLDKSDLRLSKAVIHSNMDLIKQL 736

Query: 704  KEEKGALTPSRGQSFTSKQSRNVERKPGECLESASS-LSSGLQRWGQVSCPIRFKTHCHE 762
             + K A    +G +F+         +P   L+     LSS L     V  P+   +    
Sbjct: 737  -DSKAAKQGKKGDTFSLVH----PSQPPSLLQLKDVVLSSALDLRRTVPRPVVAPSGVSS 791

Query: 763  KSVEP-----------TPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNE 811
            +SV P           TPIP T                + +  + ++   L ++N++LN+
Sbjct: 792  RSVSPFSRRPSPPRSATPIPTT----------------SGLAFSKSISDSLKKTNELLNQ 835

Query: 812  EVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHT 871
            EVQ+L  Q  +L ++C++   ++Q   +  +EA +LA EE+ KCKAAKE+IK+L  +L  
Sbjct: 836  EVQKLHAQVESLRQRCELQELELQRSAKNTQEAMALAAEESAKCKAAKEVIKSLTAQLKD 895

Query: 872  LSEKISAAKEAKEGV-DANLPPKLDTD--KHPEVKLPKDRKVDSLCSSPIVFSNKLKSV- 927
            L+EK+       E V  A LP  ++ +  +HP+    +  + +S+ +S +  S  L+S  
Sbjct: 896  LAEKLPPGVYDAENVRPAYLPNGIEPNGIRHPDSNGEQHSRAESISASSLA-SMGLESAL 954

Query: 928  -----------YG-------RELCHDN-------------------SSGSVEDSKVARTE 950
                       YG       R     N                   SSG+V D+   R  
Sbjct: 955  LNRTAGNSPGTYGTNPHQQIRSPVSSNGANNYPDVKLPNRGGAIQASSGNVSDTADGRDS 1014

Query: 951  PQ-QKGTKASKL--------------EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRF 995
                 G    KL              E+ EQYEPG+YIT   L  G + LKRVRFSRRRF
Sbjct: 1015 GNFHNGDSGLKLRSVAPAADSNQVEAEWIEQYEPGVYITLVALSDGTRDLKRVRFSRRRF 1074

Query: 996  TEKAAERWWEENQVVVYQKYGI 1017
             E  AE WW EN+  VY++Y +
Sbjct: 1075 GEHQAETWWSENRDKVYERYNV 1096


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1131

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/1099 (40%), Positives = 625/1099 (56%), Gaps = 119/1099 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVN---------------------------- 33
            DE  LIW+SG++EK LRL+ ++KII GQRT+N                            
Sbjct: 52   DESVLIWFSGKEEKHLRLSHISKIIPGQRTLNSIVNEQKLYVSLEVFPFSIRDEIGCLTL 111

Query: 34   -----------FQCQPQPDRKQQSFSIIYANGERSLDLICKDKVQAESWFLGLRAAISSC 82
                       FQ  P+P+++ QSFS+I  + +RSLD+ICKDK +AE WF GL+  IS C
Sbjct: 112  LTRPFFIIQSIFQRYPRPEKECQSFSLI--SHDRSLDVICKDKDEAEVWFAGLKTLISRC 169

Query: 83   --RRSRTFSCLREKRG--VQSCVSSPASYIRRKH--------NLGLLEDATELSQVRSLC 130
              R+ RT     E R   + S  +SP +Y RR          N  + +D ++  ++R+  
Sbjct: 170  HQRKWRT-----ESRSDLLSSGATSPRTYTRRSSPLSSPFSSNDSIHKDGSDNYRLRTPY 224

Query: 131  GSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIITPSSPHMETENFMKWELN 188
            GSP  +  E+ FSD + Y+     F+ S+S++  + ++S      S H +  N     + 
Sbjct: 225  GSPPKNGLEKAFSDVMLYAVPPRGFFPSDSNAGSVHSMS------SGHSDNTNGHPRGVP 278

Query: 189  YADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQV 248
                R   + +    +   G    +  D L DV IWGEG   G +GG      S +  ++
Sbjct: 279  MDAFRASYSSAVSSSSHGSGH---DDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAKM 335

Query: 249  DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
            D L+PK LE AV LDVQNIS G +HAALVTK+GE++ WGE   GRLGH V+ DVS PKL+
Sbjct: 336  DCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLI 395

Query: 309  ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            + LS +N++ V+CGE+ TCA+T SG++YTWG       L+G     SHW+P+ +   L+G
Sbjct: 396  DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            + VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+ +++S P+EVESL+GL+    AC
Sbjct: 456  IHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAAC 515

Query: 429  GPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            G WHTAA+V++M  +   SN   GK+FTWGD DKGRLGH D   KL+PTCV  LV+ +F 
Sbjct: 516  GVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFC 575

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
            Q +CG  LTV LT  G VYTMGSAV+GQLGN +A       VEGKL + FV+ IS G+YH
Sbjct: 576  QVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYH 635

Query: 548  VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
            VAVLTS   VYTWGK ANG+LG GD+ ++ TPT VEAL+D+QV  VVCG + TAAIC+HK
Sbjct: 636  VAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIHK 695

Query: 608  SISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDT 667
             +S  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK + ASL PN  KP RVCDT
Sbjct: 696  WVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVCDT 755

Query: 668  CYNHLQKITHSGRLLKQENQSPRNLLNLQG--SLSEEVKEEKGALTPSR---GQSFTSKQ 722
            CY+ L K      L    + S +    + G    +EE  E +     SR    +SF    
Sbjct: 756  CYSKLTK-----GLETDMHSSAKRAATVPGVSDANEEDLETRSNAQLSRLSSMESFKHLD 810

Query: 723  SRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-THCHEKSVEPTPIPKTQMSTH- 778
            SR  ++       S   S + +G   W  ++    F       K      +P +++ +  
Sbjct: 811  SRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRA 870

Query: 779  -SPLLRKI----------SLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQC 827
             SP+ R+           +LG    P    V  D   +N  L++EV  LR Q  +L ++ 
Sbjct: 871  TSPISRRASPPRSTTPTPTLGGLTSP--RVVPNDGKPTNDALSQEVLNLRSQVESLARKS 928

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI--SAAKEAKEG 885
            Q+   +++   ++++EA S+A EE  KCKAAKE+IK+L  +L  ++E++   AAK  K  
Sbjct: 929  QLLEVELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAERLPGGAAKNTK-- 986

Query: 886  VDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRE-LCHDNSSGSVEDS 944
                LPP       P + +P D       S     S+  + + G   L   N   S+ + 
Sbjct: 987  ----LPPL------PGIFIPSDIPSMPTESEGSPSSSGEQIINGHNGLLTSNGQSSIRN- 1035

Query: 945  KVARTEPQQKGTK------ASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEK 998
            K +  E  + G +          E+ EQ EPG+YIT T LP G + LKRVRFSR+RF+E 
Sbjct: 1036 KTSHPEVGKNGGRLPDAESCHDAEWVEQDEPGVYITLTALPGGARDLKRVRFSRKRFSET 1095

Query: 999  AAERWWEENQVVVYQKYGI 1017
             AE+WW++N+  VYQ+Y +
Sbjct: 1096 QAEQWWQQNRARVYQQYNV 1114


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/1060 (40%), Positives = 619/1060 (58%), Gaps = 70/1060 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   ERSLDLI
Sbjct: 54   DESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--DERSLDLI 111

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+A IS C + R +       G  S  +SP +Y RR          N
Sbjct: 112  CKDKDEAEVWFSGLKALISRCHQ-RKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSN 170

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
                ++ +   ++ S   SP  +  ++ FSD   Y+     F+   S++  + +LS+  +
Sbjct: 171  ESFQKEGSNHLRLHSPYESPPKNGVDKAFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGS 230

Query: 172  PS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             +   HM+      + ++ +      +                  D L DV +WGEG+  
Sbjct: 231  DTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHDD----------GDTLGDVFMWGEGIGE 280

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG      S  + ++D+LLPK LES ++LDVQNI+ G +HA LVTK+GE F WGE  
Sbjct: 281  GVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEES 340

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            +GRLGH V+ +V  PKL++ L+  N++ V+CGE+ +CA+T SG++YTWG  + G  ++G 
Sbjct: 341  EGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFG--ILGH 398

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGHG+ ++V 
Sbjct: 399  GNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVF 458

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P+EV+SL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DK RLGH D 
Sbjct: 459  IPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK 518

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGNP A  +  T V
Sbjct: 519  EPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRV 578

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            +GKL + FV+ I+ G+YHVAVLTS   VYTWGK +NG+LG GD+ +R +PT VE+L+D+Q
Sbjct: 579  DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQ 638

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CGS+ TAA+CLHK  S  DQS CS CR PF F+RK+HNCYNCGL FC +CS KK 
Sbjct: 639  VKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKS 698

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + A + PN  KP RVCD C+N L+K   +       + S R  +N QG  S+ +  ++  
Sbjct: 699  LKACMAPNPNKPYRVCDRCFNKLKKAMETDP-SSHSSLSRRESVN-QG--SDAIDRDEKL 754

Query: 710  LTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRFK-TH 759
             T S GQ              SR+ + K  E   S  S + SG    G ++    F  T 
Sbjct: 755  DTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTF 814

Query: 760  CHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF----------IPIASTVEKDLSESNKML 809
               K      +P +++++ +                      +     V  D   SN  L
Sbjct: 815  GSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDDTKRSNDNL 874

Query: 810  NEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
            ++EV  LR Q  NL ++ Q+   +++   ++++EA ++A EE+ +CKAAKE+IK+L  +L
Sbjct: 875  SQEVVMLRSQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEVIKSLTAQL 934

Query: 870  HTLSEK--ISAAKEAKEGVDANL--PPKLDTDKHPEVKLPKDRKV--DSLCSSPIVFSNK 923
              ++E+  + +A+  K     +    P         +  P  R+   DSL + P+ FSN 
Sbjct: 935  KDMAERLPVGSARTVKSPSLNSFGSSPDYAAPSSNTLNRPNSRETDSDSLTTVPM-FSNG 993

Query: 924  LKS------VYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTT 977
              +       Y ++  H   + +   ++   +EP+ +       E+ EQ EPG+YIT T 
Sbjct: 994  TSTPVFDSGSYRQQANHAAEAINRISTRSKESEPRNEN------EWVEQDEPGVYITLTA 1047

Query: 978  LPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            L  G + LKRVRFSR+RF+EK AE WW EN+  VY++Y +
Sbjct: 1048 LAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNV 1087


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/1060 (40%), Positives = 619/1060 (58%), Gaps = 70/1060 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   ERSLDLI
Sbjct: 88   DESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--DERSLDLI 145

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+A IS C + R +       G  S  +SP +Y RR          N
Sbjct: 146  CKDKDEAEVWFSGLKALISRCHQ-RKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSN 204

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
                ++ +   ++ S   SP  +  ++ FSD   Y+     F+   S++  + +LS+  +
Sbjct: 205  ESFQKEGSNHLRLHSPYESPPKNGVDKAFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGS 264

Query: 172  PS-SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             +   HM+      + ++ +      +                  D L DV +WGEG+  
Sbjct: 265  DTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHDD----------GDTLGDVFMWGEGIGE 314

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG      S  + ++D+LLPK LES ++LDVQNI+ G +HA LVTK+GE F WGE  
Sbjct: 315  GVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEES 374

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            +GRLGH V+ +V  PKL++ L+  N++ V+CGE+ +CA+T SG++YTWG  + G  ++G 
Sbjct: 375  EGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFG--ILGH 432

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGHG+ ++V 
Sbjct: 433  GNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVF 492

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P+EV+SL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DK RLGH D 
Sbjct: 493  IPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK 552

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGNP A  +  T V
Sbjct: 553  EPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRV 612

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            +GKL + FV+ I+ G+YHVAVLTS   VYTWGK +NG+LG GD+ +R +PT VE+L+D+Q
Sbjct: 613  DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQ 672

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CGS+ TAA+CLHK  S  DQS CS CR PF F+RK+HNCYNCGL FC +CS KK 
Sbjct: 673  VKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKS 732

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + A + PN  KP RVCD C+N L+K   +       + S R  +N QG  S+ +  ++  
Sbjct: 733  LKACMAPNPNKPYRVCDRCFNKLKKAMETDP-SSHSSLSRRESVN-QG--SDAIDRDEKL 788

Query: 710  LTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRFK-TH 759
             T S GQ              SR+ + K  E   S  S + SG    G ++    F  T 
Sbjct: 789  DTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTF 848

Query: 760  CHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF----------IPIASTVEKDLSESNKML 809
               K      +P +++++ +                      +     V  D   SN  L
Sbjct: 849  GSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDDTKRSNDNL 908

Query: 810  NEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
            ++EV  LR Q  NL ++ Q+   +++   ++++EA ++A EE+ +CKAAKE+IK+L  +L
Sbjct: 909  SQEVVMLRSQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEVIKSLTAQL 968

Query: 870  HTLSEK--ISAAKEAKEGVDANL--PPKLDTDKHPEVKLPKDRKV--DSLCSSPIVFSNK 923
              ++E+  + +A+  K     +    P         +  P  R+   DSL + P+ FSN 
Sbjct: 969  KDMAERLPVGSARTVKSPSLNSFGSSPDYAAPSSNTLNRPNSRETDSDSLTTVPM-FSNG 1027

Query: 924  LKS------VYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTT 977
              +       Y ++  H   + +   ++   +EP+ +       E+ EQ EPG+YIT T 
Sbjct: 1028 TSTPVFDSGSYRQQANHAAEAINRISTRSKESEPRNEN------EWVEQDEPGVYITLTA 1081

Query: 978  LPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            L  G + LKRVRFSR+RF+EK AE WW EN+  VY++Y +
Sbjct: 1082 LAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNV 1121


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
            distachyon]
          Length = 1092

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/1061 (41%), Positives = 616/1061 (58%), Gaps = 80/1061 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK LRL+ V++I+ GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 55   DESVLIWFSGKEEKHLRLSHVSRIMPGQRTAIFQRYPRPEKECQSFSLI--SQDRSLDII 112

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+  IS   + R +        + S  +SP  Y RR          N
Sbjct: 113  CKDKDEAEVWFAGLKTLISRSHQ-RKWRTESRSDTISSAATSPRIYTRRSSPLSSPFSSN 171

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
              L +D  E  + RS  GSP  +  ++ FSD + Y+    SF+ S+S++  + ++S    
Sbjct: 172  DSLHKDGNENYRFRSPYGSPQKNGLDKAFSDVVLYAVPPKSFFPSDSNARSVHSMS---- 227

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
              S H +  N     +     R         V+ +      +  D L DV+IWGEG   G
Sbjct: 228  --SGHSDNTNGHPRGIQMDPFR---ASYSSAVSSSSYGSGYDDGDALGDVLIWGEGTGEG 282

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
             +GG      S +  ++D L+PK LE AV LDVQNIS G KHAALV+K+GE++ WGE   
Sbjct: 283  ILGGGSSRIGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESG 342

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V+ DV+ PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG       L+G  
Sbjct: 343  GRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHG 402

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+KL   L+G+ VS ++CG +HT IV+++GQLFT+GDG+FGVLGHG+ +++S 
Sbjct: 403  NDISHWVPKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSV 462

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            PKEVESL+GL+    ACG WHTAA+V++M  +   SN   GK+FTWGD DKGRLGH D E
Sbjct: 463  PKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKE 522

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             +L+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQLGNP+A       VE
Sbjct: 523  SRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLPARVE 582

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            GKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG G++ ++ TPT VEAL+D+QV
Sbjct: 583  GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQV 642

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
             +VVCG++ TAAIC+HK IS  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK +
Sbjct: 643  RNVVCGTNFTAAICIHKWISGVDQSMCSGCRQPFNLRRKRHNCYNCALIFCHSCSSKKSL 702

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGAL 710
             ASL PN  KP RVCD+CY+ L K    G      + + R  + +QG  S+ V E+    
Sbjct: 703  KASLAPNPSKPYRVCDSCYSKLTK----GLETDMYSSAKRGAV-VQG-FSDTVDED--TE 754

Query: 711  TPSRGQ--------SFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-TH 759
            T S  Q        SF    SR  ++       S   S + +G   W  ++    F    
Sbjct: 755  TRSNAQLSRMSSIDSFKHMDSRYSKKNKKFEFNSTRVSPVPNGGSHWSGLNISRSFNPVF 814

Query: 760  CHEKSVEPTPIPKTQMSTH--SPLLRKI-------------SLGSNFIPIASTVEKDLSE 804
               K      +P +++ +   SP+ R+               L S  + +      + S+
Sbjct: 815  GSSKKFFSASVPGSRIISRATSPVSRRPSPTRSTTPTPTFGGLTSPRVVVNGAKPTNDSQ 874

Query: 805  SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKA 864
            + ++LN     LR Q  NL ++ Q+   +++   ++++EA ++A EE  KCKAAKE+IK 
Sbjct: 875  TQEILN-----LRSQVDNLTRKYQLLEAELERTTKQLKEAIAIAGEETAKCKAAKEVIKT 929

Query: 865  LAVRLHTLSEKI--SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSN 922
            L  +L  ++E +   AAK +K      +P   D              V     SP     
Sbjct: 930  LTAQLKGMAEGLPGGAAKSSKLPPLPAIPIPSDISA----------MVTECLGSPDSSEE 979

Query: 923  KLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKAS------KLEYAEQYEPGIYITFT 976
            ++    G      ++  S   +K + +E    G++        + E+ EQ EPG+YIT T
Sbjct: 980  QVHISNGPNGLLVSNGPSSTRNKASHSEMASNGSRTPDPESYHEAEWVEQDEPGVYITLT 1039

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             L  G + LKRVRFSR+RF+EK AE+WW+ N+  VYQKY +
Sbjct: 1040 ALHGGARDLKRVRFSRKRFSEKQAEQWWQGNRARVYQKYNV 1080


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/1029 (41%), Positives = 607/1029 (58%), Gaps = 68/1029 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EKQLRL+ V++II GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 98   DESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 155

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKH------- 112
            CKDK +AE WF GL+  I+   RS       E R   + S  +SP +Y RR         
Sbjct: 156  CKDKDEAEVWFAGLKTLIT---RSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFS 212

Query: 113  -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDS--FYSSESSSSQIQNLSNI 169
             N  + +D  E  ++RS  GSP     E+ FSD +SY++    F+ S+S++  + ++S  
Sbjct: 213  SNDSVHKDGGENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVS-- 270

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
                S   +  N     +     R   + +    +   G    +  D L DV IWGEG  
Sbjct: 271  ----SGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGH---DDGDALGDVFIWGEGTG 323

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +G   +  V  +  ++D L+PK LE AV LDVQNIS G +HA LVTK+GE++ WGE 
Sbjct: 324  EGILG-GGNSRVGNSGVKMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEE 382

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
              GRLGH V+ DV  PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG+    + L+G
Sbjct: 383  SGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLG 442

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS ++CG WHTAIV+++GQLFT+GDG+FGVLGHG+ Q++
Sbjct: 443  HGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL 502

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
            S P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GK+FTWGD DKGRLGH D
Sbjct: 503  SVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGD 562

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             + +L+PTCV  LV+ +F Q +CG  +TV LT  G VYTMGS V+GQLGNP+A       
Sbjct: 563  KDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVR 622

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VE+L+D+
Sbjct: 623  VEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDK 682

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV +VVCG + TAAIC+HK +S  DQS CS CR+PF  RRK+HNCYNC L FC ACS+KK
Sbjct: 683  QVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKK 742

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKG 708
             + ASL PN  KP RVCD+CY+ L K   + R    +  S   +     S+ EE++ +  
Sbjct: 743  SLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGS--VIQGFNDSVDEELETKSN 800

Query: 709  ALTP--SRGQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFKTHCHEKS 764
            A     S  +SF    SR  ++       S+  S + +G   W  ++    F +    K 
Sbjct: 801  AQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKSFGS---SKK 857

Query: 765  VEPTPIPKTQMSTH--SPLLRKI----------SLGSNFIPIASTVEKDLSESNKMLNEE 812
                 +P +++ +   SP+ R+           +LG     + S    D  + N  +++E
Sbjct: 858  FFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGG----LTSPRVVDGVKPNDSISQE 913

Query: 813  VQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTL 872
            V  LR Q  NL ++ Q+    ++   ++++EA S+A EE  KCKAAKE+IK+L  +L  +
Sbjct: 914  VLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGM 973

Query: 873  SEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGREL 932
            +EK+       +  ++ LPP       P + +P D  V S        S +  S     L
Sbjct: 974  AEKLPEGAGLVK--NSRLPPL------PGISIPTDISVASESLGSPRSSGEPCSNGSNGL 1025

Query: 933  CHDNSSGSVEDSKVARTEPQQKGTKAS------KLEYAEQYEPGIYITFTTLPSGQKGLK 986
               N   SV + K++  E  + GT+        + E+ EQ EPG+YIT T LP G + LK
Sbjct: 1026 LVSNGPTSVRN-KLSHPEIPKNGTRLPDSDSKHESEWVEQDEPGVYITLTALPGGTRDLK 1084

Query: 987  RVRFSRRRF 995
            RVRF   R 
Sbjct: 1085 RVRFRNLRL 1093


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/1107 (38%), Positives = 608/1107 (54%), Gaps = 145/1107 (13%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW S   E+ L+L+SV++II GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 46   DESSLIWISSSGERNLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDKV+ E W  GL+A ISS +  R                   S I    + GL     
Sbjct: 106  CKDKVEVEVWIAGLKALISSGQGGR-------------------SKIDGWSDGGL----- 141

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPH-METE 180
             L   R L  +     S     D    SS   Y S         L+N    +SPH   +E
Sbjct: 142  HLDDSRDLTSNSPSESSVSASRD---LSSPDVYVS---------LAN----TSPHSFHSE 185

Query: 181  NFMKWELNYADTRCPKNESHRLVTPT-----------------YGSPLIERKDILKDVMI 223
            N + +E ++A    P N S+  V  +                 +GS   +  D L DV I
Sbjct: 186  NTLNFERSHA----PSNPSNMQVKGSSSDVFRVSVSSAPSTSSHGSA-PDDYDALGDVYI 240

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WGE +    +    + S S    + D LLP+ LES V+LDV  I+ G KHAALVT++GE+
Sbjct: 241  WGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGEL 300

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            F WGE   GRLGH V  +V  P+LVE ++   V  V+CGEF TCA+T +GE+YTWG   H
Sbjct: 301  FTWGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTH 360

Query: 344  GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
             A L+G     SHW+P+++   L+G++V+ V CG WHTA+++++GQLFT+GDGTFGVLGH
Sbjct: 361  NAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGH 420

Query: 404  GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
            G+ +NVS P+EVESL GL+  +VACG WHTAAI++++V +  ++   GKLFTWGD DK R
Sbjct: 421  GDRENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNR 480

Query: 464  LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
            LGH D + +L PTCV  L++ +F + +CG  LTVGLT  G+V+TMGS V+GQLGNP++  
Sbjct: 481  LGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDG 540

Query: 524  RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
            +   +VE K   E V+ I+ G+YHVAVLTS   V+TWGK ANG+LG GD ++R++PT VE
Sbjct: 541  KLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVE 600

Query: 584  ALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSA 643
            AL+DR V+ + CGS+ ++AICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +
Sbjct: 601  ALKDRHVKYIACGSNYSSAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHS 660

Query: 644  CSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLL-NLQGSLSEE 702
            CS++K + A+L PN GKP RVCD+C+  L K+   G      N + RN +  L G   + 
Sbjct: 661  CSSRKALRAALAPNPGKPYRVCDSCFVKLNKVAELG------NNNRRNAMPRLSGENKDR 714

Query: 703  VKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFK----- 757
            +++ +  LT +   S      + ++ K  +  + A + S  L R  Q    ++ K     
Sbjct: 715  LEKPELRLTKTAVPS-NMDLIKQLDSKAAKQGKKADTFS--LVRTSQPQSLLQLKDVVLS 771

Query: 758  THCHEKSVEPTPI---PKTQMSTHSPLLRKISLGSNFIPIAST--------VEKDLSESN 806
            T    K   P P+         + SP  R+ S   +  PI +T        +   L ++N
Sbjct: 772  TAIDLKRTAPRPVLTSSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSITDSLKKTN 831

Query: 807  KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALA 866
            ++LN+EV +LR Q   L ++C++   ++Q   +K +EA ++A EE+ K KAAKE+IK+L 
Sbjct: 832  ELLNQEVLKLRGQVETLRQRCELQELELQRSTKKAQEAMAVAAEESAKSKAAKEVIKSLT 891

Query: 867  VRLHTLSEKI-SAAKEAKEGVDANLPPKLDTD--KHPEVKLPKDRKVDSLCSSPIV---- 919
             +L  LSE++   A +A+    A LP  L+ +  ++P++      + +S+  S +     
Sbjct: 892  AQLKNLSERLPPGAYDAENIRPAYLPNGLEPNGIRYPDLNGEHHTRAESISGSSLASIGL 951

Query: 920  -------FSNKLKSVYGRELCHD-------------------NSSGSVEDSKVARTEPQQ 953
                       L   YG                         N SG ++ S    ++   
Sbjct: 952  ESSLMNRTDGTLPGSYGANHYQQNRGSVTSNGTDDYPNVKLPNGSGMIQPSSSTVSDTVD 1011

Query: 954  KGTKASKLE-----------------------YAEQYEPGIYITFTTLPSGQKGLKRVRF 990
             G  +   +                       + EQYEPG+YIT   L  G + LKRVRF
Sbjct: 1012 GGRDSGDFQDDESGLRSRNAIVPANSNQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRF 1071

Query: 991  SRRRFTEKAAERWWEENQVVVYQKYGI 1017
            SRRRF E  AE WW EN+  VY++Y +
Sbjct: 1072 SRRRFGEHQAETWWSENRDRVYKRYNV 1098


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1100

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/1061 (39%), Positives = 617/1061 (58%), Gaps = 72/1061 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   ERSLD+I
Sbjct: 49   DESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--DERSLDVI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH--------N 113
            CKDK +AE WF GL+A IS C + R +       G  S  +SP +Y RR          N
Sbjct: 107  CKDKDEAEVWFSGLKALISRCHQ-RKWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSN 165

Query: 114  LGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNI-I 170
                ++ +   ++ S   SP  +  ++ FSD   Y+     F+  +S++  + +LS+  +
Sbjct: 166  ESFQKEGSNHLRLHSPYESPPKNGIDKAFSDMSLYAVPPKGFFPPDSATMSVHSLSSGGL 225

Query: 171  TPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
                 HM+      + ++ +      +                  D L DV +WGEG+  
Sbjct: 226  DTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHDD----------GDTLGDVFMWGEGIGE 275

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG      S  + ++D+LLPK LES ++LDVQ I+ G +HA LVTK+GE F WGE  
Sbjct: 276  GVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEES 335

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            +GRLGH V+ +V  PKL++ LS  N++ V+CGE+ +CA+T SG++YTWG  + G  ++G 
Sbjct: 336  EGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFG--ILGH 393

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGHG+ ++V 
Sbjct: 394  GNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVF 453

Query: 411  QPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P+EV+SL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DK RLGH D 
Sbjct: 454  IPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK 513

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGNP A  +  T V
Sbjct: 514  EPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRV 573

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EGKL + FV+ I+ G+YHVAVLTS   VYTWGK +NG+LG GD+ +R +PT VE+L+D+Q
Sbjct: 574  EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQ 633

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V+S+ CGS+ TAA+CLHK  S  DQS CS CR PF F+RK+HNCYNCGL FC +C+ KK 
Sbjct: 634  VKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCTNKKS 693

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + A + PN  KP RVCD C+N L+K   +       + S R  +N QG  S+ +  ++  
Sbjct: 694  LKACMAPNPNKPYRVCDRCFNKLKKAMETDP-SSHSSLSRRESVN-QG--SDAIDRDEKL 749

Query: 710  LTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRFK-TH 759
             T S GQ              SR+ + K  E   S  S + SG    G ++    F  T 
Sbjct: 750  DTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTF 809

Query: 760  CHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF----------IPIASTVEKDLSESNKML 809
               K      +P +++ + +                      +     V  D   +N  L
Sbjct: 810  GSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLTTQKIVVDDTKRTNDNL 869

Query: 810  NEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
            ++EV  LR Q  NL ++ Q+   +++   ++++EA ++A EE+ +CKAAKE+IK+L  +L
Sbjct: 870  SQEVVMLRSQVENLTRKAQLQEVELERTTEQLKEALAIASEESARCKAAKEVIKSLTAQL 929

Query: 870  HTLSEK--ISAAKEAKEGVDANL--PPKLDTDKHPEVKLPKDRKVDSLCSSPI---VFSN 922
              ++E+  + +A+  K     +    P         +  P  R+ DS   SP+   +FSN
Sbjct: 930  KDMAERLPVGSARTIKSPSLNSFGSSPDYVAPSSNTLNCPNSRETDS--ESPMTVPMFSN 987

Query: 923  KLKS------VYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
               +       Y ++  H   + +   ++   +EP+ +       E+ EQ EPG+YIT T
Sbjct: 988  GTSTPVFDSASYRQQANHAADAINRISTRSKESEPRNEN------EWVEQDEPGVYITLT 1041

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             L  G + LKRVRFSR+RF+EK AE WW EN+  VY++Y +
Sbjct: 1042 ALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNV 1082


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/1087 (39%), Positives = 606/1087 (55%), Gaps = 108/1087 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW +   E+ L+L+SV++II GQRT  FQ   +P++   SFS+IY+NG+RSLDLI
Sbjct: 47   DESSLIWITSSGERNLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYSNGKRSLDLI 106

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGL-LEDA 120
            CKDK +AE W  GL+A ISS +  R                   S I    + GL L D+
Sbjct: 107  CKDKAEAEVWIAGLKALISSGQGGR-------------------SKIDGWSDGGLILNDS 147

Query: 121  TELSQVRSLCGSPSL--SLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHME 178
             +L+       S S    +S    S  L  +S   Y  +++ S+  + S    P   +M+
Sbjct: 148  RDLTSNSPSESSASTSRGISSPDISSTLPNTSPKSYRPDNTISERSHAS----PDPTNMQ 203

Query: 179  TENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVD 238
             +         + +  P   SH      Y        D L DV IWGE V   ++    D
Sbjct: 204  VKGSASDVFRVSVSSAPSTSSHGSAPDDY--------DALWDVYIWGE-VTCENVKVGAD 254

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
             +V+    + D LLP+ LES V+LDV +I+ G +HA+LVT++GEVF WGE   GRLGH V
Sbjct: 255  KNVNYFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV 314

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
              +V  P+LVE L    +  V+CGEF +CA+T +GE+YTWG   H A L+G   + SHW+
Sbjct: 315  GKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWI 374

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P+++   L+G++++ VACG WHTA+++++GQLFT+GDGTFGVLGHG+ QNVS P+EVESL
Sbjct: 375  PKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESL 434

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
             GL+  +VACG WHTAA+V+++     ++   GKLFTWGD DK RLGH D E +L PTCV
Sbjct: 435  LGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCV 494

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
            + L+D++F + +CG  LTVGLT  G+V+TMGS V+GQLG+  +  +   +V  K+  E +
Sbjct: 495  SALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESI 554

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + I+ G+YHVAVLTS   VYTWGK ANG+LG GD ++R+TP  VEAL+DR V+ + CGS+
Sbjct: 555  EEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSN 614

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             +AAICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +CS++K + A+  PN 
Sbjct: 615  YSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNP 674

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRG--- 715
            GKP RVCD+CY  L K+  +     + N  PR     +  L +       A+ PS     
Sbjct: 675  GKPYRVCDSCYAKLNKVAEACN-SNRRNALPRLSGENKDRLDKSDLRLSKAVIPSNMDLI 733

Query: 716  QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQV-SCPIRFKTHCHEKSVEPTPIPKTQ 774
            +   SK ++  ++     L   S   S LQ    V S  +  +       V P+ +    
Sbjct: 734  KQLDSKAAKQGKKGDTFSLIRPSQPPSLLQLKDVVLSTALDLRRTVPRPVVAPSGVSSRS 793

Query: 775  MSTHSPLLRKISLGSNFIPIAST--------VEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
            +   SP  R+ S   +  PI +T        +   L ++N++LN+EVQ+L  Q  +L ++
Sbjct: 794  V---SPFSRRSSPPRSATPIPTTSGLSFSKSISDSLKKTNELLNQEVQKLHAQVESLRQR 850

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGV 886
            C++   ++Q   +K +EA +LA EE+ K KAAKE+IK+L  +L  L+EK+       E +
Sbjct: 851  CELQELELQRSAKKTQEATALAAEESGKSKAAKEVIKSLTAQLKDLAEKLPPGVYDAENI 910

Query: 887  -DANLPPKLDTD--KHPEVKLPKDRKVDSLCSSPI------------------------- 918
              A LP  L+ +   +P+    +  + +S+  S +                         
Sbjct: 911  RPAYLPNGLEPNGIHNPDSNGEQHSRAESIIGSSLDSMGLESALLNKTAGNSPGTYGTNL 970

Query: 919  -------VFSNKLKSVYGRELCHDN-----SSGSVEDSKVAR----------------TE 950
                   V SN   +  G +L +       SSG+V D+   R                  
Sbjct: 971  HQKIRSPVSSNGTNNYPGVKLPNGGGVIQASSGTVSDTADGRDSGNFHDDESGLKSRNAA 1030

Query: 951  PQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVV 1010
            P   G +  + E+ EQYEPG+YIT   L  G + LKRVRFSRRRF E  AE WW EN+  
Sbjct: 1031 PTADGNQV-EAEWIEQYEPGVYITLVALHDGTRDLKRVRFSRRRFGEHQAETWWSENRDR 1089

Query: 1011 VYQKYGI 1017
            VY++Y +
Sbjct: 1090 VYERYNV 1096


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/1062 (39%), Positives = 613/1062 (57%), Gaps = 97/1062 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG +EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY+  ERSLD+I
Sbjct: 53   DETVLIWFSGNEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYS--ERSLDVI 110

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNL----- 114
            CKDK +AE WF GL+A IS C  R  RT S      G  S  +SP +Y RR   L     
Sbjct: 111  CKDKDEAEVWFTGLKALISHCHQRNRRTES---RSDGTPSEANSPRTYTRRSSPLHSPFS 167

Query: 115  ---GLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNI 169
                L +D +   ++ S   SP  +  ++ FSD   Y+     FY S+S++  +      
Sbjct: 168  SNDSLQKDGSNHLRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISV------ 221

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
                  H    + M   +        +      V+ +      +  D L DV IWGEG+ 
Sbjct: 222  ------HSGGSDSMHGHMRGMGIDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIG 275

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +GG      S    ++D+LLPK LES ++LDVQNI+ G +HA LVTK+GE F WGE 
Sbjct: 276  EGVLGGGNRRVGSSFDMKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEE 335

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
             +GRLGH V+ ++  PKL++ L+  N++ V+CGEF +CA+T SG++YTWG  + G  ++G
Sbjct: 336  SEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFG--VLG 393

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGHG+ ++V
Sbjct: 394  HGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSV 453

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
              P+EV+SL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DKGRLGH +
Sbjct: 454  FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN 513

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGN  A  +    
Sbjct: 514  KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNR 573

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ I+ G+YHVAVLTS   VYTWGK +NG+LG GD  +R +PT VE+L+D+
Sbjct: 574  VEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK 633

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV+S+ CG++ TAA+C+H+  S  DQS CS CR PF F+RK+HNCYNCGL FC +C++KK
Sbjct: 634  QVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKK 693

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL---SEEVKE 705
             + A + PN  KP RVCD C+N L+K         + + S  + L+ +GS+   S+ + +
Sbjct: 694  SLKACMAPNPNKPYRVCDKCFNKLKKTM-------ETDPSSHSSLSRRGSINQGSDPIDK 746

Query: 706  EKGALTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRF 756
            +    + S GQ        S     SR  + K  E   S  S + SG  + G ++    F
Sbjct: 747  DDKFDSRSDGQLARFSLMESMRQVDSRYKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSF 806

Query: 757  K-THCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF----------IPIASTVEKDLSES 805
                   K      +P +++ + +                      +     V  D   +
Sbjct: 807  NPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRT 866

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
            N  L++EV +LR Q  +L ++ Q+   +++   ++++EA ++A EE  +CKAAKE+IK+L
Sbjct: 867  NDNLSQEVVKLRSQVESLTRKAQLQEVELERTAKQLKEALAIANEETTRCKAAKEVIKSL 926

Query: 866  AVRLHTLSEK--ISAAKEAKEGVDANLPPKLDT--------DKHPEVKLPKDRKVDSLCS 915
              +L  ++E+  + +A+  K       PP L++        D    +  P  ++ +    
Sbjct: 927  TAQLKDMAERLPVGSARTVKS------PPSLNSFGSSPGRIDPFNILNQPNSQESEPNGI 980

Query: 916  SPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITF 975
            S  +FSN   +          + G+ E +  A  E           E+ EQ EPG+YIT 
Sbjct: 981  STPMFSNGTMTP---------AFGNGEATNEAHNEK----------EWVEQDEPGVYITL 1021

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            T L  G + LKRVRFSR+RF+EK AE+WW +N+  VY++Y +
Sbjct: 1022 TALAGGARDLKRVRFSRKRFSEKQAEQWWADNRGRVYEQYNV 1063


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
            finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
            finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/1057 (39%), Positives = 613/1057 (57%), Gaps = 87/1057 (8%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG +EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY+  ERSLD+I
Sbjct: 53   DETVLIWFSGNEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYS--ERSLDVI 110

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNL----- 114
            CKDK +AE WF GL+A IS C  R  RT S      G  S  +SP +Y RR   L     
Sbjct: 111  CKDKDEAEVWFTGLKALISHCHQRNRRTES---RSDGTPSEANSPRTYTRRSSPLHSPFS 167

Query: 115  ---GLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNI 169
                L +D +   ++ S   SP  +  ++ FSD   Y+     FY S+S++  +      
Sbjct: 168  SNDSLQKDGSNHLRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISV------ 221

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
                  H    + M   +        +      V+ +      +  D L DV IWGEG+ 
Sbjct: 222  ------HSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIG 275

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +GG      S    ++D+LLPK LES ++LDVQNI+ G +HA LVTK+GE F WGE 
Sbjct: 276  EGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEE 335

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
             +GRLGH V+ ++  PKL++ L+  N++ V+CGEF +CA+T SG++YTWG  + G  ++G
Sbjct: 336  SEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFG--VLG 393

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGHG+ ++V
Sbjct: 394  HGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSV 453

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
              P+EV+SL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DKGRLGH +
Sbjct: 454  FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN 513

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGN  A  ++   
Sbjct: 514  KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNR 573

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ I+ G+YHVAVLTS   VYTWGK +NG+LG GD  +R +PT VE+L+D+
Sbjct: 574  VEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK 633

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV+S+ CG++ TAA+C+H+  S  DQS CS CR PF F+RK+HNCYNCGL FC +C++KK
Sbjct: 634  QVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKK 693

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL---SEEVKE 705
             + A + PN  KP RVCD C+N L+K         + + S  + L+ +GS+   S+ + +
Sbjct: 694  SLKACMAPNPNKPYRVCDKCFNKLKKTM-------ETDPSSHSSLSRRGSINQGSDPIDK 746

Query: 706  EKGALTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRF 756
            +    + S GQ        S     SR+ + K  E   S  S + SG  + G ++    F
Sbjct: 747  DDKFDSRSDGQLARFSLMESMRQVDSRHKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSF 806

Query: 757  K-THCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF----------IPIASTVEKDLSES 805
                   K      +P +++ + +                      +     V  D   +
Sbjct: 807  NPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRT 866

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
            N  L++EV +LR Q  +L ++ Q+   +++   ++++EA ++  EE  +CKAAKE+IK+L
Sbjct: 867  NDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIKSL 926

Query: 866  AVRLHTLSEK--ISAAKEAKEGVDANLPPKLDT-DKHPEVKLPKD--RKVDSLCSSPIVF 920
              +L  ++E+  + +A+  K       PP L++    P    P +   + +S  S P   
Sbjct: 927  TAQLKDMAERLPVGSARTVKS------PPSLNSFGSSPGRIDPFNILNQANSQESEP--- 977

Query: 921  SNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPS 980
             N + +          + G+ E +  AR E           E+ EQ EPG+YIT T L  
Sbjct: 978  -NGITTPMFSNGTMTPAFGNGEATNEARNEK----------EWVEQDEPGVYITLTALAG 1026

Query: 981  GQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            G + LKRVRFSR+RF+E  AE+WW +N+  VY++Y +
Sbjct: 1027 GARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNV 1063


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
            protein [Zea mays]
          Length = 1056

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/1059 (39%), Positives = 593/1059 (55%), Gaps = 96/1059 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+W S  K+K L+L SV++I+ GQRT+ FQ    P++   SFS+IY +G+RSLDLI
Sbjct: 39   DESTLVWVSNNKDKSLKLASVSRILSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLI 98

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CK+KV+AE+WF GL A I            R + G Q                       
Sbjct: 99   CKNKVEAEAWFTGLSALI-----------CRGQHGSQ---------------------VQ 126

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
             +  +R + G P     E   S   +++SDSF +  SS +  ++ S+     S   +  +
Sbjct: 127  HIDGIR-IAGLPFDGARESSLSGSSTFTSDSFENKLSSVNSSKDRSSGEYTYSERTDVSD 185

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                 ++ +D R   + +    +   G    E  +   D+ +WGE +         D S 
Sbjct: 186  MQVKSVSSSDIRISVSSALSTSSHGSGG---EDSESFGDIYVWGEVICDTISRSGSDRSA 242

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
                T  D L+PK LES VMLDV  ++ G KHAALVT++ EVF WGE   GRLGH +  +
Sbjct: 243  YSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTN 302

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            V  P+LVE LS  NV+ ++CGEF TCA+T +G++YTWG   H A L+G   + SHW+P++
Sbjct: 303  VFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKR 362

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +   LDG+ VS V+CG WHTA++++SGQL+T+GDGTFGVLGHGN  + S PKEVESL+GL
Sbjct: 363  VSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGL 422

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +  SV+CG WHTAA+V++++   +SNA  GKLFTWGD DK RLGH D   KL PTCV  L
Sbjct: 423  RTISVSCGVWHTAAVVEVIIS--QSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSL 480

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            +D++F +A+CG  LT+GLT  G ++T+GS V+GQLGNP    R   +VE +L    V  +
Sbjct: 481  IDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQLGGGGVVEV 540

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            + GSYHVAVLT+ G VYTWGK  NG+LG GD  +R+ PT VEAL+DR V+ V CGSS TA
Sbjct: 541  ACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTA 600

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
            AIC HK +S  +QS CS CR PFGF RK+HNCYNCGL  C +CS+KK + A+L+PN GKP
Sbjct: 601  AICQHKWVSGMEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKP 660

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR-GQSFTS 720
             RVCD+CY  L K+  SG +    N  PR        L  + K E+     +R  QS +S
Sbjct: 661  YRVCDSCYVKLSKVLDSG-VSYSRNTIPR--------LPGDTKAERIDTKATRVAQSNSS 711

Query: 721  KQSRNVERKPGECL---ESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMST 777
               RN++ K  +     E +S + + LQ       P          S      P    ST
Sbjct: 712  DMIRNLDVKAAKQTKKSEYSSQVPATLQ---LKDIPFISAPDLQNLSTVANQYPYDPRST 768

Query: 778  HSPLLRKISLGSNF-IPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQE 836
              P LR   L  N+   ++S   + L ++N++L +EVQ+L+ +  +L ++ +  + ++Q+
Sbjct: 769  L-PSLRMPYL--NYSSSMSSESSESLKDANELLKQEVQKLQAEVNSLRQEREQQDAELQK 825

Query: 837  CQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI-SAAKEAKEG--VDANLPPK 893
               K  EA +LA EEA K K AK++I +L  +L  +SE++   A + K    V  +L P+
Sbjct: 826  ADAKAREAMNLATEEASKLKTAKDVINSLTAQLKEMSERLPPGACDVKNNGRVMGDLAPE 885

Query: 894  LDTDKHPE---------VKLPKDRKVDSLCSSPIVFSNKLKSVYG-RELCHD-----NSS 938
            +  +K             ++ +          P   S++ + V G RE         N  
Sbjct: 886  MGREKQMRYGDRFSGLPAQVYQTSNYSETAMVPPQGSSRSEHVDGVREFFSPVQQMANGG 945

Query: 939  GSVEDSKVARTEPQQK-------------GTKASK-------LEYAEQYEPGIYITFTTL 978
            GS       R++   +              T++S         E+ EQYEPG+Y+T  +L
Sbjct: 946  GSTTIGYRYRSDDHDRRETDRFQINLQSLNTRSSNSPSNQVDAEWIEQYEPGVYLTLVSL 1005

Query: 979  PSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
              G K LKRVRFSRRRF E  AE WW++N   VY KY +
Sbjct: 1006 RDGTKELKRVRFSRRRFGEHQAESWWKDNCEKVYDKYNV 1044


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/1050 (39%), Positives = 610/1050 (58%), Gaps = 69/1050 (6%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW S   EK+L+L +V+KI+ GQRT  FQ   +PD+   SFS+IY+N +R+LDLI
Sbjct: 41   DETSLIWISNGGEKRLKLATVSKIVPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLI 100

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDKV+AE W  GL+A IS           +  R      S     I    +L L     
Sbjct: 101  CKDKVEAEVWIAGLKALISG----------QAGRSKIDGWSDGGLSIADSRDLTLSSPTN 150

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
                  S+C S   ++++        Y+S +F  +  + + + +  + +   SP+M    
Sbjct: 151  S-----SVCASRDFNIADS------PYNSTNFPRTSRTENSVSSERSHVASDSPNMLVRG 199

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                    + +    + SH       GS   +  D L DV IWGE +         D ++
Sbjct: 200  TGSDAFRVSVSSVQSSSSH-------GSA-PDDCDALGDVYIWGEVLCENVTKFGADKNI 251

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
                ++ D L+PK LES V+LDV +I+ G KHAALV+++GEVF WGE   GRLGH +  D
Sbjct: 252  GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            V+ P+L+E L+  ++  V+CGEF TCA+T +GEIYTWG   H A L+G     SHW+P++
Sbjct: 312  VTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKR 371

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +   L+G++++ V+CG WHTA+++++GQLFT+GDGTFGVLGHG+ + V  P+EVESL GL
Sbjct: 372  ISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGL 431

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +  +VACG WH AAIV+++V    S+   GKLFTWGD DK RLGH D E +L PTCV+ L
Sbjct: 432  RTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSAL 491

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            +D  F + +CG  LTVGLT  GKVYTMGS V+GQLGNP A  +   +VE KL ++ V+ I
Sbjct: 492  IDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEI 551

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            + G+YHVAVLTS   V+TWGK ANG+LG GD ++R+ PT V+AL++R V+++ CGS+ TA
Sbjct: 552  ACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTA 611

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
            AICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +CS+KK + A+L PN GKP
Sbjct: 612  AICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSLKAALAPNPGKP 671

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS- 720
             RVCD+C++ L K++ +  +  ++N  PR    L G   + + + +  L  S   S    
Sbjct: 672  YRVCDSCHSKLSKVSEA-NIDSRKNVMPR----LSGENKDRLDKTEIRLAKSGIPSNIDL 726

Query: 721  -KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHS 779
             KQ  N   + G+  ++ S + +      Q+   +           +P   P +     S
Sbjct: 727  IKQLDNRAARQGKKADTFSLVRTSQTPLTQLKDALTNVADLRRGPPKPAVTPSSSRPV-S 785

Query: 780  PLLRKISLGSNFIPI--------ASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGN 831
            P  R+ S   +  PI        ++++ + L ++N++LN+EV RLR QA +L  +C++  
Sbjct: 786  PFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEVVRLRAQAESLRHRCEVQE 845

Query: 832  QKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI-SAAKEAKEGVDANL 890
             +VQ+  +K++EA SLA EE+ K +AAKE+IK+L  ++  ++  +   A EA+    ANL
Sbjct: 846  FEVQKSVKKVQEAMSLAAEESAKSEAAKEVIKSLTAQVKDIAALLPPGAYEAETTRTANL 905

Query: 891  PPKLD------TDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGR-------------E 931
                +      T+ + + +   D   D+  +SP+    +  +   R             E
Sbjct: 906  LNGFEQNGFHFTNANGQRQSRSDSMSDTSLASPLAMPARSMNGLWRNSQSPRNTDASMGE 965

Query: 932  LCHDN---SSGSVEDSKVARTEPQQKGTKAS-KLEYAEQYEPGIYITFTTLPSGQKGLKR 987
            L  +    S+G  ED + +R+        +  + E+ EQYEPG+YIT   L  G + LKR
Sbjct: 966  LLSEGVRISNGFSEDGRNSRSSAASASNASQVEAEWIEQYEPGVYITLLALGDGTRDLKR 1025

Query: 988  VRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            VRFSRRRF E+ AE WW EN+  VY+KY I
Sbjct: 1026 VRFSRRRFREQQAETWWSENRERVYEKYNI 1055


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/1102 (40%), Positives = 638/1102 (57%), Gaps = 126/1102 (11%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYSG +EK+L L++V+KI+ GQRT  F   P+P +  QSFS+IY+N ERSLDL 
Sbjct: 46   DENALIWYSGGEEKKLWLSTVSKILSGQRTPVFLRYPRPGKVCQSFSLIYSNEERSLDL- 104

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
              DK +A+ WF+GL+A+++  +       LR+            S +   +++G   +AT
Sbjct: 105  --DKDEADVWFVGLKASVAGAQ-------LRK------------SKLNNINHVGST-NAT 142

Query: 122  ELSQVRSLCGSPSLSLSER--CFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMET 179
              S  RS     SLSL+ R   F +    S D F +S    S +++    +  S   +ET
Sbjct: 143  NHSLKRS-----SLSLTSRFGSFDNLRRESGDFFKTSSFIGSPLRSEKGYLGGSLSTVET 197

Query: 180  ENFMKWELNY----------------------ADTR---CPKNESHRLVTPT-------- 206
            +N      NY                      A  R     +++++R+   +        
Sbjct: 198  KN------NYDAGSVGGSMHSGSSSMGSDSVSAQLRLVGAGQSDNYRISMSSAVSSSSQS 251

Query: 207  --YGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDV 264
              +G       + L DV +WGEGV  G +GG      +     +DA LPK LESA++LDV
Sbjct: 252  SQHGEDGSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDV 311

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
            Q ++ G KHAALVTK+GEVF WGE   GRLGH V+ DVS P+LVE L+    + V+CGE+
Sbjct: 312  QYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEY 371

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
              CA+T SG++YTWG   H   L+G     SHW+P+++   L+ VRV+ +ACG WHTA+V
Sbjct: 372  HGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVV 431

Query: 385  STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            +T+GQLFT+GDGTFGVLGH + Q+   P+EVESL+GL+    ACG WHTAA+V++MV   
Sbjct: 432  TTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSS 491

Query: 445  KSNAIG-GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             +++   GKLFTWGD DKGRLGH D E++L+PTCV  LVD +F + +CG  LTV LT  G
Sbjct: 492  SASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKG 551

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +V+TMGS++ GQLG+P+A  +   +VEG+L + +V+ I+ G++HVA +T    VYTWGK 
Sbjct: 552  EVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKG 611

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
            ANG+LG GD ++R TPT VEAL+++QV+S+ CG++ TAA+CLHK +S  DQ++CS CR P
Sbjct: 612  ANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQNACSGCRQP 671

Query: 624  FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITH----SG 679
            F F RK+HNCYNCGL FC ACS+KK + ASL PN GKP RVCD C   L+K +     +G
Sbjct: 672  FSFTRKRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRKASEGGVGAG 731

Query: 680  RLLKQENQSPRN--LLNLQGSLSEEVK----EEKGALTPSRGQSFTSKQSRNVERKPGEC 733
              L +     RN  +   +GS   E +    +   A  P     F       +  K G+ 
Sbjct: 732  ASLSKRGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPITLEFGKAGEGKLGMKRGKK 791

Query: 734  LESASSL-------SSGLQRWGQVSCPIRFKTHCHEKSVE-PTPIPKTQMSTH------S 779
             E++SS        +SG   WG VS P  F     + S+  P  I  + +S        S
Sbjct: 792  PENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPLAISSSVVSGRAVSRAVS 851

Query: 780  PL---------LRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIG 830
            PL               GS  + I  TV +DL ++N  L+ E  +LR    +L ++ Q  
Sbjct: 852  PLSRRTSPPRSTTPTPTGSG-LAIPKTVVEDLKKTNDTLSCENIQLRSHIESLSRELQRL 910

Query: 831  NQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI--SAAKEAKEGVDA 888
            + + Q   Q+++ A  +A EE+ K +AAKE+IK+L  +L  ++E++     K A+  V  
Sbjct: 911  DGEFQRSAQQLQNAVVMATEESAKSRAAKEVIKSLTTQLKEMAERLPQGGFKHARS-VSL 969

Query: 889  NLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDN-SSGSVEDSKVA 947
            +L     T+   +     +  +DSL  +P   + +L SV+  + C  N S+ +++D++  
Sbjct: 970  SLARLGVTNDAVD-----NAALDSL-GTPC--NERLGSVF--QQCRPNMSTLNIQDTEAN 1019

Query: 948  RTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEEN 1007
                 Q  T + + E+ EQ EPG+YIT T LP G K L+RVRFSR+RF+E+ AE+WW EN
Sbjct: 1020 GIANSQ--TLSPETEWVEQDEPGVYITLTALPEGGKDLRRVRFSRKRFSEREAEQWWAEN 1077

Query: 1008 QVVVYQKY----GIEEYSNLNQ 1025
            +V V+++Y    GI+  SNL++
Sbjct: 1078 RVRVHEQYQVRGGIDRRSNLSE 1099


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
            [Brachypodium distachyon]
          Length = 940

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/907 (43%), Positives = 530/907 (58%), Gaps = 68/907 (7%)

Query: 126  VRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETENFMKW 185
            V SL GSP L +  +     L  S       + + S +       TP   +    +F   
Sbjct: 77   VHSLYGSPRL-IQNKLSKSNLDCSEPFVSPRQRTWSDLDFYMEKFTPEMINRVKNSFQ-- 133

Query: 186  ELNYADT-------RCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVD 238
            +L  ADT       + PK      + P+ GS +    D LKD+ +WG      D+ G+V 
Sbjct: 134  DLTVADTIKEQGITQMPK------LKPSEGSHVAYGTDSLKDIFVWG------DVLGSVL 181

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
                 +K  V   LP+LL S  +LDVQN+S G KHAA+VTK+GEVF WG+   GRLGHKV
Sbjct: 182  DDRDTSKANVS--LPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKV 239

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            ++ V  PK++E L+  +V++++ G   TCAL  SGE++ WG   H   +  ++  RS W 
Sbjct: 240  SVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWY 299

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P KLF  L+GV V K+ACG+WHTAI+S+SGQLFTYGDGTFGVLGHG+  +V++PKEVESL
Sbjct: 300  PHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESL 359

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +GL+VK+VACGPWHTAAIV+I+    KSNA  GKLFTWGDAD+G+LGH D E KL+PTCV
Sbjct: 360  KGLRVKAVACGPWHTAAIVEIL-GTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCV 418

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              L D DF Q SC + LTV LT  G V+T+GS  HGQLG+ +  D SI  VEG LK EFV
Sbjct: 419  KALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFV 478

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + ISSGS HVAVLT  G V+TWGK   GQLGLG+  +R +PT VEAL D+QV+S+ CGS+
Sbjct: 479  REISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSN 538

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             T A+CLH+SIS  DQS CS+CR+ F F RKKHNCYNCG  FC++CS  K+  A+L P++
Sbjct: 539  FTVAVCLHRSISGKDQSVCSRCRLSFSFARKKHNCYNCGSMFCNSCSNNKVSRAALGPDR 598

Query: 659  GKPSRVCDTCYNHLQKI----THSGRL-LKQENQSPRNLLNLQGSLSEEVKE-----EKG 708
             K  RVCD C+  LQK     T S RL +++E   P  +      LS   KE     EK 
Sbjct: 599  NKRYRVCDACFTQLQKNEECGTVSSRLTIEKEEAFPTEIRAYTPKLSRIFKEANSIMEKM 658

Query: 709  ALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPT 768
            AL     Q       RN +    + L         +QRWGQV CP +F+  C   S+   
Sbjct: 659  ALAQGYHQ-------RNQDLAAPDQLR--------IQRWGQVECPSQFR--CARNSIPCC 701

Query: 769  PIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQ 828
               K Q           S+ +     AS+++ +L  + K+L EEV++L+     L +QC+
Sbjct: 702  STSKEQTVDE-------SVPAKSAQSASSLKAELDSTEKILLEEVKQLQAHVTTLTEQCR 754

Query: 829  IGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDA 888
              + KVQ C+QK+EE W + R+EA KCKAAKEIIK L  + + LS KI   K +      
Sbjct: 755  YRSLKVQLCKQKVEETWLIVRDEAAKCKAAKEIIKVLTNQRNILSRKILVGKHSYS--SE 812

Query: 889  NLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVAR 948
             +P  +   +  + +LP     D     P++   K + +      H N  G+   S +  
Sbjct: 813  TVPSHMTIGQPVKAELP-----DPPDKHPVI--GKFRRLSSIRDHHRNGRGTYNASNIYA 865

Query: 949  TEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
             E              EQ E G+Y+T  T PSG KG+KR+RFSR+ F EK A++WWE N+
Sbjct: 866  EEADATIPPIDSNGVVEQIERGVYVTIVTSPSGNKGIKRIRFSRKHFGEKEAQKWWEANE 925

Query: 1009 VVVYQKY 1015
              V++KY
Sbjct: 926  SRVFKKY 932



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 26/32 (81%)

Query: 2  DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVN 33
          DEK LIWYS ++EK L L+ V+ +++GQ+TV+
Sbjct: 47 DEKMLIWYSKEREKHLSLSYVSSVVLGQKTVH 78


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
            protein [Zea mays]
          Length = 1044

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/1063 (40%), Positives = 581/1063 (54%), Gaps = 123/1063 (11%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS  +EK L L+SV+ +++GQ+T                             I
Sbjct: 46   DETTLIWYSKGREKHLSLSSVSAVVLGQKT-----------------------------I 76

Query: 62   CKDKVQAESWFLGLRAAI-SSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
            C D+ QAE+W+LGLRA + + C    +    R  R + SC ++P+SYI+ K  L  +   
Sbjct: 77   CSDRDQAENWYLGLRALLPTPCNPCSSIES-RSSRQIDSCTNTPSSYIQLKSKLLSVHGT 135

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDS-FYSSESSSSQIQNLSNIITPSSPHMET 179
                QV S    P    +   F  G +  S+S FY+ + + S I      +T    + E 
Sbjct: 136  PRHIQVCSSQRKP--KKAHGTFFGGSADCSESLFYTRQRTFSDIGTYLENLTRKMSNPEI 193

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE------RKDILKDVMIWGEGVLGGDI 233
             +         D      E  + +T T      E      R D LKDV  WG+    G I
Sbjct: 194  HDL-------KDVMVGNQEKEQKITQTPKLKTFEGPRAACRLDSLKDVFFWGDAF--GSI 244

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
                D S           LP L++S  MLDVQ+I+ G  HAA++TK+GEV+ WG    GR
Sbjct: 245  LECGDTS---------KPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGR 295

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            +G++VN+ VS PK+V+ L+ ++V+ V+ G   TCA+T SGE+  WG   +   L  +  +
Sbjct: 296  IGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQL--DSYA 353

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
            R+ W P KLF  LDG+ V K+ACG WHTAI+++SGQL+TYGDGTFGVLGHG+ Q  ++PK
Sbjct: 354  RNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPK 413

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            EVESL+G +VK VACGPWHTAAIV+++ D  KSN+   KLFTWGDAD+G+LGH D + KL
Sbjct: 414  EVESLKGSRVKCVACGPWHTAAIVEVISD-FKSNSPRSKLFTWGDADRGKLGHADKKMKL 472

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
            +PTCV  L D+DF+Q SCG  LTV L+  G V+T GS++HGQLGNP A  ++++ VEG L
Sbjct: 473  IPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTVSAVEGLL 532

Query: 534  KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            K EFV+ ISSGS HVAV+T+ G V+TWGK   GQLGLGD   R TPT V+AL  R VES+
Sbjct: 533  KSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALEGRHVESL 592

Query: 594  VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINAS 653
             CG + TAA+CLHK IS  D S CS C+M FGF RKKHNCY+CG  FC++CS+ K+  A+
Sbjct: 593  SCGYNYTAAVCLHKVISRKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVAKAA 652

Query: 654  LTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQS----------PRNLLNLQGSLSEEV 703
            L P+K +  RVCD C++ L K+  SG++  + N S          P+ L  +   ++  V
Sbjct: 653  LAPDKSRRYRVCDGCFSQLLKVVDSGKVKSELNTSKGAEIIRSYTPK-LSRIFRDVNLPV 711

Query: 704  KEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRF---KTHC 760
            ++EK AL     Q       RN      E L +     S  QRWGQV CP +F   +   
Sbjct: 712  EKEKVALVQRSNQ-------RN------EVLYTPVQAKS--QRWGQVECPAQFLSAEDSS 756

Query: 761  HEKSVEPTPIPKTQMS--THSPLLRKISLGSNFIPIASTVEKDL-SESNKMLNEEVQRLR 817
            H +S+    +    +S   H P + K   G +         KDL S    +L EEV++LR
Sbjct: 757  HYQSISKNHMYSASVSERMHDPTVLKS--GRSLQQPNDDQRKDLNSIEETLLTEEVKQLR 814

Query: 818  DQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKIS 877
             Q   L +Q      +V+  +QK++E W + R EA KCKAAK+IIK L  +   LSEK+ 
Sbjct: 815  SQMTLLMEQYHQKALQVELYKQKLDETWLIVRNEAAKCKAAKDIIKVLTDQCKALSEKLL 874

Query: 878  AAK-----EAKEGVDANLPPKLDTDKHPEVKLPKDR--KVDSLCSSPIVFSNKLKSVYGR 930
              +     E K  +        D   HP  K    +  ++D+         N   S  G 
Sbjct: 875  VGQQYENLETKSNISQGQTFSADLQHHPSEKFATGKFGQLDNT-------KNHQTSSQGD 927

Query: 931  ELCHDNSSGSVE--------------DSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
            E    +SS  V+              DS    TE      + +     EQ E G+Y+TF 
Sbjct: 928  EEYTPSSSSDVQVEGLCGHLNGSRTFDSNGRITEGNSIVARVTSNGVIEQIERGVYVTFA 987

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEE 1019
              P G+K +KRVRFSR+ F EK A+ WWEEN+  VY KY  E+
Sbjct: 988  VSPCGKKDIKRVRFSRKHFGEKEAQHWWEENKGSVYAKYSTEK 1030


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222790
            [Cucumis sativus]
          Length = 982

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/1034 (40%), Positives = 584/1034 (56%), Gaps = 117/1034 (11%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYSG+ EKQL+L+ V+KII GQRT  FQ  PQP+++ QSFS++Y   +RSLDLI
Sbjct: 46   DESLLVWYSGKDEKQLKLSLVSKIIPGQRTAIFQQYPQPEKEYQSFSLLY--NDRSLDLI 103

Query: 62   CKDKVQAESWFLGLRAAIS--SCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
            CKDK +AE WF+GL+A I+  + R+ R      E R       SP + +RR        D
Sbjct: 104  CKDKDEAEVWFVGLKALITRGNHRKWRV-----ESRCESVSSDSPHARLRRNSPSITPCD 158

Query: 120  ATELSQVR-SLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHME 178
              +L  V     G   L    + FS+ LSY++ S  +S+  S        I+ PS     
Sbjct: 159  PGDLDGVSYENTGQNRLG---KAFSELLSYTAVSKGTSQPKS--------IVNPSLSTAL 207

Query: 179  TENFMKWELNYADTRCPKNESHRLVTPTYGSPLI-----ERKDILKDVMIWGEGVLGGDI 233
             +N        ++ R   +E  R+   +  S        E  D L DV IWGEG+  G +
Sbjct: 208  IDN--------SNGRISASEGFRVSLSSAVSSSSQGSCPEDFDALGDVYIWGEGIGDGLL 259

Query: 234  GGAVD--GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
            GG V+  GS     +++DALLPK LES V+LDV  I+ G +HA LVT++GE+F WGE   
Sbjct: 260  GGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESG 319

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V  DVS PK+++ LSG NV+ V+CGE+ TCA+T SG++YTWG   H   L+G  
Sbjct: 320  GRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHG 379

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
               SHW+P+K+   ++G+RVS ++CG WHTA+V+++GQLFT+GDG+FG LGHG+    + 
Sbjct: 380  SEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF 439

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG----KLFTWGDADKGRLGHV 467
            P+EVE+LRGL+   VACG WHTAA V+ + +   S         KL+TWGD DKGRLGH 
Sbjct: 440  PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHG 499

Query: 468  DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            D E +L+P CV  L++    Q +CG  LTV LT  G+VYTMGS  +GQLG+  A  +  T
Sbjct: 500  DNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPT 559

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
             VEG++   FV+ ++ GSYHVAVLTS   VYTWGK  NGQLG GD+  R TPT V+ L+D
Sbjct: 560  CVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKD 619

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            +QV++V CGS  T  IC+HK +S  D S CS C  PFGFRRK+HNCYNCGL FC ACS+K
Sbjct: 620  KQVKNVACGSKFTVVICIHKWVSSADHSVCSGCHNPFGFRRKRHNCYNCGLVFCKACSSK 679

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNL-LNLQGSLSEEVKEE 706
            K + ASL PN  KP RVCD C+N L+KI  S  + +       N+     G + +E    
Sbjct: 680  KSLKASLAPNXKKPYRVCDDCFNKLKKIMESSSVSQNARARTGNIHYKSNGVMDKETWVP 739

Query: 707  KGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVE 766
            K   T SR  SF +             + +A S+ S L                   S  
Sbjct: 740  KLQATLSRLSSFGA-------------INNAESMHSRL------------------ASRA 768

Query: 767  PTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
             +P+    + T SP           I  +    +D   +N  L +E+  LR Q + L  +
Sbjct: 769  TSPV----LGTSSP-----------IRSSEDFSEDSKRANDTLTQEIISLRAQVQELTCK 813

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGV 886
             +    ++++  +K+ E  ++A +EAEKCK+AKE+IK+LA +L  ++EK+       EG 
Sbjct: 814  SKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKEVIKSLAAQLKEMAEKM------PEGQ 867

Query: 887  DANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKV 946
             A +     T ++          ++ L +  +  S   +               +E + +
Sbjct: 868  TAIVNSSTVTGQN-------GSNLNQLSTESLSMSINSR---------------LESNGI 905

Query: 947  ARTEPQQKGTKA--SKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWW 1004
            ++ +    G KA   K E+  Q EPG+YIT +TLP G   LKRVRFSRR FTE  AE+WW
Sbjct: 906  SKGQTLSTGIKALNEKAEWVVQDEPGVYITLSTLPGGFNELKRVRFSRRHFTEAQAEKWW 965

Query: 1005 EENQVVVYQKYGIE 1018
             +    V +++ ++
Sbjct: 966  ADFGAKVCERHKVK 979


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/1059 (38%), Positives = 605/1059 (57%), Gaps = 98/1059 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS  +E+ L+L+SV++II GQRT  F+   +P++   SFS++Y NGERSLDLI
Sbjct: 46   DETTLIWYSHGEERNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLI 105

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGL-LE 118
            CKDKV+AE W  GL+A IS+   R  RT S + +             +I+     G+ L+
Sbjct: 106  CKDKVEAEVWLAGLQALISTGQHRNRRTRSDIPD-------FHDGGDFIQNGRPFGVNLD 158

Query: 119  DATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHME 178
             A+ +++ RS     S+ LS R         S   ++S  + S+  N+          + 
Sbjct: 159  FASSIARGRS-----SVDLSSR--------DSSLNWASSDAGSERTNM---------QLR 196

Query: 179  TENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGE----GVLGGDIG 234
            T     + ++ + T    ++         G   IE    L DV +WGE    GVL     
Sbjct: 197  TSGVDGFRISVSSTPSCSSQGS-------GPDDIES---LGDVYVWGEVWCDGVL----- 241

Query: 235  GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
               DGSVS    ++D L PK LES V+LDV  I+ G +H ALVT++GEVF WGE   GRL
Sbjct: 242  --PDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRL 299

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GH ++ D S P LVE L+  NV  V+CGE+ TCA++ SG+++TWG   H A L+G     
Sbjct: 300  GHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEV 359

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            SHW+P+++   L+G++V  VACG WH+A+ +++G+LFT+GDGTFGVLGHG+ ++V  P+E
Sbjct: 360  SHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPRE 419

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            V+ L GLK   VACG WHTAAI+++M  +  +N    KLFTWGD DK RLGH   E  LL
Sbjct: 420  VQILSGLKTIKVACGVWHTAAIIEVM-SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL 478

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV+ L+D++F Q +CG  +TV LT  G V+TMG   +GQLGNP +  R   +V+ KL 
Sbjct: 479  PTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLV 538

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ IS G+YHVAVLTS   V+TWG+ ANG+LG GD+++R +PTFVEAL+DR V+S+ 
Sbjct: 539  GEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSIS 598

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CGS+ TA+IC+HK +S  DQS CS CR  FGF RK+HNCYNCGL  C ACS+KK + A+L
Sbjct: 599  CGSNFTASICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAAL 658

Query: 655  TPNKGKPSRVCDTCYNHLQKI-THSGRLLKQENQSPRNLLNLQ-GSLSEEVKEEKGALTP 712
             P  GKP RVCD CY  L+        +  ++N  PR  ++    S   EV+  +  ++P
Sbjct: 659  APTPGKPHRVCDPCYAKLKAAEAGDASIFNRKNTVPRRSIDATIRSDRGEVRSARILMSP 718

Query: 713  SRGQSFTSKQSRNVER-KPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIP 771
                 F  K +R   R  P   ++S    S G      ++ P        + +++P    
Sbjct: 719  GPINYFEFKPARLGPRPDPSPMIQS----SQGPSLLKDIAFPSSLS--ALQNALKPVITA 772

Query: 772  KTQMSTH-----------SPLLRKISLGSNFIPIAS-TVEKDLSESNKMLNEEVQRLRDQ 819
              Q +             SP  R+ S   +  P+ S +V   L ++N++LN+EV +L++Q
Sbjct: 773  SPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVIDSLKKTNELLNQEVTKLQNQ 832

Query: 820  ARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAA 879
             R+L+++ +  + ++Q+ ++  +EA  LA EE+ KC  AKE++K++  +L  + +++   
Sbjct: 833  VRSLKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITTQLKEMEKQLPPE 892

Query: 880  -------KEAKEGVDANLPPKLDTDKHPEVKLPKDRKVD---SLCSSPIVFSNKLKSVYG 929
                   K  +  ++A L             LP D + D   +  ++P+   + + +   
Sbjct: 893  VYDSETFKSMQTQIEAFLNTSGTQAAEFSSSLPADLESDQKNAPVTNPLGVEDHVNAAGL 952

Query: 930  RELCHDNSSGSVEDSKVA-----RTEPQQKGTKASK--------LEYAEQYEPGIYITFT 976
             +L  +  S   + SK++        PQQ     S+         E  EQ+EPG+Y+TF 
Sbjct: 953  TDLTQNGESSVQDSSKLSISITRDAVPQQSTENGSRSAAKYEGEPESTEQFEPGVYVTFI 1012

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             L +G K  KRVRFS+R+F  + AE WW+EN+  + +KY
Sbjct: 1013 ALKNGTKIFKRVRFSKRKFGGQQAEEWWKENKERLLRKY 1051


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/1054 (40%), Positives = 578/1054 (54%), Gaps = 111/1054 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS  +EK L L+SV+ +++GQ+T                             I
Sbjct: 45   DETTLIWYSKGREKHLSLSSVSAVVLGQKT-----------------------------I 75

Query: 62   CKDKVQAESWFLGLRAAI-SSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDA 120
            C D+ QAE W+LGLRA + + C    +    R  R + SC ++P+SY++ K  L      
Sbjct: 76   CSDRDQAEYWYLGLRALLPTPCSPCSSIGS-RSSRQMDSCTNTPSSYVQLKSRLPSAHGT 134

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDS-FYSSESSSSQIQNLSNIITPSSPHMET 179
                QV S   +P     +  F  G +  S++ FY  + + S I      +T    + E 
Sbjct: 135  PRHIQVYSSHRNP----KKATFFGGSADCSEALFYPRQRTFSDIDTYLGKLTRKMSNPEI 190

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE-RKDILKDVMIWGEGVLGGDIGGAVD 238
                   +   +      ++ +L   T+  P    R D LKDV  WG+    G I    D
Sbjct: 191  HGLQDIMVGNREKEEKITQTPKL--KTFEGPRAACRLDSLKDVFFWGDAF--GSILDYDD 246

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
             S S         LP L++S  MLDVQ+I+ G  HAA++TK+GEV+ WG    G +G++V
Sbjct: 247  TSKS---------LPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQV 297

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            N+ VS PKLVE ++ ++V++V+ G    CA+T SGE++ WG   H   L  +  + + W 
Sbjct: 298  NIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQL--DCYANNLWF 355

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P KLF  LDG+ V K+ACG WHTAI+++SGQL+TYGDGTFGVLGHG+ Q  ++PKEVE L
Sbjct: 356  PHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYL 415

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +G +VK VACGPWHTAAIV+++ D  KSN+   KLFTWGDAD+G+LGH D + KL+PTCV
Sbjct: 416  KGSRVKCVACGPWHTAAIVEVLSD-FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCV 474

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              L D+DF+Q SCG  LTV L+  G V+T+GS++HGQLGNP A  R++  VEG LK EFV
Sbjct: 475  DSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFV 534

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + ISSGS HVAVLT+ G V+TWGK   GQLGLGD   R TPT V+AL  RQVES+ CG +
Sbjct: 535  RHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALEGRQVESISCGYN 594

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TAA+CLHK IS  D S CS C+M FGF RKKHNCY+CG  FC++CS+ K+  A+L P+K
Sbjct: 595  YTAAVCLHKIISRKDLSVCSGCKMAFGFTRKKHNCYHCGSMFCNSCSSNKVARAALAPDK 654

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
             +  RVCD C++ L ++  S +                  +  E+K  KGA      +S+
Sbjct: 655  IRRYRVCDGCFSQLLRVVDSAK------------------VKSELKISKGAEII---RSY 693

Query: 719  TSKQSR-------NVER-----KPGECLE-SASSLSSGLQRWGQVSCPIRFKTHCHEKSV 765
            T K SR        VE+     +P +  E  A+ + +  QRWGQV CP +F     E S 
Sbjct: 694  TPKLSRIFRDANLPVEKVALVQRPNQRNEVPATPVQAKSQRWGQVECPAQFLP--GEDSF 751

Query: 766  EPTPIPKTQMSTHSPLLRKISL-----GSNFIPIASTVEKDLSESNKMLNEEVQRLRDQA 820
                I K  M + S   R   L     G +         KDL+ +  +L EEV++LR Q 
Sbjct: 752  RYQSISKNHMCSASVSERMHDLTVLKSGRSLQQPNDDQRKDLNTTETLLTEEVKQLRSQV 811

Query: 821  RNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAK 880
              L +Q      +V+  +QK++E W + R+EA KCKAAK+IIK L  +   LSEK+   +
Sbjct: 812  TLLVEQYHQKALQVELYKQKLDETWLIVRDEAAKCKAAKDIIKVLTDQCKALSEKLLVGQ 871

Query: 881  -----EAKEGVDANLPPKLDTDKHPEVKLP----------KDRKVDSLCSSPIVFSNKLK 925
                 E K  +        D   +P  KL           K+ +  +        S+   
Sbjct: 872  QYEYLETKSNISQGQTLSADLQHYPCEKLARGKLGQLNNTKNHETSTEGDEEYTPSSSDV 931

Query: 926  SVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGL 985
             V G    H N S +  D     T+      + +     EQ E G+Y+TF   PSG+K +
Sbjct: 932  QVEGSR-SHLNGSRTF-DGNACVTQGNSLVARVTSNGVIEQIERGVYVTFAVSPSGKKDI 989

Query: 986  KRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEE 1019
            KRVRFSR+ F EK A+ WWEEN+  VY KY  E+
Sbjct: 990  KRVRFSRKHFGEKEAQHWWEENKGSVYAKYSTEK 1023


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/1057 (39%), Positives = 608/1057 (57%), Gaps = 94/1057 (8%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+SG +EK L+L+ V++II GQRT      P+P+++ QSFS+IY+  ERSLD+ 
Sbjct: 47   DETVLIWFSGNEEKHLKLSHVSRIISGQRTR----YPRPEKEYQSFSLIYS--ERSLDV- 99

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNL----- 114
              DK +AE WF GL+A IS C  R  RT S      G  S  +SP +Y RR   L     
Sbjct: 100  --DKDEAEVWFTGLKALISHCHQRNRRTES---RSDGTPSEANSPRTYTRRSSPLHSPFS 154

Query: 115  ---GLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNI 169
                L +D +   ++ S   SP  +  ++ FSD   Y+     FY S+S++  +      
Sbjct: 155  SNDSLQKDGSNHLRIHSPFESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISV------ 208

Query: 170  ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
                  H    + M   +        +      V+ +      +  D L DV IWGEG+ 
Sbjct: 209  ------HSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIG 262

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G +GG      S    ++D+LLPK LES ++LDVQNI+ G +HA LVTK+GE F WGE 
Sbjct: 263  EGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEE 322

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
             +GRLGH V+ ++  PKL++ L+  N++ V+CGEF +CA+T SG++YTWG  + G  ++G
Sbjct: 323  SEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFG--VLG 380

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SHW+P+++   L+G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGHG+ ++V
Sbjct: 381  HGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSV 440

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVD 468
              P+EV+SL+GL+    ACG WHTAA+V++MV     SN   GKLFTWGD DKGRLGH +
Sbjct: 441  FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN 500

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGS V+GQLGN  A  ++   
Sbjct: 501  KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNR 560

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ I+ G+YHVAVLTS   VYTWGK +NG+LG GD  +R +PT VE+L+D+
Sbjct: 561  VEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK 620

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV+S+ CG++ TAA+C+H+  S  DQS CS CR PF F+RK+HNCYNCGL FC +C++KK
Sbjct: 621  QVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKK 680

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL---SEEVKE 705
             + A + PN  KP RVCD C+N L+K         + + S  + L+ +GS+   S+ + +
Sbjct: 681  SLKACMAPNPNKPYRVCDKCFNKLKKTM-------ETDPSSHSSLSRRGSINQGSDPIDK 733

Query: 706  EKGALTPSRGQ--------SFTSKQSRNVERKPGECLES-ASSLSSGLQRWGQVSCPIRF 756
            +    + S GQ        S     SR+ + K  E   S  S + SG  + G ++    F
Sbjct: 734  DDKFDSRSDGQLARFSLMESMRQVDSRHKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSF 793

Query: 757  K-THCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNF----------IPIASTVEKDLSES 805
                   K      +P +++ + +                      +     V  D   +
Sbjct: 794  NPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRT 853

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
            N  L++EV +LR Q  +L ++ Q+   +++   ++++EA ++  EE  +CKAAKE+IK+L
Sbjct: 854  NDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIKSL 913

Query: 866  AVRLHTLSEK--ISAAKEAKEGVDANLPPKLDT-DKHPEVKLPKD--RKVDSLCSSPIVF 920
              +L  ++E+  + +A+  K       PP L++    P    P +   + +S  S P   
Sbjct: 914  TAQLKDMAERLPVGSARTVKS------PPSLNSFGSSPGRIDPFNILNQANSQESEP--- 964

Query: 921  SNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPS 980
             N + +          + G+ E +  AR E           E+ EQ EPG+YIT T L  
Sbjct: 965  -NGITTPMFSNGTMTPAFGNGEATNEARNEK----------EWVEQDEPGVYITLTALAG 1013

Query: 981  GQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            G + LKRVRFSR+RF+E  AE+WW +N+  VY++Y +
Sbjct: 1014 GARDLKRVRFSRKRFSEIQAEQWWADNRGRVYEQYNV 1050


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1054

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/1046 (39%), Positives = 603/1046 (57%), Gaps = 79/1046 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS +KEK LRL+SV+K+I GQRT  F+   +P++   SFS+IY NG+RSLDL+
Sbjct: 36   DETALIWYSHKKEKFLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLV 95

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNL-GLLEDA 120
            CKD+V+ E WF  L A ISSC R+ +    +++       S   SY R  H     L+ A
Sbjct: 96   CKDQVEVEVWFSALEALISSCHRNSSVDEHKDR----VSFSDDVSYYRDGHPYDSTLDIA 151

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
            + +S+        S + ++ C       SS SF  S++ S +    +N+I  S       
Sbjct: 152  SSISR--------SFNTADYCRG-----SSFSFRRSDAGSDR----ANMIRTSG------ 188

Query: 181  NFMKWELNYAD-TRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDG 239
                     AD TR   + +    +   G+  IE    L DV +WGE  +  D   + DG
Sbjct: 189  ---------ADSTRLSISSAPSSSSQGSGTDDIES---LGDVYVWGE--VWTDAAPS-DG 233

Query: 240  SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
              S + ++VD L+PK LES V+LDV  I  G++H AL T++GEVF WGE   GRLGH  +
Sbjct: 234  HTSSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTD 293

Query: 300  MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
             D+S PKLVE LS   V  +SCGEF TCA++ SG+++ WG  ++ A L+G     SHWLP
Sbjct: 294  TDISRPKLVESLSVTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLP 353

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            +++   L+G++V  VACG WH+A+++++G+L+T+GDG FG LGHGN ++ + PKEVE+L 
Sbjct: 354  KRVSGPLEGLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALN 413

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
            G +   VACG WH+AAIV+  V +   N +  KL+TWGD DK RLG  D E +L+PTC+ 
Sbjct: 414  GFRTVKVACGVWHSAAIVEASV-QTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQ 472

Query: 480  RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
             L++ +F Q  CG+ +TV L   G VYTMGS+ +GQLGNPK+  +   +V+ KL  E V+
Sbjct: 473  ALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVE 532

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
             IS G+ HVAVLTS   VYTWG  ANG+LG GD  +++TPT VEAL+DR V+S+ CGS+ 
Sbjct: 533  EISCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNF 592

Query: 600  TAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKG 659
            T  IC+H+ +S  DQS C+ CR  FGF RK+HNCYNCGL  C ACS++K++ A+L P  G
Sbjct: 593  TTCICIHRWVSGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPG 652

Query: 660  KPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR--GQS 717
            KP RVCD+C+  L+    S     + N + R   +       E++  +   TPS   G+ 
Sbjct: 653  KPHRVCDSCFLKLKNADTSSSNANRRNAATRR--STDSREKPEIRPPRLVATPSAEPGKY 710

Query: 718  FTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRF---KTHCHEKSVEPTP-IPKT 773
               K S++ + KP + +  AS  S+ LQ +  +    +F   +      ++  +P IP  
Sbjct: 711  MEVKASKS-DMKPADSIMKASQASALLQ-FKDLGFGAQFGGLQPMGMPPALAMSPAIPAF 768

Query: 774  QMSTHSPLLRKI-SLGSNFIPIASTVEKD-LSESNKMLNEEVQRLRDQARNLEKQCQIGN 831
             ++  SP  +K+ S  ++ IP +S V+ D L +SN +LN+EV +L+ Q  +L+++C+  +
Sbjct: 769  SLAPPSPYTKKMKSPPTSAIPQSSKVDVDHLQKSNDLLNQEVLKLQSQVEDLKQKCEAQH 828

Query: 832  QKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISA-AKEAKEGVDANL 890
            +++Q+  +K +   S+A EE+ K  AA E +K L   L  +++K+     ++ + +    
Sbjct: 829  EQLQKSDKKAKSVASMATEESSKRNAAVEFVKFLDNELKGIADKLPVDVADSLKALQMRT 888

Query: 891  PPKL-DTDKHP-EVKLPKDRKVDSLCSSPI----VFSNKLKSVYGRELCHDNSSGSVEDS 944
               L +   HP E+  P +R    L S       + ++K   V    +  D SS S    
Sbjct: 889  QSLLREQSGHPLELVNPMERDHLHLSSGGSGRYDLVTHKSGGVGYLTMSQDGSSASGSAM 948

Query: 945  KVARTEPQQKGTKAS---------------KLEYAEQYEPGIYITFTTLPSGQKGLKRVR 989
             +    P  +  + S               +++  EQ+EPG+Y+T   L  G K  KRVR
Sbjct: 949  SITSESPSHRFMENSSKAHGDFAPKQGTHGEVQLIEQFEPGVYVTLIQLKDGTKVFKRVR 1008

Query: 990  FSRRRFTEKAAERWWEENQVVVYQKY 1015
            FS+RRF E  AE WW ENQ  V++KY
Sbjct: 1009 FSKRRFAENQAEEWWRENQERVFKKY 1034


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/1063 (39%), Positives = 603/1063 (56%), Gaps = 112/1063 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW SG++EK L+L+ V++II GQRT                             I
Sbjct: 49   DESALIWISGKEEKHLKLSHVSRIIPGQRT-----------------------------I 79

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGL----- 116
            CKDK +AE WF GL+A IS  +  +     R   G+ S  +SP +Y  R   L       
Sbjct: 80   CKDKEEAEVWFTGLKALISHHQLWKKREETRND-GLLSEANSPRAYTLRSSPLSFAFGSD 138

Query: 117  ---LEDATELSQVRSLCGSPSLSLSERCFSDGL-SYSSDSFYSSESSSSQIQNLSNIITP 172
               ++D T+  ++R+   SP  +  E+  SD + +      +  ES+            P
Sbjct: 139  DSSMKDGTDPLRLRTPYDSPPKAGLEKALSDAVYTVPPKVLFPLESACG----------P 188

Query: 173  SSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGD 232
             S   ET   MK   N    R   + +    +   G    +  D L DV IWGEG   G 
Sbjct: 189  GSD--ETTGRMK-NTNTEAFRVSLSSAVSSSSQGSGR---DDNDALGDVYIWGEGTGEGI 242

Query: 233  IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
            +GG V  S   +  Q+D+ +PK LESAV+LDVQ I+ G +HAALVTK+GEVF WGE   G
Sbjct: 243  LGGGVHKSGGSD-IQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGG 301

Query: 293  RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
            RLGH V+ DVS PK V+ L   NV+ V+CGE+ +CA+T SG++Y WG N +   L+G   
Sbjct: 302  RLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGS 361

Query: 353  SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
              + W+PRKL   L+G+ VS V+CG WHTA+V+++GQLFT+GDGTFGVLGHG+  +VS P
Sbjct: 362  EATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTP 421

Query: 413  KEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
            +EVESL+GL+   VACG WHTAA+V++MV     SN   GKLFTWGD DKGRLGH D E 
Sbjct: 422  REVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 481

Query: 472  KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
            +L+PT V  LV+  F Q +CG  LTV LT  G+VYTMGS V+GQLGNP+A  +  T VEG
Sbjct: 482  RLVPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEG 541

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            KL + FV+ ++ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R  P+ VEAL+D+QV+
Sbjct: 542  KLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVK 601

Query: 592  SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN 651
             ++CG+S TAAICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+KK + 
Sbjct: 602  GIICGTSFTAAICLHKWVSGIDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLK 661

Query: 652  ASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKE--EKGA 709
            AS+ PN  KP RVCD C++ +++ T +       + S  + L  +GS ++ + E  EK  
Sbjct: 662  ASMAPNPNKPYRVCDYCFSKIRRSTGT-------DSSVHSTLRRRGSENQGLNEITEKSE 714

Query: 710  LTPSR-----GQSFTSKQSRNVE----RKPGECLESASSLSSGLQRWGQVSCPIRFKTHC 760
             + +R     G++F+ + S+ VE    R+  +    ++ +S       Q +     K+  
Sbjct: 715  NSNTRSHAKLGRNFSMESSKEVESISSRRNRKSSSISTQVSPSAYDVSQRNAFNNSKSFG 774

Query: 761  HEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIPIASTVEKDLSES--------NKMLN 810
              K      +P +++ +   SP  R+ S      P  +    +L +         N  L 
Sbjct: 775  SSKKFFSASVPGSRIVSRATSPTSRRSSPPRATTPTPALSVHELPKVAVDGTGRLNDSLR 834

Query: 811  EEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLH 870
            EEV +LR Q   L  + Q+   +++    +++EA ++A EE  KCKAAKE+IK+L  +L 
Sbjct: 835  EEVVKLRAQVEELTHKAQLQEVELERTTSQLKEAVAVAEEETAKCKAAKEVIKSLTAQLK 894

Query: 871  TLSEKISAAKEAKEGVDANLPPKLDTDKHP----------EVKLPKD-RKVDSLCSSPIV 919
             ++E++          + N P    +   P          +++ P+   + DS  S+ +V
Sbjct: 895  DVAERVPVGA----ARNNNSPSFYYSSNTPLRAVSPGVLEQLRGPRTCHEQDSNGSNSLV 950

Query: 920  FSNKLKSVYGRELCHDNSSGSVEDS-----KVARTEPQQKGTKASKLEYAEQYEPGIYIT 974
             SN + +    +  H +    +E +     + A+ EP          E+ EQ EPG+YIT
Sbjct: 951  VSN-VSAPTTNQTPHHSEVAHIEATLRNKNRTAKVEPTNGD------EWVEQDEPGVYIT 1003

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
              +LP G K LKRVRFSR+RF+EK AE+WW  N+  +YQ+Y +
Sbjct: 1004 LVSLPGGAKDLKRVRFSRKRFSEKQAEQWWASNRARLYQQYNV 1046


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1083

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/1058 (38%), Positives = 612/1058 (57%), Gaps = 80/1058 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW S   EK+L+L +V+KI+ GQRT  FQ   +PD+   SFS+IY+N +R+LDLI
Sbjct: 46   DETSLIWISNGGEKRLKLATVSKIVPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLI 105

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGL-LEDA 120
            CKDKV+AE W  GL+ A+ S +  R                   S I    + GL + D+
Sbjct: 106  CKDKVEAEVWIAGLK-ALISGQAGR-------------------SKIDGWSDGGLSIADS 145

Query: 121  TELS----QVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPH 176
             +L+       S+C S   +++E        Y+S +F  +  + + + +  + +   SP+
Sbjct: 146  RDLTLSSPTNSSVCASRDYNIAE------TPYNSTAFPRTSRTENSVSSERSHVASDSPN 199

Query: 177  METENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGA 236
            M              +   +     + + +      +  D L DV IWGE +        
Sbjct: 200  MLVRG--------PGSDVFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCDNVAKFG 251

Query: 237  VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
             + + +   ++ D L+PK LES V+LDV +I+ G +HAALV+++GEVF WGE   GRLGH
Sbjct: 252  AEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGH 311

Query: 297  KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             +  DV+ P+L+E L+  +V  V+CGEF TCA+T +GEIYTWG   H A L+G     SH
Sbjct: 312  GMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSH 371

Query: 357  WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            W+P+++   L+G++++ V+CG WHTA+++++GQLFT+GDGTFGVLGHG+ + V  P+EVE
Sbjct: 372  WIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVE 431

Query: 417  SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            SL GL+  +VACG WH AAIV+++V +  S+   GKLFTWGD DK RLGH D E +L PT
Sbjct: 432  SLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPT 491

Query: 477  CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            CV+ L+D  F + +CG  LTVGLT  GKVYTMGS V+GQLGNP A  +   +VE KL ++
Sbjct: 492  CVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLIKD 551

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
             V+ I+ G+YHVAVLTS   V+TWGK ANG+LG GD ++R+ P+ V+ L++R V+++ CG
Sbjct: 552  CVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACG 611

Query: 597  SSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTP 656
            S+ TAAICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +CS+KK + A+L P
Sbjct: 612  SNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSKKSLKAALAP 671

Query: 657  NKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSE-EVKEEKGALTPSRG 715
            N GKP RVCD+CY+ L K++ +     ++N  PR     +  L + E++  K  + PS  
Sbjct: 672  NPGKPYRVCDSCYSKLSKVSEAS-TDSRKNIMPRLSGENKDRLDKAEIRLAKSGI-PSNI 729

Query: 716  QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQM 775
                   SR   +  G+  ++ S + +      Q+   +           +P   P    
Sbjct: 730  DLIRQLDSRAARQ--GKKADTFSLVRTSQTPLTQLRDALTNVADLRRGPPKPAVTPSGAS 787

Query: 776  S-THSPLLRKISLGSNFIPI--------ASTVEKDLSESNKMLNEEVQRLRDQARNLEKQ 826
            S + SP  R+ S   +  PI        ++++ + L ++N++LN+EV +LR QA +L  +
Sbjct: 788  SRSVSPFSRRSSPPRSVTPIPLTAGLGFSTSIAESLKKTNELLNQEVVKLRAQAESLRHR 847

Query: 827  CQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI-SAAKEAKEG 885
            C++   +VQ+  +K++EA +LA EE+ K +AAKE+IK+L  ++  ++  +   A +A+  
Sbjct: 848  CEVQEFEVQKSVKKVKEAMNLAAEESAKSEAAKEVIKSLTAQVKDIAALLPPGAYKAETT 907

Query: 886  VDANLPPKLDT------DKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGR--------- 930
              ANL    +       + + + +   D   D+  +SP+    +  +   R         
Sbjct: 908  RTANLLNGFEQNGFHFGNANGQRQSRSDSISDTSLASPMALPARSMNGLWRNSQSPRNTD 967

Query: 931  ----ELCHDN---SSGSVEDSKVARTEPQQKGTKAS----KLEYAEQYEPGIYITFTTLP 979
                EL  +    S+G  ED    R       + ++    + E+ EQYEPG+YIT   L 
Sbjct: 968  ASMGELLSEGVRISNGFSEDGDNRRNSRSSAASASNASQVEAEWIEQYEPGVYITLLALG 1027

Query: 980  SGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             G + LKRVRFSRRRF E+ AE WW EN+  VY+KY I
Sbjct: 1028 DGTRDLKRVRFSRRRFREQQAEAWWSENRERVYEKYNI 1065


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/1102 (38%), Positives = 607/1102 (55%), Gaps = 157/1102 (14%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            D   LIW S   EK+L+L+SV++II GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 116  DGSSLIWISSGGEKKLKLSSVSRIIPGQRTAVFQRYLRPEKDYVSFSLIYNNGKRSLDLI 175

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGL-LEDA 120
            CKDKV+A+ W  GL+  ISS +  R                   S I    + GL L+D+
Sbjct: 176  CKDKVEADVWISGLKKLISSGQGGR-------------------SKIDGWSDGGLNLDDS 216

Query: 121  TELSQVRSL---------CGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIIT 171
             +L+                SP +S+S    S   SY  D+  +SE S ++ ++ +  I 
Sbjct: 217  KDLTSNSPSGSSASASLDISSPDISVSLPSTSPN-SYRPDNTLNSERSHARSESTNMQIK 275

Query: 172  PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
             S       + ++  ++ A             T ++GS   +  D L DV IWGE ++  
Sbjct: 276  GSG-----TDTVRVSVSSA-------------TSSHGSA-PDDYDALADVYIWGE-IICE 315

Query: 232  DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
            +I    D SV     + D LLP+ LES V+LDVQ+I+ G +HA+LVT++GEVF WGE   
Sbjct: 316  NIKVGADKSV-HFCPRADVLLPRPLESNVVLDVQHIACGVRHASLVTRQGEVFTWGEESG 374

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            GRLGH V  +V  P+LVE L+   V  V+CGEF +CA+T +GE+YTWG   H A L+G  
Sbjct: 375  GRLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMTGELYTWGDGTHNAGLLGHG 434

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
             + SHW+P+++   LDG++VS VACG WHTA+++++G+                 +NVS 
Sbjct: 435  SNASHWIPKRIGGPLDGLQVSFVACGPWHTALITSTGK-----------------ENVSY 477

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
            P+EV+SL GL+  +VACG WHTAA+V+++  +  ++   GKLFTWGD DK RLGH D E 
Sbjct: 478  PREVDSLLGLRTIAVACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKES 537

Query: 472  KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
            +L PTCV  ++D+DF + +CG  LTVGLT  G+V+TMGS V+GQLGNP++  +   +V  
Sbjct: 538  RLNPTCVPAIIDYDFKKIACGHSLTVGLTTTGRVFTMGSTVYGQLGNPQSDGKLPCLVGD 597

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            K+  E V+ IS G+YHVAVLTS   VYTWGK +NG+LG GD ++R+TPT VEAL+DR V+
Sbjct: 598  KIALESVEEISCGAYHVAVLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDRHVK 657

Query: 592  SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN 651
             + C S+ +AAICLHK +S  +QS CS CR  FGF RK+HNCYNCGL  C +CS+KK + 
Sbjct: 658  YIACASNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALR 717

Query: 652  ASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLL-NLQGSLSEEVKEEK--- 707
            A+L PN  K  RVCD+CY  L K+  +       N + RN L  L G   + + + +   
Sbjct: 718  AALAPNPDKHYRVCDSCYAKLSKVAEA------NNSNRRNALPRLSGENKDRLDKSELRV 771

Query: 708  -GALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSC----PIRFKTHCHE 762
              AL PS       KQ  N   K G+  ++ S     L R  Q        + F T    
Sbjct: 772  SKALIPSNMDLI--KQLDNKAAKQGKKSDTFS-----LARNSQTPLLQLKDVVFATAADL 824

Query: 763  KSVEPTP-IPKTQMSTH--SPLLRKISLGSNFIPIAS--------TVEKDLSESNKMLNE 811
            +   P P I  + +ST   SP  R+ S   +  PI +         +   L ++N++LN+
Sbjct: 825  RRTTPRPVIAPSGVSTRSASPFSRRSSPPRSATPIPTMSGLSFSKNIADSLKKTNELLNK 884

Query: 812  EVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHT 871
            EVQ+L  Q  +L+ +C+    +VQ   +K +EA +LA EE+ KCKAAK++IK+L  +L  
Sbjct: 885  EVQKLHAQVESLKNKCERQELEVQRSAKKTQEAIALATEESTKCKAAKQVIKSLTAQLKD 944

Query: 872  LSEKISA-AKEAKEGVDANLPPKLDTD--KHPEVKLPKDRKVDSLCSSPIV--------- 919
            L+EK+   A +A+    A LP  L+++   +P+    +D + +S+  S +          
Sbjct: 945  LAEKLPPEAYDAENIRPAYLPNGLESNGIHYPDTNGEQDLRAESISGSSLASIGLESSLF 1004

Query: 920  --FSNKLKSVYGREL--------------CHDN------------SSGSVEDSKVAR--- 948
               +  L   YG  L               H +            SS S+ D    R   
Sbjct: 1005 NRTARDLPGAYGTNLHQQIRGVVTSNGTSNHPDVKLPSGGNVIQPSSSSLSDIVEGRDSG 1064

Query: 949  ----TEPQQKGTKAS---------KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRF 995
                 E   K T A+           E+ EQYEPG+YIT   +  G + LKRVRFSRRRF
Sbjct: 1065 NFRDDESGVKSTNAALATSSNNQVDAEWIEQYEPGVYITLVAMHDGTRDLKRVRFSRRRF 1124

Query: 996  TEKAAERWWEENQVVVYQKYGI 1017
             E  AE WW EN+  VY+KY +
Sbjct: 1125 GENQAENWWSENKDKVYEKYNV 1146


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/1061 (39%), Positives = 592/1061 (55%), Gaps = 111/1061 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYSG++EKQL+L+ V+KII GQRT  FQ  P+P+++ QSFS+IY+  +RSLDLI
Sbjct: 46   DESMLIWYSGKEEKQLKLSQVSKIIPGQRTAIFQRYPRPEKEYQSFSLIYS--DRSLDLI 103

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIR-RKHNLGL---- 116
            CKDK +AE WF+GL+A I+  R S       E R   +   SP  +IR R+H+  +    
Sbjct: 104  CKDKDEAEVWFVGLKALIT--RGSYQSKWRIEPRSESTSSDSP--HIRTRRHSRSISPFV 159

Query: 117  ---LEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPS 173
               L               PS  L  + F D +SY++     +E S S+ + LS+    S
Sbjct: 160  RSSLWHGDGQGSPVPFESIPSNRLG-KAFCDIISYTA-----AEKSPSRAELLSSPF--S 211

Query: 174  SPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDI 233
            S +    +      + ADT   +      V+ +      E  D L DV  WGEGV  G +
Sbjct: 212  SLNAACVDNSNGRTSTADTV--RVSLSSAVSSSSQGSYHEDFDALGDVFFWGEGVGDGIL 269

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
            GG V  +   +  +VDA LPK LES V+LDV  I+ G +HA LVTK GE+F WGE   GR
Sbjct: 270  GGGVHITGITSSPKVDAFLPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGR 329

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH +  DV  PKL++ L+G+N++ V+CGE  TCA+T SG++YTWG   +   L+G    
Sbjct: 330  LGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSE 389

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
             SHW+P+++   ++G+ VS V+CG WHTA V++ GQLFT+GDGTFG LGHG+  + + P+
Sbjct: 390  ASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPR 449

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG----GKLFTWGDADKGRLGHVDG 469
            EVE+LRGL+   V+CG WHTAA V+I  +       G    GKLFTWG+ D+ RLGH D 
Sbjct: 450  EVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDK 509

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
            E +L P CV  L D +  Q +CG  LT+ LT  G+VYTMGS  +GQLGNP+A  +   +V
Sbjct: 510  EPRLFPECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKVPAIV 569

Query: 530  EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
            EGK+  + ++ I+ GSYHVAVLTS   VYTWGK  NGQLG GD+++R  PT V+ LRD+Q
Sbjct: 570  EGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQ 629

Query: 590  VESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKI 649
            V +V CGS+ TA ICLHK +S  D S CS C  PFGFRRK+HNCYNCGL FC ACS++K 
Sbjct: 630  VRAVACGSNFTAIICLHKWVSSADHSVCSGCHNPFGFRRKRHNCYNCGLVFCKACSSRKS 689

Query: 650  INASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGA 709
            + ASL PN  KP RVCD C+N L+K    G +       PR   +  G+L+++  E    
Sbjct: 690  LKASLAPNMNKPHRVCDDCFNKLKKAAEPGTV-------PRIPKSRAGNLNQKTNEA--- 739

Query: 710  LTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTP 769
               +  ++   K    + R P   L+SAS   S   R  ++S             V P  
Sbjct: 740  ---ADRETLDPKLQTQLSRLPS--LDSASQAESWHSRRDRIS-------ESDTTRVFPVL 787

Query: 770  IPKTQM-----STHSPLLRKISLGSNFI----------------------PIASTVEKDL 802
            I   Q+     S  S  L   S  +NF                       P  S+ + D 
Sbjct: 788  IGNWQLGHFYSSKGSSFLGGTS--TNFFLNPASGSRMPPPATPPLPGRTTPPRSSFD-DS 844

Query: 803  SESNKMLNEEVQRLRDQARNLE-KQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEI 861
               N  L++E+  LR Q  +L  K C++   +++   ++++E  ++A +EAEK K+AKE+
Sbjct: 845  KHMNDSLSDEIISLRAQVEDLTLKSCRL-EAELERKSRQLKEVAAIAADEAEKRKSAKEV 903

Query: 862  IKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFS 921
            IK+L  +L  ++EK+   +          P      KH             + S+  + S
Sbjct: 904  IKSLTAQLKQMAEKLPERRSPS-------PISGSITKH-------------ISSAQNISS 943

Query: 922  NKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSG 981
            ++  S        D++  S +   + R++ Q       K ++  Q EPG+YIT ++LP G
Sbjct: 944  SESHSSSDISPETDSNGNSSDHHMLYRSKSQN-----DKPQWVIQAEPGVYITLSSLPGG 998

Query: 982  QKGLKRVRFSRRRFTEKAAERWWEEN----QVVVYQKYGIE 1018
               LKR+RFSR+ FTE+ AE+WW EN     + V++ Y + 
Sbjct: 999  TNELKRIRFSRKHFTEQQAEKWWAENGTRTDITVHEPYPLH 1039


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/1048 (38%), Positives = 594/1048 (56%), Gaps = 82/1048 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS +KEK LRL+SV+K+I GQRT  F+   +P++   SFS+IY NG+RSLDL+
Sbjct: 36   DETTLIWYSHKKEKFLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLV 95

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED-A 120
            CKD+V+ E WF  L   I+SC R+ +    +++       S  ASY +  H+     D A
Sbjct: 96   CKDQVEVEVWFSALEGLINSCHRNSSVDEHKDR----VSFSDDASYYQDSHSYDSTVDIA 151

Query: 121  TELSQ---VRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHM 177
            + +S+       CG  S S      SD  S  ++   +S + S+++   S   + SS   
Sbjct: 152  SSISRSFNTAGYCGGSSFSFRR---SDAGSDRANMIRTSGADSTRLSISSAAPSSSSQGS 208

Query: 178  ETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAV 237
             T++                                  + L DV +WGE  +  D   + 
Sbjct: 209  GTDDI---------------------------------ESLGDVYVWGE--VWTDAAPS- 232

Query: 238  DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
            DG  + + ++VD L+PK LES V+LDV  I  G++H AL T++GEVF WGE   GRLGH 
Sbjct: 233  DGHTTSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHG 292

Query: 298  VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             + D+S PKLVE +S   V  +SCGEF TCA++ SG+++ WG  ++ A L+G     SHW
Sbjct: 293  TDTDISRPKLVESISVTIVDFISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHW 352

Query: 358  LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            LP+++   L+G++V  VACG WH+A+++++G+L+T+GDGTFG LGHGN ++ + PKEVE+
Sbjct: 353  LPKRVSGPLEGLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEA 412

Query: 418  LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
            L G +   VACG WH+AAIV+  V +   N +  KL+TWGD DK RLG  D E +L+PTC
Sbjct: 413  LNGFRTIKVACGVWHSAAIVEATV-QTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTC 471

Query: 478  VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
            V  L++ +F Q +CG+ +TV L   G VYTMGS+ +GQLGNPK+  +   +V+ KL  E 
Sbjct: 472  VQALLEHNFHQLACGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHEL 531

Query: 538  VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
            V+ IS G+ HVAVLTS   VYTWG  ANG+LG GD  +++ PT VEAL+DR V+S+ CGS
Sbjct: 532  VEEISCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCGS 591

Query: 598  SITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPN 657
            + T  IC+HK +S  DQS C+ CR  FGF RK+HNCYNCGL  C ACS++K++ A+L P 
Sbjct: 592  NFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPT 651

Query: 658  KGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRG-- 715
             GKP RVCD+C+  L+    +     + N + R   ++      E++  +   TPS    
Sbjct: 652  PGKPHRVCDSCFLKLKNADTTTSNANRRNAATRR--SIDSREKPEIRPPRLVATPSAEPV 709

Query: 716  QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRF---KTHCHEKSVEPTP-IP 771
            +    K ++N + K  + +  AS  S+ LQ +  +    +F   +      SV  +P IP
Sbjct: 710  KYMEVKVAKN-DMKSADSIMKASQASALLQ-FKDLGFAAQFGGLQPMGMSPSVAISPAIP 767

Query: 772  KTQMSTHSPLLRKI-SLGSNFIPIASTVEKD-LSESNKMLNEEVQRLRDQARNLEKQCQI 829
               ++  S   +K  S  ++ IP +  V+ D L +SN +LN+E+ RL+ Q  +L+++C+ 
Sbjct: 768  SFSVAPPSAYTKKAKSPPASAIPQSCKVDVDHLQKSNDLLNQELLRLQSQVEDLKQKCEA 827

Query: 830  GNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISA-AKEAKEGVDA 888
             ++++Q+  +K +   S+A EE+ K  AA E +K L   L  + +K+   A ++ + +  
Sbjct: 828  QHEQLQKSDKKAKSVASMATEESSKRNAAVEFVKFLDHELKGIVDKLPVDAADSMKALQM 887

Query: 889  NLPPKL-DTDKHP-EVKLPKDRKVDSLCSSPI----VFSNKLKSVYGRELCHDN------ 936
                 L +   HP E+  P +R    L S       + ++K   V    +  D       
Sbjct: 888  KTQSLLREQSGHPSELMNPMERDHLHLSSGGSGRYDLVTHKSGGVGYLTMSQDGSSASGS 947

Query: 937  ---------SSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKR 987
                     S   +E+S  A  +   K     +++  EQ+EPG+Y+T   L  G K  KR
Sbjct: 948  AISITSESPSHRFMENSAKAHGDFAPKHGTHGEVQLIEQFEPGVYVTLIQLKDGTKVFKR 1007

Query: 988  VRFSRRRFTEKAAERWWEENQVVVYQKY 1015
            VRFS+RRF E  AE WW ENQ  V++KY
Sbjct: 1008 VRFSKRRFAENQAEEWWRENQERVFKKY 1035


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/943 (40%), Positives = 544/943 (57%), Gaps = 104/943 (11%)

Query: 126  VRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETENFMKW 185
            V S+ GSP L + +      L +S   F   + + S +      +TP     +  N +K 
Sbjct: 89   VHSIYGSPRL-MQKNVLQSNLDFSEPFFSPRQRTWSDLDYYMEKVTP-----DVVNRVKH 142

Query: 186  ---ELNYAD-------TRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
               ++  AD       T+ PK +S   +   YG+        LKD+ +WGE       G 
Sbjct: 143  SCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGA------TSLKDIFVWGEVP-----GN 191

Query: 236  AVD-GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
             +D G VS+     +  LP+LL +  ++DVQ+++ G KHAA+VTK+GEVF WG    GRL
Sbjct: 192  VLDHGDVSK----ANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRL 247

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GHKV++ VS PK++E L+   V++++ G   TCA++ SGE+Y WG   H   L G++  R
Sbjct: 248  GHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQR 307

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            S W P KLF  LDG+ + K+ACG WHTAI+S++GQ+FTYGDGTFGVLGHG+   V++PK+
Sbjct: 308  SQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQ 367

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            VESL+G++ K++ACGPWHTAAIV+ M    KSNA  GKLFTWGDAD+G+LGH D + KL+
Sbjct: 368  VESLKGVRAKAIACGPWHTAAIVERM-GTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV 426

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV  L DFDF Q SC +  T+ LT  G V+T+GS  HG+LGNP ++D SI ++EG LK
Sbjct: 427  PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLK 486

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ ISSGS H+AVLT  G V+TWGK   GQLGLGD  +R  PT VEAL D+QV S+ 
Sbjct: 487  TEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIA 546

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CG + T AICLH+ +S  DQS CS C++ FGF RKKHNCYNCG  FC++CS  K+  A+L
Sbjct: 547  CGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAAL 606

Query: 655  TPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
             P++ K  RVCD C++ +QK+    +L  Q+                  K +K  + P  
Sbjct: 607  APDRSKRYRVCDACFSQMQKVEEHSKLDPQQ------------------KIQKDEVCPIE 648

Query: 715  GQSFTSKQSRNVERKPGECLESASSLSSGLQ--------------RWGQVSCPIRFKTHC 760
             +S+T K +R + ++    +E  +S  S  Q              RWG V CP +F+  C
Sbjct: 649  IRSYTPKLAR-IFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLVECPSQFR--C 705

Query: 761  HEKSVEPTPIPKTQMSTHSPLLRKIS------LGSNFIPIASTVEKDLSESNKMLNEEVQ 814
              +S+ P      + +    ++R ++        S+ +  A+  + +L     +L EEV+
Sbjct: 706  VRESI-PYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDSKAELDLMENILLEEVK 764

Query: 815  RLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSE 874
            +L++Q   L KQC+  + KVQ  ++K+EE W +A++EA KCKAAK+IIK L  +   LS+
Sbjct: 765  QLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAAKDIIKVLIDQHDFLSK 824

Query: 875  KISAAKE------------AKEGVDANLPPKLD----TDKHPEVKLPKD----RKVDSLC 914
             + A ++            + + + A LP   D    T +  + K  +D    R+VD  C
Sbjct: 825  NLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQSKSNRDHHNSRQVDREC 884

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVE--DSKVARTEPQQKGTKASKLEYAEQYEPGIY 972
            + P + S    SV  +  C   S+GS    +   A T P             EQ E G+Y
Sbjct: 885  TQPSIASMADYSVMHQN-CRRTSNGSTRCTEGTDATTAPTDSNG------VIEQIERGVY 937

Query: 973  ITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             T  T P G+K +KR+RFSR+ F E  A++WWE N+ +++ KY
Sbjct: 938  ATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKY 980



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 26/32 (81%)

Query: 2  DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVN 33
          DEK L+WYS  +EK+L L+SV+ +++G +TV+
Sbjct: 59 DEKMLMWYSKDREKRLNLSSVSSVVLGHKTVH 90


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/943 (40%), Positives = 543/943 (57%), Gaps = 104/943 (11%)

Query: 126  VRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETENFMKW 185
            V S+ GSP L + +      L +S   F   + + S +      +TP     +  N +K 
Sbjct: 77   VHSIYGSPRL-MQKNVLQSNLDFSEPFFSPRQRTWSDLDYYMEKVTP-----DVVNRVKH 130

Query: 186  ---ELNYAD-------TRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
               ++  AD       T+ PK +S   +   YG+        LKD+ +WGE       G 
Sbjct: 131  SCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGA------TSLKDIFVWGEVP-----GN 179

Query: 236  AVD-GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
             +D G VS+     +  LP+LL +  ++DVQ+++ G KHAA+VTK+GEVF WG    GRL
Sbjct: 180  VLDHGDVSK----ANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRL 235

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GHKV++ VS PK++E L+   V++++ G   TCA++ SGE+Y WG   H   L G++  R
Sbjct: 236  GHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQR 295

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            S W P KLF  LDG+ + K+ACG WHTAI+S++GQLF YGDGTFGVLGHG+   V++PK+
Sbjct: 296  SQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQ 355

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            VESL+G++ K++ACGPWHTAAIV+ M    KSNA  GKLFTWGDAD+G+LGH D + KL+
Sbjct: 356  VESLKGVRAKAIACGPWHTAAIVERM-GTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV 414

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV  L DFDF Q SC +  T+ LT  G V+T+GS  HG+LGNP ++D SI ++EG LK
Sbjct: 415  PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLK 474

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ ISSGS H+AVLT  G V+TWGK   GQLGLGD  +R  PT VEAL D+QV S+ 
Sbjct: 475  TEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIA 534

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CG + T AICLH+ +S  DQS CS C++ FGF RKKHNCYNCG  FC++CS  K+  A+L
Sbjct: 535  CGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAAL 594

Query: 655  TPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
             P++ K  RVCD C++ +QK+    +L  Q+                  K +K  + P  
Sbjct: 595  APDRSKRYRVCDACFSQMQKVEEHRKLDPQQ------------------KIQKDEVCPIE 636

Query: 715  GQSFTSKQSRNVERKPGECLESASSLSSGLQ--------------RWGQVSCPIRFKTHC 760
             +S+T K +R + ++    +E  +S  S  Q              RWG V CP +F+  C
Sbjct: 637  IRSYTPKLAR-IFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLVECPSQFR--C 693

Query: 761  HEKSVEPTPIPKTQMSTHSPLLRKIS------LGSNFIPIASTVEKDLSESNKMLNEEVQ 814
              +S+ P      + +    ++R ++        S+ +  A+  + +L     +L EEV+
Sbjct: 694  VRESI-PYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDSKAELDLMENILLEEVK 752

Query: 815  RLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSE 874
            +L++Q   L KQC+  + KVQ  ++K+EE W +A++EA KCKAAK+IIK L  +   LS+
Sbjct: 753  QLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAAKDIIKVLIDQHDFLSK 812

Query: 875  KISAAKE------------AKEGVDANLPPKLD----TDKHPEVKLPKD----RKVDSLC 914
             + A ++            + + + A LP   D    T +  + K  +D    R+VD  C
Sbjct: 813  NLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQSKSNRDHHNSRQVDREC 872

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVE--DSKVARTEPQQKGTKASKLEYAEQYEPGIY 972
            + P + S    SV  +  C   S+GS    +   A T P             EQ E G+Y
Sbjct: 873  TQPSIASMANYSVTHQN-CRRTSNGSTRCTEGTDATTAPTDSNG------VIEQIERGVY 925

Query: 973  ITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             T  T P G+K +KR+RFSR+ F E  A++WWE N+ +++ KY
Sbjct: 926  ATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKY 968



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 26/32 (81%)

Query: 2  DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVN 33
          DEK L+WYS  +EK+L L+SV+ +++G +TV+
Sbjct: 47 DEKMLMWYSKDREKRLNLSSVSSVVLGHKTVH 78


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/943 (40%), Positives = 543/943 (57%), Gaps = 104/943 (11%)

Query: 126  VRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETENFMKW 185
            V S+ GSP L + +      L +S   F   + + S +      +TP     +  N +K 
Sbjct: 79   VHSIYGSPRL-MQKNVLQSNLDFSEPFFSPRQRTWSDLDYYMEKVTP-----DVVNRVKH 132

Query: 186  ---ELNYAD-------TRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
               ++  AD       T+ PK +S   +   YG+        LKD+ +WGE       G 
Sbjct: 133  SCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGA------TSLKDIFVWGEVP-----GN 181

Query: 236  AVD-GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
             +D G VS+     +  LP+LL +  ++DVQ+++ G KHAA+VTK+GEVF WG    GRL
Sbjct: 182  VLDHGDVSK----ANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRL 237

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GHKV++ VS PK++E L+   V++++ G   TCA++ SGE+Y WG   H   L G++  R
Sbjct: 238  GHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQR 297

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            S W P KLF  LDG+ + K+ACG WHTAI+S++GQLF YGDGTFGVLGHG+   V++PK+
Sbjct: 298  SQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQ 357

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            VESL+G++ K++ACGPWHTAAIV+ M    KSNA  GKLFTWGDAD+G+LGH D + KL+
Sbjct: 358  VESLKGVRAKAIACGPWHTAAIVERM-GTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV 416

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV  L DFDF Q SC +  T+ LT  G V+T+GS  HG+LGNP ++D SI ++EG LK
Sbjct: 417  PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLK 476

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ ISSGS H+AVLT  G V+TWGK   GQLGLGD  +R  PT VEAL D+QV S+ 
Sbjct: 477  TEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIA 536

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CG + T AICLH+ +S  DQS CS C++ FGF RKKHNCYNCG  FC++CS  K+  A+L
Sbjct: 537  CGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAAL 596

Query: 655  TPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
             P++ K  RVCD C++ +QK+    +L  Q+                  K +K  + P  
Sbjct: 597  APDRSKRYRVCDACFSQMQKVEEHRKLDPQQ------------------KIQKDEVCPIE 638

Query: 715  GQSFTSKQSRNVERKPGECLESASSLSSGLQ--------------RWGQVSCPIRFKTHC 760
             +S+T K +R + ++    +E  +S  S  Q              RWG V CP +F+  C
Sbjct: 639  IRSYTPKLAR-IFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLVECPSQFR--C 695

Query: 761  HEKSVEPTPIPKTQMSTHSPLLRKIS------LGSNFIPIASTVEKDLSESNKMLNEEVQ 814
              +S+ P      + +    ++R ++        S+ +  A+  + +L     +L EEV+
Sbjct: 696  VRESI-PYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSANDSKAELDLMENILLEEVK 754

Query: 815  RLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSE 874
            +L++Q   L KQC+  + KVQ  ++K+EE W +A++EA KCKAAK+IIK L  +   LS+
Sbjct: 755  QLQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAAKDIIKVLIDQHDFLSK 814

Query: 875  KISAAKE------------AKEGVDANLPPKLD----TDKHPEVKLPKD----RKVDSLC 914
             + A ++            + + + A LP   D    T +  + K  +D    R+VD  C
Sbjct: 815  NLLAGEKLDNSRIMPSHIASAKSLKAELPDPPDKNVFTSEFQQSKSNRDHHNSRQVDREC 874

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVE--DSKVARTEPQQKGTKASKLEYAEQYEPGIY 972
            + P + S    SV  +  C   S+GS    +   A T P             EQ E G+Y
Sbjct: 875  TQPSIASMANYSVTHQN-CRRTSNGSTRCTEGTDATTAPTDSNG------VIEQIERGVY 927

Query: 973  ITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             T  T P G+K +KR+RFSR+ F E  A++WWE N+ +++ KY
Sbjct: 928  ATVVTSPGGKKCIKRIRFSRKHFGEDQAQKWWEANESMIFGKY 970



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 26/32 (81%)

Query: 2  DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVN 33
          DEK L+WYS  +EK+L L+SV+ +++G +TV+
Sbjct: 49 DEKMLMWYSKDREKRLNLSSVSSVVLGHKTVH 80


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/863 (41%), Positives = 515/863 (59%), Gaps = 69/863 (7%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D L DV +WGE +    +    D + +   T+ D LLP+ LES V+LDV +I+ G +HAA
Sbjct: 234  DALGDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDVHHIACGFRHAA 293

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            +VT++GEVF WGE   GRLGH V  DV  P+LVE L+   V  ++CGEF TCA+T +GEI
Sbjct: 294  MVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTMAGEI 353

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG   H A L+G     SHW+P+++   L+G++V+ V CG WHTA+V+++GQLFT+GD
Sbjct: 354  YTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGD 413

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            GTFGVLGHGN +N++ PKEVESL GL+  +VACG WHTAA+V+++V +  S+   GKLFT
Sbjct: 414  GTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFT 473

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD DK RLGH D E +L PTCV  L+DF+F + +CG  LTVGLT  G V+TMGS V+GQ
Sbjct: 474  WGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQ 533

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LGNP A  +   +VE KL  E V+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD ++
Sbjct: 534  LGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGED 593

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
            R+TPT VEAL+D+ V+ + CG++ +AAICLHK +S  +QS CS CR  FGF RK+HNCYN
Sbjct: 594  RKTPTLVEALKDKHVKYIACGANYSAAICLHKWVSGSEQSQCSSCRQAFGFTRKRHNCYN 653

Query: 636  CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
            CGL  C +CS++K   A+L PN  KP RVCD+C+  L K++ +     + N  PR    L
Sbjct: 654  CGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFTKLNKVSDASN-TNRRNAGPR----L 708

Query: 696  QGSLSEEVKEEKGALT----PSR---GQSFTSKQSRNVERKPGECLESASSLSSGLQRWG 748
             G   + + +    L+    PS     +   SK ++  ++     L  +S   S LQ   
Sbjct: 709  SGENKDRLDKADLRLSKLTLPSNLDLIKQLDSKAAKQGKKADTFSLVWSSQAPSLLQLKD 768

Query: 749  QV-SCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIAST--------VE 799
             V S  I  +    +  + P+ +    +   SP  R+ S   +  P+ +T        + 
Sbjct: 769  VVLSSTIDLRPKVPKPVLTPSGVSSRSV---SPFSRRPSPPRSATPVPTTSGLSFSKSIA 825

Query: 800  KDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAK 859
              L ++N++LN+EV +LR Q  +L ++C+    ++Q+  +K++EA ++A EE+ K KAAK
Sbjct: 826  DSLKKTNELLNQEVLKLRTQVESLRQRCEFQESELQKSAKKVQEAMAVAAEESAKSKAAK 885

Query: 860  EIIKALAVRLHTLSEKISAAKEAKEGV-DANLPPKLDTD--KHPEVKLPKDRKVDSLCSS 916
            +++K+L  +L  ++E++       E +  A +P  L+T+    P+    +  + DS+  +
Sbjct: 886  DVMKSLTAQLKDMAERLPPGVYDTESMRPAYVPNGLETNGIHFPDANGKRHSRSDSISGT 945

Query: 917  PIVFSNKLKSVY------------------GRELCHDN--SSGSVEDS------KVARTE 950
             +    ++ S+                   GR+   D   S+G  + S       VA  E
Sbjct: 946  SLASPTRVDSISINGTLGITQSLRDSPGANGRDDHPDVRLSNGGAQPSCNSVSEAVAGKE 1005

Query: 951  PQ--QKGTKASK--------------LEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRR 994
            P+  Q G    K               E+ EQYEPG+YIT  +L  G + LKRVRFSRRR
Sbjct: 1006 PRSPQDGENGMKSRDSSLVANGNHVEAEWIEQYEPGVYITLVSLRDGTRDLKRVRFSRRR 1065

Query: 995  FTEKAAERWWEENQVVVYQKYGI 1017
            F E  AE WW EN+  VY+KY +
Sbjct: 1066 FGEHQAETWWSENREKVYEKYNV 1088



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 60/86 (69%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S   E+ L+L SV+KII GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 46  DETTLIWISSSGERSLKLASVSKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRT 87
           CKDKV+AE W  GL+A I S +  R+
Sbjct: 106 CKDKVEAEVWIAGLKALIISGQGGRS 131


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/1039 (38%), Positives = 588/1039 (56%), Gaps = 78/1039 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+S +KEK LRL+SVTKII GQRT  F     P++   SFS+I+ NG+RSLDL+
Sbjct: 36   DETSLIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLV 95

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNL-GLLEDA 120
            CKD+ + E WF  L   ISS R+    S + E +   S  S   +Y + +H+    L+ A
Sbjct: 96   CKDQAEVEVWFSALEGLISSFRKK---SLINEHKDRVS-FSEEVTYYQDRHSYDSTLDIA 151

Query: 121  TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
            + +S               R F+    Y   + +S   S      L+ I T ++      
Sbjct: 152  SNIS---------------RSFNSA-GYCGTNSFSFRKSDVGFDRLNMIRTSAAD----- 190

Query: 181  NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
                       +R   + +    +   G+  IE    L DV +WGE  +  D+  + DG 
Sbjct: 191  ----------SSRVSISSALSSYSQGSGTDDIES---LGDVYVWGE--VWTDVTPS-DGH 234

Query: 241  VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
             S + ++VD L+PK LES V+LDV  I+ G +H AL T++GEVF WGE   GRLGH  + 
Sbjct: 235  TSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDA 294

Query: 301  DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            D+S PKLVE LS   V  +SCGEF TCA+T SG+++ WG  ++   L+G     S+WLP+
Sbjct: 295  DISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPK 354

Query: 361  KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            K+   L+G++V  VACG WH+A+ ++SG+L+T+GDGTFGVLGHG+ + ++ PKEVE+L G
Sbjct: 355  KVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSG 414

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
             K   VACG WH+AAIV++  ++  +N +  KL+TWGD DK RLGH D E +L+P CV  
Sbjct: 415  FKTIKVACGIWHSAAIVEV-TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQA 473

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
            L++++F Q +CG  +TV L   G+V+TMGS+ +GQLGNPK+  +   +V+ +L  E V+ 
Sbjct: 474  LLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
            IS G+ HV VLTS   VYTWG  ANG+LG GD ++R+ P  VEAL+DR V+S+ CGS+ T
Sbjct: 534  ISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFT 593

Query: 601  AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
              IC+HK +S  DQS C+ CR  FGF RK+H+CYNCGL  C ACS++K++ A+L P  GK
Sbjct: 594  TCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGK 653

Query: 661  PSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS 720
            P RVCD+C+  L K   +G      N + RN +  + S+    K E+  + PSR  +  +
Sbjct: 654  PHRVCDSCFLKL-KAAETG----SNNSNRRNAVTRR-SIDGREKLERPEIRPSRTTA-PA 706

Query: 721  KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSP 780
            +  +  E K       AS +SS LQ +  +S      T           +P   +ST SP
Sbjct: 707  ESVKYTEVKAARNDMRASQISSLLQ-FKDLSFSALQPTAMSPAVTMSPAVP--ALSTPSP 763

Query: 781  LLRKISLGSNFIPIASTVEKD-LSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQ 839
              +K    +  IP     + D L +SN++LN+E+ +L+ Q  +L+++C+  ++++Q   +
Sbjct: 764  YTKKTKSPAPAIPQFPKTDIDNLQKSNELLNQEMLKLQSQVDSLKQKCEAQHEQLQISDK 823

Query: 840  KIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI-SAAKEAKEGVDANLPPKLDTDK 898
            K +   S+A EE  +C A  E +K L   L+ +  ++ S A E+ + +   +   L   +
Sbjct: 824  KTKTVVSMATEEYTRCSAVVEFVKFLDNELNGIVHELPSDAAESLKALQNQVQALLREQR 883

Query: 899  -HP-EVKLPKDRKVDSLCSSPIV---FSNKLKSVYGRELCHDNSSGSVEDSKVARTE--P 951
             HP E+  P D     L S       FSN  +S   R L     + S   S ++ T   P
Sbjct: 884  SHPSELLNPMDHDGIQLSSGGNALHDFSNH-RSGSTRYLFMSQDASSASGSAISLTSEPP 942

Query: 952  QQKGTK---------------ASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFT 996
              +G +                 +++  EQ+EPG+Y+T   L  G K  KRVRFS+++F 
Sbjct: 943  SHRGMEHHAKVPNDFVPKHDTHGEVQLIEQFEPGVYVTLIQLKDGSKVFKRVRFSKKKFA 1002

Query: 997  EKAAERWWEENQVVVYQKY 1015
            E  AE WW ENQ  V++KY
Sbjct: 1003 ENQAEEWWRENQERVFKKY 1021


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/1048 (37%), Positives = 577/1048 (55%), Gaps = 86/1048 (8%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS  +E+ L+L+S+++II GQRT  F+   +P++   SFS++Y NGERSLDLI
Sbjct: 46   DETTLIWYSHGEERTLKLSSISRIIPGQRTAVFRRYLRPEKDYLSFSLLYRNGERSLDLI 105

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK +AE WFLGL+  IS           R+  G            R + +   ++DA 
Sbjct: 106  CKDKGEAEVWFLGLKNLISP----------RQHHG------------RSRSDFSDVQDAN 143

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
            E  Q     G+   +L    FS+ L+   DS     S  S +  +S+ +     +M+   
Sbjct: 144  EFFQSSRPFGA---TLE---FSNSLARGRDSI-DLNSRESHLHLVSSDVGSERANMQ--- 193

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                 L  +     ++      + + G    +  + L DV +WGE  +  D+    DG+ 
Sbjct: 194  -----LRTSGGDGFRSSVSSTPSCSSGGSGPDDIESLGDVYVWGE--IWTDLV-LPDGTS 245

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            SQ   + D L PK LE+ V+LDVQ I+ G +H ALVT++GEVF WGE   GRLGH ++ D
Sbjct: 246  SQIPVKNDVLTPKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRD 305

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
             S P LVE L+  +V  V+CGE+ TCA+T S ++YTWG     + ++G     SHW+P++
Sbjct: 306  FSRPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKR 365

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +  +L+G++V  VACG WH+A+ +++G+L+T+GDGT+GVLGHG+ ++V  P+EV+ L GL
Sbjct: 366  VVGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL 425

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +   VACG WHTAAIV++M  +  SN    KLFTWGD DK RLGH + E  LLPTCV+ L
Sbjct: 426  RTIKVACGVWHTAAIVEVM-SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSL 484

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            +D++F Q +CG  +TV LT  G V+TMG   +GQLGNP +      +V+ +L  EFV+ I
Sbjct: 485  IDYNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEI 544

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            S G+YH  VLTS   V++WG+ +NG+LG GD ++R+ PT +EAL+DR V+S+ CGS+ TA
Sbjct: 545  SCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTA 604

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
            +IC+HK +S  DQS C+ CR  FGF RK+HNCYNCGL  C +CS+KK + A+L P  GKP
Sbjct: 605  SICIHKWVSGADQSVCTGCRQAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKP 664

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR------- 714
             RVCD+CY  L+                R L   + S   + + ++G + PSR       
Sbjct: 665  HRVCDSCYAKLKSAEAGNNFCVN-----RKLTANRRSTDYKERFDRGDVRPSRILLSPTT 719

Query: 715  --GQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKS----VEPT 768
               +    K  R   R     +  AS + S LQ+   ++ P       +         P+
Sbjct: 720  EPVKYHEIKSVRPGSRPTSPSMVRASQVPS-LQQLKDIAFPSSLSAIQNALRPALVAPPS 778

Query: 769  PIPKTQMSTHSPLLRKISLGSNFIPIAS-TVEKDLSESNKMLNEEVQRLRDQARNLEKQC 827
            P P       SP  R+ S   +  P+ S +V   L +SN+ L ++  +L+ + +NL+++C
Sbjct: 779  PPPMGNSRPASPYARRPSPPRSTTPVFSKSVIDSLKKSNETLVQDKSKLQREVKNLKQKC 838

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD 887
             I   ++Q  Q+   EA SL  EE+ KCK AK+++  +  +L  + +K+       E  D
Sbjct: 839  DIQGAEIQNLQKNATEAASLVEEESSKCKIAKKLVTTITEQLKEMKDKL-----PPEIWD 893

Query: 888  ANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVA 947
                  +       + + +  K  SL +S    +N      G     D+SS  +ED    
Sbjct: 894  GENFKSMYAQAEAFLNMVETSKTSSLPTSHEKTNNLTALNNGSTPSLDDSSKRIEDDGSG 953

Query: 948  RTEPQQKGTKA--------------------SKLEYAEQYEPGIYITFTTLPSGQKGLKR 987
            R +  Q+   +                     + +  EQ+EPG+Y T   L +G K  KR
Sbjct: 954  RKDLTQENVNSLLESKKTSENGSRSPLSSTEGEKQVIEQFEPGVYATLVVLSNGTKIFKR 1013

Query: 988  VRFSRRRFTEKAAERWWEENQVVVYQKY 1015
            VRFS+RRF E+ AE WW +N+  + ++Y
Sbjct: 1014 VRFSKRRFDEQQAEDWWSKNKDRLLKRY 1041


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/883 (41%), Positives = 526/883 (59%), Gaps = 69/883 (7%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S  KEK L+L+SV++++ GQRT+ FQ    P++   SFS+IY +G+RSLDLI
Sbjct: 39  DESTLIWVSNNKEKSLKLSSVSRVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLI 98

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
           CKDKV+AE WF GL   IS  +                                      
Sbjct: 99  CKDKVEAEVWFAGLNVLISPGQHG------------------------------------ 122

Query: 122 ELSQVRSLCGSPSLSLSERCFSDGL-----SYSSDSFYSSESSSSQIQNLSNIITPSSPH 176
             SQ + + G  + +LS  C  D       +Y++DSF +  SS++  ++ S+     S  
Sbjct: 123 --SQHQHIDGIRNGALSFECGRDSSLSSSSAYTTDSFENKLSSANSAKDRSSGEFTYSER 180

Query: 177 METENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGA 236
            +  + M+ +   +D R   + +    +   G    +  +   DV +WGE +        
Sbjct: 181 TDVSD-MQVKGASSDIRISVSSALSTSSHGSG----DDSESFGDVYVWGEVMCDTTCRQG 235

Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
            D +        D L+PK LES VMLDV  ++ G KHAALVT++ EVF WGE   GRLGH
Sbjct: 236 SDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGH 295

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
                +  P+LVE LS  NV++++CGEF TCA+T +G++YTWG   H A L+G   + SH
Sbjct: 296 GAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSH 355

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
           W+P+++   L+G++VS V+CG WHTA++++SG+L+T+GDGTFGVLGHGN + +S PKEVE
Sbjct: 356 WIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 415

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           SL+GL+  SV+CG WHTAA+V++++   +SN   GKLFTWGD DK RLGH D   KL PT
Sbjct: 416 SLKGLRTISVSCGVWHTAAVVEVIM--AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPT 473

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           CV  L+D++F +A CG  LT+GLT  G ++T GS+V+GQLGNP    R   +VE KL   
Sbjct: 474 CVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGG 533

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  ++ G+YHVAVLT  G VYTWGK ANG+LG GD  +R+TPTFVEALRDR V+ + CG
Sbjct: 534 GVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 593

Query: 597 SSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTP 656
           S  TAAIC HKS+S  +QS CS CR PFGF RK+HNCYNCGL  C +CS+KK + A+L+P
Sbjct: 594 SGFTAAICQHKSVSGMEQSQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSP 653

Query: 657 NKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
           N GKP RVCD+CY  L K+  SG +   +N +PR    + G    +  + KG    S   
Sbjct: 654 NPGKPYRVCDSCYLKLSKVLDSG-IGHNKNNTPR----IPGDSKADKMDSKGNRVAS--- 705

Query: 717 SFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMS 776
           + +S   +N++ K       A+  +       Q    ++ K      + +  P   T   
Sbjct: 706 ANSSDMIKNLDVK-------AAKQTKKYDYPPQFPAILQLKDIPFIGAADQQPNDSTY-- 756

Query: 777 THSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQE 836
             SPLLR  +L S+    + + +  L ++N++L +EVQ+L+++  +L +Q +  +  +Q+
Sbjct: 757 -SSPLLRLPNLNSSSSLSSESFDI-LRDANELLKQEVQKLKEEVNSLRQQREQQDADLQK 814

Query: 837 CQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAA 879
            + K  EA +LA EEA K KAAK++IK+L  +L  ++E++  A
Sbjct: 815 SEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLKEMAERLPPA 857



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+Y+T  +L  G K LKRVRFSRRRF E  AE WW +N+  VY KY +
Sbjct: 990  EWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYDKYNV 1045


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/1059 (37%), Positives = 586/1059 (55%), Gaps = 111/1059 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYS  KEK LRL+SV+K+I GQRT  F+   +P++   SFS+IY NG+RSLDL+
Sbjct: 41   DENTLVWYSHNKEKCLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLV 100

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKD+ + E WF  L + I+SCR                              L  L D  
Sbjct: 101  CKDQAEVEVWFSTLESLITSCR------------------------------LNFLNDG- 129

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
               Q   +  S  +++    + D  SY  D+     SS ++  N +   TP+S +    +
Sbjct: 130  ---QTDRVSFSEDVTI----YQDSTSY--DTTLDIASSITRSFNSAGYSTPNSLNSIRAD 180

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPL-----IERKDILKDVMIWGE---GVLGGDI 233
                 +N    R    ++ R+   +  S       ++  + L DV +WGE    VL    
Sbjct: 181  VGSDRVNM--LRASTGDNSRVSISSAPSSSSQSSGLDDIESLGDVYVWGEVWTEVL---- 234

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
                +GS +   ++ D L+PK LES V+LDVQ I+ G++H  L T++GEVF WGE   GR
Sbjct: 235  --PSEGSSNYLCSKTDFLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGR 292

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH  + D+  PKLVE L+  NV+ ++CGEF TC +T SG++Y WG  ++ A L+G    
Sbjct: 293  LGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTG 352

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
             SHWLP+++   L+G++V  VACG WH+A+  +SG+LFT+GDGTFG LGHG+ ++V+ PK
Sbjct: 353  VSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPK 412

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            EVE+L G +   VACG WH+AAIV+I   +  +NA+  KLFTWGD DK RLGH D E KL
Sbjct: 413  EVEALSGFRAMKVACGVWHSAAIVEIS-GQASTNAMSRKLFTWGDGDKNRLGHGDKEAKL 471

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
            +PTCV  LVD +F Q +CG  +TV L   G V+TMGS+ +GQLGNPKA  +   +V+ KL
Sbjct: 472  VPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKL 531

Query: 534  KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
              E V+ IS GS HVA LTS   VYTWG  ANG+LG G  ++++ PT V+AL+DR V+S+
Sbjct: 532  GNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSI 591

Query: 594  VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINAS 653
             CGS+ T  IC+HK +S  DQS CS CR PFGF RK+HNCYNCGL  C ACS++K++ A+
Sbjct: 592  SCGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAA 651

Query: 654  LTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS 713
            L P  GKP RVCD+C+  L K   +G +    + + RN++  + S+  + K E+  + PS
Sbjct: 652  LAPTPGKPHRVCDSCFMKL-KAADTGVI---SSYNKRNVITRR-SIDIKDKLERPEIRPS 706

Query: 714  R------GQSFTSKQSRNV--ERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSV 765
            R       +    ++++NV  E KP + +         + +  QV   ++FK      + 
Sbjct: 707  RLATTSPAEPVKYQETKNVRNETKPADPMS--------MMKASQVPAMLQFKDMAFAGTF 758

Query: 766  EPTPIPKT------QMSTHSPLLRKISLGSNFIP-------IASTVEKD-LSESNKMLNE 811
               P          QM    P+           P       +   V+ D L ++N++LN+
Sbjct: 759  GTVPTTVKSMTMGGQMQMGMPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQ 818

Query: 812  EVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHT 871
            ++ +L+ Q   L+++C+  ++++Q+ ++K ++A S+A EE+ +     + +K L   L  
Sbjct: 819  DISKLQSQVNKLKQKCETQDEQLQKAERKAKQAASMASEESARRNTVLDFVKHLDSELKV 878

Query: 872  LSEKI------------SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIV 919
            +++++            S ++    G  +NL        H ++   +     SL   P+ 
Sbjct: 879  IADRVPGDVADNLKTLQSQSERFLAGQSSNLVEITGLTGH-DIGHHRSSSTGSL---PVS 934

Query: 920  FSNKLKSVYGRELCHDNSSGS---VEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
                  +  G  +   + S     +E++  A  +   K     +++  EQ+EPG+Y+T  
Sbjct: 935  QDGSSGNASGSSIAMASDSPCHRIMENNLKAPGDFAPKYGTHGEVQLIEQFEPGVYVTLI 994

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             L  G K  KRVRFS+RRF E+ AE WW ENQ  V++KY
Sbjct: 995  QLRDGTKVFKRVRFSKRRFAEQQAEEWWRENQERVFKKY 1033


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/1201 (36%), Positives = 618/1201 (51%), Gaps = 243/1201 (20%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRT------------------------------ 31
            DE  L W+S  +E+ L+L+SV+KII GQRT                              
Sbjct: 74   DELSLFWFSSSEERSLKLSSVSKIIPGQRTGMGRKSLGGDGKEKLRRGREGKEGKGRKGR 133

Query: 32   -----VNFQCQPQPDRKQQSFSIIYANGERSLDLICKDKVQAESWFLGLRAAISSCRRSR 86
                   FQ  P+P++   SFS+IY +G+RSLDLICKDKV+AE W  GL A ISS +  R
Sbjct: 134  EKGGKAVFQRFPRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLGALISSGQGGR 193

Query: 87   TFSCLREKRGVQSCVSSPASYIRRKHNLGL-LEDATELSQVRSLCGSPSLSLSERCFSDG 145
                               S I    + GL L+D   L+       SPS S S R   D 
Sbjct: 194  -------------------SKIDGWCDGGLYLDDGKNLTS-----NSPSES-SVRASQD- 227

Query: 146  LSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETENFMKWELNYADTRCP----KNESHR 201
                     SS   S+ I N+S    P S H   EN + +E ++A    P    K  S  
Sbjct: 228  --------ISSPDISASIPNVS----PKSFH--PENTVNFEKSHAPANSPNMQVKGSSSD 273

Query: 202  LV---------TPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALL 252
            +          T ++GS   +  D L DV IWGE +    +    D +VS    + D LL
Sbjct: 274  VFRVSVSSAPSTSSHGSA-PDDYDALGDVYIWGEVISENVVKVGADKNVSYCSPRTDILL 332

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            PK LES V+LDV  I+ G KHAALVT++GE+F WGE   GRLGH V  +V  P LVE L+
Sbjct: 333  PKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALA 392

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
               V  V+CGEF TCA+T +GEIYTWG   H A L+G     SHW+P+++   L+G++V+
Sbjct: 393  SSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVA 452

Query: 373  KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
             V CG WHTA+++++GQLFT+GDGTFGVLGHG+ +N+S P+EVESL GL+  SVACG WH
Sbjct: 453  FVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWH 512

Query: 433  TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
            TAAIV+++V +  ++   GKLFTWGD DK RLGH D + +L PTC++ L+D++F + +CG
Sbjct: 513  TAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACG 572

Query: 493  RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              LTVGLT  G+V+TMGS V+GQLGNP++  +   +VE KL  E V+ I+ G+YHV VLT
Sbjct: 573  HSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLT 632

Query: 553  SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
            S   VYTWGK ANG+LG GD ++R+TPT VEAL+DR V+ + CGS+ +AAICLHK +S  
Sbjct: 633  SRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGA 692

Query: 613  DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHL 672
            +QS CS CR  FGF RK+HNCYNCGL  C +CS++K + A+L PN GK  RVCDTCY  L
Sbjct: 693  EQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRVCDTCYVKL 752

Query: 673  QKITHSGRLLKQENQSPR----NLLNLQGSLSEEVKEEKGALTPSRG--QSFTSKQSRNV 726
             K+  S  +  + N  PR    N   L+ S   E++  K A+  +    +   SK ++  
Sbjct: 753  NKVAESS-INNRRNAMPRFPGENKDRLEKS---ELRLSKPAVPSNMDLIKQLDSKAAKQG 808

Query: 727  ERKPGECLESASSLSSGLQRWGQV-SCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKI 785
            ++     L   +   S LQ    V S  +  K       + P+ +    +S   P  R+ 
Sbjct: 809  KKADMFSLAHTTQAPSLLQLKDVVLSTAMDLKRTVPRPVITPSGVNSRSVS---PFSRRS 865

Query: 786  SLGSNFIPIAST--------VEKDLSESNKMLNEEVQRLR-------------------- 817
            S   +  PI +T        +   L ++N +LN+EV +LR                    
Sbjct: 866  SPPRSATPIPTTSGLAFSKSITDSLKKTNDLLNQEVLKLRSQVYYTSLISVVSIKLQNFS 925

Query: 818  --------------------------------DQAR--NLEKQCQIGNQKVQECQQKIEE 843
                                            ++AR   L ++C++   ++++  +K +E
Sbjct: 926  SILNFFSVMFESEEEIVGQILEKLDEERIEKKNEARVETLRQRCELQELELKKSAKKTQE 985

Query: 844  AWSLAREEAEKCKAAKEIIKALAVRL---------------------------------- 869
            A  LA EE+ K KAAKE+IK+L  +L                                  
Sbjct: 986  AMVLATEESAKSKAAKEVIKSLTAQLKDLAERLPPGAYDTDNIRPGNLRNGFVESNGIHH 1045

Query: 870  --------HTLSEKISAAKEAKEGVDANLPPKLD-----------------------TDK 898
                    HT +E IS +  A  G++++L  + +                       TD 
Sbjct: 1046 PDSNGEQGHTRAESISGSSLASLGLESSLMNRTERNSTGSYATNLYQQSRASVTSNGTDD 1105

Query: 899  HPEVKLPKDRKVDSLCSSPI--VFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGT 956
            + + +LP    +    +S +   F  +    +      D+ SGS   + V      Q   
Sbjct: 1106 YRDDRLPNSGSMIQATNSSVSDTFDGRNSGNF-----RDDESGSRSRNDVLAANSNQ--- 1157

Query: 957  KASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYG 1016
               + E+ EQYEPG+YIT   +  G + L+RVRFSRRRF E  AE WW EN+  VY++Y 
Sbjct: 1158 --VEAEWIEQYEPGVYITLVAMRDGTRDLRRVRFSRRRFGENQAETWWSENRDRVYERYN 1215

Query: 1017 I 1017
            +
Sbjct: 1216 V 1216


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/885 (41%), Positives = 523/885 (59%), Gaps = 73/885 (8%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S  KEK L+L+SV++++ GQRT+ FQ    P++   SFS+IY +G+RSLDLI
Sbjct: 64  DESTLIWVSNNKEKSLKLSSVSRVLSGQRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLI 123

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
           CKDKV+AE WF GL   IS  +                                      
Sbjct: 124 CKDKVEAEVWFAGLNVLISPGQHG------------------------------------ 147

Query: 122 ELSQVRSLCGSPSLSLSERCFSDGL-----SYSSDSFYSSESSSSQIQNLSNIITPSSPH 176
             SQ + + G  + +LS  C  D       +Y++DSF +  SS++  ++ S+     S  
Sbjct: 148 --SQHQHIDGIRNGALSFECGRDSSLSSSSAYTTDSFENKLSSANSAKDRSSGEFTYSER 205

Query: 177 METENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGA 236
            +  + M+ +   +D R   + +    +   G    +  +   DV +WGE +        
Sbjct: 206 TDVSD-MQVKGASSDIRISVSSALSTSSHGSG----DDSESFGDVYVWGEVMCDTTCRQG 260

Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
            D +        D L+PK LES VMLDV  ++ G KHAALVT++ EVF WGE   GRLGH
Sbjct: 261 SDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGH 320

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
                +  P+LVE LS  NV++++CGEF TCA+T +G++YTWG   H A L+G   + SH
Sbjct: 321 GAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSH 380

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
           W+P+++   L+G++VS V+CG WHTA++++SG+L+T+GDGTFGVLGHGN + +S PKEVE
Sbjct: 381 WIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVE 440

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           SL+GL+  SV+CG WHTAA+V++++   +SN   GKLFTWGD DK RLGH D   KL PT
Sbjct: 441 SLKGLRTISVSCGVWHTAAVVEVIM--AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPT 498

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           CV  L+D++F +A CG  LT+GLT  G ++T GS+V+GQLGNP    R   +VE KL   
Sbjct: 499 CVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGG 558

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  +  G+YHVAVLT  G VYTWGK ANG+LG GD  +R+TPTFVEALRDR V+ + CG
Sbjct: 559 GVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACG 618

Query: 597 SSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTP 656
           S  TAAIC HKS+S  +QS CS CR PFGF RK+HNCYNCGL  C +CS+KK + A+L+P
Sbjct: 619 SGFTAAICQHKSVSGMEQSQCSSCRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSP 678

Query: 657 NKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQ 716
           N GKP RVCD+CY  L K+  SG +   +N +PR    + G    +  + KG    S   
Sbjct: 679 NPGKPYRVCDSCYLKLSKVLDSG-IGHNKNNTPR----IPGDSKADKMDSKGNRVAS--- 730

Query: 717 SFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQM- 775
           + +S   +N++ K  +  +             +   P +F      K +        Q  
Sbjct: 731 ANSSDMIKNLDVKAAKQTK-------------KYDYPPQFPAILQLKDIPFIGAADQQPN 777

Query: 776 -STHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKV 834
            ST+S  L ++   ++   ++S     L ++N++L +EVQ+L+++  +L +Q +  +  +
Sbjct: 778 DSTYSSPLLRLPNLNSSSSLSSESFDILRDANELLKQEVQKLKEEVNSLRQQREQQDADL 837

Query: 835 QECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAA 879
           Q+ + K  EA +LA EEA K KAAK++IK+L  +L  ++E++  A
Sbjct: 838 QKSEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLKEMAERLPPA 882



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+Y+T  +L  G K LKRVRFSRRRF E  AE WW +N+  VY KY +
Sbjct: 1015 EWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYDKYNV 1070


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/836 (43%), Positives = 507/836 (60%), Gaps = 41/836 (4%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D L DV IWGEG   G +GG      S    ++D+L PK LESAV+LDVQNI+ G +HAA
Sbjct: 264  DALGDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFPKSLESAVVLDVQNIACGGRHAA 323

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            LVTK+GE+F WGE   GRLGH V+ DV  PKL+E LS  N++ V+CGE+ TCA+T SG++
Sbjct: 324  LVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDL 383

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG+  +   L+G     SHW+P+++   L+G+ VS ++CG WHTA+V+++GQLFT+GD
Sbjct: 384  YTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGD 443

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV-DRCKSNAIGGKLF 454
            GTFG LGHG+ ++VS P+EVESL+GL+    ACG WHTAA+V++MV +   SN   GKLF
Sbjct: 444  GTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 503

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            TWGD DKGRLGH D E KL+PT V  + V  +F Q +CG  LTV LT  G VYTMGS V+
Sbjct: 504  TWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVY 563

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            GQLG P+A  +    VE KL E FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+
Sbjct: 564  GQLGIPQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 623

Query: 574  QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
             +R TPT VEAL+D+ V+S+ CG++ TAAICLHK +S  DQS CS CRMPF F+RK+HNC
Sbjct: 624  DDRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRMPFNFKRKRHNC 683

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQ-------EN 686
            YNCGL FC +CS+KK + AS+ PN  KP RVCD C+N L+K   +              N
Sbjct: 684  YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTVETDSSSHSSVSRRGVAN 743

Query: 687  QSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESA--SSLSSGL 744
            Q P  L++    L    + +      S  +SF   +SR+ ++       S+  S + +G 
Sbjct: 744  QGPLELIDKDDKLDSRSRNQLARF--SSMESFKQVESRSSKKNKKLEFNSSRVSPIPNGG 801

Query: 745  QRWGQVSCPIRFK-THCHEKSVEPTPIPKTQMSTHSP------------LLRKISLGSNF 791
             +WG  +    F       K      +P +++ + +                  +LG   
Sbjct: 802  SQWGASNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLT 861

Query: 792  IPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREE 851
             P  + V  D   +N  L++EV +LR Q  NL ++ Q+   +++   +++++A ++A EE
Sbjct: 862  SP--NIVVDDAKRTNDSLSQEVIKLRSQVENLTRKAQLQEVELERTTKQLKDAIAIAGEE 919

Query: 852  AEKCKAAKEIIKALAVRLHTLSEK--ISAAKEAKEGVDANLPPKLDTDK-HPEVKLPKDR 908
              KCKAAKE+IK+L  +L  ++E+  + AA+  K      L     ++    +V      
Sbjct: 920  TAKCKAAKEVIKSLTAQLKDMAERLPVGAARTVKS---PTLTASFGSNPCSNDVSYASID 976

Query: 909  KVDSLCSSP---IVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKAS----KL 961
            +++   +SP   +  SN      G       S+G  + S+   T      TK S    + 
Sbjct: 977  RLNIQATSPEADLTGSNNHLHSNGSSTVSSRSTGHTKQSQSDSTNRNGSRTKDSESRNET 1036

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQ EPG+YIT T+LP G   LKRVRFSR+RF+EK AE+WW EN+  VY++Y +
Sbjct: 1037 EWVEQDEPGVYITLTSLPGGIIDLKRVRFSRKRFSEKQAEQWWAENRGRVYEQYNV 1092


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/829 (44%), Positives = 507/829 (61%), Gaps = 48/829 (5%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV IWGEG   G +GG      S +  ++D L+PK LE AV LDVQNIS G +HAALV
Sbjct: 66   LGDVFIWGEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGRHAALV 125

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            TK+GE++ WGE   GRLGH V+ DVS PKL++ LS +N++ V+CGE+ TCA+T SG++YT
Sbjct: 126  TKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYT 185

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG       L+G     SHW+P+ +   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+
Sbjct: 186  WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS 245

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTW 456
            FGVLGHG+ +++S P+EVESL+GL+    ACG WHTAA+V++M     S+    GK+FTW
Sbjct: 246  FGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTW 305

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD DKGRLGH D E KL+PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQL
Sbjct: 306  GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQL 365

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            GN +A       VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ ++
Sbjct: 366  GNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK 425

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNC 636
             TPT VEAL+D+QV SVVCG + TAAIC+HK +S  DQS CS CR PF  RRK+HNCYNC
Sbjct: 426  NTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNC 485

Query: 637  GLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQ 696
             L FC +CS+KK + ASL PN  KP RVCDTCY+ L K   +   +    +    +    
Sbjct: 486  ALVFCHSCSSKKSLKASLAPNTNKPYRVCDTCYSKLTKGPETD--MHSSAKRAATVPGFS 543

Query: 697  GSLSEEVKEEKGALTP--SRGQSFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSC 752
             ++ E+++    A     S  +SF    SR  ++       S   S + +G   W  ++ 
Sbjct: 544  DTIEEDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNI 603

Query: 753  PIRFK-THCHEKSVEPTPIPKTQMSTH--SPLLRKI----------SLGSNFIPIASTVE 799
               F       K      +P +++ +   SP+ R+           +LG    P    V 
Sbjct: 604  SRSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLTSP--RVVP 661

Query: 800  KDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAK 859
             D   +N  L++EV  LR Q  +L ++ Q+   +++   ++++EA S+A EE  KCKAAK
Sbjct: 662  NDGKPTNDALSQEVLNLRSQVESLTRKSQLLEVELERTTKQLKEAISIAGEETAKCKAAK 721

Query: 860  EIIKALAVRLHTLSEKI--SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSP 917
            E+IK+L  +L  ++E++   AAK  K      LPP       P + +P D  + S+ +  
Sbjct: 722  EVIKSLTAQLKGMAERLPGGAAKNTK------LPPL------PGISIPSD--ISSMATES 767

Query: 918  IV--FSNKLKSVYGRE-LCHDNSSGSVEDSKVARTEPQQKGTKAS------KLEYAEQYE 968
            +V   S+  + + G   L   N   SV + K +  E  + G++          E+ EQ E
Sbjct: 768  VVSPSSSGEQIINGHNGLLASNGPSSVRN-KTSHPEVGKNGSRPPDAESCHDAEWVEQDE 826

Query: 969  PGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            PG+YIT T LP G + LKRVRFSR+RF+E  AE+WW+EN+  VYQ+Y +
Sbjct: 827  PGVYITLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYQQYNV 875


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
            Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/1077 (36%), Positives = 591/1077 (54%), Gaps = 135/1077 (12%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYS  KEK LRL+SV+K+I GQRT  F+   +P++   SFS+IY NG+RSLDL+
Sbjct: 55   DENTLVWYSHNKEKCLRLSSVSKVIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLV 114

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKD+ + E WF  L + I+SCR                              L  L D  
Sbjct: 115  CKDQAEVEVWFSTLESLITSCR------------------------------LNFLNDG- 143

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
               Q   +  S  +++    + D  SY  D+     SS ++  N +   TP+S +    +
Sbjct: 144  ---QTDRVSFSEDVTI----YQDSTSY--DTTLDIASSITRSFNSAGYSTPNSLNSIRAD 194

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPL-----IERKDILKDVMIWGE---GVLGGDI 233
                 +N    R    ++ R+   +  S       ++  + L DV +WGE    VL    
Sbjct: 195  VGSDRVNM--LRASTGDNSRVSISSAPSSSSQSSGLDDIESLGDVYVWGEVWTEVL---- 248

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
                +GS +   ++ D L+PK LES V+LDVQ I+ G++H  L T++GEVF WGE   GR
Sbjct: 249  --PSEGSSNYLCSKTDFLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGR 306

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH  + D+  PKLVE L+  NV+ ++CGEF TC +T SG++Y WG  ++ A L+G    
Sbjct: 307  LGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTG 366

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
             SHWLP+++   L+G++V  VACG WH+A+  +SG+LFT+GDGTFG LGHG+ ++V+ PK
Sbjct: 367  VSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPK 426

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            EVE+L G +   VACG WH+AAIV+I   +  +NA+  KLFTWGD DK RLGH D E KL
Sbjct: 427  EVEALSGFRAMKVACGVWHSAAIVEIS-GQASTNAMSRKLFTWGDGDKNRLGHGDKEAKL 485

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
            +PTCV  LVD +F Q +CG  +TV L   G V+TMGS+ +GQLGNPKA  +   +V+ KL
Sbjct: 486  VPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKL 545

Query: 534  KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
              E V+ IS GS HVA LTS   VYTWG  ANG+LG G  ++++ PT V+AL+DR V+S+
Sbjct: 546  GNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSI 605

Query: 594  VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINAS 653
             CGS+ T  IC+HK +S  DQS CS CR PFGF RK+HNCYNCGL  C ACS++K++ A+
Sbjct: 606  SCGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAA 665

Query: 654  LTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPS 713
            L P  GKP RVCD+C+  L K   +G +    + + RN++  + S+  + K E+  + PS
Sbjct: 666  LAPTPGKPHRVCDSCFMKL-KAADTGVI---SSYNKRNVITRR-SIDIKDKLERPEIRPS 720

Query: 714  R------GQSFTSKQSRNV--ERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSV 765
            R       +    ++++NV  E KP + +         + +  QV   ++FK      + 
Sbjct: 721  RLATTSPAEPVKYQETKNVRNETKPADPMS--------MMKASQVPAMLQFKDMAFAGTF 772

Query: 766  EPTPIPKT------QMSTHSPLL-------RKISLGSNFIPIASTVEKD-LSESNKMLNE 811
               P          QM    P+        +     +   P+   V+ D L ++N++LN+
Sbjct: 773  GTVPTTVKSMTMGGQMQMGMPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQ 832

Query: 812  EVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHT 871
            ++ +L+ Q   L+++C+  ++++Q+ ++K ++A S+A EE+ +     + +K      H 
Sbjct: 833  DISKLQSQVNKLKQKCETQDEQLQKAERKAKQAASMASEESARRNTVLDFVK------HL 886

Query: 872  LSEK---ISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVY 928
             SE    IS     +  V A+  P    D    ++   +R +    S+ +    ++  + 
Sbjct: 887  DSEDILMISQPSILQLKVIADRVPGDVADNLKTLQSQSERFLAGQSSNLV----EITGLT 942

Query: 929  GRELCHDNSS--GSVEDS----------------------KVARTEPQQKGTKASK---- 960
            G ++ H  SS  GS+  S                      ++     +  G  A K    
Sbjct: 943  GHDIGHHRSSSTGSLPVSQDGSSGNASGSSIAMASDSPCHRIMENNLKAPGDFAPKYGTH 1002

Query: 961  --LEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
              ++  EQ+EPG+Y+T   L  G K  KRVRFS+RRF E+ AE WW ENQ  V++KY
Sbjct: 1003 GEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSKRRFAEQQAEEWWRENQERVFKKY 1059


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/859 (41%), Positives = 504/859 (58%), Gaps = 61/859 (7%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D L DV IWGE +    +    D + +   T+ D LLP+ LES V+LDV +I+ G +HAA
Sbjct: 234  DALGDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAA 293

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            LVT++GEVF WGE   GRLGH V  DV  P+LVE L+   V  V+CGEF TCA+T +GEI
Sbjct: 294  LVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEI 353

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG   H A L+G     SHW+P+++   L+G++V+ V CG WHTA+V+++GQLFT+GD
Sbjct: 354  YTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGD 413

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            GTFGVLGHG+ +NV+ P+EVESL GL+  + ACG WHTAA+V+++V +  S+   GKLFT
Sbjct: 414  GTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFT 473

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD DK RLGH D E +L PTCV  L+D++F + +CG  LTVGLT  G V+ MGS V+GQ
Sbjct: 474  WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQ 533

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LGNP A  +   +VE KL  E V+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD ++
Sbjct: 534  LGNPYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIED 593

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
            R+ P  VEAL+DR V+ + CG++ TAAICLHK +S  +QS CS CR  FGF RK+HNCYN
Sbjct: 594  RKAPILVEALKDRHVKYIACGANYTAAICLHKLVSGAEQSQCSSCRQAFGFTRKRHNCYN 653

Query: 636  CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
            CGL  C +CS++K   A+L PN GKP RVCD+C+  L K++ +     + N  PR     
Sbjct: 654  CGLVHCHSCSSRKATRAALAPNPGKPYRVCDSCFVKLNKVSDASN-HNRRNSVPRLSGEN 712

Query: 696  QGSLSE-EVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQV-S 751
            +  L + E++  K  L  +    +   +K ++  ++     L  +S   S LQ    V S
Sbjct: 713  KDRLDKAEIRLSKSTLPSNMDLIKQLDTKAAKQGKKADTFSLVRSSQAPSLLQLKDVVFS 772

Query: 752  CPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIAST--------VEKDLS 803
              I  +    +  + P+ +    +   SP  R+ S   +  P+ +T        V   L 
Sbjct: 773  SAIDLRAKVPKPVLTPSGVNSRSV---SPFSRRPSPPRSATPVPTTSGLSFSKSVTDSLR 829

Query: 804  ESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIK 863
            ++N++LN+EV +LR Q  +L+++C     ++Q+  +K++EA +LA EE+ K KAAK++IK
Sbjct: 830  KTNELLNQEVIKLRAQVESLKQRCDFQELELQKSAKKVQEAMALAAEESSKSKAAKDVIK 889

Query: 864  ALAVRLHTLSEKISAAKEAKEG-----------------VDANLPPKLDTDKHPEVKLPK 906
            +L  +L  ++E++       E                  VDAN      +D      L  
Sbjct: 890  SLTAQLKDMAERLPPGVSDSENMKPAYLTNGLEPNGIHYVDANGERHSRSDSISLTSLAS 949

Query: 907  DRKVDSLCSS-----PIVFSN-------------KLKSVYGRELCHDNSSG-------SV 941
                DS  S+        F +             +L +  G +  H+ S G       S+
Sbjct: 950  PTGNDSTLSNGAQGPAYSFRDSFPTNGRDDHPDARLSNGGGVQSSHNVSEGVDGKESRSL 1009

Query: 942  EDSK---VARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEK 998
            +D +    +R       +   + E+ EQYEPG+YIT   L  G + LKRVRFSRRRF E 
Sbjct: 1010 QDGENGIRSRDSALAASSNQVEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEH 1069

Query: 999  AAERWWEENQVVVYQKYGI 1017
             AE WW EN+  VY+KY +
Sbjct: 1070 QAETWWSENREKVYEKYNV 1088


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/869 (41%), Positives = 507/869 (58%), Gaps = 77/869 (8%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D L DV IWGE V    +    + + S    + D LLP+ LES ++LD+ +I+ G +HAA
Sbjct: 235  DALGDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIHHIACGVRHAA 294

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            LVT++GEVF WGE   GRLGH V  DV  P++VE L+  ++  V+CGEF TCA+T +GE+
Sbjct: 295  LVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTITGEL 354

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG   H A L+G     SHW+P+++   L+G++V+ V CG WHTA+V++ GQLFT+GD
Sbjct: 355  YTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGD 414

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            GTFG LGHG+ +N+S PKEVESL GL+  +VACG WHTAA+V+++V +  S+   GKLFT
Sbjct: 415  GTFGALGHGDRENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFT 474

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD DK RLGH D E +L PTCV  L+D+DF + +CG  +TVGLT  G+V++MGS V+GQ
Sbjct: 475  WGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQ 534

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LGNP A  +   +VE KL  E V+ +S G+YHV VLTS   VYTWGK ANG+LG GD ++
Sbjct: 535  LGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVED 594

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
            R+TPT VEAL+DR V+ + CGS+ TAAICLHK +S  +QS CS CR  FGF RK+HNCYN
Sbjct: 595  RKTPTLVEALKDRHVKYIACGSNYTAAICLHKWVSSAEQSQCSACRQAFGFTRKRHNCYN 654

Query: 636  CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
            CGL  C +CS++K + A+L PN GK  RVCD+CY  L K   +     ++N  PR    L
Sbjct: 655  CGLVHCHSCSSRKALRAALAPNPGKLYRVCDSCYTKLMKAAEAIN-NNRKNAMPR----L 709

Query: 696  QGSLSEEVKEEKGALTPSRGQSFT-SKQSRNVERKPGECLESASSLSSGLQRWGQVSCPI 754
             G   + + +    ++ S   +    KQ  N   K G+  ++ S     L R  Q    +
Sbjct: 710  SGENKDRIDKTDMKISKSVPSNLDLIKQLDNKAAKQGKKADTFS-----LVRSSQAPSLL 764

Query: 755  RFK-----THCHEKSVEPTPI---PKTQMSTHSPLLRKISLGSNFIPIAS--------TV 798
            + +     T    +   P P+         + SP  RK S   +  P+ +        ++
Sbjct: 765  QLRDVVLSTAVDLRRTAPKPVLTASGVSSRSVSPFSRKPSPPRSATPVPTASGLSFSKSI 824

Query: 799  EKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAA 858
               L ++N +LN EV +LR Q  +L ++C++  Q++Q+  +K  EA +LA EE+ K KAA
Sbjct: 825  TDSLKKTNDLLNHEVLKLRSQVESLRQKCELQEQELQKSLKKTREAMALAAEESGKSKAA 884

Query: 859  KEIIKALAVRLHTLSEKI-SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDR------KVD 911
            KE+IK L  +L  ++E++     +A++    +L   L+++    + +  +R         
Sbjct: 885  KEVIKLLTAQLKDMAERLPPGVYDAEKMRSLHLSNGLESNGGYHLSMNGERHSRSDSVSS 944

Query: 912  SLCSSPIVF-SNKLKSVYG-----RELCHDNSSGSVE--DSKVAR--------------- 948
              C+SP    +   +  YG     REL   N S   +  DS+ +R               
Sbjct: 945  YSCASPTASEAAAWQGSYGTTHSYRELSGTNDSAHQDRIDSRDSRLPNSGGAHPVSSSAS 1004

Query: 949  -------TEPQQKGTKASK-------------LEYAEQYEPGIYITFTTLPSGQKGLKRV 988
                   +E  Q G   SK              E+ EQYEPG+YIT   L  G + LKRV
Sbjct: 1005 VAAVGKDSESLQDGDNNSKAKTSPLVNATQVEAEWIEQYEPGVYITLVALRDGTRDLKRV 1064

Query: 989  RFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            RFSRRRF E  AE WW EN+  VY++Y +
Sbjct: 1065 RFSRRRFGEHQAENWWSENREKVYERYNV 1093



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 63/86 (73%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S + E+ L+L S+++II GQRT  F+   +P++   SFS+IY NG+RSLDLI
Sbjct: 46  DESSLIWISSKGERSLKLASISRIIPGQRTAVFERYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRT 87
           CKDKV+AE+W  GL+A I+S +  R+
Sbjct: 106 CKDKVEAEAWISGLKALIASGQGGRS 131


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/821 (42%), Positives = 496/821 (60%), Gaps = 70/821 (8%)

Query: 213  ERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            E  D+  ++ +WGEG+  G +   +D S      + DA LP+ + S V+LDVQ I+ G +
Sbjct: 79   EEGDVFGELWMWGEGIGDGGVTKKLDTSF-----RTDAFLPRAVRSLVVLDVQQIACGVR 133

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H ALVT++GEVF WGE   GRLGH V+ DV+ P+L++ L+   VQ V+CGE+ +CA+T+S
Sbjct: 134  HTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQS 193

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            G++YTWG   H   L+G   S SHW P+++   L+GVRVS VACG WHT +V+++GQLF+
Sbjct: 194  GDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFS 253

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS-NAIGG 451
            +GDGTFGVLGHG+ ++ S P+EVESL+GLK    ACGPWHTAA+V++M     + +++ G
Sbjct: 254  FGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSG 313

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            KLFTWGD DK RLGH D E+KL+PTCV  LVD +F Q +CG  LTV LT  G +YTMGS 
Sbjct: 314  KLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSV 373

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             +GQLG+P+A  R   V+  +L    ++ +S G+YHVA LTS G V TWGK ANG+LG G
Sbjct: 374  SYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHG 431

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS---ISVGDQSSCSQCRMPFGFRR 628
            D+++R+ PT VEALRD+QV+ V CGSS T+AICLHKS   +  G+ S CS CR PFGF R
Sbjct: 432  DAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGN-SMCSGCRQPFGFTR 490

Query: 629  KKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQS 688
            KKHNCYNCGL +C +CS+KK + AS  PN  K  RVCDTC+  + + + S    K+ +++
Sbjct: 491  KKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKMSRSSVSVTAPKENSET 550

Query: 689  PRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVER-KPGECLESASSLSSGLQRW 747
                L +Q                ++G  F     +  +R K  +     S + +GL +W
Sbjct: 551  --RFLKVQ----------------TKGDLFKQTDVKTTKRSKRPDSTSRVSPMPNGLLQW 592

Query: 748  GQVSCPIRFKTHCHEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIPIAS----TVEKD 801
            G V+ P  F             IP++++ +   SPL R+ S   +  PI +    T  K 
Sbjct: 593  GGVNAPAAFNAFLDAAK----SIPQSRVGSRAVSPLSRRPSPPRSATPIPTVGGLTSPKH 648

Query: 802  LSESNKMLNE----EVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKA 857
              E  K+ NE    E+ RL+ Q   L ++C+   +++    ++I++A+++A  E+ KCKA
Sbjct: 649  EVEGVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHSSKQIQDAFAVAGAESAKCKA 708

Query: 858  AKEIIKALAVRLHTLSEKISAAKEAKEGVDANLP-PKLDTDKHPEVKLPKDRKVDSLCSS 916
            AKE+I +L  +L  L+E++            + P P+  T  H  V          +C  
Sbjct: 709  AKEVIMSLTAQLKDLAERMPPGSYRTRPEPPSAPLPEDGTRSHGNV----------VCDV 758

Query: 917  PIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
            P   S+   S       HD + G   +S  + +  +         E+ EQ +PG+YIT T
Sbjct: 759  PARLSDVDTS-----RLHDQADGRASNSATSESGVE---------EWVEQDQPGVYITLT 804

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             LP G K LKRVRFSR+RF+EK AE WW+EN+  VY++Y +
Sbjct: 805  ALPGGGKDLKRVRFSRKRFSEKQAEIWWQENRHRVYEQYNV 845


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/1034 (37%), Positives = 576/1034 (55%), Gaps = 74/1034 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW+S  K K L L+SV++II GQRT  F+   +P++   SFS+IY NG+RSLDL+
Sbjct: 36   DETSLIWHSHSKVKHLVLSSVSRIIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLV 95

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKD+ + E WF  L   I+SCR+S +     ++  +   VS    Y     +   L+ A+
Sbjct: 96   CKDQAEVEVWFSTLETLITSCRKSYSVDGPSDRLSISDEVSH---YQDNAFHDTTLDIAS 152

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
             +++  +  G                YS+++  +S + +  + + +N++  S+       
Sbjct: 153  SITRTFNSAG----------------YSTNNSLNS-AKTDVVSDRANMLRASTD------ 189

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                      +R   + +    +   G   IE    L DV +WGE  +  D+  A +GS 
Sbjct: 190  ---------SSRLSISSAPSSSSQGSGQDDIES---LGDVYVWGE--VWTDVIPA-EGST 234

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +   ++ D L+PK LES V+LDVQ I+ G +H AL T++GEVF WGE   GRLGH  + D
Sbjct: 235  NYLCSKADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD 294

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            +S PKLVE L+  NV+ ++CGEF TCA+T SG++YTWG   +   L+G     SHWLP++
Sbjct: 295  ISRPKLVEALAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKR 354

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +   L+GV+V  V+CG WH+A+ ++SG++FT+GDGTFG LGHG  + V  PKEVE+L G 
Sbjct: 355  VSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGF 414

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +   VACG WH+AAIV+   +    N I  KL+TWG  DK +LGH D + +L+PTCV  L
Sbjct: 415  RTMKVACGLWHSAAIVE-SSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSL 473

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            +D+ F Q +CG  +T+ L+  G V+TMGS+ +GQLGNPK+  +    V+ +L  E V+ I
Sbjct: 474  IDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEI 533

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            S GS HVAVLTS   VYTWG  ANG+LG G  ++++ PT VEAL+DR V+S+ CGS+ T 
Sbjct: 534  SCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTT 593

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
             IC+HK +S  DQS CS CR PFGF RK+HNCYNCGL  C ACS++K++ A+L P  GKP
Sbjct: 594  CICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKP 653

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR-GQSFTS 720
             RVCD+C+  L+    S       +   RN +  + S+  + + E+  + PSR     T+
Sbjct: 654  HRVCDSCFMKLKAADTS----NNSSHGKRNAIARR-SVDSKDRSERPEIRPSRLATGSTA 708

Query: 721  KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHE---------KSVEPTPIP 771
            +  +  E KP         +S+   R  QV   + F               K +   P+P
Sbjct: 709  EPLKQAEIKPVRNEIKPDPMST--MRAPQVPSVLPFNNLAFGATFGGPASLKPMVMAPMP 766

Query: 772  KTQMSTHSPLLRKISLGSNFIPIASTVEKD-LSESNKMLNEEVQRLRDQARNLEKQCQIG 830
                 + SPL +K        P+    E D L  + ++LNE++ +L+ Q   L+++C   
Sbjct: 767  MAMPMSQSPLTKK-PCPPTTTPLCGKSETDNLKIAKQVLNEDIAKLQSQVNKLKQKCDAQ 825

Query: 831  NQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANL 890
             +++Q+ +++ E + S+A EE+ +     E I+ L   L ++++++ +          N 
Sbjct: 826  EEQLQKAERRAENSNSIAAEESSRRNGVLEFIRFLDNELKSIADRVPSDVVDNLKTLQNH 885

Query: 891  PPKLDTDK--HPEVKLPKDRKVDSLCSSPI-------VFSNKLKSVYGRELCHDNSSGSV 941
              +  T++   P       RK  S+ +  +         S+   S+     CH      +
Sbjct: 886  SERFLTEQGMRPLEVTGTHRKSASIGNFVMSQDGNAGTASSSTVSLASESPCHR----IM 941

Query: 942  EDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAE 1001
            E+S  A  +   K     +++  EQ+EPG+Y+T   L  G K  KRVRFS+RRF E+ AE
Sbjct: 942  ENSSRANGDLAPKLGTHGEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSKRRFAEQQAE 1001

Query: 1002 RWWEENQVVVYQKY 1015
             WW ENQ  V++KY
Sbjct: 1002 EWWRENQERVFRKY 1015


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 959

 Score =  639 bits (1649), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 359/876 (40%), Positives = 513/876 (58%), Gaps = 81/876 (9%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WGE +    +    D +V ++  + D LLPK LES ++LDV ++  G KHAALVTK
Sbjct: 36   DVYVWGEVICDNTVRVGPD-TVIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTK 94

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             GEVF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T SGE+YTWG
Sbjct: 95   NGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWG 154

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
               H   L+G     SHW+P+++   L+G +V+ V+CG WHTA+V++ GQLFT+GDGTFG
Sbjct: 155  DGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFG 214

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            VLGHGN ++ S P+EVESL GLK  +VACG WHTAA+V+++V +  S+   GKLFTWGD 
Sbjct: 215  VLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDG 274

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            DK RLGH D E KL PTCV  L+D+DF + +CG  LTVGLT  G+V +MG+ V+GQLGNP
Sbjct: 275  DKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNP 334

Query: 520  KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            ++  +   ++E  + E  V+ ++ GSYHVAVLT+   V+TWGK ANG+LG GD ++R+ P
Sbjct: 335  RSDGKLPCLIEDIMGEHVVQ-VACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIP 393

Query: 580  TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
            T VE+LRDR V  + CGS+ T+AIC HK +S  +QS C+ CR PFGF RK+HNC+NCGL 
Sbjct: 394  TLVESLRDRAVRHIACGSNFTSAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLV 453

Query: 640  FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL 699
             C+AC++ K++ A+L PN  KP RVCD+C+  L    +S  + K++   PR+     G  
Sbjct: 454  HCNACTSHKVLRAALAPNPAKPYRVCDSCFMKLNSAAYSSTINKKKEVVPRH----SGES 509

Query: 700  SEEVKEEKGALTPSR---GQSFTSKQSRNVERKPGECLESASSLSSGLQ-RWGQVSCPIR 755
            + + K  + A+ PS     +S  SK ++  ++           +SS LQ R   +S  I 
Sbjct: 510  NHDAKLAR-AIVPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMSSLLQLRDITLSGGID 568

Query: 756  FKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIP--------IASTVEKDLSESNK 807
                   ++V  +          SP  RK S   +  P        IA T    L+++N+
Sbjct: 569  LNKSV-PRAVRTSVRSLNSSRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNE 627

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
            ML++EV+RLR Q  NL ++C++   ++Q+  +K++EA S+  EE+ K KAAKE+IK+L  
Sbjct: 628  MLSQEVERLRAQVDNLRRRCELQELELQKSAKKVQEAMSMVSEESAKSKAAKEVIKSLTS 687

Query: 868  RLHTLSEKI---SAAKEAKEGVDANLPPKLDTDKHPEVKL-----PKDRKVDSLCSSPIV 919
            +L  ++E++     A +  E   A++P  ++        +     P++  V +L S+P +
Sbjct: 688  QLKDMAERLPPDQGAYDGSEAKQAHVPNGIEMYASIYTSMNGIHQPRNESVSAL-STPGL 746

Query: 920  FSNKLKSVYGRELCHDNSSGSVEDSKV-ARTE----------PQQKGTKAS--------- 959
               +     G    H +     E+S+V A T           P ++G  +S         
Sbjct: 747  HIGRSSHPNGISNHHQSPGSITENSEVSAHTHRVSGPPDVENPNRRGHSSSDEMLSASSR 806

Query: 960  --------------------------------KLEYAEQYEPGIYITFTTLPSGQKGLKR 987
                                            + E+ EQYEPG+YIT TTL  G + LKR
Sbjct: 807  ADDSSSRDARSLLNGEDGYKSRSAVSLPSNQVQAEWIEQYEPGVYITLTTLRDGTRDLKR 866

Query: 988  VRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNL 1023
            VRFSRRRF E  AE WW EN+  VY+KY +++ S++
Sbjct: 867  VRFSRRRFGEHQAESWWNENRDKVYEKYNVDDPSSV 902


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica Group]
          Length = 917

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 352/873 (40%), Positives = 497/873 (56%), Gaps = 76/873 (8%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D L DV +WGE      +    D ++ ++  + D LLPK LES ++LDV ++  G +HAA
Sbjct: 32   DSLGDVYVWGEVFCENSVRVGSD-TIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAA 90

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            LVT+ G+VF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+
Sbjct: 91   LVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGEL 150

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG   H   L+G      HW+P+++   LDG+ V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 151  YTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G+FGVLGHGNL ++S PKEVESL GLK  +VACG WHTAAIV+++V    S+   GKLFT
Sbjct: 211  GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFT 270

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTV LT  GKV +MG++V+GQ
Sbjct: 271  WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LGNP +  R   +VE ++  E V  ++ GSYHVAVLT    V+TWGK ANG+LG GD ++
Sbjct: 331  LGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIED 390

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
            R+ PT VEAL+DR V  + CG++ TAAICLHK +S  DQS CS C+ PFGF RK+HNCYN
Sbjct: 391  RKVPTQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYN 450

Query: 636  CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
            CGL  C+AC+++K + A+L PN GKP RVCD+C+  L+    S    K+++     + +L
Sbjct: 451  CGLVHCNACTSRKALRAALAPNPGKPYRVCDSCFLKLKNALDSDSFNKRKDI----VSHL 506

Query: 696  QGSLSEEVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
             G  + + K  K  L+ +    +S  SK +R  ++           +SS LQ        
Sbjct: 507  AGESNGDTKASKTILSSNMDIIRSLDSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSG 566

Query: 754  IRFKTHCHEKSVEPTPIPKTQMS-THSPLLRKISLGSNFIPIAST--------VEKDLSE 804
                     ++V  + +     S   SP  RK S   +  P+ +T           +L++
Sbjct: 567  SADMNRSVPRAVRTSAVRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAK 626

Query: 805  SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKA 864
            +N++LN+E+ RL  Q  NL  +C+    ++ +  +K++EA +L  EE+ K KAAKE+IK+
Sbjct: 627  TNELLNQEIDRLHAQVDNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKS 686

Query: 865  LAVRLHTLSEKISAAK------EAK-----EGVDANLP--PKLDTDKHPEVKLPKDRKVD 911
            L  +L  ++E+I   +      EAK      G+D+++     ++    P+ +L       
Sbjct: 687  LTAQLKDMAERIPPEQGTYDVSEAKPVHVPNGIDSHIAIYSSINVAHQPQNELLNASNAQ 746

Query: 912  SLCSSPIVFSNKLKSVY---------------------------GRELCHDNSSGSV--- 941
            SL S   +  N + S +                                H NS   +   
Sbjct: 747  SLNSGRSLHPNGISSQHRLLGNATEASEGSAQSHRITSPCKLDVPHRRAHSNSDDMLTAS 806

Query: 942  -----------------EDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKG 984
                             ED    R       +   + E+ EQYEPG+YIT TTL  G + 
Sbjct: 807  HRGDDNVSIDAMSLQNGEDGYKPRGTVSSISSSQVQAEWIEQYEPGVYITLTTLLDGTRD 866

Query: 985  LKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            LKRVRFSRRRF E  AE+WW EN+  VY++Y +
Sbjct: 867  LKRVRFSRRRFGEHQAEKWWNENREKVYERYNV 899


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 352/873 (40%), Positives = 497/873 (56%), Gaps = 76/873 (8%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D L DV +WGE      +    D ++ ++  + D LLPK LES ++LDV ++  G +HAA
Sbjct: 109  DSLGDVYVWGEVFCENSVRVGSD-TIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAA 167

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            LVT+ G+VF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+
Sbjct: 168  LVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGEL 227

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG   H   L+G      HW+P+++   LDG+ V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 228  YTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGD 287

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G+FGVLGHGNL ++S PKEVESL GLK  +VACG WHTAAIV+++V    S+   GKLFT
Sbjct: 288  GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFT 347

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTV LT  GKV +MG++V+GQ
Sbjct: 348  WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 407

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LGNP +  R   +VE ++  E V  ++ GSYHVAVLT    V+TWGK ANG+LG GD ++
Sbjct: 408  LGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIED 467

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
            R+ PT VEAL+DR V  + CG++ TAAICLHK +S  DQS CS C+ PFGF RK+HNCYN
Sbjct: 468  RKVPTQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYN 527

Query: 636  CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
            CGL  C+AC+++K + A+L PN GKP RVCD+C+  L+  + S    K+++     + +L
Sbjct: 528  CGLVHCNACTSRKALRAALAPNPGKPYRVCDSCFLKLKNASDSDSFNKRKDI----VSHL 583

Query: 696  QGSLSEEVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
             G  + + K  K  L+ +    +S  SK +R  ++           +SS LQ        
Sbjct: 584  AGESNGDTKASKTILSSNMDIIRSLDSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSG 643

Query: 754  IRFKTHCHEKSVEPTPIPKTQMS-THSPLLRKISLGSNFIPIAST--------VEKDLSE 804
                     ++V  + +     S   SP  RK S   +  P+ +T           +L++
Sbjct: 644  SADMNRSVPRAVRTSAVRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAK 703

Query: 805  SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKA 864
            +N++LN+E+ RL  Q  NL  +C+    ++ +  +K++EA +L  EE+ K KAAKE+IK+
Sbjct: 704  TNELLNQEIDRLHAQVDNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKS 763

Query: 865  LAVRLHTLSEKISAAK------EAK-----EGVDANLP--PKLDTDKHPEVKLPKDRKVD 911
            L  +L  ++E+I   +      EAK      G+D+++     ++    P  +L       
Sbjct: 764  LTAQLKDMAERIPPEQGTYDVSEAKPVHVPNGIDSHIAIYSSINVAHQPRNELLNASNAQ 823

Query: 912  SLCSSPIVFSNKLKSVY---------------------------GRELCHDNSSGSV--- 941
            SL S   +  N + S +                                H NS   +   
Sbjct: 824  SLNSGRSLHPNGISSQHRLLGNATEASEGSAQSHRITSPCKLDVPHRRAHSNSDDMLTAS 883

Query: 942  -----------------EDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKG 984
                             ED    R       +   + E+ EQYEPG+YIT TTL  G + 
Sbjct: 884  HRGDDNVSIDAMSLQNGEDGYKPRGTVSSISSSQVQAEWIEQYEPGVYITLTTLLDGTRD 943

Query: 985  LKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            LKRVRFSRRRF E  AE+WW EN+  VY++Y +
Sbjct: 944  LKRVRFSRRRFGEHQAEKWWNENREKVYERYNV 976


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 361/883 (40%), Positives = 504/883 (57%), Gaps = 109/883 (12%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WGE +    +    D +V ++  + D L PK LES ++LD  ++  G KH+ALVTK
Sbjct: 36   DVYVWGEVICDNSVRTGSD-TVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTK 94

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             GEVF WGE   GRLGH    D   P+L+E L+  NV  V+CGEF TCA+T +GE+YTWG
Sbjct: 95   NGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWG 154

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
               H   L+G  +  SHW+P+++   L+G+ V+ V+CG WHTA+++T GQLFT+GDGTFG
Sbjct: 155  DGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFG 214

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            VLGHGN +++S PKEVESL GLK  SVACG WHTAAIV+++V +  S+   GKLFTWGD 
Sbjct: 215  VLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDG 274

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV +MG+ V+GQLGNP
Sbjct: 275  DKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNP 334

Query: 520  KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            ++  +   +VE  + E  V+ ++ GSYHVAVLT    V+TWGK ANG+LG GD ++R+ P
Sbjct: 335  RSDGKIPCLVEEIVGENVVQ-VACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIP 393

Query: 580  TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
            T VEALRDR V  + CG++ TAAIC HK +S  +QS C+ CR PFGF RK+HNC+NCGL 
Sbjct: 394  TLVEALRDRSVRHIACGANFTAAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLV 453

Query: 640  FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL 699
             C+AC+++K + A+L PN  KP RVCD+C+  L     S  + K++    R   N  G L
Sbjct: 454  HCNACTSRKAVRAALAPNPAKPYRVCDSCFLKLNNAVDSSAISKKKENVLRE-SNSDGRL 512

Query: 700  SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTH 759
            ++       A+ PS      S  S+    K G+  ++ S L     R  Q++  ++ +  
Sbjct: 513  TK-------AIIPSNLDMIRSLDSKAA--KQGKKTDALSFL-----RTPQMNSLLQLRDI 558

Query: 760  CHEKSVEPT-PIPKTQMSTH----------SPLLRKISLGSNFIPIAST--------VEK 800
                 ++   P+P+   +T           SP  RK S   +  P+ +T           
Sbjct: 559  ALSGGLDLNRPVPRAVRTTAVRSVNTSRAVSPFSRKPSPPRSTTPVPTTHGLSIGKGAAD 618

Query: 801  DLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKE 860
            +L+++N+MLN+EV+RLR Q  NL  +C++   ++Q+  +K++EA +L  EE+ K KAAKE
Sbjct: 619  NLAKTNEMLNQEVERLRAQVDNLRHRCEVQELELQKSAKKVQEAMTLVAEESSKSKAAKE 678

Query: 861  IIKALAVRLHTLSEKISAAKEAKEG--------------------------------VDA 888
            +IK+L  +L  ++E++   + A +G                                + A
Sbjct: 679  VIKSLTAQLKDMAERLPPDQGAYDGNESKQMHFPNGTELHAAIYSSTNGIHQLQNESISA 738

Query: 889  NLPPKLDTDK-------------------HPEVKLPKDRKVDSLCSSP--IVFSNKLKSV 927
               P L+T +                   H EV     R      SSP     SN+   +
Sbjct: 739  LNTPSLNTGRSLHANGISSQHKSLGSISEHSEVSTHSHR-----VSSPHDTELSNRRARI 793

Query: 928  YGRELCHDNSSGSVEDSKVARTEPQQKGTKASK-------------LEYAEQYEPGIYIT 974
               EL   ++SG  +DS        Q G    K              E+ EQYEPG+YIT
Sbjct: 794  SSDELF--SASGKSDDSNNRDARSLQNGEDGYKPRGTVSLSSNQVQAEWIEQYEPGVYIT 851

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             TTL  G + LKRVRFSRRRF E  AE WW EN+  VY++Y +
Sbjct: 852  LTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYERYNV 894


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  637 bits (1643), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 369/851 (43%), Positives = 516/851 (60%), Gaps = 64/851 (7%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            + L DV +WGEGV  G +GG      +     +DA LPK LESA++LDVQ ++ G KHAA
Sbjct: 263  EALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVACGGKHAA 322

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            LVTK+GEVF WGE   GRLGH V+ DVS P+LVE L+    + V+CGE+  CA+T SG++
Sbjct: 323  LVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDL 382

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YTWG   H   L+G     SHW+P+++   L+ VRV+ +ACG WHTA+V+T+GQLFT+GD
Sbjct: 383  YTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGD 442

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLF 454
            GTFGVLGH + Q+   P+EVESL+GL+    ACG WHTAA+V++MV    +++   GKLF
Sbjct: 443  GTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLF 502

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
            TWGD DKGRLGH D E++L+PTCV  LVD +F + +CG  LTV LT  G+V+TMGS++ G
Sbjct: 503  TWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFG 562

Query: 515  QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
            QLG+P+A  +   +VEG+L + +V+ I+ G++HVA +T    VYTWGK ANG+LG GD +
Sbjct: 563  QLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGDQE 622

Query: 575  ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCY 634
            +R TPT VEAL+++QV+S+ CG++ TAA+CLHK +S  DQ++CS CR PF F RK+HNCY
Sbjct: 623  DRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQNACSGCRQPFSFTRKRHNCY 682

Query: 635  NCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITH----SGRLLKQENQSPR 690
            NCGL FC ACS+KK + ASL PN GKP RVCD C   L+K +     +G  L +     R
Sbjct: 683  NCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRKASEGGVGAGASLSKRGAPSR 742

Query: 691  N--LLNLQGSLSEEVK----EEKGALTPSRGQSFTSKQSRNVERKPGECLESASSL---- 740
            N  +   +GS   E +    +   A  P     F       +  K G+  E++SS     
Sbjct: 743  NRGMEVKEGSGKGEFRVPRPQAPNAGRPPITLEFGKAGEGKLGMKRGKKPENSSSRVSPV 802

Query: 741  ---SSGLQRWGQVSCPIRFKTHCHEKSVE-PTPIPKTQMSTH------SPLLRKISL--- 787
               +SG   WG VS P  F     + S+  P  I  + +S        SPL R+ S    
Sbjct: 803  PNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPLAISSSVVSGRAVSRAVSPLSRRTSPPRS 862

Query: 788  ------GSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKI 841
                  GS  + I  TV +DL ++N  L++E  +LR Q  +L +Q Q   +++Q   Q++
Sbjct: 863  TTPTPTGSG-LAIPKTVVEDLKKTNDTLSDENIQLRSQVESLARQLQNYEKEIQRSAQQL 921

Query: 842  EEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKIS------AAKEAKEGVDANLPPKLD 895
            + A +LA EEA K +AAKE+IK+L  +L  ++EK+       +      G +A++   L 
Sbjct: 922  QNAIALATEEAAKSRAAKEVIKSLTSQLKEMAEKLPLGGFRLSHSRPHAGTEADIGSTLG 981

Query: 896  TDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKG 955
                        R V S        + +L  V   E  +D +  + E  + + T    + 
Sbjct: 982  ------------RVVGS-----GRMATRLAEVDTNE--YDTAQRNDEGIRASGTSVSSEN 1022

Query: 956  TKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             +  + E+ EQ EPG+YIT T L  G K LKRVRFSR+RF+E+ AE+WW EN+V V+++Y
Sbjct: 1023 GREPETEWVEQDEPGVYITLTALLGGGKDLKRVRFSRKRFSEREAEQWWAENRVRVHEQY 1082

Query: 1016 ----GIEEYSN 1022
                GI+  SN
Sbjct: 1083 NVRGGIDRGSN 1093



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 72/105 (68%), Gaps = 6/105 (5%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIWYSG +EK+L L++V++II GQRT  F   P+P+++ QSFS+I+AN ERSLDL 
Sbjct: 46  DENALIWYSGGEEKRLWLSTVSRIITGQRTPVFLRYPRPEKECQSFSLIHANEERSLDL- 104

Query: 62  CKDKVQAESWFLGLRAAISSCR-RSRTFSCLREKRGVQSCVSSPA 105
             DK +AE WF+GL+A+++  + R      LR    V++   SPA
Sbjct: 105 --DKDEAEVWFVGLKASVAGAQLRKSKLHTLRHDGSVENI--SPA 145


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 348/821 (42%), Positives = 496/821 (60%), Gaps = 70/821 (8%)

Query: 213  ERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            E  D+  ++ +WGEG+  G     +D S      + DA LP+ + S V+LDVQ I+ G +
Sbjct: 79   EEGDVFGELWMWGEGIGDGGGTKKLDTSF-----RTDAFLPRAVRSLVVLDVQQIACGVR 133

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            HAALVT++GEVF WGE   GRLGH V+ DV+ P+L++ L+   VQ V+CGE+ +CA+T+S
Sbjct: 134  HAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQS 193

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            G++YTWG   H   L+G   + SHW P+++   L+GVRVS VACG WHT +V+++GQLF+
Sbjct: 194  GDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFS 253

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS-NAIGG 451
            +GDGTFGVLGHG+ ++ S P+EVESL+GLK    ACGPWHTAA+V++M     + +++ G
Sbjct: 254  FGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSG 313

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            KLFTWGD DK RLGH D E+KL+PTCV  LVD +F Q +CG  LTV LT  G +YTMGS 
Sbjct: 314  KLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSV 373

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             +GQLG+P+A  R   V+  +L    ++ +S G+YHVA LTS G V TWGK ANG+LG G
Sbjct: 374  SYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHG 431

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS---ISVGDQSSCSQCRMPFGFRR 628
            D+++R+ P+ VEALRD+QV+ V CGSS T+AICLHKS   +  G+ S CS CR PFGF R
Sbjct: 432  DAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGN-SMCSGCRQPFGFTR 490

Query: 629  KKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQS 688
            KKHNCYNCGL +C +CS+KK + AS  PN  K  RVCDTC+  + + + S    K+ +++
Sbjct: 491  KKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKMSRSSVSVTAPKENSET 550

Query: 689  PRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVER-KPGECLESASSLSSGLQRW 747
                L +Q                ++G  F     +  +R K  +     S + +GL +W
Sbjct: 551  --RFLKVQ----------------TKGDLFKQTDVKTTKRSKRPDSTSRVSPMPNGLLQW 592

Query: 748  GQVSCPIRFKTHCHEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIPIAS----TVEKD 801
            G V+ P  F             IP++++ +   SPL R+ S   +  PI +    T  K 
Sbjct: 593  GGVNAPAAFNAFLDAAKS----IPQSRVGSRAVSPLSRRPSPPRSATPIPTVGGLTSPKH 648

Query: 802  LSESNKMLNE----EVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKA 857
              E  K+ NE    E+ RL+ Q   L ++C+   +++    ++I++A+++A  E+ KCKA
Sbjct: 649  EVEEVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHSSKQIQDAFAVAGAESAKCKA 708

Query: 858  AKEIIKALAVRLHTLSEKISAAKEAKEGVDANLP-PKLDTDKHPEVKLPKDRKVDSLCSS 916
            AKE+I +L  +L  L+E++            + P P+  T  H  V          +C  
Sbjct: 709  AKEVIMSLTAQLKDLAERMPPGSYRTRPEPPSAPLPEDGTRSHGNV----------VCDV 758

Query: 917  PIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFT 976
            P   S+   S       HD + G   +S  + +  +         E+ EQ +PG+YIT T
Sbjct: 759  PARLSDVDTS-----RLHDQADGRASNSATSESGVE---------EWVEQDQPGVYITLT 804

Query: 977  TLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             LP G K LKRVRFSR+RF+EK AE WW+EN+  VY++Y +
Sbjct: 805  ALPGGGKDLKRVRFSRKRFSEKQAEIWWQENRHRVYEQYNV 845


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 1009

 Score =  630 bits (1625), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 387/1039 (37%), Positives = 578/1039 (55%), Gaps = 95/1039 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYS  K K L L+SV++II GQRT  F+   +P++   SFS+IY NG+RSLDL+
Sbjct: 36   DETSLVWYSHSKVKYLVLSSVSRIIPGQRTAVFRRFLRPEKDYLSFSLIYKNGQRSLDLV 95

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKD+ + E W                FS L     + SC  S ++               
Sbjct: 96   CKDQAEVEVW----------------FSTLEAL--ITSCRKSYSA--------------- 122

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
                       PS  LS    SD +S+  D+F+  +++     +++     +   + ++ 
Sbjct: 123  ---------DGPSDRLS---VSDEVSHYQDTFH--DTTLDIASSITRTFNSAKTDVVSDR 168

Query: 182  FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                  +   +R   + +    +   G   IE    L DV +WGE  +  D+  A +GS 
Sbjct: 169  ANMLRASTDSSRLSISSAPSSSSQGSGQDDIES---LGDVYVWGE--VWTDMIPA-EGSA 222

Query: 242  SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +   ++ D L+PK LES V+LDVQ I+ G +H AL T++GEVF WGE   GRLGH  + D
Sbjct: 223  NYLCSKADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDAD 282

Query: 302  VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            +S PKLVE L+  NV+ V+CGEF TCA+T SG++YTWG   + A L+G     SHWLP++
Sbjct: 283  ISRPKLVEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKR 342

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +   L+GV+V  V+CG WH+A+ ++SG++FT+GDGTFG LGHGN   V+ PKEVE+L G 
Sbjct: 343  VSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGF 402

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +   VACG WH+AAIV+   ++   N I  KLFTWG  DK  LGH D + +L+PTCV  L
Sbjct: 403  RTIKVACGLWHSAAIVET-TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSL 461

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
            +D++F Q +CG  +T+ L+  G V+TMGS+ +GQLGNPK+  +  T V+ +L  E V+ I
Sbjct: 462  IDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEI 521

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            S GS HVAVLTS   VYTWG  ANG+LG G  ++++ PT VEAL+DR V+S+ CGS+ T 
Sbjct: 522  SCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTT 581

Query: 602  AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
             IC+HK +S  DQS CS CR PFGF RK+HNCYNCGL  C ACS+KK++ A+L P  GKP
Sbjct: 582  CICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNCGLVHCHACSSKKVLKAALAPTPGKP 641

Query: 662  SRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS- 720
             RVCD+C+  L+    S       + S RN +  + S+  + + E+  +  SR  + ++ 
Sbjct: 642  HRVCDSCFMKLKAAETS----SNSSHSKRNAIARR-SVDSKDRSERPEIRSSRLATGSTA 696

Query: 721  --------KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPK 772
                    K  RN E KP       +     +  +  ++    F      K +   P+P 
Sbjct: 697  EPLKQAELKAVRN-EIKPDPMSTMRAPQVPSMLPFNNLAFGATFGGPASLKPMTMAPMPM 755

Query: 773  TQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQ 832
                + +PL +K +  +       +   +L  + ++LNE++ +L+ Q   L+++C    +
Sbjct: 756  AMPMSPAPLTKKPTPAAATPLCGKSDTDNLKMAKQVLNEDISKLQSQVNKLKQKCDAQEE 815

Query: 833  KVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDA--NL 890
            ++Q+ +++ E + S A EE+ +     E I+ L   L ++++++ +  +A +G+ A  N 
Sbjct: 816  QLQKAERRAEHSASTAAEESSRRNGVLEFIRFLDNELKSIADRVPS--DAADGLKALQNH 873

Query: 891  PPKLDTDK--HPEVKLPKDRKVDSLCSSPIVFSNK---------LKSVYGRELCH---DN 936
              +  T++   P       RK  S+ +  +V S             S+     CH   +N
Sbjct: 874  SERFLTEQGVRPLEATGMHRKCASIGN--LVMSQDGSAGNASSSAASLASESPCHRIMEN 931

Query: 937  SSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFT 996
            SS +  D       P+  GT   +++  EQ+EPG+Y+T   L  G K  KRVRFS+RRF 
Sbjct: 932  SSRANGD-----LAPKLGGTHG-EVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSKRRFA 985

Query: 997  EKAAERWWEENQVVVYQKY 1015
            E+ AE WW ENQ  V++KY
Sbjct: 986  EQQAEEWWRENQERVFRKY 1004


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 343/721 (47%), Positives = 466/721 (64%), Gaps = 29/721 (4%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW+SG++EKQLRL+ V++II GQRT  FQ  P+P+++ QSFS+I  + +RSLD+I
Sbjct: 52  DESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQSFSLI--SHDRSLDII 109

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRG--VQSCVSSPASYIRRKH------- 112
           CKDK +AE WF GL+  I+   RS       E R   + S  +SP +Y RR         
Sbjct: 110 CKDKDEAEVWFAGLKTLIT---RSHQRKWRTESRSDMLSSGTTSPRTYTRRSSPLSSPFS 166

Query: 113 -NLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSS--DSFYSSESSSSQIQNLSNI 169
            N  + +D  E  ++RS  GSP     E+ FSD +SY++    F+ S+S++  + ++S  
Sbjct: 167 SNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVSYAAPPKPFFPSDSNAGSVHSVS-- 224

Query: 170 ITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVL 229
               S   +  N     +     R         V+ +      +  D L DV IWGEG  
Sbjct: 225 ----SGQSDNTNLHSRGIPMDAFR---VSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTG 277

Query: 230 GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
            G +GG      + +   +D L+PK LE AV LDVQNIS G +HA LVTK+GE++ WGE 
Sbjct: 278 EGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEE 337

Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
             GRLGH V+ DV  PKL++ L+ +N++ V+CGE+ TCA+T SG++YTWG+    + L+G
Sbjct: 338 SGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLG 397

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                SHW+P+++   L+G+ VS ++CG WHTAIV+++GQLFT+GDG+FGVLGHG+ Q++
Sbjct: 398 HGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL 457

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVD 468
           S P+EVESL+GL+    ACG WHTAA+V++MV    S+    GK+FTWGD DKGRLGH D
Sbjct: 458 SVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGD 517

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
            + +L+PTCV  LV+ +F Q +CG  +TV LT  G VYTMGS V+GQLGNP+A       
Sbjct: 518 KDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVR 577

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
           VEGKL + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEAL+D+
Sbjct: 578 VEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDK 637

Query: 589 QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
           QV +VVCG + TAAIC+HK +S  DQS CS CR+PF  RRK+HNCYNC L FC ACS+KK
Sbjct: 638 QVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNCYNCALVFCHACSSKK 697

Query: 649 IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKG 708
            + ASL PN  KP RVCD+CY+ L K   + R    +  S   +     S+ EE++ +  
Sbjct: 698 SLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGSV--IQGFNDSVDEELETKSN 755

Query: 709 A 709
           A
Sbjct: 756 A 756


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 393/1051 (37%), Positives = 585/1051 (55%), Gaps = 102/1051 (9%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIWYS  +E+ L+L+SV++II GQRT  F+   +P++   SFS++Y NGERSLDL+
Sbjct: 46   DETTLIWYSHGEERNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLV 105

Query: 62   CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
             +  +  E W  GL+A IS+   R  RT S + + R     +S    YI    N+ L ++
Sbjct: 106  SEMGLFTEVWLAGLQALISTGQHRNRRTRSDIPDVR-----ISFQHQYIYAYVNIYLQKN 160

Query: 120  ATELSQVRSLC----GSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSP 175
             T +  +  +            + R F   L ++S S     SS       S++   SS 
Sbjct: 161  GTFICYIYIMLFQFHDGGDFIQNGRPFGVNLDFAS-SIARGRSSVDLSSRDSSLNWASSD 219

Query: 176  HMETENFMKWELNYAD-TRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIG 234
                   M+   +  D  R   + +    +   G   IE    L DV +WGE   G    
Sbjct: 220  AGSERTNMQLRTSGVDGFRISVSSTPSCSSQGSGPDDIES---LGDVYVWGEIACG---- 272

Query: 235  GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
                                         V++++L       VT++GEVF WGE   GRL
Sbjct: 273  -----------------------------VRHVAL-------VTRQGEVFTWGEESGGRL 296

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            GH ++ D S P LVE L+  NV  V+CGE+ TCA++ SG+++TWG   H A L+G     
Sbjct: 297  GHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEV 356

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            SHW+P+++   L+G++V  VACG WH+A+ +++G+LFT+GDGTFGVLGHG+ ++V  P+E
Sbjct: 357  SHWIPKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPRE 416

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            V+ L GLK   VACG WHTAAI+++M  +  +N    KLFTWGD DK RLGH   E  LL
Sbjct: 417  VQILSGLKTIKVACGVWHTAAIIEVM-SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLL 475

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            PTCV+ L+D++F Q +CG  +TV LT  G V+TMG   +GQLGNP +  R   +V+ KL 
Sbjct: 476  PTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLV 535

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             EFV+ IS G+YHVAVLTS   V+TWG+ ANG+LG GD+++R +PTFVEAL+DR V+S+ 
Sbjct: 536  GEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSIS 595

Query: 595  CGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASL 654
            CGS+ TA+IC+HK +S  DQS CS CR  FGF RK+HNCYNCGL  C ACS+KK + A+L
Sbjct: 596  CGSNFTASICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAAL 655

Query: 655  TPNKGKPSRVCDTCYNHLQKITHSG--RLLKQENQSPRNLLNLQ-GSLSEEVKEEKGALT 711
             P  GKP RVCD CY  L K   +G   +  ++N  PR  ++    S   EV+  +  ++
Sbjct: 656  APTPGKPHRVCDPCYAKL-KAAEAGDASIFNRKNTVPRRSIDATIRSDRGEVRSARILMS 714

Query: 712  PSRGQSFTSKQSRNVER-KPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPI 770
            P     F  K +R   R  P   ++S    S G      ++ P        + +++P   
Sbjct: 715  PGPINYFEFKPARLGPRPDPSPMIQS----SQGPSLLKDIAFPSSLS--ALQNALKPVIT 768

Query: 771  PKTQMSTH-----------SPLLRKISLGSNFIPIAS-TVEKDLSESNKMLNEEVQRLRD 818
               Q +             SP  R+ S   +  P+ S +V   L ++N++LN+EV +L++
Sbjct: 769  ASPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVIDSLKKTNELLNQEVTKLQN 828

Query: 819  QARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVR--LHTLSEKI 876
            Q R+L+++ +  + ++Q+ ++  +EA  LA EE+ KC  AKE++K++  +  L +  E  
Sbjct: 829  QVRSLKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITTQDYLESAHEST 888

Query: 877  SAAKEAKEGVDANLPPKL-DTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHD 935
            +  KE    ++  LPP++ D++    ++   +  +++  +    FS+ L +    +L  D
Sbjct: 889  NLLKE----MEKQLPPEVYDSETFKSMQTQIEAFLNTSGTQAAEFSSSLPA----DLESD 940

Query: 936  NSSG------SVED--SKVARTEPQQKG---TKASKLEYAEQYEPGIYITFTTLPSGQKG 984
              +        VED  +    T+  Q G    + SK E  EQ+EPG+Y+TF  L +G K 
Sbjct: 941  QKNAPVTNPLGVEDHVNAAGLTDLTQNGESSVQDSKPESTEQFEPGVYVTFIALKNGTKI 1000

Query: 985  LKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             KRVRFS+R+F  + AE WW+EN+  + +KY
Sbjct: 1001 FKRVRFSKRKFGGQQAEEWWKENKERLLRKY 1031


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 358/854 (41%), Positives = 500/854 (58%), Gaps = 64/854 (7%)

Query: 213  ERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            E  +   D+ +WGE +         D S     T  D L+PK LES VMLDV  ++ G K
Sbjct: 29   EDSESFGDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVK 88

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            HAALVT++ EVF WGE   GRLGH    +V  P+LVE LS  NV+ ++CGEF TCA+T +
Sbjct: 89   HAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTAT 148

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            G++YTWG   H A L+G   + SHW+P+++   LDG+ VS V+CG WHTA++++SGQL+T
Sbjct: 149  GDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYT 208

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            +GDGTFGVLGHGN  + S PKEVESL+GL+  SV+CG WHTAA+V++++   +SNA  GK
Sbjct: 209  FGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIIS--QSNASSGK 266

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            LFTWGD DK RLGH D   KL PTC+  L+D++F +A+CG  LT+GLT  G ++T+GS+V
Sbjct: 267  LFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSV 326

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            +GQLGNP    R   +VE +L    V  ++ GSYHVAVLT+ G VYTWGK ANG+LG GD
Sbjct: 327  YGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGD 386

Query: 573  SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHN 632
              +R+ PT VEALRDR V+ V CGSS TAAIC HK +S  +QS CS CR PFGF RK+HN
Sbjct: 387  IADRKVPTLVEALRDRSVKRVACGSSFTAAICQHKWVSGMEQSQCSACRQPFGFTRKRHN 446

Query: 633  CYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNL 692
            CYNCGL  C +CS+KK + A+L+PN GKP RVCD+CY  L K+  SG +    N  PR  
Sbjct: 447  CYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYVKLSKVLDSG-VSYSRNTIPR-- 503

Query: 693  LNLQGSL-SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQV- 750
              + G   +E +  +   + PS     +S   RN++ K  +  +  S  SS +    Q+ 
Sbjct: 504  --IPGDTKAERIDTKANKVAPSS----SSDMIRNLDVKAAKQTKK-SDYSSQVPAMLQLK 556

Query: 751  SCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLS-ESNKML 809
              P          S      P    ST  P LR   L  N+    S+   +   ++N++L
Sbjct: 557  DIPFISAPDLQNSSTVANQFPYDSRST-LPFLRMPYL--NYSSSLSSESSESLRDANELL 613

Query: 810  NEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
             +EVQ+L+ +  +L ++ +  + ++++ + K  EA +LA EEA K K AK++IKAL  +L
Sbjct: 614  KQEVQKLQAEVNSLRQEREQQDTELKKSEAKAHEAMNLATEEASKLKTAKDVIKALTAQL 673

Query: 870  HTLSEKI-SAAKEAKEG-----------------VDAN------------------LPPK 893
              +SE++   A + K G                  D N                  LP +
Sbjct: 674  KEMSERLPPGACDVKNGHLMGALASEMGRENQMRYDQNSIQYPQTHASVASARFGGLPAQ 733

Query: 894  LD--TDKHPEVKLPKDRKVDSLCS----SPIVFSNKLKSVYGRELCHDNSSGSVEDSKVA 947
            +   ++ +  V +P++ + + L      SP+  S     +  R    D+    V+  ++ 
Sbjct: 734  IHQTSNYNETVMVPQESRGEHLNGIREFSPVQQSANGGPIGYRYRPDDHDRREVDRFQIN 793

Query: 948  RTEPQQKGTKASK----LEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERW 1003
                  + + +       E+ EQYEPG+Y+T  +L  G K LKRVRFSRRRF E  AE W
Sbjct: 794  LQNLNMRSSSSPNNQVDAEWIEQYEPGVYLTLVSLCDGTKELKRVRFSRRRFGEHQAESW 853

Query: 1004 WEENQVVVYQKYGI 1017
            W +N+  VY+KY +
Sbjct: 854  WNDNREKVYEKYNV 867


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
            domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
            domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  624 bits (1608), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 389/1036 (37%), Positives = 584/1036 (56%), Gaps = 76/1036 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYSG++EKQ++L+ V +I+ GQRT  F+  P+P+++ QSFS+I    +RSLDLI
Sbjct: 59   DESALVWYSGKEEKQIKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICP--DRSLDLI 116

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK +AE W +GL++ I+  + S+  + ++ +     C   P  + RR          T
Sbjct: 117  CKDKDEAEVWVVGLKSLITRVKVSKWKTTIKPEITSAEC---PTPHARRVSPF-----VT 168

Query: 122  ELSQVRSLCGSPSLSLS-ERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPH-MET 179
             L QV       S      + FSD ++ ++       S+++Q +   N+  P SP     
Sbjct: 169  ILDQVIQPSNETSTQTRLGKVFSDIVAITA-----PPSNNNQTEASGNLFCPFSPTPANV 223

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPT------YGSPLIERKDILKDVMIWGEGVLGGDI 233
            EN        ++ R   N+  RL   +      +GS   E  D L DV +WGE +  G +
Sbjct: 224  EN--------SNLRFSTNDPFRLSLSSAVSTSSHGS-YHEDFDALGDVFVWGESISDGVL 274

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  +   S N T  DALLPK LES ++LD QNI+ G  HA LVTK+GE+F WGEGK G+
Sbjct: 275  SGTGN---SLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGK 331

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH +  D   PK +  + G+  +S++CG+F TCA+T+SG++Y+WG   H  DL+G    
Sbjct: 332  LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNE 391

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
             S W+P+++   L G+ VS VACG WHTA+V++SGQLFT+GDGTFG LGHG+ ++ S P+
Sbjct: 392  SSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPR 451

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIM--VDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
            EVESL GL V  VACG WHTAA+V++       + ++  G++FTWGD +KG+LGH D + 
Sbjct: 452  EVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDT 511

Query: 472  KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
            KLLP CV  L + +  Q +CG  LTV  T  G VYTMGS  +GQLGNP AK      VEG
Sbjct: 512  KLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEG 571

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
             + E  V+ I+ GSYHVAVLTS   +YTWGK  NGQLG G+ + +  P  V  LR++QV+
Sbjct: 572  DIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVK 631

Query: 592  SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN 651
            ++ CGS+ TA IC+HK +   + S C+ CR PF FRRK+HNCYNCGL FC  CS++K + 
Sbjct: 632  AITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLR 691

Query: 652  ASLTPNKGKPSRVCDTCYNHLQK------ITHSGRLLKQENQSPRNLLNLQGSLSEEVKE 705
            A+L P+  KP RVC  C+  L+K       T + R  K  N      ++ + SL+++   
Sbjct: 692  AALAPDMNKPYRVCYGCFTKLKKSRESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLS 751

Query: 706  EKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSV 765
                L+ S   S    + R+  R     + +++   S       V  P    +    K  
Sbjct: 752  VNARLS-SADSSLHYSERRHHRRDLKPEVNNSNVFPSMNGSLQPVGSPFSKGSTALPKIP 810

Query: 766  EP--TPIPKTQMS--THSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQAR 821
            +     IP + MS  T SP+  K +       +A+   K L +S    N+++  L++Q  
Sbjct: 811  KNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEVAAAESKQLKDS---FNQDMAGLKEQVE 867

Query: 822  NLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKE 881
             L  +     +++++ +++++   ++A +EAE+ ++AKE+I++L  +L  ++EK S    
Sbjct: 868  QLASKAHQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQLKEMAEKQS---- 923

Query: 882  AKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSV 941
             K+ +  N      TDK          K +++  +    SN+    + R +   +S    
Sbjct: 924  QKDSISTN---SKHTDKE---------KSETVTQT----SNQ---THIRSMVSQDSQN-- 962

Query: 942  EDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAE 1001
            E++  +++       +  K E   Q EPG+Y+T  +LP G   LKRVRFSR++FTE+ AE
Sbjct: 963  ENNLTSKSFANGHRKQNDKPEKVVQDEPGVYLTLLSLPGGGTELKRVRFSRKQFTEEQAE 1022

Query: 1002 RWWEENQVVVYQKYGI 1017
            +WW EN   V +++ I
Sbjct: 1023 KWWGENGAKVCERHNI 1038


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
            [Arabidopsis thaliana]
          Length = 1028

 Score =  624 bits (1608), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 388/1036 (37%), Positives = 584/1036 (56%), Gaps = 76/1036 (7%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYSG++EKQ++L+ V +I+ GQRT  F+  P+P+++ QSFS+I    +RSLDLI
Sbjct: 46   DESALVWYSGKEEKQIKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICP--DRSLDLI 103

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK +AE W +GL++ I+  + S+  + ++ +     C   P  + RR          T
Sbjct: 104  CKDKDEAEVWVVGLKSLITRVKVSKWKTTIKPEITSAEC---PTPHARRVSPF-----VT 155

Query: 122  ELSQVRSLCGSPSLSLS-ERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPH-MET 179
             L QV       S      + FSD ++ ++       S+++Q +   N+  P SP     
Sbjct: 156  ILDQVIQPSNETSTQTRLGKVFSDIVAITA-----PPSNNNQTEASGNLFCPFSPTPANV 210

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPT------YGSPLIERKDILKDVMIWGEGVLGGDI 233
            EN        ++ R   N+  RL   +      +GS   E  D L DV +WGE +  G +
Sbjct: 211  EN--------SNLRFSTNDPFRLSLSSAVSTSSHGS-YHEDFDALGDVFVWGESISDGVL 261

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  +   S N T  DALLPK LES ++LD QNI+ G  HA LVTK+GE+F WGEGK G+
Sbjct: 262  SGTGN---SLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGK 318

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH +  D   PK +  + G+  +S++CG+F TCA+T+SG++Y+WG   H  DL+G    
Sbjct: 319  LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNE 378

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
             S W+P+++   L G+ VS VACG WHTA+V++SGQLFT+GDGTFG LGHG+ ++ S P+
Sbjct: 379  SSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPR 438

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIM--VDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
            EVESL GL V  VACG WHTAA+V++       + ++  G++FTWGD +KG+LGH D + 
Sbjct: 439  EVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDT 498

Query: 472  KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
            KLLP CV  L + +  Q +CG  LTV  T  G VYTMGS  +GQLGNP AK      VEG
Sbjct: 499  KLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEG 558

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
             + E  V+ I+ GSYHVAVLTS   +YTWGK  NGQLG G+ + +  P  V  LR++QV+
Sbjct: 559  DIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVK 618

Query: 592  SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN 651
            ++ CGS+ TA IC+HK +   + S C+ CR PF FRRK+HNCYNCGL FC  CS++K + 
Sbjct: 619  AITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLR 678

Query: 652  ASLTPNKGKPSRVCDTCYNHLQK------ITHSGRLLKQENQSPRNLLNLQGSLSEEVKE 705
            A+L P+  KP RVC  C+  L+K       T + R  K  N      ++ + SL+++   
Sbjct: 679  AALAPDMNKPYRVCYGCFTKLKKSRESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLS 738

Query: 706  EKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSV 765
                L+ S   S    + R+  R     + +++   S       V  P    +    K  
Sbjct: 739  VNARLS-SADSSLHYSERRHHRRDLKPEVNNSNVFPSMNGSLQPVGSPFSKGSTALPKIP 797

Query: 766  EP--TPIPKTQMS--THSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQAR 821
            +     IP + MS  T SP+  K +       +A+   K L +S    N+++  L++Q  
Sbjct: 798  KNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEVAAAESKQLKDS---FNQDMAGLKEQVE 854

Query: 822  NLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKE 881
             L  +     +++++ +++++   ++A +EAE+ ++AKE+I++L  +L  ++EK S    
Sbjct: 855  QLASKAHQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQLKEMAEKQS---- 910

Query: 882  AKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSV 941
             K+ +  N        KH +       K +++  +    SN+    + R +   +S    
Sbjct: 911  QKDSISTN-------SKHTD-----KEKSETVTQT----SNQ---THIRSMVSQDSQN-- 949

Query: 942  EDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAE 1001
            E++  +++       +  K E   Q EPG+Y+T  +LP G   LKRVRFSR++FTE+ AE
Sbjct: 950  ENNLTSKSFANGHRKQNDKPEKVVQDEPGVYLTLLSLPGGGTELKRVRFSRKQFTEEQAE 1009

Query: 1002 RWWEENQVVVYQKYGI 1017
            +WW EN   V +++ I
Sbjct: 1010 KWWGENGAKVCERHNI 1025


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 394/962 (40%), Positives = 539/962 (56%), Gaps = 100/962 (10%)

Query: 109  RRKHNLGLLEDATE--LSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNL 166
            +  H+L ++    E  L  V SL GSP L +  +     L  S   F   + + S++ + 
Sbjct: 89   KESHSLSVIYKNGESSLDLVHSLYGSPRL-IQNKYLHSNLDCSEPFFSPRQKAWSELDSY 147

Query: 167  SNIITPSSPHMETENFMKWELNYADTRCPKN-ESHRLVTPTYGSPLIERK-------DIL 218
               I+P     E  N +K   N  D R  +  +  R++      P +++        D L
Sbjct: 148  LEKISP-----ELVNRVK--NNLRDIRSAETIKDQRIIQ----MPKLKQSEGSNAATDSL 196

Query: 219  KDVMIWGEGVLG--GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
            KD+ +WG+ VLG   D G     ++S         LP+LL+S+ +L+VQ+I+ G KHAA+
Sbjct: 197  KDIFVWGD-VLGRMSDHGHVPATNIS---------LPRLLKSSQILNVQSIACGEKHAAI 246

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
            VTK+G+VF WGE   GRLGHK +  VS PK+++ L+   V++++ G   TCA++ SGE+Y
Sbjct: 247  VTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELY 306

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
             WG   H       +  RS W P KL  T DG+ V K+ACG+WHTAI+S+ G+L+TYG G
Sbjct: 307  EWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGYG 366

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            TFGVLGHG+  +V  PKEVESLRG + KSVACGPWHTAAIV+      KS+A GGKLFTW
Sbjct: 367  TFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVETS-GTLKSSAPGGKLFTW 425

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GDA  G+LGH + + KL+PT V  L+D DF Q SCG  LT  LT  G V+T+GS  HGQL
Sbjct: 426  GDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQL 485

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            GN ++ + SI +VEG LK EFVK IS GS HVAVLT  G V+TWGK   GQLGLGD  +R
Sbjct: 486  GNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDR 545

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNC 636
             +PT VEAL D+QV+S+ C S+ TA  C+H+ IS  DQS CS CR+ F F RKKHNCYNC
Sbjct: 546  SSPTLVEALEDKQVDSIACSSNFTAVTCVHREISSKDQSVCSSCRLAFRFTRKKHNCYNC 605

Query: 637  GLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRL-----LKQENQSPRN 691
            G  FC++CS+ K+  A+L P+K K  RVCD C+N L K    G++      ++E  S   
Sbjct: 606  GSMFCNSCSSNKVQRAALAPDKSKRCRVCDACFNELNKTAQHGKMSCGSKTQKEESSLTE 665

Query: 692  LLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVS 751
                   LS  +KE    +     +   S QS N   +     ESA+      QRWGQV 
Sbjct: 666  TRTYTPKLSRMLKEANFIM-----EKMGSAQSPNQRNQ-----ESATLNQMQRQRWGQVE 715

Query: 752  CPIRFKTHCHEKSVEPTPIPKTQM-------STHSPLLRKISLGSNFIPIAST---VEKD 801
            CP +FK  C   ++      K Q            P+ +K +     +P A+     E+D
Sbjct: 716  CPDQFK--CARDNIPHWLTSKKQTIDVLCIGRMTDPVSQKTTAP---LPQATNDRRKEQD 770

Query: 802  LSESNKMLNEEVQRLR---------DQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEA 852
            L E  K+L EEV++L+          Q   L ++C+  + KVQ  ++K+EE W + ++EA
Sbjct: 771  LME--KILLEEVKQLQAQMVILLLPKQVTTLAEECRHRSLKVQLYKRKLEETWLIVKDEA 828

Query: 853  EKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLD--TDKHPEVKLPKDR-- 908
             KCKAAKEIIK L  + + LS K+    E  +      PP     T K P +   +D+  
Sbjct: 829  TKCKAAKEIIKILTNQRNALSNKLLDDLELDDSSIVPDPPDKTHVTGKIPPLNSIRDQHN 888

Query: 909  ----KVD---SLCSSPIVFSNKLKSVYGRELCHDNSSGSVE---DSKVARTEPQQKGTKA 958
                +VD   +  S+  V  N      GR    ++S+G  +   DS +A T+        
Sbjct: 889  NNIEEVDMQSTTSSNTAVVDNSAVHQNGRR-ASNSSTGWYDGGTDSTIAPTDSNG----- 942

Query: 959  SKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIE 1018
                  EQ E G+YIT  T PSG KG+KR+RFSR+ F E  A++WWE+N+  V+ KY   
Sbjct: 943  ----VIEQIERGVYITVVTSPSGNKGIKRIRFSRKHFGEAEAQKWWEDNESKVFAKYNSM 998

Query: 1019 EY 1020
            EY
Sbjct: 999  EY 1000


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 392/1068 (36%), Positives = 580/1068 (54%), Gaps = 114/1068 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  LIW S  +EK L+L+SV++II GQRT  F+   +P++   SFS+IY  GERSLDLI
Sbjct: 46   DETKLIWISHGREKNLKLSSVSRIIPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLI 105

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CK++ + E W                FS L+        + SP   IRR          +
Sbjct: 106  CKNQAEVEVW----------------FSSLK-------ALISPGERIRR--------GTS 134

Query: 122  ELSQVRSLCGSPSLSLSERCFSDGLSYSSD---SFYSSESSSSQIQNLSNIITPSSPHME 178
            +LS       S  L  ++R ++  L ++S      +S ES S               H  
Sbjct: 135  DLSN-----DSVDLIPNDRPYAGTLEFASSIARGRFSFESVS---------------HES 174

Query: 179  TENFMKWELNY-ADTRC---PKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIG 234
            T ++ + E N    T C    +     +   +     ++  + L DV IWGE  +  D G
Sbjct: 175  TSSWSRSETNMPVRTSCGDGSRVSVSSVSHSSSVGSGLDDIESLGDVYIWGE--VWAD-G 231

Query: 235  GAVDGSVSQNKT--QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
             + DG  SQ +   + D L PK LES V+LDV  I  G +H ALVT++GEVF WGE   G
Sbjct: 232  NSFDGLGSQLQAFCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGG 291

Query: 293  RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
            RLGH    D   P LVE L+  NV  V+CGE+ +CA++ SG+++TWG   HGA L+G   
Sbjct: 292  RLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGT 351

Query: 353  SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
              S+W+P+++   L+G++V  VACG WH+A+ +++G+LFT+GDG FGVLGHGN  +V+ P
Sbjct: 352  DVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYP 411

Query: 413  KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
            KEV+ L G K   VACG WH+AAI+D+M D   S A   +LFTWGD D+ RLGH + E  
Sbjct: 412  KEVQLLSGYKAIKVACGVWHSAAIIDVM-DLSGSKASAKRLFTWGDGDQYRLGHANKETY 470

Query: 473  LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
            L PTCV  + +++F Q +CG  +TV LT  G V++MG   +GQLGNP +  +   +V  K
Sbjct: 471  LEPTCVAAVAEYNFHQVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGKVPILVRDK 530

Query: 533  LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            L  EFV+ IS G+ HVAVLTS   +YTWG+ ANG+LG GD+ ++++PT VEAL+DR V++
Sbjct: 531  LVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKN 590

Query: 593  VVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINA 652
            + CGS+ T+ ICLHK +S  DQS CS CR PFGF RK+HNCY+CGL +C  CS+KK   A
Sbjct: 591  ISCGSTFTSCICLHKWVSGVDQSVCSDCRQPFGFTRKRHNCYHCGLVYCHPCSSKKASKA 650

Query: 653  SLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTP 712
            +L P   KP RVCD CY  L+    +    ++ ++   ++   +     EV+  +  L P
Sbjct: 651  ALAPTPSKPHRVCDACYAKLKGSDSASDFNREISRPSSSVYGRESFHRGEVRSSRVLLPP 710

Query: 713  SRGQSFTSKQSRNVE---RKPGEC-----LESASSLSSGLQRWGQVSCPIRFKT--HCHE 762
                  T++  + +E    KPG       +  A+ + + LQ    V+ PI   +  + ++
Sbjct: 711  ------TTEPVKYLEIRTNKPGNMHDFSSIVRAAQVPTSLQ-LKDVAFPISLSSAQNVYK 763

Query: 763  KSVEPTPIPKTQMSTHSPLLRKISLGSNFIP--IASTVEKDLSESNKMLNEEVQRLRDQA 820
              ++PTP         SP  R+            + ++  +L + N  LN++V + ++  
Sbjct: 764  PVIQPTPPTPATPIPMSPYARRPPSPPRSTSPGFSRSLIDNLRKKNDHLNQQVSKWQNNN 823

Query: 821  RNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKIS--- 877
            +NL+++  + + K++E Q+ IEEA S   EE+ K + AKE+IK+L  +L  ++EK+    
Sbjct: 824  QNLKQKSDMQDMKIRELQKNIEEAVSRVGEESSKLRKAKELIKSLTDKLREVTEKLPLEI 883

Query: 878  AAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIV-----FSNKLK------- 925
               E    + A     L  +K  E             S+P V      S+KL+       
Sbjct: 884  PDNETLRTMHAQAEEFLHEEKDFESSSSPQSLESEQQSAPDVPASESDSSKLQEQRMEGN 943

Query: 926  --------SVYGRELCHDNSSGSVEDSKVAR------TEPQQKGTKASKLEYA--EQYEP 969
                    S+ G  +  ++S+ SV    V        ++ +  G   ++ E +  EQ+E 
Sbjct: 944  DDAFGVVPSIDGENILEESSNSSVSGPVVTSPSSGNGSKLRDTGIPVTEGEKSVIEQFEH 1003

Query: 970  GIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            G+Y+T   LP G K  KR+RFS+RRF EK AE WW +N+  V+ KY +
Sbjct: 1004 GVYVTLVVLPRGYKVFKRIRFSKRRFNEKQAEEWWNQNKDKVHSKYNL 1051


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 375/996 (37%), Positives = 555/996 (55%), Gaps = 58/996 (5%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  L W S  +EK L+L +V++I+ GQRT  F+   +P++   SFS+IY NG+RSLDLI
Sbjct: 51  DETTLFWLSHGEEKGLKLATVSRILPGQRTAVFRRYLRPEKDYLSFSLIYHNGDRSLDLI 110

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
           CKDK + E WF GL+            S +R+ R  Q+    P   I           +T
Sbjct: 111 CKDKAETEVWFAGLK------------SLIRQNRNKQAKSEIPEVSIHDSDCF-----ST 153

Query: 122 ELSQVRSLCGSPSLSLSERCFSD-GLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
                 S+  +P+ +   R   D G+  S   F SS+    +     N++ PS     T+
Sbjct: 154 GRPSTASIDFAPNNTRRGRTSIDLGIQNSPTKFGSSDVGYER----GNMLRPS-----TD 204

Query: 181 NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
            F          R   + +    T T G   IE    L DV +WGE  +  D G + DG 
Sbjct: 205 GF----------RISVSSTPSCSTGTSGPDDIES---LGDVYVWGE--VWSD-GISPDGV 248

Query: 241 VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
           V+    ++D L+PK LES V+LDV  I+ G +H ALVT++GEVF W E   GRLGH + +
Sbjct: 249 VNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQV 308

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           DV  PKLVE L+  N+  V+CGE+ TCA++ SG+++TWG   H   L+G     SHW+P+
Sbjct: 309 DVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPK 368

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
           ++   ++G++V  VACG WH+A+ + +G+LFT+GDG FGVLGHG+ ++VS PKEV+ L G
Sbjct: 369 RVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSG 428

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
           LK   VACG WHT AIV++M ++  ++    KLFTWGD DK RLGH + E  LLPTCV+ 
Sbjct: 429 LKTLKVACGVWHTVAIVEVM-NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSS 487

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           L+D++F Q +CG   TV LT  G V+TMG   HGQLG+  +  +   +V+ +L  EFV+ 
Sbjct: 488 LIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEE 547

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           IS G +HVAVLTS   V+TWGK +NG+LG GD  +R+TPT VEALR+R V+S+ CGS+ T
Sbjct: 548 ISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFT 607

Query: 601 AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
           ++IC+HK +S  DQS CS CR  FGF RK+HNCYNCGL  C ACS+KK + A+L P  GK
Sbjct: 608 SSICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGK 667

Query: 661 PSRVCDTCYNHLQ--KITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
           P RVCD CY  L+  +  ++  +  + + +P   L+  G    +++  +  L+P   ++ 
Sbjct: 668 PHRVCDACYTKLKAGESGYNSNVANRNSTTPTRSLDGTGRPDRDIRSSRILLSP---KTE 724

Query: 719 TSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTH 778
             K S     +    +  AS + + LQ+   V+ P        + + +P     T     
Sbjct: 725 PVKYSEVRSSRSESSIVRASQVPA-LQQLRDVAFPSSLS--AIQNAFKPVASSSTSTLPS 781

Query: 779 SPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQ 838
                +IS        +  +   L +SN ++N+E+ +L+ Q +NL+++C     ++Q  +
Sbjct: 782 GTRSSRISSPPRSSGFSRGMIDTLKKSNGVINKEMTKLQSQIKNLKEKCDNQGTEIQRLK 841

Query: 839 QKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAK---EAKEGVDANLPPKLD 895
           +   EA  LA + + K KAA E++K++A  L  L EK+       EA E +++     L+
Sbjct: 842 KTAREASDLAVKHSSKHKAATEVMKSVAEHLRELKEKLPPEVSRCEAFESMNSQAEAYLN 901

Query: 896 TDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKG 955
             +  E  LP    +      P   +N        E    ++ G++   + + T      
Sbjct: 902 ASEASESCLPTT-SLGMGQRDPTPSTNTQDQ--NIEEKQSSNGGNMRSQEPSGTTEASSS 958

Query: 956 TKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFS 991
           +K    E  EQ+EPG+Y+T+    +G K  +RVRFS
Sbjct: 959 SKGGGKELIEQFEPGVYVTYVLHKNGGKIFRRVRFS 994


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1027

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 391/1060 (36%), Positives = 580/1060 (54%), Gaps = 125/1060 (11%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
            DE  L+WYSG++EKQ++L+ V +I+ GQRT  F+  P+P+++ QSFS+I    +RSLDLI
Sbjct: 46   DESALVWYSGKEEKQIKLSQVLRIVPGQRTSTFKRYPRPEKEYQSFSLICP--DRSLDLI 103

Query: 62   CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
            CKDK +AE W +GL++ I+  + S+  + ++ +     C   P  + RR          T
Sbjct: 104  CKDKDEAEVWVVGLKSLITRVKVSKWKNTIKPEITSAEC---PTPHARRVSPF-----VT 155

Query: 122  ELSQVRSLCGSPSLSLS-ERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPH-MET 179
             L QV       S      + FSD +S ++       S+++Q +  +N+  P SP  +  
Sbjct: 156  ILDQVIQPSNETSTQTRLGKVFSDIVSITA-----PPSNNNQTETSANLFCPFSPTPVNV 210

Query: 180  ENFMKWELNYADTRCPKNESHRLVTPT------YGSPLIERKDILKDVMIWGEGVLGGDI 233
            EN        +  R   N+  RL   +      +GS   E  D L DV +WGE +  G +
Sbjct: 211  EN--------SSLRFSTNDPIRLSLSSAVSTSSHGS-YHEDFDALGDVFVWGESICDGVL 261

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  +   S N T  D LLPK LES ++LD QNI+ G  HA LVTK+GE+F WGEGK G+
Sbjct: 262  TGTGN---SLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGK 318

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH +  DV  PK +  + G+  +S++CG+F TCA+T+SG++Y+WG   H  DL+G    
Sbjct: 319  LGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNE 378

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
             S W+P+++   L G+ VS VACG WHTA+V++SGQLFT+GDG+FG LGHG+ ++ S P+
Sbjct: 379  SSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPR 438

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG---GKLFTWGDADKGRLGHVDGE 470
            EV+ L GL V  VACG WHTAA+V++  +      +G   G++FTWGD +KG+LGH D +
Sbjct: 439  EVKILSGLIVTKVACGVWHTAALVEV-TNEASEAEVGSSRGQVFTWGDGEKGQLGHGDND 497

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             +LLP CV  L + +  Q +CG  LTV LT  G VYTMGS  +GQLGNP AK      VE
Sbjct: 498  AQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVE 557

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            G + E  V+ I+ GSYHVAVLTS   +YTWGK  NGQLG G  + +  P  V  L+++QV
Sbjct: 558  GDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQV 617

Query: 591  ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
            +++ CGS+ TA IC+HK +   + S C+ CR PF FRRK+HNCYNCGL FC  CS++K +
Sbjct: 618  KAITCGSNFTAVICVHKWVPGSEHSLCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSL 677

Query: 651  NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGAL 710
             A+L P+  KP RVC  C+  L+K               R LLN++ S       E+ +L
Sbjct: 678  RAALAPDMNKPYRVCYGCFTKLKKSREPS--TSTPTSRARKLLNMRKSTD---VSERDSL 732

Query: 711  TPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIR-FKTHCHEKSVEPT- 768
            T    Q F S  +R         + SA S    L  +G+     R  K   +  +V P+ 
Sbjct: 733  T----QKFLSAHAR---------ISSADS----LLHYGERRHHRRDLKPEVNNSNVFPSM 775

Query: 769  -------------------PIPKTQM----------STHSPLLRKISLGSNFIPIASTVE 799
                                IPK  M           T SP+  K +       +A+   
Sbjct: 776  NGSLQLVGSPLSKGSTALPKIPKNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEVAAAES 835

Query: 800  KDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAK 859
            K + +S    N ++  L++Q   L  +     +++++ +++++   ++A +EAE+ ++AK
Sbjct: 836  KQIKDS---FNHDMAGLKEQVEQLTSKTHQLEEELEKTKRQLKVVTAMAADEAEENRSAK 892

Query: 860  EIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIV 919
            E+I++L  +L  ++E+ S     K+ +  N                  ++ D   S    
Sbjct: 893  EVIRSLTTQLKEMAERQS----QKDAISTN-----------------SKRTDKETSEITQ 931

Query: 920  FSNK--LKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTT 977
             SN+  ++S+   +  H+N+  S   +   R + +       K E   Q EPG+Y+T   
Sbjct: 932  TSNQTHIRSMVSHDSQHENNLTSRSFANGHRKQNE-------KPERVVQDEPGVYLTLLA 984

Query: 978  LPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            LP G   LKRVRFSR++FTE+ AE+WW EN   V +++ I
Sbjct: 985  LPGGGTELKRVRFSRKQFTEEQAEKWWGENGAKVCERHNI 1024


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 349/762 (45%), Positives = 462/762 (60%), Gaps = 47/762 (6%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  L+WYSG+ EKQL+L+ V+KII GQRT  FQ  PQP+++ QSFS++Y   +RSLDLI
Sbjct: 46  DESLLVWYSGKDEKQLKLSLVSKIIPGQRTAIFQQYPQPEKEYQSFSLLY--NDRSLDLI 103

Query: 62  CKDKVQAESWFLGLRAAIS--SCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLED 119
           CKDK +AE WF+GL+A I+  + R+ R      E R       SP + +RR        D
Sbjct: 104 CKDKDEAEVWFVGLKALITRGNHRKWRV-----ESRCESVSSDSPHARLRRNSPSITPCD 158

Query: 120 ATELSQVR-SLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHME 178
             +L  V     G   L    + FS+ LSY++ S  +S+  S        I+ PS     
Sbjct: 159 PGDLDGVSYENTGQNRLG---KAFSELLSYTAVSKGTSQPKS--------IVNPSLSTAL 207

Query: 179 TENFMKWELNYADTRCPKNESHRLVTPTYGSPLI-----ERKDILKDVMIWGEGVLGGDI 233
            +N        ++ R   +E  R+   +  S        E  D L DV IWGEG+  G +
Sbjct: 208 IDN--------SNGRISASEGFRVSLSSAVSSSSQGSCPEDFDALGDVYIWGEGIGDGLL 259

Query: 234 GGAVD--GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
           GG V+  GS     +++DALLPK LES V+LDV  I+ G +HA LVT++GE+F WGE   
Sbjct: 260 GGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESG 319

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           GRLGH V  DVS PK+++ LSG NV+ V+CGE+ TCA+T SG++YTWG   H   L+G  
Sbjct: 320 GRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHG 379

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
              SHW+P+K+   ++G+RVS ++CG WHTA+V+++GQLFT+GDG+FG LGHG+    + 
Sbjct: 380 SEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF 439

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG----KLFTWGDADKGRLGHV 467
           P+EVE+LRGL+   VACG WHTAA V+ + +   S         KL+TWGD DKGRLGH 
Sbjct: 440 PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHG 499

Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
           D E +L+P CV  L++    Q +CG  LTV LT  G+VYTMGS  +GQLG+  A  +  T
Sbjct: 500 DNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPT 559

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            VEG++   FV+ ++ GSYHVAVLTS   VYTWGK  NGQLG GD+  R TPT V+ L+D
Sbjct: 560 CVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKD 619

Query: 588 RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
           +QV++V CGS  T  IC+HK +S  D S CS C  PFGFRRK+HNCYNCGL FC ACS+K
Sbjct: 620 KQVKNVACGSKFTVVICIHKWVSSADHSVCSGCHNPFGFRRKRHNCYNCGLVFCKACSSK 679

Query: 648 KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNL-LNLQGSLSEEVKEE 706
           K + ASL PN  KP RVCD C+N L+KI  S  + +       N+     G + +E    
Sbjct: 680 KSLKASLAPNLNKPYRVCDDCFNKLKKIMESSSVSQNARARTGNIHYKSNGVMDKETWVP 739

Query: 707 KGALTPSRGQSF------TSKQSRNVERKPGECLESASSLSS 742
           K   T SR  SF       S  SR   R     L ++S + S
Sbjct: 740 KLQATLSRLSSFGAINNAESMHSRLASRATSPVLGTSSPIRS 781


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 337/841 (40%), Positives = 486/841 (57%), Gaps = 57/841 (6%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV +WGE V    +    DGS+S    + D L PK LES V+LDVQ I+ G +H ALV
Sbjct: 224  LGDVYLWGE-VWSDAV--FPDGSMSSVPIKNDVLTPKPLESNVVLDVQQIACGVRHVALV 280

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH    D SCP+LVE L+  NV  V+CGE+ TCA+T SG++YT
Sbjct: 281  TRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDLYT 340

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG     A L+G+    SHW+P+++   L+G++V  +ACG WH+A+ +++G+LFT+GDG 
Sbjct: 341  WGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFGDGA 400

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FGVLGHG+ +++S PKEV+ L GLK   VACG WHTAAIV++M  +  +N    KLFTWG
Sbjct: 401  FGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAIVEVM-SQSGANVSSRKLFTWG 459

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH   +  LLPTCV+ L+D++F Q +CG+ LTV LT  G V+TMG   HGQLG
Sbjct: 460  DGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG 519

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            NP +  +  T+V+  L  EFV+ +S G++HVAVLTS   +YTWGK ANG+LG GD+++R 
Sbjct: 520  NPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRR 579

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
            TPT VEAL+DR V+++ CGS+ T +IC+HK +S  DQS CS CR  FGF RK+HNCYNCG
Sbjct: 580  TPTLVEALKDRHVKNISCGSNFTTSICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCG 639

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
            L  C ACS+KK + A+L P  GKP RVCD CY  L+        + ++  +PR  ++++ 
Sbjct: 640  LVHCHACSSKKALKAALAPTPGKPHRVCDACYAKLKTSDTGNYNINRKATTPRRSIDIRE 699

Query: 698  SLSE-EVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESA---------------SS 739
             +   E    +   +PS    +    K  R   R     +  A               SS
Sbjct: 700  KMDRGEANTSRTLFSPSTEPIKYLEIKSVRPGMRSEAPSIVRASQVPNLLQLKDIAFPSS 759

Query: 740  LSSGLQRWGQVSCPIRFKTHCHEKSVEP--TPIPKTQMSTHSPLLRKISLGSNFIP-IAS 796
            LS+    W  VS P+         S+ P  +P P       SP  R+ S      P  + 
Sbjct: 760  LSAIQNAWKPVSSPV---------SLSPLNSPQPMGNSRPASPYSRRPSPPRISSPGFSR 810

Query: 797  TVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCK 856
            +V   L ++N++L  ++ ++++Q +  +++C     ++Q+ Q++  E    A+ EA KC+
Sbjct: 811  SVIDSLKKTNEILKNDMTKVQNQMKTFKQKCDAQETEIQKLQKEANETALSAKREASKCR 870

Query: 857  AAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSS 916
             AKE++K+LA +L  ++ ++    +  E   A +  +++T  H           +SL S 
Sbjct: 871  VAKELVKSLAEQLKEMTVQLPPDIQDNETFKA-MNGQIETFLHIYETSESSSVAESLMSG 929

Query: 917  PIVFSNKLKSV-------YGRELCHDNS----SGSVEDSKVARTEPQQK----------- 954
                S+   ++          +L HD S    S  +  S    T P              
Sbjct: 930  QKRASDTTSNMQENRIEYQATDLSHDGSVPQDSHRLSVSSNPETVPHHNSSEHESRSHDA 989

Query: 955  GTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQK 1014
             T   + E  EQ+EPG+Y+TF    +G K  KRV+FS+RRF E+ AE WW+EN+  + ++
Sbjct: 990  STSKKEGESIEQFEPGVYVTFVQRSNGVKIFKRVKFSKRRFQEQQAEVWWKENKDRLLRR 1049

Query: 1015 Y 1015
            Y
Sbjct: 1050 Y 1050



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/88 (54%), Positives = 61/88 (69%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S  +EK L L+SV++II GQRT  F+   +P++   SFS++Y NGER+LDLI
Sbjct: 46  DETTLIWLSRGEEKILNLSSVSRIIPGQRTAVFRRFLRPEKDYLSFSLLYNNGERTLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFS 89
           CKDKV+AE W  GL+A I   R  RT S
Sbjct: 106 CKDKVEAEVWLAGLKALIGRNRGRRTRS 133


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 360/910 (39%), Positives = 526/910 (57%), Gaps = 71/910 (7%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE+FLIWY+G+ EKQL+L+ V+KI+ GQ T  FQ  PQP+++ QSFS+IY+N  RSLD+I
Sbjct: 47  DERFLIWYAGKLEKQLKLSHVSKIMPGQHTAIFQRYPQPEKEYQSFSLIYSN--RSLDVI 104

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
           CKDKV+AE W + LRA IS        SC +     QS  +SP S+ R+     +   ++
Sbjct: 105 CKDKVEAEVWIVALRALISQ------NSCCKRIGDPQSDANSPRSHARKSSLSNVSCTSS 158

Query: 122 ELSQVRSLCGSPSLSLSE--------RCFSDGLSYSS--DSFYSSESSSSQIQNLSNIIT 171
           ++         P L   E        + FS+ LS+++   ++  +ES +  + NLS+ I+
Sbjct: 159 DIIYKDPEDTHPILVPYETSPQNRLGKAFSEVLSFTAAAKAYTQAESVARSLSNLSSGIS 218

Query: 172 P-SSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLG 230
             ++ H    +  +   + A +      SH            E  D   DV+  GEG+  
Sbjct: 219 DDANSHSSAVDAFRNSSSSAVSSSGYVSSH------------EDVDGPGDVLFLGEGISN 266

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
             +GG +    S    ++DALLPK L+    LD Q I+ G+KHA +VTK+G++F WGE  
Sbjct: 267 LPLGGNMYDVKSSPIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESS 326

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            G+LGH  + DVS PK+++ LS  NV  V+CGEF TCA+T SG +YTWG + H    +G 
Sbjct: 327 GGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGH 386

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             + SHW+PR++   ++ VR+S V+CG WHTA VS+ G+LFT+GDGTFG LGHG+  + S
Sbjct: 387 GSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTS 446

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIM--VDRCKSNAIGGKLFTWGDADKGRLGHVD 468
           +P+EVESL+GL+   V+CG WHTAA++D +   DR  + ++ GKLFTWG  ++G+LGH D
Sbjct: 447 KPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDT-SLSGKLFTWGAGERGQLGHGD 505

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
            E +L+P+CV+  +     Q +C   +T+ LT LG+VYTMG+A +GQLG+P +  +    
Sbjct: 506 EEPRLVPSCVS--MPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIH 563

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            +G ++   +K I+ GS+HV  L+S G VYTWGK  NGQLG GD ++R TPT V+AL+ +
Sbjct: 564 TDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHK 623

Query: 589 QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
           QV+SVVCGS+ TA IC HK +S  DQS CS C  PF FRRK+HNCYNCGL FC ACS+K+
Sbjct: 624 QVKSVVCGSNFTAVICPHKCVSSADQSICSGCHNPFNFRRKRHNCYNCGLLFCKACSSKR 683

Query: 649 IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKE--E 706
            + A+L PN  KPSRVCD C+  L      G  L    Q P+   + +GSL    KE  E
Sbjct: 684 SLKAALAPNVNKPSRVCDECFAKLTTAMEDGPKL----QVPK---SCRGSLHYNCKEIAE 736

Query: 707 KGALT--PS----RGQSFTS-----KQSRNVERKPGECLESASSLSSGLQRWGQVSCPIR 755
             ++T  PS    R  S  S     +Q+    +K   C    S    G   W        
Sbjct: 737 AESITSNPSHQHCRLSSLDSFKQALRQNSQHNKKAESCQCHVSPTQIGSLEW---ELTYE 793

Query: 756 FKTHCHEKSVEP---------TPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESN 806
           ++      + +P         +P+ +     HS  LR  S  +NF   A  +  +  + N
Sbjct: 794 YEDLGEMSASDPGSGMLSRATSPVSRRSSQEHS--LRSASSFNNFAH-AELLPDNSKQRN 850

Query: 807 KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALA 866
           + L++E+  LR Q  +L  + ++    +    ++++EA    ++E+EK K AKEII++L 
Sbjct: 851 ESLSQEILLLRGQVPDLTHRSRVLEADIDRTSRQLKEATETVKKESEKNKVAKEIIRSLT 910

Query: 867 VRLHTLSEKI 876
            +L  +   I
Sbjct: 911 AQLKDMPISI 920


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 385/1074 (35%), Positives = 564/1074 (52%), Gaps = 110/1074 (10%)

Query: 2    DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL- 60
            DE  LIW S  KEK L+L+SV +II GQRT  F+   +P++   SFS+IY  GERSLDL 
Sbjct: 40   DETSLIWISHGKEKNLKLSSVLRIISGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLV 99

Query: 61   ---ICKDKVQAESWFLGLRAAISS--CRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLG 115
               ICKD  + E W  GL+A IS+   R  RT S L +     S    P          G
Sbjct: 100  RENICKDTAEVEVWLSGLKALISTGQLRNRRTRSELTDDSNDISPNDRPFG--------G 151

Query: 116  LLEDATELSQVR-SLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSS 174
             LE    + + R S    P  S S R    G  ++S                        
Sbjct: 152  ALEFTASIPKGRFSFEAVPRESTSNRRSDAGSEHTS------------------------ 187

Query: 175  PHMETENFMKWELNYADTRCPKNESHRLVTPT--YGSPLIERKD---ILKDVMIWGEGVL 229
                           A  R    +  R+   +  Y S ++   D    L DV IWGE   
Sbjct: 188  --------------MAPVRTSVGDGSRVSVSSTNYASSVVSGPDDIESLGDVFIWGEVWA 233

Query: 230  GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
             G+   + DG  SQ  +++D L+PK LES V+LDV  I  G  H ALVT++GE+F WGE 
Sbjct: 234  EGN---SSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWGED 290

Query: 290  KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
              GRLGH  + D   P+LV+ L+  +V  V+CGE+ TCA++ SG++YTWG   H A ++G
Sbjct: 291  SGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAGILG 350

Query: 350  ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                 SH +P+++   L+G +V  +ACG WHTA+++++G+LFT+GDGT GVLGHG+ ++V
Sbjct: 351  HGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGDRESV 410

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDI--MVDRCKSNAIGGKLFTWGDADKGRLGHV 467
            + PKE++ L G K   VACG WHTAAI+++        + +   KLFTWGD D+ RLGH 
Sbjct: 411  AYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHA 470

Query: 468  DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            + E  L PTCV  L D++F+Q +CG  LTV LT  G V+TMGS  +GQLGNP +  +   
Sbjct: 471  NKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKVPI 530

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            +V  KL+ E V+ IS G++HVAVLTS   +YTWG+ ANG+LG GD ++++TP  VEAL++
Sbjct: 531  LVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKE 590

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            R V+++ CG++ T  IC+HK +S  DQS CS CR PFGF RK+HNCY+CGL +C  CS+K
Sbjct: 591  RHVKNIACGANFTTCICIHKWVSGNDQSVCSGCRQPFGFTRKRHNCYHCGLVYCHPCSSK 650

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEK 707
            K + A+L P   KP RVCD CY  L+   +S       +   + +     S+    K E+
Sbjct: 651  KALKAALAPTPSKPHRVCDACYAKLKGCENS-----NASHFNKEITRPSSSVYGREKTER 705

Query: 708  GALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTH------CH 761
              + PS+   F    +  + +  G   ES+S     LQ    +       T         
Sbjct: 706  VEVRPSK---FLLSSATCLVKSLGSTHESSSMAGDALQLKDIIFPGPSSATQKASRALIM 762

Query: 762  EKSVEPTPIPKTQMSTHSPLLRKISLGSNFIP--IASTVEKDLSESNKMLNEEVQRLRDQ 819
            ++S  PTP P       SP  R+    +  +    + ++   L + N+ LN+EV +L++ 
Sbjct: 763  QQSQAPTPPPSANSRPASPYSRRPPSPTRSVSPGFSRSLIDSLKKKNEHLNQEVSKLQNH 822

Query: 820  ARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAA 879
             R+L+++  + + K++E Q+ IEEA  LA EE+ K + AKE IK++   L  ++EK+   
Sbjct: 823  IRSLKQKGDMQDIKIRELQKNIEEANLLAGEESSKHREAKEFIKSITEELSEVTEKLPPE 882

Query: 880  KEAKEGV-----------------DANLPPKLDTDKHPEVKLP-KDRKVDSLCSSPIVFS 921
                E +                 +++  P  ++++     +P  D    +L    +  +
Sbjct: 883  IPGSETLKVIHAQAQNLLKENLEFESSFQPSFESEQQRAPDIPASDGDSSNLQEQRLEGN 942

Query: 922  NKLKSVYGRELCHD-------------NSSGSVEDSKVARTEPQQKGTKASKLEYAEQYE 968
            N++  V       D             N+          R++   +  +  +    EQ+E
Sbjct: 943  NEVSEVVRSTNGADDRQESSSSSYLSTNAVSPPNSENSIRSQESSRPVREGETSVIEQFE 1002

Query: 969  PGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYSN 1022
             G+YIT   +  G K  KRVRFSRRRF+E+ AE WW  N+  VY++Y     +N
Sbjct: 1003 RGVYITAIVIADGSKIFKRVRFSRRRFSEQQAEEWWSNNKDRVYRRYNPPPINN 1056


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
            protein [Zea mays]
          Length = 964

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 370/930 (39%), Positives = 528/930 (56%), Gaps = 80/930 (8%)

Query: 117  LEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIITPSS 174
            +ED ++  ++R+  GSP  +  E+ FSD + Y+     F+ S+S++  + ++S      S
Sbjct: 69   IEDGSDNYRLRTPYGSPPKNGLEKAFSDVMLYAVPPRGFFPSDSNAGSVHSMS------S 122

Query: 175  PHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIG 234
               +  N     +     R   + +    +   G    +  D L DV IWGEG   G +G
Sbjct: 123  GQSDNTNGHSRGVPMDAFRVSYSSAVSSSSHGSGH---DDGDALGDVFIWGEGTGEGILG 179

Query: 235  GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
            G      S +  ++D L+PK LE AV LDVQNIS G +HAALVTK+              
Sbjct: 180  GGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQA------------- 226

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
                       KL++ LS +N++ V+CGE+ TCA+T SG++YTWG       L+G     
Sbjct: 227  -----------KLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDV 275

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            SHW+P+ +   L+G+ VS ++CG WHTA+V+++GQLFT+GDG+FGVLGHG+ +++S P+E
Sbjct: 276  SHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPRE 335

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVDGERKL 473
            VESL+GL+    ACG WHTAA+V++M     S+    GK+FTWGD DKGRLGH D E KL
Sbjct: 336  VESLKGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKL 395

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
            +PTCV  LV+ +F Q +CG  LTV LT  G VYTMGSAV+GQLGN +A       VEGKL
Sbjct: 396  VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKL 455

Query: 534  KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
             + FV+ IS G+YHVAVLTS   VYTWGK ANG+LG GD++++ TPT VEAL+D+QV +V
Sbjct: 456  YKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNV 515

Query: 594  VCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINAS 653
            VCG + TAAIC+HK +S  DQS CS CR PF  RRK+HNCYNC L FC +CS+KK + AS
Sbjct: 516  VCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKAS 575

Query: 654  LTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTP- 712
            L PN  KP RVCDTCY+ L K   +      +  +   +     ++ E+++    A    
Sbjct: 576  LAPNGNKPYRVCDTCYSKLTKGLETDMHFSAKRAA--TVPGFSDTIEEDLETRSNAQLSR 633

Query: 713  -SRGQSFTSKQSRNVERKPGECLES--ASSLSSGLQRWGQVSCPIRFK-THCHEKSVEPT 768
             S  +SF    SR  ++       S   S + +G   W  ++    F       K     
Sbjct: 634  LSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSA 693

Query: 769  PIPKTQMSTH--SPL----------LRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRL 816
             +P +++ +   SP+              +LG    P    V  D   +N  L++EV  L
Sbjct: 694  SVPGSRIVSRATSPISRRTSPPRSTTPTPTLGGLTSP---RVPTDGKPTNDALSQEVLNL 750

Query: 817  RDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI 876
            R Q  +L ++ Q+   +++   ++++EA S+A EE  KCKAAKE+IK+L  +L  ++E++
Sbjct: 751  RSQVESLTRKSQLLELELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLKGMAERL 810

Query: 877  --SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRE-LC 933
               AAK  K      LPP       P + +P D    ++ S     S+  + + G   L 
Sbjct: 811  PGGAAKNTK------LPPL------PGISIPSDISSLAMESVGSPSSSGEQIINGHNGLL 858

Query: 934  HDNSSGSVEDSKVARTEPQQKGTKAS------KLEYAEQYEPGIYITFTTLPSGQKGLKR 987
              N   SV + K +  E  + G++          E+ EQ EPG+YIT T LP G + LKR
Sbjct: 859  ASNGPSSVRN-KTSHPEVGKNGSRPPDAESCHDAEWVEQDEPGVYITLTALPGGARDLKR 917

Query: 988  VRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            VRFSR+RF+E  AE+WW+EN+  VYQ+Y +
Sbjct: 918  VRFSRKRFSETQAEQWWQENRARVYQQYNV 947


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 801

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 357/822 (43%), Positives = 478/822 (58%), Gaps = 93/822 (11%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP+LL+S+ +LDVQ+I+ G KHAA+VTK+G+VF WGE   GRLGHK +  VS PK+++ L
Sbjct: 14   LPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKIIDSL 73

Query: 312  SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            +   +++++ G   TCA++ SGE+Y WG   H       +  RS W P KL  T DG+ V
Sbjct: 74   ASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISV 133

Query: 372  SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            +K+ACG+WHTAIVS++G+LFTYG GTFGVLGHG+ ++V QPKEVESLRGL+VKSVACGPW
Sbjct: 134  AKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVACGPW 193

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
            HTAAIV+      KSNA GGKLFTWG+A   +LGH D + KL+PT V  L+D DF Q SC
Sbjct: 194  HTAAIVETS-GTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQVSC 252

Query: 492  GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            G            V+T+GS  HGQLGNP++    I +VEG LK EFVK ISSG+ HVAVL
Sbjct: 253  G-----------VVFTIGSKDHGQLGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVL 301

Query: 552  TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            T  G V+TWGK   GQLGLGD  +R  PT VEAL D+QV+S+VC S+ TA IC+H  IS 
Sbjct: 302  TMNGKVFTWGKGTEGQLGLGDYLDRTFPTLVEALEDKQVDSIVCSSNFTAVICVHGEISS 361

Query: 612  GDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNH 671
             D + CS CR+ F F RKKHNCYNCG  FC++CS+ K+  A+L P+K K  RVCD C+N 
Sbjct: 362  KD-TVCSSCRLAFRFTRKKHNCYNCGSMFCNSCSSNKVQRATLAPDKSKRCRVCDACFNE 420

Query: 672  LQKITHSGRLL---KQENQSP-RNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVE 727
            L K    G++    K + + P          LS  +KE    +   +  S  S   RN  
Sbjct: 421  LNKTAEHGKMSCESKIQKEPPLTETRTYTPKLSRMLKEANFIM--EKMGSIRSPNQRN-- 476

Query: 728  RKPGECLESASSLSSGLQRWGQVSCPIRFK------THCHEKSVEPTPIPKTQMSTHSPL 781
                   ESA+      QRWGQV CP +FK      +HC     +P  I +     + P+
Sbjct: 477  ------QESATLNQMQKQRWGQVECPDQFKCARDNISHCLTSKKQPVDIGRIGR-MNDPV 529

Query: 782  LRKISLGSNFIPIASTVEKDLSESN---KMLNEEVQRLRDQARNLEKQCQIGNQKVQECQ 838
             +K +      P+  T +K   E +   K++ EEV++L+ Q   L ++C+  + KVQ  +
Sbjct: 530  SQKTAA-----PLTRTTDKRRKEQDLIEKIMLEEVKQLQAQVTTLAEECRHRSLKVQLYK 584

Query: 839  QKIEEAWSLAREEAEKCKAAKEIIKAL--------AVRLHTLSEKISAA-----KEAKEG 885
            +K+EE W +AR+EA KC AAKEIIK L         VR  +   K+  +     K A+  
Sbjct: 585  RKLEETWLIARDEATKCNAAKEIIKILTNQNFSDTVVRNLSSEPKVLCSMQHLCKNAERN 644

Query: 886  VDAN-------------LPPKLD----TDKHPEVKLPKDR----KVD---SLCSSPIVFS 921
              +N             +P   D    T K P +   +D+    +VD   +  S+ +V  
Sbjct: 645  ALSNKLLDDLELDDSRIVPDPPDKTPVTGKIPPLNSIRDQHNIEEVDMQSTTSSNTVVAD 704

Query: 922  NKLKSVYGRELCHDNSSGSVE---DSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTL 978
            +      GR     NSS   +   DS VA T+              EQ E G+YI+  T 
Sbjct: 705  DSAVHQNGRRA--SNSSRGYDGGTDSTVAPTDSSG---------MIEQIERGVYISVVTS 753

Query: 979  PSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEY 1020
            P G+KG+K +RFSR+ F E  A++WWEEN+  V+ KY   EY
Sbjct: 754  PDGKKGIKSIRFSRKHFGETEAQKWWEENESRVFAKYNSMEY 795


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
            distachyon]
          Length = 1007

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 336/830 (40%), Positives = 484/830 (58%), Gaps = 72/830 (8%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV +WGE  +  D+  + +GS +   ++ D L+PK LES V+LDVQ IS G++H AL 
Sbjct: 213  LGDVYVWGE--VWTDVIPS-EGSSNLVCSKTDVLIPKPLESDVVLDVQQISCGSRHIALT 269

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH  + D+S PKLVE L+  NV+ ++CGEF TCA+T SG++Y 
Sbjct: 270  TRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGDLYN 329

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  ++ A L+G     SHWLP+++   L+G++V  VACG WH+A+  +SG++FT+GDGT
Sbjct: 330  WGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVFTFGDGT 389

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FG LGHGN +NV+ PKEVESL G +   VACG WH+AAIV+    +   N +  KLFTWG
Sbjct: 390  FGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVET-TSQTGVNMVSRKLFTWG 448

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH D E +L+PT V  LVD +F Q +CG  +T+ L   G V+TMGS+ +GQLG
Sbjct: 449  DGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQLG 508

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            NPKA  +    V+ KL  E V+ IS GSYHVAVLTS   VYTWG  ANG+LG G  ++++
Sbjct: 509  NPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHGGIEDKK 568

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
             PT V+AL+DR V+S+ CGS+ T  IC+HK +S  DQS CS CR PFGF RK+HNCYNCG
Sbjct: 569  KPTIVDALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNCG 628

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
            L  C ACS++K++ A+L P  GKP RVCD+C+  L K   SG      + SP N  ++  
Sbjct: 629  LVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKL-KAADSG------SNSPYNKKSVIT 681

Query: 698  SLSEEVKE--EKGALTPSRGQSFTSKQSRNVERKPGECLESASSLS---------SGLQR 746
              S ++KE  E+  + PSR  +            P E ++ A + S         + + R
Sbjct: 682  RRSVDIKEKSERPDIRPSRLATAA----------PAEPMKHADTKSVRNDVKPDPTTMAR 731

Query: 747  WGQ-VSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSES 805
              Q +S P        +KS  P+P      +T SPL  K    S+   +  T+E      
Sbjct: 732  APQALSVPTTVSPAQPKKS-NPSP------ATVSPLAIKSDTKSDTDGMKKTIE------ 778

Query: 806  NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKAL 865
               LN+E+ +L+ Q   L+++C++ ++++Q+ +++ + A SLA EE+ +  A  + ++ L
Sbjct: 779  --TLNQELSKLQTQVTKLKQKCEVQDEQLQKSEKRAKSAASLASEESARRNAVLDFVRFL 836

Query: 866  AVRLHTLSEKISA--------------------AKEAKEGVDANLPPKLDTDKHPEVKLP 905
               L  +++++                           EG+  +  P+L +    E+   
Sbjct: 837  DSELKGVADQVPTEFTDSIKTLQSHSEKFLTGQCSHPPEGIPGHDQPRLSSGGLHEIAHH 896

Query: 906  KDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAE 965
            +   + +L  S    S    S+     CH      +E +  A  +   K     +++  E
Sbjct: 897  RSASMGNLVLSQDGSSAAGISMTSESPCHR----LMESNGRAPGDFAPKYGTHGEVQLIE 952

Query: 966  QYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
            Q+EPG+Y+T   +  G K  KRVRFS+RRF E+ AE WW ENQ  V++KY
Sbjct: 953  QFEPGVYVTLIQMRDGTKVFKRVRFSKRRFAEQQAEEWWRENQERVFRKY 1002


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/674 (45%), Positives = 433/674 (64%), Gaps = 19/674 (2%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV IWGE +    +    D + +   T+ D LLPK LES V+LDV +I+ G +HAA
Sbjct: 234 DALGDVYIWGEVICDNLVKVGADKNANYLTTRADLLLPKPLESNVVLDVHHIACGVRHAA 293

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT++GE+F WGE   GRLGH V  DV  P+LVE L+  +V  V+CGEF TCA+T +GE+
Sbjct: 294 LVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMAGEL 353

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           +TWG   H A L+G     SHW+P+++   L+G++V+ V CG WHTA+V+T+ QLFT+GD
Sbjct: 354 FTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTTTRQLFTFGD 413

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           GTFGVLGHG+  NV+ P+EVESL GL+  +VACG WHTAA+V+++V +  ++   GKLFT
Sbjct: 414 GTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFT 473

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L++++F + +CG  LTVGLT  G+V TMGS V+GQ
Sbjct: 474 WGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQ 533

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP++  +    VE KL  E V+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD ++
Sbjct: 534 LGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIED 593

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+TPT VE L+DR V+ + CGS+ TAAICLHK +S  +QS CS CR  FGF RK+HNCYN
Sbjct: 594 RKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYN 653

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C +CS++K + A+L PN GKP RVCD+CY  L K+     L    N     +  L
Sbjct: 654 CGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYTKLNKV-----LEAAANNRRTTVPRL 708

Query: 696 QGSLSEEVKEEKGALTPSRGQSFTS--KQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
            G   + + + +  L+ S   S     KQ  +   K G+  ++ S +        Q+   
Sbjct: 709 SGENKDRLDKAEIRLSKSAMPSNLDLIKQLDSKAAKQGKKADTFSLVRPSQAPLLQLKDV 768

Query: 754 IRFKTHCHEKSVEPTPI--PKTQMS-THSPLLRKISLGSNFIPIAST--------VEKDL 802
           + F      ++V P PI  P    S + SP  RK S   +  P+ +T        +   L
Sbjct: 769 VLFSAVDLRRTV-PRPILTPSGVSSRSVSPFSRKPSPPRSATPVPTTSGLSFSKSIADSL 827

Query: 803 SESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEII 862
            ++N++LN+EV +LR Q  +L ++C++   ++Q+  +K++EA  +A EE+ K KAAKE+I
Sbjct: 828 KKTNELLNQEVLKLRGQVESLRERCELQELELQKSAKKVQEAMVVATEESAKSKAAKEVI 887

Query: 863 KALAVRLHTLSEKI 876
           K+L  +L  ++E++
Sbjct: 888 KSLTAQLKDMAERL 901



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 61/86 (70%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S   E+ L+L SV++II GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 46  DESSLIWISSSGERILKLASVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRT 87
           CKDKV+AE W  GL+A ISS +  R+
Sbjct: 106 CKDKVEAEVWIAGLKALISSGQGGRS 131



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+YIT   L  G + LKRVRFSRRRF E  AE WW EN+  VY++Y +
Sbjct: 1048 EWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAENWWSENREKVYERYNV 1103


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 305/680 (44%), Positives = 433/680 (63%), Gaps = 33/680 (4%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V       + D +V ++  + D LLPK LES ++LDV ++  G +HA+
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSD-TVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHAS 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ GEVF WGE   GRLGH    D   P+LVE L+  N+  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+PR++   L+G++V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHGN++++S P+EVESL GLK  +VACG WHTAAIV+++V +  +    GKLFT
Sbjct: 211 GSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV+TMG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP +  R   +V  K+  E V  ++ GSYHV+VLTS   V+TWGK ANG+LG GD ++
Sbjct: 331 LGNPNSDGRPC-LVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIED 389

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           ++ PT VEAL+DR V  + CG++ TAAICLHK +S  DQS CS CR PFGF RK+HNCYN
Sbjct: 390 QKVPTLVEALKDRSVRHIACGANFTAAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYN 449

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C+AC+++K + A+L PN GK  RVCD+C++ L+  + S    K+++ +P    +L
Sbjct: 450 CGLVHCNACTSRKALRAALAPNPGKLHRVCDSCFSKLKNASDSSSANKKKDLAP----HL 505

Query: 696 QGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIR 755
            G  + EV+  K  L PS      S  S+    K G+  ++ S L     R  QVS  ++
Sbjct: 506 SGESNGEVRVGKSIL-PSNMDMIRSLDSKAA--KQGKKTDALSFL-----RNPQVSSLMQ 557

Query: 756 FKTHCHEKSVEPT-PIPK----------TQMSTHSPLLRKISLGSNFIPIAST------- 797
            +       ++    +P+          T     SP  RK S   +  PI +T       
Sbjct: 558 LRDIAFSGGIDLNRSVPRAVRTSAVRSVTSSRAVSPFSRKSSPPRSTTPIPTTHGLSFSK 617

Query: 798 -VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCK 856
               +L ++N+ LN+EV+RLR Q  NL  +C+    ++ +  +K++EA +L  EE+ + K
Sbjct: 618 SATDNLVKTNEFLNQEVERLRAQVDNLRHRCEHHELELHKSAKKVQEAMTLVAEESARSK 677

Query: 857 AAKEIIKALAVRLHTLSEKI 876
           AAKE+IK+L  +L  ++E++
Sbjct: 678 AAKEVIKSLTAQLKDMAERL 697



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 42/58 (72%)

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + E+ EQYEPG+YIT TTL  G + LKRVRFSRRRF E  AE WW  N+  VY++Y +
Sbjct: 840  QAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNGNREKVYERYNV 897


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
            thaliana]
          Length = 1067

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 327/813 (40%), Positives = 475/813 (58%), Gaps = 44/813 (5%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV +WGE    G +    DG+ S    + D L P+ LES V+LDV  I  G +H ALV
Sbjct: 219  LGDVYVWGEVWTEGILP---DGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 275

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH + +D+S PKLVE L+  N+  V+CGE+ TC ++ SG++++
Sbjct: 276  TRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFS 335

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG   H   L+G     SHW+P+++   L+G++V  VACG WH+A+ + +G+LFT+GDG 
Sbjct: 336  WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGA 395

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FGVLGHGN ++VS PKEV+SL GLK   VAC  WHTAAIV++M     S +   KLFTWG
Sbjct: 396  FGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMS-SRKLFTWG 454

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH + E  LLPTCV+ L+D++F + +CG   TV LT  G V+TMG   HGQLG
Sbjct: 455  DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 514

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            N  +  +   +V+ +L  EFV+ I+ G++HVAVLTS   V+TWGK ANG+LG GD++++ 
Sbjct: 515  NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 574

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
            TPT VEALRDR V+S+ CGS+ T++IC+HK +S  DQS CS CR  FGF RK+HNCYNCG
Sbjct: 575  TPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCG 634

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
            L  C ACS+KK + A+L P  GKP RVCD CY+ L K   SG      +   RN+     
Sbjct: 635  LVHCHACSSKKALKAALAPTPGKPHRVCDACYSKL-KAAESG----YSSNVNRNVATPGR 689

Query: 698  SLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSS---GLQRWGQVSCPI 754
            S+   V+ ++     S+     +K S     +PG   ES+++ +S    LQ+   ++ P 
Sbjct: 690  SIDGSVRTDRETTRSSKVLLSANKNSVMSSSRPGFTPESSNARASQVPSLQQLKDIAFPS 749

Query: 755  RFKT--HCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIA------------STVEK 800
                  +  +  V PT  P   +              +  P A             +V  
Sbjct: 750  SLSAIQNAFKPVVAPTTTPPRTLVIGPSSPSPPPPPRSSSPYARRPSPPRTSGFSRSVID 809

Query: 801  DLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKE 860
             L ++N+++N+E+ +L  Q +NL+++C     +++  Q+  ++A  LA  ++ K KAA E
Sbjct: 810  SLRKTNEVMNQEMTKLHSQVKNLKQRCNNQGTEIERFQKAAKDASELAARQSSKHKAATE 869

Query: 861  IIKALAVRLHTLSEKIS---AAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSP 917
             +K++A +L  L EK+    +  EA E +++     L+ +K  E             +SP
Sbjct: 870  ALKSVAEQLKELKEKLPPEVSESEAFESINSQAEAYLNANKVSE-------------TSP 916

Query: 918  IVFSNKLKSVYGR--ELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITF 975
            +  S + +  Y +  E    NSS +   S       +   ++ S  E  EQ+EPG+Y+T+
Sbjct: 917  LTTSGQEQETYQKTEEQVPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEPGVYVTY 976

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
                +G K  +RVRFS++RF E  AE WW +N+
Sbjct: 977  EVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNK 1009


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/672 (44%), Positives = 428/672 (63%), Gaps = 22/672 (3%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V       + D +V ++  + D LLPK LES ++LDV ++  G +HA+
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSD-TVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHAS 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ GEVF WGE   GRLGH    D   P+LVE L+  N+  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+PR++   L+G++++ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHGN++++S P+EVESL GLK  +VACG WHTAAIV+++V +  +    GKLFT
Sbjct: 211 GSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV+TMG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP +  R   +VE K+  E V  I+ GSYHVAVLTS   V+TWGK ANG+LG GD ++
Sbjct: 331 LGNPNSDGRPC-LVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVED 389

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+ PT VEALRDR V  + CG++ TAAICLHK +S  DQS CS CR PFGF RK+HNCYN
Sbjct: 390 RKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYN 449

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C+AC+++K + A+L PN GK  RVCD+CY+ L+  + S         S ++L + 
Sbjct: 450 CGLVHCNACTSRKALRAALAPNPGKLHRVCDSCYSKLKNASSSA--------SKKDLASG 501

Query: 696 QGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQ-RWGQVSCPI 754
           + +    V +   +      +S  SK ++  ++           +SS LQ R    S   
Sbjct: 502 ESNGEARVGKSNLSSNMDMIRSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGA 561

Query: 755 RFKTHCHEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIPIAST--------VEKDLSE 804
                   ++V  TP  ++  ++   SP  RK S   +  P+ +T           +L +
Sbjct: 562 DLNRSAAPRAVR-TPAVRSVATSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLVK 620

Query: 805 SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKA 864
           +N++L++EV+RLR Q  +L  +C     ++ +  +K++EA +L  EE+ K KAAKE+IK+
Sbjct: 621 ANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAMTLVAEESAKSKAAKEVIKS 680

Query: 865 LAVRLHTLSEKI 876
           L  +L  ++E++
Sbjct: 681 LTAQLKDMAERL 692



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 43/58 (74%)

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + E+ EQYEPG+YIT TTL  G + LKRVRFSRRRF E  AE WW EN+  VY+KY +
Sbjct: 834  QAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYEKYNV 891


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
            sativus]
          Length = 958

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 323/832 (38%), Positives = 475/832 (57%), Gaps = 49/832 (5%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV +WGE  +  D+    DG+ SQ   + D L PK LE+ V+LDVQ I+ G +H ALV
Sbjct: 87   LGDVYVWGE--IWTDLV-LPDGTSSQIPVKNDVLTPKPLETNVVLDVQQIACGVRHIALV 143

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH ++ D S P LVE L+  +V  V+CGE+ TCA+T S ++YT
Sbjct: 144  TRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITSSNDLYT 203

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG     + ++G     SHW+P+++  +L+G++V  VACG WH+A+ +++G+L+T+GDGT
Sbjct: 204  WGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGT 263

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +GVLGHG+ ++V  P+EV+ L GL+   VACG WHTAAIV++M  +  SN    KLFTWG
Sbjct: 264  YGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVM-SQTGSNMSSRKLFTWG 322

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH + E  LLPTCV+ L+D++F Q +CG  +TV LT  G V+TMG   +GQLG
Sbjct: 323  DGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAYGQLG 382

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            NP +      +V+ +L  EFV+ IS G+YH  VLTS   V++WG+ +NG+LG GD ++R+
Sbjct: 383  NPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRK 442

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
             PT +EAL+DR V+S+ CGS+ TA+IC+HK +S  DQS C+ CR  FGF RK+HNCYNCG
Sbjct: 443  APTLIEALKDRHVKSISCGSNFTASICIHKWVSGADQSVCTGCRQAFGFTRKRHNCYNCG 502

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
            L  C +CS+KK + A+L P  GKP RVCD+CY  L+                R L   + 
Sbjct: 503  LVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLKSAEAGNNFCVN-----RKLTANRR 557

Query: 698  SLSEEVKEEKGALTPSR---------GQSFTSKQSRNVERKPGECLESASSLSSGLQRWG 748
            S   + + ++G + PSR          +    K  R   R     +  AS + S LQ+  
Sbjct: 558  STDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQVPS-LQQLK 616

Query: 749  QVSCPIRFKTHCHEKS----VEPTPIPKTQMSTHSPLLRKISLGSNFIPIAS-TVEKDLS 803
             ++ P       +         P+P P       SP  R+ S   +  P+ S +V   L 
Sbjct: 617  DIAFPSSLSAIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTTPVFSKSVIDSLK 676

Query: 804  ESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIK 863
            +SN+ L ++  +L+ + +NL+++C I   ++Q  Q+   EA SL  EE+ KCK AK+++ 
Sbjct: 677  KSNETLVQDKSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEESSKCKIAKKLVT 736

Query: 864  ALAVRLHTLSEKISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNK 923
             +  +L  + +K+       E  D      +       + + +  K  SL +S    +N 
Sbjct: 737  TITEQLKEMKDKL-----PPEIWDGENFKSMYAQAEAFLNMVETSKTSSLPTSHEKTNNL 791

Query: 924  LKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKA--------------------SKLEY 963
                 G     D+SS  +ED    R +  Q+   +                     + + 
Sbjct: 792  TALNNGSTPSLDDSSKRIEDDGSGRKDLTQENVNSLLESKKTSENGSRSPLSSTEGEKQV 851

Query: 964  AEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             EQ+EPG+Y T   L +G K  KRVRFS+RRF E+ AE WW +N+  + ++Y
Sbjct: 852  IEQFEPGVYATLVVLSNGTKIFKRVRFSKRRFDEQQAEDWWSKNKDRLLKRY 903


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1043

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 325/824 (39%), Positives = 485/824 (58%), Gaps = 55/824 (6%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV +WGE    G +    DG+VS+   + D L P+ LES V+LDV  I  G +H ALV
Sbjct: 210  LGDVYVWGEVWTEGIL---PDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH + +D+S PKLVE L+  N+  V+CGE+ TC ++ SG++++
Sbjct: 267  TRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFS 326

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG   H   L+G     SHW+P+++   L+G++V  VACG WH+A+ + +G+LFT+GDG 
Sbjct: 327  WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGA 386

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FGVLGHGN ++VS PKEV+SL GLK   VAC  WHTAAIV++M  +  ++    KLFTWG
Sbjct: 387  FGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVM-GQTGTSMSSRKLFTWG 445

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH + E  LLPTCV+ L+D++F + +CG   TV LT  G V+TMG   HGQLG
Sbjct: 446  DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            N  +  +   +V+ +L  EFV+ I+ G +HVAVLTS   V+TWGK ANG+LG GD++++ 
Sbjct: 506  NSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 565

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
            TPT VEALRDR V+S+ CGS+ T++IC+HK +S  DQS CS CR  FGF RK+HNCYNCG
Sbjct: 566  TPTCVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCG 625

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
            L  C ACS+KK + A+L P  GKP RVCD CY+ L K   SG      +   RN+     
Sbjct: 626  LVHCHACSSKKALKAALAPTPGKPHRVCDACYSKL-KAAESG----YSSNVNRNVATPGR 680

Query: 698  SLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSS---GLQRWGQVSCPI 754
            S+   V+ +K     S+     +  S     +PG   +S+++ +S    LQ+   ++ P 
Sbjct: 681  SIDGSVRSDKETTRSSKVLLSANTNSVRSSSRPGLTPDSSNARASQVPSLQQLKDIAFPS 740

Query: 755  RFKT--HCHEKSVEPTPIPKTQM-------------STHSPLLRKIS--LGSNFIPIAST 797
                  +  +  + PT  P   +              + SP  R+ S    S F   + +
Sbjct: 741  SLSAIQNAFKPVIAPTTTPPRPLVVGPSSPSPPPPPRSSSPYARRTSPPRTSGF---SRS 797

Query: 798  VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKA 857
            V   L ++N+++N+E+ +L+ Q R     C     +++  Q+  ++A+ LA +++ K KA
Sbjct: 798  VIDSLKKTNEVMNQEMTKLQSQQR-----CNNQGTEIERFQKAAKDAFELAAKQSSKHKA 852

Query: 858  AKEIIKALAVRLHTLSEKIS---AAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLC 914
            A E +K++A +L  L +K+    +  EA E +++     L+ ++  E  L          
Sbjct: 853  ATEALKSVAEQLKELKDKLPPEVSESEAFESINSQAEAYLNANEALETSL---------- 902

Query: 915  SSPIVFSNKLKSVYGRELCHDNSSGSVEDSKVARTEP--QQKGTKASKLEYAEQYEPGIY 972
               +  S + +  Y +     +S+ S+ ++  +   P  +   ++ S  E  EQ+EPG+Y
Sbjct: 903  ---LTTSGQEQETYQKTEEQVSSNSSITEASNSSRPPSTEASSSRTSGKESKEQFEPGVY 959

Query: 973  ITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYG 1016
            +T+    +G K  +RVRFS++RF E  AE WW +N+  + + YG
Sbjct: 960  VTYEVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNKDRLLKCYG 1003


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 302/695 (43%), Positives = 430/695 (61%), Gaps = 19/695 (2%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE      +    D ++ ++  + D LLPK LES ++LDV ++  G +HAA
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSD-TIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAA 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ G+VF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+P+++   LDG+ V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHGNL ++S PKEVESL GLK  +VACG WHTAAIV+++V    S+   GKLFT
Sbjct: 211 GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTV LT  GKV +MG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP +  R   +VE ++  E V  ++ GSYHVAVLT    V+TWGK ANG+LG GD ++
Sbjct: 331 LGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIED 390

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+ PT VEAL+DR V  + CG++ TAAICLHK +S  DQS CS C+ PFGF RK+HNCYN
Sbjct: 391 RKVPTQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYN 450

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C+AC+++K + A+L PN GKP RVCD+C+  L+    S    K+++     + +L
Sbjct: 451 CGLVHCNACTSRKALRAALAPNPGKPYRVCDSCFLKLKNALDSDSFNKRKDI----VSHL 506

Query: 696 QGSLSEEVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
            G  + + K  K  L+ +    +S  SK +R  ++           +SS LQ        
Sbjct: 507 AGESNGDTKASKTILSSNMDIIRSLDSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSG 566

Query: 754 IRFKTHCHEKSVEPTPIPKTQMS-THSPLLRKISLGSNFIPIAST--------VEKDLSE 804
                    ++V  + +     S   SP  RK S   +  P+ +T           +L++
Sbjct: 567 SADMNRSVPRAVRTSAVRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAK 626

Query: 805 SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKA 864
           +N++LN+E+ RL  Q  NL  +C+    ++ +  +K++EA +L  EE+ K KAAKE+IK+
Sbjct: 627 TNELLNQEIDRLHAQVDNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKS 686

Query: 865 LAVRLHTLSEKISAAK---EAKEGVDANLPPKLDT 896
           L  +L  ++E+I   +   +  E    ++P  +D+
Sbjct: 687 LTAQLKDMAERIPPEQGTYDVSEAKPVHVPNGIDS 721


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 306/687 (44%), Positives = 436/687 (63%), Gaps = 32/687 (4%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WGE +    +    D +V ++  + D LLPK LES ++LDV ++  G KHAALVTK
Sbjct: 36  DVYVWGEVICDNTVRVGPD-TVIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTK 94

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            GEVF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+YTWG
Sbjct: 95  NGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWG 154

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              H   L+G     SHW+P+++   L+G +V+ V+CG WHTA+V++ GQLFT+GDGTFG
Sbjct: 155 DGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFG 214

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           VLGHGN ++ S P+EVESL GLK  +VACG WHTAA+V+++V +  S+   GKLFTWGD 
Sbjct: 215 VLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDG 274

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  G++ +MG+ V+GQLGNP
Sbjct: 275 DKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNP 334

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           ++  +   +VE  + E  V+ ++ GSYHVAVLT+   V+TWGK ANG+LG GD ++R+ P
Sbjct: 335 RSDGKLPCLVEDIMGEHVVQ-VACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIP 393

Query: 580 TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
           T VEALRDR V  + CGS+ T+AIC HK +S  +QS C+ CR PFGF RK+HNC+NCGL 
Sbjct: 394 TLVEALRDRGVRHIACGSNFTSAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLV 453

Query: 640 FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL 699
            C+AC++ K++ A+L PN  KP RVCD+C+  L    +S  + K++   PR+     G  
Sbjct: 454 HCNACTSHKVLRAALAPNPAKPYRVCDSCFMKLNSAAYSSAVNKKKEAVPRH----SGES 509

Query: 700 SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTH 759
           + + K  + A+ PS      S  S+    K G+  ++ S L     R  Q+S  ++ K  
Sbjct: 510 NNDAKLAR-AIVPSNLDMIRSLDSKAA--KQGKKTDALSFL-----RTPQMSSLLQLKDI 561

Query: 760 CHEKSVE-----PTPIPKTQMSTH-----SPLLRKISLGSNFIP--------IASTVEKD 801
                ++     P  +  +  S +     SP  RK S   +  P        IA T    
Sbjct: 562 ALSGGIDMNKSVPRAVRTSVRSLNSSRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADS 621

Query: 802 LSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEI 861
           L+++N+ML++EV+RLR Q  NL  +C++   ++Q+  +K++EA S+  EE+ K KAAKE+
Sbjct: 622 LAKTNEMLSQEVERLRAQVDNLRHRCELQELELQKSAKKVQEAMSMVSEESAKSKAAKEV 681

Query: 862 IKALAVRLHTLSEKISAAKEAKEGVDA 888
           IK+L  +L  ++E++   + A +G +A
Sbjct: 682 IKSLTAQLKDMAERLPPDQGAYDGSEA 708



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 23/29 (79%)

Query: 962 EYAEQYEPGIYITFTTLPSGQKGLKRVRF 990
           E+ EQYEPG+YIT TTL  G + LKRVRF
Sbjct: 841 EWIEQYEPGVYITLTTLRDGTRDLKRVRF 869


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 347/901 (38%), Positives = 503/901 (55%), Gaps = 77/901 (8%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S  +EK L+L+SV+ II GQRT  F+   +P++   SFS+IY  GERSLDLI
Sbjct: 90  DETKLIWISHGREKNLKLSSVSHIIPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLI 149

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYI-RRKHNLGLLEDA 120
           CKD+ + E WF  L+A IS   R R        RG     +     I   + N G LE A
Sbjct: 150 CKDQAEVEVWFSSLKALISRGERIR--------RGKSDLSNESVDLIPNDRPNAGTLEFA 201

Query: 121 TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
           + +++ R                   S+ S S  S+ S S    N+              
Sbjct: 202 SSIARGR------------------FSFESVSHESTSSCSRSDTNMP------------- 230

Query: 181 NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDV---MIWGEGVLGGDIGGAV 237
                      T C       + + ++ S +    D ++ +    IWGE  + G+   + 
Sbjct: 231 ---------VRTSCGDGSRVSVSSVSHSSSVGSGLDDIESLGDVYIWGEVWVDGN---SS 278

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG  S    + D L PK LES V+LDV  I  G +H ALVT++GEVF WGE   GRLGH 
Sbjct: 279 DGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHG 338

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
              D   P LVE L+  NV  V+CGE+ +CA++ SG+++TWG   HGA L+G     S+W
Sbjct: 339 FEKDFGRPHLVESLAITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYW 398

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           +P+++   L+G++V  VACG WH+A+ +++G+LFT GDG FGVLGHG+  +V+ PKEV+ 
Sbjct: 399 IPKRVSGPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQL 458

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L G K   VACG WH+AAI+++M     SN    +LFTWGD D+ RLGHV+ E  L PTC
Sbjct: 459 LSGHKAIKVACGVWHSAAIIEVM-GPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTC 517

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           V  + +++F Q +CG  +TV LT  G V+TMG   +GQLGNP +  +   +V GKL  EF
Sbjct: 518 VAAVAEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEF 577

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V+ IS G+ HVAVLTS   +YTWG+ ANG+LG GD+ ++++PT VEAL+DR ++++ CGS
Sbjct: 578 VEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGS 637

Query: 598 SITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPN 657
           + T+ ICLHK +S  DQS CS CR PFGF RK+ NCY+CGL +C  CS+KK   A+L P 
Sbjct: 638 TFTSCICLHKWVSGVDQSVCSDCRQPFGFTRKRRNCYHCGLVYCHPCSSKKASKAALAPT 697

Query: 658 KGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQS 717
             KP RVCD CY  L+    +    +  ++   ++   +     EV+  +  L P     
Sbjct: 698 PSKPHRVCDACYAKLKGSDSASNFNRDISRPSSSIYGRESFHRGEVRSSRVLLPP----- 752

Query: 718 FTSKQSRNVE---RKPGECLES---ASSLSSGLQRWGQVSCPIRFKT--HCHEKSVEPTP 769
            T +  + +E    KPG   +S   A+ + + LQ    VS PI   +  + ++  ++P+ 
Sbjct: 753 -TIEPVKYLEIRTNKPGSTHDSIVRAAQVPTSLQ-LKDVSFPISLSSVQNVYKPVIQPSQ 810

Query: 770 IPKTQMSTHSPLLRKISLGSNFIP------IASTVEKDLSESNKMLNEEVQRLRDQARNL 823
            P    S     +   +      P       + ++  +L + N  LN+EV + +++ +NL
Sbjct: 811 PPTPPTSATPIPMSPYARRPPSPPRSTSPGFSRSLIDNLRKKNDHLNQEVTKWQNKNQNL 870

Query: 824 EKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKEAK 883
           E++  + + K+QE Q+ IEEA S   EE+ K + AKE IK+LA +L  ++EK+      K
Sbjct: 871 EQKSDMQDMKIQELQKNIEEAMSQFGEESSKLREAKEFIKSLADKLREVTEKLPPEIPDK 930

Query: 884 E 884
           E
Sbjct: 931 E 931


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 304/695 (43%), Positives = 435/695 (62%), Gaps = 40/695 (5%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V       + D +V ++  + D LLPK LES ++LDV ++  G +HA+
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSD-TVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHAS 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ GEVF WGE   GRLGH    D   P+LVE L+  N+  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+PR++   L+G++++ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHG+L+++S P+EVESL GLK  +VACG WHTAAIV+++V +  +    GKLFT
Sbjct: 211 GSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV+TMG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGN  +  R   +VE K+  E V  I+ GSYHVAVLTS   V+TWGK ANG+LG GD ++
Sbjct: 331 LGNLNSDGRPC-LVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIED 389

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+ PT VEALRDR V  + CG++ TAAICLHK +S  DQS CS CR PFGF RK+HNCYN
Sbjct: 390 RKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYN 449

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C+AC+++K + A+L P+ GK  RVCD+CY+ L+  + S     +++ +P      
Sbjct: 450 CGLVHCNACTSRKALRAALAPSPGKLHRVCDSCYSKLKNASSSA---NKKDLAP------ 500

Query: 696 QGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIR 755
            G  + E +  K  L      S      R+++ K  +  +   +LS    R  QVS  ++
Sbjct: 501 -GESNGEARVGKSIL------SSNMDMIRSLDSKAAKQGKKTDALS--FLRNPQVSSLLQ 551

Query: 756 FKTHCHEKSVEP----------TPIPKTQMSTH--SPLLRKISLGSNFIPIAST------ 797
            +        +P          TP  ++  S+   SP  R+ S   +  P+ +T      
Sbjct: 552 LRDIAFSGGADPNRPAVPRAARTPAARSVTSSRAVSPFSRRSSPPRSTTPVPTTHGLSLS 611

Query: 798 --VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKC 855
                +L ++N++L++EV+RLR Q  +L  +C     ++ +  +K++EA +L  EE+ K 
Sbjct: 612 KSATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAMTLVAEESAKS 671

Query: 856 KAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANL 890
           KAAKE+IK+L  +L  ++E++     A +  +A L
Sbjct: 672 KAAKEVIKSLTAQLKDMAERLPPEHGAYDFNEAKL 706



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 43/58 (74%)

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + E+ EQYEPG+YIT TTL  G + LKRVRFSRRRF E  AE WW EN+  VY+KY +
Sbjct: 834  QAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYEKYNV 891


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/681 (44%), Positives = 430/681 (63%), Gaps = 40/681 (5%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V       + D +V ++  + D LLPK LES ++LDV ++  G +HA+
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSD-TVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHAS 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ GEVF WGE   GRLGH    D   P+LVE L+  N+  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+PR++   L+G++++ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHG+L+++S P+EVESL GLK  +VACG WHTAAIV+++V +  +    GKLFT
Sbjct: 211 GSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV+TMG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGN  +  R   +VE K+  E V  I+ GSYHVAVLTS   V+TWGK ANG+LG GD ++
Sbjct: 331 LGNLNSDGRPC-LVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIED 389

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+ PT VEALRDR V  + CG++ TAAICLHK +S  DQS CS CR PFGF RK+HNCYN
Sbjct: 390 RKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYN 449

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C+AC+++K + A+L P+ GK  RVCD+CY+ L+  + S     +++ +P      
Sbjct: 450 CGLVHCNACTSRKALRAALAPSPGKLHRVCDSCYSKLKNASSSA---NKKDLAP------ 500

Query: 696 QGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIR 755
            G  + E +  K  L      S      R+++ K  +  +   +LS    R  QVS  ++
Sbjct: 501 -GESNGEARVGKSIL------SSNMDMIRSLDSKAAKQGKKTDALS--FLRNPQVSSLLQ 551

Query: 756 FKTHCHEKSVEP----------TPIPKTQMSTH--SPLLRKISLGSNFIPIAST------ 797
            +        +P          TP  ++  S+   SP  R+ S   +  P+ +T      
Sbjct: 552 LRDIAFSGGADPNRPAVPRAARTPAARSVTSSRAVSPFSRRSSPPRSTTPVPTTHGLSLS 611

Query: 798 --VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKC 855
                +L ++N++L++EV+RLR Q  +L  +C     ++ +  +K++EA +L  EE+ K 
Sbjct: 612 KSATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAMTLVAEESAKS 671

Query: 856 KAAKEIIKALAVRLHTLSEKI 876
           KAAKE+IK+L  +L  ++E++
Sbjct: 672 KAAKEVIKSLTAQLKDMAERL 692



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 43/58 (74%)

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + E+ EQYEPG+YIT TTL  G + LKRVRFSRRRF E  AE WW EN+  VY+KY +
Sbjct: 834  QAEWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYEKYNV 891


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
            finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 326/813 (40%), Positives = 470/813 (57%), Gaps = 49/813 (6%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV +WGE    G +    DG+ S    + D L P+ LES V+LDV  I  G +H ALV
Sbjct: 210  LGDVYVWGEVWTEGIL---PDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALV 266

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH + +D+S PKLVE L+  N+  V+CGE+ TC ++ SG++++
Sbjct: 267  TRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFS 326

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG   H   L+G     SHW+P+++   L+G++V  VACG WH+A+ + +G+LFT+GDG 
Sbjct: 327  WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGA 386

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FGVLGHGN ++VS PKEV+SL GLK   VAC  WHTAAIV++M     S +   KLFTWG
Sbjct: 387  FGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMS-SRKLFTWG 445

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH + E  LLPTCV+ L+D++F + +CG   TV LT  G V+TMG   HGQLG
Sbjct: 446  DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            N  +  +   +V+ +L  EFV+ I+ G++HVAVLTS   V+TWGK ANG+LG GD++++ 
Sbjct: 506  NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 565

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
            TPT VEALRDR V+S+ CGS+ T++IC+HK +S  DQS CS CR  FGF RK+HNCYNCG
Sbjct: 566  TPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCG 625

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQG 697
            L  C ACS+KK + A+L P  GKP RVCD CY+ L K   SG      +   RN+     
Sbjct: 626  LVHCHACSSKKALKAALAPTPGKPHRVCDACYSKL-KAAESG----YSSNVNRNVATPGR 680

Query: 698  SLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSS---GLQRWGQVSCPI 754
            S+   V+ ++     S+     +K S     +PG   ES+++ +S    LQ+   ++ P 
Sbjct: 681  SIDGSVRTDRETTRSSKVLLSANKNSVMSSSRPGFTPESSNARASQVPSLQQLKDIAFPS 740

Query: 755  RFKT--HCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIA------------STVEK 800
                  +  +  V PT  P   +              +  P A             +V  
Sbjct: 741  SLSAIQNAFKPVVAPTTTPPRTLVIGPSSPSPPPPPRSSSPYARRPSPPRTSGFSRSVID 800

Query: 801  DLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKE 860
             L ++N+++N+E+ +L  Q R     C     +++  Q+  ++A  LA  ++ K KAA E
Sbjct: 801  SLRKTNEVMNQEMTKLHSQQR-----CNNQGTEIERFQKAAKDASELAARQSSKHKAATE 855

Query: 861  IIKALAVRLHTLSEKIS---AAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSP 917
             +K++A +L  L EK+    +  EA E +++     L+ +K  E             +SP
Sbjct: 856  ALKSVAEQLKELKEKLPPEVSESEAFESINSQAEAYLNANKVSE-------------TSP 902

Query: 918  IVFSNKLKSVYGR--ELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITF 975
            +  S + +  Y +  E    NSS +   S       +   ++ S  E  EQ+EPG+Y+T+
Sbjct: 903  LTTSGQEQETYQKTEEQVPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEPGVYVTY 962

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQ 1008
                +G K  +RVRFS++RF E  AE WW +N+
Sbjct: 963  EVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNK 995


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 332/854 (38%), Positives = 498/854 (58%), Gaps = 69/854 (8%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV IWGE  +  D G   DGSVS   T+ D L PK LES V+LDV  IS G +H ALV
Sbjct: 224  LGDVYIWGE--IWSD-GVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALV 280

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH +    + PKLVE L+  N+  V+CGE+ TCA++ SG+++T
Sbjct: 281  TRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFT 340

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  ++ + L+G     SHW+P+++   L+G++V  +ACG WH+A+ +++G+LFT+GDGT
Sbjct: 341  WGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGT 400

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FG LGHG+ ++VS PKE++SL GLK   VACG WHTAAIV++M  +  SN    KLFTWG
Sbjct: 401  FGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVM-SQSGSNISSRKLFTWG 459

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH + +  LLPTCV+ L+D++F Q +CG  +TV LT  G V+TMG + +GQLG
Sbjct: 460  DGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            NP +  +   +V+ +L  EFV+ IS G+YH AVLTS   V+TWG+ ANGQLG GD+++R+
Sbjct: 520  NPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRK 579

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
             PT VEAL++R V+++ CG++ T++IC+HK +S  DQS CS CR  FGF RK+HNCYNCG
Sbjct: 580  LPTLVEALKERHVKNLSCGANFTSSICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCG 639

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRL--LKQENQSPRNLLNL 695
            L  C  CS+KK + A+L P  GKP RVCD+CY  L K   SG    + ++   PR  +++
Sbjct: 640  LVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKL-KAAESGNTSAINRKTTVPRRSMDI 698

Query: 696  QGSLSE-EVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPI 754
            +  +   E +  +  L+P      T++  + +E K G+  + A S ++ + R  QV   +
Sbjct: 699  REKMERGEPRFSRILLSP------TTEPIKYLEIKSGK--QGAQSEAASIVRASQVPSLL 750

Query: 755  RFKTHCHEKSV-------EPTPIPKTQMSTH-----------SPLLRKISLGSNFIP-IA 795
              K      S        +P P    Q++ +           SP  R+ S   +  P  +
Sbjct: 751  PLKDVAFPSSPSTLQNAWKPAPPIVPQLTVNSSQPAANSRPSSPYSRRPSPPRSASPGFS 810

Query: 796  STVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKC 855
              V   L ++N++  +++ ++++Q + L+K+C     ++   + + + A  LA  E+ K 
Sbjct: 811  RGVIDSLKKTNEIFKQDMTKMQNQIKTLKKKCDNQELEIHNLENRAKGAAKLAAAESSKS 870

Query: 856  KAAKEIIKALAVRLHTLSEKISA---AKEAKEGVDANLPPKLDTDKHPE-VKLPKDRKVD 911
              A E  K++   L  + +++       +  + +D+ +   L+  +  E   LP+    D
Sbjct: 871  NIAMEFAKSITKELKEMMQQLPPEGRETDTLKAIDSKIEAFLEKIRASESSSLPESVGSD 930

Query: 912  ---SLCSSPIV--FSNKL-KSVYG-----RELCHDNSSGSVED-------SKVARTEPQQ 953
               +  SSP+    SN L K + G     R      + GSV +       S +    P++
Sbjct: 931  YQNASASSPLTSDSSNLLEKRMEGQTDTVRATAMSRTDGSVPEESSRSSVSHLTEAVPRE 990

Query: 954  KGTKASKL------------EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAE 1001
                 S+             E  EQ+EPG+Y+T    P+G K  KRV+FS+RRF E+ AE
Sbjct: 991  SSENESRTPTASIKRTESQKEIIEQFEPGVYVTVILRPNGVKIFKRVKFSKRRFQEQQAE 1050

Query: 1002 RWWEENQVVVYQKY 1015
             WW+EN+  + +KY
Sbjct: 1051 VWWKENKDRLLKKY 1064



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 62/92 (67%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S  +EK L+L+SV +II GQRT  F+   +P++   SFS++Y NGERSLDLI
Sbjct: 46  DETSLIWLSHGQEKNLKLSSVLRIIPGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLRE 93
           CKDKV+AE W  GL+A I      RT S + +
Sbjct: 106 CKDKVEAEVWLAGLKALIGKNHNRRTRSNISD 137


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 298/672 (44%), Positives = 431/672 (64%), Gaps = 17/672 (2%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WGE +    +    D +V ++  + D LLPK LES ++LDV ++  G KHAALVTK
Sbjct: 51  DVYVWGEVICENSVRAGSD-AVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTK 109

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            GEVF WGE   GRLGH    D   P LVE L+  NV  V+CGEF TCA+T +GE+YTWG
Sbjct: 110 NGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWG 169

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              H   L+G     SHW+P+++   L+G +V+ V+CG WHTA+++++GQLFT+GDGTFG
Sbjct: 170 DGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFG 229

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           VLGHGN +++  P+EVESL GLK  +VACG WHTAA+V+++V +  S+   GKLFTWGD 
Sbjct: 230 VLGHGNRESIPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDG 289

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           DK RLGH D E ++ PTCV  L+D+DF + +CG  LTVGLT  G+V+ MG+ V+GQLGNP
Sbjct: 290 DKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNP 349

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           ++  +   +VE  + E  V+ ++ GSYHVAVLT    V+TWGK ANG+LG GD ++R+ P
Sbjct: 350 RSDGKLPCLVEDIMGENVVQ-VACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIP 408

Query: 580 TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
           T VE LRDR V  + CG++ TAAIC  K +S  +QS C+ CR PFGF RK+HNC+NCG  
Sbjct: 409 TLVEVLRDRGVRHIACGANFTAAICQRKWMSGAEQSQCASCRQPFGFTRKRHNCHNCGHV 468

Query: 640 FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSL 699
            C+AC+++K++ A+L PN  KP RVCD+C+  L     S  + K++   PR+     G  
Sbjct: 469 HCNACTSRKVLRAALAPNPAKPYRVCDSCFLKLNNAIDSSAVNKRKEAVPRH----SGES 524

Query: 700 SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTH 759
           + + K  K A+ PS      S  S+    K G+  ++ S L     R  Q++  ++ +  
Sbjct: 525 NTDAKLAK-AIIPSNLDMIRSLDSKAA--KQGKKTDALSFL-----RNPQMNSLLQLRDI 576

Query: 760 CHEKSVEPT-PIPKT--QMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQRL 816
                 +   P+ KT    +  SP   + +  ++ + IA +   +L++ N+MLN+EV+RL
Sbjct: 577 ALSGGFDLNRPVQKTVRTPAVRSPSPPRSTTPTHGLSIAKSATDNLTKKNEMLNQEVERL 636

Query: 817 RDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI 876
           R Q  NL  +C++ + ++Q+  +K++EA +L  EE+ K KAAKE+IK+L  +L  ++E++
Sbjct: 637 RGQVDNLRHRCELQDLELQKSAKKVQEAMTLVAEESGKSKAAKEVIKSLTAQLKDMAERL 696

Query: 877 SAAKEAKEGVDA 888
                A +G DA
Sbjct: 697 PPDPGAYDGNDA 708



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 42/58 (72%)

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            + E+ EQYEPG+YIT  TL  G + LKRVRFSRRRF+E  AE WW EN   VY++Y +
Sbjct: 840  QAEWIEQYEPGVYITLMTLIDGTRDLKRVRFSRRRFSEHQAENWWNENHEKVYERYDV 897


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 296/679 (43%), Positives = 425/679 (62%), Gaps = 36/679 (5%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V       + D +V ++  + D LLPK LES ++LDV ++  G +HA+
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSD-TVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHAS 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ GEVF WGE   GRLGH    D   P+LVE L+  N+  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+PR++   L+G++++ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHG+L+++S P+EVESL GLK  +VACG WHTAAIV+++V +  +    GKLFT
Sbjct: 211 GSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV+TMG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGN  +  R   +VE K+  E V  I+ GSYHVAVLTS   V+TWGK ANG+LG GD ++
Sbjct: 331 LGNLNSDGRPC-LVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIED 389

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+ PT VEALRDR V  + CG++ TAAICLHK +S  DQS CS CR PFGF RK+HNCYN
Sbjct: 390 RKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCRQPFGFTRKRHNCYN 449

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHS--------------GRL 681
           CGL  C+AC+++K + A+L P+ GK  RVCD+CY+ L+  + S               R+
Sbjct: 450 CGLVHCNACTSRKALRAALAPSPGKLHRVCDSCYSKLKNASSSANKKDLAPGESNGEARV 509

Query: 682 LKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTS-KQSRNVERKPGECLESASSL 740
            K    S  +++    S + +  ++  AL+  R    +S  Q R++    G  L   ++ 
Sbjct: 510 GKSILSSNMDMIRSLDSKAAKQGKKTDALSFLRNPQVSSLLQLRDIAFSGGADLNRPAAP 569

Query: 741 SSGLQRWGQVSCPIRFKTHCHEKSVEP---TPIPKTQMSTHSPLLRKISLGSNFIPIAST 797
            +      +     R  +    +S  P   TP+P T                  + ++ +
Sbjct: 570 RAARTPAARSVTSSRAVSPFSRRSSPPRSTTPVPTTHG----------------LSLSKS 613

Query: 798 VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKA 857
              +L ++N++L++EV+RLR Q  +L  +C     ++ +  +K++EA +L  EE+ K KA
Sbjct: 614 ATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAMTLVAEESAKSKA 673

Query: 858 AKEIIKALAVRLHTLSEKI 876
           AKE+IK+L  +L  ++E++
Sbjct: 674 AKEVIKSLTAQLKDMAERL 692



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 23/29 (79%)

Query: 962 EYAEQYEPGIYITFTTLPSGQKGLKRVRF 990
           E+ EQYEPG+YIT TTL  G + LKRVRF
Sbjct: 836 EWIEQYEPGVYITLTTLRDGTRDLKRVRF 864


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 341/846 (40%), Positives = 472/846 (55%), Gaps = 85/846 (10%)

Query: 212  IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +E  D L DV IWGEG   G +GG        + T++DA  PK LES+V+LDVQNIS G 
Sbjct: 258  LEDFDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANTPKSLESSVVLDVQNISCGN 317

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
            +HA LVTK+GE F WGE   GRLGH    DVS PKL++   G+NV+ ++CGE+ +CA+T 
Sbjct: 318  RHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTS 377

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG++YTWG     + L+G R   SHW+P+K+   ++G+RVS V+CG WHTA+++++G+LF
Sbjct: 378  SGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLF 437

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM--VDRCKSNAI 449
            T+GDGTFG LGHG+      P+EVE+  GLK   VACG WHTAA+V++M  +D   S+A 
Sbjct: 438  TFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAP 497

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G LFTWGD DKG+LGH D + +L P C+T LVD  F + +C   +TV LT  G+VYTMG
Sbjct: 498  SGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMG 557

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            S V+GQLG P A   S   VE  L +  V+ IS GS+HVAVLTS   VYTWGK  NGQLG
Sbjct: 558  SNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLG 617

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             GD + + TPT V+ LRD+QV+ +VCGS+ +AAIC+H      D S C  CR+PF FRRK
Sbjct: 618  HGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWALSADNSICFGCRIPFNFRRK 677

Query: 630  KHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSP 689
            +HNCYNCG  FC ACS+KK + ASL P+  KP RVCD CY+ LQK   S    +      
Sbjct: 678  RHNCYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCYDKLQKAIESEPFSRVPKVKA 737

Query: 690  RNLLNLQGSLSEEVKEEKG-ALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQR-- 746
             N L      SE+  +E G  L        +S  S N  +     ++   + +S  Q   
Sbjct: 738  GNALY---KASEQTDKESGFPLLVGHTSRLSSSDSFNRAQGRISRVDQYENRASSFQNEN 794

Query: 747  -----WGQVSCPIR-FKTHCHEKSVEPTPIPKTQM--STHSPLLRKISLGSNFIP----- 793
                 +     PI  F+     KS+    +P T++   + SPLL K S   + IP     
Sbjct: 795  PPRESFSLSKSPISAFRV---SKSLFSASLPSTRVVPQSTSPLLGKASALWSAIPAPYPP 851

Query: 794  --IASTVEKDLSESNKMLNEEVQRLRDQ-----------ARNLEKQCQIGNQKVQECQ-- 838
               A  V  +L   N  L++EV++L+ Q           A  +   C I +++  + +  
Sbjct: 852  VRTAEVVVDNLKPINDSLSQEVKQLKAQLEAMLLGLFKNANGIRDGCGIKSEESAQLRLE 911

Query: 839  -----------------QKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKE 881
                             +++ +A + A  EAEK +AAK +IK+L  +L  ++E++   + 
Sbjct: 912  ELASKSQLLEAELGRKTKQLMDATAKAAVEAEKRRAAKHVIKSLTAQLKEVTERLPEEQI 971

Query: 882  AKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGSV 941
            +   +D N+          +    + R  +  C    V +  L    G       SS +V
Sbjct: 972  STSNLDFNV---------EQTSFNRTRPSNGKC----VTTTTLTECSG-------SSNTV 1011

Query: 942  EDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAE 1001
              +K +R +         K E   Q EPG+Y+   +LP G   LKRV FSR+ F+E  AE
Sbjct: 1012 VSAKKSRGQ---------KPERMLQVEPGVYLYLISLPDGGNELKRVHFSRKCFSEDEAE 1062

Query: 1002 RWWEEN 1007
            +WW EN
Sbjct: 1063 KWWNEN 1068



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  ++WY  ++EKQL L  V++II GQRT  FQ  P+P+++ QSFS+I    +RSLDLI
Sbjct: 68  DESAVVWYHDKEEKQLELCHVSRIIPGQRTAIFQQYPRPEKEYQSFSLIC--NDRSLDLI 125

Query: 62  CKDKVQAESWFLGLRAAISSCR 83
           CKDK +AE W  GL+A I+  R
Sbjct: 126 CKDKDEAEVWITGLKAIITRGR 147


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 360/991 (36%), Positives = 532/991 (53%), Gaps = 101/991 (10%)

Query: 34   FQCQPQPDRKQQSFSIIYANGERSLDLICKDKVQAESWFLGLRAAISSCRRSRTFSCLRE 93
            F+   +P++   SFS+IY NG+RSLDLICKDK + E WF GL++ I   R     S + E
Sbjct: 913  FRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEIWFAGLKSLIRQNRNKHAKSEIPE 972

Query: 94   KRGVQSCVSS--PASYIRRKHNLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSD 151
                  C S+  P++             + + +   +  G  S+ L       G+  S  
Sbjct: 973  IHD-SDCFSTGRPSTA------------SIDFAPNNTRRGRTSIDL-------GIQNSPT 1012

Query: 152  SFYSSESSSSQIQNLSNIITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPL 211
             F SS+    +     N++ PS     T+ F          R   + +    T T G   
Sbjct: 1013 KFGSSDVGYER----GNMLRPS-----TDGF----------RISVSSTPSCSTGTSGPDD 1053

Query: 212  IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            IE    L DV +WGE  +  D G + DG+V+    ++D                 I+ G 
Sbjct: 1054 IES---LGDVYVWGE--VCSD-GISQDGTVNCRTVKID-----------------IACGV 1090

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
            +H ALVT++GEVF WGE   GRLGH + +DVS PKLVE L+  N+  V+CGE+ TCA++ 
Sbjct: 1091 RHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTCAVST 1150

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG+++TWG   H   L+G     SHW+P+++   ++G++V  VACG WH+A+ + +G+LF
Sbjct: 1151 SGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLF 1210

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            T+GDG FGVLGHG+ ++VS PKEV+ L GLK   VACG WHT AIV++M ++  ++    
Sbjct: 1211 TFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVM-NQTGTSMSSK 1269

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            KLFTWGD DK RLGH + E  LLPTCV+ L+D++F Q +CG  LTV LT  G V+TMG  
Sbjct: 1270 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTMGGT 1329

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             HGQLG+  +  +   +V+ +L  EFV+ IS G +HVAVLTS   V+TWGK +NG+LG G
Sbjct: 1330 SHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHG 1389

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
            D ++R+TPT VEAL++R V                KSIS  DQS CS CR  FGF RK+H
Sbjct: 1390 DKEDRKTPTLVEALKERHV----------------KSISCADQSVCSGCRQAFGFTRKRH 1433

Query: 632  NCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRN 691
            NCYNCGL  C ACS+KK + A+L P  GKP RVCD CY  L+    +G      N + RN
Sbjct: 1434 NCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK----AGESGYNSNVANRN 1489

Query: 692  --LLNLQGSL--SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRW 747
                +L GS+    +++  K  L+P   ++   K S     +    +  AS + + LQ+ 
Sbjct: 1490 STTRSLDGSVRPDRDIRSSKILLSP---KTEPVKYSEVRSSRSESSIVRASQVPA-LQQL 1545

Query: 748  GQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNK 807
              V+ P        + +++P     T   +      + S        + ++   L +SN 
Sbjct: 1546 RDVAFPSSLS--AIQNALKPAASTSTSTLSSGIRSSRRSSPPRSSGFSRSMIDTLKKSNG 1603

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
            ++N+E+ RL+ Q +NL+++C     ++Q  ++   EA  LA + + K KAA E++K++A 
Sbjct: 1604 VINKEMTRLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAE 1663

Query: 868  RLHTLSEKIS---AAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKL 924
             L  L EK+    +  EA E +++     L+  +  E  LP    V      P   +N  
Sbjct: 1664 HLRELKEKLPPEVSGCEAFESMNSQAEAYLNASEASESSLPT-TSVGMGQQDPTPSANTQ 1722

Query: 925  KSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKG 984
                  E    ++ G++   + + T      +K    E  EQ+EPG+Y+T+    +G K 
Sbjct: 1723 DQ--NIEEKPSSNGGNMRSQEPSGTTEASSSSKGGGKELIEQFEPGVYVTYVLHKNGGKI 1780

Query: 985  LKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
             +RVRFS+RRF E  AE WW   +  + ++Y
Sbjct: 1781 FRRVRFSKRRFDEHQAEEWWNSKKDRLLKRY 1811


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 309/714 (43%), Positives = 437/714 (61%), Gaps = 49/714 (6%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW+S +KEK LRL+SVTKII GQRT  F     P++   SFS+I+ NG+RSLDL+
Sbjct: 36  DETSLIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLV 95

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNL-GLLEDA 120
           CKD+ + E WF  L   ISS R+    S + E +   S  S   +Y + +H+    L+ A
Sbjct: 96  CKDQAEVEVWFSALEGLISSFRKK---SLINEHKDRVS-FSEEVTYYQDRHSYDSTLDIA 151

Query: 121 TELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETE 180
           + +S+  +  G                Y   + +S   S      L+ I T ++      
Sbjct: 152 SNISRSFNSAG----------------YCGTNSFSFRKSDVGFDRLNMIRTSAAD----- 190

Query: 181 NFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGS 240
                      +R   + +    +   G+  IE    L DV +WGE  +  D+  + DG 
Sbjct: 191 ----------SSRVSISSALSSYSQGSGTDDIES---LGDVYVWGE--VWTDVTPS-DGH 234

Query: 241 VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
            S + ++VD L+PK LES V+LDV  I+ G +H AL T++GEVF WGE   GRLGH  + 
Sbjct: 235 TSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDA 294

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           D+S PKLVE LS   V  +SCGEF TCA+T SG+++ WG  ++   L+G     S+WLP+
Sbjct: 295 DISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPK 354

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
           K+   L+G++V  VACG WH+A+ ++SG+L+T+GDGTFGVLGHG+ + ++ PKEVE+L G
Sbjct: 355 KVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSG 414

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            K   VACG WH+AAIV++  ++  +N +  KL+TWGD DK RLGH D E +L+P CV  
Sbjct: 415 FKTIKVACGIWHSAAIVEV-TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQA 473

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           L++++F Q +CG  +TV L   G+V+TMGS+ +GQLGNPK+  +   +V+ +L  E V+ 
Sbjct: 474 LLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           IS G+ HV VLTS   VYTWG  ANG+LG GD ++R+ P  VEAL+DR V+S+ CGS+ T
Sbjct: 534 ISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFT 593

Query: 601 AAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
             IC+HK +S  DQS C+ CR  FGF RK+H+CYNCGL  C ACS++K++ A+L P  GK
Sbjct: 594 TCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGK 653

Query: 661 PSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR 714
           P RVCD+C+  L K   +G      N + RN +  + S+    K E+  + PSR
Sbjct: 654 PHRVCDSCFLKL-KAAETG----SNNSNRRNAVTRR-SIDGREKLERPEIRPSR 701



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 24/220 (10%)

Query: 819  QARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI-S 877
            +  +L+++C+  ++++Q   +K +   S+A EE  +C A  E +K L   L+ +  ++ S
Sbjct: 713  EVDSLKQKCEAQHEQLQISDKKTKTVVSMATEEYTRCSAVVEFVKFLDNELNGIVHELPS 772

Query: 878  AAKEAKEGVDANLPPKLDTDK-HP-EVKLPKDRKVDSLCSSPIV---FSNKLKSVYGREL 932
             A E+ + +   +   L   + HP E+  P D     L S       FSN  +S   R L
Sbjct: 773  DAAESLKALQNQVQALLREQRSHPSELLNPMDHDGIQLSSGGNALHDFSNH-RSGSTRYL 831

Query: 933  CHDNSSGSVEDSKVARTE--PQQKGTKA---------------SKLEYAEQYEPGIYITF 975
                 + S   S ++ T   P  +G +                 +++  EQ+EPG+Y+T 
Sbjct: 832  FMSQDASSASGSAISLTSEPPSHRGMEHHAKVPNDFVPKHDTHGEVQLIEQFEPGVYVTL 891

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
              L  G K  KRVRFS+++F E  AE WW ENQ  V++KY
Sbjct: 892  IQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKY 931


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/674 (44%), Positives = 416/674 (61%), Gaps = 18/674 (2%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V    +    D  +S    + D LLPK LES ++LDV ++  G KHAA
Sbjct: 32  DSLGDVYVWGEVVCDTSVRTGSDTVISSTG-RTDILLPKPLESNLVLDVYHVDCGVKHAA 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LV K GEVF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+
Sbjct: 91  LVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           Y+WG   H   L+G      HW+P+++   L+G++V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA--IGGKL 453
           G+FGVLGHG+L++VS P+EVESL GLK  +VACG WHTAAIV+++V R  S+     GKL
Sbjct: 211 GSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKL 270

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           FTWGD DK RLGH D E +L PTCV  L+D DF + +CG  LTV LT  G+V +MG+AV+
Sbjct: 271 FTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVY 330

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLGNP +  R   +VE K+  E V  I+ GSYHVAVLT    V+TWGK ANG+LG GD 
Sbjct: 331 GQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGHGDI 390

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
           ++R+ PT VE L+DR V  + CG++ TAAIC +K +S  DQS CS CR PFGF RK+ NC
Sbjct: 391 EDRKVPTLVEVLKDRAVRYIACGANFTAAICQYKWVSGADQSQCSSCRQPFGFTRKRRNC 450

Query: 634 YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLL 693
           YNCGL  C+AC+++K + A+L P+ GKP RVCD+C+  L   +      ++++  P   +
Sbjct: 451 YNCGLVHCNACTSRKALRAALAPSPGKPYRVCDSCFLKLNNASDPNAANRRKDPVPYQPV 510

Query: 694 NLQGSLSEEVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVS 751
              G    + K  K +L  +    ++   K +R  ++  G        +SS LQ      
Sbjct: 511 ESNG----DAKVGKASLPSNMDMIRNLDIKAARQGKKTDGLSFLRNPQVSSLLQLSDIAL 566

Query: 752 CPIRFKTHCHEKSVEPTPIPKTQMSTH-SPLLRKISLGSNFIPIASTVEKDLSES----- 805
                      ++V  +       S   SP  RK S   +  P+ +     LS+S     
Sbjct: 567 SGGLGMNRSAPRAVRISAARSVTTSRAVSPFSRKPSPPRSTTPVPTAHGLSLSKSATDNI 626

Query: 806 ---NKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEII 862
              +++LN+EV+RLR Q  NL  +C++   ++Q+  +K++EA +L  EE+ K KAAKE+I
Sbjct: 627 VKAHELLNQEVERLRAQVDNLRNRCELQELELQKSAKKVQEAMTLVAEESAKSKAAKEVI 686

Query: 863 KALAVRLHTLSEKI 876
           K+L  +L  ++E++
Sbjct: 687 KSLTAQLKDMAERL 700



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/57 (61%), Positives = 43/57 (75%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIE 1018
            E+ EQYEPG+YIT TTL  G + LKRVRFSRRRF E  AE WW EN+  VY++Y ++
Sbjct: 845  EWIEQYEPGVYITLTTLRDGTRDLKRVRFSRRRFGEHQAENWWNENREKVYERYNVK 901


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/678 (43%), Positives = 421/678 (62%), Gaps = 39/678 (5%)

Query: 213 ERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
           E  +   DV +WGE +         DG+V       D L+PK LES VMLDV  ++ G K
Sbjct: 213 EDSESFGDVYVWGEVMCDTTSRSGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVK 272

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           HAAL+T++ EVF WGE   GRLGH     +  P+L+E LS  NV+ ++CGEF TCA+T +
Sbjct: 273 HAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTAT 332

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           G++YTWG   H A L+G   + SHW+P+++   L+G++VS V+CG WHTA++++SGQL+T
Sbjct: 333 GDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYT 392

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +GDGTFG LGHGN + +S PKEVESL+GL+  SV+CG WH+AA+V++++   +SNA  GK
Sbjct: 393 FGDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIM--TQSNASSGK 450

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           LFTWGD DK RLGH D   KL PTCV  L+D++F +++CG  LT+GLT  G ++T+GS+V
Sbjct: 451 LFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSV 510

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +GQLGNP    R   +VE K+    V  ++ GSYHVAVLT+ G VYTWGK ANG+LG GD
Sbjct: 511 YGQLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGD 570

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHN 632
             +R+ PT VEALRDR V+ + CGSS TAAI  HK +S  +QS CS CR PFGF RK+HN
Sbjct: 571 IADRKVPTLVEALRDRSVKRIACGSSFTAAISQHKWVSGVEQSQCSACRQPFGFTRKRHN 630

Query: 633 CYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNL 692
           CYNCGL  C +CS+KK + A+L+PN GKP RVCD+CY  L K+  SG +    N  PR  
Sbjct: 631 CYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYMKLSKVLDSG-VSYSRNTIPR-- 687

Query: 693 LNLQGSLSEEVKEEKGALTPSRGQSFTSKQS-RNVERKPGECLESASSLSSGLQRWGQVS 751
                 +  + K E+     +R  S TS    +N++ K  +  + +              
Sbjct: 688 ------IPGDTKAERMDTKATRVASATSSDMIKNLDVKAAKQTKKSDHAP---------- 731

Query: 752 CPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIP-------------IASTV 798
              +F      K + P   P    +T S +    S  + + P             ++S  
Sbjct: 732 ---QFPAILQLKDI-PFVGPGDLNNTGSTVSNGYSNDTRYAPQILRMPHLNSSSSLSSES 787

Query: 799 EKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAA 858
            +   E+N++L +EVQ+LR +  +L ++ +  + ++Q+ + K  EA +LA EE  K KAA
Sbjct: 788 IESFREANELLKQEVQKLRAEVSSLRQEREQQDNELQKSEAKAHEAVTLAAEEVSKSKAA 847

Query: 859 KEIIKALAVRLHTLSEKI 876
           KE+IK+L  ++  ++E++
Sbjct: 848 KEVIKSLTAQVKEMAERL 865



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 39/56 (69%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+Y+T  +L  G K LKRVRFSRRRF E  AE WW EN   VY KY +
Sbjct: 1001 EWIEQYEPGVYLTLVSLHDGTKELKRVRFSRRRFGEHQAESWWSENHEKVYDKYNV 1056


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 335/770 (43%), Positives = 457/770 (59%), Gaps = 85/770 (11%)

Query: 123  LSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITP--SSP--HME 178
              +V    GSP ++  ++ FSD L  S   F+  + + S I +    +TP  ++P  H  
Sbjct: 362  FDEVYPSYGSPKMT-QKKFFSDNLDCSEALFHPRQRTLSDIDSYLEKLTPKVATPVKHGL 420

Query: 179  TENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVD 238
             +  +  ++    T+ PK ++        G     R D LKD+ +WG      D+ G++ 
Sbjct: 421  KDIMVANKMKEQKTQTPKLKTFE------GPHAACRLDSLKDIFLWG------DVLGSML 468

Query: 239  GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
            GS    K      LP+L+ S  MLDVQ+I+ G  HAA++TK+GEVF WG+   GRLGHKV
Sbjct: 469  GSEDLPKA-----LPRLVGSTKMLDVQSIACGENHAAIITKQGEVFSWGKESSGRLGHKV 523

Query: 299  NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            N+ +SCPK+V+ L+ ++V+ V+ G   TCA+T SGE++ WG   +   L+ +   R+ W+
Sbjct: 524  NVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGELFEWGEGANSLGLLNDWYGRNQWV 583

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            P KLF  +D + VSK+ACGEWH AI+++SGQLFTYGDGTFGVLGHG+ Q +++PKEVESL
Sbjct: 584  PHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYGDGTFGVLGHGDTQGIARPKEVESL 643

Query: 419  RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +GL++ SVACGPWHTAAIV++M    K+NA  GKLFTWG+AD+G+L H D + KL+PTCV
Sbjct: 644  KGLRMSSVACGPWHTAAIVEVM-SSFKANAPSGKLFTWGNADRGKLDHADKKMKLVPTCV 702

Query: 479  TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
              L+ +DF+Q SCG  LTV LT  G V+T+GS+ HGQLGNP+     I  VEG LK EFV
Sbjct: 703  DSLIVYDFIQVSCGMALTVVLTVTGVVFTVGSSRHGQLGNPQVDGEYICTVEGLLKTEFV 762

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            + ISSGS HVAVLT  G V+TWGK A GQLGLGD   R +PT VEAL  R VES+ CGSS
Sbjct: 763  REISSGSSHVAVLTMNGKVFTWGKGAEGQLGLGDYVNRSSPTLVEALEGRHVESIACGSS 822

Query: 599  ITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNK 658
             TAAICLHK+IS+ DQS CS C+M FGF RKKHNCYNCG  FC++CS+ KI  AS  P +
Sbjct: 823  FTAAICLHKAISIKDQSVCSGCQMAFGFTRKKHNCYNCGSMFCNSCSSNKIAKASFAP-E 881

Query: 659  GKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSF 718
             +  RVCD C+  LQK   S ++  +          L+ S  E  K E  + TP   + F
Sbjct: 882  NRRYRVCDVCFCQLQKAVDSSKVKSE----------LKTSKGEMFKTEMKSYTPKLSRIF 931

Query: 719  TSKQSRNVERK------PGECLE-SASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIP 771
              K++  +  K      P +  E SA+ +    QRWGQV CP +F +   + S +  P+ 
Sbjct: 932  --KEANFIVEKMALLQGPNQRNEDSATPVQVKTQRWGQVECPAQFIS--AQDSFQNKPMS 987

Query: 772  KTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLNEEVQR----LRDQARNLEKQC 827
            K QM                          +S S +M +  V R    L+  A  L K+ 
Sbjct: 988  KNQMC------------------------GISFSQRMHDSVVLRSGSSLQQSADEL-KEY 1022

Query: 828  QIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKIS 877
             I           + +  ++ R+EA KCK AK++IK L  +  +L   +S
Sbjct: 1023 DI-----------LVDVQAVVRDEAAKCKPAKDVIKVLTDQRSSLDILVS 1061


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/675 (43%), Positives = 435/675 (64%), Gaps = 22/675 (3%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L D+ +WGE +    +    D   S   ++ D LLPK LES ++LD Q+I+ G +H+A
Sbjct: 231 DALGDIFVWGEVISDNFMKPGAD-RASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSA 289

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +VT++GEVF WGE   GRLG  +  DV+ P+LVE L+   V  V+CGEF TCA+T  GE+
Sbjct: 290 IVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGEL 349

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H A L+G     SHW+P+++   L+G++V+ VACG WHTA++S++GQLFT+GD
Sbjct: 350 YTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGD 409

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           GTFGVLGHG+ +++S P+EV+SL GL+  +VACG WHTAA+V++++ +  ++   GKLFT
Sbjct: 410 GTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFT 469

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D++F + +CG  +T+GLT  G+V+T+GS+V+GQ
Sbjct: 470 WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQ 529

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP A  +   +VE KL  E  + ++ G+YHV VLTS   VYTWGK ANG+LG GD ++
Sbjct: 530 LGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVED 589

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R++PT VE+L+D+ V+ + CGS+ +AAICLHKS+S  +QS CS CR  FGF RK+HNCYN
Sbjct: 590 RKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGFTRKRHNCYN 649

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C +CS+KK + A+L P   K  RVCD+CY  L K++ SG   ++ N  PR     
Sbjct: 650 CGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSESGSNYRK-NAVPRLSGEN 708

Query: 696 QGSLSE-EVKEEKGALTP-SRGQSFTSKQSRNVERKPGECLESASSLSSGLQ-RWGQVSC 752
           +  L + + +  K AL+     +   SK ++  +R     +   +   S LQ + G +  
Sbjct: 709 RDKLDKSDTRPPKTALSNMDLIKQLDSKAAKQGKRTDTFAVVRPTQAHSLLQLKDGPIPN 768

Query: 753 PIRFKTHCHEKSVEPTPIPK---TQMSTHSPLLRKISLGSNFIPIAST--------VEKD 801
            +        + + P PIP        + SPL R+ S   +  P+ +         +   
Sbjct: 769 TVDI------RRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASGLSFSKGIADS 822

Query: 802 LSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEI 861
           L ++N++LN+EV  LR Q  +L K+C++   ++++ ++K EEA ++A EE+ K KAAKE+
Sbjct: 823 LKKTNELLNQEVLMLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESAKSKAAKEV 882

Query: 862 IKALAVRLHTLSEKI 876
           I +L  ++  ++E++
Sbjct: 883 ITSLTAQIKHMAERL 897



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 57/80 (71%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S   EK L+L SV++II GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 46  DELSLIWISTTGEKSLKLASVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISS 81
           CKDKV+AE W  GL+A I S
Sbjct: 106 CKDKVEAEIWIAGLKALIGS 125



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 42/56 (75%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+YIT T L +G + LKRVRFSRRRF E  AE WW EN+  VY+KY +
Sbjct: 1050 EWIEQYEPGVYITLTALRNGTRDLKRVRFSRRRFGEHQAESWWSENRDKVYEKYNV 1105


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago truncatula]
          Length = 1108

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 324/866 (37%), Positives = 492/866 (56%), Gaps = 107/866 (12%)

Query: 218  LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            L DV IWGE V    +  A DG+ +Q  +  D L+PK LES+V+LDV  I+ G +H ALV
Sbjct: 223  LGDVYIWGE-VWADAV--APDGNGTQFPSTTDVLVPKPLESSVVLDVHQIASGVRHMALV 279

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T++GEVF WGE   GRLGH ++ D   P+LVE L+  NV+SV+CGE  TCA++ S E+++
Sbjct: 280  TRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAVSISDELFS 339

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG   +   L+G     SHW+P+++   L+G++V  +ACG WH+A+ +++G+LFT+GDGT
Sbjct: 340  WGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGTWHSALATSNGKLFTFGDGT 399

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            FGVLGHGN ++V+ PKEV+ L GLK  +VACG WHTAAIV++   +  SN    KLFTWG
Sbjct: 400  FGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVEVTF-QSGSNVSSRKLFTWG 458

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D DK RLGH + E  L PTCV+ L++++F Q +CG  +T+ LT  G ++TMG    GQLG
Sbjct: 459  DGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLG 518

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            N  +  +   +V+  L  EFV+ IS G++HVA LTS   +YTWGK ANG+LG GD  +R+
Sbjct: 519  NSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRK 578

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
            +PT VEAL++R V+++ CGSS T+ IC+HK +S  DQS+C+ CR PFGF RK+HNCYNCG
Sbjct: 579  SPTLVEALKERHVKNISCGSSFTSCICIHKWVSGVDQSTCTGCRQPFGFTRKRHNCYNCG 638

Query: 638  LHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI-------------------THS 678
            L  C  CS++K++ A+L P  GKP RVCD+CY  L+ +                   +  
Sbjct: 639  LVHCHGCSSRKVMKAALAPTPGKPHRVCDSCYTKLKAVEANAASNLNRKVTITQPRSSID 698

Query: 679  GRLLKQENQSPRNLLNLQGSLSEEVK--EEKGALTPSRGQSFTSKQSRNVERKPGECLES 736
            GR    + ++ R+   L    SE +K  E +     +     TS+     + K      S
Sbjct: 699  GRDRYGQGETVRSTKILFPPFSEPLKYLEMRTNKLGNSSMLPTSQIPSIAQMKDMSFPSS 758

Query: 737  ASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIP-IA 795
             SS+ +GL+               +  +  P   P     + SP  R+ S   +  P  +
Sbjct: 759  TSSIQNGLK---------------YPLAPNPPSTPPLNARSVSPYARRPSPPRSSSPGFS 803

Query: 796  STVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKC 855
             ++   + ++N++LN++V +L++Q R+L+++  +   ++Q+  + I++A SLA EE+ K 
Sbjct: 804  RSIIDSMKKTNELLNQQVSKLQNQNRSLKQKSTM---EIQKLHKNIKDATSLAAEESSKH 860

Query: 856  KAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLPPK-LDTDK------HPEVKLPKDR 908
            KA KE   ++  +L  ++E+              LPP+ L+ +K      H E  L ++ 
Sbjct: 861  KATKEYFGSMIAQLKEMAEQ--------------LPPEVLEGEKFRNMVIHAENFLEENP 906

Query: 909  KVDSLC----------SSPIVFSNKLKSVYGRELCHDN---------------------S 937
            K ++            S P+  + KLK   G+ +  +N                     S
Sbjct: 907  KYETCSVASNLESEQQSEPVSNNGKLK---GKIIEENNNEAAEVNPSQDVGNVFQENNGS 963

Query: 938  SGSVEDSKVA--------RTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVR 989
            S S  +++VA        RT    +  +    +  +Q+EPG+Y+T    P G++  K V+
Sbjct: 964  SSSNTEARVASQSSENDSRTLNPSRSVREGNTQVVDQFEPGVYVTLIVRPDGKRLFKSVK 1023

Query: 990  FSRRRFTEKAAERWWEENQVVVYQKY 1015
            FS+R+F E  AE WW  N+  V+ +Y
Sbjct: 1024 FSKRKFREHQAEEWWTLNKDRVHARY 1049


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 304/788 (38%), Positives = 461/788 (58%), Gaps = 55/788 (6%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
            + I+ G++H  L T++GEVF WGE   GRLGH  + D+  PKLVE L+  NV+ ++CGEF
Sbjct: 228  EQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEF 287

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
             TC +T SG++Y WG  ++ A L+G     SHWLP+++   L+G++V  VACG WH+A+ 
Sbjct: 288  HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 347

Query: 385  STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
             +SG+LFT+GDGTFG LGHG+ ++V+ PKEVE+L G +   VACG WH+AAIV+I   + 
Sbjct: 348  MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEIS-GQA 406

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
             +NA+  KLFTWGD DK RLGH D E KL+PTCV  LVD +F Q +CG  +TV L   G 
Sbjct: 407  STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGH 466

Query: 505  VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
            V+TMGS+ +GQLGNPKA  +   +V+ KL  E V+ IS GS HVA LTS   VYTWG  A
Sbjct: 467  VFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGA 526

Query: 565  NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPF 624
            NG+LG G  ++++ PT V+AL+DR V+S+ CGS+ T  IC+HK +S  DQS CS CR PF
Sbjct: 527  NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPF 586

Query: 625  GFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQ 684
            GF RK+HNCYNCGL  C ACS++K++ A+L P  GKP RVCD+C+  L K   +G +   
Sbjct: 587  GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKL-KAADTGVI--- 642

Query: 685  ENQSPRNLLNLQGSLSEEVKEEKGALTPSR------GQSFTSKQSRNV--ERKPGECLES 736
             + + RN++  + S+  + K E+  + PSR       +    ++++NV  E KP + +  
Sbjct: 643  SSYNKRNVITRR-SIDIKDKLERPEIRPSRLATTSPAEPVKYQETKNVRNETKPADPMS- 700

Query: 737  ASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISL--------- 787
                   + +  QV   ++FK      +    P     M+    +   + +         
Sbjct: 701  -------MMKASQVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMGMPMFSPSPPSKK 753

Query: 788  ----GSNFIPIASTVEKD-LSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIE 842
                 +   P+   V+ D L ++N++LN+++ +L+ Q   L+++C+  ++++Q+ ++K +
Sbjct: 754  PSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAK 813

Query: 843  EAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI------------SAAKEAKEGVDANL 890
            +A S+A EE+ +     + +K L   L  +++++            S ++    G  +NL
Sbjct: 814  QAASMASEESARRNTVLDFVKHLDSELKVIADRVPGDVADNLKTLQSQSERFLAGQSSNL 873

Query: 891  PPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHDNSSGS---VEDSKVA 947
                    H ++   +     SL   P+       +  G  +   + S     +E++  A
Sbjct: 874  VEITGLTGH-DIGHHRSSSTGSL---PVSQDGSSGNASGSSIAMASDSPCHRIMENNLKA 929

Query: 948  RTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEEN 1007
              +   K     +++  EQ+EPG+Y+T   L  G K  KRVRFS+RRF E+ AE WW EN
Sbjct: 930  PGDFAPKYGTHGEVQLIEQFEPGVYVTLIQLRDGTKVFKRVRFSKRRFAEQQAEEWWREN 989

Query: 1008 QVVVYQKY 1015
            Q  V++KY
Sbjct: 990  QERVFKKY 997



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 35/290 (12%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVM-LDVQNISLGAKHAALVT 278
           D+  WG+G     + G        + T V   LPK +   +  L V +++ G+ H+AL  
Sbjct: 297 DLYDWGDGSYNAGLLG--------HGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTM 348

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK------- 331
             G++F +G+G  G LGH     V+ PK VE LSG     V+CG + + A+ +       
Sbjct: 349 SSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQAST 408

Query: 332 ---SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
              S +++TWG  +   + +G     +  +P  +   +D     +VACG   T  ++TSG
Sbjct: 409 NAMSRKLFTWGDGD--KNRLGHGDKEAKLVPTCVQALVDH-NFHQVACGHSMTVALATSG 465

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSN 447
            +FT G    G LG+       QP  V+   G + V+ ++CG  H AA+           
Sbjct: 466 HVFTMGSSNNGQLGNPKADG-KQPCMVQDKLGNELVEEISCGSNHVAALTS--------- 515

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
               +++TWG    GRLGH   E K  PT V  L D      SCG   T 
Sbjct: 516 --RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTT 563



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG- 322
           V+ IS G+ H A +T   EV+ WG G +GRLGH    D   P LV+ L   +V+S+SCG 
Sbjct: 500 VEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGS 559

Query: 323 EFQTC 327
            F TC
Sbjct: 560 NFTTC 564


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 302/701 (43%), Positives = 425/701 (60%), Gaps = 49/701 (6%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW+S +KEK LRL+SVTKII GQRT  F     P++   SFS+I+ NG+RSLDL+
Sbjct: 36  DETSLIWFSHKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLV 95

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
           CKD+ + E WF  L   ISS R+    S + E +   S  S   +Y + +H+     D+T
Sbjct: 96  CKDQAEVEVWFSALEGLISSFRKK---SLINEHKDRVS-FSEEVTYYQDRHSY----DST 147

Query: 122 ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
                  +  + SLS       +   Y   + +S   S      L+ I T ++       
Sbjct: 148 -----LDIASNISLSF------NSAGYCGTNSFSFRKSDVGFDRLNMIRTSAAD------ 190

Query: 182 FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                     +R   + +    +   G+  IE    L DV +WGE  +  D+  + DG  
Sbjct: 191 ---------SSRVSISSALSSYSQGSGTDDIES---LGDVYVWGE--VWTDVTPS-DGHT 235

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
           S + ++VD L+PK LES V+LDV  I+ G +H AL T++GEVF WGE   GRLGH  + D
Sbjct: 236 SSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDAD 295

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           +S PKLVE LS   V  +SCGEF TCA+T SG+++ WG  ++   L+G     S+WLP+K
Sbjct: 296 ISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKK 355

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           +   L+G++V  VACG WH+A+ ++SG+L+T+GDGTFGVLGHG+ + ++ PKEVE+L G 
Sbjct: 356 VSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF 415

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
           K   VACG WH+AAIV++  ++  +N +  KL+TWGD DK RLGH D E +L+P CV  L
Sbjct: 416 KTIKVACGIWHSAAIVEV-TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQAL 474

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
           +++DF Q +CG  +TV L   G+V+TMGS+ +GQLGNPK+  +   +V+ +L  E V+ I
Sbjct: 475 LEYDFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEI 534

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           S G+ HV VLTS   VYTWG  ANG+LG GD ++R+ P  VEAL+DR V+S+ CGS+ T 
Sbjct: 535 SCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTT 594

Query: 602 AICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKP 661
            IC+HK +S  DQS C+ CR  FGF RK+H+CYNCGL  C ACS++K++ A+L P  GKP
Sbjct: 595 CICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKP 654

Query: 662 SRVCDTCYNHLQKITHSGR--------LLKQENQSPRNLLN 694
            R+    +        S +        LL+++   P  LLN
Sbjct: 655 HRLNGIVHELPSDAAESLKALQNQVQALLREQRSHPSELLN 695



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 960  KLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKY 1015
            +++  EQ+EPG+Y+T   L  G K  KRVRFS+++F E  AE WW ENQ  V++KY
Sbjct: 770  EVQLIEQFEPGVYVTLIQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKY 825


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/670 (44%), Positives = 414/670 (61%), Gaps = 34/670 (5%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE V    +    D  +S    ++D LLPK LES ++LDV ++  G KHAA
Sbjct: 32  DSLGDVYVWGEVVCDTSVRTGSDTVISSTG-RIDILLPKPLESNLVLDVYHVDCGVKHAA 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LV K GEVF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+
Sbjct: 91  LVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   +   L+G      HW+P+++   L+G++V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA--IGGKL 453
           G+FGVLGHG+L++VS P+EVESL GLK  +VACG WHTAAIV+++V R  S+     GKL
Sbjct: 211 GSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKL 270

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           FTWGD DK RLGH D E +L PTCV  L+D DF + +CG  LTV LT  G+V +MG+AV+
Sbjct: 271 FTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVY 330

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLGNP +  R   +VE K+  E V  I+ GSYHVAVLT+   V+TWGK ANG+LG GD+
Sbjct: 331 GQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDT 390

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
           ++R+ PT VEAL+DR V  + CG++ TAAIC +K +S  DQS CS CR PFGF RK+ NC
Sbjct: 391 EDRKVPTLVEALKDRAVRYIACGANFTAAICQYKWVSGADQSQCSSCRQPFGFTRKRRNC 450

Query: 634 YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLL 693
           YNCGL  C++C+++K + ASL P+ GKP RVCD+C+  L   +      ++++  P   +
Sbjct: 451 YNCGLVHCNSCTSRKALRASLAPSPGKPYRVCDSCFLKLNNASDPNAANRRKDPVPYQPV 510

Query: 694 NLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
              G    + K  K +L PS  +       RN++ K     +    LS    R  QVS  
Sbjct: 511 ESNG----DAKVGKASL-PSNMEMI-----RNLDIKAAWQGKKTDGLS--FLRNPQVSSL 558

Query: 754 IRFK----------THCHEKSVEPTPIPKTQMS-THSPLLRKISLGSNFIPIAS------ 796
           ++                 ++V  +       S   SP  RK S   +  P+ +      
Sbjct: 559 LQLSDIALSGGLGMNRSAPRAVHISAARSVTTSRAVSPFSRKPSPPRSTTPVPTAHGLSF 618

Query: 797 --TVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEK 854
             +   ++ ++N++LN+EV+RLR Q  NL  +C++   ++Q+  +K+ EA +L  EE+ K
Sbjct: 619 SKSATDNIVKANELLNQEVERLRAQVDNLRNRCELQELELQKSAKKVLEAMTLVAEESAK 678

Query: 855 CKAAKEIIKA 864
            KAAKE+ +A
Sbjct: 679 SKAAKEVNQA 688


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 342/964 (35%), Positives = 512/964 (53%), Gaps = 92/964 (9%)

Query: 34   FQCQPQPDRKQQSFSIIYANGERSLDLICKDKVQAESWFLGLRAAISSCRRSRTFSCLRE 93
            F+   +P++   SFS+IY NG+RSLDLICKDK + E WF GL+            S +R+
Sbjct: 1034 FRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLK------------SLIRQ 1081

Query: 94   KRGVQSCVSSPASYIRRKHNLGLLEDAT-ELSQVRSLCGSPSLSLSERCFSDGLSYSSDS 152
             R  Q+    P  +     + G    A+ + +   +  G  S+ L       G+  S   
Sbjct: 1082 NRNKQAKSEIPEIHDSDCFSTGRPSTASIDFAPNNTRRGRTSIDL-------GIQNSPTK 1134

Query: 153  FYSSESSSSQIQNLSNIITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLI 212
            F SS+    +     N++ PS     T+ F          R   + +    T T G   I
Sbjct: 1135 FGSSDVGYER----GNMLRPS-----TDGF----------RISVSSTPSCSTGTSGPDDI 1175

Query: 213  ERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            E    L DV +WGE  +  D G + DG V+    ++D                 I+ G +
Sbjct: 1176 ES---LGDVYVWGE--VWSD-GISPDGVVNSTTVKID-----------------IACGVR 1212

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H ALVT++GEVF W E   GRLGH + +DV  PKLVE L+  N+  V+CGE+ TCA++ S
Sbjct: 1213 HIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTS 1272

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            G+++TWG   H   L+G     SHW+P+++   ++G++V  VACG WH+A+ + +G+LFT
Sbjct: 1273 GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFT 1332

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            +GDG FGVLGHG+ ++VS PKEV+ L GLK   VACG WHT AIV++M ++  ++    K
Sbjct: 1333 FGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVM-NQTGTSTSSRK 1391

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            LFTWGD DK RLGH + E  LLPTCV+ L+D++F Q +CG   TV LT  G V+TMG   
Sbjct: 1392 LFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTS 1451

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            HGQLG+  +  +   +V+ +L  EFV+ IS G +HVAVLTS   V+TWGK +NG+LG GD
Sbjct: 1452 HGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGD 1511

Query: 573  SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHN 632
              +R+TPT VEALR+R V+S+ CG+               DQS CS CR  FGF RK+HN
Sbjct: 1512 KDDRKTPTLVEALRERHVKSISCGA---------------DQSVCSGCRQAFGFTRKRHN 1556

Query: 633  CYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQ--KITHSGRLLKQENQSPR 690
            CYNCGL  C ACS+KK + A+L P  GKP RVCD CY  L+  +  ++  +  + + +P 
Sbjct: 1557 CYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLKAGESGYNSNVANRNSTTPT 1616

Query: 691  NLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQV 750
              L+  G    +++  +  L+P   ++   K S     +    +  AS + + LQ+   V
Sbjct: 1617 RSLDGTGRPDRDIRSSRILLSP---KTEPVKYSEVRSSRSESSIVRASQVPA-LQQLRDV 1672

Query: 751  SCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEKDLSESNKMLN 810
            + P        + + +P     T          +IS        +  +   L +SN ++N
Sbjct: 1673 AFPSSLSA--IQNAFKPVASSSTSTLPSGTRSSRISSPPRSSGFSRGMIDTLKKSNGVIN 1730

Query: 811  EEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLH 870
            +E+ +L+ Q +NL+++C     ++Q  ++   EA  LA + + K KAA E++K++A  L 
Sbjct: 1731 KEMTKLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAEHLR 1790

Query: 871  TLSEKISAAK---EAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSV 927
             L EK+       EA E +++     L+  +  E  LP    +      P   +N     
Sbjct: 1791 ELKEKLPPEVSRCEAFESMNSQAEAYLNASEASESCLPT-TSLGMGQRDPTPSTNTQDQ- 1848

Query: 928  YGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKR 987
               E    ++ G++   + + T      +K    E  EQ+EPG+Y+T+    +G K  +R
Sbjct: 1849 -NIEEKQSSNGGNMRSQEPSGTTEASSSSKGGGKELIEQFEPGVYVTYVLHKNGGKIFRR 1907

Query: 988  VRFS 991
            VRFS
Sbjct: 1908 VRFS 1911


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/637 (44%), Positives = 390/637 (61%), Gaps = 16/637 (2%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV +WGE      +    D ++ ++  + D LLPK LES ++LDV ++  G +HAA
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSD-TIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAA 90

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           LVT+ G+VF WGE   GRLGH    D   P+LVE L+  NV  V+CGEF TCA+T +GE+
Sbjct: 91  LVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGEL 150

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G      HW+P+++   LDG+ V+ V+CG WHTA++++ GQLFT+GD
Sbjct: 151 YTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGD 210

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+FGVLGHGNL ++S PKEVESL GLK  +VACG WHTAAIV+++V    S+   GKLFT
Sbjct: 211 GSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFT 270

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD DK RLGH D E +L PTCV  L+D+DF + +CG  LTV LT  GKV +MG++V+GQ
Sbjct: 271 WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP +  R   +VE ++  E V  ++ GSYHVAVLT    V+TWGK ANG+LG GD ++
Sbjct: 331 LGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIED 390

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R+ PT VEAL+DR V  + CG++ TAAICLHK +S  DQS CS C+ PFGF RK+HNCYN
Sbjct: 391 RKVPTQVEALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYN 450

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL 695
           CGL  C+AC+++K + A+L PN GKP RVCD+C+  L+    S    K+++     + +L
Sbjct: 451 CGLVHCNACTSRKALRAALAPNPGKPYRVCDSCFLKLKNALDSDSFNKRKDI----VSHL 506

Query: 696 QGSLSEEVKEEKGALTPSRG--QSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCP 753
            G  + + K  K  L+ +    +S  SK +R  ++           +SS LQ        
Sbjct: 507 AGESNGDTKASKTILSSNMDIIRSLDSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSG 566

Query: 754 IRFKTHCHEKSVEPTPIPKTQMS-THSPLLRKISLGSNFIPIAST--------VEKDLSE 804
                    ++V  + +     S   SP  RK S   +  P+ +T           +L++
Sbjct: 567 SADMNRSVPRAVRTSAVRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAK 626

Query: 805 SNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKI 841
           +N++LN+E+ RL  Q        +I    +  C + I
Sbjct: 627 TNELLNQEIDRLHAQVCTSLYSAEINLDALLCCNKPI 663


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 314/813 (38%), Positives = 461/813 (56%), Gaps = 88/813 (10%)

Query: 281  GEVFCWGE-------GKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            G+V+ WGE       G D    +     DV  P+ +E    ++V  ++CG      +T+ 
Sbjct: 237  GDVYIWGEVLCSVKVGADKNTSYLSTRADVLLPRPLESNVVLDVHHIACGVRHAAMVTRQ 296

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLP-RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            GE++TWG  + G   +G    +    P  ++   L+G++V+ V CG WHTA+V++ GQLF
Sbjct: 297  GEVFTWGEESGGR--LGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLF 354

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            T+GDGTFGVLGHGN +NV+ P+EVESL GL+  +VACG WHTAA+V+++V +  S+A  G
Sbjct: 355  TFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSASSG 414

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            KLFTWGD DK RLGH D E +L PTCV  L+D++F + +CG  LTVGLT  G V+TMGS 
Sbjct: 415  KLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMGST 474

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            V+GQLGNP A  +   +VE KL  E V+ I+ G+YHVA LTS   VYTWGK ANG+LG G
Sbjct: 475  VYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYTWGKGANGRLGHG 534

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
            D ++R+TPT VEAL+DR V+ + CG++ +AAIC HK +S  +QS CS CR  FGF RK+H
Sbjct: 535  DGEDRKTPTIVEALKDRHVKYIACGANYSAAICFHKWVSGSEQSQCSSCRQAFGFTRKRH 594

Query: 632  NCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT--------HSGRLLK 683
            NCYNCGL  C +CS++K   A+L PN  KP RVCD+C+  L K++        ++G  L 
Sbjct: 595  NCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFVKLNKMSEPSNTNRRNAGPRLS 654

Query: 684  QENQSPRNLLNLQGSLS------EEVK--EEKGALTPSRGQSFTSKQSRNVERKPGECLE 735
             EN+   +  +L+ S S      + +K  + K A    +  +F+  +S    + P     
Sbjct: 655  GENKDRLDKADLRLSKSTPPSNLDLIKQLDSKAAKQGKKADTFSLVRS---SQAPSLLQL 711

Query: 736  SASSLSSGLQRWGQVSCPIRFKTHCHEKSVEP---TPIPKTQMSTHSPLLRKISLGSNFI 792
                LSS +    +VS P+   +    +SV P    P P  + +T  P +  +S      
Sbjct: 712  KDVVLSSAIDLRPKVSKPVLTPSGVSSRSVSPFSRRPSPP-RSATPVPTMSGLSF----- 765

Query: 793  PIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEA 852
                ++   L ++N++LN+E  +LR Q  +L ++C+    ++Q+  +KI+EA ++A EE+
Sbjct: 766  --TKSIADSLKKTNELLNQEALKLRTQVESLRQRCEFQELELQKSAKKIQEAMAVAAEES 823

Query: 853  EKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVD-ANLPPKLDTD--KHPEVKLPKDRK 909
             K KAAK++IK+L  +L  ++E++       E +  + LP  L+T+   +P+    +  +
Sbjct: 824  AKSKAAKDVIKSLTAQLKDMAERLPPGVYDTESMKLSYLPNGLETNGIHYPDTNGGRHSR 883

Query: 910  VDSL----CSSP-----------IVFSNKLKSVYGRELCHD-------NSSGSVEDSKVA 947
             DS+     +SP           +  +   +   G     D       N  G V+ S  +
Sbjct: 884  SDSIRGTSLASPTRSDSTSINGTLSIAQSFRDSPGTNGRDDHLAARLSNGGGGVQPSGNS 943

Query: 948  RTE---------PQ--QKGTKAS-----------KLEYAEQYEPGIYITFTTLPSGQKGL 985
             +E         PQ    G K+            + E+ EQYEPG+YIT   L  G + L
Sbjct: 944  MSEAIDGKEPWSPQDGDNGMKSRDSSLVANGNQVEAEWIEQYEPGVYITLVALRDGTRDL 1003

Query: 986  KRVRFSRRRFTEKAAERWWEENQVVVYQKYGIE 1018
            KRVRFSRRRF E  AE WW EN+  VY+KY ++
Sbjct: 1004 KRVRFSRRRFGEHQAETWWSENREKVYEKYNVK 1036



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 61/86 (70%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S   E+ L+L S++KII GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 46  DETTLIWISSGGERSLKLASISKIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRT 87
           CKDKV+AE W  GL+A ISS +  R+
Sbjct: 106 CKDKVEAEVWIAGLKALISSSQGGRS 131


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 303/692 (43%), Positives = 412/692 (59%), Gaps = 40/692 (5%)

Query: 212 IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
           +E  D L DV IWGEG   G +GG        + T++DA  PK LES+V+LDVQNIS G 
Sbjct: 258 LEDFDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANTPKSLESSVVLDVQNISCGN 317

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +HA LVTK+GE F WGE   GRLGH    DVS PKL++   G+NV+ ++CGE+ +CA+T 
Sbjct: 318 RHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTS 377

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG++YTWG     + L+G R   SHW+P+K+   ++G+RVS V+CG WHTA+++++G+LF
Sbjct: 378 SGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLF 437

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM--VDRCKSNAI 449
           T+GDGTFG LGHG+      P+EVE+  GLK   VACG WHTAA+V++M  +D   S+A 
Sbjct: 438 TFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAP 497

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G LFTWGD DKG+LGH D + +L P C+T LVD  F + +C   +TV LT  G+VYTMG
Sbjct: 498 SGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMG 557

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           S V+GQLG P A   S   VE  L +  V+ IS GS+HVAVLTS   VYTWGK  NGQLG
Sbjct: 558 SNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLG 617

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
            GD + + TPT V+ LRD+QV+ +VCGS+ +AAIC+H      D S C  CR+PF FRRK
Sbjct: 618 HGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWALSADNSICFGCRIPFNFRRK 677

Query: 630 KHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSP 689
           +HNCYNCG  FC ACS+KK + ASL P+  KP RVCD CY+ LQK   S    +      
Sbjct: 678 RHNCYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCYDKLQKAIESEPFSRVPKVKA 737

Query: 690 RNLLNLQGSLSEEVKEEKG-ALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQR-- 746
            N L      SE+  +E G  L        +S  S N  +     ++   + +S  Q   
Sbjct: 738 GNALY---KASEQTDKESGFPLLVGHTSRLSSSDSFNRAQGRISRVDQYENRASSFQNEN 794

Query: 747 -----WGQVSCPIR-FKTHCHEKSVEPTPIPKTQM--STHSPLLRKISLGSNFIP----- 793
                +     PI  F+     KS+    +P T++   + SPLL K S   + IP     
Sbjct: 795 PPRESFSLSKSPISAFRV---SKSLFSASLPSTRVVPQSTSPLLGKASALWSAIPAPYPP 851

Query: 794 --IASTVEKDLSESNKMLNEEVQRLRDQ-----------ARNLEK---QCQIGNQKVQEC 837
              A  V  +L   N  L++EV++L+ Q           A  LE+   + Q+   ++   
Sbjct: 852 VRTAEVVVDNLKPINDSLSQEVKQLKAQLEAMLLGLFKNANGLEELASKSQLLEAELGRK 911

Query: 838 QQKIEEAWSLAREEAEKCKAAKEIIKALAVRL 869
            +++ +A + A  EAEK +AAK +IK+L  ++
Sbjct: 912 TKQLMDATAKAAVEAEKRRAAKHVIKSLTAQV 943



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  ++WY  ++EKQL L  V++II GQRT  FQ  P+P+++ QSFS+I    +RSLDLI
Sbjct: 68  DESAVVWYHDKEEKQLELCHVSRIIPGQRTAIFQQYPRPEKEYQSFSLIC--NDRSLDLI 125

Query: 62  CKDKVQAESWFLGLRAAISSCR 83
           CKDK +AE W  GL+A I+  R
Sbjct: 126 CKDKDEAEVWITGLKAIITRGR 147


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 271/619 (43%), Positives = 403/619 (65%), Gaps = 21/619 (3%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +H+A+VT++GEVF WGE   GRLG  +  DV+ P+LVE L+   V  V+CGEF TCA+T 
Sbjct: 247 RHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            GE+YTWG   H A L+G     SHW+P+++   L+G++V+ VACG WHTA++S++GQLF
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           T+GDGTFGVLGHG+  ++S P+EV+SL GL+  +VACG WHTAA+V++++ +  ++   G
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSG 426

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           KLFTWGD DK RLGH D E +L PTCV  L+D++F + +CG  +T+GLT  G+V+T+GS+
Sbjct: 427 KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSS 486

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           V+GQLGNP A  +   +VE KL  E  + ++ G+YHV VLTS   VYTWGK ANG+LG G
Sbjct: 487 VYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHG 546

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
           D ++R++PT VE+L+D+ V+ + CGS+ +AAICLHKS+S  +QS CS CR  FGF RK+H
Sbjct: 547 DVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGFTRKRH 606

Query: 632 NCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRN 691
           NCYNCGL  C +CS+KK + A+L P   K  RVCD+CY  L K++ SG   ++ N  PR 
Sbjct: 607 NCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSESGSNYRK-NAVPRL 665

Query: 692 LLNLQGSLSE-EVKEEKGALTP-SRGQSFTSKQSRNVERKPGECLESASSLSSGLQ-RWG 748
               +  L + + +  K AL+     +   SK ++  +R     +   +   S LQ + G
Sbjct: 666 SGENRDKLDKSDTRPPKTALSNMDLIKQLDSKAAKQGKRTDTFAVVRPTQAHSLLQLKDG 725

Query: 749 QVSCPIRFKTHCHEKSVEPTPIPK---TQMSTHSPLLRKISLGSNFIPIAST-------- 797
            +   +        + + P PIP        + SPL R+ S   +  P+ +         
Sbjct: 726 PIPNTVDI------RRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASGLSFSKG 779

Query: 798 VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKA 857
           +   L ++N++LN+EV  LR Q  +L K+C++   ++++ ++K EEA ++A EE+ K KA
Sbjct: 780 IADSLKKTNELLNQEVLMLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESAKSKA 839

Query: 858 AKEIIKALAVRLHTLSEKI 876
           AKE+I +L  ++  ++E++
Sbjct: 840 AKEVITSLTAQIKHMAERL 858



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 36/286 (12%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVM-LDVQNISLGAKHAALVT 278
           ++  WG+GV    + G        N T V   +PK +   +  L V  ++ G  H AL++
Sbjct: 309 ELYTWGDGVHNAGLLG--------NGTDVSHWMPKRISGILEGLQVAYVACGPWHTALIS 360

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK------- 331
             G++F +G+G  G LGH     +S P+ V+ L+G+   +V+CG + T A+ +       
Sbjct: 361 STGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSS 420

Query: 332 ----SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               SG+++TWG  +      G++  R   L       L      K+ACG   T  ++TS
Sbjct: 421 TSIPSGKLFTWGDGDKNRLGHGDKEPR---LKPTCVPALIDYNFHKIACGHSITIGLTTS 477

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           GQ+FT G   +G LG+ +     QP  VE  L G   + VACG +H      +MV   K+
Sbjct: 478 GQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGESAEEVACGAYH------VMVLTSKN 530

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                +++TWG    GRLGH D E +  PT V  L D      +CG
Sbjct: 531 -----EVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACG 571



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/56 (62%), Positives = 42/56 (75%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+YIT T L +G + LKRVRFSRRRF E  AE WW EN+  VY+KY +
Sbjct: 1011 EWIEQYEPGVYITLTALRNGTRDLKRVRFSRRRFGEHQAESWWSENRDKVYEKYNV 1066



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 233 IGGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKD 291
           +G +V G +       D   P L+E  ++ +  + ++ GA H  ++T + EV+ WG+G +
Sbjct: 483 VGSSVYGQLGN--PHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGAN 540

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           GRLGH    D   P LVE L   +V+ ++CG   + A+
Sbjct: 541 GRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/459 (53%), Positives = 322/459 (70%), Gaps = 2/459 (0%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WGE +    +    D +V ++  + D L PK LES ++LD  ++  G KH+ALVTK
Sbjct: 36  DVYVWGEVICDNSVRTGSD-TVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTK 94

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            GEVF WGE   GRLGH    D   P+L+E L+  NV  V+CGEF TCA+T +GE+YTWG
Sbjct: 95  NGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWG 154

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              H   L+G  +  SHW+P+++   L+G+ V+ V+CG WHTA+++T GQLFT+GDGTFG
Sbjct: 155 DGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFG 214

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           VLGHGN +++S PKEVESL GLK  SVACG WHTAAIV+++V +  S+   GKLFTWGD 
Sbjct: 215 VLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDG 274

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           DK RLGH D E +L PTCV  L+D+DF + +CG  LTVGLT  GKV +MG+ V+GQLGNP
Sbjct: 275 DKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNP 334

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           ++  +   +VE  + E  V+ ++ GSYHVAVLT    V+TWGK ANG+LG GD ++R+ P
Sbjct: 335 RSDGKIPCLVEEIVGENVVQ-VACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIP 393

Query: 580 TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
           T VEALRDR V  + CG++ TAAIC HK +S  +QS C+ CR PFGF RK+HNC+NCGL 
Sbjct: 394 TLVEALRDRSVRHIACGANFTAAICQHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLV 453

Query: 640 FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHS 678
            C+AC+++K + A+L PN  KP RVCD+C+  L     S
Sbjct: 454 HCNACTSRKAVRAALAPNPAKPYRVCDSCFLKLNNAVDS 492


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/710 (38%), Positives = 396/710 (55%), Gaps = 74/710 (10%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           L DV +WGE +  G +GG +  S S +    D+ LPK+L+S V LD Q+IS G  +A LV
Sbjct: 255 LCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLV 314

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           TK+G+++ WGE   GRLGH V   V  PKL++  +G  V+   CGEF TCA+T SG++Y 
Sbjct: 315 TKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYA 374

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  +H A L+G     SHW P ++   ++G+ V  ++CG WHTA V++ G+LFT+GDGT
Sbjct: 375 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGT 434

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           FG LGHG+  + + P+EVE+L G +    ACG WH+AA+V +  +   S    GKLFTWG
Sbjct: 435 FGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSS----GKLFTWG 490

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           D D GRLGH D E +L+P+CVT L    F Q +CG+ +TV L+  G+VY MG+A      
Sbjct: 491 DGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTA------ 544

Query: 518 NPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +P     R+ + +EG L + FV+ ++ G +H+AVL S   VYTWGK +NGQLG GD++ R
Sbjct: 545 DPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYR 604

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNC 636
             PT V+AL+ +QV  VVCGS+ TA ICLHK I+  D + CS CR PF + RK HNCYNC
Sbjct: 605 CMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPFNYMRKLHNCYNC 664

Query: 637 GLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL- 695
           G  FC++C++KK + A++ P   +P RVCD CY  L+ I       ++   +P N     
Sbjct: 665 GSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGI-------RESLATPANSARFS 717

Query: 696 QGSLSEEVKEEKGALTPSR--------------------------GQSFTSKQSRNVERK 729
             SL    + ++  +TP R                          G S TS    N++ K
Sbjct: 718 NASLPSSYEMDEIGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSCTSSIHSNMDIK 777

Query: 730 PGECLESASSLS----------SGLQRW------GQVSCPIRFKTHC-----HEKSVEPT 768
               L+    LS           G QR          S  IR    C        SVE  
Sbjct: 778 GSFNLKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGLPFSRRGSVELF 837

Query: 769 PIPKTQMSTHSPLLRKISLGSNF---IPIASTVEKDLSESNKMLNEEVQRLRDQARNLEK 825
           P     +S  S  +  ++  S+F   I     +++   +SN+ L+ E+  L+ Q   L  
Sbjct: 838 P-----LSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQVEELTL 892

Query: 826 QCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEK 875
           + +    ++ +  +K+E A  +AR++AEK K+++EI+++L ++L   ++K
Sbjct: 893 KSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQLMNTTKK 942


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/710 (38%), Positives = 396/710 (55%), Gaps = 74/710 (10%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           L DV +WGE +  G +GG +  S S +    D+ LPK+L+S V LD Q+IS G  +A LV
Sbjct: 252 LCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLV 311

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           TK+G+++ WGE   GRLGH V   V  PKL++  +G  V+   CGEF TCA+T SG++Y 
Sbjct: 312 TKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYA 371

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  +H A L+G     SHW P ++   ++G+ V  ++CG WHTA V++ G+LFT+GDGT
Sbjct: 372 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGT 431

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           FG LGHG+  + + P+EVE+L G +    ACG WH+AA+V +  +   S    GKLFTWG
Sbjct: 432 FGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSS----GKLFTWG 487

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           D D GRLGH D E +L+P+CVT L    F Q +CG+ +TV L+  G+VY MG+A      
Sbjct: 488 DGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTA------ 541

Query: 518 NPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +P     R+ + +EG L + FV+ ++ G +H+AVL S   VYTWGK +NGQLG GD++ R
Sbjct: 542 DPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYR 601

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNC 636
             PT V+AL+ +QV  VVCGS+ TA ICLHK I+  D + CS CR PF + RK HNCYNC
Sbjct: 602 CMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPFNYMRKLHNCYNC 661

Query: 637 GLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNL- 695
           G  FC++C++KK + A++ P   +P RVCD CY  L+ I       ++   +P N     
Sbjct: 662 GSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGI-------RESLATPANSARFS 714

Query: 696 QGSLSEEVKEEKGALTPSR--------------------------GQSFTSKQSRNVERK 729
             SL    + ++  +TP R                          G S TS    N++ K
Sbjct: 715 NASLPSSYEMDEIGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSCTSSIHSNMDIK 774

Query: 730 PGECLESASSLS----------SGLQRW------GQVSCPIRFKTHC-----HEKSVEPT 768
               L+    LS           G QR          S  IR    C        SVE  
Sbjct: 775 GSFNLKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGLPFSRRGSVELF 834

Query: 769 PIPKTQMSTHSPLLRKISLGSNF---IPIASTVEKDLSESNKMLNEEVQRLRDQARNLEK 825
           P     +S  S  +  ++  S+F   I     +++   +SN+ L+ E+  L+ Q   L  
Sbjct: 835 P-----LSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQVEELTL 889

Query: 826 QCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEK 875
           + +    ++ +  +K+E A  +AR++AEK K+++EI+++L ++L   ++K
Sbjct: 890 KSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQLMNTTKK 939


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/456 (48%), Positives = 301/456 (66%), Gaps = 13/456 (2%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV IWGE    G              ++ D L P+LLES V+LDV++I  G  H A+V++
Sbjct: 61  DVYIWGEVFADG------------FPSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSR 108

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           EG+VF WGE   GRLGH ++ D   P LVE    + +  V+CGEF T A++K    +TWG
Sbjct: 109 EGKVFTWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFTWG 168

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              H   L+G     SHW+P+ +   LDG+RV  VACG WH+A+ +++G+LFT+GDGTFG
Sbjct: 169 DGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSALATSNGKLFTFGDGTFG 228

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           VLGHG+ ++V  PKEV+ L GLK   VACG WHTAAI+++   +  SNA   KLFTWGD 
Sbjct: 229 VLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAF-QSGSNASSWKLFTWGDG 287

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           DK RLGH + +  L PT V+ L++++F Q +CG  +TV LT  G V+TMGS  +GQLGNP
Sbjct: 288 DKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNP 347

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            A  +  T+V+ KL  EF++ IS G++HVA +TS   +YTWGK +NG+LG GD+ +R++P
Sbjct: 348 NAAGKVPTLVQDKLLGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSP 407

Query: 580 TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
           T V AL+DR ++++ CGS+ T+ +C  K +S  DQS C  CR PFG  R +HNC NCGL 
Sbjct: 408 TLVLALKDRHLKNISCGSNFTSCVCNQKYVSGTDQSVCFGCRQPFGLTRIRHNCNNCGLV 467

Query: 640 FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
           FC  CS+KK I A++ P   KP RVCDTCY  L+ +
Sbjct: 468 FCHNCSSKKAIKAAMAPTLDKPHRVCDTCYTKLKVV 503



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 35/107 (32%)

Query: 935  DNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRF---- 990
            +NSS S++ S+  R    Q         + E+++ G+Y   T    G K  KRV+F    
Sbjct: 973  ENSSTSLDSSRHERPPETQ---------FFEKFQSGVYALLTLRADGIKIFKRVKFRTFG 1023

Query: 991  ----------------------SRRRFTEKAAERWWEENQVVVYQKY 1015
                                  + RRFT+  AE WW +N+  V +KY
Sbjct: 1024 SPQLETKRSKKTAILKDQKCNYNGRRFTDTQAEEWWRQNKGRVLRKY 1070


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/699 (38%), Positives = 397/699 (56%), Gaps = 43/699 (6%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D    V IWGE VL    G + DG  +Q  ++ D L+PK LES V LDV +I+ GA H A
Sbjct: 155 DSFHAVYIWGE-VLAN--GVSPDGIGTQIPSKTDVLIPKALESNV-LDVCHIATGAHHIA 210

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           + T++G VF WG+   GRLGH ++ D S P LVE L G N + V+CGE+ T AL+KS E+
Sbjct: 211 IATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFLEGNNFEFVACGEYHTSALSKSFEL 270

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           YTWG   H   L+G     SHW+P+ +   L+G++V  +ACG WH+A+ +++G+LFT+GD
Sbjct: 271 YTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGLQVVSIACGTWHSALATSNGKLFTFGD 330

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G FGVLGHG+ ++V  PKEV+ L GLK   VACG WHTAAI+++   +  SN+   KLFT
Sbjct: 331 GAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVWHTAAIIEVAF-QSGSNSSSWKLFT 389

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD D  RLGH + E  L PT V  L++++F Q  CG  +T+ LT  G V+TMG   HGQ
Sbjct: 390 WGDGDMHRLGHGNKETYLQPTRVAPLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQ 449

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LGNP +  +  T+V+ KL  EFV+ IS G++HVA+LT+   +YTWG  ANG+LG GD ++
Sbjct: 450 LGNPMSLGKIPTLVQDKLLGEFVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVED 509

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R++PT V AL+DR +++V CGS+ T+ IC+HK +S  DQS  +  R  FG  +K+HNC+N
Sbjct: 510 RKSPTLVVALKDRNIKNVSCGSNFTSCICVHKWVSETDQSIYNGFRQAFGLTKKRHNCHN 569

Query: 636 CGLHFCSACSTKKIINA-SLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSP-RNLL 693
           CGL    ACS+KK + A +LTP   KP RVCD C   L+ +  +G        +P  + +
Sbjct: 570 CGL----ACSSKKTLKATTLTPTPEKPHRVCDNCNVKLKVVNDNGASKLDRKVTPSHHSI 625

Query: 694 NLQGSLSE-EVKEEKGALTPSRGQSFTSKQSRNVERK---PGECLESASSLSSGLQRWGQ 749
           N    L +  ++  +  L+P       ++  + +E K   P    +S S +     R  Q
Sbjct: 626 NGNERLGQGTIRSTRTLLSP------ITEPIKYLEIKNSNPKNKFDSTSFI-----RASQ 674

Query: 750 VSCPIRFKTHCHEK----------------SVEPTPIPKTQMSTHSPLLRKISLGSNFIP 793
           V   ++ K                      S   TP P T         RK S      P
Sbjct: 675 VPSHVQLKDIAFPSSLSSSQSVLKSTIPLASPPRTPPPHTNSGPIFTNTRKQSPTRLASP 734

Query: 794 -IASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEA 852
               ++  +L  +N  LN+EV +L++Q ++L+++  + + ++++  +K+ EA + +  E+
Sbjct: 735 RYFGSLNNNLRRTNDALNQEVSKLQNQIQSLKQRSDMQDVEIKKLNKKVVEAIAFSAVES 794

Query: 853 EKCKAAKEIIKALAVRLHTLSEKISAAKEAKEGVDANLP 891
                 KE  ++   +   L       KE  E +   +P
Sbjct: 795 SNHGVTKEFFESTVYQSAFLDLGFIQLKEITEKLPQKIP 833



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 38/61 (62%)

Query: 957  KASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYG 1016
            K  +++  E++E G+Y+       G K  KRV+FS+RRFTE  AE WW +N+  V ++Y 
Sbjct: 1094 KQGEIQVIEKFERGVYVILMLQSDGTKIFKRVKFSKRRFTENQAEEWWNQNKSRVLREYS 1153

Query: 1017 I 1017
            I
Sbjct: 1154 I 1154


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/463 (47%), Positives = 299/463 (64%), Gaps = 12/463 (2%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           L DV +WGE +  G +GG +  S S +    D+ LPK+L+S V LD Q+IS G  +A LV
Sbjct: 260 LCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLV 319

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           TK+G+++ WGE   GRLGH V   V  PKL++   G  V+   CGEF TCA+T SG++Y 
Sbjct: 320 TKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYA 379

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  +H A L+G     SHW P ++   ++G+ V  ++CG WHTA V+++G+LFT+GDGT
Sbjct: 380 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGT 439

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           FG LGHG+  + + P+EVE+L G +    ACG WH+AA+V +  +   S    GKLFTWG
Sbjct: 440 FGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSS----GKLFTWG 495

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           D D G+LGH D   +L+P  VT L    F Q +CG+ +TV L+  G+VY MG+A      
Sbjct: 496 DGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTA------ 549

Query: 518 NPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           +P   D  R+ + +EG L + FV+ ++ G +H+AVL S   VYTWGK +NGQLG GD++ 
Sbjct: 550 DPSQDDVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEY 609

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R  PT V+AL+ +QV  VVCGS+ TA ICLHK I+  D S CS CR PF + RK HNCYN
Sbjct: 610 RRMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSSRCSGCRHPFNYMRKLHNCYN 669

Query: 636 CGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHS 678
           CG  FC++C++KK + A++ P   +P RVCD CY  L+ I  S
Sbjct: 670 CGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRES 712


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/619 (42%), Positives = 373/619 (60%), Gaps = 44/619 (7%)

Query: 281 GEVFCWGE---------GKDGR-LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
           G+V+ WGE         G D          D+  PK +E    ++V  V+CG      +T
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD---------GVRVSKV-ACGEWH 380
           +  E++TWG    G   +G     S + PR L ++L          G++V K+ +CG WH
Sbjct: 278 RQAEVFTWGEECSGR--LGHGAGTSIFQPR-LVESLSICNVETLPVGLQVVKLLSCGTWH 334

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA+ ++SG+L+T+GDGTFGVLGHGN + +S PKEVESL+GL+  SV+CG WHTAA+V+++
Sbjct: 335 TALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 394

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
           +   +SN   GKLFTWGD DK RLGH D   KL PTCV  L+D++F +A CG  LT+GLT
Sbjct: 395 M--AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 452

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G ++T GS+V+GQLGNP    R   +VE KL    V  +  G+YHVAVLT  G VYTW
Sbjct: 453 TSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTW 512

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           GK ANG+LG GD  +R+TPTFVEALRDR V+ + CGS  TAAIC HKS+S  +QS CS C
Sbjct: 513 GKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSC 572

Query: 621 RMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGR 680
           R PFGF RK+HNCYNCGL  C +CS+KK + A+L+PN GKP RVCD+CY  L K+  SG 
Sbjct: 573 RQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDSG- 631

Query: 681 LLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSL 740
           +   +N +PR    + G    +  + KG    S   + +S   +N++ K       A+  
Sbjct: 632 IGHNKNNTPR----IPGDSKADKMDSKGNRVAS---ANSSDMIKNLDVK-------AAKQ 677

Query: 741 SSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPIASTVEK 800
           +       Q    ++ K      + +  P   T     SPLLR  +L S+    + + + 
Sbjct: 678 TKKYDYPPQFPAILQLKDIPFIGAADQQPNDSTY---SSPLLRLPNLNSSSSLSSESFDI 734

Query: 801 DLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKE 860
            L ++N++L +EVQ+L+++  +L +Q +  +  +Q+ + K  EA +LA EEA K KAAK+
Sbjct: 735 -LRDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAHEAMTLASEEASKSKAAKD 793

Query: 861 IIKALAVRLHTLSEKISAA 879
           +IK+L  +L  ++E++  A
Sbjct: 794 VIKSLTAQLKEMAERLPPA 812



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+Y+T  +L  G K LKRVRFSRRRF E  AE WW +N+  VY KY +
Sbjct: 945  EWIEQYEPGVYLTLVSLRDGTKELKRVRFSRRRFGEHQAESWWNDNREKVYDKYNV 1000


>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 278/697 (39%), Positives = 401/697 (57%), Gaps = 56/697 (8%)

Query: 371  VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
            V  +ACG  H A+V+  G++F++G+ + G LGHG   +V  PK ++SL    ++ VACG 
Sbjct: 246  VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGE 305

Query: 431  WHTAAIV---DIMV------------------DRCKS-NAIGGKLFTWGDADKGRLGHVD 468
            +HT A+    D+                     R  + N   GKLFTWGD DKGRLGH D
Sbjct: 306  YHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLGHGD 365

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
             E KL+PTCV  LVD +F + +CG  LTV LT  G VYTMGS V+GQLGNP+A  +  T 
Sbjct: 366  KEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTR 425

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            VEGKL + FV+ I+ G+YHVAVLTS   VYTWGK ANG+LG GD+ +R +PT VEAL+D+
Sbjct: 426  VEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDK 485

Query: 589  QVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
            QV+S+ CG++ TA ICLHK +S  DQS CS CR+PF F+RK+HNCYNCGL FC +CS+KK
Sbjct: 486  QVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKK 545

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKG 708
             + AS+ PN  KP RVCD C++ L+K   +     Q   S R + N QG L+E + +++ 
Sbjct: 546  SLKASMAPNPNKPYRVCDNCFSKLRKAIETD-ASSQSAVSRRGVTN-QG-LNELIDKDEK 602

Query: 709  ALTPSRGQ--SFTS----KQSRNVERKPGECLESASS----LSSGLQRWGQVSCPIRFKT 758
              + SR Q   F+S    KQ+ +   K  + LE  SS    + +G  +WG     +    
Sbjct: 603  LDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNGGSQWGGALKSLN-PV 661

Query: 759  HCHEKSVEPTPIPKTQM--STHSPLLRKISLGSNFIPIAS--------TVEKDLSESNKM 808
                K      +P +++   T SP+ R+ S      P  +         V  D   +N  
Sbjct: 662  FGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTNDS 721

Query: 809  LNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVR 868
            L++EV +LR Q  NL ++ Q+   +++   ++++EA ++A EE  +CKAAKE+IK+L  +
Sbjct: 722  LSQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEETARCKAAKEVIKSLTAQ 781

Query: 869  LHTLSEK--ISAAKEAKEGVDANL---PPKLDTDKHPEVKLP---KDRKVDSLCSSPIVF 920
            L  ++E+  + AA+  K     +L   P   D       ++      ++ D   S+  + 
Sbjct: 782  LKDMAERLPVGAARNTKSPSFTSLGSNPASSDLSSLSIDRINGQITSQEPDLNGSNGQLL 841

Query: 921  SNKLKSVYGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPS 980
            SN   +   R   H N  G +E + +      ++    +  E+ EQ EPG+YIT T+LP 
Sbjct: 842  SNGSSTTNNRSSGH-NRLGHLE-ATIRNGSRTKESEHRNDNEWVEQDEPGVYITLTSLPG 899

Query: 981  GQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            G K LKRVRFSR+RF+EK AE+WW EN+  V+++Y +
Sbjct: 900  GVKDLKRVRFSRKRFSEKQAEQWWAENRARVHERYNV 936



 Score =  212 bits (540), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 235/478 (49%), Gaps = 67/478 (14%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW+SG++EK L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 47  DESVLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 104

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLG------ 115
           CKDK +AE WF GL+A IS     R +       G+ S  +SP +Y RR   L       
Sbjct: 105 CKDKDEAEVWFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSA 164

Query: 116 --LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLSNIIT 171
             L +D  +  ++ S   SP  S+ E+ FSD + Y+     F+ S+S+S  + +   +  
Sbjct: 165 DSLQKDGGDHLRLHSPYESPPKSVMEKAFSDVILYAVPPKGFFPSDSASGSVHSFHRV-- 222

Query: 172 PSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGG 231
            S   M+ ++ +   L  A     +N    +      + L+ ++    ++  WGE   GG
Sbjct: 223 GSCFGMKMDSLLPKALESAVVLDVQN----IACGGRHAALVTKQG---EIFSWGEES-GG 274

Query: 232 DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT------------- 278
            +G  VD          D L PKL++S    +++ ++ G  H   VT             
Sbjct: 275 RLGHGVDS---------DVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTY 325

Query: 279 --------------------KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
                                 G++F WG+G  GRLGH        P  V  L   N   
Sbjct: 326 NFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCR 385

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           V+CG   T ALT SG +YT G   +G   +G  ++    LP ++   L    V ++ACG 
Sbjct: 386 VACGHSLTVALTTSGHVYTMGSPVYGQ--LGNPQADGK-LPTRVEGKLAKSFVEEIACGA 442

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           +H A++++  +++T+G G  G LGHG+  + + P  VE+L+  +VKS+ACG   TA I
Sbjct: 443 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATI 500



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 32/193 (16%)

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
           PK +ES   L V+++ACG  H A +              G++F+WG+   GRLGH     
Sbjct: 235 PKALESAVVLDVQNIACGGRHAALVTK-----------QGEIFSWGEESGGRLGHGVDSD 283

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG-QLGNPKAKDRSITVVE 530
            L P  +  L + +    +CG   T  +T  G +YT G   +     NP           
Sbjct: 284 VLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFVFQNP----------- 332

Query: 531 GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
                    G  S S   A+  S G ++TWG    G+LG GD + +  PT V AL D   
Sbjct: 333 ---------GKWSPSRATALNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNF 383

Query: 591 ESVVCGSSITAAI 603
             V CG S+T A+
Sbjct: 384 CRVACGHSLTVAL 396


>gi|94983836|gb|ABF50623.1| G93-GW [Glycine max]
          Length = 466

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/476 (49%), Positives = 307/476 (64%), Gaps = 31/476 (6%)

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGF 626
            QLGLGD+++R TP FVEALRDRQV ++ CG S TAAI LHK IS+ DQS+C+ CR+PFGF
Sbjct: 2    QLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTCTGCRLPFGF 61

Query: 627  RRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQEN 686
             RKKHNCYNCGL FC ACS+KKI NA L P+K K  RVCD C++  Q   HS    K  N
Sbjct: 62   TRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQGGAHSVMASKSRN 121

Query: 687  QSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPG------------ECL 734
             + + +L  Q  +S +V E++G  T ++G   +  QS   +  P             + +
Sbjct: 122  YNTQQVLKHQHKIS-DVTEDRGETTVTQGPMLSLGQSCYRKSMPSGRKDWKNHQEIQQDV 180

Query: 735  ESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIPI 794
            E +SS+  G+ +WGQV CP  F+ +C E  V      K +++T SP     ++ S     
Sbjct: 181  EDSSSMLGGMPQWGQVPCPAMFQINCTENPVVHVSSSKNKLATVSPF----NVESTAYNF 236

Query: 795  ASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEK 854
            +S VE D ++S+K+L EEV RLR +A+ LE+QC++ N+K+QEC+QKIEE+W +AREEA K
Sbjct: 237  SSNVETDTTKSDKVLLEEVHRLRAEAKRLEEQCELKNRKIQECRQKIEESWFVAREEAAK 296

Query: 855  CKAAKEIIKALAVRLHTLSEKI-SAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSL 913
            CKAAKE+IKALA+R   +  +  +  +E K G +  +P       H E+K P+D  VDSL
Sbjct: 297  CKAAKEVIKALALRARVVDARAGNVGQEGKAGPNEFVPNVAPI--HTEMKSPRDVNVDSL 354

Query: 914  CSSPIVFSNKLKSVYGRELCH--DNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGI 971
             +SPIVFS+ LKS +GR L    DNS+         R E QQ      K E+ EQYEPG+
Sbjct: 355  SNSPIVFSDTLKSKFGRSLFPKIDNSN---------RAESQQDNIDGLKAEWVEQYEPGV 405

Query: 972  YITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEYSNLNQNQ 1027
            YITFTTL  G+KGLKRVRFSR+RF+EK AE+WWEENQ  VY KYGIE Y N N +Q
Sbjct: 406  YITFTTLQCGKKGLKRVRFSRKRFSEKEAEKWWEENQGTVYHKYGIEGYINNNTSQ 461


>gi|22770461|gb|AAN06607.1| chromosome condensation regulator protein [Cicer arietinum]
          Length = 358

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 159/279 (56%), Positives = 205/279 (73%)

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           VLGHG+ +N+S P+EVESL GL+  + ACG WHTAAIV+++V +  ++   GKLFTWGD 
Sbjct: 1   VLGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDG 60

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           DK RLGH D + +L PTCV+ L+D++F + +CG  LTVGLT  G V+TMGS V+GQLGNP
Sbjct: 61  DKNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 120

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           ++  +   +VE KL  E V+ I+ G+YHV VLTS   VYTWGK ANG+LG GD ++R+ P
Sbjct: 121 QSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMP 180

Query: 580 TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
           T VEAL+DR V+ + CGS+ +AAICLHK +S  +QS CS CR  FGF RK+HNCYNCGL 
Sbjct: 181 TLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLV 240

Query: 640 FCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHS 678
            C +CS++K   A+L PN GKP RVCD+CY  L KI  S
Sbjct: 241 HCHSCSSRKAFRAALAPNPGKPYRVCDSCYTKLIKIAES 279



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 14/195 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTK-----------EGEVFCWGEGKDGRLGHKVNMD 301
           P+ +ES   L     + G  H A + +            G++F WG+G   RLGH     
Sbjct: 13  PREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGDKNRLGHGDKDA 72

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
              P  V  L   N   ++CG   T  LT SG ++T G   +G   +G  +S    LP  
Sbjct: 73  RLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQ--LGNPQSDGK-LPCL 129

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           + D L G  V ++ACG +H  ++++  +++T+G G  G LGHG++++   P  VE+L+  
Sbjct: 130 VEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMPTLVEALKDR 189

Query: 422 KVKSVACGPWHTAAI 436
            VK +ACG  ++AAI
Sbjct: 190 HVKYIACGSNYSAAI 204



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 29/212 (13%)

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK-----------SGEIYTWGHNN 342
           LGH    ++S P+ VE LSG+   + +CG + T A+ +           SG+++TWG  +
Sbjct: 2   LGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGD 61

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
                 G++ +R   L       L      ++ACG   T  ++TSG +FT G   +G L 
Sbjct: 62  KNRLGHGDKDAR---LEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQL- 117

Query: 403 HGNLQNVSQ-PKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            GN Q+  + P  VE  L G  V+ +ACG +H    V ++  +        +++TWG   
Sbjct: 118 -GNPQSDGKLPCLVEDKLAGECVEEIACGAYH----VTVLTSK-------NEVYTWGKGA 165

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
            GRLGH D E + +PT V  L D      +CG
Sbjct: 166 NGRLGHGDIEDRKMPTLVEALKDRHVKYIACG 197



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 247 QVDALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           Q D  LP L+E  +  + V+ I+ GA H  ++T + EV+ WG+G +GRLGH    D   P
Sbjct: 121 QSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMP 180

Query: 306 KLVECLSGINVQSVSCGEFQTCAL 329
            LVE L   +V+ ++CG   + A+
Sbjct: 181 TLVEALKDRHVKYIACGSNYSAAI 204


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  330 bits (846), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 173/358 (48%), Positives = 232/358 (64%), Gaps = 29/358 (8%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG---INVQSVSCGEFQTCALTKSGEIYT 337
           G+V+ WGE             V C  LV+ L     ++V  ++CG      +T+ GEI+T
Sbjct: 237 GDVYIWGE-------------VICDNLVKPLESNVVLDVHHIACGVRHAALVTRQGEIFT 283

Query: 338 WGHNNHGADLVGERRSRSHWLPRKL----FDTLD-------GVRVSKVACGEWHTAIVST 386
           WG  + G   +G    R    PR +    F ++D       G++V+ V CG WHTA+V+T
Sbjct: 284 WGEESGGR--LGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTT 341

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           + QLFT+GDGTFGVLGHG+  NV+ P+EVESL GL+  +VACG WHTAA+V+++V +  +
Sbjct: 342 TRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSA 401

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   GKLFTWGD DK RLGH D E +L PTCV  L++++F + +CG  LTVGLT  G+V 
Sbjct: 402 SVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVC 461

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           TMGS V+GQLGNP++  +    VE KL  E V+ I+ G+YHVAVLTS   VYTWGK ANG
Sbjct: 462 TMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANG 521

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPF 624
           +LG GD ++R+TPT VE L+DR V+ + CGS+ TAAICLHK +S   Q   S+   PF
Sbjct: 522 RLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGTVQIFSSRSVSPF 579



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 179/359 (49%), Gaps = 57/359 (15%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           D L DV IWGE +                    D L+ K LES V+LDV +I+ G +HAA
Sbjct: 234 DALGDVYIWGEVI-------------------CDNLV-KPLESNVVLDVHHIACGVRHAA 273

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS------------GINVQSVSCGE 323
           LVT++GE+F WGE   GRLGH V  DV  P+LVE L+            G+ V SV+CG 
Sbjct: 274 LVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGP 333

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + T  +T + +++T+G    G    G++ + ++  PR++ ++L G+R   VACG WHTA 
Sbjct: 334 WHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAY--PREV-ESLSGLRTIAVACGVWHTAA 390

Query: 384 V-----------STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           V            +SG+LFT+GDG    LGHG+ +   +P  V +L     + VACG   
Sbjct: 391 VVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSL 450

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T  +              G++ T G    G+LG+   + KL      +L+     + +CG
Sbjct: 451 TVGLT-----------TSGQVCTMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACG 499

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
                 LT   +VYT G   +G+LG+   +DR    +   LK+  VK I+ GS + A +
Sbjct: 500 AYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 558



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 61/86 (70%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW S   E+ L+L SV++II GQRT  FQ   +P++   SFS+IY NG+RSLDLI
Sbjct: 46  DESSLIWISSSGERILKLASVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRT 87
           CKDKV+AE W  GL+A ISS +  R+
Sbjct: 106 CKDKVEAEVWIAGLKALISSGQGGRS 131



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 40/56 (71%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+YIT   L  G + LKRVRFSRRRF E  AE WW EN+  VY++Y +
Sbjct: 829  EWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAENWWSENREKVYERYNV 884



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 66/106 (62%), Gaps = 8/106 (7%)

Query: 779 SPLLRKISLGSNFIPIAST--------VEKDLSESNKMLNEEVQRLRDQARNLEKQCQIG 830
           SP  RK S   +  P+ +T        +   L ++N++LN+EV +LR Q  +L ++C++ 
Sbjct: 577 SPFSRKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLRERCELQ 636

Query: 831 NQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKI 876
             ++Q+  +K++EA  +A EE+ K KAAKE+IK+L  +L  ++E++
Sbjct: 637 ELELQKSAKKVQEAMVVATEESAKSKAAKEVIKSLTAQLKDMAERL 682


>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 186/439 (42%), Positives = 272/439 (61%), Gaps = 35/439 (7%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIW SG++EK+L+L+ V++II GQRT  FQ  P+P+++ QSFS+IY   +RSLDLI
Sbjct: 48  DESVLIWLSGKEEKRLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLI 105

Query: 62  CKDKVQAESWFLGLRAAISSC--RRSRTFSCLREKRGVQSCVSSPASYIRRKHNLG---- 115
           CKDK +AE W  GL+A IS    ++ RT S    + GV S  +SP ++ +R   L     
Sbjct: 106 CKDKDEAEVWLTGLKALISRGHHQKGRTES----RSGVSSEANSPRTHTQRSSPLSSPFG 161

Query: 116 ----LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYS--SDSFYSSESSSSQIQNLS-- 167
               + +D  +  ++ +   SP     E+  SD + Y+    +F+ SES  + + +LS  
Sbjct: 162 SGDSMQKDGVDPLRLHTPYESPPKIGLEKALSDVILYAVPPKAFFPSESGCNSVHSLSSG 221

Query: 168 --NIITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWG 225
             + I      M  + F          R   + +    +   G    +  D L DV IWG
Sbjct: 222 GSDGINGRLKGMGVDAF----------RVSLSSAVSSSSQGSGH---DDGDALGDVFIWG 268

Query: 226 EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
           EG   G +GG V    S +  ++D+ +PK LESAV+LDVQNI+ G +HAALVTK+GEVF 
Sbjct: 269 EGTGDGTLGGGVLRVGSSSSVKMDSFVPKPLESAVLLDVQNIACGGRHAALVTKQGEVFS 328

Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
           WGE   GRLGH V+ DVS PKL++ L  +N++ V+CGE+ +CA+T SG++YTWG  ++  
Sbjct: 329 WGEESGGRLGHGVDSDVSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNF 388

Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
            L+G     SHW+P++L    +G+ VS ++CG WHTA+V+++GQLFT+GDGTFGVLGHG+
Sbjct: 389 GLLGRGNDMSHWVPKRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448

Query: 406 LQNVSQPKEVESLRGLKVK 424
            ++V  P+EVESL+GL+ +
Sbjct: 449 CRSVPIPREVESLKGLRTQ 467



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 192/642 (29%), Positives = 300/642 (46%), Gaps = 85/642 (13%)

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
            PK +ES   L V+++ACG  H A +              G++F+WG+   GRLGH     
Sbjct: 296  PKPLESAVLLDVQNIACGGRHAALVTK-----------QGEVFSWGEESGGRLGHGVDSD 344

Query: 472  KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH--GQLGNPKAKDRSITVV 529
               P  +  L + +    +CG   +  +T  G +YT G   +  G LG  +  D S  V 
Sbjct: 345  VSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLG--RGNDMSHWVP 402

Query: 530  E---GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
            +   G  +   V  IS G +H AV+TS G ++T+G    G LG GD +    P  VE+L+
Sbjct: 403  KRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLK 462

Query: 587  DRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACST 646
              + + +   +S     CL                       K+HNCYNCGL FC +CS+
Sbjct: 463  GLRTQLLFWETS--QKYCL-----------------------KRHNCYNCGLVFCHSCSS 497

Query: 647  KKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQE-------NQSPRNLLNLQGSL 699
            KK +  S+ PN  KP RVCD C++ L+K T +              NQ    L      L
Sbjct: 498  KKSLKTSMAPNPNKPYRVCDNCFSKLRKATETDSSSHSSLSRRGSMNQGLNELAEKDEKL 557

Query: 700  SEEVKEEKGALTPSRGQSFTSKQSRNVERKPGECLESA--SSLSSGLQRWGQVSCPIRFK 757
                  + G    S  QSF   +S    R       S+  S L +G  +W   +    F 
Sbjct: 558  DSRSHVQLGKY--SSMQSFKQVESGTSRRNKKLEFNSSRVSPLPNGASQWSATNNSKSFN 615

Query: 758  -THCHEKSVEPTPIPKTQMSTH--SPLLRKISLGSNFIPI-------ASTVEKDLSESNK 807
                  K      +P +++++   SP  R+ S      P        +S +  D   +N 
Sbjct: 616  PAFPPSKKFISASVPGSRIASRATSPTSRQSSPPRPATPTPILAGLTSSKIVVDAKSTND 675

Query: 808  MLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAV 867
             L++EV +LR Q  NL ++ Q+ + +++   +++++A ++A EE+ KCKAAKE+IK+L  
Sbjct: 676  NLSQEVLKLRAQVENLTRKAQLQDVELERTAKQLKDAIAVAGEESAKCKAAKEVIKSLTA 735

Query: 868  RLHTLSEK--ISAAKEAKEGVDANLPP----KLDTDKHPEVKLPKD-RKVDSLCSSPIVF 920
            +L  ++E+  + A + +K    +++ P     + T    ++  P    + DS+ S+ +V 
Sbjct: 736  QLKDMAERLPVGAVRNSKSPPFSSISPTPLSDVSTVATEQICGPITFHESDSMGSNCVVI 795

Query: 921  SNKLKSV-----YGRELCHDNSSGSVEDSKVARTEPQQKGTKASKLEYAEQYEPGIYITF 975
            SN   +      Y R     +S   + +      EP Q       +E+ EQ EPG+YIT 
Sbjct: 796  SNGSSTSSNHSSYARV---GHSEAIIRNKNKTDAEPYQG------VEWVEQDEPGVYITL 846

Query: 976  TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
             +LP G K LKRVRFSR+RF+EK AE+WW  N+V VYQ+Y +
Sbjct: 847  VSLPGGVKDLKRVRFSRKRFSEKQAEQWWAANRVRVYQQYNV 888


>gi|413923469|gb|AFW63401.1| putative regulator of chromosome condensation (RCC1) family protein
            [Zea mays]
          Length = 502

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 199/526 (37%), Positives = 270/526 (51%), Gaps = 60/526 (11%)

Query: 528  VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            +VEG LK EFVK IS GS HVAVL   G V+TWGK   GQLGLGD  +R +PT VEAL D
Sbjct: 1    MVEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALED 60

Query: 588  RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTK 647
            +QV+S+VC S+ TAAIC+H  IS  DQS CS CR+ F F RKKHNCYNCG   C++CS+ 
Sbjct: 61   KQVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRLAFRFTRKKHNCYNCGSMVCNSCSSN 120

Query: 648  KIINASLTPNKGKPSRVCDTCYNHLQKITHSGRL-----LKQENQSPRNLLNLQGSLSEE 702
            K+  A+L P+K K  RVCD C+N L K    G++     +++E             LS  
Sbjct: 121  KVHRAALAPDKSKRCRVCDACFNELNKTAEHGKMSCGSKIQKEPSYLAETRTYTPKLSRM 180

Query: 703  VKEEKGALTPSRGQSFTSKQSRNVERKPGECLESASSLSSGLQRWGQVSCPIRFKTHCHE 762
            +K E   +    G S  S   RN         E A+      +RWGQV CP RFK  C  
Sbjct: 181  LK-EANFIMEKMGSSAQSPGQRN--------QEPATPNQMQKERWGQVECPDRFK--CAR 229

Query: 763  KSVEPTPIPKTQMSTHSPLLRKISLGS--NFIPIASTV-----EKDLSESNKMLNEEVQR 815
             ++     PK Q     P+ R     S     P+  T      E+DL E  K+L EEV++
Sbjct: 230  DNIPHRLTPKKQTIDDYPMRRMADPVSQKTAAPLTQTTSDRRKEQDLIE--KILLEEVKQ 287

Query: 816  LRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEK 875
            L+ Q   L ++C+  + KV+  ++K+EE W + R+EA KC+AA+EIIK L  + + LS K
Sbjct: 288  LQAQVTTLAEECRHRSLKVRLYKRKLEETWLIVRDEATKCEAAEEIIKVLTNQRNALSNK 347

Query: 876  ISAAKEAKEGVDANLPPKLDTDKHPEVKLPKDRKVDSLCSSPIVFSNKLKSVYGRELCHD 935
            +         +D      L+ D    V  P D+ + +  + P+       +    E+   
Sbjct: 348  L---------LDG-----LELDGSSIVPNPPDKALATCKTPPLNSIRDQHNAEAEEVLDT 393

Query: 936  NSSGSVEDSKVARTEPQQKGTKASKLEYA---------------------EQYEPGIYIT 974
             S+ S     V  +   Q G   +                          EQ E G+YIT
Sbjct: 394  RSTASSNTVAVDDSAAHQNGRSRASSSSRGYYDDGGTDSTAAPTDSNGVIEQIERGVYIT 453

Query: 975  FTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEEY 1020
              T PSG+KG+KR+RFSR+ F E  A++WWE N+  V+ KY   EY
Sbjct: 454  VVTSPSGKKGIKRIRFSRKHFGEAEAQKWWERNESRVFAKYDSVEY 499



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 42/72 (58%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V++IS G+ H A++   G+VF WG+G +G+LG    +D S P LVE L    V S+ C  
Sbjct: 11  VKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSS 70

Query: 324 FQTCALTKSGEI 335
             T A+   GEI
Sbjct: 71  NSTAAICVHGEI 82



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  ++CG  H A+++ +G++FT+G GT G LG G+  + S P  VE+L   +V S+ C  
Sbjct: 11  VKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSS 70

Query: 431 WHTAAI 436
             TAAI
Sbjct: 71  NSTAAI 76



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 11/90 (12%)

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           VK ++CG  H A +           A+ GK+FTWG   +G+LG  D   +  PT V  L 
Sbjct: 11  VKDISCGSSHVAVL-----------AMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALE 59

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           D       C    T  +   G++ +   +V
Sbjct: 60  DKQVDSIVCSSNSTAAICVHGEISSKDQSV 89


>gi|296086390|emb|CBI31979.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  289 bits (739), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 178/423 (42%), Positives = 246/423 (58%), Gaps = 47/423 (11%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIWYSG++EKQL+LN+V++II GQRT  FQ  P+P+++ QSFS+IY  G+RSLDLI
Sbjct: 46  DESMLIWYSGKEEKQLKLNNVSRIIPGQRTPIFQRYPRPEKEYQSFSLIY--GDRSLDLI 103

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
           CKDK +AE WF+GL+  IS     +  S +R+         SP S  RR        D  
Sbjct: 104 CKDKDEAEVWFIGLKGLISRGNYRKWRSEIRDD---SISSESPHSRARRISPSLSSSDPG 160

Query: 122 ELSQVRSLCGSPSLSLSERCFSDGLSY--SSDSFYSSESSSSQIQNLSNIITPSSPHM-- 177
           +  Q +    +   S   + FSD +SY  S+ SF  +ES +S + +LS+    +S     
Sbjct: 161 DTQQTQVTFENIPQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTS 220

Query: 178 ETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAV 237
            +ENF          R   + +    +   G    +  D L DV +WGEG+  G +G  V
Sbjct: 221 ASENF----------RVSLSSAVSSSSQGSGH---DDFDALGDVFMWGEGIGDGIMGAGV 267

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
               S + T++DALLPK LES V+LDV +I+ G KHA LVTK+GEVF WGE    RLGH 
Sbjct: 268 HRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHG 327

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
           V +DVS PKL++ L G+N++ V+CGE+ +CA+T SG++YTWG   H + L+G     SHW
Sbjct: 328 VEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHW 387

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           +P+K+                          QLFT+GDGTFG LGHG+  ++S P+EVE+
Sbjct: 388 IPKKV-------------------------SQLFTFGDGTFGALGHGDHSSMSIPREVEA 422

Query: 418 LRG 420
           LRG
Sbjct: 423 LRG 425



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 22/162 (13%)

Query: 333 GEIYTWGHN------NHGADLVGERRSR--SHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           G+++ WG          G   VG   S      LP+ L  T+  + V  +ACG  H  +V
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVV-LDVHSIACGGKHAVLV 307

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++F++G+     LGHG   +VS PK +++L G+ ++ VACG +H+ A+        
Sbjct: 308 TKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT------- 360

Query: 445 KSNAIGGKLFTWGDA--DKGRLGHVDGERKLLPTCVTRLVDF 484
               + G L+TWGD   + G LGH       +P  V++L  F
Sbjct: 361 ----LSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSQLFTF 398



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 81/211 (38%), Gaps = 47/211 (22%)

Query: 388 GQLFTYGDGTF-GVLGHGNLQNVSQ---------PKEVESLRGLKVKSVACGPWHTAAIV 437
           G +F +G+G   G++G G  +  S          PK +ES   L V S+ACG  H   + 
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                        G++F+WG+    RLGH        P  +  L   +    +CG   + 
Sbjct: 309 K-----------KGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSC 357

Query: 498 GLTGLGKVYTMGSAVH--GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
            +T  G +YT G   H  G LG+                       S  S+ +    S  
Sbjct: 358 AVTLSGDLYTWGDGTHNSGLLGHG----------------------SEASHWIPKKVS-- 393

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALR 586
            ++T+G    G LG GD      P  VEALR
Sbjct: 394 QLFTFGDGTFGALGHGDHSSMSIPREVEALR 424



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 11/116 (9%)

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGN--PKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           G  +  G+ G G V+ +GS+   ++    PKA + ++ +         V  I+ G  H  
Sbjct: 255 GEGIGDGIMGAG-VHRVGSSSSTKIDALLPKALESTVVLD--------VHSIACGGKHAV 305

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           ++T  G V++WG+    +LG G   +   P  ++AL    +E V CG   + A+ L
Sbjct: 306 LVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361


>gi|414590766|tpg|DAA41337.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 521

 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 213/400 (53%), Gaps = 57/400 (14%)

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +++V +  S+   GKLFTWGD DK RLGH D E KL PT             +CG  LTV
Sbjct: 24  EVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTI------------ACGHSLTV 71

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           GLT   +V +MG+ V+GQLGNP++                            VLT+   V
Sbjct: 72  GLTTSRQVLSMGNIVYGQLGNPRSN---------------------------VLTNKSEV 104

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
           +TWGK ANG+LG GD ++R+ PT VE+LRDR +  + CGS+ T+AIC HK +S  +QS  
Sbjct: 105 FTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWVSGAEQSQY 164

Query: 618 SQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITH 677
           + CR PFGF RK+HNC+NCGL  C+ C++ K++ A+L PN  KP RVCD+C+  L   T+
Sbjct: 165 ASCRQPFGFTRKRHNCHNCGLVHCNVCTSHKVLRAALAPNPAKPYRVCDSCFMKLNSATY 224

Query: 678 SGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSR---GQSFTSKQSRNVERKPGECL 734
           S  + K++   PR+     G  + + K  + A+ PS     +S  SK ++  ++      
Sbjct: 225 SSTINKKKEVVPRH----SGESNHDAKLAR-AIVPSNLDMIRSLDSKAAKQGKKTDALSF 279

Query: 735 ESASSLSSGLQ-RWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGSNFIP 793
                +SS LQ R   +S  I        ++V  +          SP  RK S   +  P
Sbjct: 280 LRTPQMSSLLQLRDITLSGVIDLNKSV-PRAVRTSVRSLNSSRVVSPFSRKPSPPRSTTP 338

Query: 794 --------IASTVEKDLSESNKMLNEEVQRLRDQARNLEK 825
                   IA T    L+++N+ML++EV+RLR Q+  ++K
Sbjct: 339 VPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQSEIVKK 378



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 42/156 (26%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G++F WG+G   RLGH        PKL          +++CG   T  LT S ++ + G+
Sbjct: 37  GKLFTWGDGDKHRLGHGDKE----PKLKP--------TIACGHSLTVGLTTSRQVLSMGN 84

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             +G   +G  RS                             +++   ++FT+G G  G 
Sbjct: 85  IVYGQ--LGNPRSN----------------------------VLTNKSEVFTWGKGANGR 114

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           LGHG++++   P  VESLR   ++ +ACG   T+AI
Sbjct: 115 LGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAI 150



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 255 LLESAVMLDVQNI---SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           L  S  +L + NI    LG   + ++T + EVF WG+G +GRLGH    D   P +VE L
Sbjct: 73  LTTSRQVLSMGNIVYGQLGNPRSNVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESL 132

Query: 312 SGINVQSVSCGEFQTCAL 329
               ++ ++CG   T A+
Sbjct: 133 RDRAIRHIACGSNFTSAI 150


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 232/468 (49%), Gaps = 44/468 (9%)

Query: 220 DVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           D+  WG   +GVLG             +  + + L P+++E+ +  D++ ++ G +H   
Sbjct: 374 DIYTWGASPKGVLG-------------HGEETEELFPRVVEALLGRDIRTVACGTEHTLA 420

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           V+  GE+F WG G+ G+LG K  +D   P  +     +N+  VSC E  + ++T+SGE+Y
Sbjct: 421 VSVNGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELY 480

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           T+G +  G  L      R   +PRK+ F T +  ++  V+CG   T  +++ G+L+++G 
Sbjct: 481 TFGRS--GPHLGYTTEDRKQAVPRKVDFSTAN--KIKAVSCGLEFTIALNSEGELYSFGK 536

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              G LG G+  ++ +P  ++ L G+++  V+CG  H  A+            + G ++ 
Sbjct: 537 NDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAV-----------TVNGDVWL 585

Query: 456 WGDADKGRLGHVDGERKLLP-TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
           WG  + G+LG    E   +P    +   + +     CG   TV L+  G VY  G+   G
Sbjct: 586 WGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSG 645

Query: 515 QLG------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           QLG      +P   +  I  +    K   +  +  G  H A +T  G +YTWG  + G+L
Sbjct: 646 QLGVAVNQTSPYITNPCILSMPNNTK---IAKVDCGIEHTAAVTESGCLYTWGNGSRGRL 702

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRR 628
           G GD Q+R  PT VE+L  +QV+S+ CG+  TAA  +   +   +  SC  C+  F   R
Sbjct: 703 GHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVIRAWVHDQETKSCMACKQRFTTVR 762

Query: 629 KKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT 676
           ++H+C  CG  FC  CS +K     L     +P RVCD CY  L + T
Sbjct: 763 RRHHCRKCGGIFCGTCSQRKC--PLLEIGYSEPVRVCDRCYFILTEST 808



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           V+V      +YTWG +  G LG G+  E   P  VEAL  R + +V CG+  T A+
Sbjct: 366 VSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAV 421



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 29/37 (78%), Gaps = 2/37 (5%)

Query: 46  SFSIIY--ANGERSLDLICKDKVQAESWFLGLRAAIS 80
           SFS+IY   N +RSLD++CKD+V+ + W +GL+A I+
Sbjct: 296 SFSVIYKQGNTKRSLDIVCKDRVEYDIWTVGLQALIN 332


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  212 bits (540), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 136/365 (37%), Positives = 189/365 (51%), Gaps = 27/365 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G  G    G  D S     T VDAL          + VQ I+ G+ H  ++T +
Sbjct: 2   VFTWGRGEDGQL--GLGDTSDQDEPTYVDALRG--------VGVQQIACGSGHTVVLTTD 51

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEVF WG G DGRLGH  N     P++ + L+G  V  V+CG + T A+T +G++YTWG 
Sbjct: 52  GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGG 111

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             +G   +G      H  P+++ + L G  V+++ACG  HTAIV+ SG L+T+GD   GV
Sbjct: 112 GMYGK--LGHGDEAGHATPKRV-EALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168

Query: 401 LGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            GHG  +     P+ +ES+   +V  ++   +HTA + D            G+LFTWG+ 
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTD-----------AGELFTWGEG 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-N 518
             GRLGH+       PT V  +V     Q SCG   T  ++  G++YT G   HGQLG N
Sbjct: 218 KFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHN 277

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
            +    + T VE  L   FV  I+ G  H   LT  G VYTWG   +G+LG G+ ++   
Sbjct: 278 DRVNKMTPTFVEA-LDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAV 336

Query: 579 PTFVE 583
           P  VE
Sbjct: 337 PQAVE 341



 Score =  192 bits (488), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 115/323 (35%), Positives = 173/323 (53%), Gaps = 17/323 (5%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           VF WG G+DG+LG     D   P  V+ L G+ VQ ++CG   T  LT  GE++TWG  +
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G   +   ++PR +  +L G  V +V CG +HTA V+ +G L+T+G G +G LG
Sbjct: 62  DGR--LGHGDNGWKYVPR-MTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           HG+    + PK VE+L G  V  +ACG  HTA +              G L+TWGD + G
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIVT-----------ASGALYTWGDKENG 167

Query: 463 RLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
             GH + E  + LP  +  +      Q S     T  +T  G+++T G    G+LG+   
Sbjct: 168 VAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSE 227

Query: 522 KD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
           ++  S T+V+  + ++  + +S G +H AV++  G +YT+G   +GQLG  D   + TPT
Sbjct: 228 RNCHSPTIVDYMVGKK-PRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPT 286

Query: 581 FVEALRDRQVESVVCGSSITAAI 603
           FVEAL    V  + CG S + A+
Sbjct: 287 FVEALDGMFVSQITCGWSHSVAL 309



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 35/48 (72%)

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +V+TWG+  +GQLGLGD+ +++ PT+V+ALR   V+ + CGS  T  +
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVL 48


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 227/469 (48%), Gaps = 35/469 (7%)

Query: 212 IERKDILKD----VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNI 267
           I+ K +LKD    + +WG    GGD G         +K      LP ++ES +  +V  I
Sbjct: 151 IKTKVLLKDNSCDLYLWG----GGDRGRL------GHKDDKPRFLPNVVESLLGQNVTMI 200

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LSGINVQSVSCGEFQT 326
           + G  H   +  +G+VF WG G  G LGH    D   P +++  L  +NV  V+C E  +
Sbjct: 201 ACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHS 260

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             +++ G +YTWG    G  L     S +     +L D L G R+ +VACG  HT ++  
Sbjct: 261 AVISEDGNLYTWG--KAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDE 318

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+++++G   FG LG G+ + +++P  V +L  + +  V+CG  H+AAI +        
Sbjct: 319 EGRVYSFGINKFGELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDE-------- 368

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G LF WG   +G+LG  + +    PT V    D      SCG   T  +T  G  Y
Sbjct: 369 ---DGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAY 425

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG--ISSGSYHVAVLTSGGSVYTWGKNA 564
             G     Q G P +    ++   G +    ++   I+ G+    ++TS G ++TWG N 
Sbjct: 426 CWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNM 485

Query: 565 NGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
           +GQLG G++++  + P  VE+L +++V+ V CG      +  H  +   +  SC  C+  
Sbjct: 486 SGQLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWVPDEEVKSCMACKKS 545

Query: 624 FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHL 672
           F   R++H+C  CG  FC +CSTK+     L      P RVCD CY  L
Sbjct: 546 FTAIRRRHHCRQCGGIFCGSCSTKRY--PLLDKGHADPVRVCDKCYVSL 592



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 163/333 (48%), Gaps = 25/333 (7%)

Query: 299 NMDVSCPKLVECLSGINVQS---VSCGEFQTCALTK--SGEIYTWGHNNHGADLVGERRS 353
           N +    KLVE    I  +    V  G  +T  L K  S ++Y WG  + G   +G +  
Sbjct: 123 NKEAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGR--LGHKDD 180

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
           +  +LP  + ++L G  V+ +ACG  HT  +++ GQ+F++G G  G LGHGNL++   P 
Sbjct: 181 KPRFLP-NVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPL 239

Query: 414 EVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-- 470
            ++  LR + V  VAC   H+A I +            G L+TWG A    LG++D    
Sbjct: 240 MIDGPLRDVNVVHVACYENHSAVISE-----------DGNLYTWGKAGP-FLGYMDDSVT 287

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
           ++  P  V  L     VQ +CGR  T+ +   G+VY+ G    G+LG  +  D++IT   
Sbjct: 288 KQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELG--QGHDKAITKPT 345

Query: 531 GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
                  +  +S G +H A +   G ++ WG  A GQLG G+ +   +PT V    D+ +
Sbjct: 346 MVPNLVSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPL 405

Query: 591 ESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
           E V CG   TAAI  +        ++ SQC +P
Sbjct: 406 EDVSCGYGHTAAITANGVAYCWGDNASSQCGVP 438



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 36/279 (12%)

Query: 178 ETENFMKWE-----LNYADTRCPKNESHRLVTPTYGSPLIE----RKDIL---KDVMIWG 225
           E  N   W      L Y D    K    RLV   YG+ +++    R   L   ++  ++ 
Sbjct: 265 EDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYS 324

Query: 226 EGV-LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            G+   G++G   D ++++       ++P L+       +  +S G  H+A + ++G +F
Sbjct: 325 FGINKFGELGQGHDKAITK-----PTMVPNLVS------ICKVSCGRHHSAAIDEDGVLF 373

Query: 285 CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
            WG G  G+LG      +  P  V   +   ++ VSCG   T A+T +G  Y WG N   
Sbjct: 374 MWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASS 433

Query: 345 -----ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
                + + GE  S     PR +     G+R +++ CG   T +V++ GQLFT+G    G
Sbjct: 434 QCGVPSSVYGELSS-----PRGIV-LPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSG 487

Query: 400 VLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            LG+G   +  SQP  VESL   +VK VACG  H   +V
Sbjct: 488 QLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHIGCLV 526



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)

Query: 2   DEKFLIWYSGQK-EKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDL 60
           D   L+W S +K +  + ++ +T+I  GQ T  F   P P  +  SFS++Y+  +RSLD+
Sbjct: 41  DLSRLMWESAKKMDAAVLISQITEIKTGQVTPVFLKNPIPQCEAVSFSLLYS--DRSLDI 98

Query: 61  ICKDKVQAESWFLGLRAAI 79
           +CKDK + ++W   L+A I
Sbjct: 99  VCKDKKEFDTWTTALKALI 117


>gi|115447969|ref|NP_001047764.1| Os02g0684900 [Oryza sativa Japonica Group]
 gi|113537295|dbj|BAF09678.1| Os02g0684900, partial [Oryza sativa Japonica Group]
          Length = 431

 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 228/456 (50%), Gaps = 71/456 (15%)

Query: 606  HKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVC 665
            H+ +S  DQS CS C++ FGF RKKHNCYNCG  FC++CS  K+  A+L P++ K  RVC
Sbjct: 1    HRPLSSKDQSVCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVC 60

Query: 666  DTCYNHLQKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRN 725
            D C++ +QK+    +L  Q+                  K +K  + P   +S+T K +R 
Sbjct: 61   DACFSQMQKVEEHRKLDPQQ------------------KIQKDEVCPIEIRSYTPKLAR- 101

Query: 726  VERKPGECLESASSLSSGLQ--------------RWGQVSCPIRFKTHCHEKSVEPTPIP 771
            + ++    +E  +S  S  Q              RWG V CP +F+  C  +S+ P    
Sbjct: 102  IFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLVECPSQFR--CVRESI-PYCST 158

Query: 772  KTQMSTHSPLLRKIS------LGSNFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEK 825
              + +    ++R ++        S+ +  A+  + +L     +L EEV++L++Q   L K
Sbjct: 159  LNKQTVSGSIVRVMNETMAPKPASSLLKSANDSKAELDLMENILLEEVKQLQEQVTTLAK 218

Query: 826  QCQIGNQKVQECQQKIEEAWSLAREEAEKCKAAKEIIKALAVRLHTLSEKISAAKE---- 881
            QC+  + KVQ  ++K+EE W +A++EA KCKAAK+IIK L  +   LS+ + A ++    
Sbjct: 219  QCRQRSLKVQLYKRKVEETWLIAKDEAAKCKAAKDIIKVLIDQHDFLSKNLLAGEKLDNS 278

Query: 882  --------AKEGVDANLPPKLD----TDKHPEVKLPKD----RKVDSLCSSPIVFSNKLK 925
                    + + + A LP   D    T +  + K  +D    R+VD  C+ P + S    
Sbjct: 279  RIMPSHIASAKSLKAELPDPPDKNVFTSEFQQSKSNRDHHNSRQVDRECTQPSIASMANY 338

Query: 926  SVYGRELCHDNSSGSVE--DSKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQK 983
            SV  +  C   S+GS    +   A T P             EQ E G+Y T  T P G+K
Sbjct: 339  SVTHQN-CRRTSNGSTRCTEGTDATTAPTDSNG------VIEQIERGVYATVVTSPGGKK 391

Query: 984  GLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGIEE 1019
             +KR+RFSR+ F E  A++WWE N+ +++ KY   E
Sbjct: 392  CIKRIRFSRKHFGEDQAQKWWEANESMIFGKYSSME 427


>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 1375

 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/471 (30%), Positives = 219/471 (46%), Gaps = 84/471 (17%)

Query: 203 VTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVML 262
           VT   G P+ E++    D  +WG    G        GS+   +    +  P ++E +  L
Sbjct: 235 VTGAMGLPVPEQRP--GDCYVWGSSDAGIP---PAQGSICDRQ---QSATPAIVEDSTHL 286

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           DV  +++G +HAALVT+ GEV+ WG G  G+LG     D   P+ V+ L G  ++S+  G
Sbjct: 287 DVCQVAVGLRHAALVTRSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAG 346

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
                 +++ G +YTWG    G   +G   +   ++PR++  TL    +++V+CG +H+A
Sbjct: 347 ----AVVSEEGFLYTWGDGAAGN--LGYSNALRQFIPRRVEGTLLDHTITQVSCGPYHSA 400

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S++G LFT+GDG  G LGHG L +  +P++V++L+  +V  VACG WHTAAI    + 
Sbjct: 401 ALSSTGALFTWGDGLCGKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTAAIAAGPIG 460

Query: 443 -------------------RCKSNAI-------GGKLFTWG------------------- 457
                              R K +A        GG LFTWG                   
Sbjct: 461 GSSLPSSLSELSFQEAEALRHKLSAAYSMLDEEGGALFTWGGHFTWVDHRKNSAGHPVDK 520

Query: 458 -DADKGRLGHVDGERKLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            D  +G LGH D    L PT V   L      Q  CG  LTV LT  G+++ MG     +
Sbjct: 521 RDHHRGCLGHGDTAGCLAPTRVGGALQGLAVRQVECGLNLTVALTADGRIWQMG-----E 575

Query: 516 LGNPKAK----DRSITVVEGKLKEEFVKGISSGSYHVAVLTSG--------------GSV 557
            G P  K    + +   V+  + + +V+ I+ G  H A L                   +
Sbjct: 576 TGAPGHKLAPWEGAREAVQVPIPDHYVERIAVGMQHAAALAGPLDGQTGRAEEGAECSVI 635

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           +TWG+   GQLG+G   +   P  V+ LR R V  V CG   T A+C H +
Sbjct: 636 FTWGRGREGQLGVGMHADSAIPAPVDELRGRHVLQVACGGCHTLAVCRHDA 686



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 930  RELCHDNSSG---SVEDSKVARTEPQQKGTKASKLEYAEQYEP--GIYITFTTLPSGQKG 984
            ++L  +NSSG          A   P  +G  A K       EP  G+++T    P GQ  
Sbjct: 1261 QQLKSENSSGMEGGFGPPAAACAVPSAEGDDAPKTGLEHTVEPSEGVFLTLQATPLGQNA 1320

Query: 985  LKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            L R+RF+R RF++  AE WW  ++  V ++Y +
Sbjct: 1321 LTRIRFARGRFSKAQAEAWWRAHKAEVAERYNL 1353



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 3   EKFLIWYSGQ-KEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYAN---GERSL 58
           +  L W S   K + + L SV ++I GQ T  F+  P P     SFS++Y +     R+L
Sbjct: 100 DSVLTWRSANGKPRSIPLASVKQVIKGQLTEIFKRHPLPHMAHASFSLMYIDLDLSSRTL 159

Query: 59  DLICKDKVQAESWFLGLRA 77
           DL C+++ + + W+ G++A
Sbjct: 160 DLTCRNQQEFDLWYWGIQA 178


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG +    T  D   P  +++     +  I+ G+ H  ++T EGEV+ WG G DGRLGH 
Sbjct: 11  DGQLGLGDTS-DQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHG 69

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
            N     P+LVE L G N++ V+CG + T A+T SG++YTWG   +G   +G      H 
Sbjct: 70  DNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGK--LGHGNETGHS 127

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVE 416
            P  L +TL G++V +VACG  HT ++  +  ++T+GD   GV GHG+ +     P  VE
Sbjct: 128 TPF-LVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVE 186

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            LRG  +  ++   +HTAA+ +            G++FT+G+   GRLGH     + +  
Sbjct: 187 ELRGKNIVQISACGFHTAALSEF-----------GEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L      Q +CG   T  +T  G+VYT G   HGQLG+    ++++      L E+
Sbjct: 236 FVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEK 295

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  I+ G  H   LT  G VYTWG   +G+LG  D+ +   P  V+ L  ++V SV   
Sbjct: 296 LVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASY 355

Query: 597 SSITAAIC 604
           +  T A+ 
Sbjct: 356 NEHTVALV 363



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 12/220 (5%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           KDV  WG+           +G      T+    LP  +E     ++  IS    H A ++
Sbjct: 157 KDVYTWGD---------KENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALS 207

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           + GEVF +GEGK GRLGH    +    + VE L+G  V+ V+CG F T A+T++GE+YTW
Sbjct: 208 EFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTW 267

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G   HG    G++ +++  +P ++ ++L    V ++ CG  HT  ++ +G+++T+G+G  
Sbjct: 268 GGGEHGQLGHGDKVNKT--VPTRV-ESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDH 324

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           G LGH +   V+ PK V+ L G +V SVA    HT A+VD
Sbjct: 325 GKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 83/157 (52%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +++WG  + G+LG  D   +  P  +  L +   VQ +CG   TV LT  G+VYT G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            G+LG+     + +  +  +L+ + ++ ++ GSYH A +T  G +YTWG    G+LG G+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
                TP  VE L+  QV  V CGS  T  +  +K +
Sbjct: 123 ETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDV 159



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 33/48 (68%)

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +VY+WG+  +GQLGLGD+ ++  P  ++AL +R++  + CGS  T  +
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVL 49


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 190/368 (51%), Gaps = 16/368 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG +    T  D   P  +++     +  I+ G+ H  ++T+EGEV+ WG G DGRLGH 
Sbjct: 11  DGQLGLGDTS-DQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHG 69

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
            N     P+LVE L G N++ V+CG + T A+T SG++YTWG   +G   +G      H 
Sbjct: 70  DNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGK--LGHGNETGHS 127

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVE 416
            P  L +TL  ++V +VACG  HT ++  +  ++T+GD   GV GHG+ +     P  VE
Sbjct: 128 TP-YLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVE 186

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            LRG  +  ++   +HTAA+ +            G++FT+G+   GRLGH     + +  
Sbjct: 187 ELRGKSIVQISACGFHTAALSEF-----------GEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L      Q +CG   T  +T  G+VYT G   HGQLG+    ++++      L E+
Sbjct: 236 FVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEK 295

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  I+ G  H   LT  G VYTWG   +G+LG  D+ +   P  V+ L  ++V SV   
Sbjct: 296 LVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASY 355

Query: 597 SSITAAIC 604
           +  T A+ 
Sbjct: 356 NEHTVALV 363



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 12/220 (5%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           KDV  WG+           +G      T+    LP  +E      +  IS    H A ++
Sbjct: 157 KDVYTWGD---------KENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALS 207

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           + GEVF +GEGK GRLGH    +    + V+ L+G  V+ V+CG F T A+T++GE+YTW
Sbjct: 208 EFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTW 267

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G   HG    G++ +++  +P ++   L+ + V ++ CG  HT  ++ +G+++T+G+G  
Sbjct: 268 GGGEHGQLGHGDKVNKT--VPTRVESLLEKL-VLQITCGWSHTVTLTDTGEVYTWGNGDH 324

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           G LGH +   V+ PK V+ L G +V SVA    HT A+VD
Sbjct: 325 GKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVD 364



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 83/157 (52%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +++WG  + G+LG  D   +  P  +  L +   VQ +CG   TV LT  G+VYT G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            G+LG+     + +  +  +L+ + ++ ++ GSYH A +T  G +YTWG    G+LG G+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
                TP  VE L+  QV  V CGS  T  +  +K +
Sbjct: 123 ETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDV 159



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 33/48 (68%)

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +VY+WG+  +GQLGLGD+ ++  P  ++AL +R++  + CGS  T  +
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVL 49


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 225/484 (46%), Gaps = 32/484 (6%)

Query: 195 PKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK 254
           P+ +    V    GS  +  ++   DV  WGEG  G    G  D   S          P+
Sbjct: 135 PETDQKLQVVIDKGSTRVLIREDASDVYTWGEGTRGMLGHGEEDPEAS----------PR 184

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           ++E+ +  D++ + LG+ H   +   GEV+ WG G  GRLG     D   P  +  L G 
Sbjct: 185 VVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGF 244

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           ++  ++C E  + A+  +GE Y WG    G+  V       H  P ++   LDG RV   
Sbjct: 245 DITHIACNENHSVAVADNGEAYVWGRGIDGSLGV---EGDKHVSPTQIH-ALDGKRVVHA 300

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           ACG   T  V  SG+++  G+   G LG G+ + +S+P  V +L   ++  +ACG  H  
Sbjct: 301 ACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAV 359

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG-ERKLLPTCV-TRLVDFDFVQASCG 492
           A+ +            G+L+ WG    G+LG  +  E +L P  V + +V  D    +CG
Sbjct: 360 ALSET-----------GRLYAWGAHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACG 408

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLG-NPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
              T+ L+  G +Y  GS   GQLG  P A K+++        +      IS G    A 
Sbjct: 409 GNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAA 468

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
           ++  G +YTWG  A+  LGL D + +  PT +E++ D++  +V CG    AA  +H  + 
Sbjct: 469 VSDRGKIYTWGSGASNALGLPDGRTKYAPTLIESMADKRCRTVACGFFHMAATIIHGWVP 528

Query: 611 VGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYN 670
             + + C  C++ F   R++H+C  CG  FC  CS KK     L     +  RVCD CY 
Sbjct: 529 DDEATQCMACKLKFTTIRRRHHCRKCGGIFCGNCSAKKF--PLLEAGFSESVRVCDKCYV 586

Query: 671 HLQK 674
            L +
Sbjct: 587 ILSR 590



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 220/529 (41%), Gaps = 99/529 (18%)

Query: 6   LIWYSGQK---EKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLIC 62
           L W S +K   E  + +  +++++ GQ+T  FQ    P+ +++SFSI+Y  G R+LD+IC
Sbjct: 43  LQWESPKKNLGESSVLVAEISEVLKGQQTRVFQSNRMPEFEERSFSIVY-QGNRTLDIIC 101

Query: 63  KDKVQAESWFLGLRAAISSCRRSRTFSCLR--------------EKRGVQSCVSSPASYI 108
           KD+ + + W  GL+A ++        S LR              +K   +  +   AS +
Sbjct: 102 KDRREHDVWISGLQALVNRATGDIDLSQLRATAPETDQKLQVVIDKGSTRVLIREDASDV 161

Query: 109 R-----RKHNLGLLEDATELSQ--VRSLCGSPSLSLSERCFSDGLSYS---SDSFYSSES 158
                  +  LG  E+  E S   V +L G     +   C   G + +   S   YS   
Sbjct: 162 YTWGEGTRGMLGHGEEDPEASPRVVEALLGH---DIKMLCLGSGHTMALAVSGEVYSWGL 218

Query: 159 SSSQIQNLSNIITPSSPHMETENFMKWEL----NYADTRCPKNESHRLVTPTYGSPLIER 214
                              E + F    L     +  T    NE+H +     G      
Sbjct: 219 GLGGRLGQG---------RERDRFTPLRLAGLRGFDITHIACNENHSVAVADNG------ 263

Query: 215 KDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA 274
                +  +WG G+  G +G  V+G    + TQ+ AL  K         V + + GA   
Sbjct: 264 -----EAYVWGRGI-DGSLG--VEGDKHVSPTQIHALDGK--------RVVHAACGAAFT 307

Query: 275 ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
             V + GEV+  G  + G+LG   N  +S P LV  L    +  ++CG     AL+++G 
Sbjct: 308 LFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSETGR 366

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR---------VSKVACGEWHTAIVS 385
           +Y WG ++ G   VGE           L D L  VR         V+  ACG  HT I+S
Sbjct: 367 LYAWGAHSSGQLGVGE----------PLEDRLSPVRVESNVVRDDVADFACGGNHTIILS 416

Query: 386 TSGQLFTYGDGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            SG L+ +G G  G LG G L  +N + P  + +  G K  +++CG   +AA+ D     
Sbjct: 417 NSGLLYAFGSGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDR---- 472

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                  GK++TWG      LG  DG  K  PT +  + D      +CG
Sbjct: 473 -------GKIYTWGSGASNALGLPDGRTKYAPTLIESMADKRCRTVACG 514


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/421 (33%), Positives = 209/421 (49%), Gaps = 31/421 (7%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   + +V  PKL+  L
Sbjct: 3282 LPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFL 3341

Query: 312  SGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++  +V  G     ALT+ G+I++WG    G   +G   S S   PR L ++L   
Sbjct: 3342 SQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGK--LGHGNSVSLDKPR-LIESLKSK 3398

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+SL G +V  VACG
Sbjct: 3399 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACG 3458

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  + RL     VQ 
Sbjct: 3459 S-RDAQTMALTAD--------GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQI 3509

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + V  ++ G+ H 
Sbjct: 3510 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKVVHVAVGALHC 3568

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +   + P+ V  L D +V  V CGSS + A  L   
Sbjct: 3569 LAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3628

Query: 609  ISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN--ASLTPNKGKPSRVCD 666
             +  +Q        P  F  +K       L F      K I+N     T + G P   C 
Sbjct: 3629 PATNNQE-------PVMFPTEKDPLGQISLTF------KSIVNHGTDTTDSNGCPVPSCS 3675

Query: 667  T 667
            T
Sbjct: 3676 T 3676



 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 198/412 (48%), Gaps = 47/412 (11%)

Query: 229  LGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            L  D  GA+ G    ++ Q+  L      LP L ES   L    ++ G +    VT +G+
Sbjct: 4286 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGK 4345

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGH 340
            V+  G G  GRLG      V  P L+E +  + V+  +V+ G     AL+  G +Y+WG 
Sbjct: 4346 VYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4405

Query: 341  NN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
             +     HG  L+ +R         KL + L G  +  +ACG  H+A ++++G L+T+G 
Sbjct: 4406 GDDGKLGHGNRLMYDRP--------KLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4457

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G LGHG+ ++   PK VE+L+  KV  VACG      +       C ++     +++
Sbjct: 4458 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWS 4508

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD D G+LG    +   +P  +  L     ++  CG   +V LT  G +YT G   + +
Sbjct: 4509 WGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHR 4568

Query: 516  LGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            LG+       + R +  ++GK     +  I++GS H    T  G V+TWG N  GQLG G
Sbjct: 4569 LGHGTDDHVRRPRKVAALQGKK----IISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4624

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
             +   + P  V AL+ +++  V CGS+ T A    K+         +Q RMP
Sbjct: 4625 TTSALQRPRLVHALQGKKITRVACGSAHTLAWSTMKA---------TQSRMP 4667



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 162/325 (49%), Gaps = 24/325 (7%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +G   D +V + K     L+P L  S  M+    +  G KHA  +T++G++F
Sbjct: 3317 GEGT-NGRLGLGDDSNVCEPK-----LIPFL--SQYMIKKMAVHSGGKHALALTQDGKIF 3368

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGEG+DG+LGH  ++ +  P+L+E L    ++ ++CG   + A+T SGE+YTWG   +G
Sbjct: 3369 SWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 3428

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLG 402
               +G   + +   P KL  +L G RV +VACG  +  T  ++  G ++++GDG FG LG
Sbjct: 3429 R--LGHGDTATQMKP-KLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG 3485

Query: 403  HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
             G       P  ++ L GL V  + CG   + A+              G+++TWG  D  
Sbjct: 3486 RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY-----------GEVWTWGKGDYF 3534

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
            RLGH +      PT V  L     V  + G +  + +T  G+VY  G   HGQ GN    
Sbjct: 3535 RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3594

Query: 523  DRSITVVEGKLKEEFVKGISSGSYH 547
                  +  +L +  V  +S GS H
Sbjct: 3595 VNKKPSLVHELDDARVNRVSCGSSH 3619



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 137/278 (49%), Gaps = 14/278 (5%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVST 386
           ALT+   +Y+WG+ + G    G+R     W    KL + L    ++ +ACG  ++A++S+
Sbjct: 519 ALTQDSSVYSWGNGDGGRLGHGDRV----WYDEPKLVEALVDKNITFIACGSTYSAVLSS 574

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           +G+L+T+G G +G LGHGN  NV  P  V +L G  V  VACG   +  +       C +
Sbjct: 575 NGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTL-------CVT 627

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +  G +F+WGD + G+LG    +    P  V +L+D +  +  CG   +  LT  G+VY
Sbjct: 628 AS--GIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVY 685

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           T G     +LG+   +      V   L  + VK +  G++HV  LT    VY WG+N  G
Sbjct: 686 TWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYG 745

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           Q+          PT    L  + +  + CG + + A C
Sbjct: 746 QIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWC 783



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 16/246 (6%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H   +T++  V+ WG G  GRLGH   +    PKLVE L   N+  ++CG   +  L+ +
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 575

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQL 390
           GE+YTWG  N+G   +G   S +  +P  L   L+G  V  VAC  G+  T  V+ SG +
Sbjct: 576 GELYTWGRGNYGR--LGHGNSDNVLIP-TLVTALNGHMVVHVACGSGDSQTLCVTASGIV 632

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           F++GDG +G LG G       PK V+ L  + V  V CG   +AA+              
Sbjct: 633 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY----------- 681

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+++TWG  +  RLGH + E    P  +  L      +   G    + LT    VY  G 
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGR 741

Query: 511 AVHGQL 516
             +GQ+
Sbjct: 742 NDYGQI 747



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +++WG+ D GRLGH D      P  V  LVD +    +CG   +  L+  G++YT G   
Sbjct: 526 VYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGN 585

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           +G+LG+  + +  I  +   L    V  ++  SG      +T+ G V++WG    G+LG 
Sbjct: 586 YGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 645

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G     +TP  V+ L D  V  V CG   +AA+  +  +
Sbjct: 646 GGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEV 684



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DGS +          PK+++  + ++V  +  G + +A +T  
Sbjct: 632 VFSWGDGNYGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYCGGQFSAALTAY 681

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+ WG+G+  RLGH     +  PK++E L    V+ +  G F   ALT+   +Y WG 
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGR 741

Query: 341 NNHG 344
           N++G
Sbjct: 742 NDYG 745



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 2/153 (1%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     +  + G      ++  GK+Y  G   
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3320

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG     +     +   L +  +K   + SG  H   LT  G +++WG+  +G+LG 
Sbjct: 3321 NGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGH 3380

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+S   + P  +E+L+ +++  + CGS  +AAI
Sbjct: 3381 GNSVSLDKPRLIESLKSKRIRDIACGSGHSAAI 3413



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 73/168 (43%), Gaps = 22/168 (13%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG----ISSGSYHVAVLT 552
           + LT    VY+ G+   G+LG+    DR +   E KL E  V      I+ GS + AVL+
Sbjct: 518 LALTQDSSVYSWGNGDGGRLGH---GDR-VWYDEPKLVEALVDKNITFIACGSTYSAVLS 573

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
           S G +YTWG+   G+LG G+S     PT V AL    V  V CGS  +  +C+  S  V 
Sbjct: 574 SNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIV- 632

Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
                        F     N    G   C    T KI++  L  N  K
Sbjct: 633 -------------FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAK 667



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           S G++++A LT   SVY+WG    G+LG GD    + P  VEAL D+ +  + CGS+ +A
Sbjct: 512 SDGTHYLA-LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSA 570

Query: 602 AI 603
            +
Sbjct: 571 VL 572


>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 783

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 202/402 (50%), Gaps = 40/402 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P++LE    LDV  I++GA+H    T+ G V+ WGEG  G+LG     D   P  VE L 
Sbjct: 65  PRVLEGTDTLDVVEIAIGARHGLARTRAGAVYSWGEGAGGKLGLPSAQDAEMPTRVE-LD 123

Query: 313 GINVQSVSCGEFQTCALTKS---------GEIYTWGHNNHGADLVGERRSRS-HWLPRKL 362
           G  V +++CG   + A+ +          G+   WG  N    L+G   +R+  + P K+
Sbjct: 124 GRAV-TLACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKI 182

Query: 363 FDTLD------GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
              +D      GV+V +V+CG  HTA V+ +G  FT+G+G+F  LGHG+ +    P+E+E
Sbjct: 183 SFAMDSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRAPRELE 242

Query: 417 SLR--GLKVKSVACGPWHTAAI----------VDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           + R     V  VACG WHTAAI          V ++ D  + + + G+LFTWGD + G+L
Sbjct: 243 TFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQL 302

Query: 465 GHVDGERKLLPTCVTRLV---DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G    E   +PT  +  +     +    SCG+  TV LT  G V+  G    G++ N   
Sbjct: 303 GIRGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAGCV--GKVDN-SL 359

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPT 580
           + +  T +    +   V  + SG  HV   T  G V++WG   NG+LG G + +++  P 
Sbjct: 360 RVKVFTRLP-NFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDRDKAAPE 418

Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRM 622
            +E+LR R V  + CG   T++ C+ K   +  +   S  R+
Sbjct: 419 EIESLRGRTVLRIACGP--TSSACVLKPARMTTKQKASMVRL 458



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 25/95 (26%)

Query: 944  SKVARTEPQQKGTKASKL------------------------EYAEQYEPGIYITFTTLP 979
            SKV R  P Q  +KA++                         E+ ++ E G+++T  T  
Sbjct: 681  SKVVRNAPPQSPSKATRTVIANVGRSAMRRADCASIPIGEAREWIDEVENGVFMTLRTH- 739

Query: 980  SGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQK 1014
              +  LKRVRFS+R F+ + A++WWEEN+  V ++
Sbjct: 740  GDRTILKRVRFSKRIFSNELAKQWWEENKERVIRE 774


>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  189 bits (480), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 79/158 (50%), Positives = 120/158 (75%), Gaps = 2/158 (1%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           F WGE  +GRLGH V+ +V  PKL++ L   N++ V+CGE+ +CA++ SG++YTWG  + 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G  ++G     SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGH
Sbjct: 61  G--ILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           G+ ++V  P+EV+SL+GL+    ACG WHTAA+V++MV
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 156



 Score =  107 bits (266), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 15/158 (9%)

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           ++WG  + G    G   +  H    KL D L    +  VACGE+H+  VS SG L+T+G 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQH---PKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 396 GTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G FG+LGHGN  +   PK V  L  G+ V S+ACGP+HTA +              G+LF
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTS-----------AGQLF 106

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T+GD   G LGH D +   +P  V  L     V+A+CG
Sbjct: 107 TFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 144



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 14/162 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE    G +G  VD +V           PKL+++    +++ ++ G  H+  V+  G++
Sbjct: 3   WGEES-EGRLGHGVDSNVQH---------PKLIDALGTTNIELVACGEYHSCAVSLSGDL 52

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           + WG+G  G LGH   +    PK V  L  GI+V S++CG + T  +T +G+++T+G   
Sbjct: 53  YTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 112

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            G    G+R+S   ++PR++ D+L G+R  + ACG WHTA V
Sbjct: 113 FGVLGHGDRKSV--FIPREV-DSLKGLRTVRAACGVWHTAAV 151



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 1/151 (0%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F+WG+  +GRLGH        P  +  L   +    +CG   +  ++  G +YT G    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           G LG+       +      L E   V  I+ G YH AV+TS G ++T+G    G LG GD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +    P  V++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 17/116 (14%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK----LLESAVMLDVQNISLGAKHAA 275
           D+  WG+G  G          +  +  +V   +PK    L+E    + V +I+ G  H A
Sbjct: 51  DLYTWGKGDFG----------ILGHGNEVSHWVPKRVNFLMEG---IHVSSIACGPYHTA 97

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +VT  G++F +G+G  G LGH     V  P+ V+ L G+     +CG + T A+ +
Sbjct: 98  VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 153


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 190/357 (53%), Gaps = 16/357 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   + +V  PKL+  L
Sbjct: 3277 LPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFL 3336

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G+I++WG    G   +G   S S   PR L ++L   
Sbjct: 3337 SQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK--LGHGNSVSLDKPR-LIESLKSK 3393

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+SL G +V  VACG
Sbjct: 3394 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACG 3453

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  + RL     VQ 
Sbjct: 3454 S-RDAQTMALTAD--------GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQI 3504

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + V  ++ G+ H 
Sbjct: 3505 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKVVHVAVGALHC 3563

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
              +T  G VY WG N +GQ G G +   + P+ V  L D +V  V CGSS + A  L
Sbjct: 3564 LAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVL 3620



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 198/412 (48%), Gaps = 47/412 (11%)

Query: 229  LGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            L  D  GA+ G    ++ Q+  L      LP L ES   L    ++ G +    VT +G+
Sbjct: 4253 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGK 4312

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGH 340
            V+  G G  GRLG      V  P L+E +  + V+  +V+ G     AL+  G +Y+WG 
Sbjct: 4313 VYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4372

Query: 341  NN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
             +     HG  L+ +R         KL + L G  +  +ACG  H+A ++++G L+T+G 
Sbjct: 4373 GDDGKLGHGNRLMYDRP--------KLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4424

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G LGHG+ ++   PK VE+L+  KV  VACG      +       C ++     +++
Sbjct: 4425 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWS 4475

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD D G+LG    +   +P  +  L     ++  CG   +V LT  G +YT G   + +
Sbjct: 4476 WGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHR 4535

Query: 516  LGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            LG+       + R +  ++GK     +  I++GS H    T  G V+TWG N  GQLG G
Sbjct: 4536 LGHGTDDHVRRPRKVAALQGKK----IISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4591

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
             +   + P  V AL+ +++  V CGS+ T A    K+         +Q RMP
Sbjct: 4592 TTSALQRPRLVHALQGKKITRVACGSAHTLAWSTMKA---------TQSRMP 4634



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 162/325 (49%), Gaps = 24/325 (7%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +G   D +V + K     L+P L  S  M+    +  G KHA  +T++G++F
Sbjct: 3312 GEGT-NGRLGLGDDSNVCEPK-----LIPFL--SQYMIKKVAVHSGGKHALALTQDGKIF 3363

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGEG+DG+LGH  ++ +  P+L+E L    ++ ++CG   + A+T SGE+YTWG   +G
Sbjct: 3364 SWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 3423

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLG 402
               +G   + +   P KL  +L G RV +VACG  +  T  ++  G ++++GDG FG LG
Sbjct: 3424 R--LGHGDTATQMKP-KLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG 3480

Query: 403  HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
             G       P  ++ L GL V  + CG   + A+              G+++TWG  D  
Sbjct: 3481 RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY-----------GEVWTWGKGDYF 3529

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
            RLGH +      PT V  L     V  + G +  + +T  G+VY  G   HGQ GN    
Sbjct: 3530 RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3589

Query: 523  DRSITVVEGKLKEEFVKGISSGSYH 547
                  +  +L +  V  +S GS H
Sbjct: 3590 VNKKPSLVHELDDARVNRVSCGSSH 3614



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 18/319 (5%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WG     +LG      +  P   E LS +    ++ G      +++ G++Y  G   
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 3315

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
            +G   +G+    S+    KL   L    + KVA   G  H   ++  G++F++G+G  G 
Sbjct: 3316 NGRLGLGD---DSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK 3372

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHGN  ++ +P+ +ESL+  +++ +ACG  H+AAI              G+L+TWG  +
Sbjct: 3373 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS-----------SGELYTWGLGE 3421

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
             GRLGH D   ++ P  V  LV    +Q +CG     T+ LT  G VY+ G    G+LG 
Sbjct: 3422 YGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGR 3481

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +      ++  +L    V  I  G+     LT  G V+TWGK    +LG G+      
Sbjct: 3482 GGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3541

Query: 579  PTFVEALRDRQVESVVCGS 597
            PT VE LR ++V  V  G+
Sbjct: 3542 PTLVEGLRGKKVVHVAVGA 3560



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 14/278 (5%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVST 386
           ALT+   +Y+WG+ + G    G+R     W    KL + L    ++ +ACG  ++A++S+
Sbjct: 511 ALTQDSSVYSWGNGDGGRLGHGDRV----WYDEPKLVEALVDKNITFIACGSTYSAVLSS 566

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           +G+L+T+G G +G LGHGN  NV  P  V +L G  V  VACG   +  +       C +
Sbjct: 567 NGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTL-------CVT 619

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +  G +F+WGD + G+LG    +    P  V +L+D +  +  CG   +  LT  G+VY
Sbjct: 620 AS--GIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVY 677

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           T G     +LG+   +      V   LK + VK +  G++HV  LT    VY WG+N  G
Sbjct: 678 TWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYG 737

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           Q+          PT    L  + +  + CG + + A C
Sbjct: 738 QIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWC 775



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 16/246 (6%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H   +T++  V+ WG G  GRLGH   +    PKLVE L   N+  ++CG   +  L+ +
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 567

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQL 390
           GE+YTWG  N+G   +G   S +  +P  L   L+G  V  VAC  G+  T  V+ SG +
Sbjct: 568 GELYTWGRGNYGR--LGHGNSDNVLIP-TLVTALNGHMVVYVACGSGDSQTLCVTASGIV 624

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           F++GDG +G LG G       PK V+ L  + V  V CG   +AA+              
Sbjct: 625 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY----------- 673

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+++TWG  +  RLGH + E    P  +  L      +   G    + LT    VY  G 
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGR 733

Query: 511 AVHGQL 516
             +GQ+
Sbjct: 734 NDYGQI 739



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 124/273 (45%), Gaps = 18/273 (6%)

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +Y WG N+   D +G  +     LP    + L  ++   +A G     +VS  G+L+  G
Sbjct: 3256 VYVWGLNDK--DQLGGLKGSKIKLP-VYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG 3312

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGGK 452
            +GT G LG G+  NV +PK +  L    +K VA   G  H  A+              GK
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQ-----------DGK 3361

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +F+WG+ + G+LGH +      P  +  L        +CG   +  +T  G++YT G   
Sbjct: 3362 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGE 3421

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS--YHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG+     +    +   L  + V  ++ GS       LT+ GSVY+WG    G+LG 
Sbjct: 3422 YGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGR 3481

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G S    TP  ++ L    V  + CG+  + A+
Sbjct: 3482 GGSDGCYTPLLIDRLNGLGVVQIECGAQFSLAL 3514



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +++WG+ D GRLGH D      P  V  LVD +    +CG   +  L+  G++YT G   
Sbjct: 518 VYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGN 577

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           +G+LG+  + +  I  +   L    V  ++  SG      +T+ G V++WG    G+LG 
Sbjct: 578 YGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 637

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G     +TP  V+ L D  V  V CG   +AA+  +  +
Sbjct: 638 GGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEV 676



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 6/165 (3%)

Query: 451  GKLFTWGDADKGRLGHVDG----ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            GKL+  G+   GRLG  D     E KL+P     ++    V    G    + LT  GK++
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKK--VAVHSGGKHALALTQDGKIF 3363

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            + G    G+LG+  +       +   LK + ++ I+ GS H A +TS G +YTWG    G
Sbjct: 3364 SWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 3423

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            +LG GD+  +  P  V++L  ++V  V CGS     + L    SV
Sbjct: 3424 RLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSV 3468



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DGS +          PK+++  + ++V  +  G + +A +T  
Sbjct: 624 VFSWGDGNYGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYCGGQFSAALTAY 673

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+ WG+G+  RLGH     +  PK++E L    V+ +  G F   ALT+   +Y WG 
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGR 733

Query: 341 NNHG 344
           N++G
Sbjct: 734 NDYG 737



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 73/168 (43%), Gaps = 22/168 (13%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG----ISSGSYHVAVLT 552
           + LT    VY+ G+   G+LG+    DR +   E KL E  V      I+ GS + AVL+
Sbjct: 510 LALTQDSSVYSWGNGDGGRLGH---GDR-VWYDEPKLVEALVDKNITFIACGSTYSAVLS 565

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
           S G +YTWG+   G+LG G+S     PT V AL    V  V CGS  +  +C+  S  V 
Sbjct: 566 SNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIV- 624

Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
                        F     N    G   C    T KI++  L  N  K
Sbjct: 625 -------------FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAK 659



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           S G++++A LT   SVY+WG    G+LG GD    + P  VEAL D+ +  + CGS+ +A
Sbjct: 504 SDGTHYLA-LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSA 562

Query: 602 AI 603
            +
Sbjct: 563 VL 564



 Score = 46.2 bits (108), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 3/91 (3%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P L+E      V ++++GA H   VT  G+V+ WG+   G+ G+   +    P LV  L 
Sbjct: 3542 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELD 3601

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
               V  VSCG   + A   + +  T   NNH
Sbjct: 3602 DARVNRVSCGSSHSIAWVLTDQPAT---NNH 3629


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 197/379 (51%), Gaps = 18/379 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   + +V  PK +  L
Sbjct: 2984 LPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFL 3043

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G++++WG    G   +G   + S   P KL +TL   
Sbjct: 3044 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK--LGHGNNMSLDKP-KLIETLKSK 3100

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A ++++G+L+T+G G +G LGHG+    ++PK V++L G +V  VACG
Sbjct: 3101 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACG 3160

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D C        +++WGD D G+LG    +    P  V RL     VQ 
Sbjct: 3161 S-RDAQTMALTTDGC--------VYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQV 3211

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + +  ++ G+ H 
Sbjct: 3212 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHC 3270

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +     P+ V  L D +V  V CGSS + A  L   
Sbjct: 3271 LAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIAWVLVDQ 3330

Query: 609  ISVGDQSSCS--QCRMPFG 625
             S G+Q   +    R P G
Sbjct: 3331 PSSGNQEPVTFPTARDPLG 3349



 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 197/407 (48%), Gaps = 37/407 (9%)

Query: 229  LGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            L  D  GA+ G    ++ Q+  L      LP   ES   L    ++ G +    VT +G+
Sbjct: 3937 LSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGK 3996

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGH 340
            V+  G G  GRLG      V  P L+E +  + ++  +VS G     AL+  G +Y+WG 
Sbjct: 3997 VYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGE 4056

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             + G   +G     S+  P KL + L GV +  +ACG  H+A ++++G L+T+G G +G 
Sbjct: 4057 GDDGK--LGHGNKMSYDRP-KLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGR 4113

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHG+  +  +PK VE+L+  KV  VACG      +       C ++     +++WGD D
Sbjct: 4114 LGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWSWGDGD 4164

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
             G+LG    +   +P  +  L     ++  CG   +V LT  G VYT G   + +LG+  
Sbjct: 4165 YGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4224

Query: 521  A----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
                 + R +  ++GK     +  I++GS H    +  G V+TWG N  GQLG G +   
Sbjct: 4225 DDHVRRPRKVAALQGKK----IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSAL 4280

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
              P  V AL+ +++  V CGS+ T A    K+         +Q RMP
Sbjct: 4281 HRPRLVHALQGKKITRVACGSAHTLAWSTAKA---------TQSRMP 4318



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 164/330 (49%), Gaps = 34/330 (10%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +G   D +V + K       P    S  ++    +  G KHA  +T++G+VF
Sbjct: 3019 GEGT-NGRLGLGDDNNVCEPK-------PIPFLSQFVIKKVAVHSGGKHALALTQDGKVF 3070

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGEG+DG+LGH  NM +  PKL+E L    ++ ++CG   + A+  +GE+YTWG   +G
Sbjct: 3071 SWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYG 3130

Query: 345  ----ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTF 398
                 D V + R        KL  TL G RV +VACG  +  T  ++T G ++++GDG F
Sbjct: 3131 RLGHGDTVTQARP-------KLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDF 3183

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LG G       P  VE L GL V  V CG   + A+              G+++TWG 
Sbjct: 3184 GKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKY-----------GEVWTWGK 3232

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             D  RLGH +      PT V  L     V  + G +  + +T  G+VY  G   HGQ GN
Sbjct: 3233 GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3292

Query: 519  -PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
               + +R  ++V  +L++  V  +S GS H
Sbjct: 3293 GTTSVNRKPSLVH-ELEDARVNRVSCGSSH 3321



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 12/278 (4%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT+ G +Y+WG+ + G   +G   + S+  P KL + L    +  +ACG  ++A +S S
Sbjct: 523 ALTQDGCVYSWGNGDGGR--LGHGDTVSYDEP-KLIEALLEKNIVFIACGSTYSAALSVS 579

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L+T+G G +G LGHGN  +V  P  V +L+G  V  VACG   +  +       C + 
Sbjct: 580 GELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTL-------CVTA 632

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +  G +F+WGD D G+LG    +    P  V +L+D + V+  CG   +  LT  G+VYT
Sbjct: 633 S--GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYT 690

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G     +LG+   +      +   L+++ +K +S G+ H+ VLT    VY WG+N  GQ
Sbjct: 691 WGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQ 750

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +          PT    L  + V  +  G + + A C+
Sbjct: 751 IDPTLGSVISEPTLCPTLSSKTVIGLASGPTQSFAWCM 788



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 146/318 (45%), Gaps = 22/318 (6%)

Query: 229 LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
           L G++     GS +Q   +V     KL+       + + S G  H AL T++G V+ WG 
Sbjct: 482 LNGNVYNMYHGSETQYPQRVHGFSDKLVTM-----IASHSDGKHHLAL-TQDGCVYSWGN 535

Query: 289 GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
           G  GRLGH   +    PKL+E L   N+  ++CG   + AL+ SGE+YTWG  N+G   +
Sbjct: 536 GDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGR--L 593

Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNL 406
           G        +P  L  TL G  V  VAC  G+  T  V+ SG +F++GDG +G LG G  
Sbjct: 594 GHGNFDDVMIP-TLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGT 652

Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
                PK V+ L  + V  V CG   +AA+              G+++TWG  D  RLGH
Sbjct: 653 DGSKTPKIVDKLLDINVVKVFCGSQFSAAL-----------TAHGEVYTWGKGDTYRLGH 701

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
              E    P  +  L D      S G    + LT    VY  G   +GQ+        S 
Sbjct: 702 GSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISE 761

Query: 527 TVVEGKLKEEFVKGISSG 544
             +   L  + V G++SG
Sbjct: 762 PTLCPTLSSKTVIGLASG 779



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 120/276 (43%), Gaps = 81/276 (29%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WGEG          DG +   NK   D   PKL+E  + +++ +I+ G  H+A +T 
Sbjct: 4051 VYSWGEGD---------DGKLGHGNKMSYDR--PKLIEDLLGVEIIDIACGGHHSAAITS 4099

Query: 280  EGEVFCWGEGKDGRLGH------------------KVNMDVSC----------------- 304
             G ++ WG+G+ GRLGH                  KV +DV+C                 
Sbjct: 4100 AGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKV-IDVACGSGDAQTLCVTDDDNVW 4158

Query: 305  --------------------PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-- 342
                                P  ++ L+G+ V  V CG   + ALT+SG +YTWG  +  
Sbjct: 4159 SWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH 4218

Query: 343  ---HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
               HG D    R       PRK+   L G ++  +A G  H    S  G++FT+GD   G
Sbjct: 4219 RLGHGTDDHVRR-------PRKV-AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEG 4270

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
             LG G    + +P+ V +L+G K+  VACG  HT A
Sbjct: 4271 QLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4306



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 118/274 (43%), Gaps = 32/274 (11%)

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            YT  H NH     G       WL R+  D              W T     SG ++ +G 
Sbjct: 3906 YTKDHENHNIFKQGHDEQLLQWLNRRPED--------------W-TLSWDGSGAIYGWGH 3950

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
               G LG      V  P   ESL  L+   +A G     A+              GK+++
Sbjct: 3951 NHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT-----------ADGKVYS 3999

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
             G    GRLG    +  ++PT +  +  V    V  S G    + L+  G VY+ G    
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDD 4059

Query: 514  GQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            G+LG  N  + DR   ++E  L  E +  I+ G +H A +TS G +YTWGK   G+LG G
Sbjct: 4060 GKLGHGNKMSYDRP-KLIEDLLGVEIID-IACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4117

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            DS ++  P  VEAL+D +V  V CGS     +C+
Sbjct: 4118 DSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 27/251 (10%)

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           D +  + + ++ C E    I+S +G ++         + HG+      P+ V       V
Sbjct: 460 DAIAELGIKQLCCTERALMILSLNGNVYN--------MYHGS--ETQYPQRVHGFSDKLV 509

Query: 424 KSVAC---GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
             +A    G  H A   D            G +++WG+ D GRLGH D      P  +  
Sbjct: 510 TMIASHSDGKHHLALTQD------------GCVYSWGNGDGGRLGHGDTVSYDEPKLIEA 557

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           L++ + V  +CG   +  L+  G++YT G   +G+LG+    D  I  +   LK   V  
Sbjct: 558 LLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVH 617

Query: 541 IS--SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
           ++  SG      +T+ G V++WG    G+LG G +   +TP  V+ L D  V  V CGS 
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQ 677

Query: 599 ITAAICLHKSI 609
            +AA+  H  +
Sbjct: 678 FSAALTAHGEV 688



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     +  + G      ++  GK+Y  G   
Sbjct: 2963 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGT 3022

Query: 513  HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG    N   + + I  +   + ++    + SG  H   LT  G V++WG+  +G+L
Sbjct: 3023 NGRLGLGDDNNVCEPKPIPFLSQFVIKKV--AVHSGGKHALALTQDGKVFSWGEGEDGKL 3080

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G G++   + P  +E L+ +++  + CGS  +AAI
Sbjct: 3081 GHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAI 3115



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK++ES     ++++S+GA H  ++T++  V+ WG    G++   +   +S P L   LS
Sbjct: 710 PKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLS 769

Query: 313 GINVQSVSCGEFQTCA 328
              V  ++ G  Q+ A
Sbjct: 770 SKTVIGLASGPTQSFA 785


>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  189 bits (479), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 78/158 (49%), Positives = 120/158 (75%), Gaps = 2/158 (1%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           F WGE  +GRLGH V+ +V  PKL++ L   N++ V+CGE+ +CA++ SG++YTWG  + 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G  ++G     SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGH
Sbjct: 61  G--ILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           G+ ++V  P+E++SL+GL+    ACG WHTAA+V++MV
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEVMV 156



 Score =  106 bits (265), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 15/158 (9%)

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           ++WG  + G    G   +  H    KL D L    +  VACGE+H+  VS SG L+T+G 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQH---PKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 396 GTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G FG+LGHGN  +   PK V  L  G+ V S+ACGP+HTA +              G+LF
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTS-----------AGQLF 106

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T+GD   G LGH D +   +P  +  L     V+A+CG
Sbjct: 107 TFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACG 144



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/162 (33%), Positives = 91/162 (56%), Gaps = 14/162 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE    G +G  VD +V           PKL+++    +++ ++ G  H+  V+  G++
Sbjct: 3   WGEES-EGRLGHGVDSNVQH---------PKLIDALGTTNIELVACGEYHSCAVSLSGDL 52

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           + WG+G  G LGH   +    PK V  L  GI+V S++CG + T  +T +G+++T+G   
Sbjct: 53  YTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 112

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            G    G+R+S   ++PR++ D+L G+R  + ACG WHTA V
Sbjct: 113 FGVLGHGDRKSV--FIPREI-DSLKGLRTVRAACGVWHTAAV 151



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 1/151 (0%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F+WG+  +GRLGH        P  +  L   +    +CG   +  ++  G +YT G    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           G LG+       +      L E   V  I+ G YH AV+TS G ++T+G    G LG GD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +    P  +++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 17/116 (14%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK----LLESAVMLDVQNISLGAKHAA 275
           D+  WG+G  G          +  +  +V   +PK    L+E    + V +I+ G  H A
Sbjct: 51  DLYTWGKGDFG----------ILGHGNEVSHWVPKRVNFLMEG---IHVSSIACGPYHTA 97

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +VT  G++F +G+G  G LGH     V  P+ ++ L G+     +CG + T A+ +
Sbjct: 98  VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVE 153


>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  188 bits (478), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 79/158 (50%), Positives = 120/158 (75%), Gaps = 2/158 (1%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           F WGE  +GRLGH V+ +V  PKL++ L   N++ V+CGE+ +CA++ SG++YTWG  + 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G  ++G     SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGH
Sbjct: 61  G--ILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           G+ ++V  P+EV+SL+GL+    ACG WHTAA+V++MV
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMV 156



 Score =  107 bits (266), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 15/158 (9%)

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           ++WG  + G    G   +  H    KL D L    +  VACGE+H+  VS SG L+T+G 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQH---PKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 396 GTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G FG+LGHGN  +   PK V  L  G+ V S+ACGP+HTA +              G+LF
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTS-----------AGQLF 106

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T+GD   G LGH D +   +P  V  L     V+A+CG
Sbjct: 107 TFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 144



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 14/162 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE    G +G  VD +V           PKL+++    +++ ++ G  H+  V+  G++
Sbjct: 3   WGEES-EGRLGHGVDSNVQH---------PKLIDALGTTNIELVACGEYHSCAVSLSGDL 52

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           + WG+G  G LGH   +    PK V  L  G++V S++CG + T  +T +G+++T+G   
Sbjct: 53  YTWGKGDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGT 112

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            G    G+R+S   ++PR++ D+L G+R  + ACG WHTA V
Sbjct: 113 FGVLGHGDRKSV--FIPREV-DSLKGLRTVRAACGVWHTAAV 151



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 1/151 (0%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F+WG+  +GRLGH        P  +  L   +    +CG   +  ++  G +YT G    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           G LG+       +      L E   V  I+ G YH AV+TS G ++T+G    G LG GD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +    P  V++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 17/116 (14%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK----LLESAVMLDVQNISLGAKHAA 275
           D+  WG+G  G          +  +  +V   +PK    L+E    + V +I+ G  H A
Sbjct: 51  DLYTWGKGDFG----------ILGHGNEVSHWVPKRVNFLMEG---MHVSSIACGPYHTA 97

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +VT  G++F +G+G  G LGH     V  P+ V+ L G+     +CG + T A+ +
Sbjct: 98  VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 153


>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  188 bits (478), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/158 (49%), Positives = 120/158 (75%), Gaps = 2/158 (1%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           F WGE  +GRLGH V+ +V  PKL++ L   N++ V+CGE+ +CA++ SG++YTWG  + 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G  ++G     SHW+P+++   ++G+ VS +ACG +HTA+V+++GQLFT+GDGTFGVLGH
Sbjct: 61  G--ILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           G+ ++V  P+E++SL+GL+    ACG WHTAA+V++MV
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEVMV 156



 Score =  102 bits (255), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 15/158 (9%)

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           ++WG  + G    G   +  H    KL D L    +  VACGE+ +  VS SG L+T+G 
Sbjct: 1   FSWGEESEGRLGHGVDSNVQH---PKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGK 57

Query: 396 GTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G FG+LGHGN  +   PK V  L  G+ V S+ACGP+HTA +              G+LF
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTS-----------AGQLF 106

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T+GD   G LGH D +   +P  +  L     V+A+CG
Sbjct: 107 TFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACG 144



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 14/162 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE    G +G  VD +V           PKL+++    +++ ++ G   +  V+  G++
Sbjct: 3   WGEES-EGRLGHGVDSNVQH---------PKLIDALGTTNIELVACGEYXSCAVSLSGDL 52

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           + WG+G  G LGH   +    PK V  L  GI+V S++CG + T  +T +G+++T+G   
Sbjct: 53  YTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGT 112

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            G    G+R+S   ++PR++ D+L G+R  + ACG WHTA V
Sbjct: 113 FGVLGHGDRKSV--FIPREI-DSLKGLRTVRAACGVWHTAAV 151



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 1/151 (0%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F+WG+  +GRLGH        P  +  L   +    +CG   +  ++  G +YT G    
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           G LG+       +      L E   V  I+ G YH AV+TS G ++T+G    G LG GD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +    P  +++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 17/116 (14%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK----LLESAVMLDVQNISLGAKHAA 275
           D+  WG+G  G          +  +  +V   +PK    L+E    + V +I+ G  H A
Sbjct: 51  DLYTWGKGDFG----------ILGHGNEVSHWVPKRVNFLMEG---IHVSSIACGPYHTA 97

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +VT  G++F +G+G  G LGH     V  P+ ++ L G+     +CG + T A+ +
Sbjct: 98  VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVE 153


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  187 bits (475), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 194/366 (53%), Gaps = 16/366 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   + +V  PK +  L
Sbjct: 2957 LPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFL 3016

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ VS   G     ALT+ G++++WG    G   +G   S S   PR L ++L   
Sbjct: 3017 SQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK--LGHGNSISLDKPR-LIESLKSK 3073

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+    S+PK V+SL G ++  +ACG
Sbjct: 3074 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACG 3133

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  + RL     VQ 
Sbjct: 3134 S-RDAQTMALTAD--------GLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQI 3184

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + V  ++ G+ H 
Sbjct: 3185 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKVIHVAVGALHC 3243

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +   + P+ V  L D +V  V CGSS + A  L   
Sbjct: 3244 LAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3303

Query: 609  ISVGDQ 614
             ++ +Q
Sbjct: 3304 PTINNQ 3309



 Score =  179 bits (453), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 197/408 (48%), Gaps = 37/408 (9%)

Query: 228  VLGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEG 281
            +L  D  GA+ G    ++ Q+  L      LP L ES   L    ++ G +    VT +G
Sbjct: 3946 MLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADG 4005

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWG 339
            +V+  G G  GRLG      V  P L+E +  + V+  +V+ G     AL+  G +Y+WG
Sbjct: 4006 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4065

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              + G    G R S       KL + L G  +  +ACG  H+A ++++G L+T+G G +G
Sbjct: 4066 EGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 4122

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHG+ ++   PK +E+L+  KV  VACG      +       C ++     +++WGD 
Sbjct: 4123 RLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWSWGDG 4173

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            D G+LG    +   +P  +  L     V+  CG   +V LT  G +YT G   + +LG+ 
Sbjct: 4174 DYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4233

Query: 520  KA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
                  + R +  ++GK     +  I++GS H    T  G V+TWG N  GQLG G +  
Sbjct: 4234 TDDHVRRPRKVAALQGKK----IISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSA 4289

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
             + P  V AL+ +++  V CGS+ T A    K+         +Q +MP
Sbjct: 4290 LQRPRLVHALQGKKITRVACGSAHTLAWSTMKA---------TQSKMP 4328



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 161/325 (49%), Gaps = 24/325 (7%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +G   D +V + K       P    S  ++   ++  G KHA  +T++G+VF
Sbjct: 2992 GEGT-NGRLGLGDDSNVCEPK-------PIPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGEG+DG+LGH  ++ +  P+L+E L    ++ ++CG   + A+T SGE+YTWG   +G
Sbjct: 3044 SWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 3103

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLG 402
                G+  ++S     KL  +L G R+ ++ACG  +  T  ++  G ++++GDG FG LG
Sbjct: 3104 RLGHGDTATQSK---PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLG 3160

Query: 403  HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
             G       P  ++ L GL V  + CG   + A+              G+++TWG  D  
Sbjct: 3161 RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY-----------GEVWTWGKGDYF 3209

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
            RLGH +      PT V  L     +  + G +  + +T +G+VY  G   HGQ GN    
Sbjct: 3210 RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI 3269

Query: 523  DRSITVVEGKLKEEFVKGISSGSYH 547
                  +  +L +  V  +S GS H
Sbjct: 3270 VNKKPSLVHELDDARVNRVSCGSSH 3294



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 14/278 (5%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVST 386
           ALT+   +Y+WG+ + G    G+R     W    KL + L    ++ +ACG  ++A +S+
Sbjct: 519 ALTQDNSVYSWGNGDGGRLGHGDRA----WYDEPKLIEALVEKNITFIACGSTYSAALSS 574

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           +G+L+T+G G +G LGHGN  NV  P  V +L G  V  VACG   +  +       C +
Sbjct: 575 NGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTL-------CVT 627

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +  G +F+WGD + G+LG    +    P  V +L+D +  +  CG   +  LT  G+VY
Sbjct: 628 AS--GIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVY 685

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           T G     +LG+          +   LK + VK +  G+ HV  LT    +Y WG+N  G
Sbjct: 686 TWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYG 745

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           Q+          PT    L  + V  + CG + + A C
Sbjct: 746 QIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWC 783



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 148/317 (46%), Gaps = 14/317 (4%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WG     +LG      +  P   E LS +    ++ G      +++ G++Y  G   
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2995

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            +G   +G+  +     P          +VS V  G  H   ++  G++F++G+G  G LG
Sbjct: 2996 NGRLGLGDDSNVCEPKPIPFLSQYVIKKVS-VHSGGKHALALTQDGKVFSWGEGEDGKLG 3054

Query: 403  HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            HGN  ++ +P+ +ESL+  +++ +ACG  H+AAI              G+L+TWG  + G
Sbjct: 3055 HGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS-----------SGELYTWGLGEYG 3103

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            RLGH D   +  P  V  LV    +Q +CG     T+ LT  G VY+ G    G+LG   
Sbjct: 3104 RLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3163

Query: 521  AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +      ++  +L    V  I  G+     LT  G V+TWGK    +LG G+      PT
Sbjct: 3164 SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3223

Query: 581  FVEALRDRQVESVVCGS 597
             VE LR ++V  V  G+
Sbjct: 3224 LVEGLRGKKVIHVAVGA 3240



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 16/246 (6%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H   +T++  V+ WG G  GRLGH        PKL+E L   N+  ++CG   + AL+ +
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQL 390
           GE+YTWG  N+G   +G   S +  +P  L   L+G  V  VAC  G+  T  V+ SG +
Sbjct: 576 GELYTWGRGNYGR--LGHGNSDNVMIP-TLVTALNGHMVVYVACGSGDSQTLCVTASGIV 632

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           F++GDG +G LG G       PK V+ L  + V  V CG   +AA+              
Sbjct: 633 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY----------- 681

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+++TWG  +  RLGH + +    P  +  L      +   G +  + LT    +Y  G 
Sbjct: 682 GEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGR 741

Query: 511 AVHGQL 516
             +GQ+
Sbjct: 742 NDYGQI 747



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 16/242 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+E+ V  ++  I+ G+ ++A ++  GE++ WG G  GRLGH  + +V  P LV  L+
Sbjct: 548 PKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALN 607

Query: 313 GINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           G  V  V+C  G+ QT  +T SG +++WG  N+G   +G         P K+ D L  + 
Sbjct: 608 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGK--LGRGGCDGSKTP-KIVDKLLDIN 664

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V+KV CG   +A ++  G+++T+G G    LGHGN  +V  PK ++ L+  KVK +  G 
Sbjct: 665 VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGN 724

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            H  A+ +  +           ++ WG  D G++    G     PT    L   + +  +
Sbjct: 725 LHVLALTEDQL-----------IYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLA 773

Query: 491 CG 492
           CG
Sbjct: 774 CG 775



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 32/318 (10%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG  K G        + S P   + ++ + ++ + C E     L+ +G +Y     
Sbjct: 437 EVIAWGSVKLG--------NGSSPFYYDTIAELGIKQLCCTERALMILSVNGNVYMM--- 485

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
            +G++    +R          F     + ++  + G  H   ++    ++++G+G  G L
Sbjct: 486 YYGSETQYPQRVYG-------FSEKPIIMIASHSDGT-HYLALTQDNSVYSWGNGDGGRL 537

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           GHG+     +PK +E+L    +  +ACG  ++AA+         SN   G+L+TWG  + 
Sbjct: 538 GHGDRAWYDEPKLIEALVEKNITFIACGSTYSAAL--------SSN---GELYTWGRGNY 586

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNP 519
           GRLGH + +  ++PT VT L     V  +CG     T+ +T  G V++ G   +G+LG  
Sbjct: 587 GRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG 646

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
                    +  KL +  V  +  G    A LT+ G VYTWGK    +LG G+      P
Sbjct: 647 GCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYP 706

Query: 580 TFVEALRDRQVESVVCGS 597
             ++ L+ ++V+ +  G+
Sbjct: 707 KIIDILKTKKVKELCVGN 724



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
           +DT+  + + ++ C E    I+S +G ++    G             S+ +  + + G  
Sbjct: 455 YDTIAELGIKQLCCTERALMILSVNGNVYMMYYG-------------SETQYPQRVYGFS 501

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
            K +     H+     + + +  S      +++WG+ D GRLGH D      P  +  LV
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNS------VYSWGNGDGGRLGHGDRAWYDEPKLIEALV 555

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
           + +    +CG   +  L+  G++YT G   +G+LG+  + +  I  +   L    V  ++
Sbjct: 556 EKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVA 615

Query: 543 --SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
             SG      +T+ G V++WG    G+LG G     +TP  V+ L D  V  V CG   +
Sbjct: 616 CGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFS 675

Query: 601 AAICLHKSI 609
           AA+  +  +
Sbjct: 676 AALTAYGEV 684



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 13/167 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            +P  +ES   L V  +  G++ +  +T+
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDG----------CKIPMKIESLAGLGVVKVECGSQFSVALTR 4215

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G ++ WG+G   RLGH  +  V  P+ V  L G  + S++ G     A T  GE++TWG
Sbjct: 4216 SGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWG 4275

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             N+ G   +G+  + +   PR L   L G ++++VACG  HT   ST
Sbjct: 4276 DNDEGQ--LGDGTTSALQRPR-LVHALQGKKITRVACGSAHTLAWST 4319



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 80/191 (41%), Gaps = 23/191 (12%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G      VT  G VF WG+G  G+LG         PK+V+ L  INV  V CG   + AL
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAAL 678

Query: 330 TKSGEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T  GE+YTWG        HG        +  H    K+ D L   +V ++  G  H   +
Sbjct: 679 TAYGEVYTWGKGEAYRLGHG--------NEDHVRYPKIIDILKTKKVKELCVGNLHVLAL 730

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP----------WHTA 434
           +    ++ +G   +G +       V +P    +L G  V  +ACGP          W  A
Sbjct: 731 TEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTSAWSVA 790

Query: 435 AIVDIMVDRCK 445
             V  +VD C+
Sbjct: 791 NRVAFVVDICE 801



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     V  + G      ++  GK+Y  G   
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2995

Query: 513  HGQLGNPKAKDRSITVVEGK----LKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANG 566
            +G+LG     D S  V E K    L +  +K +S  SG  H   LT  G V++WG+  +G
Sbjct: 2996 NGRLG---LGDDS-NVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDG 3051

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G+S   + P  +E+L+ +++  + CGS  +AAI
Sbjct: 3052 KLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI 3088



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 17/159 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DGS +          PK+++  + ++V  +  G + +A +T  
Sbjct: 632 VFSWGDGNYGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYCGGQFSAALTAY 681

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+ WG+G+  RLGH     V  PK+++ L    V+ +  G     ALT+   IY WG 
Sbjct: 682 GEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGR 741

Query: 341 NNHGA--DLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N++G     +G         P     TL G  V  +ACG
Sbjct: 742 NDYGQIDPALGTVVPEPTLCP-----TLSGKNVIGLACG 775


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 194/366 (53%), Gaps = 16/366 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   + +V  PK +  L
Sbjct: 2813 LPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFL 2872

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G++++WG    G   +G   S S   PR L ++L   
Sbjct: 2873 SQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK--LGHGNSISLDKPR-LIESLKSK 2929

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+    S+PK V+SL G +V  +ACG
Sbjct: 2930 RIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACG 2989

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  + RL     VQ 
Sbjct: 2990 S-RDAQTMALTAD--------GLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQI 3040

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + +  ++ G+ H 
Sbjct: 3041 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHC 3099

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +   + P+ V  L D +V  V CGSS + A  L   
Sbjct: 3100 LAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3159

Query: 609  ISVGDQ 614
             ++ +Q
Sbjct: 3160 PAINNQ 3165



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/408 (30%), Positives = 197/408 (48%), Gaps = 37/408 (9%)

Query: 228  VLGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEG 281
            +L  D  GA+ G    ++ Q+  L      LP L ES   L    ++ G +    VT +G
Sbjct: 3777 MLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADG 3836

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWG 339
            +V+  G G  GRLG      V  P L+E +  + V+  +V+ G     AL+  G +Y+WG
Sbjct: 3837 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 3896

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              + G    G R S       KL + L G  +  +ACG  H+A ++++G L+T+G G +G
Sbjct: 3897 EGDDGKLGHGNRLSYDR---PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYG 3953

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHG+ ++   PK +E+L+  KV  VACG      +       C ++     +++WGD 
Sbjct: 3954 RLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWSWGDG 4004

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            D G+LG    +   +P  +  L     ++  CG   +V LT  G +YT G   + +LG+ 
Sbjct: 4005 DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4064

Query: 520  KA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
                  + R +  ++GK     +  I++GS H    T  G V+TWG N  GQLG G +  
Sbjct: 4065 TDDHVRRPRKVAALQGKK----IISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSA 4120

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
             + P  V AL+ +++  V CGS+ T A    K+         +Q +MP
Sbjct: 4121 LQRPRLVHALQGKKITRVACGSAHTLAWSTMKA---------TQSKMP 4159



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 160/325 (49%), Gaps = 24/325 (7%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +G   D +V + K       P    S  ++    +  G KHA  +T++G+VF
Sbjct: 2848 GEGT-NGRLGLGDDSNVCEPK-------PIPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGEG+DG+LGH  ++ +  P+L+E L    ++ ++CG   + A+T SGE+YTWG   +G
Sbjct: 2900 SWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYG 2959

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLG 402
                G+  ++S     KL  +L G RV ++ACG  +  T  ++  G ++++GDG FG LG
Sbjct: 2960 RLGHGDTATQSK---PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLG 3016

Query: 403  HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
             G       P  ++ L GL V  + CG   + A+              G+++TWG  D  
Sbjct: 3017 RGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY-----------GEVWTWGKGDYF 3065

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
            RLGH +      PT V  L     +  + G +  + +T +G+VY  G   HGQ GN    
Sbjct: 3066 RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI 3125

Query: 523  DRSITVVEGKLKEEFVKGISSGSYH 547
                  +  +L +  V  +S GS H
Sbjct: 3126 VNKKPSLVHELDDARVNRVSCGSSH 3150



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 150/319 (47%), Gaps = 18/319 (5%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WG     +LG      +  P   E LS +    ++ G      +++ G++Y  G   
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2851

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
            +G   +G+    S+    K    L    + KVA   G  H   ++  G++F++G+G  G 
Sbjct: 2852 NGRLGLGD---DSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2908

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHGN  ++ +P+ +ESL+  +++ +ACG  H+AAI              G+L+TWG  +
Sbjct: 2909 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS-----------SGELYTWGLGE 2957

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
             GRLGH D   +  P  V  LV    +Q +CG     T+ LT  G VY+ G    G+LG 
Sbjct: 2958 YGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGR 3017

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +      ++  +L    V  I  G+     LT  G V+TWGK    +LG G+      
Sbjct: 3018 GGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3077

Query: 579  PTFVEALRDRQVESVVCGS 597
            PT VE LR +++  V  G+
Sbjct: 3078 PTLVEGLRGKKIIHVAVGA 3096



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 12/278 (4%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT+   +Y+WG+   G   +G      +  P KL + L    ++ +ACG  ++A +S++
Sbjct: 516 ALTQDNSVYSWGNGECGR--LGHGNMTWYDEP-KLIEALVEKNITFIACGSTYSAALSSN 572

Query: 388 GQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           G+L+T+G G +G LGHGN  ++V  P  V +L G  V  VACG       + +       
Sbjct: 573 GELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTA----- 627

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G +F+WGD + G+LG    +    P  V +L+D +  +  CG+  +  LT  G+VY
Sbjct: 628 ---SGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVY 684

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           T G     +LG+          +   LK + +K +  G  HV  LT    VY WG+N +G
Sbjct: 685 TWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHG 744

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           Q+          PT       + V  + CG + + A C
Sbjct: 745 QIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWC 782



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H   +T++  V+ WG G+ GRLGH        PKL+E L   N+  ++CG   + AL+ +
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG---EWHTAIVSTSGQ 389
           GE+YTWG  N+G   +G   S    +   L   L+G  V  VACG   +  T  V+ SG 
Sbjct: 573 GELYTWGRGNYGK--LGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGI 630

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           +F++GDG  G LG G       PK V+ L  + V  V CG   +AA+             
Sbjct: 631 VFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAY---------- 680

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G+++TWG  +  +LGH + +    P  +  L          G +  + LT    VY  G
Sbjct: 681 -GEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739

Query: 510 SAVHGQL 516
              HGQ+
Sbjct: 740 RNDHGQI 746



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 123/232 (53%), Gaps = 22/232 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECL 311
           PKL+E+ V  ++  I+ G+ ++A ++  GE++ WG G  G+LGH   + DV  P LV  L
Sbjct: 545 PKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTAL 604

Query: 312 SGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           +G  V  V+CG   + QT  +T SG +++WG  NHG   +G         P K+ D L  
Sbjct: 605 NGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGK--LGRGGCDGSKTP-KIVDKLLD 661

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + V+KV CG+  +A ++  G+++T+G G    LGHGN  +V  PK ++ L+  K+K +  
Sbjct: 662 INVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI 721

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR----LGHVDGERKLLPT 476
           G  H  A+ +  +           ++ WG  D G+    LG +  E  L PT
Sbjct: 722 GHLHVLALTEDQL-----------VYGWGRNDHGQIDPALGTIVPEPTLCPT 762



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 162/392 (41%), Gaps = 66/392 (16%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG          V  +   P   + +S + ++ + C E     L+ +G +Y   + 
Sbjct: 437 EVIAWGS--------VVTFNGPSPVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYY- 487

Query: 342 NHGADLVGERRSRSHWLPRKLFDTL----DGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
                  G    R +    K    +    DG           H   ++    ++++G+G 
Sbjct: 488 -------GSETQRVYGFSEKPITMIASHSDGT----------HYLALTQDNSVYSWGNGE 530

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGHGN+    +PK +E+L    +  +ACG  ++AA+         SN   G+L+TWG
Sbjct: 531 CGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL--------SSN---GELYTWG 579

Query: 458 DADKGRLGHVDGERK-LLPTCVTRLVDFDFVQASCG---RMLTVGLTGLGKVYTMGSAVH 513
             + G+LGH + ++  ++PT VT L     V  +CG      T+ +T  G V++ G   H
Sbjct: 580 RGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNH 639

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           G+LG           +  KL +  V  +  G    A LT+ G VYTWGK  + +LG G+ 
Sbjct: 640 GKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
                P  ++ L+ ++++ +  G        LH      DQ       + +G+ R  H  
Sbjct: 700 DHVRYPKIIDILKTKKIKDLYIGH-------LHVLALTEDQ-------LVYGWGRNDHGQ 745

Query: 634 YNCGL-------HFCSACSTKKIINASLTPNK 658
            +  L         C   S K +I  +  P +
Sbjct: 746 IDPALGTIVPEPTLCPTFSGKNVIGLACGPTQ 777



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 13/167 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            +P  +ES   L V  +  G++ +  +T+
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDG----------CKIPMKIESLAGLGVIKVECGSQFSVALTR 4046

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G ++ WG+G   RLGH  +  V  P+ V  L G  + S++ G     A T  GE++TWG
Sbjct: 4047 SGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWG 4106

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             N+ G   +G+  + +   PR L   L G ++++VACG  HT   ST
Sbjct: 4107 DNDEGQ--LGDGTTSALQRPR-LVHALQGKKITRVACGSAHTLAWST 4150



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 16/220 (7%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGA---KHAALVTKEGEVFCWGEGKDGRLG 295
           G +    +  D ++P L+ +     V  ++ G         VT  G VF WG+G  G+LG
Sbjct: 584 GKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLG 643

Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
                    PK+V+ L  INV  V CG+  + ALT  GE+YTWG    G D      +  
Sbjct: 644 RGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWG---KGEDYKLGHGNED 700

Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           H    K+ D L   ++  +  G  H   ++    ++ +G    G +       V +P   
Sbjct: 701 HVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLC 760

Query: 416 ESLRGLKVKSVACGP----------WHTAAIVDIMVDRCK 445
            +  G  V  +ACGP          W  A  V  +VD C+
Sbjct: 761 PTFSGKNVIGLACGPTQSFAWCTAAWSVANRVAFVVDICE 800



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DGS +          PK+++  + ++V  +  G + +A +T  
Sbjct: 631 VFSWGDGNHGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYCGQQFSAALTAY 680

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+ WG+G+D +LGH     V  PK+++ L    ++ +  G     ALT+   +Y WG 
Sbjct: 681 GEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGR 740

Query: 341 NNHG 344
           N+HG
Sbjct: 741 NDHG 744



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     V  + G      ++  GK+Y  G   
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2851

Query: 513  HGQLGNPKAKDRSITVVEGK----LKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANG 566
            +G+LG     D S  V E K    L +  +K   + SG  H   LT  G V++WG+  +G
Sbjct: 2852 NGRLG---LGDDS-NVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G+S   + P  +E+L+ +++  + CGS  +AAI
Sbjct: 2908 KLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI 2944


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 191/366 (52%), Gaps = 16/366 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   N +V  PK +  L
Sbjct: 2945 LPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFL 3004

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G++++WG    G    G R S     PR L + L   
Sbjct: 3005 SQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDK--PR-LIEALKSK 3061

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A ++++G+L+T+G G +G LGHG+     +PK V++L G +V  VACG
Sbjct: 3062 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACG 3121

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  V RL     VQ 
Sbjct: 3122 S-RDAQTMALTED--------GSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQV 3172

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + V  ++ G+ H 
Sbjct: 3173 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEG-LRGKKVVHVAVGALHC 3231

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +     P+ V  L D +V  V CGSS + A  L   
Sbjct: 3232 LAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQ 3291

Query: 609  ISVGDQ 614
             ++G+Q
Sbjct: 3292 PTLGNQ 3297



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 189/386 (48%), Gaps = 28/386 (7%)

Query: 229  LGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            L  D  GA+ G    ++ Q+  L      LP   ES   L    ++ G +    VT +G+
Sbjct: 3888 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGK 3947

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGH 340
            V+  G G  GRLG      V  P L+E +  + ++  +V+ G     AL+  G +Y+WG 
Sbjct: 3948 VYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGE 4007

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             + G    G R +       KL + L G  +  +ACG  H+A +S++G L+T+G G +G 
Sbjct: 4008 GDDGKLGHGNRITYDR---PKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGR 4064

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHG+  +  +P  V +L+G KV  VACG      +       C ++     +++WGD D
Sbjct: 4065 LGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTL-------CVTD--DDNVWSWGDGD 4115

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
             G+LG    +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+  
Sbjct: 4116 YGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4175

Query: 521  A----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
                 + R ++ ++GK     +  I++GS H    +  G VYTWG N  GQLG G +  +
Sbjct: 4176 DDHVRRPRKVSALQGKK----IVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQ 4231

Query: 577  ETPTFVEALRDRQVESVVCGSSITAA 602
            ++P  V AL+ + +  V CGS+ T A
Sbjct: 4232 QSPRLVHALQGKNITRVACGSAHTLA 4257



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 163/325 (50%), Gaps = 27/325 (8%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G KHA  +T++G+VF WGEG+DG+LGH   + +  P+L+E L    ++ ++CG   + A+
Sbjct: 3017 GGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAI 3076

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
              +GE+YTWG   +G   +G   + +H  P KL D L G RV +VACG  +  T  ++  
Sbjct: 3077 ASNGELYTWGLGEYGR--LGHGDTTTHLKP-KLVDALVGQRVIQVACGSRDAQTMALTED 3133

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G ++++GDG FG LG G       P  V+ L GL V  V CG   + A+           
Sbjct: 3134 GSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKY-------- 3185

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G+++TWG  D  RLGH +      PT V  L     V  + G +  + +T  G+VY 
Sbjct: 3186 ---GEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYA 3242

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYH--VAVLTSGGSV------- 557
             G   HGQ GN     +R  ++V   L++  V  ++ GS H    VLT   ++       
Sbjct: 3243 WGDNDHGQQGNGSTMVNRKPSLVH-NLEDAKVNRVACGSSHSIAWVLTDQPTLGNQEPVT 3301

Query: 558  YTWGKNANGQLGLGDSQERETPTFV 582
            +   K+  GQ  LG +Q++     V
Sbjct: 3302 FPTAKDPLGQATLGFTQDKTETNVV 3326



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 153/327 (46%), Gaps = 28/327 (8%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGE 282
            G G LG    G VD            ++P LLES   + ++ +++  G KH   ++ EG 
Sbjct: 3952 GYGALGRLGTGGVD----------SVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGH 4001

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WGEG DG+LGH   +    PKL+E L G  +  ++CG   + A++ +G +YTWG   
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGR 4061

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
            +G   +G   S     P  +   L G +V  VAC  G+  T  V+    ++++GDG +G 
Sbjct: 4062 YGR--LGHGDSDDQLKP-TVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGK 4118

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LG G       P ++ESL GL V  V CG   + A+              G ++TWG  D
Sbjct: 4119 LGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTR-----------SGAVYTWGKGD 4167

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
              RLGH   +    P  V+ L     V  + G +  V  +  G+VYT G    GQLG+  
Sbjct: 4168 YHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGT 4227

Query: 521  AKDRSITVVEGKLKEEFVKGISSGSYH 547
               +    +   L+ + +  ++ GS H
Sbjct: 4228 THAQQSPRLVHALQGKNITRVACGSAH 4254



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 141/275 (51%), Gaps = 28/275 (10%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WGEG          DG +   N+  +D   P+L+E+     +++I+ G+ H+A +  
Sbjct: 3030 VFSWGEGE---------DGKLGHGNRVSLDK--PRLIEALKSKRIRDIACGSGHSAAIAS 3078

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
             GE++ WG G+ GRLGH        PKLV+ L G  V  V+CG  + QT ALT+ G +Y+
Sbjct: 3079 NGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYS 3138

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  + G   +G   S   + P  + D L+G+ V +V CG   +  ++  G+++T+G G 
Sbjct: 3139 WGDGDFGK--LGRGGSDGCYSPLPV-DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGD 3195

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +  LGHGN  +V +P  VE LRG KV  VA G  H  A+ D            G+++ WG
Sbjct: 3196 YFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD-----------AGQVYAWG 3244

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
            D D G+ G+        P+ V  L D    + +CG
Sbjct: 3245 DNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACG 3279



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT  G +Y+WG+ + G   +G   S S   P ++ + L    V+ +ACG  ++A +S++
Sbjct: 515 ALTTKGIVYSWGNGDGGR--LGHGDSFSCDEP-QVIEVLSDRTVTYIACGSTYSAAISST 571

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L T+G G++G LGHG   ++S P  V +L G  V  VACG   +  +       C +N
Sbjct: 572 GELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTL-------CVTN 624

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +  G +F+WGD D G+LG    +   LP  V +L+D + V+  CG   +  LT  G+VYT
Sbjct: 625 S--GIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYT 682

Query: 508 MGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            G   H +LG+   +  R   +VEG L+ + V+ +S G+ H+  +T    VY WG+N   
Sbjct: 683 WGKGDHYRLGHGNEEHVRFPKLVEG-LRNKKVRDLSVGNLHILAITEDQLVYGWGRNDAC 741

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCG 596
           Q+          PT    L  + V  +VCG
Sbjct: 742 QIDPSLGAVVSEPTLCPTLSGKSVIGLVCG 771



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 28/294 (9%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WGEG          DG +   N+   D   PKL+E+ +  ++ +I+ G  H+A ++ 
Sbjct: 4002 VYSWGEGD---------DGKLGHGNRITYDR--PKLIEALLGTEIVDIACGGHHSAAISS 4050

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
             G ++ WG+G+ GRLGH  + D   P +V  L G  V  V+CG  + QT  +T    +++
Sbjct: 4051 AGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWS 4110

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  ++G   +G   S    +P K+ ++L G+ V KV CG   +  ++ SG ++T+G G 
Sbjct: 4111 WGDGDYGK--LGRGGSDGCKVPMKI-ESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGD 4167

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +  LGHG   +V +P++V +L+G K+ S+A G  H  A  D            G+++TWG
Sbjct: 4168 YHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSD-----------KGEVYTWG 4216

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            D D+G+LG      +  P  V  L   +  + +CG   T+  +     +++ +A
Sbjct: 4217 DNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHSLPAA 4270



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/248 (33%), Positives = 126/248 (50%), Gaps = 24/248 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+++E      V  I+ G+ ++A ++  GE+  WG G  GRLGH +  D+S P +V  L+
Sbjct: 544 PQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALN 603

Query: 313 GINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           G  V  V+C  G+ QT  +T SG +++WG  ++G   +G   S    LP K+ D L    
Sbjct: 604 GHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGK--LGRGGSDGSKLP-KIVDKLLDQN 660

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V KV CG   +A ++  G+++T+G G    LGHGN ++V  PK VE LR  KV+ ++ G 
Sbjct: 661 VVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGN 720

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR----LGHVDGERKLLPTCVTRLVDFDF 486
            H  AI +  +           ++ WG  D  +    LG V  E  L PT   + V    
Sbjct: 721 LHILAITEDQL-----------VYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKSV---- 765

Query: 487 VQASCGRM 494
           +   CG M
Sbjct: 766 IGLVCGPM 773



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 35/325 (10%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG    G          S P   + ++ I V+ + C E     L+ SG++Y   + 
Sbjct: 434 EVLAWGNVHFG--------SGSMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMYYG 485

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
                      S + + P+ ++   D V +++    G+ H   ++T G ++++G+G  G 
Sbjct: 486 -----------SETQY-PQSVYGFADDVVQIASHPDGK-HYLALTTKGIVYSWGNGDGGR 532

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LGHG+  +  +P+ +E L    V  +ACG  ++AAI              G+L TWG   
Sbjct: 533 LGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST-----------GELLTWGRGS 581

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
            GRLGH   +   +PT VT L        +CG     T+ +T  G V++ G   +G+LG 
Sbjct: 582 YGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGR 641

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             +    +  +  KL ++ V  +  G    A LT+ G VYTWGK  + +LG G+ +    
Sbjct: 642 GGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRF 701

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  VE LR+++V  +  G+    AI
Sbjct: 702 PKLVEGLRNKKVRDLSVGNLHILAI 726



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 14/280 (5%)

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            T +   SG IY WGHN+ G   +G        LP    ++L  +R  ++A GE     V+
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQ--LGGLEGAKVKLPLPC-ESLSALRPIQLAGGEQTLFAVT 3943

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
              G+++  G G  G LG G + +V  P  +ES++ + +K VA         V+     C 
Sbjct: 3944 ADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVA---------VNSGGKHCL 3994

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            + +  G +++WG+ D G+LGH +      P  +  L+  + V  +CG   +  ++  G +
Sbjct: 3995 ALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWL 4054

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL--TSGGSVYTWGKN 563
            YT G   +G+LG+  + D+    V   L+   V  ++ GS     L  T   +V++WG  
Sbjct: 4055 YTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4114

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G S   + P  +E+L    V  V CGS  + A+
Sbjct: 4115 DYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVAL 4154



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 2/161 (1%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WG+ D GRLGH D      P  +  L D      +CG   +  ++  G++ T G 
Sbjct: 520 GIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGR 579

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQL 568
             +G+LG+    D SI  V   L    V  ++  SG      +T+ G V++WG    G+L
Sbjct: 580 GSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKL 639

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G G S   + P  V+ L D+ V  V CG   +AA+  H  +
Sbjct: 640 GRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEV 680



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 102/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   ESL  L+   +A G     A+          
Sbjct: 3893 SGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVT--------- 3943

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GK++  G    GRLG    +  ++PT +  +  V    V  + G    + L+  G 
Sbjct: 3944 --ADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGH 4001

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G    G+LG  N    DR   ++E  L  E V  I+ G +H A ++S G +YTWGK
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDRP-KLIEALLGTEIVD-IACGGHHSAAISSAGWLYTWGK 4059

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG GDS ++  PT V AL+  +V  V CGS     +C+
Sbjct: 4060 GRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCV 4102



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 17/163 (10%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG  S          P  ++    L V  +  GA+ +  +TK 
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYS----------PLPVDRLNGLGVVQVECGAQFSLALTKY 3185

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            GEV+ WG+G   RLGH  +  V  P LVE L G  V  V+ G     A+T +G++Y WG 
Sbjct: 3186 GEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGD 3245

Query: 341  NNHGADLVGERRSRSHWLPRK--LFDTLDGVRVSKVACGEWHT 381
            N+H     G++ + S  + RK  L   L+  +V++VACG  H+
Sbjct: 3246 NDH-----GQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHS 3283



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     +  + G      ++  GK+Y  G   
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGT 2983

Query: 513  HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG    N   + + I  +   + ++    + SG  H   LT  G V++WG+  +G+L
Sbjct: 2984 NGRLGLGDNNNVGEPKPIPFLSQYIIKKV--AVHSGGKHALALTQDGKVFSWGEGEDGKL 3041

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G G+    + P  +EAL+ +++  + CGS  +AAI
Sbjct: 3042 GHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAI 3076



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 39/245 (15%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA--KHAALV 277
           +++ WG G  G    G  D          D  +P ++ +     V +++ G+       V
Sbjct: 573 ELLTWGRGSYGRLGHGICD----------DISIPTVVTALNGHTVTHVACGSGDSQTLCV 622

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G VF WG+G  G+LG   +     PK+V+ L   NV  V CG   + ALT  GE+YT
Sbjct: 623 TNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYT 682

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--- 394
           WG  +H    +G         P KL + L   +V  ++ G  H   ++    ++ +G   
Sbjct: 683 WGKGDHYR--LGHGNEEHVRFP-KLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRND 739

Query: 395 ----DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP----------WHTAAIVDIM 440
               D + G +       VS+P    +L G  V  + CGP          W     V  +
Sbjct: 740 ACQIDPSLGAV-------VSEPTLCPTLSGKSVIGLVCGPMQSFAWSMSTWSVPQRVAFV 792

Query: 441 VDRCK 445
           VD C+
Sbjct: 793 VDVCE 797



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + LT  G VY+ G+   G+LG+  +       V   L +  V  I+ GS + A ++S G 
Sbjct: 514 LALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGE 573

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           + TWG+ + G+LG G   +   PT V AL    V  V CGS  +  +C+  S
Sbjct: 574 LLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNS 625


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 189/368 (51%), Gaps = 16/368 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG      T  D  +P  +E    L V  I+ G+ H  ++T++ +V+ WG G DGRLGH 
Sbjct: 16  DGQCGNGSTN-DQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHA 74

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
            N     P LV  L+G +++ V+CG + T A++ +G ++TWG   +G   +G      H 
Sbjct: 75  DNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK--LGHGNEVGHP 132

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVE 416
            P ++ +   G  V ++ACG  HTA +   G+++ +GD   GV G G   ++   PK++E
Sbjct: 133 APCRV-EAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLE 191

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           +L+G+K+  +A   +HTAAI              G L++WG+   GRLG  + + ++ P 
Sbjct: 192 ALKGVKITQIAACGFHTAAITQ-----------DGALWSWGEGKFGRLGQGNEKNQVTPC 240

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           CV  L      Q +CG   +  +T  G V T G   HGQLG+    +R++  +   L+  
Sbjct: 241 CVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGA 300

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            +  ++ G  H   L+  G V+T+G   +G+LG G + +   P  VE+L + +V  V   
Sbjct: 301 GIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASY 360

Query: 597 SSITAAIC 604
           +  T A+C
Sbjct: 361 NEHTVALC 368



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 162/323 (50%), Gaps = 17/323 (5%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           ++ WG G+DG+ G+    D   P  VE L  + V  ++CG   T  LT+  ++++WG  +
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G   +   ++P  L   L G  + +V CG +HTA +S +G L+T+G G +G LG
Sbjct: 68  DGR--LGHADNHWKYVPH-LVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           HGN      P  VE+  G +V+ +ACG  HTAA++            GG+++ WGD + G
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALL-----------AGGEVYCWGDRENG 173

Query: 463 RLGHVD-GERKLLPTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
             G  +  E + LP  +  L      Q A+CG   T  +T  G +++ G    G+LG   
Sbjct: 174 VCGIGEAAEHQYLPKKLEALKGVKITQIAACG-FHTAAITQDGALWSWGEGKFGRLGQGN 232

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            K++        L+   VK ++ G +H A +T  G V T+G   +GQLG GD   R  P 
Sbjct: 233 EKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPC 292

Query: 581 FVEALRDRQVESVVCGSSITAAI 603
            V+AL    +  V CG S T  +
Sbjct: 293 LVKALEGAGIVQVTCGWSHTVTL 315



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 13/166 (7%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGEG  G          + Q   + + + P  +E    + V+ ++ G  H+A VT++G+V
Sbjct: 220 WGEGKFG---------RLGQGNEK-NQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDV 269

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
             +G G+ G+LGH    + + P LV+ L G  +  V+CG   T  L++ G+++T+G+ +H
Sbjct: 270 LTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           G   +G   +    LP KL ++L  ++V+KVA    HT  +  + Q
Sbjct: 330 GK--LGHGANAKSALP-KLVESLANMKVAKVASYNEHTVALCHAEQ 372



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 29/53 (54%)

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           +Y+WG+  +GQ G G + ++E P  VE L+   V  + CGS  T  +   K +
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDV 60


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  186 bits (471), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 192/365 (52%), Gaps = 18/365 (4%)

Query: 266  NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GE 323
            +I+ G+K   +V++EG+++  GEG +GRLG   + ++  PKL+  LS   ++ V+   G 
Sbjct: 2988 HIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGG 3047

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
                ALT+ G++++WG    G   +G     +   PR L ++L   R+  +ACG  H+A 
Sbjct: 3048 KHALALTQDGKVFSWGEGEDGK--LGHGNCTTLDKPR-LIESLKSKRIRDIACGSGHSAA 3104

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            ++++G+L+T+G G +G LGHG+     +PK V++L G +V  VACG    A  + +  D 
Sbjct: 3105 IASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGS-RDAQTMSLTADG 3163

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
            C        ++TWGD D G+LG    +    P  V RL     VQ  CG   ++ LT  G
Sbjct: 3164 C--------VYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYG 3215

Query: 504  KVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            +V+T G   + +LG+      R  T+VEG L+ + +  ++ G+ H   +T  G VY WG 
Sbjct: 3216 EVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3274

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS--QC 620
            N +GQ G G +     P+ V  L D ++  V CGSS + A  L    + G+Q   +    
Sbjct: 3275 NDHGQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTA 3334

Query: 621  RMPFG 625
            R P G
Sbjct: 3335 RDPLG 3339



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 212/446 (47%), Gaps = 43/446 (9%)

Query: 191  DTRCPKN-ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVD 249
            DT C K+ E+H +    +   L++  +   +     +  L  D  GA+ G    ++ Q+ 
Sbjct: 3892 DTECTKDHENHIIFKQEHDEQLLQWLNRRPE-----DWTLSWDGSGAIYGWGHNHRGQLG 3946

Query: 250  AL------LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
             L      LP   ES   L    ++ G +    VT +G+V+  G G  GRLG      V 
Sbjct: 3947 GLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDSVM 4006

Query: 304  CPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
             P L+E +  + ++  +V+ G     AL+  G +Y+WG  + G    G R S       K
Sbjct: 4007 VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDR---PK 4063

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            L + L G+ +  +ACG  H+A ++++G L+T+G G +G LGHG+  +  +PK VE+L+  
Sbjct: 4064 LVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 4123

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            KV  VACG      +       C ++     +++WGD D G+LG    +   +P  +  L
Sbjct: 4124 KVIDVACGSGDAQTL-------CVTD--DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL 4174

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEF 537
                 ++  CG   +V LT  G VYT G   + +LG+       + R +  ++GK     
Sbjct: 4175 AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---- 4230

Query: 538  VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
            +  I++GS H    +  G V+TWG N  GQLG G +   + P  V AL+ +++  V CGS
Sbjct: 4231 IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGS 4290

Query: 598  SITAAICLHKSISVGDQSSCSQCRMP 623
            + T A    K+         +Q RMP
Sbjct: 4291 AHTLAWSTAKA---------TQSRMP 4307



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 169/340 (49%), Gaps = 31/340 (9%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            PKL+       ++ +++  G KHA  +T++G+VF WGEG+DG+LGH     +  P+L+E 
Sbjct: 3027 PKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIES 3086

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            L    ++ ++CG   + A+  +GE+YTWG   +G   +G   + +   P KL   L G R
Sbjct: 3087 LKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR--LGHGDTATQMKP-KLVQALSGQR 3143

Query: 371  VSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            V +VACG  +  T  ++  G ++T+GDG FG LG G       P  V+ L GL V  V C
Sbjct: 3144 VVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVEC 3203

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G   + A+              G+++TWG  D  RLGH +      PT V  L     V 
Sbjct: 3204 GAQFSLALTKY-----------GEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVH 3252

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             + G +  + +T  G+VY  G   HGQ GN     +R  ++V  +L +  +  +S GS H
Sbjct: 3253 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVH-ELDDTRMNRVSCGSSH 3311

Query: 548  ------VAVLTSGGS---VYTWGKNANGQ--LGLGDSQER 576
                  V   T+G      +   ++  GQ  LGLG++ E+
Sbjct: 3312 SIAWILVDQPTNGNQEPVTFQTARDPLGQMCLGLGNAAEQ 3351



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 142/278 (51%), Gaps = 12/278 (4%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT+ G +Y+WG+ + G   +G   + SH  P KL +TL    +  +ACG  ++A +S S
Sbjct: 523 ALTQDGCVYSWGNGDGGR--LGHGDNISHDEP-KLIETLLEKNIIFIACGSTYSAALSAS 579

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L+T+G G +G LGHG+  +V+ P  V +L+G  V  VACG   +  +       C + 
Sbjct: 580 GELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTL-------CVTA 632

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +  G +F+WGD D G+LG    +    P  V +L+D + V+  CG   +  LT  G+VYT
Sbjct: 633 S--GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYT 690

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G     +LG+   +      +   L+++ +K +S G  H+  LT    VY WG+N  GQ
Sbjct: 691 WGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQ 750

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +          P+    L  + V  +  G + + A C+
Sbjct: 751 IDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAWCM 788



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 152/323 (47%), Gaps = 18/323 (5%)

Query: 279  KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
            ++  V+ WG     +LG      +  P   E LS +    ++ G      +++ G++Y  
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3008

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDG 396
            G   +G   +G+  +       KL   L    + KVA   G  H   ++  G++F++G+G
Sbjct: 3009 GEGTNGRLGLGDDYNMCE---PKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 3065

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              G LGHGN   + +P+ +ESL+  +++ +ACG  H+AAI           A  G+L+TW
Sbjct: 3066 EDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAI-----------ASNGELYTW 3114

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHG 514
            G  + GRLGH D   ++ P  V  L     VQ +CG     T+ LT  G VYT G    G
Sbjct: 3115 GLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFG 3174

Query: 515  QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
            +LG   +      ++  +L    V  +  G+     LT  G V+TWGK    +LG G+  
Sbjct: 3175 KLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3234

Query: 575  ERETPTFVEALRDRQVESVVCGS 597
                PT VE LR +++  V  G+
Sbjct: 3235 HVRKPTLVEGLRGKKIVHVAVGA 3257



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 122/247 (49%), Gaps = 16/247 (6%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           KH   +T++G V+ WG G  GRLGH  N+    PKL+E L   N+  ++CG   + AL+ 
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSA 578

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQ 389
           SGE+YTWG  N+G   +G   +    +P  L  TL G  V  VAC  G+  T  V+ SG 
Sbjct: 579 SGELYTWGRGNYGR--LGHGSNDDVTVP-TLVTTLKGHMVVHVACGSGDSQTLCVTASGI 635

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           +F++GDG +G LG G       PK V+ L  + V  V CG   +AA+             
Sbjct: 636 VFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAAL-----------TA 684

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G+++TWG  D  RLGH + E    P  +  L D      S G    + LT    VY  G
Sbjct: 685 RGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWG 744

Query: 510 SAVHGQL 516
              +GQ+
Sbjct: 745 RNDYGQI 751



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 30/268 (11%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G  GG +G     ++S ++       PKL+E+ +  ++  I+ G+ ++A ++  
Sbjct: 530 VYSWGNGD-GGRLGHG--DNISHDE-------PKLIETLLEKNIIFIACGSTYSAALSAS 579

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYTW 338
           GE++ WG G  GRLGH  N DV+ P LV  L G  V  V+C  G+ QT  +T SG +++W
Sbjct: 580 GELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSW 639

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  ++G   +G   S     P K+ D L  + V +V CG   +A ++  G+++T+G G  
Sbjct: 640 GDGDYGK--LGRGGSDGSKTP-KIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDA 696

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             LGHGN ++V  PK +ESLR  K+K ++ G  H  A+ +              ++ WG 
Sbjct: 697 YRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQF-----------VYGWGR 745

Query: 459 ADKGR----LGHVDGERKLLPTCVTRLV 482
            D G+    LG V  E  L PT  ++ V
Sbjct: 746 NDYGQIDPTLGPVVSEPSLCPTLSSKNV 773



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + LT  G VY+ G+   G+LG+          +   L E+ +  I+ GS + A L++ G 
Sbjct: 522 LALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGE 581

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           +YTWG+   G+LG G + +   PT V  L+   V  V CGS  +  +C+  S
Sbjct: 582 LYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           S G +++A LT  G VY+WG    G+LG GD+   + P  +E L ++ +  + CGS+ +A
Sbjct: 516 SDGKHYLA-LTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSA 574

Query: 602 AI 603
           A+
Sbjct: 575 AL 576



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+ES     ++++S+G  H   +T++  V+ WG    G++   +   VS P L   LS
Sbjct: 710 PKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLS 769

Query: 313 GINVQSVSCGEFQTCA 328
             NV  ++ G  Q+ A
Sbjct: 770 SKNVIGLASGPTQSFA 785


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 199/423 (47%), Gaps = 28/423 (6%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+++E+ +  DV+ I+ GA H A     G ++ WG G+ GRLGH    D   P  V
Sbjct: 165 DHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAGQ-GRLGHDHERDRFIPLEV 223

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L G  V   +CG   T A+T +G +YTWG    G    G+  + S   PR++      
Sbjct: 224 SALGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACS--TPREVASLALQ 281

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           V V  +        +   SG ++ +G    G LG G+      P  +  L    +  +AC
Sbjct: 282 VIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRTPRMSPALLADLS--SISRIAC 339

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
               +   V     R ++  +  +++TWGD   G+LGH   E +L+P  V  L   + + 
Sbjct: 340 TYLQSNLPVK---RRHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVMALEQVNIIA 396

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            + G+  T  LT  G+V+T G    GQLG+  A  R            + K +      +
Sbjct: 397 VAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILR------------YCKPLL-----I 439

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVCGSSITAAICLHK 607
             L   G +Y WG +  G LG G ++E    P  VEA+  ++V++V CG    AA+ LH 
Sbjct: 440 ESLKDSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAALVLHA 499

Query: 608 SISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDT 667
            I   + + C  C+ PF   R++H+C NCG  FC +CS+K+I  A L      P RVCD 
Sbjct: 500 WIPDEESTLCMACKAPFTMIRRRHHCRNCGGLFCGSCSSKRI--ALLDAGFASPVRVCDR 557

Query: 668 CYN 670
           C++
Sbjct: 558 CHS 560



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 31/171 (18%)

Query: 215 KDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA 274
           + ++  +  WG+G   G +G         + T+ + L+P+ + +   +++  ++ G  H 
Sbjct: 355 RQLMMRMWTWGDGA-SGQLG---------HGTEEEELVPRQVMALEQVNIIAVAAGKAHT 404

Query: 275 ALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSG 333
           A +T +GEV+ WG+G DG+LGH   +   C P L+E                  +L  SG
Sbjct: 405 AALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLLIE------------------SLKDSG 446

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            +Y WG++  GA L G        +PR + + ++G +V  VACG+ H A +
Sbjct: 447 HLYAWGNSRRGA-LGGGLAEEVVSVPRAV-EAMEGKKVKAVACGKRHCAAL 495



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           D   L W S +K      +++ +I +GQ T  F+   +P+ +  SFSIIY  G+++LDL+
Sbjct: 43  DLTTLSWTSPKKTSNQ--STIDEIRIGQNTPVFKKNRKPEYENVSFSIIY--GDKTLDLV 98

Query: 62  CKDKVQAESWFLGLR 76
            K+  + + W  GL+
Sbjct: 99  SKNVRERDIWVQGLK 113


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 197/379 (51%), Gaps = 18/379 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E+   L   +I+ G+K   +V++EG+++  GEG +GRLG   + ++  PK +  L
Sbjct: 3035 LPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFL 3094

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G++++WG    G   +G     S   P KL + L   
Sbjct: 3095 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK--LGHGNCISLDKP-KLIEVLKSK 3151

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A ++++G+L+T+G G +G LGHG+    ++PK V++L G +V  VACG
Sbjct: 3152 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACG 3211

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  V RL +   +Q 
Sbjct: 3212 S-RDAQTMALTTD--------GYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQV 3262

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + +  ++ G+ H 
Sbjct: 3263 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHC 3321

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +     P+ V  L D +V  V CGSS + A  L   
Sbjct: 3322 LAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQ 3381

Query: 609  ISVGDQSSCS--QCRMPFG 625
             S G+Q   +    R P G
Sbjct: 3382 PSNGNQDPVTFPTVRDPLG 3400



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 197/407 (48%), Gaps = 37/407 (9%)

Query: 229  LGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            L  D  GA+ G    ++ Q+  L      LP   ES   L    ++ G +    VT +G+
Sbjct: 3988 LSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGK 4047

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGH 340
            ++  G G  GRLG      V  P L+E +  + ++  +VS G     AL+  G +Y+WG 
Sbjct: 4048 IYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGE 4107

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             + G   +G     S+  P KL + L GV +  +ACG  H+A ++++G L+T+G G +G 
Sbjct: 4108 GDDGK--LGHGNKVSYDRP-KLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4164

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHG+  +  +PK VE+L+  KV  VACG      +       C ++     +++WGD D
Sbjct: 4165 LGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWSWGDGD 4215

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
             G+LG    +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+  
Sbjct: 4216 YGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4275

Query: 521  A----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
                 + R +  ++GK     +  I++GS H    +  G V+TWG N  GQLG G +   
Sbjct: 4276 DDHVRRPRKVAALQGKK----IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSAL 4331

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
              P  V AL+ +++  V CGS+ T A    K+         +Q RMP
Sbjct: 4332 HRPRLVHALQGKKITRVACGSAHTLAWSTAKA---------TQSRMP 4369



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 12/278 (4%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT+ G +Y+WG+ + G   +G   + S+  P KL + L    +  +ACG  ++A +S +
Sbjct: 582 ALTQDGCVYSWGNGDGGR--LGHGDTISYDEP-KLIEALLEKNIIFIACGSTYSAALSAN 638

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L+T+G G +G LGHGN  +V  P  V +L+G  V  VACG   +  +       C + 
Sbjct: 639 GELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTL-------CVTA 691

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +  G +F+WGD D G+LG    +    P  V +L+D + V+  CG   +  LT  G+VYT
Sbjct: 692 S--GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYT 749

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G     +LG+   +      V   L++  VK +S G+ H+  LT    VY WG+N  GQ
Sbjct: 750 WGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQ 809

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +          PT    L  + V  +  G + + A C+
Sbjct: 810 IDPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFAWCM 847



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 128/276 (46%), Gaps = 16/276 (5%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
            KH   +T++G V+ WG G  GRLGH   +    PKL+E L   N+  ++CG   + AL+
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALS 636

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSG 388
            +GE+YTWG  N+G   +G         P  L  TL G  V  VAC  G+  T  V+ SG
Sbjct: 637 ANGELYTWGRGNYGR--LGHGNFDDVMTP-TLVTTLKGHTVVHVACGSGDSQTLCVTASG 693

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            +F++GDG +G LG G       PK V+ L  + V  V CG   +AA+            
Sbjct: 694 IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAAL-----------T 742

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+++TWG  D  RLGH   E    P  +  L D      S G    + LT    VY  
Sbjct: 743 AHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGW 802

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
           G   +GQ+        S   +   L  + V G++SG
Sbjct: 803 GRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASG 838



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 125/236 (52%), Gaps = 20/236 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+E+ +  ++  I+ G+ ++A ++  GE++ WG G  GRLGH    DV  P LV  L 
Sbjct: 611 PKLIEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLK 670

Query: 313 GINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           G  V  V+C  G+ QT  +T SG +++WG  ++G   +G   +     P K+ D L  + 
Sbjct: 671 GHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGK--LGRGGTDGSKTP-KIVDKLLDIN 727

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V KV CG   +A ++  G+++T+G G    LGHG+ ++V  PK +ESLR  KVK ++ G 
Sbjct: 728 VVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGT 787

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR----LGHVDGERKLLPTCVTRLV 482
            H  A+ +              ++ WG  D G+    LG +  E  L PT  ++ V
Sbjct: 788 THILALTEDQF-----------VYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTV 832



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 120/276 (43%), Gaps = 81/276 (29%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WGEG          DG +   NK   D   PKL+E  + +++ +I+ G  H+A +T 
Sbjct: 4102 VYSWGEGD---------DGKLGHGNKVSYDR--PKLIEDLLGVEIVDIACGGHHSAAITS 4150

Query: 280  EGEVFCWGEGKDGRLGH------------------KVNMDVSC----------------- 304
             G ++ WG+G+ GRLGH                  KV +DV+C                 
Sbjct: 4151 AGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKV-IDVACGSGDAQTLCVTDDDNVW 4209

Query: 305  --------------------PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-- 342
                                P  ++ L+G+ V  V CG   + ALT+SG +YTWG  +  
Sbjct: 4210 SWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH 4269

Query: 343  ---HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
               HG D    R       PRK+   L G ++  +A G  H    S  G++FT+GD   G
Sbjct: 4270 RLGHGTDDHVRR-------PRKV-AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEG 4321

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
             LG G    + +P+ V +L+G K+  VACG  HT A
Sbjct: 4322 QLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 4357



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 2/161 (1%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WG+ D GRLGH D      P  +  L++ + +  +CG   +  L+  G++YT G 
Sbjct: 587 GCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSANGELYTWGR 646

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQL 568
             +G+LG+    D     +   LK   V  ++  SG      +T+ G V++WG    G+L
Sbjct: 647 GNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 706

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G G +   +TP  V+ L D  V  V CGS  +AA+  H  +
Sbjct: 707 GRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEV 747



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DGS +          PK+++  + ++V  +  G++ +A +T  
Sbjct: 695 VFSWGDGDYGKLGRGGTDGSKT----------PKIVDKLLDINVVKVFCGSQFSAALTAH 744

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+ WG+G   RLGH     V  PK++E L    V+ +S G     ALT+   +Y WG 
Sbjct: 745 GEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGR 804

Query: 341 NNHG 344
           N++G
Sbjct: 805 NDYG 808



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     +  + G      ++  GK+Y  G   
Sbjct: 3014 VYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGT 3073

Query: 513  HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG    N   + ++I  +   + ++    + SG  H   LT  G V++WG+  +G+L
Sbjct: 3074 NGRLGLGDDNNMCEPKAIPFLSQFVIKKV--AVHSGGKHALALTQDGKVFSWGEGEDGKL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G G+    + P  +E L+ +++  + CGS  +AAI
Sbjct: 3132 GHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAI 3166



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 25/223 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA--KHAALV 277
           ++  WG G  G    G  D          D + P L+ +     V +++ G+       V
Sbjct: 640 ELYTWGRGNYGRLGHGNFD----------DVMTPTLVTTLKGHTVVHVACGSGDSQTLCV 689

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G VF WG+G  G+LG         PK+V+ L  INV  V CG   + ALT  GE+YT
Sbjct: 690 TASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYT 749

Query: 338 WGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           WG  +     HG        S  H    K+ ++L   +V  ++ G  H   ++    ++ 
Sbjct: 750 WGKGDAYRLGHG--------SEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYG 801

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           +G   +G +       +S+P    +L    V  +A GP  + A
Sbjct: 802 WGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFA 844



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 8/116 (6%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG----ISSGSYHVAVLT 552
           + LT  G VY+ G+   G+LG+      +I+  E KL E  ++     I+ GS + A L+
Sbjct: 581 LALTQDGCVYSWGNGDGGRLGHGD----TISYDEPKLIEALLEKNIIFIACGSTYSAALS 636

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           + G +YTWG+   G+LG G+  +  TPT V  L+   V  V CGS  +  +C+  S
Sbjct: 637 ANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTAS 692



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   LT  G VY+WG    G+LG GD+   + P  +EAL ++ +  + CGS+ +AA+
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAAL 635


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 195/379 (51%), Gaps = 18/379 (4%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   E    L   +I+ G+K   +V++EG+++  GEG +GRLG   + +V  PK +  L
Sbjct: 2612 LPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFL 2671

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G++++WG    G   +G     S   P KL + L   
Sbjct: 2672 SQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK--LGHGNCISLDKP-KLIEILKSK 2728

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  +ACG  H+A ++++G+L+T+G G +G LGHG+    ++PK V++L G +V  VACG
Sbjct: 2729 RIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACG 2788

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D C        +++WGD D G+LG    +    P  V RL     +Q 
Sbjct: 2789 S-RDAQTMALTTDGC--------VYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQV 2839

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + +  ++ G+ H 
Sbjct: 2840 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHC 2898

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +     P+ V  L D +V  V CGSS + A  L   
Sbjct: 2899 LAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQ 2958

Query: 609  ISVGDQSSCS--QCRMPFG 625
             S G+Q   +    R P G
Sbjct: 2959 PSNGNQDPVTFPTVRDPLG 2977



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 12/278 (4%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT+ G +Y+WG+ + G   +G   + S+  P KL ++L    +  +ACG  ++A +S S
Sbjct: 161 ALTQDGCVYSWGNGDGGR--LGHGDTVSYDEP-KLIESLLDKNIVFIACGSTYSAALSAS 217

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L+T+G G +G LGHGN  +V  P  V +L+G  V  VACG   +  +       C + 
Sbjct: 218 GELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTL-------CVTA 270

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +  G +F+WGD D G+LG    +    P  V +L+D + V+  CG   +  LT  G+VYT
Sbjct: 271 S--GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYT 328

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G     +LG+   +      V   L+++ +K +S G+ H+  LT    VY WG+N  GQ
Sbjct: 329 WGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQ 388

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +          PT    L  + V  +  G + + A C+
Sbjct: 389 IDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFAWCM 426



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 128/276 (46%), Gaps = 16/276 (5%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
            KH   +T++G V+ WG G  GRLGH   +    PKL+E L   N+  ++CG   + AL+
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALS 215

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSG 388
            SGE+YTWG  N+G   +G         P  L  TL G  V  VAC  G+  T  V+ SG
Sbjct: 216 ASGELYTWGRGNYGR--LGHGNFDDVLTP-TLVTTLKGHTVVHVACGSGDSQTLCVTASG 272

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            +F++GDG +G LG G       PK V+ L  + V  V CG   +AA+            
Sbjct: 273 IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAAL-----------T 321

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+++TWG  D  RLGH   E    P  +  L D      S G    + LT    VY  
Sbjct: 322 AHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGW 381

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
           G   +GQ+        S   +   L  + V G++SG
Sbjct: 382 GRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASG 417



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 138/268 (51%), Gaps = 30/268 (11%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G  GG +G     +VS ++       PKL+ES +  ++  I+ G+ ++A ++  
Sbjct: 168 VYSWGNGD-GGRLGHG--DTVSYDE-------PKLIESLLDKNIVFIACGSTYSAALSAS 217

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYTW 338
           GE++ WG G  GRLGH    DV  P LV  L G  V  V+C  G+ QT  +T SG +++W
Sbjct: 218 GELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSW 277

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  ++G   +G   +     P K+ D L  + V KV CG   +A ++  G+++T+G G  
Sbjct: 278 GDGDYGK--LGRGGTDGSKTP-KIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDA 334

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             LGHG+ ++V  PK +ESLR  K+K ++ G  H  A+ +              ++ WG 
Sbjct: 335 YRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQF-----------VYGWGR 383

Query: 459 ADKGR----LGHVDGERKLLPTCVTRLV 482
            D G+    LG V  E  L PT  ++ V
Sbjct: 384 NDYGQIDPTLGPVVSEPTLCPTLSSKTV 411



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WG+ D GRLGH D      P  +  L+D + V  +CG   +  L+  G++YT G 
Sbjct: 166 GCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSASGELYTWGR 225

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQL 568
             +G+LG+    D     +   LK   V  ++  SG      +T+ G V++WG    G+L
Sbjct: 226 GNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 285

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G G +   +TP  V+ L D  V  V CG   +AA+  H  +
Sbjct: 286 GRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEV 326



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 25/223 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA--KHAALV 277
           ++  WG G  G    G  D          D L P L+ +     V +++ G+       V
Sbjct: 219 ELYTWGRGNYGRLGHGNFD----------DVLTPTLVTTLKGHTVVHVACGSGDSQTLCV 268

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G VF WG+G  G+LG         PK+V+ L  INV  V CG   + ALT  GE+YT
Sbjct: 269 TASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYT 328

Query: 338 WGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           WG  +     HG        S  H    K+ ++L   ++  ++ G  H   ++    ++ 
Sbjct: 329 WGKGDAYRLGHG--------SEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYG 380

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           +G   +G +       VS+P    +L    V  +A GP  + A
Sbjct: 381 WGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFA 423



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++ WG  DK +LG + G +  LP     L     +  + G      ++  GK+Y  G   
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGT 2650

Query: 513  HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG    N   + ++I  +   + ++    + SG  H   LT  G V++WG+  +G+L
Sbjct: 2651 NGRLGLGDDNNVCEPKAIPFLSQFVIKKV--AVHSGGKHALALTQDGKVFSWGEGEDGKL 2708

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G G+    + P  +E L+ +++  + CGS  +AAI
Sbjct: 2709 GHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAI 2743



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG----ISSGSYHVAVLT 552
           + LT  G VY+ G+   G+LG+      +++  E KL E  +      I+ GS + A L+
Sbjct: 160 LALTQDGCVYSWGNGDGGRLGH----GDTVSYDEPKLIESLLDKNIVFIACGSTYSAALS 215

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           + G +YTWG+   G+LG G+  +  TPT V  L+   V  V CGS  +  +C+  S
Sbjct: 216 ASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTAS 271



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   LT  G VY+WG    G+LG GD+   + P  +E+L D+ +  + CGS+ +AA+
Sbjct: 158 HYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAAL 214


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 199/402 (49%), Gaps = 23/402 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP   ES   L   +I+ G+K   +V++EG+++  GEG +GRLG   + +   PK +  L
Sbjct: 2932 LPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFL 2991

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            S   ++ V+   G     ALT+ G +++WG    G   +G     S   PR L ++L   
Sbjct: 2992 SQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGK--LGHGNCSSLDKPR-LIESLKSK 3048

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R+  VACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+SL G +V  VACG
Sbjct: 3049 RIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACG 3108

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D        G +++WGD D G+LG    +    P  V RL     VQ 
Sbjct: 3109 S-RDAQTMALTAD--------GSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQI 3159

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHV 548
             CG   ++ LT  G+V+T G   + +LG+      R  T+VEG L+ + V  ++ G+ H 
Sbjct: 3160 ECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKVIHVAVGALHC 3218

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              +T  G VY WG N +GQ G G +   + P+ V  L D +V  V CGSS + A  L   
Sbjct: 3219 LAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3278

Query: 609  ISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKII 650
             +  +Q        P  F   K       L   +   T+ I+
Sbjct: 3279 PAANNQE-------PVTFPTAKDPLGQASLRLKNILDTESIV 3313



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 196/407 (48%), Gaps = 37/407 (9%)

Query: 229  LGGDIGGAVDGSVSQNKTQVDAL------LPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            L  D  GA+ G    ++ Q+  L      LP L ES   L    ++ G +    VT +G+
Sbjct: 3890 LSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGK 3949

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGH 340
            V+  G G  GRLG      V  P L+E +  + V+  +V+ G     AL+  G +Y+WG 
Sbjct: 3950 VYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGE 4009

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             + G    G R S       KL + L G  +  VACG  H+A ++++G L+T+G G +G 
Sbjct: 4010 GDDGKLGHGNRLSYDR---PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGR 4066

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHG+ ++   PK VE+L+  KV  VACG      +       C ++     +++WGD D
Sbjct: 4067 LGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTL-------CVTD--DDNVWSWGDGD 4117

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
             G+LG    +   +P  +  L     ++  CG   +V LT  G +YT G   + +LG+  
Sbjct: 4118 YGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGT 4177

Query: 521  A----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
                 + R +  ++GK     +  I++GS H    +  G V+TWG N  GQLG G +   
Sbjct: 4178 DDHVRRPRKVAALQGKK----IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCAL 4233

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
            + P  V AL+ +++  V CGS+ T A    K+         +Q RMP
Sbjct: 4234 QRPRLVHALQGKKITRVACGSAHTLAWSTMKA---------TQSRMP 4271



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 156/325 (48%), Gaps = 24/325 (7%)

Query: 225  GEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
            GEG   G +G   DG+  + K       P    S  ++    +  G KHA  +T++G VF
Sbjct: 2967 GEGT-NGRLGLGDDGNACEPK-------PIPFLSQYVIKKVAVHSGGKHALALTQDGRVF 3018

Query: 285  CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
             WGEG+DG+LGH     +  P+L+E L    ++ V+CG   + A+T SGE+YTWG   +G
Sbjct: 3019 SWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYG 3078

Query: 345  ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLG 402
                G+  ++   L  KL  +L G RV +VACG  +  T  ++  G ++++GDG FG LG
Sbjct: 3079 RLGHGDTNTQ---LKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLG 3135

Query: 403  HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
             G       P  V+ L GL V  + CG   + A+              G+++TWG  D  
Sbjct: 3136 RGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKY-----------GEVWTWGKGDYF 3184

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
            RLGH +      PT V  L     +  + G +  + +T  G+VY  G   HGQ GN    
Sbjct: 3185 RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3244

Query: 523  DRSITVVEGKLKEEFVKGISSGSYH 547
                  +  +L +  V  +S GS H
Sbjct: 3245 VNKKPSLVHELDDARVNRVSCGSSH 3269



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 150/319 (47%), Gaps = 18/319 (5%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WG     +LG      +  P   E LS +    ++ G      +++ G++Y  G   
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2970

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
            +G   +G+  +     P      L    + KVA   G  H   ++  G++F++G+G  G 
Sbjct: 2971 NGRLGLGDDGNACEPKP---IPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGK 3027

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHGN  ++ +P+ +ESL+  +++ VACG  H+AAI              G+L+TWG  +
Sbjct: 3028 LGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITS-----------SGELYTWGLGE 3076

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
             GRLGH D   +L P  V  LV    +Q +CG     T+ LT  G VY+ G    G+LG 
Sbjct: 3077 YGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGR 3136

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +      ++  +L    V  I  G+     LT  G V+TWGK    +LG G+      
Sbjct: 3137 GGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3196

Query: 579  PTFVEALRDRQVESVVCGS 597
            PT VE LR ++V  V  G+
Sbjct: 3197 PTLVEGLRGKKVIHVAVGA 3215



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 12/277 (4%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT+   +Y+WG+ + G    G+R   + +   KL ++L    ++ +ACG  ++A +S++
Sbjct: 520 ALTEDSSVYSWGNGDGGRLGHGDR---TWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L+T+G G +G LGHGN  +V  P  V +L G  +  VACG   +  +       C + 
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTL-------CVTA 629

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +  G +F+WGD D G+LG         P  V +L+D +  +  CG   +  LT  G+VYT
Sbjct: 630 S--GIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYT 687

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G     +LG+   +          LK + VK +  GS HV  LT    VY WG+N  GQ
Sbjct: 688 WGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQ 747

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           +          PT    L  + V  +VCG + + A C
Sbjct: 748 IDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWC 784



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 16/247 (6%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           KH   +T++  V+ WG G  GRLGH        PKL+E L   N+  ++CG   + AL+ 
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSS 575

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQ 389
           +GE+YTWG  N+G   +G   S    +P  L   L+G  +  VAC  G+  T  V+ SG 
Sbjct: 576 NGELYTWGRGNYGR--LGHGNSDDVMVP-TLVSALNGHMIVYVACGSGDSQTLCVTASGI 632

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           +F++GDG +G LG G       PK V+ L  + V  V CG   +AA+             
Sbjct: 633 VFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY---------- 682

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G+++TWG  +  RLGH + E    P  +  L      +   G +  + LT    VY  G
Sbjct: 683 -GEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWG 741

Query: 510 SAVHGQL 516
              +GQ+
Sbjct: 742 RNDYGQI 748



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 124/230 (53%), Gaps = 20/230 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+ES V  ++  I+ G+ ++A ++  GE++ WG G  GRLGH  + DV  P LV  L+
Sbjct: 549 PKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALN 608

Query: 313 GINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           G  +  V+C  G+ QT  +T SG +++WG  ++G   +G         P K+ D L  + 
Sbjct: 609 GHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGK--LGRGGCNGSKTP-KIVDKLLDIN 665

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V+KV CG   +A ++  G+++T+G G    LGHGN ++V  PK +E+L+  KVK +  G 
Sbjct: 666 VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGS 725

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR----LGHVDGERKLLPT 476
            H  A+ +  +           ++ WG  D G+    LG +  E  L PT
Sbjct: 726 LHVLALTEDQL-----------VYGWGRNDYGQIDPALGTIVSEPTLCPT 764



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 37/321 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG  K G  G       S P   + ++ + ++ + C E     L+ SG +Y   + 
Sbjct: 437 EVLAWGSVKFGGTG-------SSPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYG 489

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                      S + + P++++   D   V+ +A    G+ + A+   S  ++++G+G  
Sbjct: 490 -----------SETQY-PQRVYGFSDKF-VAMIASHPDGKHYLALTEDS-SVYSWGNGDG 535

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LGHG+     +PK +ESL    +  +ACG  ++AA+         SN   G+L+TWG 
Sbjct: 536 GRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL--------SSN---GELYTWGR 584

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
            + GRLGH + +  ++PT V+ L     V  +CG     T+ +T  G V++ G   +G+L
Sbjct: 585 GNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKL 644

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G           +  KL +  V  +  G    A LT+ G VYTWGK    +LG G+ +  
Sbjct: 645 GRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV 704

Query: 577 ETPTFVEALRDRQVESVVCGS 597
             P  +EAL+ ++V+ +  GS
Sbjct: 705 RYPKAIEALKTKKVKELCVGS 725



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 25/250 (10%)

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           D +  + + ++ C E    I+STSG ++    G+              P+ V       V
Sbjct: 457 DAIAELGIKQLCCTERALMILSTSGNVYMMYYGS----------ETQYPQRVYGFSDKFV 506

Query: 424 KSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
             +A  P   H  A+ +              +++WG+ D GRLGH D      P  +  L
Sbjct: 507 AMIASHPDGKHYLALTE-----------DSSVYSWGNGDGGRLGHGDRTWYEEPKLIESL 555

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
           VD +    +CG   +  L+  G++YT G   +G+LG+  + D  +  +   L    +  +
Sbjct: 556 VDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYV 615

Query: 542 S--SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
           +  SG      +T+ G V++WG    G+LG G     +TP  V+ L D  V  V CG   
Sbjct: 616 ACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQF 675

Query: 600 TAAICLHKSI 609
           +AA+  +  +
Sbjct: 676 SAALTAYGEV 685



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 10/124 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G    D G    G  + +KT      PK+++  + ++V  +  G + +A +T  
Sbjct: 633 VFSWGDG----DYGKLGRGGCNGSKT------PKIVDKLLDINVAKVYCGGQFSAALTAY 682

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+ WG+G+  RLGH     V  PK +E L    V+ +  G     ALT+   +Y WG 
Sbjct: 683 GEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGR 742

Query: 341 NNHG 344
           N++G
Sbjct: 743 NDYG 746



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK +E+     V+ + +G+ H   +T++  V+ WG    G++   +   VS P L   LS
Sbjct: 707 PKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLS 766

Query: 313 GINVQSVSCGEFQTCA 328
           G NV  + CG  Q+ A
Sbjct: 767 GKNVIGLVCGPTQSFA 782


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 206/393 (52%), Gaps = 31/393 (7%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           +++ WGEG +G LGH  +   + P +VE L G +++ V+CG   T AL+K GE+++WG +
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWG-S 266

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV---STSGQLFTYGDGTF 398
            +G  L G+   R  + P ++   L+ + +++VAC E+H+A V   S  G LF++G+  +
Sbjct: 267 GYGGRL-GQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDY 324

Query: 399 GVLGHGNLQNVSQPKE-VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG    + ++   + V SL   K+  VACG +H+AA+ +            G L+ WG
Sbjct: 325 GQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAE-----------HGSLWLWG 373

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDF---DFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
             + G+LG+ +     LP+ +    D      ++ +CG   +  +T  G+++  G   +G
Sbjct: 374 CNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYG 433

Query: 515 QLGNP--KAKDRSIT---VVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           QLG      +D  +T    V  ++  +F    ++ G  H AV+T GG ++TWG+   G+L
Sbjct: 434 QLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRL 493

Query: 569 GLGDSQERETPTFVE-ALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFR 627
           G GD+  R  PT +E  +  + V  V CG + TA       +   +  +C  C+  F   
Sbjct: 494 GHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQEVKTCMACKTRFTTV 553

Query: 628 RKKHNCYNCGLHFCSACSTKKIINASL---TPN 657
           R++H+C  CG  FC ACS+K++   SL    PN
Sbjct: 554 RRRHHCRKCGGVFCGACSSKRVPILSLGYSAPN 586



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 6/85 (7%)

Query: 2   DEKFLIWYSGQKEKQ---LRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYA--NGE- 55
           D   L W S +K K+   + ++ + ++I+GQ+T  F+    P  +  SFSI+Y   NG  
Sbjct: 79  DLSSLEWDSPRKGKEKSVVPISMMIQLIIGQKTKVFESCQVPQYECLSFSIMYKVNNGPI 138

Query: 56  RSLDLICKDKVQAESWFLGLRAAIS 80
           RSLD++CK + + + W  G++A +S
Sbjct: 139 RSLDIVCKSRREFDIWTCGIQALLS 163


>gi|308808460|ref|XP_003081540.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116060005|emb|CAL56064.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 937

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 219/443 (49%), Gaps = 52/443 (11%)

Query: 214 RKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKH 273
           R D+  +  +  E V GG          S+  T+VDA  P  +E    LDV  IS+GA+H
Sbjct: 206 RADVTPESAV--ESVSGGGFAAK-----SERWTRVDA--PSAIEGMETLDVVEISIGARH 256

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
               T+ G V+ WGEGK G+LG     D   P  V+ L G  V ++SCG   + A+ + G
Sbjct: 257 TLARTRTGAVYSWGEGKGGKLGIPSGQDFDRPTRVD-LDGRAV-ALSCGSAHSVAVVE-G 313

Query: 334 EIYTWGHNNHGADLVGERRSRS-HWLPRKLF-----DTLDGVRVSK-----------VAC 376
           E++ WG  N    L+G    RS  W P K+       TL   R ++           V+C
Sbjct: 314 EVFAWGDPNAAPGLLGLSDVRSVMWFPGKILFPSATGTLSAHRGARSLGGGGVKVVQVSC 373

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK--VKSVACGPWHTA 434
           G  HTA V+ +G  +T+G+G+F  LGHG+ ++  +P+++E+    +  V  V+CG WHTA
Sbjct: 374 GPCHTACVTETGACYTWGEGSFFALGHGDRESSREPRKLETFTRERRVVLRVSCGVWHTA 433

Query: 435 AIVDI-----------MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT-RLV 482
           AIV               +  + +++ G+LFTWGD + G+LG  D     +PT  + RL 
Sbjct: 434 AIVAASGSSVVRVPVPTNEESEFDSVDGELFTWGDGETGQLGIRDSTEAPVPTKTSNRLG 493

Query: 483 D--FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           +   +    SCG+  TV LT  G ++  G    G++ N         + + +     V+ 
Sbjct: 494 EPGSEVCSVSCGQHHTVALTSQGDLWLAGCV--GKVDNSLRTTTFTRLTDFETGS--VRT 549

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEALRDRQVESVVCGSSI 599
           ++SG  HV   T    V++WG   NG+LGLG + +++  P  +  +R R+V  + CG   
Sbjct: 550 VASGENHVVASTRDARVFSWGVGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACGP-- 607

Query: 600 TAAICLHKSISVGDQSSCSQCRM 622
           T++ C+ + + +  +   S  R+
Sbjct: 608 TSSACVLRGVQMTIKEKASMARL 630



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 15/183 (8%)

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCP-----KLVECLSGINVQSVSCGEFQTCALTKSGE 334
           +GE+F WG+G+ G+LG + + +   P     +L E   G  V SVSCG+  T ALT  G+
Sbjct: 460 DGELFTWGDGETGQLGIRDSTEAPVPTKTSNRLGE--PGSEVCSVSCGQHHTVALTSQGD 517

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           ++  G        VG+  +             +   V  VA GE H    +   ++F++G
Sbjct: 518 LWLAG-------CVGKVDNSLRTTTFTRLTDFETGSVRTVASGENHVVASTRDARVFSWG 570

Query: 395 DGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
            G  G LG G N ++   P+E+ ++RG +V  +ACGP  +A ++  +    K  A   +L
Sbjct: 571 VGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACGPTSSACVLRGVQMTIKEKASMARL 630

Query: 454 FTW 456
            T+
Sbjct: 631 STF 633



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 963  YAEQYEPGIYITFTTLPSGQKG-LKRVRFSRRRFTEKAAERWWEENQ 1008
            + E+ E G+++T      G K  LKRVRFS+R F+ + A +WWEEN+
Sbjct: 880  FTEEVEEGVFMTLEV--HGDKTILKRVRFSKRIFSNELARQWWEENR 924


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 168/327 (51%), Gaps = 15/327 (4%)

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G V+ WG G DGRLGH  N     P+L   L+G  +  V+CG + T A++  G ++T
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG   +G   +G      H  P+++ D+L G+ V  +ACG  HTAIV++ G L+T+GD  
Sbjct: 83  WGGGMYGK--LGHGNESGHSTPKRV-DSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139

Query: 398 FGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            GV GHG+ + +   PK +E L G +V  ++   +HT  + D            G+++TW
Sbjct: 140 NGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTD-----------AGEVYTW 188

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G+   GRLGH        P  V  L+    VQ SCG   +  +T  GK+YT G   HGQL
Sbjct: 189 GEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQL 248

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G+    ++    +   L   F+  I+ G  H   LTS   VYTWG   +G+LG G  ++ 
Sbjct: 249 GHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKV 308

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
            TP  VE L  ++V  V   +  TA +
Sbjct: 309 STPQLVEKLVGQKVVCVASYNEHTACL 335



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 187/369 (50%), Gaps = 30/369 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           +P+L  S     + +++ G+ H A V+ +G +F WG G  G+LGH      S PK V+ L
Sbjct: 49  VPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSL 108

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            G+ V  ++CG   T  +T  G +YTWG   +G  + G   +  H    KL + L G RV
Sbjct: 109 VGLAVVDIACGSRHTAIVTSRGCLYTWGDKENG--VAGHGDTEGHQYTPKLLERLSGKRV 166

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            +++   +HT  ++ +G+++T+G+G FG LGHG  +N   P+ VE+L G +   ++CG +
Sbjct: 167 VQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGF 226

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           H+A +              GK++T+G  + G+LGH D   K+ PT V  L      Q +C
Sbjct: 227 HSAVV-----------TADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITC 275

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           G   +V LT   +VYT G+  HG+LG+   K  S   +  KL  + V  ++S + H A L
Sbjct: 276 GWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACL 335

Query: 552 TSGGSVYTWGKNANG---QLGLG---------DSQERETPTFVEALRDRQVESVVCGSSI 599
               SV    ++A G   Q+G G         + +E    TF+  + +R V ++    +I
Sbjct: 336 VEPHSVNASRRHAPGTMVQIGAGYLHDMKELVNDEEFSDVTFI--VENRPVHAL---RAI 390

Query: 600 TAAICLHKS 608
            A  C H S
Sbjct: 391 LAKRCEHFS 399



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 3/201 (1%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           +G      T+     PKLLE      V  +S    H   +T  GEV+ WGEGK GRLGH 
Sbjct: 140 NGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHG 199

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
              +   P+LVE L G     +SCG F +  +T  G++YT+G   HG    G++ ++   
Sbjct: 200 AERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNK--- 256

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           +   L   LDGV ++++ CG  H+  +++S +++T+G+G  G LGHG  + VS P+ VE 
Sbjct: 257 VKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEK 316

Query: 418 LRGLKVKSVACGPWHTAAIVD 438
           L G KV  VA    HTA +V+
Sbjct: 317 LVGQKVVCVASYNEHTACLVE 337


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 174/364 (47%), Gaps = 47/364 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G+DG+LG     D   P LVE L       +SCG   T  LT  G++YTWG  +
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGD 62

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G   +   ++PR + D  D  +V +V CG +HTA V+ SG+L+T+G G +G LG
Sbjct: 63  DGR--LGHGDNGWKFVPRLVEDLRDK-KVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV---DIMVDRCKSNAI---------- 449
           HGN    S P  VES++GL V+ VACG  HT  ++   D+     K N +          
Sbjct: 120 HGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQ 179

Query: 450 -----------------------------GGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
                                         G++FT+G+   GRLGH     + +  C+  
Sbjct: 180 YSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDA 239

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVK 539
           L+     Q +CG   T  +T  G V+T G   HGQLG+    ++ I T VE  + +  ++
Sbjct: 240 LIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQ 299

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            ++ G  H   LT  G V+TWG   +G+LG  D+ +   P  +E    ++V SV   +  
Sbjct: 300 -LTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEH 358

Query: 600 TAAI 603
           T A+
Sbjct: 359 TVAL 362



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 12/220 (5%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           +DV  WG+   G  + G  D S  Q         P  +   V ++++ IS    H A ++
Sbjct: 157 QDVYTWGDKENG--VSGHGDTSGHQYS-------PYCVSELVEINIKQISACGFHTAALS 207

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           + G+VF +GEGK GRLGH    +    K ++ L G  ++ V+CG F T A+T+SG ++TW
Sbjct: 208 ENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTW 267

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G   HG   +G     +  +P ++   +D   + ++ CG  HT  ++  G++FT+G+G  
Sbjct: 268 GGGEHGQ--LGHGDKVNQIIPTRVESLIDK-NIIQLTCGWSHTVALTDKGEVFTWGNGDH 324

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           G LGH +   V++PK +E+    +V SVA    HT A+V+
Sbjct: 325 GKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%)

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +VYTWG+  +GQLGLGD+ ++  P  VEAL+DRQ   + CGS  T  +
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVL 49


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 187/367 (50%), Gaps = 22/367 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            +P  +ES   L    I  G +    VT +G+++  G G  GRLG      VS P L+E +
Sbjct: 3204 VPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESI 3263

Query: 312  SGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
              ++++  +V+ G     AL+  GE+Y+WG    G    G R       PR + ++L G 
Sbjct: 3264 QHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDR--PR-VIESLRGK 3320

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
             V  +ACG  H+A V++SG+L+T+G G +G LGHG+ ++  +PK  ++L+G +V  VACG
Sbjct: 3321 EVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACG 3380

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
               +  +       C S+     +++WGD D G+LG    +   +P  V  L      + 
Sbjct: 3381 SGDSQTL-------CISD--DDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKV 3431

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGS 545
             CG   ++ LT  G VYT G   + +LG+       + R +  ++GK     +  I++GS
Sbjct: 3432 ECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKK----IISIATGS 3487

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             H    +  G VYTWG N  GQLG G +   + P  V AL+D+++ +V CGS+ T A   
Sbjct: 3488 LHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWST 3547

Query: 606  HKSISVG 612
             K +  G
Sbjct: 3548 SKPLHAG 3554



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 199/394 (50%), Gaps = 32/394 (8%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            ++I   V +WG   +  LGG  G       S+ KT      P L E    L V   + G+
Sbjct: 2202 REIQTKVFVWGLNDKDQLGGPRG-------SKIKT------PVLNEFLSSLKVVCCAGGS 2248

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +VT EG+V+  GEG +GRLG   + +V  PK V  LS   V+ V+   G     AL
Sbjct: 2249 KSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMAL 2308

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG  + G   +G   SR +    +L + L   R+  +ACG  H+A V++SG+
Sbjct: 2309 TVDGKVFSWGEGDDGK--LGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGE 2365

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V++L G +V  VACG      +   + D       
Sbjct: 2366 LYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLT--LTDE------ 2417

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +++WGD D G+LG    E   +P  V RL     +Q  CG   ++ LT  G+V+T G
Sbjct: 2418 -GMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWG 2476

Query: 510  SAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
               + +LG+   +  R   V EG LK + +  ++ G+ H   +T  G V+ WG N +GQ 
Sbjct: 2477 KGDYFRLGHGTDSHVRKPQVAEG-LKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQ 2535

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G G +   + P  V+ L   ++  V CGSS + A
Sbjct: 2536 GDGSTTVNKKPALVQGLEGVRITRVACGSSHSTA 2569



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 18/276 (6%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P  + ++L  +R  ++  GE     V+  G+L+
Sbjct: 3180 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTAI-ESLTSLRPIQIVGGEQTLFAVTADGKLY 3236

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAI 449
              G G  G LG G   +VS P  +ES++ + +K VA   G  H  A+           ++
Sbjct: 3237 ATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALAL-----------SV 3285

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G++++WG+ + G+LGH +  +   P  +  L   + +  +CG   +  +T  G++YT G
Sbjct: 3286 EGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWG 3345

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQ 567
               +G+LG+  ++D+    +   LK   V  ++  SG      ++   +V++WG    G+
Sbjct: 3346 KGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGK 3405

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G S   + P  V+AL    V  V CGS  + A+
Sbjct: 3406 LGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIAL 3441



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 18/274 (6%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  R      P  L + L  ++V   A G     +V+  G+++  
Sbjct: 2207 KVFVWGLNDK--DQLGGPRGSKIKTP-VLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYAC 2263

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGG 451
            G+GT G LG G+ QNV  PK+V  L    VK VA   G  H  A+            + G
Sbjct: 2264 GEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT-----------VDG 2312

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            K+F+WG+ D G+LGH+       P  +  L        +CG   +  +T  G++YT G  
Sbjct: 2313 KVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLG 2372

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS--YHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  +  +    +   L  + V  ++ GS       LT  G VY+WG    G+LG
Sbjct: 2373 EYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S+    P  VE L  + V  + CG+  + A+
Sbjct: 2433 RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLAL 2466



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P  +ESL  L+   +  G     A+          
Sbjct: 3180 SGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVT--------- 3230

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    +    PT +  +  V    V  + G    + L+  G+
Sbjct: 3231 --ADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGE 3288

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G    G+LG  N    DR   V+E  L+ + V  I+ G  H A +TS G +YTWGK
Sbjct: 3289 VYSWGEGEDGKLGHGNRTQCDRP-RVIE-SLRGKEVIDIACGGAHSACVTSSGELYTWGK 3346

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG GDS+++  P   +AL+  +V  V CGS  +  +C+
Sbjct: 3347 GRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCI 3389



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 15/168 (8%)

Query: 221  VMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WG+G  G    G  +G SV  N  +++              V  I  GA+ +  +TK
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQ-----------GVIQIECGAQFSLALTK 2468

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G+V+ WG+G   RLGH  +  V  P++ E L G  +  V+ G     A+T +G+++ WG
Sbjct: 2469 AGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWG 2528

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+HG    G+  +  +  P  L   L+GVR+++VACG  H+   +T+
Sbjct: 2529 DNDHGQQ--GDGSTTVNKKP-ALVQGLEGVRITRVACGSSHSTAWATT 2573



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 2/164 (1%)

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
            D   S  I  K+F WG  DK +LG   G +   P     L     V  + G      +T 
Sbjct: 2197 DHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTA 2256

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYT 559
             GKVY  G   +G+LG   +++  I      L +  VK   + SG  H   LT  G V++
Sbjct: 2257 EGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFS 2316

Query: 560  WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            WG+  +G+LG       E P  +EAL+ +++  + CGSS +AA+
Sbjct: 2317 WGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAV 2360



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 13/171 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG     K  VDAL          + V  +  G++ +  +TK
Sbjct: 3394 NVWSWGDGDYGKLGRGGSDGCKVPQK--VDAL--------SSIGVCKVECGSQFSIALTK 3443

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH  +  V  P+ V  L G  + S++ G     A +  GE+YTWG
Sbjct: 3444 SGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWG 3503

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
             N+ G   +G+  + +   PR +   L   +++ VACG  HT   STS  L
Sbjct: 3504 DNDEGQ--LGDGTTNAIQRPR-IVTALQDKKITNVACGSAHTVAWSTSKPL 3551



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 249 DALLPKLLESAVMLDVQNISLGAK--HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D L PKL+         +I+LG+       VT  G +F +G G  G+LG   +     PK
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYT-----WGHNNHGADLVGERRSRSHWLPRK 361
           LV+ L G +     CG   +  LTK+G +YT     W  + H +  VG     S  + R 
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWS--VGLHVPFSVDVTRT 121

Query: 362 LFDTLD 367
            F+ LD
Sbjct: 122 TFEKLD 127



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 46/102 (45%)

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            KV+  G     QLG P+       V+   L    V   + GS  + V+T+ G VY  G+ 
Sbjct: 2207 KVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEG 2266

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             NG+LGLG SQ  + P  V  L    V+ V   S    A+ L
Sbjct: 2267 TNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMAL 2308



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 412 PKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
           PK V  L+  K   +A G     T A+ D            G LF++G+ D G+LG    
Sbjct: 8   PKLVSGLKEQKFVHIALGSNDGQTLAVTDT-----------GLLFSFGNGDYGKLGRGGS 56

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +   LP  V +L     V A CG   +V LT  G VYT
Sbjct: 57  DGCKLPKLVDKLQGQHAVIACCGNQFSVILTKTGTVYT 94


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/392 (33%), Positives = 196/392 (50%), Gaps = 36/392 (9%)

Query: 219  KDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            K V +WG   +  LGG  G  +              +P+ ++  V L   +++ G+K   
Sbjct: 2698 KRVYVWGLNDKEQLGGPKGSKIK-------------VPQAVDWTVSLQPISVAGGSKSLF 2744

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSG 333
            LVT+ G+ +  GEG +GRLG   + +V+ P  +  LS   V+ V+   G     ALT  G
Sbjct: 2745 LVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADG 2804

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
             +++WG  + G   +G     S   PR + + L+G RV  VA G  H+A V++SG+L+T+
Sbjct: 2805 RVFSWGEGDDGK--LGHGDVTSLDTPRCI-EALNGFRVRDVAAGSNHSAAVTSSGELYTW 2861

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGG 451
            G G +G LGHG+      PK VESL G +V  V+CG     T A+V+           GG
Sbjct: 2862 GLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE-----------GG 2910

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
             +++WGD D G+LG    E    P  V +L         CG   +V LT  G VYT G  
Sbjct: 2911 LVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKG 2970

Query: 512  VHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
             + +LG+   +  R  T+VEG L+ + V G+S G+ H   +T  G V+ WG N +GQ G 
Sbjct: 2971 DYFRLGHGSDQHVRWPTLVEG-LRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGN 3029

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G       PT V+ +   ++  V CGSS + A
Sbjct: 3030 GSITVNRRPTLVQGIDGIKITRVACGSSHSVA 3061



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 190/385 (49%), Gaps = 45/385 (11%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            +P + E+   L    ++ G +    +T +G V+  G G  GRLG      V+ P L+E L
Sbjct: 3637 VPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESL 3696

Query: 312  SGINVQ--SVSCGEFQTCALTKSGEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFD 364
              + V+  +V+ G     AL+  GE+Y+WG        HG  L  +R       PR + +
Sbjct: 3697 QHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDR-------PR-IIE 3748

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            +L G  V  VACG  H+A ++  G+L+T+G G +G LGHG+  +  +PK VE+L G +V 
Sbjct: 3749 SLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVM 3808

Query: 425  SVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
             VACG     T AI D           GG +++WGD D G+LG    +   +PT +  L 
Sbjct: 3809 DVACGSGDAQTCAITD---------EEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLS 3859

Query: 483  DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFV 538
                ++  CG   +V L+  G VYT G   + +LG+       + + +  ++GK     V
Sbjct: 3860 GLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKK----V 3915

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
              IS+G+ H  V T  G VYTWG N  GQLG G +   + P  V AL+++++  V CGS+
Sbjct: 3916 ISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSA 3975

Query: 599  ITAAICLHKSISVGDQSSCSQCRMP 623
             T A            S+C  C  P
Sbjct: 3976 HTVA-----------WSTCKGCSTP 3989



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 147/287 (51%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G VF WGEG DG+LGH     +  P+ +E L+G  V+ V+ G   + A+
Sbjct: 2793 GGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAV 2852

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G   +G   + +   P+++ ++L G RV +V+CG  +  T  +   
Sbjct: 2853 TSSGELYTWGLGEYGR--LGHGDNLTQLTPKRV-ESLVGQRVVQVSCGSRDAQTLALVEG 2909

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G ++++GDG FG LG G  +  S P  V+ L GL V  V CG   + A+       C   
Sbjct: 2910 GLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALT------CN-- 2961

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH   +    PT V  L     +  S G +  + +T  G+V+ 
Sbjct: 2962 ---GHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFA 3018

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G +    +  ++ GS H    T+
Sbjct: 3019 WGDNDHGQQGNGSITVNRRPTLVQG-IDGIKITRVACGSSHSVAWTA 3064



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 139/283 (49%), Gaps = 26/283 (9%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WGEG    D G    G V+   T      P+ +E+     V++++ G+ H+A VT  
Sbjct: 2806 VFSWGEG----DDGKLGHGDVTSLDT------PRCIEALNGFRVRDVAAGSNHSAAVTSS 2855

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYTW 338
            GE++ WG G+ GRLGH  N+    PK VE L G  V  VSCG  + QT AL + G +Y+W
Sbjct: 2856 GELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSW 2915

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G  + G   +G   S     P  L D L G+ V  V CG   +  ++ +G ++T+G G +
Sbjct: 2916 GDGDFGK--LGRGGSEGCSSP-CLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDY 2972

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
              LGHG+ Q+V  P  VE LRG KV  V+ G  H  A+ D            G++F WGD
Sbjct: 2973 FRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD-----------AGQVFAWGD 3021

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
             D G+ G+        PT V  +      + +CG   +V  T 
Sbjct: 3022 NDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVAWTA 3064



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 159/333 (47%), Gaps = 22/333 (6%)

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
            V+    V+ WG     +LG      +  P+ V+    +   SV+ G      +T+SG+ Y
Sbjct: 2694 VSGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAY 2753

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYG 394
              G  ++G   +G  R+ +   P ++   L    V KVA   G  H   ++  G++F++G
Sbjct: 2754 ACGEGSNGRLGLGHSRNVNS--PHQI-TALSQHVVRKVAVHSGGRHALALTADGRVFSWG 2810

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            +G  G LGHG++ ++  P+ +E+L G +V+ VA G  H+AA+              G+L+
Sbjct: 2811 EGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTS-----------SGELY 2859

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
            TWG  + GRLGH D   +L P  V  LV    VQ SCG     T+ L   G VY+ G   
Sbjct: 2860 TWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGD 2919

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
             G+LG   ++  S   +  KL    V  +  G+     LT  G VYTWGK    +LG G 
Sbjct: 2920 FGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGS 2979

Query: 573  SQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             Q    PT VE LR ++    V G S+ A  CL
Sbjct: 2980 DQHVRWPTLVEGLRGKK----VIGVSVGALHCL 3008



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 16/289 (5%)

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            Q+      G+IY WGHN+ G   +G        +P  + + L  +R  ++A GE     +
Sbjct: 3606 QSWTAVGGGQIYGWGHNHRGQ--LGGVEGAKVKVP-TVCEALSALRPIQLAGGEQTLFAI 3662

Query: 385  STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            ++ G+++  G G  G LG G  ++V+ P  +ESL+ + VK VA         V+     C
Sbjct: 3663 TSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVA---------VNSGGKHC 3713

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
             + +  G++++WG+ + G+LGH +      P  +  L   D V  +CG   +  +T LG+
Sbjct: 3714 LALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGE 3773

Query: 505  VYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTS--GGSVYTW 560
            +YT G   +G+LG+  + D+    +VE  L    +     SG      +T   GG+V++W
Sbjct: 3774 LYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSW 3833

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            G    G+LG G S   + PT +E+L    +  V CGS  + A+  + S+
Sbjct: 3834 GDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSV 3882


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 178/342 (52%), Gaps = 16/342 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  +S G+ H+  +   G V  WG G+DG+LGH    +   PK +  L+   ++SV CG 
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 324 FQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
             T A+  S G++Y+WG  + G   +G       ++PR + +   G  V +VACG+ HT 
Sbjct: 75  EYTIAVAPSRGQVYSWGWGDFGR--LGHGDCNDVFVPRPI-EFFSGRPVHRVACGDTHTL 131

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +V+  G+LFT+G    G LG G+  +   P+ V +L+G +V+SVACG  H+ A  +    
Sbjct: 132 VVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE---- 187

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   G +F+WG    G LG  + + + LPT V  L     V A CG   +  ++  
Sbjct: 188 -------SGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSED 240

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G+V+T G + +GQLG+    DR++      L+   +  ++ G  H     S G++Y WG 
Sbjct: 241 GRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGW 300

Query: 563 NANGQLGLGDSQERETPTFV-EALRDRQVESVVCGSSITAAI 603
           N  GQLGLGDS +R +P  V  AL  ++V  V CG   T A+
Sbjct: 301 NKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAV 342



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 167/340 (49%), Gaps = 17/340 (5%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +   +   + L PK + +     ++++  GA++  A+    G+V+ WG G  GRLGH
Sbjct: 42  DGQLGHGQAD-ECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGH 100

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               DV  P+ +E  SG  V  V+CG+  T  +   GE++T+G N +G   +G       
Sbjct: 101 GDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDC-- 158

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            L  +L   L G RV  VACG  H+   + SG +F++G G +G LG G  Q+   P  V 
Sbjct: 159 -LSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVV 217

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L G+++ S  CG  H+A + +            G++FT+G +  G+LGH D   + +P 
Sbjct: 218 GLEGIRMVSAECGWRHSAVVSED-----------GRVFTFGWSKYGQLGHGDHTDRTVPC 266

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKE 535
            V  L        + G   T+     G +Y  G    GQLG   + DR S  +V G L  
Sbjct: 267 QVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAG 326

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           + V  ++ G  H   +T GG VY+WG+  NGQLG G  Q+
Sbjct: 327 QRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 3/171 (1%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G++   ++Q D  LP  +     + + +   G +H+A+V+++G VF +G  K G+LGH  
Sbjct: 200 GNLGDGESQ-DRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGD 258

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           + D + P  V  L    + SV+ G   T A   SG +Y WG N  G   +G+   R    
Sbjct: 259 HTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPS-- 316

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
           P  +   L G RVS V CG  HT  V+  G+++++G G  G LGHG  Q++
Sbjct: 317 PVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 39/70 (55%)

Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           +E  V  +S GS H   + S G V +WG+  +GQLG G + E   P  +  L D  +ESV
Sbjct: 11  EEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESV 70

Query: 594 VCGSSITAAI 603
           VCG+  T A+
Sbjct: 71  VCGAEYTIAV 80


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 17/350 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     + D LLP+++ +    ++  ++ GA H  A       ++ WG G  GRLGH
Sbjct: 34  DGQLGHGDAE-DRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGH 92

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P  ++ L G+ ++ ++CG+    A+T  GE+Y+WG N +G   +G+  +   
Sbjct: 93  GNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGD--TDDS 150

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P KL    +GV V  +A G  HTA V+ SG+L+ +G G +G LG G+  +   P EV 
Sbjct: 151 LVPHKLL-AFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVP 209

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++   K+  VACG  HT A+           +  GKL+T+G +  G+LGH D    LLP 
Sbjct: 210 AVGDEKMCMVACGWRHTIAV-----------SQSGKLYTYGWSKYGQLGHGDYADHLLPH 258

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKE 535
            V  L +F+  Q S G   TV LT  GK+Y  G    GQ+G+    D  S  ++    + 
Sbjct: 259 QVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQH 318

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           + V  +S G  H   +T   +VY+WG+  +GQLG GD+ +R  P  ++AL
Sbjct: 319 QRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 18/340 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +S GA H   +   G+V C +G G+DG+LGH    D   P+++  L+   +  V+CG   
Sbjct: 10  VSAGASHTVALLS-GQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADH 68

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A + +   IY+WG  + G   +G   S   ++P  +   L G+ + ++ACG+ H   V
Sbjct: 69  TTAYSATRLTIYSWGWGDFGR--LGHGNSSDLFVPHPI-KALQGLEIRQIACGDSHCLAV 125

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G+++++G    G LG G+  +   P ++ +  G+ VK +A G  HTAA+ D      
Sbjct: 126 TADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD------ 179

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 GKL+ WG    G LG  D   ++LP  V  + D      +CG   T+ ++  GK
Sbjct: 180 -----SGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+    D  +      L E  +  +S G  H   LT  G +Y WG N 
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNK 294

Query: 565 NGQLGLGDSQERETPTFVEALRDRQ-VESVVCGSSITAAI 603
            GQ+G GD  +  +P  +      Q V  V CG   T A+
Sbjct: 295 FGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  V+ G  HT  + +   + ++G G  G LGHG+ ++   P+ + +L   ++  VACG
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACG 65

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A     +           +++WG  D GRLGH +     +P  +  L   +  Q 
Sbjct: 66  ADHTTAYSATRL----------TIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQI 115

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+VY+ G   +GQLG     D  +       +   VK +++G+ H A
Sbjct: 116 ACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTA 175

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V A+ D ++  V CG   T A+
Sbjct: 176 AVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAV 229



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT +  V+ WG G  G+LGH   +D S PK ++ LS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 173/341 (50%), Gaps = 16/341 (4%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
            Q +  G     ++   G V   GEG  GRLG   + D+    ++  L G  V  +  SCG
Sbjct: 4011 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4070

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  V +++CG  H+
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4127

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            A+V+  G+LFT+G+G +G LG GN  N   P+ V +L GL +  VACG  HT A+     
Sbjct: 4128 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV----- 4182

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +A G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT 
Sbjct: 4183 -----SADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4237

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
             G VYT G      L   +A++ +   +   L   F+  I+ G+ H   L++ G VY WG
Sbjct: 4238 DGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWG 4297

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             N+ GQLGLG +     PT V AL+ + +  +  G   +AA
Sbjct: 4298 SNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAA 4338



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 22/349 (6%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +V++  EV+ WG     +L       +  PKL  C S  + Q++  G++ T  ++  G +
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFS--DAQTIEAGQYCTFVISTDGSV 424

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T G++F++G
Sbjct: 425 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 395 DGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK ++ +L+G  V  V+ G  H+AA+ +            G+L
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE-----------DGEL 532

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G   
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG+          V   L+  F + + +GS     LTS G VY WG  A   LG G 
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGS 648

Query: 573 SQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 649 SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 168/365 (46%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  +    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKL--APCFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
             TL G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 38/327 (11%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G    D G    G+  + +       P+ +E+    +V  +S G KH+A+VT 
Sbjct: 4083 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVVQMSCGFKHSAVVTA 4132

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
            +G++F +G G  GRLG     +   P+ V  L G+++  V+CG   T A++  G  ++ +
Sbjct: 4133 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAF 4192

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G  ++G   +G   ++S   P+K+ D L G+ + KVACG   +  ++  G ++T+G    
Sbjct: 4193 GDGDYGKLGLGNSTAKSS--PQKV-DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4249

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
              L  G  +N ++P+ V  L G+ +  +A G  HT A+           +  G+++ WG 
Sbjct: 4250 IGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLAL-----------SASGEVYAWGS 4298

Query: 459  ADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQ 515
              +G+  LGH +  R+  PT VT L   +  Q S GR  +   T         G AV  Q
Sbjct: 4299 NSEGQLGLGHTNHVRE--PTLVTALQGKNIRQISAGRCHSAAWTAAPVPPRAPGVAVPLQ 4356

Query: 516  LGNPKA--------KDRSITVVEGKLK 534
            LG P          KD  +  V  +L+
Sbjct: 4357 LGLPDVIPPQYSCLKDICLHTVRARLR 4383



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3979 DVFLWGAGRHGQ--LAEA-GRNVMIPSGAGSF---SQAQQVICGQNCTFVIQANGTVLAC 4032

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4081

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4082 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 4141

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4142 GDYGRLGLGNTSNKKLPER-VTALEGLHIGQVACGLN---HTLAVSADGSLVWAFGDGDY 4197

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4198 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4235



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGTLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+   KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPR 738



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+  + V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDR 740



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     +F +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3971 DWH---LGGKCDVFLWGAGRHGQLAEAG-RNVMIPSGAGSFS--QAQQVICGQNCTFVI- 4023

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4024 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4073

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4129

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +T+ G ++T+G    G+LGLG++  ++ P  V AL    +  V CG + T A+    S+
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSL 4188


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 191/386 (49%), Gaps = 29/386 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G           G +++    +  L+P L  S      Q +  G     ++  
Sbjct: 3983 DVFLWGAGR---------HGQLAEAGRNI--LVPTLAPS--FSQAQQVVCGQNCTFVIQA 4029

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVF 4089

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LF++G+G
Sbjct: 4090 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNG 4146

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G +V  VACG  HT A+          +A G  ++ +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAV----------SADGMTVWAF 4196

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      L
Sbjct: 4197 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGL 4256

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
               +A++ +       L   F++ ++ G+ H   L+S G VY WG N+ GQLGLG +   
Sbjct: 4257 PEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHV 4316

Query: 577  ETPTFVEALRDRQVESVVCGSSITAA 602
              PT + AL+ + ++ +  G   +AA
Sbjct: 4317 REPTLISALQGKNIQQISAGRCHSAA 4342



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 171/357 (47%), Gaps = 22/357 (6%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+ A  AA+V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 354 SIQAGEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 411

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    + +VS     + HT   ++
Sbjct: 412 VISSDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRAIKKVSSSKGSDGHTLAFTS 470

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 471 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE------- 523

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 524 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 577

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V++ G   +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 637

Query: 565 NGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              LG G S+     P  +E L   +V  +  G S   A+     +     +S  QC
Sbjct: 638 C--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQC 692



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 166/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 384 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTL 441

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +       ++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 442 KKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 499

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A VS  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 500 QGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 557

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 558 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 607

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     V
Sbjct: 608 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELATTRV 662

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 663 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGT 722

Query: 598 SITAA 602
           S + A
Sbjct: 723 SHSLA 727



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 31/331 (9%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +VF WG G+ G+L  +   ++  P L    S    Q V CG+  T  +  +G +   G  
Sbjct: 3983 DVFLWGAGRHGQLA-EAGRNILVPTLAPSFS--QAQQVVCGQNCTFVIQANGTVSACGEG 4039

Query: 342  NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
            ++G   +G+  S   H L   +   L G  V+++  +CG + H+  ++ SG++F++GDG 
Sbjct: 4040 SYGR--LGQGNSDDLHVL--TVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGD 4095

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +G LGHGN     +P+++E+L+G +V  ++CG  H+A +              GKLF++G
Sbjct: 4096 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFSFG 4144

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG-KVYTMGSAVHGQL 516
            + D GRLG  +   K LP  V+ L      Q +CG   T+ ++  G  V+  G   +G+L
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKL 4204

Query: 517  G----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            G      K+  + + V+ G      +K ++ G+     LT  G+VYT+G++    L  G 
Sbjct: 4205 GLGNSTAKSSPQKVDVLCGI----GIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGR 4260

Query: 573  SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            ++    P  V AL    +E V  G+  T  +
Sbjct: 4261 ARNHNRPQQVPALTGVFIEDVAVGAEHTLTL 4291



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 526 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 572

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 573 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 632

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   RV  ++ G+ H   +S   +++ +G+ +
Sbjct: 633 WG---CGACL-GCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNS 688

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 689 MGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDR 735



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     +F +G G  G L     +N+  P    S    + + V CG   T  I 
Sbjct: 3975 DWH---LGGKCDVFLWGAGRHGQLAEAG-RNILVPTLAPSFS--QAQQVVCGQNCTFVI- 4027

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4028 -------QAN---GTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDG 4077

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4136

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++++G    G+LGLG++  ++ P  V AL   QV  V CG + T A+
Sbjct: 4137 DGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAV 4186



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ + +   + ++++++GA+H   ++  G+V+ WG   +G+LG      V  P L+  L 
Sbjct: 4267 PQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQ 4326

Query: 313  GINVQSVSCGEFQTCALT 330
            G N+Q +S G   + A T
Sbjct: 4327 GKNIQQISAGRCHSAAWT 4344


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3983 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4029

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4090 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4196

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4197 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4254

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4255 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4310

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4311 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4342



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3983 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4036

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4085

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4086 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4145

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4146 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4201

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4202 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4239



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3975 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4027

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4028 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4077

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4133

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4186



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4267 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4326

Query: 313  GINVQSVSCGEFQTCALT 330
            G NV+ +S G   + A T
Sbjct: 4327 GKNVRQISAGRCHSAAWT 4344


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3961 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4007

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4067

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4068 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4124

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4125 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4174

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4175 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4232

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4233 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4288

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4289 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4320



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3961 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4014

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4063

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4064 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4123

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4124 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4179

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4180 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4217



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3953 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4005

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4006 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4055

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4056 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4111

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4170



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4245 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4304

Query: 313  GINVQSVSCGEFQTCALT 330
            G NV+ +S G   + A T
Sbjct: 4305 GKNVRQISAGRCHSAAWT 4322


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 191/398 (47%), Gaps = 53/398 (13%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G           G +++    +  L+P +  S      Q +  G     ++  
Sbjct: 4073 DVFLWGAGR---------HGQLAEAGRNI--LVPTIAPS--FSQAQQVVCGQNCTFVIQP 4119

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4120 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4179

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V+  G+LFT+G+G
Sbjct: 4180 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4236

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P++V +L G  V  VACG  HT  +          +A G  ++ +
Sbjct: 4237 DYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVV----------SADGMMVWAF 4286

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  GKV+T G       
Sbjct: 4287 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFG------- 4339

Query: 517  GNPKAKDRSITVVEGKLKEE------------FVKGISSGSYHVAVLTSGGSVYTWGKNA 564
                 +DR I + EG+ +               ++ ++ G+ H  VL+S G VYTWG N+
Sbjct: 4340 -----QDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNS 4394

Query: 565  NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             GQLGLG +     PT V  L+ + +  +  G   +AA
Sbjct: 4395 EGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAA 4432



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 194/456 (42%), Gaps = 59/456 (12%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 396 TQEKILQPKLASS--FADAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTL 453

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +       ++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 454 KKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 511

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A VS  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 512 QGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 569

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 570 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 619

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     V
Sbjct: 620 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELATTRV 674

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 675 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGT 734

Query: 598 SITAA----------ICLHKSISVG-DQSSCSQCR----------------MPFGFRRKK 630
           S + A          +  H+   V  ++S+ S  R                +PF   R+ 
Sbjct: 735 SHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERYCDGINSEVPPLPFPSSREH 794

Query: 631 HNCYNCGLHFCS---ACSTKKIINASLTPNKGKPSR 663
           HN     L   S   A +    +  S+   + +P R
Sbjct: 795 HNFLKLCLRLLSNHLALALAGGVATSILGRQARPLR 830



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 22/349 (6%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +V++  EV+ WG     +L       +  PKL    +  + Q++  G++ T  ++  G +
Sbjct: 374 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFA--DAQTIEAGQYCTFVISSDGSV 431

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  ++S  L +  F+    + +VS     + HT   +T G++F++G
Sbjct: 432 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWG 490

Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +            G+L
Sbjct: 491 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE-----------DGEL 539

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G   
Sbjct: 540 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 597

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A   LG G 
Sbjct: 598 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGS 655

Query: 573 SQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           S+     P  +E L   +V  +  G S   A+     +     +S  QC
Sbjct: 656 SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQC 704



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL--DGVRVSKVACGEWHTAIVSTSGQLF 391
            +++ WG   HG      R          L  T+     +  +V CG+  T ++  +G + 
Sbjct: 4073 DVFLWGAGRHGQLAEAGRN--------ILVPTIAPSFSQAQQVVCGQNCTFVIQPNGTVL 4124

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNA 448
              G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +          
Sbjct: 4125 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4174

Query: 449  IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
              G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T 
Sbjct: 4175 -SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTF 4233

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS-VYTWGKNANGQ 567
            G+  +G+LG     ++ +      L+   V  ++ G  H  V+++ G  V+ +G    G+
Sbjct: 4234 GNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGK 4293

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4294 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4329



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 25/295 (8%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
           ++  S+  GE  T  ++++ E+Y WG N+    + G   ++   L  KL  +    +   
Sbjct: 362 VSPDSIQTGE--TPVVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLASSFADAQT-- 414

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRGLK-VKSVACGP 430
           +  G++ T ++S+ G +   G G++G LG G+  N S  K++  E  R +K V S     
Sbjct: 415 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSD 474

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ-A 489
            HT A               G++F+WGD D G+LGH +   +  P  +   +    V   
Sbjct: 475 GHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCV 523

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           S G   +  ++  G++YT G    G+LG+  +  R+I  +   +    V  +S GS H  
Sbjct: 524 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTI 581

Query: 550 VLTSGG-SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            L+  G +V+++G   NG+LG GD+     P  VEAL+   +  V  GS  + A+
Sbjct: 582 ALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLAL 636



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 538 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 584

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 585 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 644

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   RV  ++ G+ H   +S   +++ +G+ +
Sbjct: 645 WG---CGACL-GCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNS 700

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 701 MGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDR 747



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     +F +G G  G L     +N+  P    S    + + V CG   T  I 
Sbjct: 4065 DWH---LGGKCDVFLWGAGRHGQLAEAG-RNILVPTIAPSFS--QAQQVVCGQNCTFVI- 4117

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                         G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4118 ----------QPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4167

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4168 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4223

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T+ G ++T+G    G+LGLG++  ++ P  V AL    V  V CG + T  +
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVV 4276



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 262  LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
            + +Q++++GA+H  +++  G+V+ WG   +G+LG      V  P LV  L G N+  +S 
Sbjct: 4366 IHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGKNIHQISA 4425

Query: 322  GEFQTCALT 330
            G   + A T
Sbjct: 4426 GRCHSAAWT 4434


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3990 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4036

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4097 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4203

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4204 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4261

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4262 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4317

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4318 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4349



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3990 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4043

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4092

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4093 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4152

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4153 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4208

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4209 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4246



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3982 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4034

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4035 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4084

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4140

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4193



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4274 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4333

Query: 313  GINVQSVSCGEFQTCALT 330
            G NV+ +S G   + A T
Sbjct: 4334 GKNVRQISAGRCHSAAWT 4351


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3991 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4037

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4098 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4204

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4205 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4262

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4263 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4318

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4319 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4350



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3991 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4044

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4093

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4094 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4153

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4154 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4209

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3983 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4035

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4036 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4085

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4141

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4194



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4275 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4334

Query: 313  GINVQSVSCGEFQTCALT 330
            G NV+ +S G   + A T
Sbjct: 4335 GKNVRQISAGRCHSAAWT 4352


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTGLQGKNIRQISAGRCHSAA 4357



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4341

Query: 313  GINVQSVSCGEFQTCALT 330
            G N++ +S G   + A T
Sbjct: 4342 GKNIRQISAGRCHSAAWT 4359


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4151

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4341

Query: 313  GINVQSVSCGEFQTCALT 330
            G NV+ +S G   + A T
Sbjct: 4342 GKNVRQISAGRCHSAAWT 4359


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 184/350 (52%), Gaps = 24/350 (6%)

Query: 266  NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GE 323
            +I+ G+K   +V+ EG+++  GEG +GRLG   + +V  P+ +  LS   ++ V+   G 
Sbjct: 2092 HIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGG 2151

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
                ALT  G++++WG    G    G R +       K+ + L   ++  +ACG  H+A 
Sbjct: 2152 KHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDK---PKMIEALRSKKIRDIACGSSHSAA 2208

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGP--WHTAAIVDI 439
            +++SG+L+T+G G +G LGHG+  N++Q  PK ++SL G ++  VACG     T A+ D 
Sbjct: 2209 ITSSGELYTWGLGEYGRLGHGD--NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTD- 2265

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                       G +F+WGD D G+LG    E   +P  + RL   + VQ  CG   ++ L
Sbjct: 2266 ----------EGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL 2315

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
            T  G+V+T G   + +LG+   +  R  TV+E  LK++ V  ++ G+ H   +T  G VY
Sbjct: 2316 TKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIE-SLKDKKVIHVAVGALHCLAVTDTGQVY 2374

Query: 559  TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
             WG N +GQ G G +     P  V  L D  +  V CGSS + A  L  +
Sbjct: 2375 AWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQDT 2424



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 153/306 (50%), Gaps = 26/306 (8%)

Query: 250  ALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
             L+P LLES   + ++ I++  G KH   ++ + +V+ WGEG DG+LGH   +    PKL
Sbjct: 3104 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKL 3163

Query: 308  VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
            +E L G  +  ++CG   + A+T +G++YTWG   +G   +G   S     P KL + L 
Sbjct: 3164 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR--LGHGDSEDQLKP-KLIEELV 3220

Query: 368  GVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
            G +V  VAC  G+  T  ++    ++++GDG +G LG G       PK++ESL GL V  
Sbjct: 3221 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIK 3280

Query: 426  VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
            V CG   + A+              G ++TWG  D  RLGH  GE    P  V  L    
Sbjct: 3281 VECGSQFSVALTR-----------SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKK 3329

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+V+T G    GQLG    N   + R ++ ++GK     +  +
Sbjct: 3330 IISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKK----ITNV 3385

Query: 542  SSGSYH 547
            + GS H
Sbjct: 3386 ACGSAH 3391



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 26/334 (7%)

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGE 334
            VT +G+V+  G G  GRLG      V  P L+E +  + ++  +V+ G     AL+   +
Sbjct: 3079 VTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADND 3138

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +Y+WG  + G    G R +       KL + L G  +  +ACG  H+A ++++GQL+T+G
Sbjct: 3139 VYSWGEGDDGKLGHGNRLACE---TPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG 3195

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGK 452
             G +G LGHG+ ++  +PK +E L G KV  VACG     T  I D              
Sbjct: 3196 KGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITD-----------DDN 3244

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +++WGD D G+LG    +   +P  +  L     ++  CG   +V LT  G VYT G   
Sbjct: 3245 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 3304

Query: 513  HGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            + +LG+       + + +  ++GK     +  I++GS H    +  G V+TWG N  GQL
Sbjct: 3305 YHRLGHGTGEHVRRPKKVAALQGKK----IISIATGSLHCVACSDEGEVFTWGDNDEGQL 3360

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G   +   + P  V AL+ +++ +V CGS+ T A
Sbjct: 3361 GDDTTNAIQRPRLVSALQGKKITNVACGSAHTLA 3394



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 28/283 (9%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WGEG          DG +   N+  +D   PK++E+     +++I+ G+ H+A +T 
Sbjct: 2163 VFSWGEGE---------DGKLGHGNRLNLDK--PKMIEALRSKKIRDIACGSSHSAAITS 2211

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
             GE++ WG G+ GRLGH  N+    PKL++ L G  +  V+CG  + QT ALT  G +++
Sbjct: 2212 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 2271

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  + G   +G   S    +P  + + L+ + V ++ CG   +  ++ +G+++T+G G 
Sbjct: 2272 WGDGDFGK--LGRGGSEGCNIPHNI-ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGD 2328

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +  LGHG+ Q+V +P  +ESL+  KV  VA G  H  A+ D            G+++ WG
Sbjct: 2329 YFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDT-----------GQVYAWG 2377

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            D D G+ G+        P  V  L D    + +CG   ++  T
Sbjct: 2378 DNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 15/194 (7%)

Query: 249  DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
            D L PKL+E  V   V +++ G+  A    +T +  V+ WG+G  G+LG   +     PK
Sbjct: 3209 DQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPK 3268

Query: 307  LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
             +E L+G+ V  V CG   + ALT+SG +YTWG  +     HG    GE   R    P+K
Sbjct: 3269 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGT---GEHVRR----PKK 3321

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +   L G ++  +A G  H    S  G++FT+GD   G LG      + +P+ V +L+G 
Sbjct: 3322 V-AALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGK 3380

Query: 422  KVKSVACGPWHTAA 435
            K+ +VACG  HT A
Sbjct: 3381 KITNVACGSAHTLA 3394



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 136/299 (45%), Gaps = 33/299 (11%)

Query: 315  NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            NV   S GE  +   T    ++ WG N+   D +G  +     LP +  D L  +    +
Sbjct: 2040 NVAQDSTGEPSS---TVGCRVFVWGLNDK--DQLGGMKGSKVKLPVQ-SDFLSQLWPIHI 2093

Query: 375  ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWH 432
            A G     IVS  G+L+  G+GT G LG G+  NV  P+ +  L    +K VA   G  H
Sbjct: 2094 AGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKH 2153

Query: 433  TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQAS 490
              A+            + GK+F+WG+ + G+LGH  G R  L  P  +  L        +
Sbjct: 2154 AMAL-----------TLDGKVFSWGEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIA 2200

Query: 491  CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG----ISSGS- 545
            CG   +  +T  G++YT G   +G+LG+      +IT ++ KL +  V      ++ GS 
Sbjct: 2201 CGSSHSAAITSSGELYTWGLGEYGRLGH----GDNITQLKPKLIKSLVGHRIVQVACGSR 2256

Query: 546  -YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                  LT  G V++WG    G+LG G S+    P  +E L   +V  + CG+  + A+
Sbjct: 2257 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL 2315



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 22/278 (7%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+++
Sbjct: 3030 SGTIYGWGHNHRGQ--LGGIEGAKVKIPTPC-EALSTLRPVQLVGGEQTLFAVTADGKVY 3086

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G   +V  P  +ES++ + +K +A         V+     C + +   
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIA---------VNSGGKHCLALSADN 3137

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
             +++WG+ D G+LGH +      P  +  L  ++ +  +CG   +  +T  G++YT G  
Sbjct: 3138 DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKG 3197

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVK------GISSGSYHVAVLTSGGSVYTWGKNAN 565
             +G+LG+  ++D+    ++ KL EE V          SG      +T   +V++WG    
Sbjct: 3198 RYGRLGHGDSEDQ----LKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDY 3253

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG G S   + P  +E+L    V  V CGS  + A+
Sbjct: 3254 GKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 3291



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            +PK +ES   L V  +  G++ +  +T+
Sbjct: 3244 NVWSWGDGDYGKLGRGGSDG----------CKVPKKIESLAGLGVIKVECGSQFSVALTR 3293

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A +  GE++TWG
Sbjct: 3294 SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 3353

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+  + +   PR L   L G +++ VACG  HT   ST+
Sbjct: 3354 DNDEGQ--LGDDTTNAIQRPR-LVSALQGKKITNVACGSAHTLAWSTN 3398



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 15/222 (6%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAV---------- 3079

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GK++  G    GRLG    +  L+PT +  +  V    +  + G    + L+    
Sbjct: 3080 -TADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADND 3138

Query: 505  VYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            VY+ G    G+LG+  +    +  ++E     E +  I+ G  H A +TS G +YTWGK 
Sbjct: 3139 VYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIID-IACGGAHSAAITSTGQLYTWGKG 3197

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
              G+LG GDS+++  P  +E L   +V  V CGS     +C+
Sbjct: 3198 RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 3239


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 211/409 (51%), Gaps = 36/409 (8%)

Query: 212  IERKDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNIS 268
            I+  DI   V +WG   +G LGG  G  V               P  +++   L   +I+
Sbjct: 2862 IDNTDIDSRVFVWGLNDKGQLGGCKGSKVKS-------------PTEMKNIAALRPVSIA 2908

Query: 269  LGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQT 326
             G+K   +VT +G+V+  GEG +GRLG     ++S P  ++ L+   V+ V+   G   +
Sbjct: 2909 GGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHS 2968

Query: 327  CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              +T+ G++++WG    G    G+  SR   L   L + L+   + ++ACG  H+A V+ 
Sbjct: 2969 LCITREGKVFSWGEGIDGKLGHGDVTSR---LSPTLIEALESKLIVEIACGSSHSAAVTA 3025

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRC 444
             G+L+T+G G +G LGHG+ + +  PK+V++L+  KV  +ACG     T A+ D   + C
Sbjct: 3026 DGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTD---NNC 3082

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                    +++WGD D G+LG    E   +P  +  L   D  + +CG   ++ L+  GK
Sbjct: 3083 --------VWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGK 3134

Query: 505  VYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+T G   + +LG+   +  RS  ++EG LK++ +  I+ G+ H   +T  G VY+WG N
Sbjct: 3135 VWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDN 3194

Query: 564  ANGQLGLGDSQERETPTF-VEALRDRQVESVVCGSSITAAICLHKSISV 611
             +GQ G G++   + P   +  L   ++  + CGSS + A C +  ++V
Sbjct: 3195 DHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIAWCGNLQLTV 3243



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 203/422 (48%), Gaps = 50/422 (11%)

Query: 223  IWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +WG    G LGG  G  V   V      ++ ++  L  +AV       + G +   ++T 
Sbjct: 3774 VWGHNHRGQLGGVQGTKVKSPV------INDIIAALRPTAV-------AGGEQTLFILTS 3820

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYT 337
            EG+V+  G G  GRLG   + ++  P ++E L  + ++  SV  G      LT + E+++
Sbjct: 3821 EGKVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFS 3880

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG    G   +G     S   PRK+ + L G ++  ++CG  H+A +++ G+L+T+G G 
Sbjct: 3881 WGDGEDGK--LGHGDKLSSETPRKI-EALLGKQIVHISCGSSHSAAITSKGELYTWGKGR 3937

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFT 455
            +G LGHG+  +  +PK +E+L+  KV  VACG     T AI D   D C        +++
Sbjct: 3938 YGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITD---DDC--------VWS 3986

Query: 456  WGDADKGRLGH--VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            WGD D G+LG    DG +K  P  +  L+     +  CG   +V LT  G +YT G   +
Sbjct: 3987 WGDGDYGKLGRGGSDGCKK--PLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDY 4044

Query: 514  GQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +LG+       + R +  ++GK     +  +++GS H    T  G V+TWG N  GQLG
Sbjct: 4045 YRLGHGTNDHVRRPRKVACLQGKQ----IVTVAAGSLHCVACTDAGEVFTWGDNDEGQLG 4100

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             G       PT V  L + ++  V CGS+ + A      I +G   +    ++P  F   
Sbjct: 4101 NGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPIDIGYMPN----QIPVEFNHL 4156

Query: 630  KH 631
             H
Sbjct: 4157 HH 4158



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 25/312 (8%)

Query: 253 PKLLESAVMLDVQNIS--LGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVE 309
           P LL+S + + ++ I+  +  +H   ++ +G V+ WG G  GRLGH    D+   P+LV+
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHG---DIRREPELVK 558

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            L    +  ++CG   + A+T +GE+YTWG  ++G   +G   S    LP  L   L G 
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGR--LGHGNSEDRLLP-TLVAGLSGS 615

Query: 370 RVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            V  VACG  + HT  +   G ++++GDG +G LG G       PK VE+L+        
Sbjct: 616 HVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKH------- 668

Query: 428 CGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
               H   IV+++     S A+G  G ++TWG +D  RLGH   +    P  V  L+++ 
Sbjct: 669 ----HNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYH 724

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
            V  + G    + LT   +++T GS V     +    +   T +   + +EF+ G++ G 
Sbjct: 725 IVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISA-INKEFIAGVACGP 783

Query: 546 YHVAVLTSGGSV 557
               + TSGG +
Sbjct: 784 AQNFLWTSGGKL 795



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 157/347 (45%), Gaps = 52/347 (14%)

Query: 271 AKHAALVTKEGEVFCWG-------EGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           A++  L T + EV  WG       E  DG L           K+ E ++ + ++ + C  
Sbjct: 430 AENYQLSTPKTEVLGWGNINWLGGESNDGSL-----------KIYETVAELGIKQIMCSS 478

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWH 380
               ALT +G +Y+  +N      V             L D+L  +++ K+A    GE H
Sbjct: 479 DNIIALTNNGRVYSLAYNARCEAPV-------------LLDSLIDIKIKKIAANVEGE-H 524

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
              +S+ G ++++G G  G LGHG+++   +P+ V+ L   K+  +ACG  ++AA+    
Sbjct: 525 YLALSSDGCVYSWGSGDGGRLGHGDIRR--EPELVKELVNKKITQIACGSTYSAAVTS-- 580

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVG 498
                     G+L+TWG    GRLGH + E +LLPT V  L     V  +CG     T+ 
Sbjct: 581 ---------NGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLA 631

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE--EFVKGISSGSYHVAVLTSGGS 556
           +   G V++ G   +G+LG   +    +  V   LK   +++  +  GS     L   G+
Sbjct: 632 IDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGT 691

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           V+TWGK+   +LG G       P  VE L +  +  +  G S   A+
Sbjct: 692 VWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLAL 738



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 18/320 (5%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            + + WG    G+LG      V  P + + ++ +   +V+ GE     LT  G++Y    +
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYA---S 3827

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
              G           + +   + + L  +++ K++   G  H  +++++ ++F++GDG  G
Sbjct: 3828 GLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDG 3887

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHG+  +   P+++E+L G ++  ++CG  H+AAI              G+L+TWG  
Sbjct: 3888 KLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITS-----------KGELYTWGKG 3936

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLG 517
              GRLGH DG+  L P  +  L  +  +  +CG     T+ +T    V++ G   +G+LG
Sbjct: 3937 RYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLG 3996

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               +      +    L    V  +  GS     LT  G +YTWGK    +LG G +    
Sbjct: 3997 RGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVR 4056

Query: 578  TPTFVEALRDRQVESVVCGS 597
             P  V  L+ +Q+ +V  GS
Sbjct: 4057 RPRKVACLQGKQIVTVAAGS 4076



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 179/411 (43%), Gaps = 65/411 (15%)

Query: 195 PKNESHRLVTPTYGSPLIERKDILKDVMIWGE-GVLGGDIGGAVDGSVSQNKTQVDALLP 253
           P  E+++L TP              +V+ WG    LGG+   + DGS+            
Sbjct: 428 PTAENYQLSTPK------------TEVLGWGNINWLGGE---SNDGSL------------ 460

Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
           K+ E+   L ++ I   + +   +T  G V+              N     P L++ L  
Sbjct: 461 KIYETVAELGIKQIMCSSDNIIALTNNGRVYSLA----------YNARCEAPVLLDSLID 510

Query: 314 INVQSVSC---GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           I ++ ++    GE    AL+  G +Y+WG  + G    G+ R        +L   L   +
Sbjct: 511 IKIKKIAANVEGE-HYLALSSDGCVYSWGSGDGGRLGHGDIRREP-----ELVKELVNKK 564

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           ++++ACG  ++A V+++G+L+T+G G++G LGHGN ++   P  V  L G  V  VACG 
Sbjct: 565 ITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGS 624

Query: 431 --WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD--F 486
              HT AI     D+       G +++WGD D G+LG    +   +P  V  L   +   
Sbjct: 625 GDAHTLAI-----DK------DGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYI 673

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGS 545
           V   CG   +V L   G V+T G +   +LG+      R   +VEG +    V  I+ G 
Sbjct: 674 VNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD-IAVGP 732

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            H   LT    ++TWG +   +  L        PT + A+    +  V CG
Sbjct: 733 SHCLALTDNCQIFTWGSDVQ-KYALSSDNYNMEPTCISAINKEFIAGVACG 782



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 20/227 (8%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA--ALV 277
            ++  WG+G  G    G  DG         D L PKLLE+     V +++ G+  A    +
Sbjct: 3929 ELYTWGKGRYGR--LGHGDGD--------DCLKPKLLEALKSYKVIDVACGSGDAQTLAI 3978

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T +  V+ WG+G  G+LG   +     P  +E L G+ V  V CG   + ALTK+G++YT
Sbjct: 3979 TDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYT 4038

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  ++    +G   +     PRK+   L G ++  VA G  H    + +G++FT+GD  
Sbjct: 4039 WGKGDYYR--LGHGTNDHVRRPRKV-ACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDND 4095

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACG-----PWHTAAIVDI 439
             G LG+G L  + +P  V  L  +K+  V CG      W T A +DI
Sbjct: 4096 EGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPIDI 4142



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 2/154 (1%)

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            K + WG   +G+LG V G +   P     +        + G      LT  GKVY  G  
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLG 3830

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
              G+LG  ++ +    V+   L+   ++ +S  SG  H  VLTS   V++WG   +G+LG
Sbjct: 3831 GSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             GD    ETP  +EAL  +Q+  + CGSS +AAI
Sbjct: 3891 HGDKLSSETPRKIEALLGKQIVHISCGSSHSAAI 3924



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 4/135 (2%)

Query: 475 PTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
           P  +  L+D     + A+      + L+  G VY+ GS   G+LG+   +     V E  
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKE-- 559

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L  + +  I+ GS + A +TS G +YTWG+ + G+LG G+S++R  PT V  L    V  
Sbjct: 560 LVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVD 619

Query: 593 VVCGSSITAAICLHK 607
           V CGS     + + K
Sbjct: 620 VACGSGDAHTLAIDK 634


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3987 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4033

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4034 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4093

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4094 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4150

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4151 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4200

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4201 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4258

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4259 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4314

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4315 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4346



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3987 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4040

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4089

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4090 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4149

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4150 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4205

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4206 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4243



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3979 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4031

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4032 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4081

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4137

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4190



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4282 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4341

Query: 324  FQTCALT 330
              + A T
Sbjct: 4342 CHSAAWT 4348


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 2451 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 2497

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 2498 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2557

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 2558 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2614

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 2615 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 2664

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 2665 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 2722

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 2723 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 2778

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 2779 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 2810



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 2451 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 2504

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 2553

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 2554 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 2613

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 2614 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 2669

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 2670 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 2707



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 2443 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 2495

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 2496 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 2545

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 2546 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 2604

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 2605 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 2654



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 2735 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 2794

Query: 313  GINVQSVSCGEFQTCALT 330
            G NV+ +S G   + A T
Sbjct: 2795 GKNVRQISAGRCHSAAWT 2812


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 184/350 (52%), Gaps = 24/350 (6%)

Query: 266  NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GE 323
            +I+ G+K   +V+ EG+++  GEG +GRLG   + +V  P+ +  LS   ++ V+   G 
Sbjct: 2931 HIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGG 2990

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
                ALT  G++++WG    G    G R +       K+ + L   ++  +ACG  H+A 
Sbjct: 2991 KHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDK---PKMIEALRSKKIRDIACGSSHSAA 3047

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGP--WHTAAIVDI 439
            +++SG+L+T+G G +G LGHG+  N++Q  PK ++SL G ++  VACG     T A+ D 
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHGD--NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTD- 3104

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                       G +F+WGD D G+LG    E   +P  + RL   + VQ  CG   ++ L
Sbjct: 3105 ----------EGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL 3154

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
            T  G+V+T G   + +LG+   +  R  TV+E  LK++ V  ++ G+ H   +T  G VY
Sbjct: 3155 TKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIE-SLKDKKVIHVAVGALHCLAVTDTGQVY 3213

Query: 559  TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
             WG N +GQ G G +     P  V  L D  +  V CGSS + A  L  +
Sbjct: 3214 AWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQDT 3263



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 153/306 (50%), Gaps = 26/306 (8%)

Query: 250  ALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
             L+P LLES   + ++ I++  G KH   ++ + +V+ WGEG DG+LGH   +    PKL
Sbjct: 3943 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKL 4002

Query: 308  VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
            +E L G  +  ++CG   + A+T +G++YTWG   +G   +G   S     P KL + L 
Sbjct: 4003 IEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR--LGHGDSEDQLKP-KLIEELV 4059

Query: 368  GVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
            G +V  VAC  G+  T  ++    ++++GDG +G LG G       PK++ESL GL V  
Sbjct: 4060 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIK 4119

Query: 426  VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
            V CG   + A+              G ++TWG  D  RLGH  GE    P  V  L    
Sbjct: 4120 VECGSQFSVALTR-----------SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKK 4168

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+V+T G    GQLG    N   + R ++ ++GK     +  +
Sbjct: 4169 IISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGKK----ITNV 4224

Query: 542  SSGSYH 547
            + GS H
Sbjct: 4225 ACGSAH 4230



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 166/343 (48%), Gaps = 24/343 (6%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L ++ I    +   ++T+ G+VF              + D  CP+ +  LSGIN+  ++ 
Sbjct: 471 LTIKQICCSDRTILILTQTGKVFF----------MYYSSDTQCPQEMTGLSGINMIKIAA 520

Query: 322 GE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
                   ALTK  E+Y+WG+ + G    G+  ++       L   L G  +  V CG  
Sbjct: 521 HPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEE---PTLIQALKGKDIIDVECGGT 577

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           ++A +S +G L+T+G G +G LGHG  ++   P  + +L    +  VACG ++   +   
Sbjct: 578 YSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL--- 634

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
               C ++   GK+++WGD D G+LG    +   LP  + +L +   VQ  CG   +V L
Sbjct: 635 ----CITSQ--GKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVAL 688

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           +  G VYT G     +LG+P  ++     +   L++  V G+S G  HV  LT  G VY 
Sbjct: 689 SEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           WGKN N Q+        + P  +EAL+ ++V  V CG + + A
Sbjct: 749 WGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFA 791



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 26/334 (7%)

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGE 334
            VT +G+V+  G G  GRLG      V  P L+E +  + ++  +V+ G     AL+   +
Sbjct: 3918 VTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADND 3977

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +Y+WG  + G    G R +       KL + L G  +  +ACG  H+A ++++GQL+T+G
Sbjct: 3978 VYSWGEGDDGKLGHGNRLACE---TPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWG 4034

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGK 452
             G +G LGHG+ ++  +PK +E L G KV  VACG     T  I D              
Sbjct: 4035 KGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITD-----------DDN 4083

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +++WGD D G+LG    +   +P  +  L     ++  CG   +V LT  G VYT G   
Sbjct: 4084 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGD 4143

Query: 513  HGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            + +LG+       + + +  ++GK     +  I++GS H    +  G V+TWG N  GQL
Sbjct: 4144 YHRLGHGTGEHVRRPKKVAALQGKK----IISIATGSLHCVACSDEGEVFTWGDNDEGQL 4199

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G   +   + P  V AL+ +++ +V CGS+ T A
Sbjct: 4200 GDDTTNAIQRPRLVSALQGKKITNVACGSAHTLA 4233



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 146/283 (51%), Gaps = 28/283 (9%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            V  WGEG          DG +   N+  +D   PK++E+     +++I+ G+ H+A +T 
Sbjct: 3002 VFSWGEGE---------DGKLGHGNRLNLDK--PKMIEALRSKKIRDIACGSSHSAAITS 3050

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYT 337
             GE++ WG G+ GRLGH  N+    PKL++ L G  +  V+CG  + QT ALT  G +++
Sbjct: 3051 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 3110

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  + G   +G   S    +P  + + L+ + V ++ CG   +  ++ +G+++T+G G 
Sbjct: 3111 WGDGDFGK--LGRGGSEGCNIPHNI-ERLNALEVVQIECGAQFSLALTKTGEVWTWGKGD 3167

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +  LGHG+ Q+V +P  +ESL+  KV  VA G  H  A+ D            G+++ WG
Sbjct: 3168 YFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDT-----------GQVYAWG 3216

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            D D G+ G+        P  V  L D    + +CG   ++  T
Sbjct: 3217 DNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT 3259



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 146/304 (48%), Gaps = 30/304 (9%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+  + LS + ++ + C +     LT++G+++   +            S     P+++  
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYY------------SSDTQCPQEM-T 508

Query: 365 TLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            L G+ + K+A    G+ H   ++   +++++G+G  G LGHG+     +P  +++L+G 
Sbjct: 509 GLSGINMIKIAAHPEGK-HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGK 567

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +  V CG  ++AAI           +  G L+TWG  + GRLGH   E  L PT ++ L
Sbjct: 568 DIIDVECGGTYSAAI-----------SANGALYTWGRGNYGRLGHGTAEDCLTPTMISAL 616

Query: 482 VDFDFVQASCGRML--TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            D   ++ +CG     T+ +T  GKVY+ G   +G+LG   +    +  +  KL+   + 
Sbjct: 617 SDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIV 676

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            +  G+     L+  G VYTWGK    +LG    +    P  VE LRDR+V  V  G S 
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736

Query: 600 TAAI 603
             A+
Sbjct: 737 VLAL 740



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 15/194 (7%)

Query: 249  DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
            D L PKL+E  V   V +++ G+  A    +T +  V+ WG+G  G+LG   +     PK
Sbjct: 4048 DQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPK 4107

Query: 307  LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
             +E L+G+ V  V CG   + ALT+SG +YTWG  +     HG    GE   R    P+K
Sbjct: 4108 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGT---GEHVRR----PKK 4160

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            +   L G ++  +A G  H    S  G++FT+GD   G LG      + +P+ V +L+G 
Sbjct: 4161 V-AALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLVSALQGK 4219

Query: 422  KVKSVACGPWHTAA 435
            K+ +VACG  HT A
Sbjct: 4220 KITNVACGSAHTLA 4233



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 67/273 (24%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG G  GG +G   D S  +  T + AL  K        D+ ++  G  ++A ++ 
Sbjct: 535 EVYSWGNGD-GGRLGHG-DTSTKEEPTLIQALKGK--------DIIDVECGGTYSAAISA 584

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF--QTCALTKSGEIYT 337
            G ++ WG G  GRLGH    D   P ++  LS  ++  V+CG F   T  +T  G++Y+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYS 644

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  ++G   +G   S    LPR L + L  V++ +V CG   +  +S  G ++T+G G 
Sbjct: 645 WGDGDYGK--LGRGGSDGSKLPR-LIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGE 701

Query: 398 FGVLGHGNLQNV------------------------------------------------ 409
              LGH   +NV                                                
Sbjct: 702 GWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSS 761

Query: 410 ----SQPKEVESLRGLKVKSVACGPWHTAAIVD 438
                QP+ +E+L+G KV  V CGP  + A  D
Sbjct: 762 ELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 30/279 (10%)

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            ++ WG N+   D +G  +     LP +  D L  +    +A G     IVS  G+L+  G
Sbjct: 2896 VFVWGLNDK--DQLGGMKGSKVKLPVQ-SDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2952

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGGK 452
            +GT G LG G+  NV  P+ +  L    +K VA   G  H  A+            + GK
Sbjct: 2953 EGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMAL-----------TLDGK 3001

Query: 453  LFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            +F+WG+ + G+LGH  G R  L  P  +  L        +CG   +  +T  G++YT G 
Sbjct: 3002 VFSWGEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGL 3059

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKG----ISSGS--YHVAVLTSGGSVYTWGKNA 564
              +G+LG+      +IT ++ KL +  V      ++ GS       LT  G V++WG   
Sbjct: 3060 GEYGRLGH----GDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGD 3115

Query: 565  NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G+LG G S+    P  +E L   +V  + CG+  + A+
Sbjct: 3116 FGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL 3154



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 130/278 (46%), Gaps = 22/278 (7%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+++
Sbjct: 3869 SGTIYGWGHNHRGQ--LGGIEGAKVKIPTPC-EALSTLRPVQLVGGEQTLFAVTADGKVY 3925

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G   +V  P  +ES++ + +K +A         V+     C + +   
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIA---------VNSGGKHCLALSADN 3976

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
             +++WG+ D G+LGH +      P  +  L  ++ +  +CG   +  +T  G++YT G  
Sbjct: 3977 DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKG 4036

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVK------GISSGSYHVAVLTSGGSVYTWGKNAN 565
             +G+LG+  ++D+    ++ KL EE V          SG      +T   +V++WG    
Sbjct: 4037 RYGRLGHGDSEDQ----LKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDY 4092

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG G S   + P  +E+L    V  V CGS  + A+
Sbjct: 4093 GKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 4130



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            +PK +ES   L V  +  G++ +  +T+
Sbjct: 4083 NVWSWGDGDYGKLGRGGSDG----------CKVPKKIESLAGLGVIKVECGSQFSVALTR 4132

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A +  GE++TWG
Sbjct: 4133 SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 4192

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+  + +   PR L   L G +++ VACG  HT   ST+
Sbjct: 4193 DNDEGQ--LGDDTTNAIQRPR-LVSALQGKKITNVACGSAHTLAWSTN 4237



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 2/160 (1%)

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            S+ +G ++F WG  DK +LG + G +  LP     L     +  + G      ++  GK+
Sbjct: 2889 SSTVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKL 2948

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKN 563
            Y  G   +G+LG   + +         L +  +K   + SG  H   LT  G V++WG+ 
Sbjct: 2949 YACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG 3008

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             +G+LG G+    + P  +EALR +++  + CGSS +AAI
Sbjct: 3009 EDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAI 3048



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 15/222 (6%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3869 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAV---------- 3918

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GK++  G    GRLG    +  L+PT +  +  V    +  + G    + L+    
Sbjct: 3919 -TADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADND 3977

Query: 505  VYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            VY+ G    G+LG+  +    +  ++E     E +  I+ G  H A +TS G +YTWGK 
Sbjct: 3978 VYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIID-IACGGAHSAAITSTGQLYTWGKG 4036

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
              G+LG GDS+++  P  +E L   +V  V CGS     +C+
Sbjct: 4037 RYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 4078



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + LT   +VY+ G+   G+LG+     +    +   LK + +  +  G  + A +++ G+
Sbjct: 528 LALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGA 587

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +YTWG+   G+LG G +++  TPT + AL D  +  V CGS     +C+
Sbjct: 588 LYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCI 636



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G          +G    + T+ +   P+++E      V  +SLG  H   +T +
Sbjct: 694 VYTWGKG----------EGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQ 743

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           GEV+ WG+ ++ ++     + V  P+L+E L G  V  V CG  Q+ A T   E
Sbjct: 744 GEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4352

Query: 324  FQTCALT 330
              + A T
Sbjct: 4353 CHSAAWT 4359


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3997 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4043

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4104 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSVVWAF 4210

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4211 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4268

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4269 GLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4325 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4356



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3997 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4099

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4159

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4160 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSVVWAFGDGDY 4215

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3989 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4041

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4042 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4091

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4147

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSV 4206



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4351

Query: 324  FQTCALT 330
              + A T
Sbjct: 4352 CHSAAWT 4358


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4352

Query: 324  FQTCALT 330
              + A T
Sbjct: 4353 CHSAAWT 4359


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGMIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTGLQGKNIRQISAGRCHSAA 4357



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4151

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 41/78 (52%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +     + ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L 
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQ 4341

Query: 313  GINVQSVSCGEFQTCALT 330
            G N++ +S G   + A T
Sbjct: 4342 GKNIRQISAGRCHSAAWT 4359


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3996 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4042

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4103 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4209

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4210 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4267

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4324 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4355



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3996 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4098

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4159 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4214

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4040

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4041 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4146

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4205



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4350

Query: 324  FQTCALT 330
              + A T
Sbjct: 4351 CHSAAWT 4357


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 4007 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4053

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4114 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4220

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4221 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4278

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4279 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4334

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4335 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4366



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 169/357 (47%), Gaps = 22/357 (6%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V++ G   +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 565 NGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              LG G S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 643 C--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 4007 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4060

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4109

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4110 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4169

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4170 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4225

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3999 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4051

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4052 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4101

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4157

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4216



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4302 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4361

Query: 324  FQTCALT 330
              + A T
Sbjct: 4362 CHSAAWT 4368


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 211/453 (46%), Gaps = 40/453 (8%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 3070 QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 3116

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V++EG VF  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 3117 KSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3176

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR++ + L   ++  VACG  H+A +S+ G+
Sbjct: 3177 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PRQV-EALRAKKIRDVACGSSHSAAISSQGE 3233

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 3234 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGS-RDAQTLALTED------- 3285

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     +Q  CG   ++ LT  G+V+T G
Sbjct: 3286 -GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3344

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 3345 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3404

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             G++   + P  V  L D  V  V CGSS + A  L  +    ++       +PFG  R 
Sbjct: 3405 SGNTFVNKKPALVIGLDDVFVNRVACGSSHSIAWGLPNATMEEEKRG----PVPFGSTRD 3460

Query: 630  KHNCYNCGLHFCSACSTKKIINASLTPNKGKPS 662
                 + G++   A      +N +  P+   P+
Sbjct: 3461 PLGGSSLGIYEAEA------VNQTAKPDTKPPT 3487



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4235 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4285

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4286 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4345

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L G+ V+ +ACG  H+A ++ SGQ+ T+G G +G LGHG+ ++
Sbjct: 4346 GNRVSYDR---PKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSED 4402

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4403 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4451

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     ++  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4452 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4511

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 4512 PKKVAALQGK----KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4567

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4568 SALQGKHIVKVTCGSAHTLAL 4588



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 160/312 (51%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   +    PKLVE
Sbjct: 4299 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVE 4358

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L G++V  ++CG   + A+T SG++ TWG   +G   +G   S     P KL + L G 
Sbjct: 4359 HLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4415

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4416 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4475

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4476 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4522

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R ++ ++GK     VK +
Sbjct: 4523 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGK---HIVK-V 4578

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4579 TCGSAHTLALST 4590



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 30/288 (10%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             V+ V C E Q   L++ G+++ W            R S+    P+ L +      +S 
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAW------------RLSKPEAEPQPLEEAGHETFISI 634

Query: 374 VA-CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
              C   H   + ++   +++G G    LGHG+    + P ++ +L    V+SV CG  +
Sbjct: 635 AGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTY 694

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A I             GG L TWG     RLGH + + + LPT V  L +   V  + G
Sbjct: 695 SAVIT-----------CGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALG 743

Query: 493 R--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
                ++ LT  G V+  G   +G+LGN         ++   L    V+ I +GS +   
Sbjct: 744 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRIFAGSQYSVA 801

Query: 551 LTSGGSVYTWGKNA--NGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           L+S G VYTWGK      QL     Q    P  V +L+ +++  +  G
Sbjct: 802 LSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVG 849



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4437 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 4486

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 4487 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4546

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4547 DNDEGQ--LGDGTVTAIQRPR-LVSALQGKHIVKVTCGSAHTLALSTS 4591



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 24/244 (9%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +H   +      + WG G+D RLGH      + P  +  L    VQSV CG   +  +T 
Sbjct: 641 RHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITC 700

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQ 389
            G + TWG   +    +G   S    LP  L   L    V  VA   G+ H+  +++ G 
Sbjct: 701 GGNLLTWGRGTYAR--LGHGNSDDRCLP-TLVAALAEHTVVDVALGSGDAHSLALTSEGL 757

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           +F +GDG +G LG+GN     QP  VESL   +V+ +  G  ++ A+           + 
Sbjct: 758 VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRIFAGSQYSVAL-----------SS 804

Query: 450 GGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            G+++TWG A    LGH   ER +    +P  V+ L     V  + G    + L+  G+V
Sbjct: 805 EGQVYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEV 862

Query: 506 YTMG 509
           +  G
Sbjct: 863 FGWG 866



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 20/240 (8%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           A+  +   Y+WG         G+  +R+  +P K+   L+   V  V CG  ++A+++  
Sbjct: 645 AIDSNHNAYSWGAGEDHRLGHGDTHARA--VPTKI-AALEQHCVQSVFCGCTYSAVITCG 701

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCK 445
           G L T+G GT+  LGHGN  +   P  V +L    V  VA G    H+ A+         
Sbjct: 702 GNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTS------- 754

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G +F WGD D G+LG+ +    L P  V  L     + A  G   +V L+  G+V
Sbjct: 755 ----EGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA--GSQYSVALSSEGQV 808

Query: 506 YTMGSA--VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           YT G A  +  QL     +  S+  +   L+ + +  ++ G  H   L+S G V+ WG+N
Sbjct: 809 YTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRN 868



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 24/203 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           VQ++  G  ++A++T  G +  WG G   RLGH  + D   P LV  L+   V  V+   
Sbjct: 685 VQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGS 744

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  + ALT  G ++ WG  ++G   +G         P  L ++L   RV ++  G  ++
Sbjct: 745 GDAHSLALTSEGLVFAWGDGDYGK--LGNGNCNGSLQP-ILVESLP--RVQRIFAGSQYS 799

Query: 382 AIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             +S+ GQ++T+G  T   LGH     ++Q  S P+ V SL+  ++  +A G        
Sbjct: 800 VALSSEGQVYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVG-------- 849

Query: 438 DIMVDRCKSNAIGGKLFTWGDAD 460
              V  C + +  G++F WG  D
Sbjct: 850 ---VAHCLALSSSGEVFGWGRND 869



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 11/204 (5%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           ++WG  +  RLGH D   + +PT +  L         CG   +  +T  G + T G   +
Sbjct: 653 YSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTY 712

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            +LG+  + DR +  +   L E  V  ++  SG  H   LTS G V+ WG    G+LG G
Sbjct: 713 ARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 772

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
           +      P  VE+L   +V+ +  GS  + A+     +    +++C       G +  + 
Sbjct: 773 NCNGSLQPILVESL--PRVQRIFAGSQYSVALSSEGQVYTWGKATC------LGHQLVER 824

Query: 632 NCYNCGL-HFCSACSTKKIINASL 654
           +   C +    S+   K+I++ ++
Sbjct: 825 SVQGCSVPRLVSSLQHKRIVDMAV 848



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4274

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4275 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4334

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 4335 WGEGEDGKLGHGNRVSYDRP-KLVE-HLHGMSVADIACGSAHSAAITASGQVLTWGKGRY 4392

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 4393 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4452

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 4453 GSDGCKLPY 4461



 Score = 46.6 bits (109), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   + S  + Y+WG   + +LG GD+  R  PT + AL    V+SV CG + +A I
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVI 698


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4357



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 169/357 (47%), Gaps = 22/357 (6%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V++ G   +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 565 NGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              LG G S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 643 C--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4352

Query: 324  FQTCALT 330
              + A T
Sbjct: 4353 CHSAAWT 4359


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4357



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 22/349 (6%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T  ++  G +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSV 424

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T G++F++G
Sbjct: 425 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +            G+L
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----------DGEL 532

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G   
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A   LG G 
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGS 648

Query: 573 SQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 649 SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 68/279 (24%)

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  ++++ E+Y WG N+    + G   ++   L  KL  +    +   +  G++ T ++S
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAPSFSDAQT--IEAGQYCTFVIS 419

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           T G +   G G++G LG G+  N S  K++       +K V+                  
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------------------ 461

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                        + KG  GH                             T+  T  G+V
Sbjct: 462 -------------SSKGSDGH-----------------------------TLAFTTEGEV 479

Query: 506 YTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           ++ G   +G+LG+  +  +    +++G L+ + V  +S+G  H A +T  G +YTWG+  
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG GDS  R  PT V+ + +  V  V CGSS T A+
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4352

Query: 324  FQTCALT 330
              + A T
Sbjct: 4353 CHSAAWT 4359


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3993 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4039

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4100 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4206

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4207 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4264

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4265 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4320

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4321 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 30/353 (8%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T  ++  G +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSV 424

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T G++F++G
Sbjct: 425 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +            G+L
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----------DGEL 532

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G   
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590

Query: 513 HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY WG  A   L
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644

Query: 569 GLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           G G S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 645 GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+         F      +  +V CG+  T ++  +G +   
Sbjct: 3993 DVYLWGAGRHG-QLAEAGRNVMVPAAAPSFS-----QAQQVICGQNCTFVIQANGTVLAC 4046

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4095

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4096 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4155

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4156 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4211

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3985 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4037

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4038 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4087

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4143

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4202



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 68/279 (24%)

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  ++++ E+Y WG N+    + G   ++   L  KL  +    +   +  G++ T ++S
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAPSFSDAQT--IEAGQYCTFVIS 419

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           T G +   G G++G LG G+  N S  K++       +K V+                  
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------------------ 461

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                        + KG  GH                             T+  T  G+V
Sbjct: 462 -------------SSKGSDGH-----------------------------TLAFTTEGEV 479

Query: 506 YTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           ++ G   +G+LG+  +  +    +++G L+ + V  +S+G  H A +T  G +YTWG+  
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG GDS  R  PT V+ + +  V  V CGSS T A+
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4288 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4347

Query: 324  FQTCALT 330
              + A T
Sbjct: 4348 CHSAAWT 4354


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3996 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQAQQVICGQNCTF------VIQA 4042

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4103 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4209

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4210 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4267

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4324 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   ++     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3996 DVYLWGAGRHGQL---AEAGRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4098

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4159 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4214

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C S +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 4040

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4041 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4149

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4199



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4350

Query: 324  FQTCALT 330
              + A T
Sbjct: 4351 CHSAAWT 4357


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3996 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQAQQVICGQNCTF------VIQA 4042

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4103 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4209

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4210 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4267

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4324 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   ++     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3996 DVYLWGAGRHGQL---AEAGRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4098

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4159 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4214

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C S +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 4040

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4041 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4146

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4205



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4350

Query: 324  FQTCALT 330
              + A T
Sbjct: 4351 CHSAAWT 4357


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3997 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4043

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4104 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4210

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4211 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4268

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      + V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4269 GLPEGRARNHNRPQQVPVLAGVVIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4325 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4356



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3997 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4099

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4159

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4160 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4215

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3989 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4041

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4042 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4091

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4150

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4151 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4206



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4351

Query: 324  FQTCALT 330
              + A T
Sbjct: 4352 CHSAAWT 4358


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 173/353 (49%), Gaps = 40/353 (11%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
            Q +  G     ++   G V   GEG  GRLG   + D+    ++  L G  V  +  SCG
Sbjct: 4033 QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4092

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  V +++CG  H+
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4149

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            A+V+  G+LFT+G+G +G LG GN  N   P+ V +L G ++  VACG  HT A+     
Sbjct: 4150 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV----- 4204

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +  G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT 
Sbjct: 4205 -----STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK 4259

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE------------FVKGISSGSYHVA 549
             G VYT G            +DR I + EG+ +              F++ I+ G+ H  
Sbjct: 4260 DGHVYTFG------------QDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTL 4307

Query: 550  VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             L+S G VY WG N+ GQLGLG +     PT V  L+ + V  +  G   +AA
Sbjct: 4308 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4360



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  +++    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 168/365 (46%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLASS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +  + 
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--IN 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P             +V CG+  T ++  +G +   
Sbjct: 4001 DVYLWGAGRHGQL---AEAGRNVMIPAA---APSFSPAQQVVCGQNCTFVIQANGTVLAC 4054

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4103

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4104 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 4163

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + VAV T G  V+ +G    
Sbjct: 4164 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTVAVSTDGSMVWAFGDGDY 4219

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4220 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4257



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 31/250 (12%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +  INV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGH 466
           G+   G+ G 
Sbjct: 690 GNNSMGQCGQ 699



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   +++V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--IINVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S      + V CG   T  I 
Sbjct: 3993 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMIPAAAPSFS--PAQQVVCGQNCTFVI- 4045

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4046 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4095

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4151

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T+ G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV 4204



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            +++I++GA+H   ++  G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4296 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4355

Query: 324  FQTCALT 330
              + A T
Sbjct: 4356 CHSAAWT 4362


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3996 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQAQQVICGQNCTF------VIQA 4042

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4103 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4209

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4210 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4267

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4324 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   ++     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3996 DVYLWGAGRHGQ--LAEA-GRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4098

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4159 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4214

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C S +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 4040

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4041 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4146

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4199



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4350

Query: 324  FQTCALT 330
              + A T
Sbjct: 4351 CHSAAWT 4357


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3965 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4011

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4012 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4071

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4072 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4128

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4129 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4178

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4179 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4236

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4237 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4292

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4293 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4324



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3965 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4018

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4067

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4068 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4127

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4128 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4183

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4184 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4221



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3957 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4009

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4010 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4059

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4118

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4119 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4168



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4260 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4319

Query: 324  FQTCALT 330
              + A T
Sbjct: 4320 CHSAAWT 4326


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 4007 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQAQQVICGQNCTF------VIQA 4053

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4114 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4220

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4221 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4278

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4279 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4334

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4335 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4366



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   ++     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 4007 DVYLWGAGRHGQ--LAEA-GRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 4060

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4109

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4110 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4169

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4170 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4225

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C S +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3999 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 4051

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4052 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4101

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4157

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4210



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4302 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4361

Query: 324  FQTCALT 330
              + A T
Sbjct: 4362 CHSAAWT 4368


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4211

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4212 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4269

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4325

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4326 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4357



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 170/357 (47%), Gaps = 22/357 (6%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PK+   LS  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMA--LSFSDAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V++ G   +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 565 NGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              LG G S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 643 C--LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQC 697



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 165/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PK+  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKMALS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G      L     VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+         F      +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHG-QLAEAGRNVMVPAAAPSFS-----QAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G              C +     +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGD-----------SXCLALRHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+     +    +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4207



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4352

Query: 324  FQTCALT 330
              + A T
Sbjct: 4353 CHSAAWT 4359


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3639 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 3685

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3745

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 3746 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3802

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 3803 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 3852

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 3853 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 3910

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 3911 GLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 3966

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 3967 GHTNHVREPTVVTGLQGKNVRQISAGRCHSAA 3998



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3639 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 3692

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 3741

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 3742 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 3801

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 3802 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 3857

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 3858 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 3895



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3631 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 3683

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 3684 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3733

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 3734 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 3789

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 3848



 Score = 46.6 bits (109), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P +V  L G NV+ +S G 
Sbjct: 3934 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAGR 3993

Query: 324  FQTCALT 330
              + A T
Sbjct: 3994 CHSAAWT 4000


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3996 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQAQQVICGQNCTF------VIQA 4042

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4103 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4209

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4210 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4267

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4323

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4324 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   ++     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3996 DVYLWGAGRHGQL---AEAGRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4098

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4159 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4214

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C S +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 22/230 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 4040

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4041 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 4149

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4199



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4350

Query: 324  FQTCALT 330
              + A T
Sbjct: 4351 CHSAAWT 4357


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 1578 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 1624

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 1625 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1684

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 1685 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1741

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 1742 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 1791

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 1792 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 1849

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 1850 GLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 1905

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 1906 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 1937



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+         F      +  +V CG+  T ++  +G +   
Sbjct: 1578 DVYLWGAGRHG-QLAEAGRNVMVPAAAPSFS-----QAQQVICGQNCTFVIQANGTVLAC 1631

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 1680

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 1681 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 1740

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 1741 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 1796

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 1797 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 1834



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 1570 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 1622

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 1623 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 1672

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 1673 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 1731

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 1732 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 1787



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 1873 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 1932

Query: 324  FQTCALT 330
              + A T
Sbjct: 1933 CHSAAWT 1939


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 2644 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQAQQVICGQNCTF------VIQA 2690

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 2691 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2750

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 2751 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2807

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 2808 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 2857

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 2858 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 2915

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 2916 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 2971

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 2972 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 3003



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 2644 DVYLWGAGRHGQ--LAEA-GRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 2697

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 2746

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 2747 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 2806

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 2807 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 2862

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 2863 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2900



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 2636 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 2688

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 2689 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 2738

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 2794

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 2853



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 2939 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 2998

Query: 324  FQTCALT 330
              + A T
Sbjct: 2999 CHSAAWT 3005


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3983 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4029

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4090 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSVVWAF 4196

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4197 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4254

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4255 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4310

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4311 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4342



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLSLTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3983 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4036

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4085

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4086 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4145

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4146 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSVVWAFGDGDY 4201

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4202 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4239



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + +LT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3975 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4027

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4028 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4077

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4133

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSV 4192



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4278 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4337

Query: 324  FQTCALT 330
              + A T
Sbjct: 4338 CHSAAWT 4344


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3991 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4037

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4098 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-VDIMVDRCKSNAIGGKLFT 455
             +G LG GN  N   P+ V +L G ++  VACG  HT A+ VD           G  ++ 
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVD-----------GSMVWA 4203

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            +GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRL 4261

Query: 516  LGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLG
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLG 4317

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            LG +     PT V  L+ + V  +  G   +AA
Sbjct: 4318 LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4350



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3991 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4044

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4093

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4094 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4153

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4154 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSVDGSMVWAFGDGDY 4209

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3983 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4035

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4036 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4085

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4141

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+ +  S+
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM 4200



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4286 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4345

Query: 324  FQTCALT 330
              + A T
Sbjct: 4346 CHSAAWT 4352


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 4001 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4047

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4108 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4164

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4214

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4215 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4272

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I ++ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4273 GLPEGRARNHNRPQQIPLLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4328

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4329 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4360



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 4001 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4054

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4103

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4104 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4163

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4164 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4219

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4220 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4257



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3993 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4045

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4046 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4095

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4151

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4204



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4296 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4355

Query: 324  FQTCALT 330
              + A T
Sbjct: 4356 CHSAAWT 4362


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3990 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4036

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4097 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSVVWAF 4203

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4204 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4261

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4262 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4317

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4318 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4349



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLSLTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3990 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4043

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4092

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4093 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4152

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4153 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSVVWAFGDGDY 4208

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4209 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4246



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + +LT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3982 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4034

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4035 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4084

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4140

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSV 4199



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4285 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4344

Query: 324  FQTCALT 330
              + A T
Sbjct: 4345 CHSAAWT 4351


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 211/430 (49%), Gaps = 36/430 (8%)

Query: 216  DILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            +I   V++WG   +  LGG  G  V              LP        L   +IS G+K
Sbjct: 2904 EISSKVLVWGLNDKEQLGGLKGSKVK-------------LPTYSSVLSQLKPIHISGGSK 2950

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALT 330
               +V+++G+++  GEG +GRLG   N +V  P+ V  L+   V+ V+   G     ALT
Sbjct: 2951 SLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALT 3010

Query: 331  KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
              G++++WG    G    G R +       KL ++L   R+  +ACG  H+A +++SG+L
Sbjct: 3011 LDGKVFSWGEGEDGKLGHGNRVTLEK---PKLLESLRTKRIRDIACGSSHSAAITSSGEL 3067

Query: 391  FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
            +T+G G +G LGHG+     +PK V +L+G +V  VACG      +       C +    
Sbjct: 3068 YTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTL-------CLTEE-- 3118

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G +F+WGD D G+LG    E   +P  V RL     VQ  CG   ++ LT +G+V+T G 
Sbjct: 3119 GLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGK 3178

Query: 511  AVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              + +LG+   +  R  T ++G L+ + V  ++ G+ H   +T  G V+ WG N +GQ G
Sbjct: 3179 GDYYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3237

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             G++   + P  V  L    V  V CGSS + A  L ++ S  D+       +PF   + 
Sbjct: 3238 SGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSLPQNPSEKDKKE----PVPFAVSKD 3293

Query: 630  KHNCYNCGLH 639
                ++ G++
Sbjct: 3294 PLGSHSLGIY 3303



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 164/364 (45%), Gaps = 57/364 (15%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            +F WG    G+LG      +  P   E LS +    ++ GE    A+T  G++Y  G+  
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4005

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
             G   +G   S S      L ++L  V + KVA   G  H   +S+ G++F++G+G  G 
Sbjct: 4006 GGRLGIGGTDSVS---TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGK 4062

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHGN  +  +PK +E+L G+ V  +ACG  H+A I              G + TWG   
Sbjct: 4063 LGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITS-----------QGHVLTWGKGR 4111

Query: 461  KGRLGHVDGERKLLPT-CVTR--------------------------------LVDFDFV 487
             GRLGH D E +L P  CV R                                L     +
Sbjct: 4112 YGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVI 4171

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISS 543
            +  CG   +V LT  G VYT G   + +LG+       + + +  ++GK     +  I++
Sbjct: 4172 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK----IISIAT 4227

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GS H    +  G V+TWG N  GQLG G     + P  V++L+ + +  V+CGS+ T A+
Sbjct: 4228 GSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4287

Query: 604  CLHK 607
              ++
Sbjct: 4288 STYQ 4291



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 55/296 (18%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P L+ES   + ++ +++  G KH   ++ +GEVF WGEG+DG+LGH        PKL+E 
Sbjct: 4020 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA 4079

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-------- 362
            LSGI V  ++CG   +  +T  G + TWG   +G   +G   S     P++         
Sbjct: 4080 LSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGR--LGHGDSEDQLQPKRCVLRTTIMC 4137

Query: 363  ------------------------FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
                                     ++L G+ V KV CG   +  ++ SG ++T+G G +
Sbjct: 4138 GVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDY 4197

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
              LGHGN  +V +PK+V +L+G K+ S+A G  H  A  D            G++FTWGD
Sbjct: 4198 HRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSD-----------SGEVFTWGD 4246

Query: 459  ADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
             D+G+LG  DG    +  P  V  L     V+  CG   T+ L+     Y +  AV
Sbjct: 4247 NDEGQLG--DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS----TYQLSEAV 4296



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 184/414 (44%), Gaps = 51/414 (12%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           GSV +  T    L P L        V+ ++       +VT  G+++           H  
Sbjct: 518 GSVPRYSTATIELPPSL-------QVRQVACTENSIYIVTTSGQLYSI---------HSS 561

Query: 299 NMDVSCPKLVECLSGINVQSVS--CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             +   PKLVE L G++V  ++  C      AL+ +GE+Y+WG    G   +G   + S 
Sbjct: 562 CAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGR--LGHGDTASK 619

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P K+   L+  +V+ +  G  ++A VS+ G+LFT+G GT+G LGHGN  +   P +V+
Sbjct: 620 EVPTKI--ALEK-QVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQ 676

Query: 417 SLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           +L+  KV  VA G    H+ A+ D           GG LF WGD D G+LG+       L
Sbjct: 677 ALKAYKVVDVALGSGDAHSMAVTD-----------GGLLFAWGDGDFGKLGNGSCNGSPL 725

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
           P  +  +     + +  G   +V L+  G +Y+ G    G+LG+  ++  ++  +   L+
Sbjct: 726 PVQIEGVSSVARIYS--GSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALE 783

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF----VEALRDRQV 590
            + +  ++ GS H   LTS G +Y WG+N   Q  +  S     P      +      ++
Sbjct: 784 GKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQ--ICPSGVSRDPIITTPLLTTPPTLRI 841

Query: 591 ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSAC 644
             + CG++ +   C   ++ V         ++PF     +H         C  C
Sbjct: 842 SGMTCGAAQSIVWCASSTLGVAS-------KIPFVVDLSEHTFRQLDQLLCMVC 888



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 12/123 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +  WG+G  G    G+ +GS           LP  +E      V  I  G++ +  ++ +
Sbjct: 704 LFAWGDGDFGKLGNGSCNGSP----------LPVQIEGVS--SVARIYSGSQFSVALSYD 751

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G ++ WG+G  GRLGH  +   + PKLV  L G  +  V+ G     ALT SGE+Y WG 
Sbjct: 752 GTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGR 811

Query: 341 NNH 343
           N++
Sbjct: 812 NDY 814


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3998 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4044

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4105 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-VDIMVDRCKSNAIGGKLFT 455
             +G LG GN  N   P+ V +L G ++  VACG  HT A+ VD           G  ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVD-----------GSMVWA 4210

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            +GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRL 4268

Query: 516  LGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLG 4324

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            LG +     PT V  L+ + V  +  G   +AA
Sbjct: 4325 LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3998 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4100

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4161 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSVDGSMVWAFGDGDY 4216

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4042

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4043 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4148

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+ +  S+
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM 4207



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4352

Query: 324  FQTCALT 330
              + A T
Sbjct: 4353 CHSAAWT 4359


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3997 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4043

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4104 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4210

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4211 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4268

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      + V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4269 GLPEGRARNHNRPQQVPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4324

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4325 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4356



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+         F      +  +V CG+  T ++  +G +   
Sbjct: 3997 DVYLWGAGRHG-QLAEAGRNVMVPAAAPSFS-----QAQQVICGQNCTFVIQANGTVLAC 4050

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4099

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4159

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4160 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4215

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3989 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4041

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4042 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4091

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4147

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 4206



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4292 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4351

Query: 324  FQTCALT 330
              + A T
Sbjct: 4352 CHSAAWT 4358


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 172/335 (51%), Gaps = 20/335 (5%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SC 321
             Q I  G     ++   G V   GEG  GRLG   + D+    ++  L G  V  +  SC
Sbjct: 3215 AQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSC 3274

Query: 322  G-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  + ++ACG  H
Sbjct: 3275 GSDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEIIQMACGFKH 3331

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +A+VS  G+LFT+G+G +G LG GN  N   P+ V +L G  V  V CG  HT A+    
Sbjct: 3332 SAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAV---- 3387

Query: 441  VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  +A G  ++++GD D G+LG  +   K  P  V  L      +  CG   +V LT
Sbjct: 3388 ------SADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALT 3441

Query: 501  GLGKVYTMGSAVHGQLGNPKAKDRSITVVE--GKLKEEFVKGISSGSYHVAVLTSGGSVY 558
              G+V+T G      +G P+++ R+    +    L+  FV+ +  G+ H   LTS G V+
Sbjct: 3442 KDGRVFTFGQ--ERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVW 3499

Query: 559  TWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
             WG N +GQLG+GD+  R  P  V AL+ + V  V
Sbjct: 3500 AWGSNGDGQLGIGDTNARREPCLVTALQGKNVRQV 3534



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 143/278 (51%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            E Y WG   HG   + E   RS   P     T    +  ++ CG+  T ++  +G +   
Sbjct: 3184 EAYMWGGGRHGQ--LAET-GRSLLTPTV---TPSFSQAQQIICGQNCTFVIQANGTVQAC 3237

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++ Q   + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 3238 GEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTE-----------S 3286

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + +Q +CG   +  ++  GK++T G+
Sbjct: 3287 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGN 3346

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG++  +   G++   + +AV   G +V+++G    
Sbjct: 3347 GDYGRLGLGNTSNKKIPER-VTALEGQMVGQVGCGLN---HTLAVSADGNTVWSFGDGDY 3402

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + TP  V+ L    V+ V CG+  + A+
Sbjct: 3403 GKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 63/317 (19%)

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H+  +T+ GEVF WG+G  G+LGH  +     P+ +E L G  +  ++CG   +  ++  
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSAD 3338

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-LF 391
            G+++T+G+ ++G   +G   ++   +P ++   L+G  V +V CG  HT  VS  G  ++
Sbjct: 3339 GKLFTFGNGDYGRLGLGNTSNKK--IPERV-TALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV-------------- 437
            ++GDG +G LG GN    S P+ V+ L G+ VK V CG   + A+               
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLI 3455

Query: 438  -------------------------DIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGE 470
                                     D++V    S A+   G+++ WG    G+LG  D  
Sbjct: 3456 GQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTN 3515

Query: 471  RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
             +  P  VT                   L G       GS   GQLG      R    + 
Sbjct: 3516 ARREPCLVT------------------ALQGKNVRQVWGSNGDGQLGIGDTNARREPCLV 3557

Query: 531  GKLKEEFVKGISSGSYH 547
              L+ + V+ IS+G  H
Sbjct: 3558 TDLQGKNVRQISAGRNH 3574


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 173/353 (49%), Gaps = 40/353 (11%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
            Q +  G     ++   G V   GEG  GRLG   + D+    ++  L G  V  +  SCG
Sbjct: 4029 QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4088

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  V +++CG  H+
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4145

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            A+V+  G+LFT+G+G +G LG GN  N   P+ V +L G ++  VACG  HT A+     
Sbjct: 4146 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV----- 4200

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +  G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT 
Sbjct: 4201 -----STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK 4255

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE------------FVKGISSGSYHVA 549
             G VYT G            +DR I + EG+ +              F++ I+ G+ H  
Sbjct: 4256 DGHVYTFG------------QDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTL 4303

Query: 550  VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             L+S G VY WG N+ GQLGLG +     PT +  L+ + +  +  G   +AA
Sbjct: 4304 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAA 4356



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+    +    F      +  +V CG+  T ++  +G +   
Sbjct: 3997 DVYLWGAGRHG-QLAEAGRNVMVPVAAPSFS-----QAQQVVCGQNCTFVIQANGTVLAC 4050

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4099

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 4159

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + VAV T G  V+ +G    
Sbjct: 4160 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTVAVSTDGSMVWAFGDGDY 4215

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4253



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDR 740



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3989 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPVAAPSFS--QAQQVVCGQNCTFVI- 4041

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4042 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4091

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4147

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +T+ G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSM 4206



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            +++I++GA+H   ++  G+V+ WG   +G+LG      V  P L+  L G N++ +S G 
Sbjct: 4292 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGR 4351

Query: 324  FQTCALT 330
              + A T
Sbjct: 4352 CHSAAWT 4358


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     + A  P   ++  ++  QN +       ++  
Sbjct: 3927 DVYLWGAGRHG-------QLAEAGRNVMIPAAAPSFSQAQQVICGQNCTF------VIQA 3973

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 3974 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4033

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4034 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4090

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4091 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4140

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4141 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4198

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    I+ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4199 GLPEGRARNHNRPQQIPVLAGVVIED----IAVGAEHTLALASTGDVYAWGSNSEGQLGL 4254

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT +  L+ + +  +  G   +AA
Sbjct: 4255 GHTNHVREPTLITILQGKNIRQISAGRCHSAA 4286



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3927 DVYLWGAGRHGQ--LAEA-GRNVMIPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 3980

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4029

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + +Q SCG   +  +T  GK++T G+
Sbjct: 4030 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGN 4089

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4090 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4145

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4146 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4183



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPR 738



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDR 740



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3919 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMIPAAAPSFS--QAQQVICGQNCTFVI- 3971

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 3972 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4021

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE ++ +S G  H AV
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVIQ-MSCGFKHSAV 4077

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4130



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            +++I++GA+H   +   G+V+ WG   +G+LG      V  P L+  L G N++ +S G 
Sbjct: 4222 IEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQISAGR 4281

Query: 324  FQTCALTKS 332
              + A T S
Sbjct: 4282 CHSAAWTAS 4290


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 1609 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 1655

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 1656 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1715

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 1716 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1772

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 1773 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 1822

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 1823 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 1880

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 1881 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 1936

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 1937 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 1968



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+         F      +  +V CG+  T ++  +G +   
Sbjct: 1609 DVYLWGAGRHG-QLAEAGRNVMVPAAAPSFS-----QAQQVICGQNCTFVIQANGTVLAC 1662

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 1711

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 1712 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 1771

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 1772 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 1827

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 1828 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 1865



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 1601 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 1653

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 1654 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 1703

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 1762

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 1763 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM 1818



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 1904 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 1963

Query: 324  FQTCALT 330
              + A T
Sbjct: 1964 CHSAAWT 1970


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 31/337 (9%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEIYTWGHN 341
           V+ WG G +G LGH  ++D+  P++VE L   N++ ++CG     AL  + G++Y+WG  
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST---SGQLFTYGDGTF 398
            +G  ++G+   RS + P K+  +     V  ++C E H A V++   +G ++++GD + 
Sbjct: 61  KYG--ILGQGNLRSRFAPLKI-ASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             LG G+ +  ++P+ V  L    +  VACG +H+AA+           +  G LF WG 
Sbjct: 118 SQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAAL-----------SAKGNLFLWGL 166

Query: 459 ADKGRLGHVDGERKLLPTCV------TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            D G+LG  +      PT +       +++D      +CG + T  LT  G VY  GS +
Sbjct: 167 GDDGQLGLGNYNLSTEPTILHIGEKKAKVMD-----VACGDLHTCILTVGGLVYAFGSNI 221

Query: 513 HGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           +GQ+  P      +   +     + FV  +S GS+H A +T  G +Y WG   +G+LGLG
Sbjct: 222 YGQIAAPSMNKFHLPYRISFNTSKRFVS-VSCGSFHSAAITENGKLYAWGLETDGRLGLG 280

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           D ++R +PT VE  RD+++  + CGS  TAA+ +  S
Sbjct: 281 DCKQRSSPTEVEGFRDKKIGRIACGSKHTAALIILSS 317



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 156/337 (46%), Gaps = 31/337 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTK 279
           V  WG G+  G +G   D         +D   P+++E+ +  +++ ++ G     AL  +
Sbjct: 1   VYTWGSGI-NGALGHGED---------IDIPSPRVVEALLAYNIKRLACGLHTVFALNAE 50

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA---LTKSGEIY 336
           +G+V+ WG GK G LG         P  +      NV  +SC E    A   +T +G +Y
Sbjct: 51  DGKVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVY 110

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           ++G N++    VG+      +   +L   L+   + KVACG++H+A +S  G LF +G G
Sbjct: 111 SFGDNSNSQLGVGDTEP---YAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLG 167

Query: 397 TFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LG GN    ++P  +    +  KV  VACG  HT  +            +GG ++ 
Sbjct: 168 DDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILT-----------VGGLVYA 216

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G++      +  LP  ++      FV  SCG   +  +T  GK+Y  G    G+
Sbjct: 217 FGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGR 276

Query: 516 LGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVL 551
           LG    K RS  T VEG  +++ +  I+ GS H A L
Sbjct: 277 LGLGDCKQRSSPTEVEG-FRDKKIGRIACGSKHTAAL 312


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3995 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4041

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4042 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4101

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4102 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4158

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          ++ G  ++ +
Sbjct: 4159 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SSDGSMVWAF 4208

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4209 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4266

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4267 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4322

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4323 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4354



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A LV++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPLVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    +R VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIRKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3995 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4048

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4097

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4098 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4157

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV + G  V+ +G    
Sbjct: 4158 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSSDGSMVWAFGDGDY 4213

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4214 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4251



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3987 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4039

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4040 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4089

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4145

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4198



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4290 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4349

Query: 324  FQTCALT 330
              + A T
Sbjct: 4350 CHSAAWT 4356


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3935 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 3981

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4041

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4042 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4098

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-VDIMVDRCKSNAIGGKLFT 455
             +G LG GN  N   P+ V +L G ++  VACG  HT A+ VD           G  ++ 
Sbjct: 4099 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVD-----------GSMVWA 4147

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            +GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      
Sbjct: 4148 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRL 4205

Query: 516  LGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLG
Sbjct: 4206 IGLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLG 4261

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            LG +     PT V  L+ + V  +  G   +AA
Sbjct: 4262 LGHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4294



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3935 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 3988

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4037

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4038 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4097

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4098 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSVDGSMVWAFGDGDY 4153

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4154 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4191



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3927 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 3979

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 3980 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4029

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4085

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+ +  S+
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM 4144



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4230 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4289

Query: 324  FQTCALT 330
              + A T
Sbjct: 4290 CHSAAWT 4296


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 192/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     + A  P   ++  ++  QN +       ++  
Sbjct: 4002 DVYLWGAGRHG-------QLAEAGRNVMIPAAAPSFSQAQQVICGQNCTF------VIQA 4048

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4049 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4108

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4109 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4165

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4166 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4215

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4216 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4273

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4274 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 4329

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT +  L+ + +  +  G   +AA
Sbjct: 4330 GHTNHVREPTLITVLQGKNIRQISAGRCHSAA 4361



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    + +VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A VS  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 4002 DVYLWGAGRHGQ--LAEA-GRNVMIPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4055

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4104

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + +Q SCG   +  +T  GK++T G+
Sbjct: 4105 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGN 4164

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4165 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4220

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4221 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4258



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDR 740



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 28/233 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3994 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMIPAAAPSFS--QAQQVICGQNCTFVI- 4046

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4047 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4096

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE ++ +S G  H AV
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVIQ-MSCGFKHSAV 4152

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4205



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P L+  L G N++ +S G 
Sbjct: 4297 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGR 4356

Query: 324  FQTCALTKS 332
              + A T S
Sbjct: 4357 CHSAAWTAS 4365


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 189/386 (48%), Gaps = 29/386 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G   G +  A   +VS   +      P   ++  ++  QN +       ++  
Sbjct: 4089 DVFLWGAG-RHGQLAEAGRNAVSPPPS------PSFCQAQQVICGQNCTF------VIQA 4135

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4136 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4195

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V+  G+LFT+G+G
Sbjct: 4196 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4252

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT  +          +  G  ++ +
Sbjct: 4253 DYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVV----------STDGSMVWAF 4302

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      L
Sbjct: 4303 GDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4362

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
               +A++ +       L   FV+ I+ G+ H   L++ G VY WG N+ GQLGLG +   
Sbjct: 4363 PEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHV 4422

Query: 577  ETPTFVEALRDRQVESVVCGSSITAA 602
              PT V +L+ + V  +  G   +AA
Sbjct: 4423 REPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 170/355 (47%), Gaps = 30/355 (8%)

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T  ++  G
Sbjct: 367 APVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDG 424

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFT 392
            +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T G++F+
Sbjct: 425 SVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 483

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           +GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +            G
Sbjct: 484 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----------DG 532

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGS 510
           +L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G 
Sbjct: 533 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGG 590

Query: 511 AVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY WG  A  
Sbjct: 591 GDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAWGCGAC- 645

Query: 567 QLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
            LG G S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 646 -LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 699



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 391 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 448

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 449 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 506

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 507 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 564

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 565 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 614

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 615 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 669

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 670 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGT 729

Query: 598 SITAA 602
           S + A
Sbjct: 730 SHSLA 734



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 28/288 (9%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTK 331
           H    T EGEVF WG+G  G+LGH  +     PKL++  L G  V  VS G   + A+T+
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-L 390
            GE+YTWG  + G   +G   S S  +P  + D  +   V +V+CG  HT  +S  G+ +
Sbjct: 531 DGELYTWGEGDFGR--LGHGDSNSRNIPTLVKDISN---VGEVSCGSSHTIALSKDGRTV 585

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +++G G  G LGHG+   V +PK +E+L+G+ ++ V  G   + A+              
Sbjct: 586 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST----------- 634

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+++ WG       G  +    L P  +  L     V  S G    + L+   +VY  G+
Sbjct: 635 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN 693

Query: 511 AVHGQLGN-----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
              GQ G      P  K + ++ ++G      ++ IS+G+ H    T+
Sbjct: 694 NSMGQCGQGNSTGPITKPKKVSGLDGVA----IQQISAGTSHSLAWTA 737



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 136/274 (49%), Gaps = 21/274 (7%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG   HG  L    R+     P   F      +  +V CG+  T ++  +G +   
Sbjct: 4089 DVFLWGAGRHG-QLAEAGRNAVSPPPSPSF-----CQAQQVICGQNCTFVIQANGTVLAC 4142

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4191

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4192 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 4251

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS-VYTWGKNANGQLG 569
              +G+LG     ++ +      L+   +  ++ G  H  V+++ GS V+ +G    G+LG
Sbjct: 4252 GDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4312 LGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4345



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 480 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 529

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 530 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 587

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 588 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 643

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 644 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 691

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 692 GNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPR 740



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 533 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 579

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 580 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 639

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 640 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 695

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 696 MGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDR 742



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 24/242 (9%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     +F +G G  G L       VS P    S    + + V CG   T  I 
Sbjct: 4081 DWH---LGGKCDVFLWGAGRHGQLAEAGRNAVSPPP---SPSFCQAQQVICGQNCTFVI- 4133

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4134 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4183

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+T+
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTA 4242

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
             G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T  +    S+  + 
Sbjct: 4243 DGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAF 4302

Query: 612  GD 613
            GD
Sbjct: 4303 GD 4304


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 183/380 (48%), Gaps = 29/380 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G   G           T  +  LP L  +  +   Q +  G   + L+  
Sbjct: 3682 DVYLWGNGRYGQLAG-----------TGTNLTLPTL--APCLSQTQQVVCGQNCSFLIQS 3728

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG+ GRLG   + D+  P ++    G  V  +  SCG +  + ALT++GE++
Sbjct: 3729 NGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3788

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  + G   +G   +     P+++ + L G  V ++ACG  H+A+V+  G+LFT+G G
Sbjct: 3789 SWGDGDFGK--LGHGNNERQRRPKQI-EALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3845

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              G LG  +  N  QP+ V +L G  V  V+CG  HT  +          +  G  ++ +
Sbjct: 3846 ESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVL----------SLDGMAVWAF 3895

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG      K  P  V +L +    +  CG   +V L   G VYT G      L
Sbjct: 3896 GDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGL 3955

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             +   K+RS   V   L+  F++ I+ G  HV  L+S G +Y WG N+ GQLGLG     
Sbjct: 3956 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLV 4015

Query: 577  ETPTFVEALRDRQVESVVCG 596
            + PT + AL+ + ++ +  G
Sbjct: 4016 KEPTLITALQGKNIKQISAG 4035



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 158/356 (44%), Gaps = 21/356 (5%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           LLPKL +     D Q I  G      V+ +G V   G+G  GRLG   + + S PK +  
Sbjct: 360 LLPKLTQG--FSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVL 417

Query: 311 LSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
               N++ V      +  T A+T  GE+++WG   +G   +G   S +   P+ +   L 
Sbjct: 418 EPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGK--LGHGNSATQKYPKIVQGPLF 475

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
              V   + G  H+A V+  G+L+T+G+G FG LGH + Q+ + P  V+ + G  V  VA
Sbjct: 476 SKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISG--VGQVA 533

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HT A+             G  ++++G  D G+LGH D  R   P  +  L  F   
Sbjct: 534 CGSSHTIAVAQD----------GRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIR 583

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           +   G   ++ LT  G+V+  G       G+ +        VE  L    +  IS G  H
Sbjct: 584 KVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSH 642

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
              L+    VY WG N  GQ G G +    T P  V  L    ++ +  G+S + A
Sbjct: 643 CLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA 698



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 182/413 (44%), Gaps = 31/413 (7%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           LK ++ W EG  G  I   V    +    Q+      L E    L    +   +   A  
Sbjct: 272 LKFLLEWVEGFSGESINTQVLKKDADGLCQLSQAALCLFEEICNLASYCLCSSSADTACP 331

Query: 278 TKEGE---VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
             +G+   V+ WG     +L       +  PKL +  S  + Q++  G++ T +++  G 
Sbjct: 332 GTDGDAVTVYVWGSNSSHQLAEGTLEKILLPKLTQGFS--DAQTIEAGQYCTFSVSTDGS 389

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLF----DTLDGVRVSKVACGEWHTAIVSTSGQL 390
           +   G  ++G   +G+  ++S  +P+KL       +  V  SK + G  HT  ++  G++
Sbjct: 390 VKACGKGSYGRLGLGDSNNQS--MPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEV 445

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           F++GDG +G LGHGN      PK V+  L    V S + G  H+AA+ +           
Sbjct: 446 FSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTN----------- 494

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTM 508
            G+L+TWG+ D GRLGH D + +  PT V  +      Q +CG   T+ +   G+ +++ 
Sbjct: 495 DGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG--QVACGSSHTIAVAQDGRTMWSF 552

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G   +G+LG+          V   L    ++ + +GS     LTS G V+ WG      L
Sbjct: 553 GGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG--CGSCL 610

Query: 569 GLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           G G S+     P FVE L   ++  + CG S   A+     +     ++  QC
Sbjct: 611 GCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQC 663



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 132/288 (45%), Gaps = 26/288 (9%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTCALT 330
           H   +T +GEVF WG+G+ G+LGH  +     PK+V+    S I V S S G   + A+T
Sbjct: 435 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVT 493

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ- 389
             GE+YTWG  + G   +G   S+S   P  L   + GV   +VACG  HT  V+  G+ 
Sbjct: 494 NDGELYTWGEGDFGR--LGHSDSQSRNTP-TLVKDISGV--GQVACGSSHTIAVAQDGRT 548

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           ++++G G  G LGHG+   V +PK +E+L G  ++ V  G   + A+             
Sbjct: 549 MWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTS----------- 597

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY--- 506
            G++F WG       G  +    L P  V  L     +  SCG    + L+   +VY   
Sbjct: 598 AGQVFAWGCGSCLGCGSSE-TTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWG 656

Query: 507 --TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
             TMG    G    P  + + +  +EG   ++   G S      AV T
Sbjct: 657 NNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPT 704



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 21/274 (7%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG+  +G  L G   + +  LP  L   L   +  +V CG+  + ++ ++G +   
Sbjct: 3682 DVYLWGNGRYG-QLAGTGTNLT--LP-TLAPCLS--QTQQVVCGQNCSFLIQSNGAVMAV 3735

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G +G LG GN  ++  P  + + +G  V  +  +CG   H+ A+ +            
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTET----------- 3784

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + ER+  P  +  L   D VQ +CG   +  +T  GK++T GS
Sbjct: 3785 GEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGS 3844

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT-SGGSVYTWGKNANGQLG 569
               G+LG     ++        L+   V  +S G  H  VL+  G +V+ +G    G+LG
Sbjct: 3845 GESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3904

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S  +  P  VE L ++ ++ V CG+  +  +
Sbjct: 3905 AGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVL 3938



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 29/249 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+G  G  +G     +    K     L  K++ SA        S G +H+A VT 
Sbjct: 444 EVFSWGDGEYG-KLGHGNSATQKYPKIVQGPLFSKIVVSA--------SAGYRHSAAVTN 494

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
           +GE++ WGEG  GRLGH  +   + P LV+ +SG+    V+CG   T A+ + G  ++++
Sbjct: 495 DGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG--QVACGSSHTIAVAQDGRTMWSF 552

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  ++G   +G   +   + P K+ + L G  + KV  G   +  ++++GQ+F +G G+ 
Sbjct: 553 GGGDNGK--LGHGDTNRVYRP-KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS- 608

Query: 399 GVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
             LG G+ +  S +P+ VE L   K+  ++CG  H           C + +   +++ WG
Sbjct: 609 -CLGCGSSETTSLRPRFVEDLSITKIIDISCGDSH-----------CLALSHENEVYAWG 656

Query: 458 DADKGRLGH 466
           +   G+ G 
Sbjct: 657 NNTMGQCGQ 665



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 111/226 (49%), Gaps = 18/226 (7%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           ++  WGEG  G      +  S SQ++       P L++   +  V  ++ G+ H   V +
Sbjct: 497 ELYTWGEGDFG-----RLGHSDSQSRNT-----PTLVKD--ISGVGQVACGSSHTIAVAQ 544

Query: 280 EGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           +G  ++ +G G +G+LGH     V  PK++E L G  ++ V  G   + ALT +G+++ W
Sbjct: 545 DGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAW 604

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G        +G   S +  L  +  + L   ++  ++CG+ H   +S   +++ +G+ T 
Sbjct: 605 G----CGSCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 660

Query: 399 GVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           G  G G+    +++PK+V  L G+ ++ +  G  H+ A   +  DR
Sbjct: 661 GQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 706



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 19/220 (8%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G+G +G L  G   N++ P     L   + + V CG   +  I        +SN  
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCLS--QTQQVVCGQNCSFLI--------QSN-- 3729

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-MLTVGLTGLGKVY 506
             G +   G+   GRLG  + +   +PT ++    +   Q   SCG    ++ LT  G+V+
Sbjct: 3730 -GAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3788

Query: 507  TMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            + G    G+LG+    + R    +E    E+ V+ ++ G  H AV+T+ G ++T+G   +
Sbjct: 3789 SWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQ-LACGFRHSAVVTADGKLFTFGSGES 3847

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG   +  +  P  V AL    V  V CG + T  + L
Sbjct: 3848 GRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSL 3887



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 10/160 (6%)

Query: 450  GGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
            GGK  ++ WG+   G+L    G    LPT    L      Q  CG+  +  +   G V  
Sbjct: 3678 GGKSDVYLWGNGRYGQLAGT-GTNLTLPTLAPCLSQTQ--QVVCGQNCSFLIQSNGAVMA 3734

Query: 508  MGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +G   +G+LG   + D      I+  +G +  + V    S  + +A LT  G V++WG  
Sbjct: 3735 VGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMA-LTETGEVFSWGDG 3793

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G+++ +  P  +EAL+   V  + CG   +A +
Sbjct: 3794 DFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVV 3833


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 191/392 (48%), Gaps = 41/392 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3997 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4043

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4104 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +  G  ++ +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------STDGSMVWAF 4210

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 4211 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4268

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4269 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4324

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + +  +  G   +AA
Sbjct: 4325 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 4356



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  VE L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLVEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3997 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4099

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4159

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV T G  V+ +G    
Sbjct: 4160 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSTDGSMVWAFGDGDY 4215

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK VE L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLVEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3989 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4041

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4042 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4091

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4147

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSM 4206



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 4351

Query: 324  FQTCALT 330
              + A T
Sbjct: 4352 CHSAAWT 4358


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 173/353 (49%), Gaps = 40/353 (11%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
            Q +  G     ++   G V   GEG  GRLG   + D+    ++  L G  V  +  SCG
Sbjct: 3503 QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 3562

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  V +++CG  H+
Sbjct: 3563 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 3619

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            A+V+  G+LFT+G+G +G LG GN  N   P+ V +L G ++  VACG  HT A+     
Sbjct: 3620 AVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV----- 3674

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +  G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT 
Sbjct: 3675 -----SMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTK 3729

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE------------FVKGISSGSYHVA 549
             G VYT G            +DR I + EG+ +              F++ I+ G+ H  
Sbjct: 3730 DGHVYTFG------------QDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTL 3777

Query: 550  VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             L+S G VY WG N+ GQLGLG +     PT +  L+ + +  +  G   +AA
Sbjct: 3778 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAA 3830



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 138/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG  L    R+    +    F      +  +V CG+  T ++  +G +   
Sbjct: 3471 DVYLWGAGRHG-QLAEAGRNVMVPVAAPSFS-----QAQQVVCGQNCTFVIQANGTVLAC 3524

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 3573

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 3574 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGN 3633

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + VAV   G  V+ +G    
Sbjct: 3634 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTVAVSMDGSMVWAFGDGDY 3689

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 3690 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 3727



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPR 738



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDR 740



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 30/245 (12%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3463 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPVAAPSFS--QAQQVVCGQNCTFVI- 3515

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 3516 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3565

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 3566 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 3621

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI- 609
            +T+ G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+ +  S+ 
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMV 3681

Query: 610  -SVGD 613
             + GD
Sbjct: 3682 WAFGD 3686



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            +++I++GA+H   ++  G+V+ WG   +G+LG      V  P L+  L G N++ +S G 
Sbjct: 3766 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGR 3825

Query: 324  FQTCALT 330
              + A T
Sbjct: 3826 CHSAAWT 3832


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 210/430 (48%), Gaps = 36/430 (8%)

Query: 216  DILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            +I   V++WG   +  LGG  G  V              LP        L   +I+ G+K
Sbjct: 2889 EISSKVLVWGLNDKEQLGGLKGSKVK-------------LPTYSSVLSQLKPIHIAGGSK 2935

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALT 330
               +V+++G+++  GEG +GRLG   N +V  P+ V  L+   V+ V+   G     ALT
Sbjct: 2936 SLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALT 2995

Query: 331  KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
              G++++WG    G    G R +       KL ++L   RV  +ACG  H+A +++SG+L
Sbjct: 2996 LDGKVFSWGEGEDGKLGHGNRLTLEK---PKLIESLRTKRVRDIACGSSHSAAITSSGEL 3052

Query: 391  FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
            +T+G G +G LGHG+     +PK V +L+G +V  VACG      +       C +    
Sbjct: 3053 YTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTL-------CLTEE-- 3103

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G +F+WGD D G+LG    E   +P  V RL     +Q  CG   ++ LT  G+V+T G 
Sbjct: 3104 GLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGK 3163

Query: 511  AVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              + +LG+   +  R  T ++G L+ + V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 3164 GDYYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3222

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             G++   + P  V  L    V  V CGSS + A  L ++ S  D+       +PF   + 
Sbjct: 3223 SGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSLPQNPSEKDKKE----PVPFAVSKD 3278

Query: 630  KHNCYNCGLH 639
                ++ G+H
Sbjct: 3279 PLGGHSLGIH 3288



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 253/541 (46%), Gaps = 65/541 (12%)

Query: 86   RTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDATELSQVRSLCGSPSLSLSERCFSDG 145
            R  S +R  + +   V+ PA++         LE   +L ++ S   +PSL       ++ 
Sbjct: 3811 RYCSAVRVAQSLIRRVTLPATFT--------LEVRKKLLEIASPATNPSLP---NTGANS 3859

Query: 146  LSYSSDSFYSSESSSSQI-QNLSNIITPSSPHMETENFMKWELNYADTRCPKNESHRLVT 204
            L+ S+ S     +S S + Q    + + S+P  E E+         DT    +E H   T
Sbjct: 3860 LTSSNCSLIQHTNSGSNLSQQGFELNSSSAPGSEIESI--------DTSKYLHEDHNYFT 3911

Query: 205  PTYGSPLIERKDILKD--VMIWGEG--VLG------GDIGGAVDGSVSQNKTQVDALLPK 254
            P Y S L++  +   +     WG    + G      G +GG +DGS  +  T  +AL   
Sbjct: 3912 PQYDSQLLQWFNRRPEDWAFSWGGASTIFGWGHNHRGQLGG-LDGSRIKMPTPCEAL--- 3967

Query: 255  LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
                +++  +Q I+ G +    VT +G+++  G G  GRLG      VS P LVE L  +
Sbjct: 3968 ----SLLRPIQ-IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHV 4022

Query: 315  NVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             ++  +V+ G     AL+  GE+++WG    G    G R S       KL + L G+ V 
Sbjct: 4023 IIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDR---PKLIEALSGIGVI 4079

Query: 373  KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP-- 430
             +ACG  H+A +++ G + T+G G +G LGHG+ ++  QPK VE+L G +   +ACG   
Sbjct: 4080 DIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGD 4139

Query: 431  WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
              T  I D              +++WGD D G+LG    +   +P  +  L     ++  
Sbjct: 4140 AQTLCITD-----------DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE 4188

Query: 491  CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSY 546
            CG   +V LT  G VYT G   + +LG+       + + +  ++GK     +  I++GS 
Sbjct: 4189 CGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK----IISIATGSL 4244

Query: 547  HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH 606
            H    +  G V+TWG N  GQLG G     + P  V++L+ + +  V+CGS+ T A+  +
Sbjct: 4245 HCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4304

Query: 607  K 607
            +
Sbjct: 4305 Q 4305



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 29/295 (9%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           +E  S + V+ V+C E     LT  G++++  H+N   ++             K F+ L+
Sbjct: 517 IELPSTLQVRQVACTENNIYILTTGGQVFSL-HSNSSENIA-----------PKAFEGLE 564

Query: 368 GVRVSKVA--CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           GV V ++A  C   H  ++S++ +++++G G  G LGHG+  +   P  +  L   +V  
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           + CG  ++AAI            I G+LFTWG    GRLGH + + KL+PT V  L  + 
Sbjct: 625 IYCGASYSAAI-----------TIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYK 673

Query: 486 FVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
            V  + G     ++ +T  G ++  G    G+LGN       I V    L    V  I S
Sbjct: 674 VVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN--VSRIYS 731

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
           GS     L+  G++YTWGK   G+LG G+S+    P  V AL  +++  V  GS+
Sbjct: 732 GSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSA 786



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 185/416 (44%), Gaps = 44/416 (10%)

Query: 242 SQNKTQVDALLPKL----LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           +   TQ+   +P+     +E    L V+ ++    +  ++T  G+VF           H 
Sbjct: 499 TNGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSL---------HS 549

Query: 298 VNMDVSCPKLVECLSGINVQSVS--CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            + +   PK  E L G++V  ++  C       L+ + E+++WG  + G    G+  S+ 
Sbjct: 550 NSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKE 609

Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           H     +   L   +V  + CG  ++A ++ +G+LFT+G GT+G LGHGN  +   P +V
Sbjct: 610 H---PTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQV 666

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
           ++L+  KV  VA G    H+  + D            G LF WGD D G+LG+       
Sbjct: 667 QALKSYKVVDVALGSGDAHSMCVTD-----------NGLLFAWGDGDFGKLGNGSCNGSP 715

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
           +P  +  LV+   + +  G   +V L+  G +YT G    G+LG+  ++  ++  +   L
Sbjct: 716 IPVQIDTLVNVSRIYS--GSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRAL 773

Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL---GLGDSQERETPTFVEALRDRQV 590
           + + +  ++ GS H   LTS G +Y WG+N   Q+   G+       +P        R +
Sbjct: 774 EGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLR-I 832

Query: 591 ESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACST 646
             + CG++ +   C   ++ V         ++PF     +H         C  C++
Sbjct: 833 SGMTCGAAQSIVWCHSSTLGVAS-------KIPFVVDLSEHTFRMLDQLLCMVCNS 881



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 114/243 (46%), Gaps = 28/243 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG G  GG +G   D    ++ T +  L  K         V  I  GA ++A +T 
Sbjct: 588 EVWSWGAGD-GGRLGHG-DTVSKEHPTMIVGLHEK--------QVCGIYCGASYSAAITI 637

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
            GE+F WG G  GRLGH  + D   P  V+ L    V  V+   G+  +  +T +G ++ 
Sbjct: 638 AGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFA 697

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  + G   +G        +P ++ DTL  V VS++  G   +  +S  G L+T+G G 
Sbjct: 698 WGDGDFGK--LGNGSCNGSPIPVQI-DTL--VNVSRIYSGSQFSVALSCDGTLYTWGKGH 752

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGHGN ++ + PK V +L G K+  VA G  H  A+              G+L+ WG
Sbjct: 753 GGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTS-----------SGELYGWG 801

Query: 458 DAD 460
             D
Sbjct: 802 RND 804



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 131/277 (47%), Gaps = 14/277 (5%)

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            I+ WGHN+ G  L G   SR   +P    + L  +R  ++A GE     V+  G+L+  G
Sbjct: 3939 IFGWGHNHRG-QLGGLDGSRIK-MPTPC-EALSLLRPIQIAGGEQTLYAVTPDGKLYATG 3995

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
             G  G LG G   +VS P  VESL+ + +K VA         V+     C + +  G++F
Sbjct: 3996 YGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVA---------VNSGGKHCLALSSDGEVF 4046

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
            +WG+ + G+LGH + +    P  +  L     +  +CG   +  +T  G V T G   +G
Sbjct: 4047 SWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYG 4106

Query: 515  QLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            +LG+  ++D+    +VE  L    +     SG      +T   +V++WG    G+LG G 
Sbjct: 4107 RLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4166

Query: 573  SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            S   + P  +E+L    V  V CGS  + A+    S+
Sbjct: 4167 SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSV 4203



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +  WG+G  G    G+ +GS            P  ++   +++V  I  G++ +  ++ +
Sbjct: 695 LFAWGDGDFGKLGNGSCNGS------------PIPVQIDTLVNVSRIYSGSQFSVALSCD 742

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G ++ WG+G  GRLGH  +   + PKLV  L G  +  V+ G     ALT SGE+Y WG 
Sbjct: 743 GTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGR 802

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N++   +     SR   +   +  T   +R+S + CG
Sbjct: 803 NDY-QQICPSGVSRDPIIHSPILTTPPTLRISGMTCG 838


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 182/350 (52%), Gaps = 17/350 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     + D  LP+++ +    ++  ++ GA H  A       ++ WG G  GRLGH
Sbjct: 34  DGQLGHGDAE-DRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGH 92

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P  ++ L G+ ++ ++CG+    A+T  GE+Y+WG N +G   +G+  +   
Sbjct: 93  GNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGD--TDDS 150

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P KL    +GV V  +A G  HTA V+  G+L+ +G G +G LG G+  +   P EV 
Sbjct: 151 LVPHKLL-AFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVP 209

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++   K+  VACG  HT A+           +  GKL+T+G +  G+LGH D    LLP 
Sbjct: 210 AVGDEKMCMVACGWRHTIAV-----------SQSGKLYTYGWSKYGQLGHGDYADHLLPH 258

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKE 535
            V  L +F+  Q S G   TV LT  GK+Y  G    GQ+G+    D  S  ++    + 
Sbjct: 259 QVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQH 318

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           + V  +S G  H   +T   +VY+WG+  +GQLG GD+ +R  P  ++AL
Sbjct: 319 QRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 166/340 (48%), Gaps = 18/340 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +S GA H   +   G+V C +G G+DG+LGH    D   P+++  L+   +  V+CG   
Sbjct: 10  VSAGASHTVALLS-GQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADH 68

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A + +   IY+WG  + G   +G   S   ++P  +   L G+ + ++ACG+ H   V
Sbjct: 69  TTAYSATRLTIYSWGWGDFGR--LGHGNSSDLFVPHPI-KALQGLEIRQIACGDSHCLAV 125

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G+++++G    G LG G+  +   P ++ +  G+ VK +A G  HTAA+ D      
Sbjct: 126 TADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD------ 179

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                GGKL+ WG    G LG  D   ++LP  V  + D      +CG   T+ ++  GK
Sbjct: 180 -----GGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+    D  +      L E  +  +S G  H   LT  G +Y WG N 
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNK 294

Query: 565 NGQLGLGDSQERETPTFVEALRDRQ-VESVVCGSSITAAI 603
            GQ+G GD  +  +P  +      Q V  V CG   T A+
Sbjct: 295 FGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  V+ G  HT  + +   + ++G G  G LGHG+ ++   P+ + +L   ++  VACG
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACG 65

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A     +           +++WG  D GRLGH +     +P  +  L   +  Q 
Sbjct: 66  ADHTTAYSATRL----------TIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQI 115

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+VY+ G   +GQLG     D  +       +   VK +++G+ H A
Sbjct: 116 ACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTA 175

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T GG +Y WG    G LGLGD  +R  P  V A+ D ++  V CG   T A+
Sbjct: 176 AVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAV 229



 Score = 43.5 bits (101), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT +  V+ WG G  G+LGH   +D S PK ++ LS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 187/387 (48%), Gaps = 30/387 (7%)

Query: 221  VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            VM+WG   +  LGG  G  V              +P   ++   L   +IS G+K   +V
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHISGGSKSLFIV 3075

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEI 335
            +++G+VF  GEG +GRLG  V  +V  P  +  L    V+ V+   G     ALT  G++
Sbjct: 3076 SQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3135

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            ++WG    G    G R +     PR L + L   ++  VACG  H+A +S+ G+L+T+G 
Sbjct: 3136 FSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAKKIRDVACGSSHSAAISSQGELYTWGL 3192

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G LGHG+     +PK+V +L G +V  VACG    A  + +  D        G +F+
Sbjct: 3193 GEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGS-RDAQTLALTED--------GAVFS 3243

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD D G+LG    E    P  + RL     +Q  CG   ++ LT  G+V+T G   + +
Sbjct: 3244 WGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYR 3303

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ G G++  
Sbjct: 3304 LGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFV 3363

Query: 576  RETPTFVEALRDRQVESVVCGSSITAA 602
             + P  V  L    V  V CGSS + A
Sbjct: 3364 NKKPALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 188/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4157 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4207

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4208 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A +++SG + T+G G +G LGHG+ ++
Sbjct: 4268 GNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSED 4324

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4325 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4373

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     ++  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4374 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4433

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 4434 PKKVAALQGK----KIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4489

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4490 AALQGKHIVKVTCGSAHTLAL 4510



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 159/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 4221 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4280

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 4281 HLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4337

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4338 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4397

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4398 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4444

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 4445 IISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4500

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4501 TCGSAHTLALST 4512



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 155/334 (46%), Gaps = 18/334 (5%)

Query: 268  SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
            SLG   AA       V  WG     +LG      V  P   + +S +    +S G     
Sbjct: 3014 SLGESVAAEQELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLF 3073

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVS 385
             +++ G+++  G   +G   +G   + +  LP +L   L    V KVA   G  H   ++
Sbjct: 3074 IVSQDGKVFACGEGTNGR--LGLGVTHNVPLPHQL-PVLHQYVVKKVAVHSGGKHALALT 3130

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
              G++F++G+G  G LGHGN   + +P+ VE+LR  K++ VACG  H+AAI         
Sbjct: 3131 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI--------- 3181

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLG 503
              +  G+L+TWG  + GRLGH D   +L P  VT L     +Q +CG     T+ LT  G
Sbjct: 3182 --SSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDG 3239

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
             V++ G    G+LG   ++  +      +L    V  I  G+     LT  G V+TWGK 
Sbjct: 3240 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3299

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
               +LG G  Q    P  +  LR R+V  V  G+
Sbjct: 3300 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGA 3333



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 115/247 (46%), Gaps = 23/247 (9%)

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            T+  +R   ++ G     IVS  G++F  G+GT G LG G   NV  P ++  L    VK
Sbjct: 3056 TISRLRPIHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVK 3115

Query: 425  SVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTR 480
             VA   G  H  A+            + GK+F+WG+ + G+LGH  G R  L  P  V  
Sbjct: 3116 KVAVHSGGKHALALT-----------LDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEA 3162

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  ++  G++YT G   +G+LG+     + K + +T + G+   +
Sbjct: 3163 LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQ 3222

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G+V++WG    G+LG G S+   TP  +E L    V  + CG
Sbjct: 3223 VACG--SRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECG 3280

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 3281 AQFSLAL 3287



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4359 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 4408

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + +GE+YTWG
Sbjct: 4409 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4468

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4469 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4513



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 21/269 (7%)

Query: 305 PKLVECLSGINVQSVS--CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           P+ +E L+   + S++  C      A+  +   Y+WG         G+  +R+  +P K+
Sbjct: 604 PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARA--VPTKI 661

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              LD   V  V CG  ++A ++ SG L+T+G GT+G LGHGN  +   P  V +L   +
Sbjct: 662 -SALDRC-VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYE 719

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           +  VA G     ++       C ++   G ++ WGD D G+LG+ +    L P  V  L 
Sbjct: 720 IIDVALGSGDAHSL-------CLTSE--GLVYAWGDGDYGKLGNGNCNSSLQPILVETLP 770

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAV---HGQLGNPKAKDRSITVVEGKLKEEFVK 539
               + A  G   ++ LT  G +Y+ G A    H Q+     +  S+  +   L+ + + 
Sbjct: 771 RVQRIFA--GAQSSMALTTEGHLYSWGKASCLGHQQVER-SVQGCSVPRLVSSLQHKRLV 827

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            ++ G  H   LTS G V+ WG+N + Q+
Sbjct: 828 DVAVGVAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 35/290 (12%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA-- 427
           +V ++AC E    ++S  G+L+         LG   L+    P+ +E L    + S+A  
Sbjct: 572 QVKQIACSESLLLLLSQDGKLYNCR------LGKPELE----PQPIEELAQETILSIAGH 621

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           C   H  AI          NA     ++WG  +  RLGH D   + +PT ++ L D    
Sbjct: 622 CEGRHFLAI------DSNRNA-----YSWGAGEDHRLGHGDTHARAVPTKISAL-DRCVK 669

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-EFVK-GISSGS 545
              CG   +  +T  G +YT G   +G+LG+  + D+ +  +   L E E +   + SG 
Sbjct: 670 AVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGD 729

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            H   LTS G VY WG    G+LG G+      P  VE L   +V+ +  G+  + A+  
Sbjct: 730 AHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETL--PRVQRIFAGAQSSMALTT 787

Query: 606 HKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGL-HFCSACSTKKIINASL 654
              +    ++SC       G ++ + +   C +    S+   K++++ ++
Sbjct: 788 EGHLYSWGKASC------LGHQQVERSVQGCSVPRLVSSLQHKRLVDVAV 831



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 2/153 (1%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +  WG  DK +LG + G +  +PT    +     +  S G      ++  GKV+  G   
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG     +  +      L +  VK   + SG  H   LT  G V++WG+  +G+LG 
Sbjct: 3089 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3148

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+    + P  VEALR +++  V CGSS +AAI
Sbjct: 3149 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 3181



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4196

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4197 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4256

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +TS G V TWGK   
Sbjct: 4257 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITSSGHVLTWGKGRY 4314

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 4315 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4374

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 4375 GSDGCKLPY 4383



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            GK+F  G+   GRLG        LP  +  L  +    V    G    + LT  GKV++ 
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3138

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L+ + ++ ++ GS H A ++S G +YTWG    G+L
Sbjct: 3139 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3198

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            G GD+  +  P  V AL  R+V  V CGS     + L +  +V
Sbjct: 3199 GHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAV 3241


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 190/392 (48%), Gaps = 41/392 (10%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WG G  G         + +     V A  P   ++      Q +  G     ++  
Sbjct: 153 DVYLWGAGRHG-------QLAEAGRNVMVPATAPSFSQA------QQVICGQNCTFVIQA 199

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
            G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 200 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 259

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 260 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 316

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 317 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 366

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 367 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 424

Query: 517 GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 425 GLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 480

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           G +     PT V  L+ + +  +  G   +AA
Sbjct: 481 GHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 512



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 29/278 (10%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 153 DVYLWGAGRHGQL---AEAGRNVMVPAT---APSFSQAQQVICGQNCTFVIQANGTVLAC 206

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
           G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 255

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 256 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 315

Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 316 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 371

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 372 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 409



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 24/242 (9%)

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 145 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPATAPSFS--QAQQVICGQNCTFVI- 197

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                  ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 198 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 247

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
            ++ LT  G+V++ G   +G+LG+  + + R    +E    EE V+ +S G  H AV+TS
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ-MSCGFKHSAVVTS 306

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI--SV 611
            G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+  + 
Sbjct: 307 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAF 366

Query: 612 GD 613
           GD
Sbjct: 367 GD 368



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 448 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 507

Query: 324 FQTCALT 330
             + A T
Sbjct: 508 CHSAAWT 514


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 206/440 (46%), Gaps = 34/440 (7%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 2637 QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 2683

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V+++G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 2684 KSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 2743

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L + L   ++  VACG  H+A +S+ G+
Sbjct: 2744 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAKKIRDVACGSSHSAAISSQGE 2800

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 2801 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGS-RDAQTLALTED------- 2852

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     VQ  CG   ++ LT  G+V+T G
Sbjct: 2853 -GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 2911

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 2912 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2971

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             G++   + P  V  L    V  V CGSS + A  L  + S  ++       +PFG  R 
Sbjct: 2972 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEEKRG----PVPFGSTRD 3027

Query: 630  KHNCYNCGLHFCSACSTKKI 649
                 + G++      T K+
Sbjct: 3028 PLGGSSLGIYEAETVQTLKL 3047



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 34/302 (11%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             ++ V+C E Q   L++ G++YTW            R ++    P  + +    V +S 
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW------------RLAKPEAEPLPMEEVAHDVFISI 273

Query: 374 VA-CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
              C   H   + ++   +++G G    LGHG+    + P ++ +L    V+SV CG  +
Sbjct: 274 AGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSY 333

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +AAI             GG L TWG     RLGH + + + LPT V  L D   V  + G
Sbjct: 334 SAAIT-----------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALG 382

Query: 493 R--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
                ++ LT  G V+  G   +G+LGN         ++   L    V+ + +GS     
Sbjct: 383 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVA 440

Query: 551 LTSGGSVYTWGKNA--NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           L+S G +YTWGK      QL     Q    P  V +L+ +++  V    +++ A CL  S
Sbjct: 441 LSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV----AVSVAHCLALS 496

Query: 609 IS 610
            S
Sbjct: 497 SS 498



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 18/212 (8%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +H   +      + WG G+D RLGH      + P  +  L    VQSV CG   + A+T 
Sbjct: 280 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITC 339

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS-KVACGEWHTAIVSTSGQL 390
            G + TWG   +    +G   S    LP  +    D + V   +  G+ H+  +++ G +
Sbjct: 340 GGNLLTWGRGTYAR--LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 397

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           F +GDG +G LG+GN     QP  VESL   +V+ V  G   + A+           +  
Sbjct: 398 FAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVAL-----------SSE 444

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           G+L+TWG A    LGH   ER +    V RLV
Sbjct: 445 GQLYTWGKATC--LGHQLVERSVQGCSVPRLV 474



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 24/203 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           VQ++  G  ++A +T  G +  WG G   RLGH  + D S P LV  LS   V  V+   
Sbjct: 324 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 383

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  + ALT  G ++ WG  ++G   +G         P  L ++L   RV +V  G   +
Sbjct: 384 GDAHSLALTSEGLVFAWGDGDYGK--LGNGNCNGSLQP-ILVESLP--RVQRVFAGSQFS 438

Query: 382 AIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             +S+ GQL+T+G  T   LGH     ++Q  S P+ V SL+  ++  VA          
Sbjct: 439 VALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA---------- 486

Query: 438 DIMVDRCKSNAIGGKLFTWGDAD 460
            + V  C + +  G++F WG  D
Sbjct: 487 -VSVAHCLALSSSGEVFGWGRND 508


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2734 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2793

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G+I++WG  + G   +G   SR +    +L + L  
Sbjct: 2794 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2850

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2851 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2910

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2911 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2959

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2960 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3018

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3019 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  +Q I  G +    VT +G+++  G G 
Sbjct: 3717 GQLGG-IEGAKVKVPTPCEAL-------AALRPIQLIG-GEQTLFAVTADGKLYATGYGA 3767

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3768 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3827

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  +A G  H+A ++ +G L+T+G G +G LGHG+ ++
Sbjct: 3828 GNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSED 3884

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 3885 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3935

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3995

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3996 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4051

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4052 LQGKKINRVACGSAHTLAWSTSKPANAG 4079



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G++F WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 2807 GGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 2866

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 2923

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 2924 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 2974

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 2975 --SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3032

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3078



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3705 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALAALRPIQLIGGEQTLFAVTADGKLY 3761

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3762 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3821

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G L+TWG    GRLGH D
Sbjct: 3822 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD 3881

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 3882 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 3941

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 3942 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4001

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4002 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4059

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P +          YNHLQ+ 
Sbjct: 4060 VACGSAHTLAWSTSKPANAGKLPTQ------VPMEYNHLQEF 4095



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2706 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-------- 2814

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 2815 ---TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 2871

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 2872 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 2929

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2930 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2972



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK G V
Sbjct: 3923 WGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3972

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            + WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ 
Sbjct: 3973 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4032

Query: 344  GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4033 GQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4073



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K A G    A + T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 2693 GSLIRKKASGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2750

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      +P  +T L ++  
Sbjct: 2751 GGSKSLFAV-----------TVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVV 2799

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G    + LT  GK+++ G    G+LG+    +     +   LK + ++ I+ G
Sbjct: 2800 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 2859

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A +TS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 2860 SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919

Query: 605  L 605
            L
Sbjct: 2920 L 2920



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 50/211 (23%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + +  ++C E +   L+++G +Y   +N
Sbjct: 339 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN 393

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS-TSGQLFTYGDGTFGV 400
           +                     DTL GV            A+ S   GQ++++GDG +G 
Sbjct: 394 S---------------------DTLVGV-----------VAVFSLIFGQVWSWGDGDYGK 421

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G       PK +E L+ L V  V CG   + A+              G++++WG  D
Sbjct: 422 LGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK-----------DGQVYSWGKGD 470

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
             RLGH   E    P  +  L      QA+C
Sbjct: 471 NQRLGHGTEEHVRYPKLLEGL-QATLPQANC 500



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 13/134 (9%)

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP------------WHTAAIVDIMVDRCK 445
           +G++G     NV  P + E L  L +  +AC              +  A   D +V    
Sbjct: 343 WGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA 402

Query: 446 S-NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
             + I G++++WGD D G+LG    +    P  + +L D D V+  CG   +V LT  G+
Sbjct: 403 VFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 462

Query: 505 VYTMGSAVHGQLGN 518
           VY+ G   + +LG+
Sbjct: 463 VYSWGKGDNQRLGH 476



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 15/112 (13%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G  G+LG   +     PKL+E L  ++V  V CG   + ALTK G++Y+WG 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 341 NN-----HGAD--------LVGERRS--RSHWLPRKLFDTLDGVRVSKVACG 377
            +     HG +        L G + +  +++ L +K    LD   +  +ACG
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACG 520



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 10/95 (10%)

Query: 217 ILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           I   V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  
Sbjct: 407 IFGQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVA 456

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           +TK+G+V+ WG+G + RLGH     V  PKL+E L
Sbjct: 457 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%)

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+V++ G   +G+LG   +       +  KL++  V  +  GS     LT  G VY+WG
Sbjct: 408 FGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWG 467

Query: 562 KNANGQLGLGDSQERETPTFVEALR 586
           K  N +LG G  +    P  +E L+
Sbjct: 468 KGDNQRLGHGTEEHVRYPKLLEGLQ 492



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G V++WG    G+LG G S   +TP  +E L+D  V  V CGS  + A+
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 457


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2962 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3021

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G+I++WG  + G   +G   SR +    +L + L  
Sbjct: 3022 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3078

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3079 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3138

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3139 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3187

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3188 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3246

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3247 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3944 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3994

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3995 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4054

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  +A G  H+A ++ +G LFT+G G +G LGHG+ ++
Sbjct: 4055 GNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4111

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4112 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4162

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4222

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4223 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4278

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4279 LQGKKINRVACGSAHTLAWSTSKPANAG 4306



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G++F WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3035 GGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3094

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3095 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3151

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3152 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3202

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3203 --SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3260

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3306



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 196/444 (44%), Gaps = 75/444 (16%)

Query: 201 RLVTPTY----GSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
           RL TP       SP    K  L++V+ WG  ++G      V G             P   
Sbjct: 379 RLATPCMPPQCSSP-TSHKGSLQEVIAWG--LIGWKYYANVSG-------------PIQC 422

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINV 316
           E    L V  I+   K   ++++ G V+              N D   P+LV+ L+  N+
Sbjct: 423 EGLASLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLASRNI 472

Query: 317 QSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDGVRV 371
             ++         AL+ +GE+++WG  + G      R      +P    KL   L G + 
Sbjct: 473 VKIAAHSDGHHYLALSANGEVFSWGCGDGG------RLGHGDTVPLEEPKLISALSGKQA 526

Query: 372 SK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  V+
Sbjct: 527 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 586

Query: 428 CGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           CG     T A+ +            G++++WGD D G+LG    +    P  + +L D D
Sbjct: 587 CGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 635

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSG 544
            V+  CG   ++ LT  G+VYT G   + +LG+   +  R   ++EG LK + V  +++G
Sbjct: 636 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAAG 694

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S H   LT    V++WG N   Q        +  P  +  L  + +  + CG + + A  
Sbjct: 695 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA-- 752

Query: 605 LHKSISVGDQSSCSQ----CRMPF 624
                     SSCS+     R+PF
Sbjct: 753 ---------WSSCSEWSIGLRVPF 767



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 159/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3932 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3988

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3989 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4048

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G LFTWG    GRLGH D
Sbjct: 4049 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4108

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4109 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4168

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4169 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4228

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4229 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4286

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P +          YNHLQ+I
Sbjct: 4287 VACGSAHTLAWSTSKPANAGKLPTQ------VPMEYNHLQEI 4322



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2934 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2990

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT------- 3043

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3044 ----VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3099

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3100 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3157

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3158 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3200



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK G V
Sbjct: 4150 WGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4199

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            + WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ 
Sbjct: 4200 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4259

Query: 344  GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4260 GQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4300



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 567 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 626

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  +++  V CG   + ALTK G++YTWG  +     HG +         H    K
Sbjct: 627 LIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE--------EHVRYPK 678

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   +++P E  +L GL
Sbjct: 679 LLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKP-EPAALPGL 735

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 736 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 772



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  ++G  R+    L    F   D           G  V K A G    A + T  ++F
Sbjct: 2885 HGLSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRT--KVF 2942

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2943 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2991

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GK+++ 
Sbjct: 2992 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSW 3051

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +YTWG    G+L
Sbjct: 3052 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 3111

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3112 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3148


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3102

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3163 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3270

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3968 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4018

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGH 4078

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  +A G  H+A ++ +G LFT+G G +G LGHG+ ++
Sbjct: 4079 GNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4136 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4186

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4247 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4303 LQGKKINRVACGSAHTLAWSTSKPANAG 4330



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3059 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3226

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3227 --SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 196/444 (44%), Gaps = 75/444 (16%)

Query: 201 RLVTPTY----GSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
           RL TP       SP    K  L++V+ WG  ++G      V G             P   
Sbjct: 403 RLATPCMPPQCSSP-TSHKGSLQEVIAWG--LIGWKYYANVSG-------------PIQC 446

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINV 316
           E    L V  ++   K   ++++ G V+              N D   P+LV+ L+  N+
Sbjct: 447 EGLANLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLASRNI 496

Query: 317 QSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDGVRV 371
             ++         AL+ +GE+++WG  + G      R      +P    K+   L G + 
Sbjct: 497 VKIAAHSDGHHYLALSANGEVFSWGCGDGG------RLGHGDTVPLEEPKMISALSGKQA 550

Query: 372 SK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 428 CGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           CG     T A+ +            G++++WGD D G+LG    +    P  + +L D D
Sbjct: 611 CGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSG 544
            V+  CG   ++ LT  G+VYT G   + +LG+   +  R   ++EG LK + V  +++G
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAAG 718

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S H   LT    V++WG N   Q        +  P  +  L  + +  + CG + + A  
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA-- 776

Query: 605 LHKSISVGDQSSCSQ----CRMPF 624
                     SSCS+     R+PF
Sbjct: 777 ---------WSSCSEWSIGLRVPF 791



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 159/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3956 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAE 4072

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G LFTWG    GRLGH D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4192

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4193 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4252

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4253 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4310

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P +          YNHLQ+I
Sbjct: 4311 VACGSAHTLAWSTSKPANAGKLPTQ------VPMEYNHLQEI 4346



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2958 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT------- 3067

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3068 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3181

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK 
Sbjct: 4171 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4220

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG 
Sbjct: 4221 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4280

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4281 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4324



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  +++  V CG   + ALTK G++YTWG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   +++P E  +L GL
Sbjct: 703 LLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 796



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  ++G  R+    L    F   D           G  V K A G    A + T  ++F
Sbjct: 2909 HGLSILGRIRAEDEDLAAVPFLASDNEEEDDDKPNTGSLVRKKAAGLESAATIRT--KVF 2966

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2967 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3015

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GKV++ 
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3075

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +YTWG    G+L
Sbjct: 3076 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 3135

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3136 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3056 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3115

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3172

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3223

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3224 --SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L +  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYM----------QAYNSDTLG 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+++WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+   L G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  V+CG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 TGLKGLKVIDVSCGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   +V LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 707 LQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPTALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 13/171 (7%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G      +T +  V+ WG+G  G+LG   +     P  ++ L+G+ V  V CG   + AL
Sbjct: 4025 GDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4084

Query: 330  TKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            TKSG +YTWG  +     HG+D    R       PR++   L G +V  +A G  H    
Sbjct: 4085 TKSGAVYTWGKGDYHRLGHGSDDHVRR-------PRQV-QGLQGKKVIAIATGSLHCVCC 4136

Query: 385  STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            +  G+++T+GD   G LG G    + +P+ V +L+G K+  VACG  HT A
Sbjct: 4137 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 47/249 (18%)

Query: 281  GEVFCWGEGKDGRLG----HKVNMDVSCPKL-----------------------VECLSG 313
            G ++ WG    G+LG     KV +   C  L                       VE L G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 314  INVQSVSCG--EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
              V  ++CG  + QT  LT    +++WG  ++G   +G   S    +P K+ D+L G+ V
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK--LGRGGSDGCKVPMKI-DSLTGLGV 4071

Query: 372  SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
             KV CG   +  ++ SG ++T+G G +  LGHG+  +V +P++V+ L+G KV ++A G  
Sbjct: 4072 VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL 4131

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQA 489
            H           C      G+++TWGD D+G+LG  DG    +  P  V  L      + 
Sbjct: 4132 H-----------CVCCTEDGEVYTWGDNDEGQLG--DGTTNAIQRPRLVAALQGKKINRV 4178

Query: 490  SCGRMLTVG 498
            +CG   T+ 
Sbjct: 4179 ACGSAHTLA 4187



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3064 ---TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK G V
Sbjct: 4041 WGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4090

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            + WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ 
Sbjct: 4091 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4150

Query: 344  GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4151 GQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4191



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 100/246 (40%), Gaps = 45/246 (18%)

Query: 332  SGEIYTWGHNNHG------------------------ADLVGERRSRSHWLPRKLFDTLD 367
            SG IY WGHN+ G                          L+G  ++          + L 
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013

Query: 368  GVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
            G RV  +AC  G+  T  ++    ++++GDG +G LG G       P +++SL GL V  
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4073

Query: 426  VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
            V CG   + A+              G ++TWG  D  RLGH   +    P  V  L    
Sbjct: 4074 VECGSQFSVALTK-----------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4122

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  T  G+VYT G    GQLG    N   + R +  ++GK     +  +
Sbjct: 4123 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----INRV 4178

Query: 542  SSGSYH 547
            + GS H
Sbjct: 4179 ACGSAH 4184



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   +++P E  +L GL
Sbjct: 703 LLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKP-EPTALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 796



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+G+V
Sbjct: 630 WGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQV 679

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG N+ 
Sbjct: 680 YSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQ 739

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
                  R ++    P  L   LD   +  +ACG
Sbjct: 740 CQHFDTLRITKPE--PTAL-PGLDTKHIVGIACG 770



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K + G    A + T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 2942 GSLIRKKSSGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2999

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      +P  +T L ++  
Sbjct: 3000 GGSKSLFAV-----------TVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVV 3048

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G    + LT  GKV++ G    G+LG+    +     +   LK + ++ I+ G
Sbjct: 3049 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3108

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A +TS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 3109 SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 605  L 605
            L
Sbjct: 3169 L 3169



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 50/267 (18%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK------ 504
            G ++ WG   +G+LG ++G +  +PT    L     +Q   G      +T  GK      
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 505  -----------------------VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
                                   V++ G   +G+LG   +    + +    L    V  +
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4074

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
              GS     LT  G+VYTWGK    +LG G       P  V+ L+ ++V ++  GS    
Sbjct: 4075 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LH 4132

Query: 602  AICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
             +C  +   V             G  ++  + R+    + KK N   CG     A ST K
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSK 4192

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKI 675
              NA   P +          YNHLQ+I
Sbjct: 4193 PANAGKLPTQ------VPMEYNHLQEI 4213


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2990 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3049

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3050 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3106

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3107 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3166

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3167 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3215

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3216 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3274

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3275 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3973 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4023

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4024 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4083

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4084 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4140

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G  V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4141 QLKPKLVEALQGHHVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4191

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4251

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4252 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4307

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4308 LQGKKVNRVACGSAHTLAWSTSKPASAG 4335



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3025 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3085 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3144

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3145 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3201

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3202 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3250

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3251 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3310

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3311 VQG-LEGQKITRVACGSSHSVAWTT 3334



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3961 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4017

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4018 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4077

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4137

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4138 SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4197

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4198 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4257

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4258 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4315

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4316 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4351



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2962 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3018

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3071

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3072 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3127

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3128 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3185

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3186 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3228



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK 
Sbjct: 4176 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4225

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG 
Sbjct: 4226 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4285

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G +V++VACG  HT   STS
Sbjct: 4286 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4329



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 770



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2913 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2970

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2971 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3019

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3020 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3079

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3080 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3139

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3140 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3176


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G+I++WG  + G   +G   SR +    +L + L  
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3102

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3163 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3270

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 195/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3968 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4018

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4078

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  +A G  H+A ++ +G LFT+G G +G LGHG+ ++
Sbjct: 4079 GNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4136 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4186

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L D   V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4247 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4303 LQGKKINRVACGSAHTLAWSTSKPANAG 4330



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G++F WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3059 GGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3226

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3227 --SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 196/444 (44%), Gaps = 75/444 (16%)

Query: 201 RLVTPTY----GSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
           RL TP       SP    K  L++V+ WG  ++G      V G             P   
Sbjct: 403 RLATPCMPPQCSSP-TSHKGSLQEVIAWG--LIGWKYYANVSG-------------PIQC 446

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINV 316
           E    L V  I+   K   ++++ G V+              N D   P+LV+ L+  N+
Sbjct: 447 EGLANLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLASRNI 496

Query: 317 QSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDGVRV 371
             ++         AL+ +GE+++WG  + G      R      +P    KL   L G + 
Sbjct: 497 VKIAAHSDGHHYLALSANGEVFSWGCGDGG------RLGHGDTVPLEEPKLISALSGKQA 550

Query: 372 SK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 428 CGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           CG     T A+ +            G++++WGD D G+LG    +    P  + +L D D
Sbjct: 611 CGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSG 544
            V+  CG   ++ LT  G+VYT G   + +LG+   +  R   ++EG LK + V  +++G
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAAG 718

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S H   LT    V++WG N   Q        +  P  +  L  + +  + CG + + A  
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA-- 776

Query: 605 LHKSISVGDQSSCSQ----CRMPF 624
                     SSCS+     R+PF
Sbjct: 777 ---------WSSCSEWSIGLRVPF 791



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 160/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3956 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G LFTWG    GRLGH D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD 4132

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4192

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L +  V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4193 PMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4252

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4253 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4310

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P +          YNHLQ+I
Sbjct: 4311 VACGSAHTLAWSTSKPANAGKLPTQ------VPMEYNHLQEI 4346



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2958 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT------- 3067

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3068 ----VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3181

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK 
Sbjct: 4171 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDSLTDLGVVKVECGSQFSVALTKS 4220

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG 
Sbjct: 4221 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4280

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4281 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4324



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  +++  V CG   + ALTK G++YTWG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   +++P E  +L GL
Sbjct: 703 LLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 796



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  ++G  R+    L    F   D           G  V K A G    A + T  ++F
Sbjct: 2909 HGLSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRT--KVF 2966

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2967 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3015

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GK+++ 
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSW 3075

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +YTWG    G+L
Sbjct: 3076 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 3135

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3136 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 170/339 (50%), Gaps = 30/339 (8%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+ WG G+DG+LG     D   P LV+ L    V  V+CG   T  L++ G +YTWG 
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGR 66

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G   +   ++PR + + L+G R+ +  CG +HTA V+  G+L+T+G G +G 
Sbjct: 67  GDDGR--LGHGDNGWKYVPR-IVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 401 LGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           LGHGN      P  V+ LR  G +V  +ACG  HT  + D+           GK++TWGD
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDL-----------GKVYTWGD 172

Query: 459 ADKGRLGHVDGE-RKLLPTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            + G +GH + +  + LP  +  L      Q A+CG   T  LT  G+++T G    G+L
Sbjct: 173 KENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG-FHTAALTAAGEIFTWGEGKFGRL 231

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ--------- 567
           G+   +++ +  +   L  + V  ++ G +H A +   G +YTWG   +GQ         
Sbjct: 232 GHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDH 291

Query: 568 --LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             LG GD ++   PT V  L    V  V   +  TAA+ 
Sbjct: 292 GKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALA 330



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 169/335 (50%), Gaps = 33/335 (9%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG +    T  D   P L+++     V  ++ G+ H  +++++G V+ WG G DGRLGH 
Sbjct: 17  DGQLGLGDTN-DQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHG 75

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
            N     P++VE L G  +   +CG + T A+T  GE+YTWG   +G   +G      H 
Sbjct: 76  DNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK--LGHGNESGHP 133

Query: 358 LP---RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PK 413
            P   + L D  +G RV+++ACG  HT +++  G+++T+GD   GV+GH N       P+
Sbjct: 134 TPCMVKHLRD--EGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPR 191

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            +ESL+   V  VA   +HTAA+              G++FTWG+   GRLGH     ++
Sbjct: 192 MLESLQAKTVTQVAACGFHTAAL-----------TAAGEIFTWGEGKFGRLGHGMERNQM 240

Query: 474 LPTCVTRLVDFDFVQASC-----------GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +P  V  L+       +C           G + T G    G+VYT G+  HG+LG+   +
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 523 DRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
             S+ T+V G +K   VK ++S + H A L    S
Sbjct: 301 KVSVPTLVAGLVKMHVVK-VASYNEHTAALAGASS 334



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 114/224 (50%), Gaps = 18/224 (8%)

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            +G ++++G G  G LG G+  +  +P  V++L+   V  VACG  HT  + +       
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSE------- 57

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G ++TWG  D GRLGH D   K +P  V  L     VQA+CG   T  +T  G++
Sbjct: 58  ----DGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF--VKGISSGSYHVAVLTSGGSVYTWGKN 563
           YT G  ++G+LG+          +   L++E   V  I+ GS H  VLT  G VYTWG  
Sbjct: 114 YTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDK 173

Query: 564 ANGQLGLGDSQERE-TPTFVEALRDRQVESV-VCG---SSITAA 602
            NG +G  ++   +  P  +E+L+ + V  V  CG   +++TAA
Sbjct: 174 ENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAA 217



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 3/169 (1%)

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           + G +++WG  + G+LG  D   +  P  V  L     VQ +CG   TV L+  G VYT 
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    G+LG+     + +  +   L+ + +   + GSYH A +T  G +YTWG    G+L
Sbjct: 65  GRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKL 124

Query: 569 GLGDSQERETPTFVEALRDR--QVESVVCGSSITAAIC-LHKSISVGDQ 614
           G G+     TP  V+ LRD   +V  + CGS  T  +  L K  + GD+
Sbjct: 125 GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDK 173


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2207 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2266

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2267 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2323

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2324 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2383

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2384 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2432

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2433 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2491

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2492 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 32/388 (8%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3190 GQLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKLYATGYGA 3240

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3241 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3300

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3301 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3357

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK V++L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 3358 QLKPKLVDALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3408

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3468

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  GS YTWG N  GQLG G +   + P  V A
Sbjct: 3469 QVQGLQGKK----VIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRPRLVAA 3523

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 3524 LQGKKVNRVACGSAHTLAWSTSKPASAG 3551



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2242 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 2302 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2361

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 2362 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2418

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 2419 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 2467

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 2468 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 2527

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 2528 VQG-LEGQKITRVACGSSHSVAWTT 2551



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 157/399 (39%), Gaps = 64/399 (16%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3178 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 3234

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3294

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 3295 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3354

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 3355 SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 3414

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 3415 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 3474

Query: 587  DRQVESVVCGSSITAAICLHKSISVGDQ----------SSCSQCRMPFGFRRKKHNCYNC 636
             ++V ++  GS          S + GD           ++  + R+    + KK N   C
Sbjct: 3475 GKKVIAIATGSLHCVCCTEDGSYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 3534

Query: 637  GLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
            G     A ST K  +A   P +          YNHLQ+I
Sbjct: 3535 GSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 3567



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2179 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2235

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 2288

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 2289 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2344

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 2345 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 2402

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2403 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2445



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 12/190 (6%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 3368 QGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 3419

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 3420 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3479

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ G  YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 3480 AIATGSLHCVCCTEDGS-YTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 3535

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 3536 SAHTLAWSTS 3545



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 14/220 (6%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E+L  L V  VA G     A+            
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 2233

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
            + GK++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV
Sbjct: 2234 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2293

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    
Sbjct: 2294 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2353

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 2354 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2393


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3966 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4016

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4077 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G  V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4134 QLKPKLVEALQGHHVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4184

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4245 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4301 LQGKKVNRVACGSAHTLAWSTSKPASAG 4328



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3954 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4010

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4131 SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4190

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4191 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4250

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4251 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4308

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4309 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4344



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3064

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3065 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK 
Sbjct: 4169 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKS 4218

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG 
Sbjct: 4219 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4278

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G +V++VACG  HT   STS
Sbjct: 4279 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 770



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 219/456 (48%), Gaps = 43/456 (9%)

Query: 197  NESHRLVTPTYGS-------PLIERKDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKT 246
            +E+  +  P+Y +       P     ++   V++WG   +  LGG  G  V         
Sbjct: 2999 SENETIAEPSYSTSSNYADEPASLNDEVSSKVLVWGLNDKEQLGGLKGSKVK-------- 3050

Query: 247  QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
                 LP        L   +I+ G+K   +V+++G+++  GEG +GRLG   N +V  PK
Sbjct: 3051 -----LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPK 3105

Query: 307  LVECLSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
             V  LS   V+ V+   G     ALT  G++++WG    G    G R +       KL +
Sbjct: 3106 QVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK---PKLIE 3162

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            TL   R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V +L+  +V 
Sbjct: 3163 TLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVV 3222

Query: 425  SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
             VACG      +       C +    G +F+WGD D G+LG    E   +P  V RL   
Sbjct: 3223 QVACGSRDAQTL-------CLTE--DGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGV 3273

Query: 485  DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISS 543
              +Q  CG   ++ LT  G+V+T G   + +LG+   +  R  T ++G L+ + V  ++ 
Sbjct: 3274 GVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAV 3332

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+ H   +T  G VY WG N +GQ G G++   + P+ V  L    V  V CGSS + A 
Sbjct: 3333 GALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAW 3392

Query: 604  CLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
             L ++ +  D+       +PF   +     ++ G++
Sbjct: 3393 SLPQNQTEKDKKE----PVPFAVAKDPLGSHSLGIY 3424



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 212/443 (47%), Gaps = 45/443 (10%)

Query: 183  MKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKD--VMIWGEG--VLG------GD 232
            + +EL    +      +H   TP Y S L++  +   +     WG    + G      G 
Sbjct: 4042 LAFELTSTISSSSTTTNHAYFTPQYDSQLLQWFNRRPEDWAFSWGGASTIFGWGHNHRGQ 4101

Query: 233  IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
            +GG +DGS  +N T  +AL       +++  +Q I+ G +    VT +G+++  G G  G
Sbjct: 4102 LGG-LDGSRIKNPTPCEAL-------SLLRPIQ-IAGGEQTLYAVTPDGKLYATGYGAGG 4152

Query: 293  RLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            RLG      V+ P LVE L  + ++  +V+ G     AL+  GE+++WG    G    G 
Sbjct: 4153 RLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGN 4212

Query: 351  RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
            R S       KL ++L G+ V  +ACG  H+A ++  G + T+G G +G LGHG+ ++  
Sbjct: 4213 RDSYDR---PKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL 4269

Query: 411  QPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
            QPK VE+L G +   +ACG     T  I D              +++WGD D G+LG   
Sbjct: 4270 QPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGRGG 4318

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L      +  CG   +V LT  G VYT G   + +LG+       + +
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4378

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     +  I++GS H    +  G V+TWG N  GQLG G     + P  V++
Sbjct: 4379 KVAALQGKK----IISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQS 4434

Query: 585  LRDRQVESVVCGSSITAAICLHK 607
            L+ + +  V+CGS+ T A+  ++
Sbjct: 4435 LQGKHIVKVICGSAHTLALSTYQ 4457



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 159/337 (47%), Gaps = 41/337 (12%)

Query: 245 KTQVDALLPKLLESAV--MLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM- 300
           +T +D  +P+   + +  +LD V+ I        ++T  G V          L H ++M 
Sbjct: 543 RTGIDGAMPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVL--------YLSHAISMT 594

Query: 301 DVSCPKLVECLSGINVQ-SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
           + + P  V+ L    VQ +  C      AL  SG++Y+WG  + G   +G   + +  LP
Sbjct: 595 EDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGR--LGHGDTSAKELP 652

Query: 360 RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            ++    D  +V+ V CG  ++A ++ SG+L+T+G GT+G LGHGN ++   P  V +L+
Sbjct: 653 TRIAALADR-QVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALK 711

Query: 420 GLKVKSVA--CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
             +V  VA  CG  H+  + +            G  F WGD D G+LG+       +P  
Sbjct: 712 AHRVVHVALGCGDAHSLCVTE-----------AGLAFAWGDGDFGKLGNESCVGTSVP-- 758

Query: 478 VTRLVDFDFVQASC------GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
               V  D  QASC      G   +V LT  G VYT G    G+LG+  ++   +  +  
Sbjct: 759 ----VQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQ 814

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            L+ + +  ++ G  H   LT+ G +Y WG+N   Q+
Sbjct: 815 ALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQI 851



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 107/223 (47%), Gaps = 13/223 (5%)

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           C   H   +++SG ++++G G  G LGHG+      P  + +L   +V  V CG  ++AA
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAA 675

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS--CGR 493
           I              G+L+TWG    GRLGH + E K +PT VT L     V  +  CG 
Sbjct: 676 IT-----------ASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGD 724

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             ++ +T  G  +  G    G+LGN      S+ V     +   V  + SGS     LT 
Sbjct: 725 AHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTR 784

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            G+VYTWGK   G+LG G+S+    P  V+AL  +++  +  G
Sbjct: 785 EGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVG 827



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 35/263 (13%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV  WG G  GG +G   D S  +  T++ AL  +         V  +  G+ ++A +T 
Sbjct: 629 DVYSWGSGD-GGRLGHG-DTSAKELPTRIAALADR--------QVTGVFCGSSYSAAITA 678

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS--CGEFQTCALTKSGEIYT 337
            GE++ WG G  GRLGH  + D   P LV  L    V  V+  CG+  +  +T++G  + 
Sbjct: 679 SGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFA 738

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  + G   +G        +P ++ D      V KV  G   +  ++  G ++T+G G 
Sbjct: 739 WGDGDFGK--LGNESCVGTSVPVQV-DLPQASCVVKVFSGSQFSVALTREGTVYTWGKGH 795

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGHGN ++   PK V++L G K+  +A G  H           C +    G+L+ WG
Sbjct: 796 GGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAH-----------CLALTASGELYGWG 844

Query: 458 DADKGRLGHVDGERKLLPTCVTR 480
             D          +++ P CVTR
Sbjct: 845 RNDF---------QQICPECVTR 858



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 18/279 (6%)

Query: 335  IYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            I+ WGHN+ G    L G R       P    + L  +R  ++A GE     V+  G+L+ 
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKN----PTPC-EALSLLRPIQIAGGEQTLYAVTPDGKLYA 4145

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
             G G  G LG G   +V+ P  VESL+ + +K VA         V+     C + +  G+
Sbjct: 4146 TGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVA---------VNSGGKHCLALSSDGE 4196

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +F+WG+ + G+LGH + +    P  +  L     V  +CG   +  +T  G V T G   
Sbjct: 4197 VFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGR 4256

Query: 513  HGQLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG+  ++D+    +VE  L    +     SG      +T   +V++WG    G+LG 
Sbjct: 4257 YGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4316

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            G S   + P  +E+L    V  V CGS  + A+    S+
Sbjct: 4317 GGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSV 4355



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 25/252 (9%)

Query: 358 LPRKLFDTLDGV--RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKE 414
           +PR    T+D +  +V ++ C E    I++ SG +          L H  ++   + P +
Sbjct: 550 MPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVL--------YLSHAISMTEDNYPAQ 601

Query: 415 VESLRGLKVKSVA-CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
           V+ L    V+  A C   H  A+           A  G +++WG  D GRLGH D   K 
Sbjct: 602 VKGLECTIVQLAAHCEGRHVLAL-----------ASSGDVYSWGSGDGGRLGHGDTSAKE 650

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
           LPT +  L D       CG   +  +T  G++YT G   +G+LG+  ++D+ +  +   L
Sbjct: 651 LPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTAL 710

Query: 534 KEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           K   V  ++   G  H   +T  G  + WG    G+LG         P  V+  +   V 
Sbjct: 711 KAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVV 770

Query: 592 SVVCGSSITAAI 603
            V  GS  + A+
Sbjct: 771 KVFSGSQFSVAL 782



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 16/186 (8%)

Query: 430 PWHTAAIVDIMVDR-----CKSNAI-----GGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
           P ++ A +D+++D+     C  N +      G +     A      +   + K L   + 
Sbjct: 551 PRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVLYLSHAISMTEDNYPAQVKGLECTIV 610

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
           +L       A C     + L   G VY+ GS   G+LG+     + +      L +  V 
Sbjct: 611 QLA------AHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVT 664

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
           G+  GS + A +T+ G +YTWG+   G+LG G+S+++  PT V AL+  +V  V  G   
Sbjct: 665 GVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGD 724

Query: 600 TAAICL 605
             ++C+
Sbjct: 725 AHSLCV 730



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G++ +  +T+EG V+ WG+G  GRLGH  +     PK+V+ L G  +  ++ G     AL
Sbjct: 775 GSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLAL 834

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           T SGE+Y WG N+    +  E  +R   +   +  T   +RV+ +A G
Sbjct: 835 TASGELYGWGRNDF-QQICPECVTRDPIITAPILTTPPTLRVAGMAAG 881


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ V  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTA 3045

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3102

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3103 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3163 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3270

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3271 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3969 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4019

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4020 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4079

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ +  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4080 GNRSPCDR--PR-VIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4136

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4137 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4187

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4247

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4248 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPA 4303

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4304 LQGKKVNRVACGSAHTLAWSTSKPASAG 4331



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + AL
Sbjct: 3059 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3118

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3226

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3227 --SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYA 3284

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 179/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3957 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4013

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4014 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4073

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4133

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4134 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4193

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4194 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4253

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4254 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNR 4311

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4312 VACGSAHTLAWSTSKPASAGKLPTQ------VPMEYNHLQEI 4347



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 20/247 (8%)

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLK 422
            +TL  + V +VA G      V+  G+++  G+ T G LG G +   V  P++V +L    
Sbjct: 2991 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYV 3050

Query: 423  VKSVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            VK VA   G  H  A+            + GK+F+WG+ D G+LGH        P  +  
Sbjct: 3051 VKKVAVHSGGRHATALT-----------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  LT  G++YT G   +G+LG+     + K + + V+ G    +
Sbjct: 3100 LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 3159

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G V++WG    G+LG G S+    P  +E L  + V  + CG
Sbjct: 3160 VACG--SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3217

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 3218 AQFSLAL 3224



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4131 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4182

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4183 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4236

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4237 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4294

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4295 IQRPR-LVPALQGKKVNRVACGSAHTLAWSTS 4325



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPSALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 770



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 89/203 (43%), Gaps = 14/203 (6%)

Query: 406  LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            L  +  P   E+L  L V  VA G     A+            + GK++  G+A  GRLG
Sbjct: 2981 LSQIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEGKVYACGEATNGRLG 3029

Query: 466  -HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
              +      +P  VT L  +    V    G      LT  GKV++ G    G+LG+    
Sbjct: 3030 LGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3089

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            +     +   LK + ++ I+ GS H A LTS G +YTWG    G+LG GD+  +  P  V
Sbjct: 3090 NCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV 3149

Query: 583  EALRDRQVESVVCGSSITAAICL 605
            + L   +V  V CGS     + L
Sbjct: 3150 KVLLGHRVIQVACGSRDAQTLAL 3172


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2960 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3019

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3020 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3076

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3077 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3136

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3137 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3185

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3186 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3244

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3245 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3943 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3993

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3994 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4053

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4054 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4110

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4111 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4161

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4221

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4222 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4277

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4278 LQGKKVNRVACGSAHTLAWSTSKPASAG 4305



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2995 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3055 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3114

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3115 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3171

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3172 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3220

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3221 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3280

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3281 VQG-LEGQKITRVACGSSHSVAWTT 3304



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 412 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 461

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 462 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 515

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 516 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 575

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 576 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 624

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 625 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 683

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 684 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 743

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 744 IACGPAQSFA-----------WSSCSEWSIGLRVPF 768



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 402 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 456

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 457 -------------SDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT-GEVYSWGCGDG 502

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 503 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 551

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 552 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 611

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 612 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 671

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 672 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 718



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3931 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3987

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3988 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4047

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4048 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4107

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4108 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4167

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4168 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4227

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4228 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4285

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4286 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4321



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2932 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2988

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3041

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3042 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3097

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3098 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3155

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3156 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3198



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4105 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4156

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4157 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4210

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4211 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4268

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4269 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4299



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 568 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 627

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 628 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 679

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 680 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 736

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 737 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 773



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 604 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 653

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 654 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 713

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 714 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 747



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2883 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2940

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2941 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2989

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2990 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3049

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3050 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3109

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3110 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3146


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2984 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3043

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3044 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3100

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3101 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3160

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3161 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3209

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3210 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3268

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3269 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3967 GQLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKLYATGYGA 4017

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4018 GGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4077

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4078 GNRSPCDR--PR-VVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4134

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4135 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4185

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4186 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4246 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4301

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4302 LQGKKVNRVACGSAHTLAWSTSKPTSTG 4329



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3019 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3078

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + A+T SGE+YTWG   +G    G+ 
Sbjct: 3079 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3138

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3139 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3195

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3196 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3244

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3245 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3304

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3305 VQG-LEGQKITRVACGSSHSVAWTT 3328



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYT----------QAYNSDALA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++   P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 161/349 (46%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L++SG +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
           +               L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 SDA-------------LAPQLVQGLASRNIIKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E +++P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3955 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 4011

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVA---------VNSGGKHCLALSSEG 4062

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  V  L   + V  + G   +  +T  G +YT G  
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4182

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4183 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4216



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2956 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3012

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3065

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3066 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3121

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3122 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3179

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3180 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3222



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4129 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4180

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4181 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4234

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4235 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4292

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4293 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4323



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D ++P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPSALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 770



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K A G    A + T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 2943 GSLMRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3000

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      +P  +T L  +  
Sbjct: 3001 GGSKSLFAVT-----------VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVV 3049

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G      LT  GKV++ G    G+LG+    +     +   LK + ++ I+ G
Sbjct: 3050 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3109

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A +TS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 3110 SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169

Query: 605  L 605
            L
Sbjct: 3170 L 3170



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4005

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4006 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGE 4063

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   VVE  L+   V  +++G  H A +T+ G +YTWGK
Sbjct: 4064 VYSWGEAEDGKLGHGNRSPCDRP-RVVE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 4121

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4122 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTV 4170


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 208/441 (47%), Gaps = 38/441 (8%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 2979 QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 3025

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V+++G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 3026 KSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3085

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L + L   ++  VACG  H+A +S+ G+
Sbjct: 3086 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAKKIRDVACGSSHSAAISSQGE 3142

Query: 390  LFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            L+T+G G +G LGHG+  NV+Q  PK V +L G +V  VACG    A  + +  D     
Sbjct: 3143 LYTWGLGEYGRLGHGD--NVTQLKPKLVVALAGRRVVQVACGS-RDAQTLALTED----- 3194

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G +F+WGD D G+LG    E    P  + RL     VQ  CG   ++ LT  G+V+T
Sbjct: 3195 ---GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWT 3251

Query: 508  MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
             G   + +LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3311

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFR 627
             G G++   + P  V  L    V  V CGSS + A  L  + S  ++       +PFG  
Sbjct: 3312 QGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASSDEEKRG----PVPFGST 3367

Query: 628  RKKHNCYNCGLHFCSACSTKK 648
            R      + G++      T K
Sbjct: 3368 RDPLGGSSLGIYEAETVQTLK 3388



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4056 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4106

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4107 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4166

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 4167 GNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4223

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4224 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4272

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     V+  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4273 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4332

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 4333 PKKVAALQGK----KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4388

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4389 AALQGKHIVKVTCGSAHTLAL 4409



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 159/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 4120 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4179

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 4180 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4236

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4237 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4296

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4297 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4343

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 4344 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4399

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4400 TCGSAHTLALST 4411



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 34/302 (11%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             ++ V+C E Q   L++ G++YTW            R ++    P  + +    V +S 
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW------------RLAKPEAEPLPMEEVAHEVFISI 616

Query: 374 VA-CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
              C   H   + ++   +++G G    LGHG+    + P ++ +L    V+SV CG  +
Sbjct: 617 AGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSY 676

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +AAI             GG L TWG     RLGH + + + LPT V  L D   V  + G
Sbjct: 677 SAAIT-----------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALG 725

Query: 493 R--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
                ++ LT  G V+  G   +G+LGN         ++   L    V+ + +GS     
Sbjct: 726 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSLA 783

Query: 551 LTSGGSVYTWGKNA--NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           L+S G +Y+WGK      QL     Q    P  V +L+ +++  V    +++ A CL  S
Sbjct: 784 LSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV----AVSVAHCLALS 839

Query: 609 IS 610
            S
Sbjct: 840 SS 841



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4258 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVVKVECGSQFSVALTK 4307

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 4308 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4367

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4368 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4412



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 18/212 (8%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +H   +      + WG G+D RLGH      + P  +  L    VQSV CG   + A+T 
Sbjct: 623 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITC 682

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS-KVACGEWHTAIVSTSGQL 390
            G + TWG   +    +G   S    LP  +    D + V   +  G+ H+  +++ G +
Sbjct: 683 GGNLLTWGRGTYAR--LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 740

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           F +GDG +G LG+GN     QP  VESL   +V+ V  G   + A+           +  
Sbjct: 741 FAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSLAL-----------SSE 787

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           G+L++WG A    LGH   ER +    V RLV
Sbjct: 788 GQLYSWGKATC--LGHQLVERSVQGCSVPRLV 817



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 24/203 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           VQ++  G  ++A +T  G +  WG G   RLGH  + D S P LV  LS   V  V+   
Sbjct: 667 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 726

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  + ALT  G ++ WG  ++G   +G         P  L ++L   RV +V  G   +
Sbjct: 727 GDAHSLALTSEGLVFAWGDGDYGK--LGNGNCNGSLQP-ILVESLP--RVQRVFAGSQFS 781

Query: 382 AIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             +S+ GQL+++G  T   LGH     ++Q  S P+ V SL+  ++  VA          
Sbjct: 782 LALSSEGQLYSWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA---------- 829

Query: 438 DIMVDRCKSNAIGGKLFTWGDAD 460
            + V  C + +  G++F WG  D
Sbjct: 830 -VSVAHCLALSSSGEVFGWGRND 851



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 34/291 (11%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA-- 427
           ++ +VAC E    I+S  G+L+T+             +  ++P  +E +      S+A  
Sbjct: 570 QIKQVACCETQMLILSQEGKLYTWRLA----------KPEAEPLPMEEVAHEVFISIAGH 619

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           C   H  AI          NA     ++WG  +  RLGH D   + +PT +  L      
Sbjct: 620 CEGRHFLAI------DSNHNA-----YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQ 668

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGS 545
              CG   +  +T  G + T G   + +LG+  + DRS+  +   L +  V  ++  SG 
Sbjct: 669 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 728

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            H   LTS G V+ WG    G+LG G+      P  VE+L   +V+ V  GS  + A+  
Sbjct: 729 AHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSLALSS 786

Query: 606 HKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGL-HFCSACSTKKIINASLT 655
              +    +++C       G +  + +   C +    S+   K+I++ +++
Sbjct: 787 EGQLYSWGKATC------LGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVS 831



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4095

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4096 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4155

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 4156 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY 4213

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 4214 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4273

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 4274 GSDGCKLPY 4282


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2271 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2330

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2331 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2387

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2388 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2447

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2448 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2496

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2497 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2555

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2556 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3252 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3302

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3303 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3362

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3363 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3419

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 3420 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3470

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3530

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3531 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3586

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 3587 LQGKKVNRVACGSAHTLAWSTSKPASAG 3614



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2306 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 2366 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2425

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 2426 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2482

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 2483 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 2531

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 2532 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 2591

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 2592 VQG-LEGQKITRVACGSSHSVAWTT 2615



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2243 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2299

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 2352

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 2353 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2408

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 2409 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 2466

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2467 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2509



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3240 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3296

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3297 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3356

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 3357 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3416

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 3417 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 3476

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 3477 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 3536

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 3537 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 3594

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 3595 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 3630



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 3414 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 3465

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 3466 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 3519

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 3520 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 3577

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 3578 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 3608



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2194 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2251

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2252 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2300

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2301 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2360

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 2361 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 2420

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 2421 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2457


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3966 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4016

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4077 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4134 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4184

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4245 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4301 LQGKKVNRVACGSAHTLAWSTSKPASAG 4328



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3064

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3065 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3954 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4010

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4131 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4190

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4191 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4250

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4251 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4308

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4309 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4344



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4128 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4179

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4180 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4233

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4234 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4291

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4292 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 770



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 169/334 (50%), Gaps = 16/334 (4%)

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGE 334
            VT EG+VF  G G  GRLG   N  V+ P L+E +  +++   SV+ G     AL+  GE
Sbjct: 1455 VTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +Y+WG    G    G R S  H  PR + ++L G  + KVA G  H+A ++ +G L+T+G
Sbjct: 1515 VYSWGEGVDGKLGHGNRSSLDH--PR-IIESLRGDLIVKVATGGSHSAAINATGGLYTWG 1571

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK-- 452
             G +G LGH + ++  +PK V +L+   V  VACG      +       C +   GG   
Sbjct: 1572 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTL-------CITEGTGGSSV 1624

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +++WGD D G+LG    +   +P  +  L+       +CG   ++ L+  G VYT G   
Sbjct: 1625 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGD 1684

Query: 513  HGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            + +LG+   +  R   ++E  L+   V  +S GS H       G VYTWG N  GQ+G G
Sbjct: 1685 YYRLGHGSDEHVRRPKLIE-SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDG 1743

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             +Q  + P  V AL+   +  V CGS+ T A  L
Sbjct: 1744 TTQATQIPRLVAALQGHHISHVSCGSAHTVAWSL 1777



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 167/344 (48%), Gaps = 15/344 (4%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVS 320
           L V  +  G+K    VT  G+V+  GE   GRLG   V   VS    V     I   +V 
Sbjct: 463 LKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVH 522

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G     ALT  G +Y+WG    G   +G         PRK+ +T     +  ++CG  H
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGK--LGHGSRADALTPRKI-ETFPEKCIRDISCGSSH 579

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +A + +SG L+T+G G +G LGHGN   + +PK V++L G +V  VACG      +    
Sbjct: 580 SAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTL---- 635

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
              C +    G +++WGD D G+LG    +   +P  V RL   D V+  CG   ++ L+
Sbjct: 636 ---CLTQ--DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALS 690

Query: 501 GLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             G V+T G   + +LG+   +  R   VVEG L+E  V  ++ G+ H   +T GG V+ 
Sbjct: 691 RCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFA 749

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           WG N +GQ G G +     P  V+ L   ++  + CGSS + A 
Sbjct: 750 WGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 142/286 (49%), Gaps = 25/286 (8%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
           G V GSVS+  TQV  L P+ ++         +  G +HA  +T +G V+ WG+G++G+L
Sbjct: 498 GPVTGSVSR-LTQV--LFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEEGKL 548

Query: 295 GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
           GH    D   P+ +E      ++ +SCG   + A+  SG +YTWGH  +G   +G   + 
Sbjct: 549 GHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR--LGHGNNH 606

Query: 355 SHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           +   P+ +   L G +V +VACG  +  T  ++  G ++++GDG FG LG G       P
Sbjct: 607 TLLKPKPV-QALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVP 665

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           K VE L G  V  + CG     A   + + RC      G ++TWG  D  RLGH   +  
Sbjct: 666 KPVERLSGQDVVKIECG-----AQFSLALSRC------GLVWTWGKGDYFRLGHGSDQHV 714

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             P  V  L +   V  + G +  + +T  G+V+  G   HGQ GN
Sbjct: 715 RRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGN 760



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 139/306 (45%), Gaps = 22/306 (7%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P L+ES   + +  +S+  G KH   ++ EGEV+ WGEG DG+LGH     +  P+++E
Sbjct: 1482 IPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIE 1541

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L G  +  V+ G   + A+  +G +YTWG   +G   +G   S     P KL + L   
Sbjct: 1542 SLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGR--LGHEDSEDQLKP-KLVNALKDN 1598

Query: 370  RVSKVACGEWH------TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             V  VACG         T     S  ++++GDG +G LG G       P  +++L G  +
Sbjct: 1599 LVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHI 1658

Query: 424  KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
              VACG   + A+           +  G ++TWG  D  RLGH   E    P  +  L  
Sbjct: 1659 THVACGSQFSLAL-----------SKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRG 1707

Query: 484  FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
               V+ S G +  +     G VYT G    GQ+G+   +   I  +   L+   +  +S 
Sbjct: 1708 MKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSC 1767

Query: 544  GSYHVA 549
            GS H  
Sbjct: 1768 GSAHTV 1773



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 57/247 (23%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           ++ DAL P+ +E+     +++IS G+ H+A +   G ++ WG G  GRLGH  N  +  P
Sbjct: 552 SRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKP 611

Query: 306 KLVECLSGINVQSVSCG--EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
           K V+ LSG  V  V+CG  + QT  LT+ G +Y+WG  + G   +G   S    +P+ + 
Sbjct: 612 KPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGK--LGRGGSDGCCVPKPV- 668

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR---- 419
           + L G  V K+ CG   +  +S  G ++T+G G +  LGHG+ Q+V +P+ VE LR    
Sbjct: 669 ERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKV 728

Query: 420 ------------------------------------------------GLKVKSVACGPW 431
                                                           G+K+  +ACG  
Sbjct: 729 VDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSS 788

Query: 432 HTAAIVD 438
           H+ A  D
Sbjct: 789 HSIAFAD 795



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 26/288 (9%)

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            T +   SG I+ WGHN+ G   +G        +P     +L  ++  ++  GE     V+
Sbjct: 1400 TLSWVGSGSIFGWGHNHRGQ--LGGPEGAKVKIPIPC-PSLAALKPIQLVGGEQTLFTVT 1456

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK--SVACGPWHTAAIVDIMVDR 443
              G++F  G G  G LG G+ ++V+ P  +ES++ + +   SV  G  H  A+       
Sbjct: 1457 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILAL------- 1509

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGLTG 501
              SN   G++++WG+   G+LGH  G R  L  P  +  L     V+ + G   +  +  
Sbjct: 1510 --SNE--GEVYSWGEGVDGKLGH--GNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINA 1563

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT----SGGS- 556
             G +YT G   +G+LG+  ++D+    +   LK+  V  ++ G+     L     +GGS 
Sbjct: 1564 TGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSS 1623

Query: 557  -VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             V++WG    G+LG G S   + P  ++ L  + +  V CGS  + A+
Sbjct: 1624 VVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLAL 1671



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 15/222 (6%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG +F +G    G LG      V  P    SL  LK   +  G            ++   
Sbjct: 1406 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGG------------EQTLF 1453

Query: 447  NAIG-GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS--CGRMLTVGLTGLG 503
               G GK+F  G    GRLG    E   +PT +  +      Q S   G    + L+  G
Sbjct: 1454 TVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1513

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +VY+ G  V G+LG+          +   L+ + +  +++G  H A + + G +YTWGK 
Sbjct: 1514 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1573

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
              G+LG  DS+++  P  V AL+D  V  V CG+     +C+
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1615



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 21/277 (7%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           + +++ WG N+   D +G  +   H  P    D L  ++V++V  G      V+  G+++
Sbjct: 429 AAKVFVWGLND--KDQLGGLKGSKHKTPVASKD-LQRLKVTQVIGGSKSLFAVTMGGKVY 485

Query: 392 TYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
             G+ T G LG G +  +VS+  +V   + +K  +V  G  H  A+              
Sbjct: 486 ACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMAL-----------TYD 534

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WGD ++G+LGH      L P  +    +      SCG   +  +   G +YT G 
Sbjct: 535 GHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGH 594

Query: 511 AVHGQLGNPK----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            ++G+LG+       K + +  + G+   +   G  S       LT  G VY+WG    G
Sbjct: 595 GMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACG--SRDAQTLCLTQDGLVYSWGDGDFG 652

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +LG G S     P  VE L  + V  + CG+  + A+
Sbjct: 653 KLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL 689



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           + LDGV+          ++    + ++F +G      LG         P   + L+ LKV
Sbjct: 406 NVLDGVKPRSKRKSRKSSSKKDCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKV 465

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC--VTRL 481
             V  G     A+            +GGK++  G++  GRLG       L P    V+RL
Sbjct: 466 TQVIGGSKSLFAV-----------TMGGKVYACGESTSGRLG-------LGPVTGSVSRL 507

Query: 482 VDFDFVQA-------SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
               F Q        S GR   + LT  G VY+ G    G+LG+    D           
Sbjct: 508 TQVLFPQPIKKLAVHSGGRH-AMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFP 566

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
           E+ ++ IS GS H A + S G++YTWG    G+LG G++     P  V+AL  +QV  V 
Sbjct: 567 EKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVA 626

Query: 595 CGSSITAAICL 605
           CGS     +CL
Sbjct: 627 CGSRDAQTLCL 637



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            PKL+ES   + V  +S+G+ H       G+V+ WG+  +G++G         P+LV  L 
Sbjct: 1699 PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQ 1758

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
            G ++  VSCG   T A +   E     HN H      +RR     LP ++
Sbjct: 1759 GHHISHVSCGSAHTVAWSLPSE----SHNMH------KRRRTGAKLPDQI 1798


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2977 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3036

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3037 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3093

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3094 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3153

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3154 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3202

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3203 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3261

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3262 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3958 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4008

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4009 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4068

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4069 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4125

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4126 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4176

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4236

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4237 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4292

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4293 LQGKKVNRVACGSAHTLAWSTSKPASAG 4320



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3012 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3072 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3131

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3132 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3188

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3189 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3237

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3238 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3297

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3298 VQG-LEGQKITRVACGSSHSVAWTT 3321



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2949 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3005

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3058

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3059 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3114

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3115 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3172

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3173 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3215



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3946 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4002

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4003 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4062

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4122

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4123 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4182

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4183 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4242

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4243 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4300

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4301 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4336



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4120 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4171

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4172 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4225

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4226 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4283

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4284 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4314



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2900 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2957

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2958 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3006

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3007 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3066

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3067 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3126

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3127 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3163


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2922 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2981

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2982 LSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3038

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3039 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3098

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3099 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 3147

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3148 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3206

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3207 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3903 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3953

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3954 GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4013

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G   SRS     ++ ++L GV V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4014 G---SRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4070

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4071 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4121

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4181

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4182 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4237

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4238 LQGKKVNRVACGSAHTLAWSTSKPTSAG 4265



 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 18/299 (6%)

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S+ M+    +  G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++
Sbjct: 2983 SSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 3042

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
             ++CG   + ALT SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG
Sbjct: 3043 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACG 3099

Query: 378  --EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
              +  T  ++  G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A
Sbjct: 3100 SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLA 3159

Query: 436  IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
            +              G ++TWG  D  RLGH        P  V  L     V  + G + 
Sbjct: 3160 LTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALH 3208

Query: 496  TVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             + +T  G+VY  G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3209 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3266



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 355 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN 409

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 410 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 455

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 456 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 504

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML--TVGLTGLGKVYTMGSAV 512
           TWG  +  RL H       +   ++ L    F+  SCG     T+     G+V++ G   
Sbjct: 505 TWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGD 564

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 565 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 624

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 625 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 671



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 165/394 (41%), Gaps = 51/394 (12%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 365 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYT----------QAYNSDTLA 414

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 415 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 468

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +  L HG          +
Sbjct: 469 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMI 528

Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
             L   K    +CG         I   +  +    G++++WGD D G+LG    +    P
Sbjct: 529 SGLDRQKFIYKSCG---------IRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTP 579

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLK 534
             + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG L+
Sbjct: 580 KLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQ 638

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
            + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  + 
Sbjct: 639 GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIA 698

Query: 595 CGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           CG + + A            SSCS+     R+PF
Sbjct: 699 CGPAQSFA-----------WSSCSEWSIGLRVPF 721



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2900 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 2956

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 2957 GEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT-----------VD 3005

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3006 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3065

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3066 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3123

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3124 KLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 3160



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 162/403 (40%), Gaps = 71/403 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3891 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3947

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3948 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4007

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4008 DGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4067

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4068 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4127

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4128 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4187

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4188 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4245

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGK-PSRVCDTCYNHLQKI 675
              CG     A ST K  +A      GK P++V   C NHLQ+I
Sbjct: 4246 VACGSAHTLAWSTSKPTSA------GKLPAQVPMEC-NHLQEI 4281



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4065 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4116

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4117 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4170

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4171 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4228

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4229 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4259



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G   TA + T  ++F
Sbjct: 2845 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGSSGSLIRKKAAGLESTATIRT--KVF 2902

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2903 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2951

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2952 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSW 3011

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3012 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3071

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3072 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3108



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 557 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 606

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 607 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 666

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 667 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 700



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 30/185 (16%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           + G+V+ WG+G  G+LG   +     PKL+E L  ++V  V CG   + ALTK G++Y+W
Sbjct: 553 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 339 GHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           G  +     HG +         H    KL + L G +V  VA G  H   ++   ++ ++
Sbjct: 613 GKGDNQRLGHGTE--------EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVK---SVACGP-----------WHTAAIVDI 439
           G        H +   V++P E  +L GL  K    +ACGP           W     V  
Sbjct: 665 GSND--QCQHFDTLRVTKP-EPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLRVPF 721

Query: 440 MVDRC 444
           +VD C
Sbjct: 722 VVDIC 726


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2975 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3034

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3035 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3091

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3092 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3151

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3152 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3200

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3201 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3259

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3260 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 160/317 (50%), Gaps = 22/317 (6%)

Query: 302  VSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    G R       P
Sbjct: 3967 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDR--P 4024

Query: 360  RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            R + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++  +PK VE+L+
Sbjct: 4025 R-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 4083

Query: 420  GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
            G +V  +ACG      +       C ++     +++WGD D G+LG    +   +P  + 
Sbjct: 4084 GHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4134

Query: 480  RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKE 535
             L     V+  CG   +V LT  G VYT G   + +LG+       + R +  ++GK   
Sbjct: 4135 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK-- 4192

Query: 536  EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
              V  I++GS H    T  G VYTWG N  GQLG G +   + P  V AL+ ++V  V C
Sbjct: 4193 --VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVAC 4250

Query: 596  GSSITAAICLHKSISVG 612
            GS+ T A    K  S G
Sbjct: 4251 GSAHTLAWSTSKPASAG 4267



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3010 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3070 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3129

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3130 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3186

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3187 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3235

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3236 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3295

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3296 VQG-LEGQKITRVACGSSHSVAWTT 3319



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 147/303 (48%), Gaps = 26/303 (8%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P LLES   + ++ +++  G KH   ++ EGEV+ WGE +DG+LGH        P+++E 
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            L GI V  V+ G   +  +T +G++YTWG   +G   +G   S     P KL + L G R
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 4086

Query: 371  VSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            V  +AC  G+  T  ++    ++++GDG +G LG G       P +++SL GL V  V C
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4146

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G   + A+              G ++TWG  D  RLGH   +    P  V  L     + 
Sbjct: 4147 GSQFSVALTK-----------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4195

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
             + G +  V  T  G+VYT G    GQLG    N   + R +  ++GK     V  ++ G
Sbjct: 4196 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACG 4251

Query: 545  SYH 547
            S H
Sbjct: 4252 SAH 4254



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2947 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3003

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3056

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3057 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3112

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3113 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3170

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3171 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3213



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 4083 QGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4134

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 4135 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4194

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 4195 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4251

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4252 SAHTLAWSTS 4261



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2898 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2955

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2956 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3004

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3005 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3064

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3065 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3124

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3125 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3161



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 124/327 (37%), Gaps = 66/327 (20%)

Query: 407  QNVSQPKEVESLRGLKVKSVAC--GPWHTAA----------------------------- 435
            ++VS P  +ES++ + +K VA   G  H  A                             
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 4024

Query: 436  ----------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
                      +VD+      S  +   G L+TWG    GRLGH D E +L P  V  L  
Sbjct: 4025 RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 4084

Query: 484  FDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
               V  +CG     T+ LT    V++ G   +G+LG   +    + +    L    V  +
Sbjct: 4085 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4144

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
              GS     LT  G+VYTWGK    +LG G       P  V+ L+ ++V ++  GS    
Sbjct: 4145 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS--LH 4202

Query: 602  AICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKK 648
             +C  +   V             G  ++  + R+    + KK N   CG     A ST K
Sbjct: 4203 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK 4262

Query: 649  IINASLTPNKGKPSRVCDTCYNHLQKI 675
              +A   P +          YNHLQ+I
Sbjct: 4263 PASAGKLPAQ------VPMEYNHLQEI 4283


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3102

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3163 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGA 3270

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 191/393 (48%), Gaps = 40/393 (10%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3968 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4018

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4078

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A ++ +G LFT+G G +G LGHG+ ++
Sbjct: 4079 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4136 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4186

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT---------MGSAVHGQLGNP 519
             +   +P  +  L     V+  CG   +V LT  G VYT         +G      +  P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRP 4246

Query: 520  KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
                R +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P
Sbjct: 4247 ----RQVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298

Query: 580  TFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
              V AL+ +++  V CGS+ T A    K  + G
Sbjct: 4299 RLVAALQGKKINRVACGSAHTLAWSTSKPANAG 4331



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3059 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3226

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3227 --SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 196/444 (44%), Gaps = 75/444 (16%)

Query: 201 RLVTPTY----GSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLL 256
           RL TP       SP    K  L++V+ WG  ++G      V G             P   
Sbjct: 403 RLATPCMPPQCSSP-TSHKGSLQEVIAWG--LIGWKYYANVSG-------------PIQC 446

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINV 316
           E    L V  ++   K   ++++ G V+              N D   P+LV+ L+  N+
Sbjct: 447 EGLANLGVVQVACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLASRNI 496

Query: 317 QSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDGVRV 371
             ++         AL+ +GE+++WG  + G      R      +P    K+   L G + 
Sbjct: 497 VKIAAHSDGHHYLALSANGEVFSWGCGDGG------RLGHGDTVPLEEPKMISALSGKQA 550

Query: 372 SK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  V+
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 428 CGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           CG     T A+ +            G++++WGD D G+LG    +    P  + +L D D
Sbjct: 611 CGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 659

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSG 544
            V+  CG   ++ LT  G+VYT G   + +LG+   +  R   ++EG LK + V  +++G
Sbjct: 660 IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAAG 718

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S H   LT    V++WG N   Q        +  P  +  L  + +  + CG + + A  
Sbjct: 719 STHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA-- 776

Query: 605 LHKSISVGDQSSCSQ----CRMPF 624
                     SSCS+     R+PF
Sbjct: 777 ---------WSSCSEWSIGLRVPF 791



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2958 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT------- 3067

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3068 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3181

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3956 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4063

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G ++T G  
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4184 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  +++  V CG   + ALTK G++YTWG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 796



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  ++G  R+    L    F   D           G  V K A G    A + T  ++F
Sbjct: 2909 HGLSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRT--KVF 2966

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2967 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3015

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GKV++ 
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3075

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +YTWG    G+L
Sbjct: 3076 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 3135

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3136 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4007 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G ++TWGK
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACITAAGDLFTWGK 4122

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG GDS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTV 4171


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 182/357 (50%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+   ++ G+K    VT EG+V+  GE  +GRLG  V+   V  P+ V  
Sbjct: 1817 VPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTA 1876

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 1877 LSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGK--LGHF-SRXNCDKPRLIEALKS 1933

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 1934 RRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVAC 1993

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 1994 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 2042

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2043 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2101

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2102 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 190/388 (48%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG V+G+  +  T  +AL       A +   Q I  G +    VT +G+++  G G 
Sbjct: 2799 GQLGG-VEGAKVKVPTPCEAL-------AALRPAQLIG-GEQTLFAVTADGKLYATGYGA 2849

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 2850 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2909

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 2910 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSED 2966

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +     D          +++WGD D G+LG   
Sbjct: 2967 QLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDD---------TVWSWGDGDYGKLGRGG 3017

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  V  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3018 SDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3077

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3078 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3133

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 3134 LQGKKVNRVACGSAHTLAWSTSKPASAG 3161



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 145/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH    +   P+L+E L    ++ ++CG   + AL
Sbjct: 1890 GGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAAL 1949

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLVGHRVVQVACGSRDAQTLALTDE 2006

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 2007 GLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK--------- 2057

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 2058 --SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYA 2115

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 2116 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2161



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 125/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  +   +VA G      V+  
Sbjct: 1789 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNAVQVAGGSKSLFAVTVE 1845

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P++V +L    VK VA   G  H  A+        
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALT------- 1898

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                  GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 1899 ----ADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGE 1954

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 1955 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACG--SRDAQTLALTDEGLVFSW 2012

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2013 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2055



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 21/214 (9%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDI 233
            H ++E+ +K +L  A       + HR+V    GS   +   + +D  V  WG+G  G   
Sbjct: 2961 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  DG   +   +VDAL          L    +  G++ +  +TK G V+ WG+G   R
Sbjct: 3015 RGGSDGC--KVPMKVDAL--------TGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHR 3064

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  +
Sbjct: 3065 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTT 3122

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             +   PR L   L G +V++VACG  HT   STS
Sbjct: 3123 NAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 3155



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 101/241 (41%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K A G    A + T  ++F +G      LG      +  P   E+L  L    VA
Sbjct: 1776 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVA 1833

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  V      +P  VT L  +  
Sbjct: 1834 GGSKSLFAVT-----------VEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVV 1882

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G      LT  GKV++ G    G+LG+    +     +   LK   ++ I+ G
Sbjct: 1883 KKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACG 1942

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A LTS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 1943 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLA 2002

Query: 605  L 605
            L
Sbjct: 2003 L 2003



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT--------- 2837

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 2838 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2895

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 2896 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGGLYTWGK 2953

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  V CGS     +CL +  +V
Sbjct: 2954 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTV 3002


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 175/347 (50%), Gaps = 28/347 (8%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG 322
            Q +  G     ++   G V   GEG  GRLG   + D+    ++  L G  V  +  SCG
Sbjct: 4035 QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCG 4094

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  V +++CG  H+
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHS 4151

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            A+V+  G++FT+G+G +G LG GN  N   P+ V +L G ++  VACG  HT A+     
Sbjct: 4152 AVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----- 4206

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +  G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT 
Sbjct: 4207 -----STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK 4261

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
             G VYT G      +G P+ + R+      + V+ G + E+    ++ G+ H   +TS G
Sbjct: 4262 DGHVYTFGQ--DRLIGLPEGRARNHNRPQQVPVLAGVVIED----VAVGAEHTLAITSTG 4315

Query: 556  SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             VY WG N+ GQLGLG +     PT +  L+ + +  +  G   +AA
Sbjct: 4316 DVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAA 4362



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 169/353 (47%), Gaps = 30/353 (8%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T  ++  G +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSV 424

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T G++F++G
Sbjct: 425 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +            G+L
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----------DGEL 532

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G   
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 590

Query: 513 HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY WG  A   L
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644

Query: 569 GLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           G G S+     P  VE L   ++  +  G S   A+     +     +S  QC
Sbjct: 645 GCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 697



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLVEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 29/278 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 4003 DVYLWGAGRHGQL---AEAGRNVMIPA---GAPSFSQAQQVICGQNCTFVIQANGTVLAC 4056

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4105

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4106 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGN 4165

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV T G  V+ +G    
Sbjct: 4166 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSTDGSMVWAFGDGDY 4221

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4222 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4259



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK VE L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLVEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPR 738



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDR 740



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 68/279 (24%)

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  ++++ E+Y WG N+    + G   ++   L  KL  +    +   +  G++ T ++S
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAPSFSDAQT--IEAGQYCTFVIS 419

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           T G +   G G++G LG G+  N S  K++       +K V+                  
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------------------ 461

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                        + KG  GH                             T+  T  G+V
Sbjct: 462 -------------SSKGSDGH-----------------------------TLAFTTEGEV 479

Query: 506 YTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           ++ G   +G+LG+  +  +    +++G L+ + V  +S+G  H A +T  G +YTWG+  
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG GDS  R  PT V+ + +  V  V CGSS T A+
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 28/239 (11%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3995 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMIPAGAPSFS--QAQQVICGQNCTFVI- 4047

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4048 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4097

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4153

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            +T+ G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+    S+
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSM 4212



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +T  G+V+ WG   +G+LG      V  P L+  L G N++ +S G 
Sbjct: 4298 IEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGR 4357

Query: 324  FQTCALT 330
              + A T
Sbjct: 4358 CHSAAWT 4364


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2981 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3040

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3041 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3097

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3098 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3157

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3158 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3206

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3207 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3265

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3266 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3964 GQLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKLYATGYGA 4014

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4015 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4074

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G  V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4075 GNRSPCDR--PR-VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4131

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4132 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4182

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4183 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4242

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    +  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4243 QVQGLQGKK----VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4298

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4299 LQGKKVNRVACGSAHTLAWSTSKPASAG 4326



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3016 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3076 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3135

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3136 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3192

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3193 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3241

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3242 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3301

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3302 VQG-LEGQKITRVACGSSHSVAWTT 3325



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 179/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   +V LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3952 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 4008

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4068

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4069 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4128

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4129 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4188

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4189 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4248

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4249 GKKVIAIATGS--LHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4306

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4307 VACGSAHTLAWSTSKPASAGKLPVQ------VPMEYNHLQEI 4342



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2953 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3009

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3062

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3063 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3118

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3119 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3176

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3177 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3219



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4126 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4177

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4178 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4231

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       ++ GE+YTWG N+ G   +G+  + +
Sbjct: 4232 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQ--LGDGTTNA 4289

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4290 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4320



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPSALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 770



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K A G    A + T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 2940 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2997

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      +P  +T L  +  
Sbjct: 2998 GGSKSLFAVT-----------VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVV 3046

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G      LT  GKV++ G    G+LG+    +     +   LK + ++ I+ G
Sbjct: 3047 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3106

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A LTS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 3107 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166

Query: 605  L 605
            L
Sbjct: 3167 L 3167


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3963 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4013

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4073

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4074 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4130

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4131 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4181

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4242 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4297

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4298 LQGKKVNRVACGSAHTLAWSTSKPASAG 4325



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3951 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4007

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4128 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4187

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4188 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4247

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4248 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4305

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4306 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4341



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4125 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4176

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4177 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4230

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4231 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4288

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4289 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3966 GQLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKLYATGYGA 4016

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4017 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G  V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4077 GNRSPCDR--PR-VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4134 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4184

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    +  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4245 QVQGLQGKK----VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4301 LQGKKVNRVACGSAHTLAWSTSKPASAG 4328



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 179/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   +V LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3954 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 4010

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4131 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4190

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4191 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4250

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4251 GKKVIAIATGS--LHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4308

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4309 VACGSAHTLAWSTSKPASAGKLPVQ------VPMEYNHLQEI 4344



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3064

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3065 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4128 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4179

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4180 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4233

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       ++ GE+YTWG N+ G   +G+  + +
Sbjct: 4234 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQ--LGDGTTNA 4291

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4292 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPSALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 770



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K A G    A + T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 2942 GSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 2999

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      +P  +T L  +  
Sbjct: 3000 GGSKSLFAVT-----------VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVV 3048

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G      LT  GKV++ G    G+LG+    +     +   LK + ++ I+ G
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 3108

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A LTS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 3109 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 605  L 605
            L
Sbjct: 3169 L 3169


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 195/401 (48%), Gaps = 50/401 (12%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3984 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4030

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4031 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4090

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4091 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4147

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVK---------SVACGPWHTAAIVDIMVDRCKSN 447
             +G LG GN  N   P+ V +L G ++          SVACG  HT A+          +
Sbjct: 4148 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV----------S 4197

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
            A G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT  G+VYT
Sbjct: 4198 ADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYT 4257

Query: 508  MGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
             G      +G P+ + R+      + V+ G + E+    ++ G+ H   LTS G +Y WG
Sbjct: 4258 FGQ--DRLIGLPEGRARNHNRPQQVPVLAGVVIED----VAVGAEHTLALTSTGDIYAWG 4311

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             N+ GQLGLG +     PT V  L+ + V  +  G   +AA
Sbjct: 4312 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLSLTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ V  G+
Sbjct: 668 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 164/340 (48%), Gaps = 40/340 (11%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +V+ WG G+ G+L  +   +V  P      S    Q V CG+  T  +  +G +   G  
Sbjct: 3984 DVYLWGAGRHGQLA-EAGRNVMVPAAAPSFS--QAQQVICGQNCTFVIQANGTVLACGEG 4040

Query: 342  NHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKV--ACG-EWHTAIVSTSGQLFTYGDGT 397
            ++G   +G+  S   H L   +   L G  V+++  +CG + H+  ++ SG++F++GDG 
Sbjct: 4041 SYGR--LGQGNSDDLHVL--TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4096

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +G LGHGN     +P+++E+L+G +V  ++CG  H+A +              GKLFT+G
Sbjct: 4097 YGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----------DGKLFTFG 4145

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQA---------SCGRMLTVGLTGLGK-VYT 507
            + D GRLG  +   K LP  VT L  +   QA         +CG   T+ ++  G  V+ 
Sbjct: 4146 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWA 4205

Query: 508  MGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
             G   +G+LG      K+  + + V+ G      +K ++ G+     LT  G VYT+G++
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGI----GIKKVACGTQFSVALTKDGQVYTFGQD 4261

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                L  G ++    P  V  L    +E V  G+  T A+
Sbjct: 4262 RLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4301



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 157/335 (46%), Gaps = 37/335 (11%)

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H+  +T+ GEVF WG+G  G+LGH  +     P+ +E L G  V  +SCG   +  +T  
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4138

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK---------VACGEWHTAI 383
            G+++T+G+ ++G   +G   ++   LP ++   L+G ++ +         VACG  HT  
Sbjct: 4139 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQARNKSIICSVACGLNHTLA 4195

Query: 384  VSTSGQL-FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            VS  G + + +GDG +G LG GN    S P++V+ L G+ +K VACG   + A+      
Sbjct: 4196 VSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK---- 4251

Query: 443  RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                    G+++T+G      L          P  V  L        + G   T+ LT  
Sbjct: 4252 -------DGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTST 4304

Query: 503  GKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SV 557
            G +Y  GS   GQLG    N   +   +TV++GK     V+ IS+G  H A  T+     
Sbjct: 4305 GDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----NVRQISAGRCHSAAWTAPPVPP 4360

Query: 558  YTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
               G +   QLGL D+     P    ALR+  + +
Sbjct: 4361 RAPGVSVPLQLGLPDA----VPPQYGALREVSIHT 4391



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTALPR 738



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 37/242 (15%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3976 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4028

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4029 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4078

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             ++ LT  G+V++ G   +G+LG+  +    + R I  ++G   EE V+ +S G  H AV
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG---EEVVQ-MSCGFKHSAV 4134

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE---------SVVCGSSITA 601
            +TS G ++T+G    G+LGLG++  ++ P  V AL   Q+          SV CG + T 
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 602  AI 603
            A+
Sbjct: 4195 AV 4196



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +T  G+++ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4288 IEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4347

Query: 324  FQTCALT 330
              + A T
Sbjct: 4348 CHSAAWT 4354


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3965 GQLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKLYATGYGA 4015

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4016 GGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G  V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4076 GNRSPCDR--PR-VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4133 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4183

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    +  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4244 QVQGLQGKK----VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4300 LQGKKVNRVACGSAHTLAWSTSKPASAG 4327



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 179/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3953 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALAALRPVQLIGGEQTLFAVTADGKLY 4009

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4130 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4189

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4190 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4249

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4250 GKKVIAIATGS--LHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4307

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4308 VACGSAHTLAWSTSKPASAGKLPVQ------VPMEYNHLQEI 4343



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3064

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3065 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4127 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4178

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4179 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4232

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       ++ GE+YTWG N+ G   +G+  + +
Sbjct: 4233 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQ--LGDGTTNA 4290

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4291 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPSALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 770



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + + A G    A + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRRKAAGLESAATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2678 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2737

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2738 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2794

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2795 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2854

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2855 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2903

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2904 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2962

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2963 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3659 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3709

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3710 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3769

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3770 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3826

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 3827 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3877

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3937

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3938 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3993

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 3994 LQGKKVNRVACGSAHTLAWSTSKPASAG 4021



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2713 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 2773 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2832

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 2833 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2889

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 2890 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 2938

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 2939 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 2998

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 2999 VQG-LEGQKITRVACGSSHSVAWTT 3022



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2650 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2706

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 2759

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 2760 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2815

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 2816 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 2873

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2874 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2916



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3647 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3703

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 3704 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 3754

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3814

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 3815 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3874

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 3875 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3908



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 3821 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 3872

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 3873 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 3926

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 3927 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 3984

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 3985 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4015



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 37/218 (16%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 379 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 433

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 434 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 479

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 480 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 528

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TWG  + GRLGH   E + +P  V  L     +  +CG
Sbjct: 529 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 566



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 25/194 (12%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 389 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 438

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 439 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 492

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 493 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 552

Query: 416 ESLRGLKVKSVACG 429
             L+GLKV  VACG
Sbjct: 553 AGLKGLKVIDVACG 566



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2601 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2658

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2659 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2707

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2708 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2767

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 2768 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 2827

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 2828 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2864



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3647 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3697

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3698 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3755

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 3756 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 3813

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 3814 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTV 3862



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 27/206 (13%)

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           +G++G     NV  P + E L  L V  +AC     A    +++ R       G+++T  
Sbjct: 383 WGLIGWKYYANVIGPIQCEGLANLGVTQIAC-----AEKRFLILSR------NGRVYT-- 429

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
                          L P  V  L   + V+  A       + L   G+VY+ G    G+
Sbjct: 430 --------QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGR 481

Query: 516 LGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           LG+    P  + + I+   GK   + V  I+ GS + A +T+ G +YTWG+   G+LG G
Sbjct: 482 LGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 541

Query: 572 DSQERETPTFVEALRDRQVESVVCGS 597
            S++   P  V  L+  +V  V CGS
Sbjct: 542 SSEDEAIPMLVAGLKGLKVIDVACGS 567



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 31/188 (16%)

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFT--YGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           L  + V+++AC E    I+S +G+++T  Y   T              P+ V+ L    +
Sbjct: 403 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLA------------PQLVQGLASRNI 450

Query: 424 KSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG----ERKLLPTC 477
             +A      H  A+           A  G++++WG  D GRLGH D     E K++   
Sbjct: 451 VKIAAHSDGHHYLAL-----------AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 499

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
             +      V  +CG   +  +T  G++YT G   +G+LG+  ++D +I ++   LK   
Sbjct: 500 SGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK 559

Query: 538 VKGISSGS 545
           V  ++ GS
Sbjct: 560 VIDVACGS 567



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 14/128 (10%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK- 539
           L +    Q +C     + L+  G+VYT   A +     P+       +V+G      VK 
Sbjct: 403 LANLGVTQIACAEKRFLILSRNGRVYT--QAYNSDTLAPQ-------LVQGLASRNIVKI 453

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ----VESVVC 595
              S  +H   L + G VY+WG    G+LG GD+   E P  + A   +Q    V  + C
Sbjct: 454 AAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 513

Query: 596 GSSITAAI 603
           GS+ +AAI
Sbjct: 514 GSTYSAAI 521


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2987 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3046

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3047 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3103

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3104 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3163

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3164 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3212

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3213 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3271

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3272 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3968 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4018

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4078

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4079 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4135

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4136 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4186

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4247 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4303 LQGKKVNRVACGSAHTLAWSTSKPASAG 4330



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3022 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3082 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3141

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3142 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3198

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3199 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3247

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3248 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3307

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3308 VQG-LEGQKITRVACGSSHSVAWTT 3331



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 380 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 429

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 483

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 592

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 593 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 651

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 652 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 711

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 712 IACGPAQSFA-----------WSSCSEWSIGLRVPF 736



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 424

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 425 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 470

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 471 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 519

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 580 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 640 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 686



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2959 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3015

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3068

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3069 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3124

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3125 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3182

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3183 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3225



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3956 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4132

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4133 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4192

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4193 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4252

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4253 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4310

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4311 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4346



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4130 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4181

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4182 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4235

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4236 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4293

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4294 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4324



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 536 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 595

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 596 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 647

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 648 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 704

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 705 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 741



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 572 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 621

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 681

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 682 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 715



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2910 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2967

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2968 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3016

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3017 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3076

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3077 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3136

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3137 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3173


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3966 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4016

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4077 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4133

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4134 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4184

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4245 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4300

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4301 LQGKKVNRVACGSAHTLAWSTSKPASAG 4328



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 14/203 (6%)

Query: 244  NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
            N TQ+   + K+L    ++ V   S  A+  AL T EG VF WG+G  G+LG   +   +
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL-TDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 304  CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWL 358
             P+ +E L+G  V  + CG   + ALTKSG ++TWG  +     HG+D+        H  
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV--------HVR 3247

Query: 359  PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
              ++ + L G ++  VA G  H   V+ +GQ++ +GD   G  G+G      +P  V+ L
Sbjct: 3248 KPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGL 3307

Query: 419  RGLKVKSVACGPWHTAAIVDIMV 441
             G K+  VACG  H+ A   I V
Sbjct: 3308 EGQKITRVACGSSHSVAWTTIDV 3330



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3064

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3065 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3954 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4010

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4131 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4190

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4191 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4250

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4251 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4308

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4309 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4344



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 21/214 (9%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDI 233
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  V  WG+G  G   
Sbjct: 4128 HSDSEDQLKPKLVEA------LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4181

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  DG            +P  ++S   L V  +  G++ +  +TK G V+ WG+G   R
Sbjct: 4182 RGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4231

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  +
Sbjct: 4232 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTT 4289

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             +   PR L   L G +V++VACG  HT   STS
Sbjct: 4290 NAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 651 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 770



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 169/334 (50%), Gaps = 16/334 (4%)

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGE 334
            VT EG+VF  G G  GRLG   N  V+ P L+E +  +++   SV+ G     AL+  GE
Sbjct: 1454 VTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +Y+WG    G    G R S  H  PR + ++L G  + KVA G  H+A ++ +G L+T+G
Sbjct: 1514 VYSWGEGVDGKLGHGNRSSLDH--PR-IIESLRGDLIVKVATGGSHSAAINATGGLYTWG 1570

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK-- 452
             G +G LGH + ++  +PK V +L+   V  VACG      +       C +   GG   
Sbjct: 1571 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTL-------CITEGTGGSSV 1623

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +++WGD D G+LG    +   +P  +  L+       +CG   ++ L+  G VYT G   
Sbjct: 1624 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGD 1683

Query: 513  HGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            + +LG+   +  R   ++E  L+   V  +S GS H       G VYTWG N  GQ+G G
Sbjct: 1684 YYRLGHGSDEHVRRPKLIE-SLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDG 1742

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             +Q  + P  V AL+   +  V CGS+ T A  L
Sbjct: 1743 TTQATQIPRLVAALQGHHISHVSCGSAHTVAWSL 1776



 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 167/344 (48%), Gaps = 15/344 (4%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVS 320
           L V  +  G+K    VT  G+V+  GE   GRLG   V   VS    V     I   +V 
Sbjct: 462 LKVTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVH 521

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G     ALT  G +Y+WG    G   +G         PRK+ +T     +  ++CG  H
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGK--LGHGSRADALTPRKI-ETFPEKCIRDISCGSSH 578

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +A + +SG L+T+G G +G LGHGN   + +PK V++L G +V  VACG      +    
Sbjct: 579 SAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTL---- 634

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
              C +    G +++WGD D G+LG    +   +P  V RL   D V+  CG   ++ L+
Sbjct: 635 ---CLTQ--DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALS 689

Query: 501 GLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             G V+T G   + +LG+   +  R   VVEG L+E  V  ++ G+ H   +T GG V+ 
Sbjct: 690 RCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFA 748

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           WG N +GQ G G +     P  V+ L   ++  + CGSS + A 
Sbjct: 749 WGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 142/286 (49%), Gaps = 25/286 (8%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
           G V GSVS+  TQV  L P+ ++         +  G +HA  +T +G V+ WG+G++G+L
Sbjct: 497 GPVTGSVSR-LTQV--LFPQPIKKLA------VHSGGRHAMALTYDGHVYSWGDGEEGKL 547

Query: 295 GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
           GH    D   P+ +E      ++ +SCG   + A+  SG +YTWGH  +G   +G   + 
Sbjct: 548 GHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR--LGHGNNH 605

Query: 355 SHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           +   P+ +   L G +V +VACG  +  T  ++  G ++++GDG FG LG G       P
Sbjct: 606 TLLKPKPV-QALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVP 664

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           K VE L G  V  + CG     A   + + RC      G ++TWG  D  RLGH   +  
Sbjct: 665 KPVERLSGQDVVKIECG-----AQFSLALSRC------GLVWTWGKGDYFRLGHGSDQHV 713

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             P  V  L +   V  + G +  + +T  G+V+  G   HGQ GN
Sbjct: 714 RRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGN 759



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 139/306 (45%), Gaps = 22/306 (7%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P L+ES   + +  +S+  G KH   ++ EGEV+ WGEG DG+LGH     +  P+++E
Sbjct: 1481 IPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIE 1540

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L G  +  V+ G   + A+  +G +YTWG   +G   +G   S     P KL + L   
Sbjct: 1541 SLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGR--LGHEDSEDQLKP-KLVNALKDN 1597

Query: 370  RVSKVACGEWH------TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             V  VACG         T     S  ++++GDG +G LG G       P  +++L G  +
Sbjct: 1598 LVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHI 1657

Query: 424  KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
              VACG   + A+           +  G ++TWG  D  RLGH   E    P  +  L  
Sbjct: 1658 THVACGSQFSLAL-----------SKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRG 1706

Query: 484  FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
               V+ S G +  +     G VYT G    GQ+G+   +   I  +   L+   +  +S 
Sbjct: 1707 MKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSC 1766

Query: 544  GSYHVA 549
            GS H  
Sbjct: 1767 GSAHTV 1772



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 57/247 (23%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           ++ DAL P+ +E+     +++IS G+ H+A +   G ++ WG G  GRLGH  N  +  P
Sbjct: 551 SRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKP 610

Query: 306 KLVECLSGINVQSVSCG--EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
           K V+ LSG  V  V+CG  + QT  LT+ G +Y+WG  + G   +G   S    +P+ + 
Sbjct: 611 KPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGK--LGRGGSDGCCVPKPV- 667

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR---- 419
           + L G  V K+ CG   +  +S  G ++T+G G +  LGHG+ Q+V +P+ VE LR    
Sbjct: 668 ERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKV 727

Query: 420 ------------------------------------------------GLKVKSVACGPW 431
                                                           G+K+  +ACG  
Sbjct: 728 VDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSS 787

Query: 432 HTAAIVD 438
           H+ A  D
Sbjct: 788 HSIAFAD 794



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 26/288 (9%)

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            T +   SG I+ WGHN+ G   +G        +P     +L  ++  ++  GE     V+
Sbjct: 1399 TLSWVGSGSIFGWGHNHRGQ--LGGPEGAKVKIPIPC-PSLAALKPIQLVGGEQTLFTVT 1455

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK--SVACGPWHTAAIVDIMVDR 443
              G++F  G G  G LG G+ ++V+ P  +ES++ + +   SV  G  H  A+       
Sbjct: 1456 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILAL------- 1508

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGLTG 501
              SN   G++++WG+   G+LGH  G R  L  P  +  L     V+ + G   +  +  
Sbjct: 1509 --SNE--GEVYSWGEGVDGKLGH--GNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINA 1562

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT----SGGS- 556
             G +YT G   +G+LG+  ++D+    +   LK+  V  ++ G+     L     +GGS 
Sbjct: 1563 TGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSS 1622

Query: 557  -VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             V++WG    G+LG G S   + P  ++ L  + +  V CGS  + A+
Sbjct: 1623 VVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLAL 1670



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 15/222 (6%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG +F +G    G LG      V  P    SL  LK   +  G            ++   
Sbjct: 1405 SGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGG------------EQTLF 1452

Query: 447  NAIG-GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS--CGRMLTVGLTGLG 503
               G GK+F  G    GRLG    E   +PT +  +      Q S   G    + L+  G
Sbjct: 1453 TVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1512

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +VY+ G  V G+LG+          +   L+ + +  +++G  H A + + G +YTWGK 
Sbjct: 1513 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1572

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
              G+LG  DS+++  P  V AL+D  V  V CG+     +C+
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1614



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 21/277 (7%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           + +++ WG N+   D +G  +   H  P    D L  ++V++V  G      V+  G+++
Sbjct: 428 AAKVFVWGLND--KDQLGGLKGSKHKTPVASKD-LQRLKVTQVIGGSKSLFAVTMGGKVY 484

Query: 392 TYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
             G+ T G LG G +  +VS+  +V   + +K  +V  G  H  A+              
Sbjct: 485 ACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMAL-----------TYD 533

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WGD ++G+LGH      L P  +    +      SCG   +  +   G +YT G 
Sbjct: 534 GHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGH 593

Query: 511 AVHGQLGNPK----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            ++G+LG+       K + +  + G+   +   G  S       LT  G VY+WG    G
Sbjct: 594 GMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACG--SRDAQTLCLTQDGLVYSWGDGDFG 651

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +LG G S     P  VE L  + V  + CG+  + A+
Sbjct: 652 KLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL 688



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 106/251 (42%), Gaps = 28/251 (11%)

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           + LDGV+          ++    + ++F +G      LG         P   + L+ LKV
Sbjct: 405 NVLDGVKPRSKRKSRKSSSKKDCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKV 464

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC--VTRL 481
             V  G     A+            +GGK++  G++  GRLG       L P    V+RL
Sbjct: 465 TQVIGGSKSLFAV-----------TMGGKVYACGESTSGRLG-------LGPVTGSVSRL 506

Query: 482 VDFDFVQA-------SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
               F Q        S GR   + LT  G VY+ G    G+LG+    D           
Sbjct: 507 TQVLFPQPIKKLAVHSGGRH-AMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFP 565

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
           E+ ++ IS GS H A + S G++YTWG    G+LG G++     P  V+AL  +QV  V 
Sbjct: 566 EKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVA 625

Query: 595 CGSSITAAICL 605
           CGS     +CL
Sbjct: 626 CGSRDAQTLCL 636



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            PKL+ES   + V  +S+G+ H       G+V+ WG+  +G++G         P+LV  L 
Sbjct: 1698 PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQ 1757

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
            G ++  VSCG   T A +   E     HN H      +RR     LP ++
Sbjct: 1758 GHHISHVSCGSAHTVAWSLPSE----SHNMH------KRRRTGAKLPDQI 1797


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2734 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2793

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2794 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2850

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2851 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2910

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2911 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2959

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2960 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3018

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3019 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3715 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLLAVTADGKLYATGYGA 3765

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3766 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3825

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3826 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3882

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 3883 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3933

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3934 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3993

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3994 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4049

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4050 LQGKKVNRVACGSAHTLAWSTSKPASAG 4077



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 2829 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2888

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 2889 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2945

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 2994

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 2995 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3054

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3055 VQG-LEGQKITRVACGSSHSVAWTT 3078



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 163/353 (46%), Gaps = 40/353 (11%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L V  I+   K   +V + G V               N D   P+LV+ L+  NV  ++ 
Sbjct: 428 LGVTQIACAEKRLLIVXRNGRVXT----------QAYNSDTLVPQLVQGLASRNVVKIAA 477

Query: 322 GE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDGVRVSK--- 373
                   AL  +GE+Y+WG  +      G R      +P    K+     G +  K   
Sbjct: 478 HSDGHHYLALAATGEVYSWGCGD------GRRLGHGDTVPLEEPKVISAFSGKQAGKHVV 531

Query: 374 -VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP-- 430
            +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  VACG   
Sbjct: 532 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 591

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
             T A+ +            G++++WGD D G+LG    +    P  + +L D D V+  
Sbjct: 592 AQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVR 640

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVA 549
           CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG L+ + V  +++GS H  
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAAGSTHCL 699

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            LT    V++WG N   Q        +  P  +  L  + +  + CG + ++A
Sbjct: 700 ALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSSA 752



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 36/339 (10%)

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           G +G K   +V  P   + L+ + V  ++C E +   + ++G + T  +N          
Sbjct: 406 GLIGWKYYANVIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN---------- 455

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
              S  L  +L   L    V K+A    G  + A+ +T G+++++G G    LGHG+   
Sbjct: 456 ---SDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAAT-GEVYSWGCGDGRRLGHGDTVP 511

Query: 409 VSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           + +PK + +  G +    V  +ACG  ++AAI              G+L+TWG  + GRL
Sbjct: 512 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELYTWGRGNYGRL 560

Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           GH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   +G+LG   + 
Sbjct: 561 GHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 620

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
                 +  KL++  V  +  GS     LT  G VY+WGK  N +LG G  +    P  +
Sbjct: 621 GCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 680

Query: 583 EALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
           E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 681 EGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 717



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2706 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 2815

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 2816 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2871

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 2872 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 2929

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2930 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2972



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3703 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLLAVTADGKLY 3759

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 3760 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 3810

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3870

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 3871 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3930

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 3931 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3964



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 3893 QGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 3944

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 3945 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4004

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 4005 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4061

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4062 SAHTLAWSTS 4071



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 21/197 (10%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 567 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 626

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 627 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 678

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 679 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 735

Query: 422 KVK---SVACGPWHTAA 435
             K    +ACGP  ++A
Sbjct: 736 DTKHIVGIACGPAQSSA 752



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 603 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 652

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 712

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 713 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 746



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2657 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2714

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2715 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2763

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2764 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2823

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 2824 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 2883

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 2884 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2920



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G      ++ +  D    
Sbjct: 3703 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGG---EQTLLAVTAD---- 3755

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3756 ----GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3811

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 3812 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 3869

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL
Sbjct: 3870 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3912


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3098

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3159 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3207

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3208 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3266

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3267 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3994 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4044

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4045 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4104

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4105 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4161

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4162 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4212

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4272

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4273 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4328

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4329 LQGKKVNRVACGSAHTLAWSTSKPASAG 4356



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3077 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3137 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3193

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3242

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3243 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3302

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3303 VQG-LEGQKITRVACGSSHSVAWTT 3326



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2954 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3063

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3064 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3177

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3982 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4038

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4039 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4089

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4149

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4150 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4209

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4210 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4243



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4156 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4207

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4208 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4261

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4262 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4319

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4320 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4350



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2905 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 2962

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2963 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3011

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3071

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3072 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3131

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3132 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3982 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4032

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4033 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4090

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4091 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4148

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4149 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTV 4197


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 200/370 (54%), Gaps = 34/370 (9%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVE 309
           L PK +E   + D+Q I+ G  H+  +TK G+V+ +G G  GRLGH  N D    PK +E
Sbjct: 69  LAPKKIEG--LSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHG-NTDSQLEPKKIE 125

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            LS  ++Q+++ G+F + ALTKSG++Y++G+   G   +G   +     P+K+    D  
Sbjct: 126 GLS--DIQAIAAGDFHSLALTKSGDVYSFGNGTSG---LGHGNTEDQSTPKKIESLSD-- 178

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V  +A G  H+  ++ SG ++++G G FG LGHG+  +  +PK++E L    ++++A G
Sbjct: 179 -VQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLS--DIQAIAAG 235

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             H+ A+        KS    G ++++G    G+LGH D E +L P  +  L D   V A
Sbjct: 236 GNHSLAL-------TKS----GDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQAVAA 284

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHV 548
                L   LT  G+VY+ G    GQLG+    D+ +   +EG LK+  ++ I++G +H 
Sbjct: 285 GANHSLA--LTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEG-LKD--IQAIAAGDFHS 339

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
             LT  G VY++G   +G LG GD+  +  P  +E L D  ++++  G++ + A+ + + 
Sbjct: 340 LALTKSGDVYSFGNGTSG-LGHGDTANQLEPKKIEGLTD--IQAIAAGANHSLALAVEEQ 396

Query: 609 ISVGDQSSCS 618
            S  D    S
Sbjct: 397 DSTIDPDEAS 406



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 173/308 (56%), Gaps = 27/308 (8%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           VF +G G  G+LGH    +   PK +E LS  ++Q+++ G   + ALTKSG++Y++G   
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGLS--DIQAIAAGTNHSLALTKSGDVYSFGFGL 106

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G   + S   P+K+    D   +  +A G++H+  ++ SG ++++G+GT G LG
Sbjct: 107 FGR--LGHGNTDSQLEPKKIEGLSD---IQAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           HGN ++ S PK++ESL    V+++A G  H+ A+        KS    G ++++G    G
Sbjct: 161 HGNTEDQSTPKKIESLS--DVQAIAAGGNHSLAL-------TKS----GDVYSFGFGLFG 207

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           RLGH D + +L P  +  L D   + A     L   LT  G VY+ G  +HGQLG+   +
Sbjct: 208 RLGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLA--LTKSGDVYSFGWGLHGQLGHGDTE 265

Query: 523 DRSITVVEGKLKE-EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
           ++   +   K+++   ++ +++G+ H   LT  G VY++G+   GQLG GD+ ++ TP  
Sbjct: 266 NQ---LTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKK 322

Query: 582 VEALRDRQ 589
           +E L+D Q
Sbjct: 323 IEGLKDIQ 330


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 189/393 (48%), Gaps = 30/393 (7%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 2982 QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 3028

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V+++G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 3029 KSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL 3088

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L + L   ++  VACG  H+A +S+ G+
Sbjct: 3089 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAKKIRDVACGSSHSAAISSQGE 3145

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 3146 LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGS-RDAQTLALTED------- 3197

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     VQ  CG   ++ LT  G+V+T G
Sbjct: 3198 -GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3256

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 3257 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             G++   + P  V  L    V  V CGSS + A
Sbjct: 3317 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4060 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4110

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4111 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 4171 GNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4227

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4228 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4276

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     V+  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4277 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4336

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 4337 PKKVAALQGK----KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4392

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4393 AALQGKHIVKVTCGSAHTLAL 4413



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 159/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4240

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4301 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4347

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 4348 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4403

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4404 TCGSAHTLALST 4415



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 23/247 (9%)

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            T+  +R   +A G     IVS  G+++  G+GT G LG G   NV  P ++  LR   VK
Sbjct: 3015 TISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVK 3074

Query: 425  SVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTR 480
             VA   G  H  A+            + GK+F+WG+ + G+LGH  G R  L  P  V  
Sbjct: 3075 KVAVHSGGKHALALT-----------LDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEA 3121

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  ++  G++YT G   +G+LG+     + K + +T + G+   +
Sbjct: 3122 LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ 3181

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G+V++WG    G+LG G S+  +TP  +E L    V  + CG
Sbjct: 3182 VACG--SRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECG 3239

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 3240 AQFSLAL 3246



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 34/302 (11%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             ++ V+C E Q   L++ G++YTW            R ++    P  + +    V +S 
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW------------RLAKPEAEPLPMEEVAHDVFISI 619

Query: 374 VA-CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
              C   H   + ++   +++G G    LGHG+    + P ++ +L    V+SV CG  +
Sbjct: 620 AGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSY 679

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +AAI             GG L TWG     RLGH + + + LPT V  L D   V  + G
Sbjct: 680 SAAIT-----------CGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALG 728

Query: 493 R--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
                ++ LT  G V+  G   +G+LGN         ++   L    V+ + +GS     
Sbjct: 729 SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR--VQRVFAGSQFSVA 786

Query: 551 LTSGGSVYTWGKNA--NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           L+S G +YTWGK      QL     Q    P  V +L+ +++  V    +++ A CL  S
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDV----AVSVAHCLALS 842

Query: 609 IS 610
            S
Sbjct: 843 SS 844



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 18/212 (8%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +H   +      + WG G+D RLGH      + P  +  L    VQSV CG   + A+T 
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITC 685

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS-KVACGEWHTAIVSTSGQL 390
            G + TWG   +    +G   S    LP  +    D + V   +  G+ H+  +++ G +
Sbjct: 686 GGNLLTWGRGTYAR--LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 743

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           F +GDG +G LG+GN     QP  VESL   +V+ V  G   + A+           +  
Sbjct: 744 FAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVAL-----------SSE 790

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           G+L+TWG A    LGH   ER +    V RLV
Sbjct: 791 GQLYTWGKATC--LGHQLVERSVQGCSVPRLV 820



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4262 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVVKVECGSQFSVALTK 4311

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4372 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4416



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 24/203 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           VQ++  G  ++A +T  G +  WG G   RLGH  + D S P LV  LS   V  V+   
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  + ALT  G ++ WG  ++G   +G         P  L ++L   RV +V  G   +
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDYGK--LGNGNCNGSLQP-ILVESLP--RVQRVFAGSQFS 784

Query: 382 AIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             +S+ GQL+T+G  T   LGH     ++Q  S P+ V SL+  ++  VA          
Sbjct: 785 VALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVA---------- 832

Query: 438 DIMVDRCKSNAIGGKLFTWGDAD 460
            + V  C + +  G++F WG  D
Sbjct: 833 -VSVAHCLALSSSGEVFGWGRND 854



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +  WG  DK +LG + G +  +PT    +     +  + G      ++  GKVY  G   
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG     +  +      L++  VK   + SG  H   LT  G V++WG+  +G+LG 
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+    + P  VEALR +++  V CGSS +AAI
Sbjct: 3108 GNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI 3140



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4099

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4100 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4159

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY 4217

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 4218 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4277

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 4278 GSDGCKLPY 4286



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            GK++  G+   GRLG        LP  +  L  +    V    G    + LT  GKV++ 
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L+ + ++ ++ GS H A ++S G +YTWG    G+L
Sbjct: 3098 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3157

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            G GD+  +  P  V AL  R+V  V CGS     + L +  +V
Sbjct: 3158 GHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAV 3200


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ V  
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTA 1346

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 1403

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 1404 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 1464 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 1512

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 1513 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 1571

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 1572 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 2271 GQLGG-IEGAKVKVPTPCEAL-------AALRPVQLIG-GEQTLFAVTADGKLYATGYGA 2321

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 2322 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2381

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G   SRS     ++ ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 2382 G---SRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 2438

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 2439 QLKPKLVEALQGHRVVGIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 2489

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 2490 SDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPR 2549

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK        I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 2550 QVQGLQGKK----AIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 2605

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 2606 LQGKKVNRVACGSAHTLAWSTSKPASAG 2633



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     LP+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 1322 GEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 1381

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 1382 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDT 1441

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 1442 TTQ---LKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 1498

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 1499 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 1547

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 1548 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 1607

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 1608 VQG-LEGQKITRVACGSSHSVAWTT 1631



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 24/272 (8%)

Query: 343  HGADLVGERRSRSHWLPR----KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            HG  L+G  R+    L         +TL  + V +VA G      V+  G+++  G+ T 
Sbjct: 1267 HGLILLGRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATN 1326

Query: 399  GVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G LG G +   V  P++V +L    VK VA   G  H  A+            + GK+F+
Sbjct: 1327 GRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALT-----------VDGKVFS 1375

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G   +G+
Sbjct: 1376 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1435

Query: 516  LGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            LG+     + K + + V+ G    +   G  S       LT  G V++WG    G+LG G
Sbjct: 1436 LGHGDTTTQLKPKMVKVLLGHRVVQVACG--SRDAQTLALTDEGLVFSWGDGDFGKLGRG 1493

Query: 572  DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             S+    P  +E L  + V  + CG+  + A+
Sbjct: 1494 GSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 1525



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 2433 HSDSEDQLKPKLVEA------LQGHRVVGIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 2484

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 2485 LGRGGSDGCK------VPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLG 2538

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G    +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 2539 HGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 2596

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 2597 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 2627



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 90/204 (44%), Gaps = 14/204 (6%)

Query: 405  NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
            +L  +  P   E+L  L V  VA G     A+            + GK++  G+A  GRL
Sbjct: 1281 DLAAIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEGKVYACGEATNGRL 1329

Query: 465  G-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
            G  +      LP  VT L  +    V    G      LT  GKV++ G    G+LG+   
Sbjct: 1330 GLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSR 1389

Query: 522  KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
             +     +   LK + ++ I+ GS H A LTS G +YTWG    G+LG GD+  +  P  
Sbjct: 1390 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKM 1449

Query: 582  VEALRDRQVESVVCGSSITAAICL 605
            V+ L   +V  V CGS     + L
Sbjct: 1450 VKVLLGHRVVQVACGSRDAQTLAL 1473



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 117/289 (40%), Gaps = 36/289 (12%)

Query: 329  LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
            L   GE     H +HG     +      W+ R+  D              W T     SG
Sbjct: 2216 LMADGEPLDVLHESHGVFRTEQDEQLVQWMHRRPDD--------------W-TLSAGGSG 2260

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
             ++ +G    G LG      V  P   E+L  L+   +  G     A+            
Sbjct: 2261 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT----------- 2309

Query: 449  IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVY 506
              GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+VY
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 507  TMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            + G A  G+LG+    P  + R I  + G      V  +++G  H A +T+ G +YTWGK
Sbjct: 2370 SWGEAEDGKLGHGSRSPCDRPRVIESLRGI----EVVDVAAGGAHSACVTAAGDLYTWGK 2425

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 2426 GRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTV 2474


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2985 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3044

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3045 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALRA 3101

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3102 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3161

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3162 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3210

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3211 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3269

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3270 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3967 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4017

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4018 GGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4077

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G   SRS     ++ ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4078 G---SRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4134

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4135 QLKPKLVEVLQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4185

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4246 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4301

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4302 LQGKKVNRVACGSAHTLAWSTSKPSSAG 4329



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3020 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3079

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3080 GKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3139

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3140 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3196

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3197 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3245

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3246 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3305

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3306 VQG-LEGQKITRVACGSSHSVAWTT 3329



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 159/328 (48%), Gaps = 20/328 (6%)

Query: 274  AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
            AA+ TK   VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G
Sbjct: 2958 AAVRTK---VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG 3014

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLF 391
            ++Y  G   +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F
Sbjct: 3015 KVYACGEATNGRLGLG-LSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVF 3072

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            ++G+G  G LGH +  N  +P+ +E+LR  +++ +ACG  H+AA+              G
Sbjct: 3073 SWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTS-----------SG 3121

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMG 509
            +L+TWG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G
Sbjct: 3122 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3181

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
                G+LG   ++  +I     +L  + V  I  G+     LT  G V+TWGK    +LG
Sbjct: 3182 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3241

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGS 597
             G       P  VE LR +++  V  G+
Sbjct: 3242 HGSDVHVRKPQVVEGLRGKKIVHVAVGA 3269



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 177/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+++WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVR----VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +    V  +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D + V+  CG   +V LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L  + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 707 LHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 159/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G++F++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVFSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L  ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPRLLEGLHGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 131/276 (47%), Gaps = 18/276 (6%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3955 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4011

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + ++ VA         V+     C + +  G
Sbjct: 4012 ATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVA---------VNSGGKHCLALSSEG 4062

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH        P  V  L   + V  + G   +  +T  G +YT G  
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 512  VHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
             +G+LG+  ++D    + + V++G    +   G  SG      LT   +V++WG    G+
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACG--SGDAQTLCLTDDDTVWSWGDGDYGK 4180

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G S   + P  +E+L    V  V CGS  + A+
Sbjct: 4181 LGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVAL 4216



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2963 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 3019

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3020 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3068

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3069 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGL 3128

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3129 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3186

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3187 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3223



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  +E
Sbjct: 4145 QGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKIE 4196

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 4197 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4256

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 4257 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4313

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4314 SAHTLAWSTS 4323



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
           L+E L  + V  V CG   + ALTK G++Y+WG  ++    +G         PR L + L
Sbjct: 651 LIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDN--QRLGHGTEEHVRYPR-LLEGL 707

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK-- 424
            G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL  K  
Sbjct: 708 HGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGLDTKHI 764

Query: 425 -SVACGP-----------WHTAAIVDIMVDRC 444
             +ACGP           W     V  +VD C
Sbjct: 765 VGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    L+V  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLEVVKVRCGSQFSVALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  P+L+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 770



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 104/241 (43%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K + G   +A V T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 2944 GSLIRKKSAGLESSAAVRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3001

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      +P  +T L  +  
Sbjct: 3002 GGSKSLFAVT-----------VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVV 3050

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G      LT  GKV++ G    G+LG+    +     +   L+ + ++ I+ G
Sbjct: 3051 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACG 3110

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A LTS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 3111 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3170

Query: 605  L 605
            L
Sbjct: 3171 L 3171


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2988 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3047

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3048 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3104

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3105 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3164

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3165 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3213

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3214 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3272

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3273 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3970 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4020

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4021 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4080

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4081 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4137

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4138 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4188

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4248

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4249 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4304

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4305 LQGKKVNRVACGSAHTLAWSTSKPASAG 4332



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3023 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3082

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3083 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3142

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3143 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3199

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3200 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3248

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3249 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3308

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3309 VQG-LEGQKITRVACGSSHSVAWTT 3332



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 440 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 489

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 490 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 543

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 544 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 603

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 604 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 652

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 653 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 711

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 712 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVG 771

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 772 IACGPAQSFA-----------WSSCSEWSIGLRVPF 796



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 430 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 484

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 485 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 530

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 531 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 579

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 580 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 639

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 640 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 699

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 700 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 746



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2966 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 3022

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3023 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3071

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3072 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3131

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3132 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3189

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3190 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3226



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3958 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4014

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4015 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4065

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4125

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4126 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4185

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4186 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4219



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4132 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4183

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4184 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4237

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4238 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4295

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4296 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4326



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 596 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 655

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 656 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 707

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 708 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGL 764

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 765 DSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 801



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 632 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 681

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 682 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 741

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 742 NDQCQHFDTLRVTKPE--PTAL-PGLDSKHIVGIACG 775



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2911 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 2968

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2969 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3017

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3018 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3077

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3078 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3137

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3138 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3174



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3958 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4008

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4009 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4066

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4067 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4124

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4125 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 4173


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3965 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4015

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4076 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4133 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4183

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4244 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4300 LQGKKVNRVACGSAHTLAWSTSKPASAG 4327



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 435 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2961 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 3017

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3066

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3184

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3185 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3953 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4009

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4060

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4127 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4178

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4179 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4232

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4233 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4290

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4291 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 651 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PTAL-PGLDSKHIVGIACG 770



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4004 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4119

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 4168


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GTRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3965 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4015

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4076 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4133 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4183

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4244 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4300 LQGKKVNRVACGSAHTLAWSTSKPASAG 4327



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 179/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 435 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG   +   R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 161/349 (46%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LGLG 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3953 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4009

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4060

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4181 RGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2961 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 3017

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3066

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G          LT  G V++WG    G
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDA--QTLALTDEGLVFSWGDGDFG 3184

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3185 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 21/214 (9%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDI 233
            H ++E+ +K +L  A       + HR++    GS   +   +  D  V  WG+G  G   
Sbjct: 4127 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  DGS           +P  ++S   L V  +  G++ +  +TK G V+ WG+G   R
Sbjct: 4181 RGGSDGSK----------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4230

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  +
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTT 4288

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             +   PR L   L G +V++VACG  HT   STS
Sbjct: 4289 NAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 22/212 (10%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
           L+E L  ++V  V CG   + ALTK G++Y+WG  ++    +G   +  H    KL + L
Sbjct: 651 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLG---TEEHVRYPKLLEGL 707

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK-- 424
            G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL  K  
Sbjct: 708 QGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGLDSKHI 764

Query: 425 -SVACGP-----------WHTAAIVDIMVDRC 444
             +ACGP           W     V  +VD C
Sbjct: 765 VGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CG+     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLAL 3169



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLG      V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PTAL-PGLDSKHIVGIACG 770



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4004 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4119

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 4168


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 3049 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3108

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3109 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3165

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3166 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3225

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3226 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3274

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3275 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3333

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3334 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 4031 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4081

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4082 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4141

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4142 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4198

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4199 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4249

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4309

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4310 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4365

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4366 LQGKKVNRVACGSAHTLAWSTSKPASAG 4393



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3084 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3143

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3144 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3203

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3204 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3260

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3261 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3309

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3310 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3369

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3370 VQG-LEGQKITRVACGSSHSVAWTT 3393



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 503 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 552

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 553 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 606

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 607 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 666

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 667 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 715

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 716 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 774

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 775 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVG 834

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 835 IACGPAQSFA-----------WSSCSEWSIGLRVPF 859



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 493 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 547

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 548 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 593

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 594 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 642

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 643 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 702

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 703 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 762

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 763 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 809



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 3027 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 3083

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3084 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3132

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3133 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3192

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3193 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3250

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3251 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3287



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 4019 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4075

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4076 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4126

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4186

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4187 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4246

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4247 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4280



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4193 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4244

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4245 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4298

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4299 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4356

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4357 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4387



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 659 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 718

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 719 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 770

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 771 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGL 827

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 828 DSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 864



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 695 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 744

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 745 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 804

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 805 NDQCQHFDTLRVTKPE--PTAL-PGLDSKHIVGIACG 838



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2972 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 3029

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 3030 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3078

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3079 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3138

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3139 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3198

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3199 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3235



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 4019 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4069

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4070 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4127

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4128 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4185

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4186 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 4234


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 163/310 (52%), Gaps = 13/310 (4%)

Query: 277 VTKEG-EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +++EG EV+ WG+G  G+LGH        P+LV    G NV+ VSCG   T  L ++GE+
Sbjct: 1   MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEV 60

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           +T+G  N G    G   + +   P  L   L G  V +VACG  HT  +  +GQL+T+G 
Sbjct: 61  FTFGRGNFGQLGQGASVTANVSTP-ALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G +G LGHG+    + PK VESL+G +V  VA G +H++ I++           GG L T
Sbjct: 120 GEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE-----------GGNLLT 168

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG    G+LGH D   +  P  V  +      + +CG   T+ LT   +V+T GS   G+
Sbjct: 169 WGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGK 228

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG    +  +  ++   L+   V  IS+G +H A LTS G +YTWG    GQLG GD   
Sbjct: 229 LGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENS 288

Query: 576 RETPTFVEAL 585
           +  P  VE +
Sbjct: 289 QNIPVVVEVI 298



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 164/316 (51%), Gaps = 34/316 (10%)

Query: 220 DVMIWGEGVLG----GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           +V  WG+GVLG    GD            KTQ     P+L+ + +  +V+ +S G +H A
Sbjct: 7   EVYSWGQGVLGQLGHGD-----------EKTQRQ---PRLVVAFLGFNVRQVSCGNQHTA 52

Query: 276 LVTKEGEVFCWGEGKDGRLGH--KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           ++ + GEVF +G G  G+LG    V  +VS P LV  L G +V+ V+CG   TCAL  +G
Sbjct: 53  ILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNG 112

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++YTWG   +G    G+   ++     KL ++L G  V+ VA G +H++++   G L T+
Sbjct: 113 QLYTWGSGEYGRLGHGDEVRQA---SPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTW 169

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G G FG LGHG+  +   PK V+ ++      VACG  HT     +M+ + +      ++
Sbjct: 170 GGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHT-----LMLTQSQ------EV 218

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +TWG  + G+LG  D E+   P  +T L     +  S G   +  LT  G +YT G    
Sbjct: 219 WTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDK 278

Query: 514 GQLGNPKAKDRSITVV 529
           GQLG+     ++I VV
Sbjct: 279 GQLGHGDENSQNIPVV 294



 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 137/272 (50%), Gaps = 16/272 (5%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+Y+WG    G    G+ +++    PR +   L G  V +V+CG  HTAI+  +G++FT+
Sbjct: 7   EVYSWGQGVLGQLGHGDEKTQRQ--PRLVVAFL-GFNVRQVSCGNQHTAILMENGEVFTF 63

Query: 394 GDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           G G FG LG G     NVS P  V +L+G  VK VACG  HT A++D            G
Sbjct: 64  GRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALID-----------NG 112

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +L+TWG  + GRLGH D  R+  P  V  L   +    + G   +  +   G + T G  
Sbjct: 113 QLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGG 172

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG+    DR    +   +++     ++ G++H  +LT    V+TWG    G+LG+G
Sbjct: 173 YFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIG 232

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           D ++   P  + AL+   V  +  G   +AA+
Sbjct: 233 DEEKHAEPIMITALQGVGVIHISTGGFHSAAL 264



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 14/226 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+ +     V+ ++ G  H   +   G+++ WG G+ GRLGH   +  + PKLVE L 
Sbjct: 84  PALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQ 143

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           G  V  V+ G F +  + + G + TWG    G    G+   R      K+   +      
Sbjct: 144 GKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRK---TPKMVKGVQQCIAH 200

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +VACG  HT +++ S +++T+G G FG LG G+ +  ++P  + +L+G+ V  ++ G +H
Sbjct: 201 EVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFH 260

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
           +AA+              G L+TWG  DKG+LGH D   + +P  V
Sbjct: 261 SAALTSE-----------GVLYTWGGGDKGQLGHGDENSQNIPVVV 295



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 5/167 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+ES    +V  ++ G  H++++ + G +  WG G  G+LGH    D   PK+V+ + 
Sbjct: 136 PKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQ 195

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
                 V+CG   T  LT+S E++TWG    G   +G+    +  +   +   L GV V 
Sbjct: 196 QCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPI---MITALQGVGVI 252

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVES 417
            ++ G +H+A +++ G L+T+G G  G LGHG  N QN+    EV S
Sbjct: 253 HISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVEVIS 299


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
           +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 575 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 634

Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 635 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 691

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 692 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 751

Query: 429 GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 752 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 800

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
            Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 801 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 859

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 860 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 916



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 1556 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 1606

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 1607 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 1666

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 1667 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 1723

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 1724 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 1774

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1834

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 1835 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 1890

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 1891 LQGKKVNRVACGSAHTLAWSTSKPASAG 1918



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
           G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 610 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 670 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 729

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
            ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 730 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 786

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
           + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 787 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 835

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 836 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 895

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
           V+G L+ + +  ++ GS H    T+
Sbjct: 896 VQG-LEGQKITRVACGSSHSVAWTT 919



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 547 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 603

Query: 388 GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
           G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 656

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 657 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 712

Query: 505 VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 713 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 770

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 771 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 813



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 1544 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 1600

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 1601 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 1651

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1711

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 1712 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1771

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 1772 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1805



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 21/214 (9%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDI 233
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  V  WG+G  G   
Sbjct: 1718 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 1771

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
             G  DG            +P  ++S   L V  +  G++ +  +TK G V+ WG+G   R
Sbjct: 1772 RGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 1821

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  +
Sbjct: 1822 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTT 1879

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             +   PR L   L G +V++VACG  HT   STS
Sbjct: 1880 NAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 1912



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343 HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
           HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 498 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 555

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 556 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 604

Query: 452 KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
           K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 605 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 664

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 665 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 724

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 725 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 761



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 1544 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 1594

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 1595 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 1652

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 1653 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 1710

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL
Sbjct: 1711 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 1753


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 193/377 (51%), Gaps = 20/377 (5%)

Query: 266  NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GE 323
            +I+ G+K   +V+++G+++  GEG +GRLG   N +V  PK V  LS   V+ V+   G 
Sbjct: 3278 HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGG 3337

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
                ALT  G++++WG    G    G R +       KL +TL   R+  +ACG  H+A 
Sbjct: 3338 KHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK---PKLIETLRTKRIRDIACGSSHSAA 3394

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            +++SG+L+T+G G +G LGHG+     +PK V +L   +V  VACG      +       
Sbjct: 3395 ITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTL------- 3447

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
            C +    G +F+WGD D G+LG    E   +P  V RL     +Q  CG   ++ LT  G
Sbjct: 3448 CLTEE--GLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSG 3505

Query: 504  KVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            +V+T G   + +LG+   +  R  T ++G L+ + V  ++ G+ H   +T  G VY WG 
Sbjct: 3506 EVWTWGKGDYYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWGD 3564

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRM 622
            N +GQ G G++   + P+ V  L    V  V CGSS + A  L ++ +  D+       +
Sbjct: 3565 NDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSLPQNQTEKDKKE----PV 3620

Query: 623  PFGFRRKKHNCYNCGLH 639
            PF   +     ++ G++
Sbjct: 3621 PFAVAKDPLGSHSLGIY 3637



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 208/429 (48%), Gaps = 45/429 (10%)

Query: 197  NESHRLVTPTYGSPLIERKDILKD--VMIWGEG--VLG------GDIGGAVDGSVSQNKT 246
            +E H   TP Y S L++  +   +     WG    + G      G +GG +DGS  +  T
Sbjct: 4344 HEDHSYFTPQYDSQLLQWFNRRPEDWAFSWGGASTIFGWGHNHRGQLGG-LDGSRIKMPT 4402

Query: 247  QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
              +AL       +++  +Q I+ G +    VT +G+++  G G  GRLG      V+ P 
Sbjct: 4403 PCEAL-------SLLRPIQ-IAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDSVTTPT 4454

Query: 307  LVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
            LVE L  + ++  +V+ G     AL+  GE+++WG    G    G R S       KL +
Sbjct: 4455 LVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDR---PKLIE 4511

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
             L G+ V  +ACG  H+A +++ G + T+G G +G LGHG+ ++  QPK VE+L G +  
Sbjct: 4512 ALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4571

Query: 425  SVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
             +ACG     T  I D              +++WGD D G+LG    +   +P  +  L 
Sbjct: 4572 DIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLA 4620

Query: 483  DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFV 538
                 +  CG   +V LT  G VYT G   + +LG+       + + +  ++GK     +
Sbjct: 4621 GLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK----I 4676

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
              I++GS H    + GG V+TWG N  GQLG G     + P  V++L+ + +  V+CGS+
Sbjct: 4677 ISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSA 4736

Query: 599  ITAAICLHK 607
             T A+  ++
Sbjct: 4737 HTLALSTYQ 4745



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 152/320 (47%), Gaps = 18/320 (5%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +V  WG     +LG      V  P     LS +    ++ G      +++ G++Y  G  
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEG 3301

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
             +G   +G   +     P+++   L    V KVA   G  H   ++  G++F++G+G  G
Sbjct: 3302 TNGRLGLGHNNNVP--TPKQV-PILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3358

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHGN   + +PK +E+LR  +++ +ACG  H+AAI              G+L+TWG  
Sbjct: 3359 KLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITS-----------SGELYTWGLG 3407

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLG 517
            + GRLGH D   +L P  VT L D   VQ +CG     T+ LT  G V++ G    G+LG
Sbjct: 3408 EYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3467

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               ++  SI     +L    V  I  G+     LT  G V+TWGK    +LG G  Q   
Sbjct: 3468 RGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3527

Query: 578  TPTFVEALRDRQVESVVCGS 597
             PT ++ LR ++V  V  G+
Sbjct: 3528 KPTPIQGLRGKKVIHVAVGA 3547



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 36/325 (11%)

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T    V C+  G   R              +E  +G+ V+ V+C E     LT +G++ +
Sbjct: 555 TAANNVACFAHGSTSRYSTAT---------IELPAGVQVRQVACSETSIYILTTTGQVLS 605

Query: 338 WGHNN-HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA--CGEWHTAIVSTSGQLFTYG 394
             H+N H  D              K  + L+ V + ++A  C   H   ++ +G +F++G
Sbjct: 606 LQHSNCHTPDTTAP----------KPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWG 655

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +G  G LGHG+  +   P  + +L   +V  V CG  ++AAI              G+L+
Sbjct: 656 NGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAIT-----------AAGELY 704

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS--CGRMLTVGLTGLGKVYTMGSAV 512
           TWG    GRLGH + E K LPT V  L     +  +  CG   ++ +T  G VY  G   
Sbjct: 705 TWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGD 764

Query: 513 HGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            G+LGN      S+ V +E     +    + SGS+    L   G+VY+WGK   G+LG G
Sbjct: 765 FGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHG 824

Query: 572 DSQERETPTFVEALRDRQVESVVCG 596
            S+   +P  ++AL  + +  +  G
Sbjct: 825 HSEHTASPKAIQALEGKNIVDLAVG 849



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 27/277 (9%)

Query: 301 DVSCPKLVECLSGINVQSVS--CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           D + PK +E L  +N+  ++  C      ALT +G++++WG+   G   +G   + S  +
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGR--LGHGDTSSKDI 672

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           P ++   L   +V+ V CG  ++A ++ +G+L+T+G GT+G LGHGN ++   P  V+ L
Sbjct: 673 PTRIV-ALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVL 731

Query: 419 RGLKVKSVA--CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           +  +V  VA  CG  H+  + D            G ++ WGD D G+LG+       +P 
Sbjct: 732 KQQRVIHVALGCGDAHSLCVTDT-----------GIVYAWGDGDFGKLGNGTCNGSSVPV 780

Query: 477 CVTRLVDFD-FVQASCGRMLTVGLTGLGKVYT----MGSAVHGQLGNPKAKDRSITVVEG 531
            +      D  V+   G   +V L   G VY+     G  +        A  ++I  +EG
Sbjct: 781 AIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEG 840

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           K   +   G++    H   LT+ G +Y WG+N   QL
Sbjct: 841 KNIVDLAVGLA----HCLALTASGELYGWGRNDFQQL 873



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 15/192 (7%)

Query: 251  LLPKLLESAVMLDVQNISLGAKHAALV--TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
            L PKL+ +     V  ++ G++ A  +  T+EG VF WG+G  G+LG   +   S P  V
Sbjct: 3421 LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQV 3480

Query: 309  ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLF 363
            E L+G+ V  + CG   + ALTKSGE++TWG  +     HG D         H       
Sbjct: 3481 ERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTD--------QHVRKPTPI 3532

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
              L G +V  VA G  H   V+ SGQ++ +GD   G  G GN     +P  V  L G+ V
Sbjct: 3533 QGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFV 3592

Query: 424  KSVACGPWHTAA 435
              VACG  H+ A
Sbjct: 3593 NRVACGSSHSVA 3604



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 123/277 (44%), Gaps = 21/277 (7%)

Query: 249 DALLPKLLESAVMLDVQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D   PK +E    +++  ++     +H   +T  G+VF WG G+ GRLGH        P 
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT 674

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
            +  L+   V  V CG   + A+T +GE+YTWG   +G   +G   S    LP  +   L
Sbjct: 675 RIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGR--LGHGNSEDKHLP-TIVQVL 731

Query: 367 DGVRVSKVA--CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
              RV  VA  CG+ H+  V+ +G ++ +GDG FG LG+G     S P  +E        
Sbjct: 732 KQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIEL------- 784

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
                P  +   V +      S A+G  G +++WG    GRLGH   E    P  +  L 
Sbjct: 785 -----PQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALE 839

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             + V  + G    + LT  G++Y  G     QL  P
Sbjct: 840 GKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP 876



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 14/277 (5%)

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            I+ WGHN+ G  L G   SR   +P    + L  +R  ++A GE     V+  G+L+  G
Sbjct: 4379 IFGWGHNHRG-QLGGLDGSRIK-MPTPC-EALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4435

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
             G  G LG G   +V+ P  VESL+ + +K VA         V+     C + +  G++F
Sbjct: 4436 YGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVA---------VNSGGKHCLALSSDGEVF 4486

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
            +WG+ + G+LGH + +    P  +  L     +  +CG   +  +T  G V T G   +G
Sbjct: 4487 SWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYG 4546

Query: 515  QLGNPKAKDR-SITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            +LG+  ++D+    +VE  L    +     SG      +T   +V++WG    G+LG G 
Sbjct: 4547 RLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4606

Query: 573  SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            S   + P  +E+L    V  V CGS  + A+    S+
Sbjct: 4607 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSV 4643



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 475 PTCVTRLVDFDFVQ--ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
           P  +  L   + VQ  A C     + LT  G V++ G+   G+LG+     + I      
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVA 678

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L E  V G+  GS + A +T+ G +YTWG+   G+LG G+S+++  PT V+ L+ ++V  
Sbjct: 679 LAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIH 738

Query: 593 VVCGSSITAAICL 605
           V  G     ++C+
Sbjct: 739 VALGCGDAHSLCV 751


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 182/357 (50%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ V  
Sbjct: 3243 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTA 3302

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3303 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 3359

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3360 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3419

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3420 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3468

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3469 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3527

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V  L  +++  V CGSS + A
Sbjct: 3528 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 4222 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4272

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4273 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4332

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V+ VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4333 GNRSPCDR--PR-VIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4389

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4390 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4440

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4500

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4501 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4556

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4557 LQGKKVNRVACGSAHTLAWSTSKPASAG 4584



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 161/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3278 GEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3337

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3338 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3397

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3398 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3454

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3455 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3503

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3504 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3563

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V G L+ + +  ++ GS H    T+
Sbjct: 3564 VHG-LEGQKITRVACGSSHSVAWTT 3587



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245  KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
            K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 695  KYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 744

Query: 305  PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP--- 359
            P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 745  PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 798

Query: 360  RKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
             K+  T  G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 799  PKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 858

Query: 416  ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
              L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 859  AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 907

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
             P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 908  TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 966

Query: 533  LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 967  LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVG 1026

Query: 593  VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
            + CG + + A            SSCS+     R+PF
Sbjct: 1027 IACGPAQSFA-----------WSSCSEWSIGLRVPF 1051



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 3215 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3271

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P++V +L    VK VA   G  H  A+        
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT------- 3324

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3325 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3380

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3381 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3438

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3439 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3481



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 157/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 4210 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4266

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4267 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4326

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     + D+      S  +   G L+TWG    GRLGH D
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4386

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4387 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4446

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4447 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4506

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4507 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4564

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4565 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4600



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 4384 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4435

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4436 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4489

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4490 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4547

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4548 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4578



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249  DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
            D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 851  DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 910

Query: 307  LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
            L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 911  LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 962

Query: 362  LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 963  LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGL 1019

Query: 422  KVK---SVACGP-----------WHTAAIVDIMVDRC 444
              K    +ACGP           W     V  +VD C
Sbjct: 1020 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 1056



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 887  VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 936

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 937  GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 996

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            N+        R ++    P  L   LD   +  +ACG
Sbjct: 997  NDQCQHFDTLRVTKPE--PTAL-PGLDTKHIVGIACG 1030



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 95/220 (43%), Gaps = 14/220 (6%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E+L  L V  VA G     A+            
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3269

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
            + GK++  G+A  GRLG  +      +P  VT L  +    V    G      LT  GKV
Sbjct: 3270 VEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 3329

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    
Sbjct: 3330 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3389

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3390 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3429


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2926 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 2985

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2986 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3042

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3043 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3102

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3103 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3151

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3152 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3210

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3211 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267



 Score =  162 bits (411), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3908 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3958

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3959 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4018

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4019 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4075

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4076 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4126

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4186

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4187 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4242

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4243 LQGKKVNRVACGSAHTLAWSTSKPASAG 4270



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2961 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3020

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3021 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3080

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3081 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3137

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3138 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3186

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3187 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3246

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3247 VQG-LEGQKITRVACGSSHSVAWTT 3270



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 380 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 429

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 483

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 592

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 593 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 651

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 652 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVG 711

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 712 IACGPAQSFA-----------WSSCSEWSIGLRVPF 736



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 424

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 425 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 470

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 471 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 519

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 580 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 640 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 686



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2904 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 2960

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 2961 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3009

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3069

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3070 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3127

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3128 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3164



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3896 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3952

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4003

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4123

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4124 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4070 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4121

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4122 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4175

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4176 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4233

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4234 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4264



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 536 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 595

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 596 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 647

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 648 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGL 704

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 705 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 741



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 572 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 621

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 681

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 682 NDQCQHFDTLRVTKPE--PTAL-PGLDTKHIVGIACG 715



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2849 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 2906

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2907 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2955

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2956 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3015

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3016 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3075

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3076 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3112



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3946

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3947 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4004

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4005 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4062

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 171/340 (50%), Gaps = 21/340 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTC 327
            G+K + +V+ +G+VF  GEG  GRLG     ++  P  +  LS   V+  +VSC      
Sbjct: 2966 GSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVL 3025

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A+T  G++++WG   +G   +G    +S+  P K+ +      + +V+CG  H+A VS +
Sbjct: 3026 AVTADGKVFSWGDGQYGQ--LGHGSLQSYDRP-KMIEIFQAKHIREVSCGTGHSAAVSVN 3082

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCK 445
            G+LFT+G G  G LGHG+  N ++PK V +L  +++  VACG    HT A  D       
Sbjct: 3083 GELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD------- 3135

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                   L+ WGD   G+LG  DG     +P  V      + +Q  CG   +V LT  GK
Sbjct: 3136 -----NSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECGMHFSVLLTKEGK 3189

Query: 505  VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
            VYT G   + +LGN     + I  +   L  + +  ++ G+ H   LTS G VY+WG N 
Sbjct: 3190 VYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNE 3249

Query: 565  NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            +GQ G   +     P  V +L+  ++  + CGSS + A  
Sbjct: 3250 HGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFA 3289



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 172/355 (48%), Gaps = 17/355 (4%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+L ES   L+   I+ G +    VT +G+V+  G    GRLG   + +V+ P  +  L+
Sbjct: 3858 PRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLA 3917

Query: 313  --GINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
              GI V+ ++   G     A+T  GE+Y WG    G   +G   + +  +P  L ++L  
Sbjct: 3918 TRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMN--VPH-LIESLKS 3974

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
              V    CG  H+A ++  G L+T+G G +G LGH + +   +PK V +L+G +V  VAC
Sbjct: 3975 KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVAC 4034

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G      +       C + +  G +F+WGD D G+LG    E   +P  +  L     ++
Sbjct: 4035 GSGDAQTL-------CATAS--GCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIK 4085

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
              CG   ++ LT  G VYT G   + +LG+   +  R+   V G L  E V  I  GS H
Sbjct: 4086 LLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLH 4145

Query: 548  VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
              V T  G V++WG N  GQ+G   +Q    P  +    +  ++ V CGS+ + A
Sbjct: 4146 CIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIA 4200



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 146/278 (52%), Gaps = 22/278 (7%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALTK G++Y+WG  ++G   +G   S++   P  +   L G R+  ++ G  H+A V+  
Sbjct: 522 ALTKDGKVYSWGQGSNGVLGIGNTESQT--APTAV-AALSGDRIVHISAGSMHSAAVTED 578

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCK 445
           G L+T+G G++G LGHGN ++   P  VE L G+K+  V CG    HT A+ D       
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDT------ 632

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGK 504
                G++++WGD D G+LG    ++  +P  ++ +      V+  CG  +++ LT  GK
Sbjct: 633 -----GQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGK 687

Query: 505 VYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +Y+ G     QLG+   +  R   ++EG L E  V  +S G+ H   LT+   VY WGKN
Sbjct: 688 LYSWGCGDTYQLGHGNQEHVRQPKLIEG-LSETVVSDVSVGAQHCVALTTDSDVYAWGKN 746

Query: 564 ANGQLG-LGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           ++ ++   GD     +P  +EA   +    + CG+S T
Sbjct: 747 SSFEVNESGDI--ISSPLMIEAASGKGALLIACGASET 782



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 147/308 (47%), Gaps = 21/308 (6%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P  + S  M  V+ +++    +H   VT +G+VF WG+G+ G+LGH        PK++E
Sbjct: 3000 MPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIE 3059

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
                 +++ VSCG   + A++ +GE++TWG    G   +G   S +   P KL   L+ V
Sbjct: 3060 IFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGR--LGHGDSNNQTKP-KLVRALEKV 3116

Query: 370  RVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSV 426
            R+S VACG    HT + +    L+ +GDG+FG LG  +  + +  P +V +     +  +
Sbjct: 3117 RISCVACGSRNAHT-LAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPS-NIIQI 3174

Query: 427  ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
             CG  H + ++             GK++TWG  +  RLG+     + +PT V  L     
Sbjct: 3175 ECG-MHFSVLL----------TKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTI 3223

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
             Q + G +  + LT  G+VY+ G   HGQ GN          +   LK   +  I+ GS 
Sbjct: 3224 TQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSS 3283

Query: 547  HVAVLTSG 554
            H      G
Sbjct: 3284 HSIAFAQG 3291



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 129/250 (51%), Gaps = 27/250 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            ++  WGEG          DG +    T V+  +P L+ES     V +   G+ H+A +T 
Sbjct: 3943 ELYAWGEGE---------DGKLGLGTT-VNMNVPHLIESLKSKHVIDAGCGSSHSACITD 3992

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
            +G ++ WG+G+ GRLGH  +     PKLV  L G  V  V+C  G+ QT   T SG +++
Sbjct: 3993 DGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFS 4052

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  ++G   +G   +    +P+K+ D+L G  V K+ CG   +  ++T+G ++T+G G 
Sbjct: 4053 WGDGDYGK--LGRGGNEGSKVPKKI-DSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGD 4109

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            +  LGHG+  +   P+ V  L   + V  + CG  H           C      GK+F+W
Sbjct: 4110 YYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLH-----------CIVCTESGKVFSW 4158

Query: 457  GDADKGRLGH 466
            GD D+G++G+
Sbjct: 4159 GDNDEGQIGN 4168



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 14/227 (6%)

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           H   ++  G+++++G G+ GVLG GN ++ + P  V +L G ++  ++ G  H+AA+ + 
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE- 577

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTV 497
                      G L+TWG    GRLGH + E KL+PT V  L     VQ  CG     T+
Sbjct: 578 ----------DGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTL 627

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            L   G+V++ G   +G+LG P +    +   + G      V  I  G+     LT  G 
Sbjct: 628 ALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGK 687

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +Y+WG     QLG G+ +    P  +E L +  V  V  G+    A+
Sbjct: 688 LYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 4/175 (2%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           + +IS G+ H+A VT++G ++ WG+G  GRLGH    D   P +VE L+G+ +  V C  
Sbjct: 562 IVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGS 621

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  T AL  +G++++WG  ++G   +G   S  + +P+ +        V K+ CG   +
Sbjct: 622 GDAHTLALDDTGQVWSWGDGDYGK--LGRPGSDQNKVPKPISGIGSTSPVVKIICGNQIS 679

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
             ++  G+L+++G G    LGHGN ++V QPK +E L    V  V+ G  H  A+
Sbjct: 680 MALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 21/242 (8%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H   +TK+G+V+ WG+G +G LG       + P  V  LSG  +  +S G   + A+T+ 
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQL 390
           G +YTWG  ++G   +G   +    +P  + + L+GV++ +V C  G+ HT  +  +GQ+
Sbjct: 579 GVLYTWGKGSYGR--LGHGNAEDKLIP-TIVEGLNGVKIVQVDCGSGDAHTLALDDTGQV 635

Query: 391 FTYGDGTFGVLGH-GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           +++GDG +G LG  G+ QN             KV     G   T+ +V I+     S A+
Sbjct: 636 WSWGDGDYGKLGRPGSDQN-------------KVPKPISGIGSTSPVVKIICGNQISMAL 682

Query: 450 --GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              GKL++WG  D  +LGH + E    P  +  L +      S G    V LT    VY 
Sbjct: 683 TKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYA 742

Query: 508 MG 509
            G
Sbjct: 743 WG 744



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 24/274 (8%)

Query: 330  TKSGEIYTWGHNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            T   +++ WG N+    G DL  E + +S    R    TL  +   + A G   + +VS 
Sbjct: 2921 THGNKVFVWGLNDMRQLGTDL-SEAKVKSPIESR----TLARLHPIQFAGGSKCSFVVSD 2975

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA--CGPWHTAAIVDIMVDRC 444
             G++F  G+G+ G LG G   N+  P ++ SL    V+ VA  C   H  A+        
Sbjct: 2976 DGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAV-------- 3027

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                  GK+F+WGD   G+LGH   +    P  +         + SCG   +  ++  G+
Sbjct: 3028 ---TADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGE 3084

Query: 505  VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG-GSVYTWGKN 563
            ++T G    G+LG+  + +++   +   L++  +  ++ GS +   L +G  S++ WG  
Sbjct: 3085 LFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDG 3144

Query: 564  ANGQLGLGD-SQERETPTFVEALRDRQVESVVCG 596
            + G+LGL D S   + P  V       ++ + CG
Sbjct: 3145 SFGKLGLKDGSSSTDVPVQVITFPSNIIQ-IECG 3177



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 92/219 (42%), Gaps = 15/219 (6%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            +F +G    G LG      V  P+  ESL  L    +  G     A+ D           
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTD----------- 3884

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL----VDFDFVQASCGRMLTVGLTGLGKV 505
             GK++  G A  GRLG    +    PT +T L    +    +    G    + +T  G++
Sbjct: 3885 DGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGEL 3944

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            Y  G    G+LG     + ++  +   LK + V     GS H A +T  GS+YTWGK   
Sbjct: 3945 YAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRY 4004

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            G+LG  D + +  P  V AL+  QV  V CGS     +C
Sbjct: 4005 GRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLC 4043



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + LT  GKVY+ G   +G LG    + ++       L  + +  IS+GS H A +T  G 
Sbjct: 521 LALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGV 580

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +YTWGK + G+LG G+++++  PT VE L   ++  V CGS     + L
Sbjct: 581 LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLAL 629



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 441  VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGL 499
            +D   ++  G K+F WG  D  +LG    E K+     +R L     +Q + G   +  +
Sbjct: 2914 LDLLSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVV 2973

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSV 557
            +  GKV+  G    G+LG     +  +      L    V+   +S    HV  +T+ G V
Sbjct: 2974 SDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKV 3033

Query: 558  YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV------ 611
            ++WG    GQLG G  Q  + P  +E  + + +  V CG+  +AA+ ++  +        
Sbjct: 3034 FSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGAD 3093

Query: 612  -----GDQSSCSQCRMPFGFRRKKHNCYNCG 637
                 GD ++ ++ ++     + + +C  CG
Sbjct: 3094 GRLGHGDSNNQTKPKLVRALEKVRISCVACG 3124



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 42/79 (53%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I  G + +  +TK+G+++ WG G   +LGH     V  PKL+E LS   V  VS G 
Sbjct: 669 VVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGA 728

Query: 324 FQTCALTKSGEIYTWGHNN 342
               ALT   ++Y WG N+
Sbjct: 729 QHCVALTTDSDVYAWGKNS 747


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3965 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4015

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4076 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4133 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4183

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4244 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4300 LQGKKVNRVACGSAHTLAWSTSKPASAG 4327



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 42/394 (10%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 435 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVG 766

Query: 593 VVCG--SSITAAICLHKSISVGDQSSCSQCRMPF 624
           + CG   S   + C   SI +        C M F
Sbjct: 767 IACGPAQSFAWSSCXEWSIGLRVPFVVDICSMTF 800



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2961 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 3017

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3066

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3127 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3184

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3185 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3953 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4009

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4060

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4127 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4178

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4179 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4232

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4233 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4290

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4291 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PTAL-PGLDTKHIVGIACG 770



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTAGLESTATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4004 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4119

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 4168


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ V  
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTA 2745

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2802

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2803 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2862

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2863 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 2911

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2912 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2970

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2971 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2721 GEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2780

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 2781 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2840

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 2841 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 2897

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 2898 NVPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 2946

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 2947 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTL 3006

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3007 VQG-LEGQKITRVACGSSHSVAWTT 3030



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 166/380 (43%), Gaps = 62/380 (16%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G ++ WG    G+LG      V  P   E L+ +    +  GE    A+T  G++Y  G+
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3690

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
               G   VG   S S      L +++  V + KVA   G  H   +S+ G+++++G+   
Sbjct: 3691 GAGGRLGVGGTESVSA---PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3747

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN     +P+ VESLRG +V  +A G  H+A         C ++A  G L+TWG 
Sbjct: 3748 GKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSA---------CVTSA--GDLYTWGK 3796

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +L P  V  L     V  +CG     T+ LT    V++ G   +G+L
Sbjct: 3797 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKL 3856

Query: 517  GN--------PKAKDRSITV--------------VEGK---------------------- 532
            G         P     S+ V              V GK                      
Sbjct: 3857 GRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQG 3916

Query: 533  LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            L+ + V  I++GS H    T  G VYTWG N  GQLG G +   + P  V AL+ R+V  
Sbjct: 3917 LQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNR 3976

Query: 593  VVCGSSITAAICLHKSISVG 612
            V CGS+ T A    K  S G
Sbjct: 3977 VACGSAHTLAWSTSKPASAG 3996



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 170/378 (44%), Gaps = 53/378 (14%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L V  I+   K   ++++ G V+              N D   P+LV+ L+  N+  ++ 
Sbjct: 452 LGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLASRNIVKIAA 501

Query: 322 GE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP---RKLFDTLDGVRVSK--- 373
                   AL  +GE+Y+WG  + G      R      +P    K+     G +  K   
Sbjct: 502 HSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEEPKVISAFSGKQAGKHVV 555

Query: 374 -VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP-- 430
            +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  VACG   
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 615

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
               A+ D            G++++WGD D G+LG    +    P  + +L D D V+  
Sbjct: 616 AQPLAVTD-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVR 664

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
           CG   +V LT  G+VY+ G   + +LG+   +      +   L+ + V  +++GS H   
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLA 724

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
           LT    V++WG N   Q      Q +  P+ +  L  + +  + CG + + A        
Sbjct: 725 LTEDSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA-------- 776

Query: 611 VGDQSSCSQ----CRMPF 624
               SSCS+     R+PF
Sbjct: 777 ---WSSCSEWSVGLRVPF 791



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 66/295 (22%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P LLES   + ++ +++  G KH   ++ EGEV+ WGE +DG+LGH        P++VE 
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 3766

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            L G  V  ++ G   +  +T +G++YTWG   +G   +G   S     P KL + L G R
Sbjct: 3767 LRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHR 3823

Query: 371  VSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV---------------------------- 400
            V  VAC  G+  T  ++    ++++GDG +G                             
Sbjct: 3824 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPP 3883

Query: 401  ----------------LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
                            LGHG+  +V +P++V+ L+G KV ++A G  H           C
Sbjct: 3884 PSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH-----------C 3932

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTV 497
                  G+++TWGD D+G+LG  DG    +  P  V  L      + +CG   T+
Sbjct: 3933 VCCTEEGEVYTWGDNDEGQLG--DGTTNAIQRPRLVAALQGRKVNRVACGSAHTL 3985



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 20/247 (8%)

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLK 422
            +TL  + V +VA G      V+  G+++  G+ T G LG G +   V  P++V +L    
Sbjct: 2691 ETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYV 2750

Query: 423  VKSVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            VK VA   G  H  A+            + GK+F+WG+ D G+LGH        P  +  
Sbjct: 2751 VKKVAVHSGGRHATALT-----------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2799

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  LT  G++YT G   +G+LG+     + K + + V+ G    +
Sbjct: 2800 LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 2859

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G V++WG    G+LG G S+    P  +E L  + V  + CG
Sbjct: 2860 VACG--SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECG 2917

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 2918 AQFSLAL 2924



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 17/159 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG+
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736

Query: 341 NN--HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+     D + + +     LP      LD   +  +ACG
Sbjct: 737 NDQCQHFDTLHQTKPEPSLLP-----GLDTKHIVGIACG 770



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 14/259 (5%)

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            T +   SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVT 3680

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
              G+L+  G G  G LG G  ++VS P  +ES++ + ++ VA         V+     C 
Sbjct: 3681 ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVA---------VNSGGKHCL 3731

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            + +  G++++WG+A+ G+LGH +      P  V  L   + V  + G   +  +T  G +
Sbjct: 3732 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDL 3791

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKN 563
            YT G   +G+LG+  ++D+    +   L+   V  ++  SG      LT   +V++WG  
Sbjct: 3792 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 3851

Query: 564  ANGQLGLGDSQERETPTFV 582
              G+LG G S   + P  V
Sbjct: 3852 DYGKLGRGGSDGCKVPMKV 3870



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3630 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3680

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3681 --ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 3738

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   VVE     E V  I++G  H A +TS G +YTWGK
Sbjct: 3739 VYSWGEAEDGKLGHGNRSPCDRP-RVVESLRGTEVVD-IAAGGAHSACVTSAGDLYTWGK 3796

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  V CGS     +CL    +V
Sbjct: 3797 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTV 3845



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 14/200 (7%)

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HV 467
            +  P   E+L  L V  VA G     A+            + GK++  G+A  GRLG  +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEGKVYACGEATNGRLGLGM 2732

Query: 468  DGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
                  +P  VT L  +    V    G      LT  GKV++ G    G+LG+    +  
Sbjct: 2733 SSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 2792

Query: 526  ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
               +   LK + ++ I+ GS H A LTS G +YTWG    G+LG GD+  +  P  V+ L
Sbjct: 2793 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 2852

Query: 586  RDRQVESVVCGSSITAAICL 605
               +V  V CGS     + L
Sbjct: 2853 LGHRVIQVACGSRDAQTLAL 2872


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2620 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 2679

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2680 LSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 2736

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2737 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2796

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2797 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 2845

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 2846 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2904

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2905 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 195/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3601 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3651

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3652 GGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3711

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G   SRS     ++ ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3712 G---SRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3768

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 3769 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3819

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +PT +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3879

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3880 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3935

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 3936 LQGKKVNRVACGSAHTLAWSTSKPTSAG 3963



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 18/299 (6%)

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S+ M+    +  G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++
Sbjct: 2681 SSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 2740

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
             ++CG   + ALT SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG
Sbjct: 2741 DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACG 2797

Query: 378  --EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
              +  T  ++  G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A
Sbjct: 2798 SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLA 2857

Query: 436  IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
            +              G ++TWG  D  RLGH        P  V  L     V  + G + 
Sbjct: 2858 LTK-----------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALH 2906

Query: 496  TVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             + +T  G+VY  G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 2907 CLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2964



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 177/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 123 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYT----------QAYNSDTLA 172

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 173 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 226

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K      G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 227 PKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 286

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 287 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 335

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 336 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 394

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 395 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 454

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 455 IACGPAQSFA-----------WSSCSEWSIGLRVPF 479



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 41/358 (11%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            AA +    EV  WG      +G K   +V  P   E L+ + V  ++C E +   L++S
Sbjct: 104 QAAWIGSLQEVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRS 158

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQ 389
           G +YT  +N             S  L  +L   L    + K+A    G  + A+ +T G+
Sbjct: 159 GRVYTQAYN-------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GE 204

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCK 445
           ++++G G  G LGHG+   + +PK + +  G +    V  +ACG  ++AAI         
Sbjct: 205 VYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAIT-------- 256

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLG 503
                G+L+TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G
Sbjct: 257 ---AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 313

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +V++ G   +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK 
Sbjct: 314 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 373

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            N +LG G  +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 374 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 429



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3589 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3645

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 3646 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 3696

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH        P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3756

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 3757 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 3816

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + PT +++L    V  V CGS  + A+
Sbjct: 3817 RGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVAL 3850



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2598 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 2654

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 2655 GEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT-----------VD 2703

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G 
Sbjct: 2704 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 2763

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 2764 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 2821

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2822 KLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 2858



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 3779 QGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPTKID 3830

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 3831 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3890

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 3891 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 3947

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 3948 SAHTLAWSTS 3957



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 279 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 338

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 339 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 390

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 391 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 447

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 448 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 484



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 315 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 364

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 365 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 424

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 425 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 458



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G   TA + T  ++F
Sbjct: 2543 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGGSGSLIRKKAAGLESTATIRT--KVF 2600

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2601 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2649

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2650 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSW 2709

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 2710 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 2769

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 2770 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2806



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 21/231 (9%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3589 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3639

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3640 --ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3697

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            VY+ G A  G+LG+    P  + R I  + G      V  +++G  H A +T+ G +YTW
Sbjct: 3698 VYSWGEAEDGKLGHGSRSPCDRPRVIESLRGI----EVVDVAAGGAHSACVTAAGDLYTW 3753

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            GK   G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 3754 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTV 3804


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 203/400 (50%), Gaps = 33/400 (8%)

Query: 208  GSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNI 267
            GSP + R++I   V +WG  +   D  G + GS  +         PK  E    L   NI
Sbjct: 2642 GSPSM-RENIECKVFVWG--LNDKDQLGGLKGSKIKE--------PKFSEVISNLKPMNI 2690

Query: 268  SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQ 325
            + G+K   +V+ +G+VF  GEG +GRLG   + +V+ PK +  LS   ++ V+   G   
Sbjct: 2691 AGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRH 2750

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
              ALT  G +++WG    G   +G     S+  P KL ++L   R+  VACG  H+A V+
Sbjct: 2751 ALALTIDGRVFSWGEGEDGK--LGHGNKISYDRP-KLVESLKCKRIRDVACGSSHSAAVT 2807

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            +SG+L+T+G G +G LGHG+  NV Q  PK+V +L   +V  VACG      +   + +R
Sbjct: 2808 SSGELYTWGSGEYGRLGHGD--NVPQLKPKQVRALSHERVVQVACGSRDAQTLA--LTER 2863

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                     +++WGD D G+LG    +   LP  V  L     +Q  CG   ++ L+  G
Sbjct: 2864 -------HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNG 2916

Query: 504  KVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            KV+T G   + +LG+   +  R   VVE +L ++ V  +S G+ H   +T  G VY WG 
Sbjct: 2917 KVWTWGKGDYFRLGHGSDSHVRWPQVVE-ELADKNVIQVSVGALHCIAVTDRGEVYAWGD 2975

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            N +GQ G G++     P  V  L    + +V CGSS + A
Sbjct: 2976 NDHGQQGNGNTTVNRKPAIVRGL--EAITNVACGSSHSVA 3013



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 192/386 (49%), Gaps = 34/386 (8%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG V+G+  +  T  DAL         +  VQ +  G +    +T +G+V+  G G 
Sbjct: 3630 GQLGG-VEGAKVKTATICDAL-------TALRPVQIVG-GEQTLFALTSDGKVYATGYGA 3680

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNN-----H 343
             GRLG      VS P L+E L  + V   +V+ G     ALT SG++++WG  +     H
Sbjct: 3681 GGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH 3740

Query: 344  GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
            G+  + ER         KL ++L    V  VACG  H+A ++ SG+L+T+G G +G LGH
Sbjct: 3741 GSKALCERP--------KLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGH 3792

Query: 404  GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
            G+ ++  +PK+VE L G  V  VACG      +       C S    G +++WGD D G+
Sbjct: 3793 GDSEDQLKPKKVEELAGHNVLDVACGSGDAQTL-------CVSR--DGLVWSWGDGDYGK 3843

Query: 464  LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
            LG    +    P  +  L +   ++  CG   +V LT  G VYT G   + +LG+     
Sbjct: 3844 LGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDH 3903

Query: 524  -RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             R    V+G L+ + V  ++ GS H    T  G V+TWG N  GQLG G +   + P  V
Sbjct: 3904 VRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLV 3963

Query: 583  EALRDRQVESVVCGSSITAAICLHKS 608
             +L+ +++  V CGS+ T +    KS
Sbjct: 3964 ASLKGKKMNRVACGSAHTVSWSTSKS 3989



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 195/440 (44%), Gaps = 43/440 (9%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V   GEG   G +G     +V+Q K   D L P  ++         +  G +HA  +T +
Sbjct: 2706 VFACGEGT-NGRLGLGHSHNVAQPKPLTD-LSPYFIKKVA------VHSGGRHALALTID 2757

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G VF WGEG+DG+LGH   +    PKLVE L    ++ V+CG   + A+T SGE+YTWG 
Sbjct: 2758 GRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGS 2817

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTF 398
              +G   +G   +     P+++   L   RV +VACG  +  T  ++    ++++GDG F
Sbjct: 2818 GEYGR--LGHGDNVPQLKPKQV-RALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDF 2874

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LG G     S P+ VE+L   +V  V CG   + A+           +  GK++TWG 
Sbjct: 2875 GKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL-----------SKNGKVWTWGK 2923

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             D  RLGH        P  V  L D + +Q S G +  + +T  G+VY  G   HGQ GN
Sbjct: 2924 GDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGN 2983

Query: 519  PKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                 +R   +V G    E +  ++ GS H    +S G+                 Q+  
Sbjct: 2984 GNTTVNRKPAIVRGL---EAITNVACGSSHSVAWSSTGT---------------SPQKLH 3025

Query: 578  TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
             P     +RD   E+++C                GD+ S S+  +     + K +     
Sbjct: 3026 DPILFPVVRDPLGETLLCDDQPRQDKEESIPFVNGDRPSLSRVFLSLDSVQAKIDALFQA 3085

Query: 638  LHFCSACSTKKIINASLTPN 657
            +      + ++II  SL P+
Sbjct: 3086 IQALQILTAREIIMVSLMPH 3105



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 149/311 (47%), Gaps = 19/311 (6%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P L+E+   + V  +++  G KH   +T  G+VF WGEG DG+LGH        PKL+E 
Sbjct: 3695 PTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES 3754

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            L   +V SV+CG   +  +T SGE+YTWG   +G   +G   S     P+K+ + L G  
Sbjct: 3755 LRDKHVVSVACGGAHSACITASGELYTWGKGRYGR--LGHGDSEDQLKPKKV-EELAGHN 3811

Query: 371  VSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            V  VAC  G+  T  VS  G ++++GDG +G LG G       P++++SL+   V  V C
Sbjct: 3812 VLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVEC 3871

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFV 487
            G   + A+              G ++TWG  D  RLGH   +    P  V   L     +
Sbjct: 3872 GSQFSVALT-----------AAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVI 3920

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
            Q + G +  V  T  G+V+T G    GQLG+          +   LK + +  ++ GS H
Sbjct: 3921 QVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAH 3980

Query: 548  VAVLTSGGSVY 558
                ++  S +
Sbjct: 3981 TVSWSTSKSAH 3991



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 26/278 (9%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +      P K  + +  ++   +A G     IVS  G++F  
Sbjct: 2653 KVFVWGLNDK--DQLGGLKGSKIKEP-KFSEVISNLKPMNIAGGSKSLFIVSHDGKVFAC 2709

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGG 451
            G+GT G LG G+  NV+QPK +  L    +K VA   G  H  A+            I G
Sbjct: 2710 GEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALT-----------IDG 2758

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++F+WG+ + G+LGH +      P  V  L        +CG   +  +T  G++YT GS 
Sbjct: 2759 RVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSG 2818

Query: 512  VHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGS--YHVAVLTSGGSVYTWGKNAN 565
             +G+LG+    P+ K + +      L  E V  ++ GS       LT    VY+WG    
Sbjct: 2819 EYGRLGHGDNVPQLKPKQVRA----LSHERVVQVACGSRDAQTLALTERHWVYSWGDGDF 2874

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG G S     P  VE L  +QV  V CG+  + A+
Sbjct: 2875 GKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL 2912



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 18/276 (6%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG I+ WGHN+ G  L G   ++       + D L  +R  ++  GE     +++ G+++
Sbjct: 3618 SGVIHGWGHNHRG-QLGGVEGAKVK--TATICDALTALRPVQIVGGEQTLFALTSDGKVY 3674

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +E+L+ + V  VA         V+     C +    G
Sbjct: 3675 ATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVA---------VNSGGKHCLALTSSG 3725

Query: 452  KLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             +F+WG+ D G+LGH  G + L   P  +  L D   V  +CG   +  +T  G++YT G
Sbjct: 3726 DVFSWGEGDDGKLGH--GSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWG 3783

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL--TSGGSVYTWGKNANGQ 567
               +G+LG+  ++D+       +L    V  ++ GS     L  +  G V++WG    G+
Sbjct: 3784 KGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGK 3843

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G S   + P  +++L++  V  V CGS  + A+
Sbjct: 3844 LGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVAL 3879


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 216/457 (47%), Gaps = 40/457 (8%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            K+I  +V  WG   +  LGG  G  +              LP L ++   L    I  G+
Sbjct: 3460 KEIQTNVFCWGLNDKDQLGGPKGSKIK-------------LPTLNDNLSALRCVQIVGGS 3506

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSC--GEFQTCA 328
            K    VT+EG+V+  GE  +GRLG  +    VS P+ +  LS   ++ V+   G   + A
Sbjct: 3507 KSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLA 3566

Query: 329  LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
            LT  G++++WG  + G   +G   SR +    +L + L   RV  +ACG  H+A ++++G
Sbjct: 3567 LTTDGKVFSWGEGDDGK--LG-HFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNG 3623

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKS 446
             L+T+G G +G LGHG+     +PK+V++L   +V  VACG     T A+ D        
Sbjct: 3624 DLYTWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTD-------- 3675

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
                GK+++WGD D G+LG    E   +P  V RL D    Q  CG   ++ LT  G+V+
Sbjct: 3676 ---EGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVW 3732

Query: 507  TMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            T G   + +LG+   A  R   +VEG LK + +  ++ G+ H   +T  G V+ WG N +
Sbjct: 3733 TWGKGDYFRLGHGTDAHVRKPQIVEG-LKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDH 3791

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGS--SITAAICLHKSISVGDQSSCSQCRMP 623
            GQ G G +     P  V  L   ++  V CGS  SI  A       +  +    S  R  
Sbjct: 3792 GQQGNGTTTVNRKPALV-VLEGYKISKVACGSSHSIAWATTDMSVPTTHEPVLFSTSRDA 3850

Query: 624  FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
             G      N  N   +  SA S + + + +L P+  K
Sbjct: 3851 LGATLLGVNDNNSEENSVSAASAQSVTSKALRPSLAK 3887



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 195/399 (48%), Gaps = 36/399 (9%)

Query: 223  IWGEG-VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG 281
            IWG G    G +GG VDG+  +     +AL       AV   +Q +  G +    VT EG
Sbjct: 4463 IWGWGHNHRGQLGG-VDGAKVKQPVSCEAL-------AVTRPIQLVG-GEQTLFAVTAEG 4513

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWG 339
            +VF  G G  GRLG      VS P  +E +  + ++  +V+ G     AL+  GE+Y+WG
Sbjct: 4514 KVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWG 4573

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
                G    G R       PR + D+L G  V  +A G  H+A ++ +G+L+T+G G +G
Sbjct: 4574 EGEDGKLGHGNRSPCDR--PR-VIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYG 4630

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWG 457
             LGHG+ ++  +PK VE+L+  +V  +ACG     T  I D              +++WG
Sbjct: 4631 RLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITD-----------DDNVWSWG 4679

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D D G+LG    +   +P  +  L     ++  CG   +V LT  G VYT G   + +LG
Sbjct: 4680 DGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLG 4739

Query: 518  NPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            +       + R ++ ++ K     V  ++ GS H    T  G V++WG N  GQLG G +
Sbjct: 4740 HGSDDHVRRPRKVSALQNKK----VIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTT 4795

Query: 574  QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
               + P  V +L  +++  V CGS+ + A   +K++S G
Sbjct: 4796 NAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSAG 4834



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 133/287 (46%), Gaps = 16/287 (5%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
            KH   +T +GEVF WG G  G+LGH    +   P L+  LSG  V  + CG   + ALT
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSG 388
            +GE+Y+WG  N G   +G   S     P  L     G R+  VAC  G+  T  V+ SG
Sbjct: 688 SNGEVYSWGKGNFGR--LGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDAQTLAVTDSG 744

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++++GDG +G LG G       PK +E L G  V  V CG   + A+            
Sbjct: 745 AVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTK---------- 794

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G ++TWG  D  RLGH   +    P  +  L        + G +  + +T  G++Y  
Sbjct: 795 -SGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGW 853

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           G    GQLGNP   + +   + G ++ + + G++ G       TSGG
Sbjct: 854 GRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 184/410 (44%), Gaps = 35/410 (8%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G+++ WG    G+LG      V  P   E L+      +  GE    A+T  G+++  G+
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
               G   VG   S SH  P +L +++  V + K+A   G  H   +S  G+++++G+G  
Sbjct: 4521 GAGGRLGVGGTESVSH--PTQL-ESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGED 4577

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN     +P+ ++SLRG +V  +A G  H+A I              G+L+TWG 
Sbjct: 4578 GKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACIT-----------ANGELYTWGK 4626

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +  P  V  L  +  V  +CG     T+ +T    V++ G   +G+L
Sbjct: 4627 GRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKL 4686

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            G   +    + +    L+ + V  +  GS     LT  GSVYTWGK    +LG G     
Sbjct: 4687 GRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHV 4746

Query: 577  ETPTFVEALRDRQVESVVCGS-SITAAICLHKSISVGDQ----------SSCSQCRMPFG 625
              P  V AL++++V  V CGS    A     +  S GD           ++  + R+   
Sbjct: 4747 RRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVAS 4806

Query: 626  FRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
               KK N   CG     A ST K ++A   P+           YNHLQ I
Sbjct: 4807 LLGKKINRVACGSAHSLAWSTNKAVSAGKLPSD------IPMEYNHLQNI 4850



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 142/278 (51%), Gaps = 18/278 (6%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            LT  GE+++WG+ + G   +G    ++H  P  L   L G +V+K+ CG  ++  ++++
Sbjct: 633 GLTSDGEVFSWGNGDGGK--LGHGDYQNHEEP-ALITGLSGKQVAKICCGSSYSVALTSN 689

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCK 445
           G+++++G G FG LGHG+ ++ + P  ++  +G ++  VACG     T A+ D       
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTD------- 742

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G +++WGD D G+LG    +    P  + +L+  D V+  CG   ++ LT  G V
Sbjct: 743 ----SGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAV 798

Query: 506 YTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           YT G   + +LG+  +   R    +E  L  + VK I+ GS H   +T  G +Y WG+N 
Sbjct: 799 YTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDGELYGWGRNE 857

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            GQLG         PT +  +  + +  V CG + T A
Sbjct: 858 QGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA 895



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 26/287 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG G      GG +     QN  +     P L+       V  I  G+ ++  +T 
Sbjct: 639 EVFSWGNG-----DGGKLGHGDYQNHEE-----PALITGLSGKQVAKICCGSSYSVALTS 688

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
            GEV+ WG+G  GRLGH  + D + P L++   G  +  V+C  G+ QT A+T SG +Y+
Sbjct: 689 NGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYS 748

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  ++G   +G   +     P K+ + L G  V +V CG   +  ++ SG ++T+G G 
Sbjct: 749 WGDGDYGK--LGRGGNDGCKTP-KVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGD 805

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
              LGHG   +   PK++E+L   KVK +A G  H  AI +            G+L+ WG
Sbjct: 806 NYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE-----------DGELYGWG 854

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
             ++G+LG+        PT +  +   + +  +CG   T   T  G+
Sbjct: 855 RNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 30/293 (10%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSK 373
           VQ ++C E     L+K+G++Y   + +    L            ++L  F   + +R++ 
Sbjct: 577 VQQIACSERCCLILSKAGKVYMLYYTSLSPTL------------QQLNGFGDREVIRIAS 624

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
              G+ H   +++ G++F++G+G  G LGHG+ QN  +P  +  L G +V  + CG  ++
Sbjct: 625 HPDGK-HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYS 683

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
            A+         SN   G++++WG  + GRLGH   E +  P  +        V  +CG 
Sbjct: 684 VALT--------SN---GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGS 732

Query: 494 --MLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAV 550
               T+ +T  G VY+ G   +G+LG       ++  V+E  + ++ V+ +  G+     
Sbjct: 733 GDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVR-VYCGNQFSMA 791

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           LT  G+VYTWGK  N +LG G       P  +EAL  ++V+ +  GS    AI
Sbjct: 792 LTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAI 844



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 22/239 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+G  G    G+       ++ Q   +L K  +   ++DV   S  A+  A VT 
Sbjct: 691 EVYSWGKGNFGRLGHGS-------SEDQTTPMLLKFFKGHRIVDVACGSGDAQTLA-VTD 742

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G V+ WG+G  G+LG   N     PK++E L G +V  V CG   + ALTKSG +YTWG
Sbjct: 743 SGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWG 802

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             ++     G      H  P+++ + L   +V  +A G  H   ++  G+L+ +G    G
Sbjct: 803 KGDNYRLGHGTEDHARH--PKQI-EALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQG 859

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGP-----------WHTAAIVDIMVDRCKSN 447
            LG+ ++ N ++P  +  + G  +  VACGP           W  ++ V  +VD CKS 
Sbjct: 860 QLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQWIVSSRVPFIVDVCKST 918



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 21/225 (9%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SGQ++ +G    G LG  +   V QP   E+L   +   +  G     A+          
Sbjct: 4460 SGQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVT--------- 4510

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GK+F  G    GRLG    E    PT +  +  V    +  + G    + L+  G+
Sbjct: 4511 --AEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGE 4568

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            VY+ G    G+LG+    P  + R I  + GK     V  I++G  H A +T+ G +YTW
Sbjct: 4569 VYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGK----EVVDIAAGGAHSACITANGELYTW 4624

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            GK   G+LG GDS+++  P  VEAL+  +V  + CGS     +C+
Sbjct: 4625 GKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCI 4669



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 61/115 (53%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           +GLT  G+V++ G+   G+LG+   ++     +   L  + V  I  GS +   LTS G 
Sbjct: 632 MGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGE 691

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
           VY+WGK   G+LG G S+++ TP  ++  +  ++  V CGS     + +  S +V
Sbjct: 692 VYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 210/447 (46%), Gaps = 38/447 (8%)

Query: 221  VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+K   +V
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFVV 3093

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEI 335
            +++G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     ALT  G++
Sbjct: 3094 SQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3153

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            ++WG    G    G R +     PR L + L   ++  +ACG  H+A +S+ G+L+T+G 
Sbjct: 3154 FSWGEGEDGKLGHGNRSTLDK--PR-LVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3210

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G LGHG+     +PK V +L G +V  VACG    A  + +  D        G +F+
Sbjct: 3211 GEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGS-RDAQTLALTED--------GAVFS 3261

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD D G+LG    E    P  + RL     +Q  CG   ++ LT  G+V+T G   + +
Sbjct: 3262 WGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYR 3321

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LG+   +          L+   V  ++ G+ H   +T  G VY WG N +GQ G G++  
Sbjct: 3322 LGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFV 3381

Query: 576  RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
             + P  V  L    V  V CGSS + A  L  + S+ ++    +  +PFG  R      +
Sbjct: 3382 NKKPALVIGLDAVFVNRVACGSSHSMAWGLPNA-SLDEE---KRGPVPFGSTRDPLGGSS 3437

Query: 636  CGLHFCSACSTKKIINASLTPN-KGKP 661
             G++      T   ++   TP+  GKP
Sbjct: 3438 LGIY---ETETPPTVHMHTTPDVAGKP 3461



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 184/381 (48%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL         +L    ++ G +    VT +G++F  G G 
Sbjct: 4210 GQLGG-LEGSRIKTPTPCEAL--------SLLRPIQLAGGEQSLFAVTPDGKLFATGYGS 4260

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4261 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4320

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 4321 GNRMSYDR---PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4377

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4378 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4426

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     ++  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4427 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4486

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 4487 PKKVAALQGK----KIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4542

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4543 AALQGKHIVKVTCGSAHTLAL 4563



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 157/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T +GEV+ WGEG+DG+LGH   M    PKL+E
Sbjct: 4274 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLE 4333

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 4334 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4390

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4391 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4450

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+              G ++TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4451 CGSQFSVALTK-----------SGAVYTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4497

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 4498 IISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4553

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4554 TCGSAHTLALST 4565



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 142/330 (43%), Gaps = 49/330 (14%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P LL     L  + ++       L+ +EG+++ W   K            + P+L++   
Sbjct: 564 PALLTCKFQL--KQVACSEDMVVLLCQEGKLYNWPIAKPE----------TEPQLLDFAE 611

Query: 313 GINVQSVS----CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW------LPRKL 362
             N   VS    C      A+  +   Y+WG        VG+ R   H       LP K+
Sbjct: 612 IANETFVSIAAHCEGRHFLAVDSNHNAYSWG--------VGDSRRLGHGDCHARELPTKI 663

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              +   RV  V CG  ++A ++  G L+T+G GT+G LGHGN  +   P  V +L+  +
Sbjct: 664 ESLVR--RVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQ 721

Query: 423 VKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
           V  VA G    HT  +             GG ++ WGD D G+LG+      L P  +  
Sbjct: 722 VLDVALGSGDAHTLCLTR-----------GGLVYAWGDGDYGKLGNGSCNSSLQPLLIEC 770

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSA--VHGQLGNPKAKDRSITVVEGKLKEEFV 538
           L     V A  G   ++ LT  G++Y+ G A  +  QL     +  S+  +   L+ + +
Sbjct: 771 LPRVQRVFA--GSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRI 828

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
             ++ G  H   L+S G ++ WG+N N Q+
Sbjct: 829 VHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4412 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 4461

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + +GE+YTWG
Sbjct: 4462 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4521

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4522 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4566



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 12/204 (5%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           ++WG  D  RLGH D   + LPT +  LV        CG   +  +T  G +YT G   +
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCSYSAAITLRGNLYTWGRGTY 697

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G+LG+  + D+ +  +   LK+  V  ++  SG  H   LT GG VY WG    G+LG G
Sbjct: 698 GRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNG 757

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
                  P  +E L   +V+ V  GS  + A+     +    ++SC       G +  + 
Sbjct: 758 SCNSSLQPLLIECL--PRVQRVFAGSQFSLALTCEGQLYSWGKASC------LGHQLVER 809

Query: 632 NCYNCGL-HFCSACSTKKIINASL 654
           N   C +    ++   K+I++ ++
Sbjct: 810 NVQGCSVPRLITSLQHKRIVHVAV 833



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 106/253 (41%), Gaps = 35/253 (13%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTP----------- 4249

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4250 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYA 4309

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEF----VKGISSGSYHVAVLTSGGSVYTWG 561
             G    G+LG  N  + DR       KL E      V  I+ GS H A +T+ G V TWG
Sbjct: 4310 WGEGEDGKLGHGNRMSYDRP------KLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4363

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSS 616
            K   G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD   
Sbjct: 4364 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4423

Query: 617  CSQ-----CRMPF 624
              +     C++P+
Sbjct: 4424 LGRGGSDGCKLPY 4436



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
            ++K VAC         D++V  C+     GKL+ W  A        + E +LL      
Sbjct: 571 FQLKQVACSE-------DMVVLLCQE----GKLYNWPIAKP------ETEPQLLDFAEIA 613

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVK 539
              F  + A C     + +      Y+ G     +LG+     R + T +E  ++   V+
Sbjct: 614 NETFVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVRR--VQ 671

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            +  G  + A +T  G++YTWG+   G+LG G+S ++  P  V AL+D QV  V  GS  
Sbjct: 672 SVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGD 731

Query: 600 TAAICLHK 607
              +CL +
Sbjct: 732 AHTLCLTR 739


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 206/439 (46%), Gaps = 34/439 (7%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 728  QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 774

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V+++G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 775  KSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 834

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L + L   ++  VACG  H+A +S+ G+
Sbjct: 835  TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAKKIRDVACGSSHSAAISSQGE 891

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 892  LYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGS-RDAQTLALTED------- 943

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     VQ  CG   ++ LT  G+V+T G
Sbjct: 944  -GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 1002

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 1003 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 1062

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
             G++   + P  V  L    V  V CGSS + A  L  + +  ++    +  +PFG  R 
Sbjct: 1063 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNASTDEEK----RGPVPFGSTRD 1118

Query: 630  KHNCYNCGLHFCSACSTKK 648
                 + G++      T K
Sbjct: 1119 PLGGSSLGIYEAETVQTLK 1137



 Score =  160 bits (405), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 1808 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 1858

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 1859 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 1918

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 1919 GNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 1975

Query: 409  VSQPKEVESLRGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 1976 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 2024

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     V+  CG   +V LT  G VYT G     +LG+       +
Sbjct: 2025 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 2084

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 2085 PKKVAALQGKK----IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 2140

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 2141 AALQGKHIVKVTCGSAHTLAL 2161



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 159/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 1872 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 1931

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 1932 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 1988

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 1989 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 2048

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 2049 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 2095

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 2096 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 2151

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 2152 TCGSAHTLALST 2163



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 2010 NVWSWGDGDYGKLGRGGSDG----------CKLPYKIESLAGLGVVKVECGSQFSVALTK 2059

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 2060 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 2119

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 2120 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 2164



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 1847

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 1848 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 1907

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 1908 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY 1965

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 1966 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 2025

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 2026 GSDGCKLPY 2034


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 188/393 (47%), Gaps = 30/393 (7%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 1828 QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 1874

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V + G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 1875 KSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 1934

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L +TL   ++  VACG  H+A +S+ G+
Sbjct: 1935 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVETLRSKKIRDVACGSSHSAAISSQGE 1991

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 1992 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGS-RDAQTLALTED------- 2043

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     +Q  CG   ++ LT  G+V+T G
Sbjct: 2044 -GSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 2102

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +        G L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 2103 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2162

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             G++   + P  V  L    V  V CGSS + A
Sbjct: 2163 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score =  157 bits (398), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 185/381 (48%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 2988 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 3038

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG       + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 3039 GGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 3098

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 3099 GNRMSYDR---PKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 3155

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +P+ VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 3156 QLRPQLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 3204

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     ++  CG   +V LT  G VYT       +LG+       +
Sbjct: 3205 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRR 3264

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 3265 PKKVAALQGK----KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLV 3320

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 3321 AALQGKHIVKVTCGSAHTLAL 3341



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 158/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 3052 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 3111

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G+NV  ++CG   + A+T SG + TWG   +G   +G   S     P +L + L G 
Sbjct: 3112 HLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-QLVEALLGY 3168

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 3169 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 3228

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TW   D  RLGH  VD  R+  P  V  L    
Sbjct: 3229 CGSQFSVALT-------KSGAV----YTWSKGDFHRLGHGSVDHVRR--PKKVAALQGKK 3275

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 3276 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 3331

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 3332 TCGSAHTLALST 3343



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 23/247 (9%)

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            T+  +R   +A G     IV  +G+++  G+GT G LG G   NV  P ++  L    VK
Sbjct: 1861 TISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVK 1920

Query: 425  SVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTR 480
             VA   G  H  A+            + GK+F+WG+ + G+LGH  G R  L  P  V  
Sbjct: 1921 KVAVHSGGKHALALT-----------LDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVET 1967

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  ++  G++YT G   +G+LG+     + K + +  + G+   +
Sbjct: 1968 LRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQ 2027

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  GSV++WG    G+LG G S+  +TP  +E L    V  + CG
Sbjct: 2028 VACG--SRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECG 2085

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 2086 AQFSLAL 2092



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 79/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 3190 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 3239

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ W +G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 3240 SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 3299

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 3300 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 3344



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPT---CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            +  WG  DK +LG + G +  +PT    ++RL        S   +  VG  G  KVY  G
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGS-KSLFIVGQNG--KVYACG 1890

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQ 567
               +G+LG     +  +      L +  VK   + SG  H   LT  G V++WG+  +G+
Sbjct: 1891 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 1950

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G+    + P  VE LR +++  V CGSS +AAI
Sbjct: 1951 LGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI 1986



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 3027

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 3028 DGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 3087

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 3088 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMNVADIACGSAHSAAITASGHVLTWGKGRY 3145

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 3146 GRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 3205

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 3206 GSDGCKLPY 3214



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            GK++  G+   GRLG        LP  +  L  +    V    G    + LT  GKV++ 
Sbjct: 1884 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 1943

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L+ + ++ ++ GS H A ++S G +YTWG    G+L
Sbjct: 1944 GEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 2003

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            G GD+  +  P  V AL  R+V  V CGS     + L +  SV
Sbjct: 2004 GHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSV 2046


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 183/380 (48%), Gaps = 29/380 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G   G   +         V  L P L ++  ++  QN S       L+  
Sbjct: 3021 DVYLWGNGRYGQLAGTGTN-------LTVPTLAPSLSQTQQVVCGQNCSF------LIQS 3067

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG+ GRLG   + D+  P ++    G  V  +  SCG +  + ALT++GE++
Sbjct: 3068 NGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3127

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  + G   +G   +     P+++ + L G  V ++ACG  H+A+V+  G+LFT+G G
Sbjct: 3128 SWGDGDFGK--LGHGNNERQRRPKQI-EALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              G LG  +  N   P+ V +L G  V  V+CG  HT  +          +  G  ++ +
Sbjct: 3185 ESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVL----------SLDGMAVWAF 3234

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG      K  P  V +L +    +  CG   +V +   G VYT G      L
Sbjct: 3235 GDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGL 3294

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             +   K+RS   V   L+  F++ I+ G  HV  L+S G VY WG N+ GQLGLG     
Sbjct: 3295 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPV 3354

Query: 577  ETPTFVEALRDRQVESVVCG 596
            + PT + AL+ + ++ +  G
Sbjct: 3355 KEPTLITALQGKNIKQISAG 3374



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 159/356 (44%), Gaps = 21/356 (5%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           LLPKL +     D Q I  G      V+ +G V   G+G  GRLG   + + S PK +  
Sbjct: 403 LLPKLTQG--FSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVL 460

Query: 311 LSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
               N++ VS     +  T A+T  GE+++WG   +G   +G   S +   P+ +   L 
Sbjct: 461 EPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGK--LGHGNSATQKYPKIIQGPLF 518

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
              V   + G  H+A V+  G+L+T+G+G FG LGH + Q+ + P  V+ + G  V  VA
Sbjct: 519 SKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISG--VGQVA 576

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HT A+             G  ++++G  D G+LGH D  R   P  +  L  F   
Sbjct: 577 CGSSHTIAVAQD----------GRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIR 626

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           +   G   ++ LT  G+V+  G       G+ +        VE  L    +  IS G  H
Sbjct: 627 KVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSH 685

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
              L+    VY WG N  GQ G G +    T P  V  L    ++ +  G+S + A
Sbjct: 686 CLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA 741



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 160/345 (46%), Gaps = 28/345 (8%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG     +L       +  PKL +  S  + Q++  G++ T +++  G +   G  +
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFS--DAQTIEAGQYCTFSVSTDGSVKACGKGS 440

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVR----VSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           +G   +G+  ++S  LP+KL   L+  R    VS     + HT  ++  G++F++GDG +
Sbjct: 441 YGRLGLGDSNNQS--LPKKL--VLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496

Query: 399 GVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LGHGN      PK ++  L    V S + G  H+AA+              G+L+TWG
Sbjct: 497 GKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTK-----------DGELYTWG 545

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
           + D GRLGH D + + +PT V  +      Q +CG   T+ +   G+ V++ G   +G+L
Sbjct: 546 EGDFGRLGHSDSQSRNMPTLVKDISGVG--QVACGSSHTIAVAQDGRTVWSFGGGDNGKL 603

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G+          V   L    ++ + +GS     LTS G V+ WG      LG G S+  
Sbjct: 604 GHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG--CGSCLGCGSSETT 661

Query: 577 ET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              P FVE L   ++  + CG S   A+     +     ++  QC
Sbjct: 662 SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQC 706



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 23/306 (7%)

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H+  +T+ GEVF WG+G  G+LGH  N     PK +E L G +V  ++CG   +  +T  
Sbjct: 3116 HSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTAD 3175

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-LF 391
            G+++T+G    G   +G+R + +  LP ++   L+G  V +V+CG  HT ++S  G  ++
Sbjct: 3176 GKLFTFGSGESGR--LGQRSTSNKMLPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVW 3232

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +GDG +G LG G+      P++VE L    +K V CG   +  +           A  G
Sbjct: 3233 AFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVV-----------ACDG 3281

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
             ++T+G      L     + +  P  V  L        + G    + L+  G VY  G  
Sbjct: 3282 HVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCN 3341

Query: 512  VHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
              GQLG    NP  +   IT ++GK     +K IS+G  H +  T+  +    G   N Q
Sbjct: 3342 SEGQLGLGHCNPVKEPTLITALQGK----NIKQISAGRCHSSAWTTPSTSKNSGGPGNLQ 3397

Query: 568  LGLGDS 573
            LGL  S
Sbjct: 3398 LGLPQS 3403



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 26/288 (9%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTCALT 330
           H   +T +GEVF WG+G+ G+LGH  +     PK+++    S I V S S G   + A+T
Sbjct: 478 HTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVT 536

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ- 389
           K GE+YTWG  + G   +G   S+S  +P  L   + G  V +VACG  HT  V+  G+ 
Sbjct: 537 KDGELYTWGEGDFGR--LGHSDSQSRNMP-TLVKDISG--VGQVACGSSHTIAVAQDGRT 591

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           ++++G G  G LGHG+   V +PK +E+L G  ++ V  G   + A+             
Sbjct: 592 VWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTS----------- 640

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G++F WG       G  +    L P  V  L     +  SCG    + L+   +VY  G
Sbjct: 641 AGQVFAWGCGSCLGCGSSE-TTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWG 699

Query: 510 SAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
           +   GQ G      P  + + +  +EG   ++   G S      AV T
Sbjct: 700 NNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPT 747



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 137/274 (50%), Gaps = 21/274 (7%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG+  +G  L G   + +  +P  L  +L   +  +V CG+  + ++ ++G +   
Sbjct: 3021 DVYLWGNGRYG-QLAGTGTNLT--VP-TLAPSLS--QTQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G +G LG GN  ++  P  + + +G  V  +  +CG   H+ A+ +            
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTET----------- 3123

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + ER+  P  +  L   D VQ +CG   +  +T  GK++T GS
Sbjct: 3124 GEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGS 3183

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT-SGGSVYTWGKNANGQLG 569
               G+LG     ++ +      L+   V  +S G  H  VL+  G +V+ +G    G+LG
Sbjct: 3184 GESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3243

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S  +  P  VE L ++ ++ V CG+  +  +
Sbjct: 3244 AGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVV 3277



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 29/248 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+G  G  +G     +    K     L  K++ SA        S G +H+A VTK
Sbjct: 487 EVFSWGDGEYG-KLGHGNSATQKYPKIIQGPLFSKIVVSA--------SAGYRHSAAVTK 537

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
           +GE++ WGEG  GRLGH  +   + P LV+ +SG+    V+CG   T A+ + G  ++++
Sbjct: 538 DGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG--QVACGSSHTIAVAQDGRTVWSF 595

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  ++G   +G   +   + P K+ + L G  + KV  G   +  ++++GQ+F +G G+ 
Sbjct: 596 GGGDNGK--LGHGDTNRVYRP-KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS- 651

Query: 399 GVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
             LG G+ +  S +P+ VE L   K+  ++CG  H           C + +   +++ WG
Sbjct: 652 -CLGCGSSETTSLRPRFVEDLSITKIIDISCGDSH-----------CLALSHENEVYAWG 699

Query: 458 DADKGRLG 465
           +   G+ G
Sbjct: 700 NNTMGQCG 707



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 18/226 (7%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           ++  WGEG  G      +  S SQ++      +P L++   +  V  ++ G+ H   V +
Sbjct: 540 ELYTWGEGDFG-----RLGHSDSQSRN-----MPTLVKD--ISGVGQVACGSSHTIAVAQ 587

Query: 280 EGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           +G  V+ +G G +G+LGH     V  PK++E L G  ++ V  G   + ALT +G+++ W
Sbjct: 588 DGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAW 647

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  +     +G   S +  L  +  + L   ++  ++CG+ H   +S   +++ +G+ T 
Sbjct: 648 GCGS----CLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 703

Query: 399 GVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           G  G G+    +++PK+V  L G+ ++ +  G  H+ A   +  DR
Sbjct: 704 GQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 749



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 19/220 (8%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G+G +G L  G   N++ P    SL   + + V CG   +  I        +SN  
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLS--QTQQVVCGQNCSFLI--------QSN-- 3068

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-MLTVGLTGLGKVY 506
             G +   G+   GRLG  + +   +PT ++    +   Q   SCG    ++ LT  G+V+
Sbjct: 3069 -GVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3127

Query: 507  TMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            + G    G+LG+    + R    +E    E+ V+ ++ G  H AV+T+ G ++T+G   +
Sbjct: 3128 SWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQ-LACGFRHSAVVTADGKLFTFGSGES 3186

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG   +  +  P  V AL    V  V CG + T  + L
Sbjct: 3187 GRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSL 3226



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 10/160 (6%)

Query: 450  GGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
            GGK  ++ WG+   G+L    G    +PT    L      Q  CG+  +  +   G V  
Sbjct: 3017 GGKSDVYLWGNGRYGQLAGT-GTNLTVPTLAPSLSQTQ--QVVCGQNCSFLIQSNGVVTA 3073

Query: 508  MGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +G   +G+LG   + D      I+  +G +  + V    S  + +A LT  G V++WG  
Sbjct: 3074 VGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMA-LTETGEVFSWGDG 3132

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G+++ +  P  +EAL+   V  + CG   +A +
Sbjct: 3133 DFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVV 3172



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+++ S   L +++I++G +H   ++  G+V+ WG   +G+LG      V  P L+  L 
Sbjct: 3305 PQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQ 3364

Query: 313  GINVQSVSCGEFQTCALT 330
            G N++ +S G   + A T
Sbjct: 3365 GKNIKQISAGRCHSSAWT 3382


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 188/392 (47%), Gaps = 46/392 (11%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3997 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4043

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     P +      G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4104 SWGDGDYGK--LGHGNSDRQRRPXQ------GEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4155

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V +L G ++  VACG  HT A+          +A G  ++ +
Sbjct: 4156 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----------SADGSMVWAF 4205

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  +  L      + +CG   +V LT  G VYT G      +
Sbjct: 4206 GDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 4263

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 4264 GLPEGRARNHNRPQQIPVLAGVIIED----VAVGAEHTLALASNGDVYAWGSNSEGQLGL 4319

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 4320 GHTNHVREPTLVTGLQGKNVRQISAGRCHSAA 4351



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 34/278 (12%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3997 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4099

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P         + VQ SCG   +  +T  GK++T G+
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4154

Query: 511  AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              +G+LG     N K  +R +T +EG    +   G++   + +AV   G  V+ +G    
Sbjct: 4155 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQVACGLN---HTLAVSADGSMVWAFGDGDY 4210

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG+S  + +P  ++ L    ++ V CG+  + A+
Sbjct: 4211 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4248



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 25/229 (10%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +WH   +     ++ +G G  G L     +NV  P    S    + + V CG   T  I 
Sbjct: 3989 DWH---LGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAAPSFS--QAQQVICGQNCTFVI- 4041

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ--ASCGR-M 494
                   ++N   G +   G+   GRLG  + +   + T ++ L  F   Q   SCG   
Sbjct: 4042 -------QAN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4091

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
             ++ LT  G+V++ G   +G+LG+  + DR     +G   EE V+ +S G  H AV+TS 
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNS-DRQRRPXQG---EEVVQ-MSCGFKHSAVVTSD 4146

Query: 555  GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G ++T+G    G+LGLG++  ++ P  V AL   Q+  V CG + T A+
Sbjct: 4147 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4195



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4287 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGR 4346

Query: 324  FQTCALT 330
              + A T
Sbjct: 4347 CHSAAWT 4353


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 188/393 (47%), Gaps = 30/393 (7%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 2908 QDVPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 2954

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V+++G+VF  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 2955 KSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3014

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L + L   ++  +ACG  H+A +S+ G+
Sbjct: 3015 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVEALRAKKIRDIACGSSHSAAISSQGE 3071

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGS-RDAQTLALTED------- 3123

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     VQ  CG   ++ LT  G+V+T G
Sbjct: 3124 -GAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWG 3182

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +          L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 3183 KGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3242

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             G++   + P  V  L    V  V CGSS + A
Sbjct: 3243 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4081 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4131

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   S P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4132 GGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 4192 GNRLSYDR---PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4248

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4249 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4297

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     ++  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4298 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 4357

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V
Sbjct: 4358 PKKVAALQGK----KIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLV 4413

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4414 AALQGKHIVKVTCGSAHTLAL 4434



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 159/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T +GEV+ WGEG+DG+LGH   +    PKL+E
Sbjct: 4145 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLE 4204

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 4205 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4261

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4262 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4321

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4322 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4368

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 4369 IISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4424

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4425 TCGSAHTLALST 4436



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 133/296 (44%), Gaps = 25/296 (8%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           L++KEG+++ W   K       ++  D+     +   S        C      A+  +  
Sbjct: 609 LLSKEGKLYNWHISKPDTEPQPLDFGDIGSETFISIAS-------HCEGRHFLAVDNNFN 661

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            Y+WG  ++     G+  SR   LP K+   +   RV  V CG  ++A ++  G L+T+G
Sbjct: 662 AYSWGTGDNRRLGHGDCHSRE--LPTKIESLVR--RVKSVYCGCSYSAAITLRGNLYTWG 717

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            G +G LGHG   +   P  V +L+  +V  VA G      +       C +N   G ++
Sbjct: 718 RGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTL-------CLTNE--GLVY 768

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA--V 512
            WGD D G+LG+      L P  +  L     V A  G   ++ LTG G++Y+ G A  +
Sbjct: 769 AWGDGDYGKLGNASCNSSLQPLLIECLPRVQRVFA--GSQFSLALTGEGQLYSWGKASCL 826

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
             QL     +  S+  +   L+ + +  ++ G  H   L+S G ++ WG+N N Q+
Sbjct: 827 GHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 23/247 (9%)

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            T+  +R   +A G     +VS  G++F  G+GT G LG G   NV  P ++  L    VK
Sbjct: 2941 TISRLRPIHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVK 3000

Query: 425  SVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTR 480
             VA   G  H  A+            + GK+F+WG+ + G+LGH  G R  L  P  V  
Sbjct: 3001 KVAVHSGGKHALALT-----------LDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEA 3047

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  ++  G++YT G   +G+LG+     + K + +T + G    +
Sbjct: 3048 LRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQ 3107

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G+V++WG    G+LG G S+   TP  +E L    V  + CG
Sbjct: 3108 VACG--SRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECG 3165

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 3166 AQFSLAL 3172



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 35/306 (11%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-F 363
           P L+ C    +V+ V+C +     L+K G++Y W              S+    P+ L F
Sbjct: 588 PALLNC--KFHVKQVACSKDIVLLLSKEGKLYNW------------HISKPDTEPQPLDF 633

Query: 364 DTLDGVRVSKVA--CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
             +       +A  C   H   V  +   +++G G    LGHG+  +   P ++ESL   
Sbjct: 634 GDIGSETFISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR- 692

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
           +VKSV CG  ++AAI            + G L+TWG  + GRLGH   + + LPT V  L
Sbjct: 693 RVKSVYCGCSYSAAIT-----------LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMAL 741

Query: 482 VDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            D   V  + G     T+ LT  G VY  G   +G+LGN         ++   L    V+
Sbjct: 742 KDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPR--VQ 799

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNA--NGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
            + +GS     LT  G +Y+WGK +    QL   + Q    P  + +L+ +++  V  G 
Sbjct: 800 RVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGV 859

Query: 598 SITAAI 603
           +   A+
Sbjct: 860 THCLAL 865



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 25/215 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP  +ES V   V+++  G  ++A +T  G ++ WG G  GRLGH ++ D   P +V  L
Sbjct: 683 LPTKIESLVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMAL 741

Query: 312 SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
               V  V+   G+  T  LT  G +Y WG  ++G   +G     S   P  L + L   
Sbjct: 742 KDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGK--LGNASCNSSLQPL-LIECLP-- 796

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKS 425
           RV +V  G   +  ++  GQL+++G  +   LGH     N+Q  S P+ + SL+  ++  
Sbjct: 797 RVQRVFAGSQFSLALTGEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIVD 854

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           VA G           V  C + +  G++F WG  D
Sbjct: 855 VAVG-----------VTHCLALSSAGEIFGWGRND 878



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4283 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 4332

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + +GE+YTWG
Sbjct: 4333 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4392

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4393 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4437



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 2/153 (1%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +  WG  DK +LG + G +  +PT    +     +  + G      ++  GKV+  G   
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG     +  +      L +  VK   + SG  H   LT  G V++WG+  +G+LG 
Sbjct: 2974 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3033

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+    + P  VEALR +++  + CGSS +AAI
Sbjct: 3034 GNRTTLDKPRLVEALRAKKIRDIACGSSHSAAI 3066



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 12/204 (5%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           ++WG  D  RLGH D   + LPT +  LV        CG   +  +T  G +YT G   +
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNY 721

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G+LG+  + D+ +  +   LK+  V  ++  SG  H   LT+ G VY WG    G+LG  
Sbjct: 722 GRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNA 781

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKH 631
                  P  +E L   +V+ V  GS  + A+     +    ++SC       G +  + 
Sbjct: 782 SCNSSLQPLLIECL--PRVQRVFAGSQFSLALTGEGQLYSWGKASC------LGHQLVER 833

Query: 632 NCYNCGL-HFCSACSTKKIINASL 654
           N   C +    ++   K+I++ ++
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAV 857



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 106/253 (41%), Gaps = 35/253 (13%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4120

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4121 DGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYA 4180

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEF----VKGISSGSYHVAVLTSGGSVYTWG 561
             G    G+LG  N  + DR       KL E      V  I+ GS H A +T+ G V TWG
Sbjct: 4181 WGEGEDGKLGHGNRLSYDRP------KLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4234

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSS 616
            K   G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD   
Sbjct: 4235 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK 4294

Query: 617  CSQ-----CRMPF 624
              +     C++P+
Sbjct: 4295 LGRGGSDGCKLPY 4307



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 2/163 (1%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            GK+F  G+   GRLG        LP  +  L  +    V    G    + LT  GKV++ 
Sbjct: 2964 GKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3023

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L+ + ++ I+ GS H A ++S G +YTWG    G+L
Sbjct: 3024 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL 3083

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            G GD+  +  P  V AL   +V  V CGS     + L +  +V
Sbjct: 3084 GHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAV 3126


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+++  GE  +GRLG  ++   +  P+ +  
Sbjct: 2944 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISA 3003

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3004 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3060

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+++G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3061 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVAC 3120

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3121 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3169

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   +VEG L+ + +  ++ G+
Sbjct: 3170 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEG-LRGKKIVHVAVGA 3228

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3229 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285



 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 195/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3906 GQLGG-IEGAKVKVPTPTEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3956

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3957 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4016

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L GV V  +A G  H+A ++ SG+LFT+G G +G LGHG+ ++
Sbjct: 4017 GNRSPCDR--PR-VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 4073

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK V++L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4074 QLKPKLVDALQGHRVIDVACGSGDAQTL-------CLTD--DDMVWSWGDGDYGKLGRGG 4124

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4125 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4184

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4185 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4240

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4241 LQGKKINRVACGSAHTLAWSTSKPTNAG 4268



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3017 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3076

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+Y+WG   +G    G+  ++   L  KL   L G RV +VACG  +  T  ++  
Sbjct: 3077 TSSGELYSWGLGEYGRLGHGDNTTQ---LRPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3133

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3134 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3184

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3185 --SGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYA 3242

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3288



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 181/413 (43%), Gaps = 39/413 (9%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G ++ WG    G+LG      V  P   E L+ +    +  GE    A+T  G++Y  G+
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
               G   +G   S S      L +++  V + KVA   G  H   +S+ G+++++G+   
Sbjct: 3955 GAGGRLGIGGTESVS---TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4011

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN     +P+ +ESLRG++V  +A G  H+A I              G+LFTWG 
Sbjct: 4012 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT-----------ASGELFTWGK 4060

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +L P  V  L     +  +CG     T+ LT    V++ G   +G+L
Sbjct: 4061 GRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4120

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            G   +    + +    L    V  +  GS     LT  G+VYTWGK    +LG G     
Sbjct: 4121 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4180

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMP 623
              P  V+ L+ ++V ++  GS     +C  +   V             G  ++  + R+ 
Sbjct: 4181 RRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4238

Query: 624  FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT 676
               + KK N   CG     A ST K  NA   P +          YNHLQ+I+
Sbjct: 4239 AALQGKKINRVACGSAHTLAWSTSKPTNAGKMPAQ------VPMEYNHLQEIS 4285



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 145/303 (47%), Gaps = 27/303 (8%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK----VACGEWHTAI 383
           AL+ SGE+Y+WG  + G    G+    ++     L  T  G +  K    +ACG  ++A 
Sbjct: 460 ALSTSGEVYSWGCGDGGRLGHGDA---TYLEEPALITTFSGKQTGKQVVQIACGSTYSAA 516

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMV 441
           V+  G+L+T+G G +G LGHG+ ++V+ P  V +L+G KV  VACG     T A+ +   
Sbjct: 517 VTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTE--- 573

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    G++++WGD D G+LG    +    P  V +L D D V+  CG   +V LT 
Sbjct: 574 --------NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK 625

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+VYT G   + +LG+   +      +   L+ + V  I+ GS H   LT  G V++WG
Sbjct: 626 DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            N   Q        ++ P  +  L  + +  + CG   + A       SVG        R
Sbjct: 686 SNDKLQHFDTLFPNKKQPKALPGLNSKHIVGISCGPGQSFAWSSCSEWSVGQ-------R 738

Query: 622 MPF 624
           +PF
Sbjct: 739 VPF 741



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 123/233 (52%), Gaps = 20/233 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           V  I+ G+ ++A VT +GE++ WG G  GRLGH  + DV+ P LV  L G  V  V+C  
Sbjct: 504 VVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGS 563

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+ QT A+T++G++++WG  ++G   +G   S     P KL + L  + + KV CG   +
Sbjct: 564 GDAQTLAVTENGQVWSWGDGDYGK--LGRGGSDGCKTP-KLVEKLQDLDIVKVCCGSQFS 620

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             ++  GQ++T+G G    LGHG  ++V  PK ++SL+G KV  +A G  H  A+ D   
Sbjct: 621 VALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD--- 677

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCG 492
                    G++ +WG  DK  L H D     K  P  +  L     V  SCG
Sbjct: 678 --------EGEVHSWGSNDK--LQHFDTLFPNKKQPKALPGLNSKHIVGISCG 720



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 116/246 (47%), Gaps = 20/246 (8%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN----VQSVSCGEFQT 326
            +H   ++  GEV+ WG G  GRLGH     +  P L+   SG      V  ++CG   +
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYS 514

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIV 384
            A+T  GE+YTWG  N+G   +G   S     P  L   L G +V  VAC  G+  T  V
Sbjct: 515 AAVTADGELYTWGRGNYGR--LGHGSSEDVTTP-MLVTALKGQKVVDVACGSGDAQTLAV 571

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           + +GQ++++GDG +G LG G       PK VE L+ L +  V CG   + A+        
Sbjct: 572 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------ 625

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G+++TWG  D  RLGH   E    P  +  L     V  + G    + LT  G+
Sbjct: 626 -----DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGE 680

Query: 505 VYTMGS 510
           V++ GS
Sbjct: 681 VHSWGS 686



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 34/218 (15%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D   P L+ +     V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 541 DVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 600

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           LVE L  +++  V CG   + ALTK G++YTWG  +     HG D         H    K
Sbjct: 601 LVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD--------EHVRYPK 652

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT----FGVLGHGNLQNVSQPKEVES 417
           L D+L G +V  +A G  H   ++  G++ ++G       F  L      N  QPK +  
Sbjct: 653 LLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL----FPNKKQPKALPG 708

Query: 418 LRGLKVKSVACGP-----------WHTAAIVDIMVDRC 444
           L    +  ++CGP           W     V  +VD C
Sbjct: 709 LNSKHIVGISCGPGQSFAWSSCSEWSVGQRVPFVVDVC 746



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR++    GS   +   +  D M+W  G   GD G    G     K      +P  ++
Sbjct: 4084 QGHRVIDVACGSGDAQTLCLTDDDMVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4135

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 4136 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4195

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G ++++VACG
Sbjct: 4196 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACG 4252

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4253 SAHTLAWSTS 4262



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2922 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKIYAC 2978

Query: 394  GDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G      Q P+++ +L    VK VA   G  H  A+            + 
Sbjct: 2979 GEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALT-----------VD 3027

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G++Y+ G 
Sbjct: 3028 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3087

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + + + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3088 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3145

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3146 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3182



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 10/122 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LD+  +  G++ +  +TK+
Sbjct: 577 VWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDIVKVCCGSQFSVALTKD 626

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH  +  V  PKL++ L G  V  ++ G     ALT  GE+++WG 
Sbjct: 627 GQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS 686

Query: 341 NN 342
           N+
Sbjct: 687 ND 688



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3894 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 3944

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3945 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4002

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  I++G  H A +T+ G ++TWGK
Sbjct: 4003 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGVEVVD-IAAGGAHSACITASGELFTWGK 4060

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG GDS+++  P  V+AL+  +V  V CGS     +CL
Sbjct: 4061 GRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4103



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLF-----------DTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            HG ++VG  R+    L    F            T  G    K + G    A + T  ++F
Sbjct: 2867 HGLNIVGRIRADEEDLATVPFLASDNEEEDDEKTAAGSLARKKSSGLESAASIRT--KVF 2924

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2925 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2973

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  ++ L ++    V    G    + LT  GKV++ 
Sbjct: 2974 KIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3033

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +Y+WG    G+L
Sbjct: 3034 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRL 3093

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3094 GHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3130



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 14/121 (11%)

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK-GISSGSY 546
           Q  C   + + L+  G VYT          N K+   +  ++ G    + VK        
Sbjct: 406 QIVCSEKVFLILSRSGAVYTQ---------NYKSTTLAPMLIHGLSSRKIVKLAAHPDGQ 456

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR----DRQVESVVCGSSITAA 602
           H   L++ G VY+WG    G+LG GD+   E P  +         +QV  + CGS+ +AA
Sbjct: 457 HFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAA 516

Query: 603 I 603
           +
Sbjct: 517 V 517


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 181/353 (51%), Gaps = 21/353 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3045

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3102

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+++G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3163 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIIHVAVGA 3270

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS
Sbjct: 3271 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3323



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3968 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4018

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4078

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  +A G  H+A ++ +G L+T+G G +G LGHG+ ++
Sbjct: 4079 GNRSPCDR--PR-VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSED 4135

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4136 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4186

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4247 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4302

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4303 LQGKKINRVACGSAHTLAWSTSKPANAG 4330



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 20/319 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3021 GEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + A+T SGE+Y+WG   +G    G+ 
Sbjct: 3081 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3140

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3141 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3197

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGTD 3246

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     +  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3247 VHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTL 3306

Query: 529  VEGKLKEEFVKGISSGSYH 547
            V+G L+ + +  ++ GS H
Sbjct: 3307 VQG-LEGQKITRVACGSSH 3324



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 217/496 (43%), Gaps = 89/496 (17%)

Query: 158 SSSSQIQNLSNIITPSSPHMETENFMKWELNYADTRCPKN----------ESHRLVTP-- 205
           ++  ++Q LS  ++P+      ENF+++ +   D     +             RL TP  
Sbjct: 356 NTEEELQMLSYPLSPN------ENFLRYLILPQDNELAIDLRQTAVVIMAHLDRLATPCM 409

Query: 206 -TYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDV 264
             + S     K  L++V+ WG  ++G      V G             P   E    L V
Sbjct: 410 PPHCSSPTSHKGSLQEVIAWG--LIGWKYYANVSG-------------PIQCEGLASLGV 454

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE- 323
             I+   K   ++++ G V+              N D+  P+LV+ L+  N+  ++    
Sbjct: 455 TQIACAEKRFLILSRNGRVYT----------QAYNSDILGPQLVQSLASRNIVKIAAHSD 504

Query: 324 -FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDGVRVSK----VA 375
                AL  +GE+++WG  + G      R      +P    K+   L G +  K    +A
Sbjct: 505 GHHYLALAATGEVFSWGCGDGG------RLGHGDTVPLEEPKMISALSGKQAGKHVVHIA 558

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHT 433
           CG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V  L+GLKV  V+CG     T
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQT 618

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
            A+ +            G++++WGD D G+LG    +    P  + +L D D V+ SCG 
Sbjct: 619 LAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGS 667

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLT 552
             +V LT  G+VY+ G   + +LG+   +  R   ++EG L+ E V  + +GS H   LT
Sbjct: 668 QFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGEKVIDVVAGSTHCLALT 726

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
               VY+WG N   Q        +  PT +  L  + +  + CG + + A          
Sbjct: 727 EDSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSFA---------- 776

Query: 613 DQSSCSQ----CRMPF 624
             SSCS+     R+PF
Sbjct: 777 -WSSCSEWSIGLRVPF 791



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 146/284 (51%), Gaps = 26/284 (9%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WGEG          DG +  + ++++   P+L+E+     +++I+ G+ H+A +T  
Sbjct: 3072 VFSWGEGD---------DGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYTW 338
            GE++ WG G+ GRLGH  N     PK+V+ L G  V  V+CG  + QT ALT  G +++W
Sbjct: 3122 GELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3181

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G  + G   +G   S    +P+ + + L+G  V ++ CG   +  ++ SG ++T+G G +
Sbjct: 3182 GDGDFGK--LGRGGSEGCNIPQNI-ERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
              LGHG   +V +P+ VE LRG K+  VA G  H  A+ D            G+++ WGD
Sbjct: 3239 FRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDT-----------GQVYAWGD 3287

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
             D G+ G+        PT V  L      + +CG   +V  T +
Sbjct: 3288 NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWTTM 3331



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 159/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3956 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4012

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G L+TWG    GRLGH D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD 4132

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4133 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4192

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4193 PMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4252

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4253 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4310

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P +          YNHLQ+I
Sbjct: 4311 VACGSAHTLAWSTSKPANAGKLPTQ------VPMEYNHLQEI 4346



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2964 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 3020

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3021 GEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-----------TVD 3069

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G++Y+ G 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3129

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3187

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3188 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  ++S   + V  +  G++ +  +TK 
Sbjct: 4171 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDSLTGVGVVKVECGSQFSVALTKS 4220

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG 
Sbjct: 4221 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4280

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4281 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4324



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  +++  VSCG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 651 LIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  V  G  H   ++   +++++G        H +   +++P +  +L GL
Sbjct: 703 LLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSND--QCQHFDTLRITKP-DPTALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 796



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  ++G  R+    L    F   D           G  V K   G    A + T  ++F
Sbjct: 2909 HGLSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKTSGLESVATIRT--KVF 2966

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2967 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV-----------TVEG 3015

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GKV++ 
Sbjct: 3016 KVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 3075

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +Y+WG    G+L
Sbjct: 3076 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRL 3135

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3136 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
           +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 18  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 77

Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 78  LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 134

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 135 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 194

Query: 429 GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 195 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 243

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
            Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 244 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 302

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 303 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 1000 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 1050

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 1051 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGH 1110

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 1111 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 1167

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 1168 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 1218

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1278

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 1279 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 1334

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 1335 LQGKKVNRVACGSAHTLAWSTSKPASAG 1362



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
           G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 53  GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 112

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 113 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 172

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
            ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 173 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 229

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
           + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 230 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 278

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 279 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 338

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
           V+G L+ + +  ++ GS H    T+
Sbjct: 339 VQG-LEGQKITRVACGSSHSVAWTT 362



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 160/408 (39%), Gaps = 69/408 (16%)

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            T +   SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+
Sbjct: 982  TLSAGGSGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVT 1038

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------- 435
              G+L+  G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A        
Sbjct: 1039 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 1098

Query: 436  -------------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKG 462
                                           +VD+      S  +   G L+TWG    G
Sbjct: 1099 SWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            RLGH D E +L P  V  L     +  +CG     T+ LT    V++ G   +G+LG   
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218

Query: 521  AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +    + +    L    V  +  GS     LT  G+VYTWGK    +LG G       P 
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1278

Query: 581  FVEALRDRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFR 627
             V+ L+ ++V ++  GS     +C  +   V             G  ++  + R+    +
Sbjct: 1279 QVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 1336

Query: 628  RKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
             KK N   CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 1337 GKKVNRVACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 1378



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 20/247 (8%)

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLK 422
           +TL  + V +VA G      V+  G++++ G+ T G LG G +   V  P+++ +L    
Sbjct: 23  ETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYV 82

Query: 423 VKSVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
           VK VA   G  H  A+            + GK+F+WG+ D G+LGH        P  +  
Sbjct: 83  VKKVAVHSGGRHATALT-----------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 131

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
           L        +CG   +  LT  G++YT G   +G+LG+     + K + + V+ G    +
Sbjct: 132 LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 191

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
              G  S       LT  G V++WG    G+LG G S+    P  +E L  + V  + CG
Sbjct: 192 VACG--SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 249

Query: 597 SSITAAI 603
           +  + A+
Sbjct: 250 AQFSLAL 256



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 1162 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 1213

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 1214 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 1267

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 1268 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 1325

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 1326 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 1356



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 7/152 (4%)

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G  DK +LG + G +  +P+    L   + VQ + G      +T  GKVY+ G A +G+L
Sbjct: 1   GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60

Query: 517 GNPKAK-----DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G   +       R IT +   + ++    + SG  H   LT  G V++WG+  +G+LG  
Sbjct: 61  GLGMSSGTVPIPRQITALSSYVVKKVA--VHSGGRHATALTVDGKVFSWGEGDDGKLGHF 118

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                + P  +EAL+ +++  + CGSS +AA+
Sbjct: 119 SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 150



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 14/200 (7%)

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HV 467
           +  P   E+L  L V  VA G     A+            + GK+++ G+A  GRLG  +
Sbjct: 16  IKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEGKVYSCGEATNGRLGLGM 64

Query: 468 DGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
                 +P  +T L  +    V    G      LT  GKV++ G    G+LG+    +  
Sbjct: 65  SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 124

Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
              +   LK + ++ I+ GS H A LTS G +YTWG    G+LG GD+  +  P  V+ L
Sbjct: 125 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 184

Query: 586 RDRQVESVVCGSSITAAICL 605
              +V  V CGS     + L
Sbjct: 185 LGHRVIQVACGSRDAQTLAL 204


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 192/399 (48%), Gaps = 48/399 (12%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 2623 DVFLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 2669

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 2670 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2729

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 2730 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2786

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKV-------KSVACGPWHTAAIVDIMVDRCKSNAI 449
             +G LG GN  N   P+ V +L G ++        SVACG  HT A+          +  
Sbjct: 2787 DYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV----------STD 2836

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G
Sbjct: 2837 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2896

Query: 510  SAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
                  +G P+ + R+      + V+ G + E+    ++ G+ H   L S G VY WG N
Sbjct: 2897 Q--DRLIGLPEGRARNHNRPQQVPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSN 2950

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            + GQLGLG +     PT V  L+ + +  +  G   +AA
Sbjct: 2951 SEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 2989



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 157/334 (47%), Gaps = 35/334 (10%)

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H+  +T+ GEVF WG+G  G+LGH  +     P+ +E L G  V  +SCG   +  +T  
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 2777

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK-------VACGEWHTAIVS 385
            G+++T+G+ ++G   +G   ++   LP ++   L+G ++ +       VACG  HT  VS
Sbjct: 2778 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQAWNKSYSVACGLNHTLAVS 2834

Query: 386  TSGQL-FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            T G + + +GDG +G LG GN    S P++V+ L G+ +K VACG   + A+        
Sbjct: 2835 TDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK------ 2888

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                  G ++T+G      L          P  V  L        + G   T+ L   G 
Sbjct: 2889 -----DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGD 2943

Query: 505  VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYT 559
            VY  GS   GQLG    N   +   +TV++GK     ++ IS+G  H A  T+       
Sbjct: 2944 VYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----NIRQISAGRCHSAAWTAPPVPPRA 2999

Query: 560  WGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
             G +   QLGL D+     P    ALR+  + +V
Sbjct: 3000 PGVSVPLQLGLPDA----VPPQYGALREVSIHTV 3029



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 141/282 (50%), Gaps = 30/282 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 2623 DVFLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 2676

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 2725

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 2726 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 2785

Query: 511  AVHGQLG-----NPKAKDRSITVVEG-KLKEEFVKGISSG---SYHVAVLTSGGSVYTWG 561
              +G+LG     N K  +R +T +EG ++ + + K  S     ++ +AV T G  V+ +G
Sbjct: 2786 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFG 2844

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 2845 DGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2886



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 449  IGGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +GGK  +F WG    G+L    G   ++P            Q  CG+  T  +   G V 
Sbjct: 2618 LGGKCDVFLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQ--QVICGQNCTFVIQANGTVL 2674

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI--SSGSY-HVAVLTSGGSVYTWGKN 563
              G   +G+LG   + D  +  V   L+   V  +  S GS  H   LT  G V++WG  
Sbjct: 2675 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2734

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G+S  +  P  +EAL+  +V  + CG   +A +
Sbjct: 2735 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 2774



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G N++ +S G 
Sbjct: 2925 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGR 2984

Query: 324  FQTCALT 330
              + A T
Sbjct: 2985 CHSAAWT 2991


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 179/358 (50%), Gaps = 24/358 (6%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNMDVSCPKLV 308
            P   +S  +L    +  G +    VT  G+V+  G  + GRLG    +  N  V  P+LV
Sbjct: 3568 PLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLV 3627

Query: 309  ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            + L+ I   +V+ G     AL+ +GE+Y WG  + G   +G R + S     +L  +L  
Sbjct: 3628 QGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHS---KPQLVQSLSD 3684

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
              +  +ACG +H+A +S  G L+T+G G +G LGHG+ ++   PK V+ L    V  VAC
Sbjct: 3685 KCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVAC 3744

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G      +       C ++     +++WGD D G+LGH   E   LP  +  L     +Q
Sbjct: 3745 GSGDAQTM-------CVTS--DDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQ 3795

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSG 544
              CG   +V L+  G +YT G   + +LG+  +    K + ++ ++GK   +F    S+G
Sbjct: 3796 IDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQF----STG 3851

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            S HV  LT  G VY WG N  GQLG G +     P  + AL+ ++++ V CGS+ + A
Sbjct: 3852 SLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 181/387 (46%), Gaps = 30/387 (7%)

Query: 221  VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            V +WG   +G LGG  G  V               P   E+   L    I  G+K   +V
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKR-------------PTFNEALTALKPIEIVGGSKSLFIV 2641

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEI 335
            + EG+VF  G+   GRLG      VS P+ +  LS   +++V+   G     AL+  G++
Sbjct: 2642 SNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKV 2701

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
             +WG    G   +G     +   P KL D+L   RV  +ACG  H+A +++ G+L+T+G 
Sbjct: 2702 LSWGDGEDGK--LGHGDILTLDTP-KLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQ 2758

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G LGH +  +   PK V+   G  +  VACG      +    +D        G +++
Sbjct: 2759 GQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLA---LDS------EGNVYS 2809

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD D G+LG    +    P  V RLV    VQ  CG   +V LT  G+V+T G   + +
Sbjct: 2810 WGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYR 2869

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LG  + +      +  +LK   +  I+ G+ H   +++ G VY WG N +GQ G G +  
Sbjct: 2870 LGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNA 2929

Query: 576  RETPTFVEALRDRQVESVVCGSSITAA 602
             + P  V    + ++  V CGSS + A
Sbjct: 2930 NQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 14/318 (4%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WG    G+L    +  V  P   + LS +    V  GE    A+T  G++Y  G+  
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 343  HGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
             G   +G    ++ ++   +L   L+ +    V  G  H   +ST+G+++ +GDG  G L
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKL 3665

Query: 402  GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
            G GN    S+P+ V+SL    +  +ACG +H+AAI           +  G L+TWG    
Sbjct: 3666 GLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAI-----------SRYGHLYTWGKGRY 3714

Query: 462  GRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNP 519
            GRLGH D E  L P  V  L+++  V+ +CG     T+ +T    V++ G   +G+LG+ 
Sbjct: 3715 GRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHN 3774

Query: 520  KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
             ++   +      L  + +  I  GS     L++ G++YTWGK    +LG G S+    P
Sbjct: 3775 ISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKP 3834

Query: 580  TFVEALRDRQVESVVCGS 597
              V  L+ +++     GS
Sbjct: 3835 KPVSGLQGKKIVQFSTGS 3852



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 143/328 (43%), Gaps = 24/328 (7%)

Query: 277  VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
            V  E  V+ WG    G+LG      V  P   E L+ +    +  G      ++  G+++
Sbjct: 2589 VDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVF 2648

Query: 337  TWGHNN---HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLF 391
              G ++    G    G+  S     PR++   L    +  VA   G  H   +S  G++ 
Sbjct: 2649 VCGDSSGGRLGIPFCGKVSS-----PRQI-PGLSQFVIKTVAVHSGGKHAMALSLDGKVL 2702

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            ++GDG  G LGHG++  +  PK ++SL   +V  +ACG  H+AAI              G
Sbjct: 2703 SWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITS-----------DG 2751

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMG 509
            +L+TWG    GRLGH D   +  P  V   V  +  Q +CG     T+ L   G VY+ G
Sbjct: 2752 ELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWG 2811

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
                G+LG   +          +L    V  I  G+     LT+ G V+TWGK    +LG
Sbjct: 2812 DGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLG 2871

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGS 597
            LG  +    PT V  L+   ++ +  G+
Sbjct: 2872 LGRGEHVRRPTLVNQLKLVTIDHIAVGT 2899



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 28/278 (10%)

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFD-TLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +Y WG N+ G  L G   S+   + R  F+  L  ++  ++  G     IVS  G++F  
Sbjct: 2595 VYVWGLNDKG-QLGGLNGSK---VKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVC 2650

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGG 451
            GD + G LG      VS P+++  L    +K+VA   G  H  A+           ++ G
Sbjct: 2651 GDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMAL-----------SLDG 2699

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            K+ +WGD + G+LGH D      P  +  L+       +CG   +  +T  G++YT G  
Sbjct: 2700 KVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQG 2759

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFV-KGIS-----SGSYHVAVLTSGGSVYTWGKNAN 565
             +G+LG+       ++    KL +EFV K I+     S       L S G+VY+WG    
Sbjct: 2760 QYGRLGHSD----EVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDF 2815

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG G S    TP  VE L   +V  + CG+  + A+
Sbjct: 2816 GKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVAL 2853



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 15/232 (6%)

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +W+         ++ +G    G L   +   V +P   +SL  LK   V  G     A+ 
Sbjct: 3534 DWNMTWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVT 3593

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGR 493
                         GK++  G  + GRLG    +      + P  V  L +   V  + G 
Sbjct: 3594 SY-----------GKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGG 3642

Query: 494  MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
               + L+  G+VY  G    G+LG       S   +   L ++ +  I+ G +H A ++ 
Sbjct: 3643 RHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISR 3702

Query: 554  GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             G +YTWGK   G+LG GD ++   P  V+ L +  V  V CGS     +C+
Sbjct: 3703 YGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCV 3754



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 25/210 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ + +   L V  +S G    A VT++G+++ WG     ++ H  N     P+LV+ +S
Sbjct: 536 PEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWG-----KILHSSNC-CYTPELVKSIS 589

Query: 313 GINVQSVSCGEF--QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             +V  VSCG     T AL++ G ++++ + N  +D   + +S +      +FD      
Sbjct: 590 EWHVSKVSCGSSINNTLALSREGYVFSFEYRN--SDRGCDDKSLNVIPSMIVFD----YE 643

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +  + C     A++  +  +FT+G G   +LGH N   V++PKEV+ L G +V S++   
Sbjct: 644 IVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLAD 703

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            +  A+ D            G+++ WG  D
Sbjct: 704 DYILALTDT-----------GQVYCWGQLD 722



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G  +G  +  S           LP  +ES     +  I  G++ +  ++ 
Sbjct: 3759 NVWSWGDGDYG-KLGHNISESCK---------LPCKIESLSGKGIIQIDCGSQFSVALSA 3808

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G ++ WG+G   RLGH  +  V  PK V  L G  +   S G     ALT  GE+Y WG
Sbjct: 3809 NGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWG 3868

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             N+ G   +G+  +     PR +   L G R+ +V+CG  H+
Sbjct: 3869 DNDEGQ--LGDGTAHPIARPRPI-AALKGKRIQQVSCGSAHS 3907



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 133/323 (41%), Gaps = 42/323 (13%)

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           K++  L  ++V+SV C   +   +T SG ++     ++  D +     +   +P K  D 
Sbjct: 443 KVILTLERLHVESVVCSRNEILVVTTSGTLH---FISYSIDSLNFEEKQMMNVPMKSVDV 499

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVK 424
            D   ++           V+  G+++++G   FG LGHG    +   P+ + +   L V 
Sbjct: 500 YDETYLA-----------VTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVV 548

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            V+CG            D C +    GKL+ WG     ++ H        P  V  + ++
Sbjct: 549 MVSCGK-----------DFCAAVTEDGKLYMWG-----KILH-SSNCCYTPELVKSISEW 591

Query: 485 DFVQASCGRML--TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-VKGI 541
              + SCG  +  T+ L+  G V++       +  +    D+S+ V+   +  ++ +  I
Sbjct: 592 HVSKVSCGSSINNTLALSREGYVFSF----EYRNSDRGCDDKSLNVIPSMIVFDYEIVSI 647

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
              +   AV+    +V+TWG+  N  LG  +S     P  V+ L  +QV S+        
Sbjct: 648 YCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYIL 707

Query: 602 AICLHKSISVG---DQSSCSQCR 621
           A+     +      D  + +QCR
Sbjct: 708 ALTDTGQVYCWGQLDNENTTQCR 730


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 192/402 (47%), Gaps = 51/402 (12%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 4000 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 4046

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 4047 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4106

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 4107 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4163

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKS----------VACGPWHTAAIVDIMVDRCKS 446
             +G LG GN  N   P+ V +L G ++            VACG  HT A+          
Sbjct: 4164 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAV---------- 4213

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +A G  ++ +GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VY
Sbjct: 4214 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVY 4273

Query: 507  TMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            T G      +G P+ + R+      I V+ G + E+    ++ G+ H   L S G VY W
Sbjct: 4274 TFGQ--DRLIGLPEGRARNHNRPQQIPVLAGVVIED----VAVGAEHTLALASTGDVYAW 4327

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G N+ GQLGLG +     PT V  L+ + V  +  G   +AA
Sbjct: 4328 GSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4369



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 30/353 (8%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T  ++  G +
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSV 422

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T G++F++G
Sbjct: 423 RACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 481

Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +            G+L
Sbjct: 482 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----------DGEL 530

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ V++ G   
Sbjct: 531 YTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGGD 588

Query: 513 HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY WG  A   L
Sbjct: 589 NGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 642

Query: 569 GLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           G G S+     P  +E L   ++  +  G S   A+     +     +S  QC
Sbjct: 643 GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC 695



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 387 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 444

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 445 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 502

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 503 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 560

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 561 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 610

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 611 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 665

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 666 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 725

Query: 598 SITAA 602
           S + A
Sbjct: 726 SHSLA 730



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 155/336 (46%), Gaps = 38/336 (11%)

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H+  +T+ GEVF WG+G  G+LGH  +     P+ +E L G  V  +SCG   +  +T  
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4154

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS----------KVACGEWHTA 382
            G+++T+G+ ++G   +G   ++   LP ++   L+G ++           +VACG  HT 
Sbjct: 4155 GKLFTFGNGDYGRLGLGNTSNKK--LPERV-TALEGYQIGQARNNTLFFLQVACGLNHTL 4211

Query: 383  IVSTSGQL-FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             VS  G + + +GDG +G LG GN    S P++V+ L G+ +K VACG   + A+     
Sbjct: 4212 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK--- 4268

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                     G ++T+G      L          P  +  L        + G   T+ L  
Sbjct: 4269 --------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAS 4320

Query: 502  LGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-S 556
             G VY  GS   GQLG    N   +   +TV++GK     V+ IS+G  H A  T+    
Sbjct: 4321 TGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----NVRQISAGRCHSAAWTAPPVP 4376

Query: 557  VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
                G +   QLGL D+     P    ALR+  + +
Sbjct: 4377 PRAPGVSVPLQLGLPDT----VPPQYGALREVSIHT 4408



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 33/285 (11%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG   + E   R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 4000 DVYLWGAGRHGQ--LAEA-GRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 4053

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 4102

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 4103 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4162

Query: 511  AVHGQLG-----NPKAKDRSITVVEG------KLKEEFVKGISSGSYH-VAVLTSGGSVY 558
              +G+LG     N K  +R +T +EG      +    F   ++ G  H +AV   G  V+
Sbjct: 4163 GDYGRLGLGNTSNKKLPER-VTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVW 4221

Query: 559  TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             +G    G+LGLG+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 4222 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4266



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 476 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 583

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 584 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 639

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 640 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 687

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 688 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 736



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 529 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 575

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 576 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 635

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 636 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 691

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 692 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 738



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 68/279 (24%)

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  ++++ E+Y WG N+    + G   ++   L  KL  +    +   +  G++ T ++S
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAPSFSDAQT--IEAGQYCTFVIS 417

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           T G +   G G++G LG G+  N S  K++       +K V+                  
Sbjct: 418 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS------------------ 459

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                        + KG  GH                             T+  T  G+V
Sbjct: 460 -------------SSKGSDGH-----------------------------TLAFTTEGEV 477

Query: 506 YTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           ++ G   +G+LG+  +  +    +++G L+ + V  +S+G  H A +T  G +YTWG+  
Sbjct: 478 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 537

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LG GDS  R  PT V+ + +  V  V CGSS T A+
Sbjct: 538 FGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 574



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 449  IGGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +GGK  ++ WG    G+L    G   ++P            Q  CG+  T  +   G V 
Sbjct: 3995 LGGKCDVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQ--QVICGQNCTFVIQANGTVL 4051

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI--SSGSY-HVAVLTSGGSVYTWGKN 563
              G   +G+LG   + D  +  V   L+   V  +  S GS  H   LT  G V++WG  
Sbjct: 4052 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4111

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G+S  +  P  +EAL+  +V  + CG   +A +
Sbjct: 4112 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 4151



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 4305 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 4364

Query: 324  FQTCALT 330
              + A T
Sbjct: 4365 CHSAAWT 4371


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 179/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     + D L+P +L       + ++  GA H  A    E +V+ WG G  GRLGH
Sbjct: 43  DGQLGHGDAE-DRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGH 101

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + DV  P+ V+ L G+ ++ ++CG+    A+T +G++ +WG N +G   +G   +   
Sbjct: 102 GNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQ--LGLGTTEDS 159

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+K+    +GV V  +A G  HTA V+  G L+ +G G +G LG G+  +   P++V 
Sbjct: 160 LLPQKI-QAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVS 218

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+ G K+  VACG  HT  + D            G L+T+G +  G+LGH D E  L+P 
Sbjct: 219 SVEGEKMVLVACGWRHTITVSD-----------SGNLYTYGWSKYGQLGHGDFEDHLVPH 267

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L D    Q S G   T+ LT  GK+Y  G    GQ+G     D    V     +++
Sbjct: 268 KLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQ 327

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            +  ++ G  H   L+   +V++WG+  +GQLG G+  +R TP  ++AL
Sbjct: 328 KISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 376



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 185/365 (50%), Gaps = 23/365 (6%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCP 305
           V A +P      V+L    +S GA H+ AL+T  G V C WG G+DG+LGH    D   P
Sbjct: 4   VMAAVPDSPPQTVVL----VSAGASHSVALLT--GNVLCSWGRGEDGQLGHGDAEDRLVP 57

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
            ++       + SV CG   T A ++   ++Y+WG  + G   +G   S   + P+ +  
Sbjct: 58  TVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGR--LGHGNSSDVFTPQPV-K 114

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            L G+++ ++ACG+ H   V+ +GQ+ ++G    G LG G  ++   P+++++  G+ VK
Sbjct: 115 ALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK 174

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            +A G  HTAA+ +            G L+ WG    G LG  D   +LLP  V+ +   
Sbjct: 175 MIAAGAEHTAAVTE-----------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
             V  +CG   T+ ++  G +YT G + +GQLG+   +D  +      LK+  +  IS G
Sbjct: 224 KMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGG 283

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   LTS G +Y WG N  GQ+G+G++ +  +P  V    D+++  V CG   T A+ 
Sbjct: 284 WRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALS 343

Query: 605 LHKSI 609
             K++
Sbjct: 344 EKKNV 348


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 20  ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 135

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 189

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G  H   LTS G +Y WG N 
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 184/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 30  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 88

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 89  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 149 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 205

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 206 LGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 254

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374

Query: 583 EAL 585
           EAL
Sbjct: 375 EAL 377



 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 192 TRCPKNESHRLVTPTYGSP-LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H++V+ T G+   +       +V  WG G    D G    G+ S      D 
Sbjct: 59  TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG----DFGRLGHGNSS------DL 108

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             P  +++   + ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 168

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   T A+T+ G++Y WG   +G   +G+R  R   +P ++  +  G +
Sbjct: 169 FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL--VPERV-TSAGGEK 225

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +S VACG  HT  VS SG L+TYG   +G LGHG+L++   P ++E+L    +  ++ G 
Sbjct: 226 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 285

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  +   +  P  V    D   VQ S
Sbjct: 286 RHTMALTS-----------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS 334

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +T    V+  G   +GQLG  ++ DR+ 
Sbjct: 335 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNF 370



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L    +  ++ G+ H V
Sbjct: 21  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 80

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 81  AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140

Query: 609 I 609
           +
Sbjct: 141 V 141



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+++  GE  +GRLG  ++   +  P+ +  
Sbjct: 2753 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITA 2812

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 2813 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKA 2869

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+++G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 2870 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVAC 2929

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 2930 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2978

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   +VEG L+ + +  ++ G+
Sbjct: 2979 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGA 3037

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3038 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094



 Score =  154 bits (389), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 2826 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+Y+WG   +G    G+  ++   L  KL   L G RV +VACG  +  T  ++  
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGDNTTQ---LRPKLVKVLLGHRVIQVACGSRDAQTLALTDE 2942

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 2943 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 2993

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 2994 --SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3051

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3097



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 196/405 (48%), Gaps = 48/405 (11%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3768 GQLGG-IEGAKVKVPTPTEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3818

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3819 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3878

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L GV V  +A G  H+A ++ SG+LFT+G G +G LGHG+ ++
Sbjct: 3879 GNRSPCDR--PR-VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 3935

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK V++L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 3936 QLKPKLVDALQGHRVIDVACGSGDAQTL-------CLTD--DDMVWSWGDGDYGKLGRGG 3986

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +    P  +  L     ++  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3987 SDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4046

Query: 525  SITVVEGKLKEEFVKGISSGSYH---------VAVLTSG--------GSVYTWGKNANGQ 567
             +  ++GK     V  I++GS H         + V   G        G VYTWG N  GQ
Sbjct: 4047 QVQGLQGKK----VIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQ 4102

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
            LG G +   + P  V AL+ +++  V CGS+ T +    K  + G
Sbjct: 4103 LGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTSKPTNAG 4147



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 17/324 (5%)

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T   +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G+IY 
Sbjct: 2727 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 2786

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             G   +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F++G+
Sbjct: 2787 CGEATNGRLGLG-LSSGTIPIPRQI-TALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 2844

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G  G LGH +  N  +P+ +E+L+  +++ +ACG  H+AAI              G+L++
Sbjct: 2845 GDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITS-----------SGELYS 2893

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVH 513
            WG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    
Sbjct: 2894 WGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2953

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            G+LG   ++  +I     +L  + V  I  G+     LT  G V+TWGK    +LG G  
Sbjct: 2954 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD 3013

Query: 574  QERETPTFVEALRDRQVESVVCGS 597
                 P  VE LR +++  V  G+
Sbjct: 3014 VHVRKPQMVEGLRGKKIVHVAVGA 3037



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 178/428 (41%), Gaps = 52/428 (12%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G ++ WG    G+LG      V  P   E L+ +    +  GE    A+T  G++Y  G+
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
               G   +G   S S      L +++  V + KVA   G  H   +S+ G+++++G+   
Sbjct: 3817 GAGGRLGIGGTESVS---TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 3873

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN     +P+ +ESLRG++V  +A G  H+A I              G+LFTWG 
Sbjct: 3874 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT-----------ASGELFTWGK 3922

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +L P  V  L     +  +CG     T+ LT    V++ G   +G+L
Sbjct: 3923 GRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 3982

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            G   +      +    L    V  +  GS     LT  G+VYTWGK    +LG G     
Sbjct: 3983 GRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4042

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV------------------------- 611
              P  V+ L+ ++V ++  GS           I V                         
Sbjct: 4043 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQ 4102

Query: 612  ---GDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTC 668
               G  ++  + R+    + KK N   CG     + ST K  NA   P +          
Sbjct: 4103 LGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTSKPTNAGKLPAQ------VPME 4156

Query: 669  YNHLQKIT 676
            YNHLQ+I+
Sbjct: 4157 YNHLQEIS 4164



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 53/427 (12%)

Query: 205 PTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDV 264
           P   SP    K  L++V+ WG  +LG  +   V+G             P   +S   L V
Sbjct: 373 PNCNSP-TSHKGTLQEVIAWG--LLGWKLYANVNG-------------PIHCKSLSSLGV 416

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
             I    K   +++  G V+     K   L   +   +S  K+V+  +  + Q       
Sbjct: 417 TQIVCSEKGFLILSSSGAVYTQNY-KSTTLAPMLIHSLSSRKMVKLAAHPDGQ------- 468

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWHTAI 383
              AL+ +GE+++WG  + G    G+            F+    G  V  +ACG  ++A 
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAA 528

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMV 441
           ++  G+L+T+G G +G LGHG+ ++ + P  V +L+GLKV  VACG     T A+ +   
Sbjct: 529 ITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTE--- 585

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    G++++WGD D G+LG    +    P  V +L D D V+  CG   +V LT 
Sbjct: 586 --------NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK 637

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+VYT G   + +LG+   +      +   L+ + V  ++ GS H   LT  G V++WG
Sbjct: 638 DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 697

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ-- 619
            N   Q        ++ P  +  L  + +  + CG   + A            SSCS+  
Sbjct: 698 SNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFA-----------WSSCSEWS 746

Query: 620 --CRMPF 624
              R+PF
Sbjct: 747 VGLRVPF 753



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 98/218 (44%), Gaps = 34/218 (15%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D   P L+ +   L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 553 DQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 612

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           LVE L  +++  V CG   + ALTK G++YTWG  +     HG D         H    K
Sbjct: 613 LVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD--------EHVRFPK 664

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT----FGVLGHGNLQNVSQPKEVES 417
           L DTL G +V  VA G  H   ++  G++ ++G       F  L      N  QPK +  
Sbjct: 665 LLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTL----FSNKKQPKALPG 720

Query: 418 LRGLKVKSVACGP-----------WHTAAIVDIMVDRC 444
           L    +  ++CGP           W     V  +VD C
Sbjct: 721 LNSKHIVGISCGPGQSFAWSSCSEWSVGLRVPFVVDVC 758



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3756 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPT-EALATLRPVQLIGGEQTLFAVTADGKLY 3812

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + ++ VA         V+     C + +  G
Sbjct: 3813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVA---------VNSGGKHCLALSSEG 3863

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G+++T G  
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 3923

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  ++  SG      LT    V++WG    G+LG
Sbjct: 3924 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 3983

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   +TP  +++L    V  V CGS  + A+
Sbjct: 3984 RGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVAL 4017



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2731 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKIYAC 2787

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   +  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 2788 GEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALT-----------VD 2836

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G++Y+ G 
Sbjct: 2837 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGL 2896

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + + + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 2897 GEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 2954

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 2955 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2991



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 14/220 (6%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E+L  L V  VA G     A+            
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 2779

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
            + GK++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GKV
Sbjct: 2780 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 2839

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +Y+WG    
Sbjct: 2840 FSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEY 2899

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 2900 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 2939



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 3806

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3807 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 3864

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  I++G  H A +T+ G ++TWGK
Sbjct: 3865 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGVEVVD-IAAGGAHSACITASGELFTWGK 3922

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG GDS+++  P  V+AL+  +V  V CGS     +CL
Sbjct: 3923 GRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 3965


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 203/413 (49%), Gaps = 58/413 (14%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           K V  WG G  G        G  ++N       + KL +  ++    N S+    +  ++
Sbjct: 43  KTVYAWGYGNFG------QLGLANENNQYSPQEVEKLSDRNIIKVKANKSV----SMALS 92

Query: 279 KEGEVFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           ++G+V+ WG+ K G LGH    + ++  P+LVE L  I ++ +SCG F   A+++ GE+Y
Sbjct: 93  QDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELY 152

Query: 337 TWGHNNHG---------ADLVGERRSRSHW-------LPRKLFDTLDGVRVSKVACGEWH 380
           TWG+ +HG         ++ V  +R   ++       LP K+  +L+G++  +V+CG   
Sbjct: 153 TWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKV-QSLNGIKCKQVSCGGQF 211

Query: 381 TAIVSTSGQLFTYGDGTFGVLGH-----GNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           T +++ +G+++++G+   G LG+     GN     QPK++  L+   + ++ CG   +AA
Sbjct: 212 TVVLTENGEVYSFGNSMKGQLGYQSEETGNF----QPKKIPDLQ--NIINIDCGQQFSAA 265

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
           +           +  GK++TWG+ D G+LG+     +  P  VT       +  SCG   
Sbjct: 266 V-----------SSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNF 314

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
              L+  GK++T G    GQLG+    D      + + KE+ +K +  G  H A LT   
Sbjct: 315 IAALSNEGKLFTWGYGNDGQLGHSNRNDL-YAPKQIEFKEKIIK-VDCGGTHTAFLTQNN 372

Query: 556 SVYTWGKNANGQLGLGDSQE-----RETPTFVEALRDRQVESVVCGSSITAAI 603
            +Y +G+   GQLG+G++ E     R TP  VE  +  +V  V CG   T AI
Sbjct: 373 QLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAI 425



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 18/214 (8%)

Query: 233 IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
            G ++ G +     +     PK +    + ++ NI  G + +A V+  G+V+ WG    G
Sbjct: 224 FGNSMKGQLGYQSEETGNFQPKKIPD--LQNIINIDCGQQFSAAVSSSGKVYTWGNNDHG 281

Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           +LG+  ++  + P  V    G  + ++SCG+    AL+  G+++TWG+ N G   +G   
Sbjct: 282 QLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQ--LGHSN 339

Query: 353 SRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-- 409
               + P+++ F      ++ KV CG  HTA ++ + QL+ +G G  G LG G  +N+  
Sbjct: 340 RNDLYAPKQIEFKE----KIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIG--ENIES 393

Query: 410 -----SQPKEVESLRGLKVKSVACGPWHTAAIVD 438
                + PK VE  + +KV  V CG  +T AI +
Sbjct: 394 EAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 178/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     + D L+P +L       + ++  GA H  A    E +V+ WG G  GRLGH
Sbjct: 42  DGQLGHGDAE-DRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGH 100

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + DV  P+ V+ L G+ ++ ++CG+    A+T +GE+ +WG N +G   +G   +   
Sbjct: 101 GNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ--LGLGTTEDS 158

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+K+    + V V  +A G  HTA V+  G L+ +G G +G LG G+  +   P++V 
Sbjct: 159 LLPQKI-QAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVS 217

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+ G K+  VACG  HT  + D            G L+T+G +  G+LGH D E  L+P 
Sbjct: 218 SVEGEKMVLVACGWRHTITVSD-----------SGNLYTYGWSKYGQLGHGDFEDHLVPH 266

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L D    Q S G   T+ LT  GK+Y  G    GQ+G     D S        +++
Sbjct: 267 KVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQ 326

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            +  ++ G  H   L+   +V++WG+  +GQLG G+  +R TP  ++AL
Sbjct: 327 KISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 375



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 177/346 (51%), Gaps = 19/346 (5%)

Query: 267 ISLGAKHA-ALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           +S GA H+ AL+T  G V C WG G+DG+LGH    D   P ++       + SV CG  
Sbjct: 18  VSAGASHSVALLT--GNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGAD 75

Query: 325 QTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
            T A ++   ++Y+WG  + G   +G   S   + P+ +   L G+++ ++ACG+ H   
Sbjct: 76  HTTAYSEDELQVYSWGWGDFGR--LGHGNSSDVFTPQPV-KALQGLKIKQIACGDSHCLA 132

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           V+ +G++ ++G    G LG G  ++   P+++++   + VK +A G  HTAA+ +     
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE----- 187

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G L+ WG    G LG  D   +LLP  V+ +     V  +CG   T+ ++  G
Sbjct: 188 ------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSG 241

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +YT G + +GQLG+   +D  +      LK+  +  IS G  H   LTS G +Y WG N
Sbjct: 242 NLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWN 301

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             GQ+G+G++ +  +P  V    D+++  V CG   T A+   K++
Sbjct: 302 KFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNV 347



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 14/288 (4%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D   P+ +++   L ++ I+ G  H   VT  GEV  WG  ++G+LG     D   P+ +
Sbjct: 105 DVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKI 164

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           +    + V+ ++ G   T A+T+ G++Y WG   +G   +G+R  R   LP K+  +++G
Sbjct: 165 QAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL--LPEKV-SSVEG 221

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            ++  VACG  HT  VS SG L+TYG   +G LGHG+ ++   P +VE+L+   +  ++ 
Sbjct: 222 EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISG 281

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HT A+              GKL+ WG    G++G  + +    P  V+   D    Q
Sbjct: 282 GWRHTMALTSE-----------GKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQ 330

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +CG   T+ L+    V++ G    GQLGN +  DR+  V+   L  +
Sbjct: 331 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSD 378



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
           P  T  +V        +   G  L +WG  + G+LGH D E +L+PT ++          
Sbjct: 11  PPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSV 70

Query: 490 SCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            CG   T   +    +VY+ G    G+LG+  + D         L+   +K I+ G  H 
Sbjct: 71  ICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC 130

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             +T  G V +WG+N NGQLGLG +++   P  ++A     V+ +  G+  TAA+
Sbjct: 131 LAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAV 185


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 198/413 (47%), Gaps = 45/413 (10%)

Query: 221 VMIWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           ++ WG    G LGG  G  V              LP   E+   L    +  G +    V
Sbjct: 583 ILGWGHNHRGQLGGVEGAKVK-------------LPMPCEALSALRPIQVVGGEQTLFAV 629

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCGEFQTCALTKSGEI 335
           T +G+V+  G G  GRLG      VSCP L+E L  + ++ V  + G     AL+  GE+
Sbjct: 630 TADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEV 689

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           Y+WG  + G   +G     S   PR + ++L G  V  VACG  H+A ++ SG+L+T+G 
Sbjct: 690 YSWGEGDDGK--LGHGNKSSCERPR-VIESLRGKEVVDVACGGAHSACITASGELYTWGK 746

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G +G LGHG+  +  +PK+VE+L G +V+ VACG    A  + +  D C        +++
Sbjct: 747 GRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGS-GDAQTLCVTDDDC--------VWS 797

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WGD D G+LG    +   +P  V  L     ++  CG   +V LT  G VYT G   + +
Sbjct: 798 WGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHR 857

Query: 516 LGNPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           LG+       + + +  ++GK     V  I+ GS H    T  G VYTWG N  GQLG G
Sbjct: 858 LGHGTDDHVRRPKRVAALQGKK----VICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDG 913

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC-RMP 623
                  P  V AL+ +++  V CGS+ T A       S  + S+   C RMP
Sbjct: 914 TVNAIHKPRLVAALQGKKINRVSCGSAHTVA------WSTCNPSTAGACGRMP 960



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 119/276 (43%), Gaps = 79/276 (28%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           +V  WGEG          DG +   NK+  +   P+++ES    +V +++ G  H+A +T
Sbjct: 688 EVYSWGEGD---------DGKLGHGNKSSCER--PRVIESLRGKEVVDVACGGAHSACIT 736

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQT---------- 326
             GE++ WG+G+ GRLGH  + D   PK VE LSG  V+ V+C  G+ QT          
Sbjct: 737 ASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVW 796

Query: 327 ------------------------------------------CALTKSGEIYTWGHNN-- 342
                                                      ALT SG +YTWG  +  
Sbjct: 797 SWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYH 856

Query: 343 ---HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              HG D         H    K    L G +V  +A G  H    + +G+++T+GD   G
Sbjct: 857 RLGHGTD--------DHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEG 908

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            LG G +  + +P+ V +L+G K+  V+CG  HT A
Sbjct: 909 QLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 145/335 (43%), Gaps = 41/335 (12%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG I  WGHN+ G   +G        LP    + L  +R  +V  GE     V+  G+++
Sbjct: 580 SGTILGWGHNHRGQ--LGGVEGAKVKLPMPC-EALSALRPIQVVGGEQTLFAVTADGKVY 636

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             G G  G LG G   +VS P  +ESL+ + +K V         +V+     C + +  G
Sbjct: 637 ATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKV---------VVNSGGKHCLALSAEG 687

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++++WG+ D G+LGH +      P  +  L   + V  +CG   +  +T  G++YT G  
Sbjct: 688 EVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKG 747

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS----------SGSYHVAVLTSGGSVYTWG 561
            +G+LG+  + D        +L+ + V+ +S          SG      +T    V++WG
Sbjct: 748 RYGRLGHGDSDD--------QLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWG 799

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV---GD----- 613
               G+LG G S   + P  V+ L+   V  V CGS  + A+    S+     GD     
Sbjct: 800 DGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLG 859

Query: 614 QSSCSQCRMP---FGFRRKKHNCYNCGLHFCSACS 645
             +    R P      + KK  C   G   C AC+
Sbjct: 860 HGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACT 894


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 187/393 (47%), Gaps = 30/393 (7%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            +D+   VM+WG   +  LGG  G  V              +P   ++   L   +I+ G+
Sbjct: 3091 QDLPCTVMVWGLNDKEQLGGLKGSKVK-------------VPTFSQTISRLRPIHIAGGS 3137

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCAL 329
            K   +V + G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     AL
Sbjct: 3138 KSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3197

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            T  G++++WG    G    G R +     PR L +TL   ++  VACG  H+A +S+ G+
Sbjct: 3198 TLDGKVFSWGEGEDGKLGHGNRTTLDK--PR-LVETLRSKKIRDVACGSSHSAAISSQGE 3254

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            L+T+G G +G LGHG+     +PK V +L G +V  VACG    A  + +  D       
Sbjct: 3255 LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGS-RDAQTLALTED------- 3306

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             G +F+WGD D G+LG    E    P  + RL     +Q  CG   ++ LT  G+V+T G
Sbjct: 3307 -GAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWG 3365

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               + +LG+   +          L+   V  ++ G+ H   +T  G VY WG N +GQ G
Sbjct: 3366 KGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3425

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             G++   + P  V  L    V  V CGSS + A
Sbjct: 3426 SGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 187/379 (49%), Gaps = 31/379 (8%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4247 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4297

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG       + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4298 GGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4357

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 4358 GNRMSYDR---PKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4414

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +P+ VE+L G +   +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4415 QLRPQLVEALLGYRAIDIACGSGDAQTL-------CIND--DDNVWSWGDGDYGKLGRGG 4465

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   LP  +  L     ++  CG   +V LT  G VYT G     +LG+       + +
Sbjct: 4466 SDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPK 4525

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     +  I++GS H    +  G VYTWG N  GQLG G     + P  V A
Sbjct: 4526 KVAALQGK----KIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAA 4581

Query: 585  LRDRQVESVVCGSSITAAI 603
            L+ + +  V CGS+ T A+
Sbjct: 4582 LQGKHIVKVTCGSAHTLAL 4600



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 159/312 (50%), Gaps = 30/312 (9%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T EGEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 4311 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4370

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G+NV  ++CG   + A+T SG + TWG   +G   +G   S     P +L + L G 
Sbjct: 4371 HLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-QLVEALLGY 4427

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4428 RAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4487

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFD 485
            CG   + A+        KS A+    +TWG  D  RLGH  VD  R+  P  V  L    
Sbjct: 4488 CGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKK 4534

Query: 486  FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGI 541
             +  + G +  V  +  G+VYT G    GQLG+       + R +  ++GK     VK +
Sbjct: 4535 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-V 4590

Query: 542  SSGSYHVAVLTS 553
            + GS H   L++
Sbjct: 4591 TCGSAHTLALST 4602



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 23/247 (9%)

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            T+  +R   +A G     IV  +G+++  G+GT G LG G   NV  P ++  L    VK
Sbjct: 3124 TISRLRPIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVK 3183

Query: 425  SVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTR 480
             VA   G  H  A+            + GK+F+WG+ + G+LGH  G R  L  P  V  
Sbjct: 3184 KVAVHSGGKHALALT-----------LDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVET 3230

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  ++  G++YT G   +G+LG+     + K + +  + G+   +
Sbjct: 3231 LRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQ 3290

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G+V++WG    G+LG G S+  +TP  +E L    V  + CG
Sbjct: 3291 VACG--SRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECG 3348

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 3349 AQFSLAL 3355



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 29/311 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS- 320
             VQ I        +++++G+++ W          ++    + P+L+E ++   + S++ 
Sbjct: 576 FQVQQIVCSESIVLILSEDGKLYNW----------RMFKPETEPQLLEEIAHETIVSIAS 625

Query: 321 -CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
            C      A+  +   Y+WG+        G+  +R+  +P K+  TL    V  V CG  
Sbjct: 626 HCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARA--VPTKI--TLLDRCVKAVFCGCS 681

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           ++A ++ SG L+T+G GT+  LGHGN  +   P  V +L   ++  VA G     ++   
Sbjct: 682 YSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSL--- 738

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
               C ++   G ++ WGDAD G+LG+ +    + P  V  L     V A  G   ++ L
Sbjct: 739 ----CLTSE--GHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQRVFA--GAQFSMAL 790

Query: 500 TGLGKVYTMGSA--VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           T  G++Y+ G A  +  QL    A+  S+  +   L+ + +  ++ G  H   L+S G V
Sbjct: 791 TTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEV 850

Query: 558 YTWGKNANGQL 568
           + WG+N + Q+
Sbjct: 851 FGWGRNDSQQI 861



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4449 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 4498

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 4499 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4558

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4559 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4603



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 41/294 (13%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA-- 427
           +V ++ C E    I+S  G+L+ +             +  ++P+ +E +    + S+A  
Sbjct: 577 QVQQIVCSESIVLILSEDGKLYNWR----------MFKPETEPQLLEEIAHETIVSIASH 626

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           C   H  AI DI       NA     ++WG+ +  RLGH D   + +PT +T L+D    
Sbjct: 627 CEGRHFMAI-DI-----NRNA-----YSWGNGEDHRLGHGDTHARAVPTKIT-LLDRCVK 674

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVK-GISSGS 545
              CG   +  +T  G +YT G   + +LG+  + D+ + TVV    + E +   + SG 
Sbjct: 675 AVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGD 734

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI-- 603
            H   LTS G VY WG    G+LG G+     +P  VE+L   +V+ V  G+  + A+  
Sbjct: 735 AHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL--PKVQRVFAGAQFSMALTT 792

Query: 604 -----------CLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACST 646
                      CL   +       CS  R+  G + K+      G+  C A S+
Sbjct: 793 DGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSS 846



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPT---CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            +  WG  DK +LG + G +  +PT    ++RL        S   +  VG  G  KVY  G
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGS-KSLFIVGQNG--KVYACG 3153

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQ 567
               +G+LG     +  +      L +  VK   + SG  H   LT  G V++WG+  +G+
Sbjct: 3154 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3213

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G+    + P  VE LR +++  V CGSS +AAI
Sbjct: 3214 LGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI 3249



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 108/249 (43%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4286

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4287 DGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYA 4346

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 4347 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMNVADIACGSAHSAAITASGHVLTWGKGRY 4404

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C++   +V     GD     + 
Sbjct: 4405 GRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG 4464

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 4465 GSDGCKLPY 4473



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            GK++  G+   GRLG        LP  +  L  +    V    G    + LT  GKV++ 
Sbjct: 3147 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3206

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L+ + ++ ++ GS H A ++S G +YTWG    G+L
Sbjct: 3207 GEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3266

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            G GD+  +  P  V AL  R+V  V CGS     + L +  +V
Sbjct: 3267 GHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAV 3309


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 21  ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 79

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 136

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 137 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 190

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 191 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G  H   LTS G +Y WG N 
Sbjct: 246 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 305

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 306 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 344



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 183/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 31  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 89

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 90  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 149

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+       +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 150 NGQLGLGDTEDSL--VPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 206

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 207 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 255

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 316 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 375

Query: 583 EAL 585
           EAL
Sbjct: 376 EAL 378



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 192 TRCPKNESHRLVTPTYGSP-LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H++V+ T G+   +       +V  WG G    D G    G+ S      D 
Sbjct: 60  TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG----DFGRLGHGNSS------DL 109

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             P  +++   + ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 110 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 169

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   T A+T+ G++Y WG   +G   +G+R  R   +P ++  T  G +
Sbjct: 170 FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL--VPERVTST-GGEK 226

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +S VACG  HT  VS SG L+TYG   +G LGHG+L++   P ++E+L    +  ++ G 
Sbjct: 227 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 286

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  +   +  P  V    D   VQ S
Sbjct: 287 RHTMALTS-----------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS 335

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +T    V+  G   +GQLG  ++ DR+ 
Sbjct: 336 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNF 371



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 17  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 76

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A           +  G ++++WG  D GRLGH +      P  +  L      Q 
Sbjct: 77  ADHTVAY----------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 126

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 127 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 186

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    ++  V CG   T ++
Sbjct: 187 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 240



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L    +  ++ G+ H V
Sbjct: 22  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 81

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 82  AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 141

Query: 609 I 609
           +
Sbjct: 142 V 142



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 331 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 20  ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 135

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 189

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G  H   LTS G +Y WG N 
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 184/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 30  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 88

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 89  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 149 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 205

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 206 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 254

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374

Query: 583 EAL 585
           EAL
Sbjct: 375 EAL 377



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 192 TRCPKNESHRLVTPTYGSP-LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H++V+ T G+   +       +V  WG G    D G    G+ S      D 
Sbjct: 59  TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG----DFGRLGHGNSS------DL 108

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             P  +++   + ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 168

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   T A+T+ G++Y WG   +G   +G+R  R   +P ++  T  G +
Sbjct: 169 FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL--VPERVTST-GGEK 225

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +S VACG  HT  VS SG L+TYG   +G LGHG+L++   P ++E+L    +  ++ G 
Sbjct: 226 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 285

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  +   +  P  V    D   VQ S
Sbjct: 286 RHTMALTS-----------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS 334

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +T    V+  G   +GQLG  ++ DR+ 
Sbjct: 335 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNF 370



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A           +  G ++++WG  D GRLGH +      P  +  L      Q 
Sbjct: 76  ADHTVAY----------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 125

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    ++  V CG   T ++
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L    +  ++ G+ H V
Sbjct: 21  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 80

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 81  AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140

Query: 609 I 609
           +
Sbjct: 141 V 141



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 189/387 (48%), Gaps = 27/387 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WG      D  G + GS  ++ T  D L          L  + I+ G+K    +T 
Sbjct: 559 DVFMWGLN--DKDQLGGLKGSKVKSPTLCDHLSS--------LQCKFIAGGSKSTFFITN 608

Query: 280 EGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIY 336
           +G+++  GE   G+LG   +  +V+ P+LV  L+ + V  VS   G     ALT  G  +
Sbjct: 609 KGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAF 668

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           +WG   +G    G   S S      L +   G  V+ ++CG  H+A +  +  L+T+G G
Sbjct: 669 SWGDGENGQLGHGNLMSCSK---PHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLG 725

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            FG LGHG+ + + QPK V    G  V  V+CG    A  V I  D         K+++W
Sbjct: 726 DFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGS-RDAQTVCITDD--------DKVWSW 776

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           GD D G+LG    ER L+P  V +L      +  CG   TV LT  G V+T G     +L
Sbjct: 777 GDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRL 836

Query: 517 GN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G+      R   +VEG L+ + V  I+ G+ H   +T  G V++WG N +GQLG G++  
Sbjct: 837 GHGTDIHVRQPKLVEG-LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDV 895

Query: 576 RETPTFVEALRDRQVESVVCGSSITAA 602
           ++ P  +  L + +++ V CGSS + A
Sbjct: 896 KKVPNLITGLHNHRIKYVACGSSHSIA 922



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 14/344 (4%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
            +L   N+ +      + T    VF  G G +G+LG   +  V+ P+L+E +  IN++ +S
Sbjct: 1474 LLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKIS 1533

Query: 321  C--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
               G     AL+  GE+++WG    G    G R++ S   P+++ +   G  ++ +  G 
Sbjct: 1534 VHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQ--PKRI-EFFCGKIITNICAGG 1590

Query: 379  WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             H+A +  +G+L+T+G G +G LGHG+  +  +PK+VE+L+   V  VACG      +  
Sbjct: 1591 SHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTL-- 1648

Query: 439  IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                 C +N     +++WGD D G+LG    +   +P  +  L     V+  CG   ++ 
Sbjct: 1649 -----CITN--DDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMA 1701

Query: 499  LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
            LT  G +YT G   + +LG+   +     ++   L  + V  IS GS H  V T  G VY
Sbjct: 1702 LTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVY 1761

Query: 559  TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             WG N  GQLG G    R+TPT    L +++++ + CGS+ T A
Sbjct: 1762 CWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 26/281 (9%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WGEG          DG +     Q  +  PK +E      + NI  G  H+A +  
Sbjct: 1549 EVFSWGEGE---------DGKLGHGNRQTSSQ-PKRIEFFCGKIITNICAGGSHSAAIGL 1598

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
             GE++ WG+G+ GRLGH  + D   PK VE L    V  V+C  G+ QT  +T    +++
Sbjct: 1599 NGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWS 1658

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            WG  ++G   +G   S    +P  + + L G  + KV CG   +  ++  G L+T+G G 
Sbjct: 1659 WGDGDYGK--LGRGGSDGCKVPM-IIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGD 1715

Query: 398  FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            +  LGHG  ++V +P  V +L    V S++CG  H     D            G+++ WG
Sbjct: 1716 YYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTD-----------EGEVYCWG 1764

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
            D D+G+LG      +  PT  T L++    + SCG   T+ 
Sbjct: 1765 DNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 11/165 (6%)

Query: 217 ILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           I  D  +W  G   GD G    G   +       L+P  +E    L +  I  GA+    
Sbjct: 767 ITDDDKVWSWG--DGDFGKLGRGGSER------CLIPVEVEQLRGLQICKILCGAQFTVA 818

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           +TK G V+ WG+G   RLGH  ++ V  PKLVE L G +V  ++ G     A+T+ GE++
Sbjct: 819 LTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVF 878

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           +WG N+HG    GE   +   +P  L   L   R+  VACG  H+
Sbjct: 879 SWGDNDHGQLGTGETDVKK--VPN-LITGLHNHRIKYVACGSSHS 920



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 5/161 (3%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +F WG  DK +LG + G +   PT    L        + G   T  +T  GK+Y+ G + 
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESS 619

Query: 513 HGQLG--NPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQL 568
            G+LG  +      S  +V G L +  V  +S  SG  HV  LTS G  ++WG   NGQL
Sbjct: 620 FGKLGIGDITGNVTSPRLVTG-LNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQL 678

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G G+      P  +EA   + V  + CGS+ +AAI  +K +
Sbjct: 679 GHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYL 719



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            +P ++E      +  +  G++ +  +TK
Sbjct: 1655 NVWSWGDGDYGKLGRGGSDG----------CKVPMIIEDLSGKGIVKVECGSQFSMALTK 1704

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G ++ WG+G   RLGH     V  P +V  L    V S+SCG       T  GE+Y WG
Sbjct: 1705 YGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWG 1764

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   P  L   L   ++ +++CG  HT   STS
Sbjct: 1765 DNDEGQ--LGDGTIIARQTP-TLNTFLLNKKIDRISCGSAHTIAWSTS 1809


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+++  GE  +GRLG  ++   +  P+ +  
Sbjct: 2968 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITA 3027

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3028 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3084

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+++G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3085 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVAC 3144

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3145 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3193

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   +VEG L+ + +  ++ G+
Sbjct: 3194 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGA 3252

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3253 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3309



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3951 GQLGG-IEGAKVKVPTPTEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4001

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4002 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4061

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L GV V  +A G  H+A ++ SG+LFT+G G +G LGHG+ ++
Sbjct: 4062 GNRSPCDR--PR-VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 4118

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK V++L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4119 QLKPKLVDALQGHRVIDVACGSGDAQTL-------CLTD--DDMVWSWGDGDYGKLGRGG 4169

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L      +  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4170 SDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4229

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4230 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4285

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4286 LQGKKINRVACGSAHTLAWSTSKPTNAG 4313



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3041 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+Y+WG   +G    G+  ++   L  KL   L G RV +VACG  +  T  ++  
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGDNATQ---LRPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3157

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3158 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK--------- 3208

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3209 --SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3266

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3267 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3312



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 181/413 (43%), Gaps = 39/413 (9%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G ++ WG    G+LG      V  P   E L+ +    +  GE    A+T  G++Y  G+
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
               G   +G   S S      L +++  V + KVA   G  H   +S+ G+++++G+   
Sbjct: 4000 GAGGRLGIGGTESVS---TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAED 4056

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN     +P+ +ESLRG++V  +A G  H+A I              G+LFTWG 
Sbjct: 4057 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT-----------ASGELFTWGK 4105

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +L P  V  L     +  +CG     T+ LT    V++ G   +G+L
Sbjct: 4106 GRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4165

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            G   +    I +    L    V  +  GS     LT  G+VYTWGK    +LG G     
Sbjct: 4166 GRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4225

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMP 623
              P  V+ L+ ++V ++  GS     +C  +   V             G  ++  + R+ 
Sbjct: 4226 RRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4283

Query: 624  FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT 676
               + KK N   CG     A ST K  NA   P +          YNHLQ+I+
Sbjct: 4284 AALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQ------VPMEYNHLQEIS 4330



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 17/324 (5%)

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T   +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G+IY 
Sbjct: 2942 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3001

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             G   +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F++G+
Sbjct: 3002 CGEATNGRLGLG-LSSGTIPIPRQI-TALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 3059

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G  G LGH +  N  +P+ +E+L+  +++ +ACG  H+AAI              G+L++
Sbjct: 3060 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-----------SGELYS 3108

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVH 513
            WG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    
Sbjct: 3109 WGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3168

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            G+LG   ++  +I     +L  + V  I  G+     LT  G V+TWGK    +LG G  
Sbjct: 3169 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD 3228

Query: 574  QERETPTFVEALRDRQVESVVCGS 597
                 P  VE LR +++  V  G+
Sbjct: 3229 VHVRKPQMVEGLRGKKIVHVAVGA 3252



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 155/331 (46%), Gaps = 39/331 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      LG K++ +VS P   + LS + V  + C E     L+ SG +YT  + 
Sbjct: 410 EVIAWG-----LLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNY- 463

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                       +S  L   L  +L   ++ K+A    G+ H   +S++G++F++G G  
Sbjct: 464 ------------KSTTLAPMLIHSLSSRKIVKLAAHPDGQ-HYLALSSNGEVFSWGCGDG 510

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +P  + +  G +    V  +ACG  ++A I            I G+L+
Sbjct: 511 GRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT-----------IDGELY 559

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E +  P  VT L     V  +CG     T+ +T  G+V++ G   
Sbjct: 560 TWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGD 619

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  +  +  GS     LT  G VYTWGK  N +LG G 
Sbjct: 620 YGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 679

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +    P  ++ L+ ++V  V  GS+   A+
Sbjct: 680 DEHVRFPKLLDTLQGKKVVDVAVGSTHCLAL 710



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 38/362 (10%)

Query: 205 PTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDV 264
           P   SP    K  L++V+ WG  +LG  +   V G             P   +S   L V
Sbjct: 396 PNCNSP-TSHKGTLQEVIAWG--LLGWKLHANVSG-------------PIHCKSLSSLGV 439

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
             I    K   +++  G V+     K   L   +   +S  K+V+  +  + Q       
Sbjct: 440 TQIVCSEKGFLILSSSGAVYTQNY-KSTTLAPMLIHSLSSRKIVKLAAHPDGQ------- 491

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWHTAI 383
              AL+ +GE+++WG  + G    G+            F+    G  V  +ACG  ++A+
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAV 551

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMV 441
           ++  G+L+T+G G +G LGHG+ ++ + P  V +L+GLKV  VACG     T A+ +   
Sbjct: 552 ITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTE--- 608

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    G++++WGD D G+LG    +    P  V +L D D V+  CG   +V LT 
Sbjct: 609 --------NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK 660

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+VYT G   + +LG+   +      +   L+ + V  ++ GS H   LT  G V++WG
Sbjct: 661 DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 720

Query: 562 KN 563
            N
Sbjct: 721 SN 722



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR++    GS   +   +  D M+W  G   GD G    G     K      +P  ++
Sbjct: 4129 QGHRVIDVACGSGDAQTLCLTDDDMVWSWG--DGDYGKLGRGGSDGCK------IPMKID 4180

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 4181 SLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4240

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G ++++VACG
Sbjct: 4241 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACG 4297

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4298 SAHTLAWSTS 4307



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2946 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKIYAC 3002

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   +  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3003 GEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALT-----------VD 3051

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G++Y+ G 
Sbjct: 3052 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3111

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + + + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3112 GEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3169

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3170 KLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3206



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 7/163 (4%)

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            +  I  K+F WG  DK +LG + G +  +P+    L   + VQ + G      +T  GK+
Sbjct: 2940 AGTIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKI 2999

Query: 506  YTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            Y  G A +G+LG           R IT +   + ++    + SG  H   LT  G V++W
Sbjct: 3000 YACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKV--AVHSGGRHAMALTVDGKVFSW 3057

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+  +G+LG       + P  +EAL+ +++  + CGSS +AAI
Sbjct: 3058 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3100



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LD+  +  G++ +  +TK+
Sbjct: 612 VWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDIVKVCCGSQFSVALTKD 661

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH  +  V  PKL++ L G  V  V+ G     ALT  GE+++WG 
Sbjct: 662 GQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGS 721

Query: 341 NN 342
           N+
Sbjct: 722 ND 723



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 14/220 (6%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E+L  L V  VA G     A+            
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 2994

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
            + GK++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GKV
Sbjct: 2995 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3054

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +Y+WG    
Sbjct: 3055 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3114

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3115 GRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3154



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3939 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 3989

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3990 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4047

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  I++G  H A +T+ G ++TWGK
Sbjct: 4048 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGVEVVD-IAAGGAHSACITASGELFTWGK 4105

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG GDS+++  P  V+AL+  +V  V CGS     +CL
Sbjct: 4106 GRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4148


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   +  P+ +  
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISA 1850

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 1851 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 1907

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+++G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 1908 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVAC 1967

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 1968 GSRDAQTLALTD-----------EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 2016

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   +VEG L+ + +  ++ G+
Sbjct: 2017 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGA 2075

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G V+ WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 2076 LHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 195/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 2774 GQLGG-IEGAKVKVPTPTEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 2824

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 2825 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGH 2884

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L GV V  +A G  H+A ++ SG+L+T+G G +G LGHG+ ++
Sbjct: 2885 GNRSPCDR--PR-VIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSED 2941

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 2942 QLKPKLVEALQGHRVIDVACGSGDAQTL-------CLTD--DDMVWSWGDGDYGKLGRGG 2992

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 2993 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3052

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3053 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 3108

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 3109 LQGKKINRVACGSAHTLAWSTSKPTNAG 3136



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 1826 GEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1885

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + A+T SGE+Y+WG   +G    G+ 
Sbjct: 1886 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  KL   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 1946 TTQ---LRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGC 2002

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGTD 2051

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+V+  G   HGQ GN     +R  T+
Sbjct: 2052 VHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTL 2111

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 2112 VQG-LEGQKITRVACGSSHSVAWTT 2135



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 156/324 (48%), Gaps = 17/324 (5%)

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T   +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G++Y 
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 1824

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             G   +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F++G+
Sbjct: 1825 CGEATNGRLGLG-LSSGTIPIPRQI-SALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 1882

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G  G LGH +  N  +P+ +E+L+  +++ +ACG  H+AAI              G+L++
Sbjct: 1883 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-----------SGELYS 1931

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVH 513
            WG  + GRLGH D   +L P  V  L+    VQ +CG     T+ LT  G V++ G    
Sbjct: 1932 WGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 1991

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            G+LG   ++  +I     +L  + V  I  G+     LT  G V+TWGK    +LG G  
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD 2051

Query: 574  QERETPTFVEALRDRQVESVVCGS 597
                 P  VE LR +++  V  G+
Sbjct: 2052 VHVRKPQMVEGLRGKKIVHVAVGA 2075



 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 181/416 (43%), Gaps = 39/416 (9%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G ++ WG    G+LG      V  P   E L+ +    +  GE    A+T  G++Y  G+
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
               G   +G   S S      L +++  V + KVA   G  H   +S+ G+L+++G+   
Sbjct: 2823 GAGGRLGIGGTESVST---PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 2879

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN     +P+ +ESLRG++V  +A G  H+A I              G+L+TWG 
Sbjct: 2880 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACI-----------TASGELYTWGK 2928

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +L P  V  L     +  +CG     T+ LT    V++ G   +G+L
Sbjct: 2929 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 2988

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            G   +    + +    L    V  +  GS     LT  G+VYTWGK    +LG G     
Sbjct: 2989 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 3048

Query: 577  ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMP 623
              P  V+ L+ ++V ++  GS     +C  +   V             G  ++  + R+ 
Sbjct: 3049 RRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3106

Query: 624  FGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSG 679
               + KK N   CG     A ST K  NA   P +          YNHLQ+I   G
Sbjct: 3107 AALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQ------VPMEYNHLQEIAIIG 3156



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 1763 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTAE 1819

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   +  P+++ +L    VK VA   G  H  A+        
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALT------- 1872

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 1873 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 1928

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +Y+ G   +G+LG+     + + + + V+ G    +   G  S       LT  G V++W
Sbjct: 1929 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACG--SRDAQTLALTDEGMVFSW 1986

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 1987 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR++    GS   +   +  D M+W  G   GD G    G     K      +P  ++
Sbjct: 2952 QGHRVIDVACGSGDAQTLCLTDDDMVWSWG--DGDYGKLGRGGSDGCK------VPMKID 3003

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 3004 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3063

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G ++++VACG
Sbjct: 3064 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACG 3120

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 3121 SAHTLAWSTS 3130



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 2762 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 2812

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 2813 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 2870

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            +Y+ G A  G+LG  N    DR   V+E     E V  I++G  H A +T+ G +YTWGK
Sbjct: 2871 LYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGVEVVD-IAAGGAHSACITASGELYTWGK 2928

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG GDS+++  P  VEAL+  +V  V CGS     +CL
Sbjct: 2929 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 2971



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 96/220 (43%), Gaps = 14/220 (6%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E+L  L V  VA G     A+            
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 1817

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
              GK++  G+A  GRLG  +      +P  ++ L ++    V    G    + LT  GKV
Sbjct: 1818 AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 1877

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +Y+WG    
Sbjct: 1878 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 1937

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 1938 GRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLAL 1977


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 179/351 (50%), Gaps = 18/351 (5%)

Query: 238 DGSVSQNKTQVDALLPKLLES--AVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRL 294
           DG +     + D L+P +L    A    + ++  GA H  A    E +V+ WG G  GRL
Sbjct: 51  DGQLGHGDAE-DRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRL 109

Query: 295 GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
           GH  + DV  P+ V+ L GI ++ ++CG+    A+T +GE+ +WG N +G   +G   + 
Sbjct: 110 GHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ--LGLGTTE 167

Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
              LP+K+  + +GV V  +A G  HTA V+  G L+ +G G +G LG G+  +   P++
Sbjct: 168 DSLLPQKI-QSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEK 226

Query: 415 VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           V S+ G K+  +ACG  HT  +           +  G L+T+G +  G+LGH D E  L+
Sbjct: 227 VSSVEGEKMVLIACGWRHTITV-----------SSSGSLYTYGWSKYGQLGHGDFEDHLV 275

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
           P  +  L D    Q S G   T+ LT  GK+Y  G    GQ+G     D    V     +
Sbjct: 276 PHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPE 335

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           ++ V  ++ G  H    T   +V++WG+  +GQLG G+  +R  P  ++AL
Sbjct: 336 DQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDAL 386



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 177/350 (50%), Gaps = 25/350 (7%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGIN-----VQSVS 320
           +S GA H+  +   G V C WG G+DG+LGH    D   P +   LSG +     + SV 
Sbjct: 27  VSAGASHSVALLA-GNVLCSWGRGEDGQLGHGDAEDRLVPTV---LSGFDAAAPGITSVI 82

Query: 321 CGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           CG   T A ++   ++Y+WG  + G   +G   S   + P+ +   L G+++ ++ACG+ 
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWGDFGR--LGHGNSSDVFTPQPV-KALQGIKIKQIACGDS 139

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           H   V+ +G++ ++G    G LG G  ++   P++++S  G+ VK +A G  HTAA+ + 
Sbjct: 140 HCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTE- 198

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                      G L+ WG    G LG  D   +L+P  V+ +     V  +CG   T+ +
Sbjct: 199 ----------DGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITV 248

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           +  G +YT G + +GQLG+   +D  +      LK+  +  IS G  H   LTS G +Y 
Sbjct: 249 SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYG 308

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           WG N  GQ+G+GD+ +   P  V+   D++V  V CG   T A    K++
Sbjct: 309 WGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNV 358



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISS-- 543
           V  S G   +V L     + + G    GQLG+  A+DR + TV+ G   +    GI+S  
Sbjct: 25  VLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSG--FDAAAPGITSVI 82

Query: 544 -GSYHVAVLTSG-GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            G+ H    +     VY+WG    G+LG G+S +  TP  V+AL+  +++ + CG S   
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCL 142

Query: 602 AICL 605
           A+ +
Sbjct: 143 AVTM 146


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 176/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 11  ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 69

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 126

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 127 TXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTE------ 180

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 181 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G+ H   LTS G +Y WG N 
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNK 295

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 296 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 334



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 182/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 21  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXE 79

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 80  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQ 139

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 140 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 196

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K   VACG  HT ++           +  G L+T+G +  G
Sbjct: 197 LGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV-----------SYSGALYTYGWSKYG 245

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T  LT  GK+Y  G    GQ+G     
Sbjct: 246 QLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL 305

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 306 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 365

Query: 583 EAL 585
           EAL
Sbjct: 366 EAL 368



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 7   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 66

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A           +  G ++++WG  D GRLGH +      P  +  L      Q 
Sbjct: 67  ADHTVAY----------SQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 116

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 117 ACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTA 176

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    +   V CG   T ++
Sbjct: 177 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV 230



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 321 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 369


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 44/405 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            ++  WG     G +G  +     Q+        P  +ES     +  +SLG +H  ++ +
Sbjct: 1214 ELFTWGNNT-SGQLGHGLAAGKHQST-------PMRVESLKQTPIMMMSLGGEHTVVIDR 1265

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
               ++ WG GK G+LGH V+   + PK +E  +G  + S++ G + T  L   G+++ +G
Sbjct: 1266 SFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFG 1325

Query: 340  HNNHGADLVGERRSRSHW-LPRKLFDTLD------GVRVSKVACGEWHTAIVSTSGQLFT 392
             N HG   +G    + H  +P ++ +T D        RV+ + CG  H+ + ++ G +++
Sbjct: 1326 SNEHGQ--LGLNDLKHHLPIPTRV-NTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYS 1382

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            +G    G LGHG+ ++   PK ++ L+G  +K + CGP+HT    D+             
Sbjct: 1383 FGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDL-----------DS 1431

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL-------GKV 505
            ++ WG  +   LG    + +L+P  V   V+    +  CG   T  LT         G V
Sbjct: 1432 VYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491

Query: 506  YTMGSAVHGQL---GNPKAK--DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            Y  GS+ HG+L   G+P++   D++   +   +    V  ++SG+   A++TS G++Y W
Sbjct: 1492 YICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMW 1551

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVC---GSSITAA 602
            G   +GQ+G G +Q+   PT V    ++     +    GS+IT +
Sbjct: 1552 GAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIVDESGSTITLS 1596



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 155/334 (46%), Gaps = 44/334 (13%)

Query: 315  NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            + +SVSCG      +T  GE++TWG+N  G    G    +    P ++ ++L    +  +
Sbjct: 1195 HAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRV-ESLKQTPIMMM 1253

Query: 375  ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
            + G  HT ++  S  ++++G+G +G LGHG     + PK +E   G K+ S+A G WHT 
Sbjct: 1254 SLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHT- 1312

Query: 435  AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQAS--- 490
                 +V R      GG LF +G  + G+LG  D +  L +PT   R+   D   A    
Sbjct: 1313 -----LVLRS-----GGDLFAFGSNEHGQLGLNDLKHHLPIPT---RVNTADIHHAGQPT 1359

Query: 491  ------CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISS 543
                  CG   +V  T  G VY+ G+   GQLG+   +  R   +++G LK + +K I+ 
Sbjct: 1360 RVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITC 1418

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G YH  V T   SVY WG+  +  LG G ++    P  VE   +++VE VVCG   TA +
Sbjct: 1419 GPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATL 1478

Query: 604  CLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
                               P G      N Y CG
Sbjct: 1479 T-----------------QPMGDSNTGGNVYICG 1495



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL--GLGDSQERETPTFVEALRDRQ 589
            +  E+  K +S G  H AV+T  G ++TWG N +GQL  GL   + + TP  VE+L+   
Sbjct: 1190 RFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTP 1249

Query: 590  VESVVCGSSITAAI 603
            +  +  G   T  I
Sbjct: 1250 IMMMSLGGEHTVVI 1263


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 9   ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 124

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 125 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 178

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G  H   LTS G +Y WG N 
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNK 293

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 294 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 184/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 19  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 77

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 78  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 137

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 138 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 194

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 195 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 243

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 304 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363

Query: 583 EAL 585
           EAL
Sbjct: 364 EAL 366



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 64

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A           +  G ++++WG  D GRLGH +      P  +  L      Q 
Sbjct: 65  ADHTVAY----------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 114

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 115 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 174

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    ++  V CG   T ++
Sbjct: 175 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 228



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L    +  ++ G+ H V
Sbjct: 10  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 69

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 70  AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 129

Query: 609 I 609
           +
Sbjct: 130 V 130



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 319 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 183/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKH-AALVTKEGE 282
           +L GDI    G   DG +     + D L P  L +     + +++ GA H  A      E
Sbjct: 30  LLSGDIVCSWGRGEDGQLGHGDAE-DRLSPTQLSALDDHQIVSVTCGADHTVAYSESRME 88

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 89  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 149 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 205

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 206 LGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 254

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 255 QLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 315 DQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKII 374

Query: 583 EAL 585
           EAL
Sbjct: 375 EAL 377



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 172/339 (50%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L    + SV+CG   
Sbjct: 20  ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 326 TCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++S  E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 79  TVAYSESRMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 135

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 189

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  +      L    +  IS G  H   LTS G +Y WG N 
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAV 343



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 164/336 (48%), Gaps = 25/336 (7%)

Query: 192 TRCPKNESHRLVTPTYGSP-LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H++V+ T G+   +   +   +V  WG G    D G    G+ S      D 
Sbjct: 59  TQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWG----DFGRLGHGNSS------DL 108

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             P  +++   + ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 168

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   T A+T+ G++Y WG   +G   +G+R  R   +P ++  +  G +
Sbjct: 169 FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL--VPERV-TSAGGEK 225

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +S VACG  HT  VS SG L+TYG   +G LGHG+L++   P ++E+L    +  ++ G 
Sbjct: 226 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGW 285

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  +   +  P  V    D   VQ S
Sbjct: 286 RHTMALTS-----------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVS 334

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +T    V+  G   +GQLG  ++ DR+ 
Sbjct: 335 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNF 370



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L   ++ SV CG
Sbjct: 16  RVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCG 75

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A  +  ++          +++WG  D GRLGH +      P  +  L      Q 
Sbjct: 76  ADHTVAYSESRME----------VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 125

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    ++  V CG   T ++
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV 239



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L +  +  ++ G+ H V
Sbjct: 21  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTV 80

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   S   VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 81  AYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140

Query: 609 I 609
           +
Sbjct: 141 V 141



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSC 321
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS  G + Q +  
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDGASGQHIES 389

Query: 322 GEF 324
             F
Sbjct: 390 SNF 392


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 183/357 (51%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+++  GE  +GRLG  ++   +  P+ +  
Sbjct: 2979 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITA 3038

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   ++ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3039 LSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3095

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+++G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3096 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVAC 3155

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3156 GSRDAQTLALTD-----------EGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 3204

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   +VEG L+ + +  ++ G+
Sbjct: 3205 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGA 3263

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3264 LHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3320



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 195/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3962 GQLGG-IEGAKVKVPTSTEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4012

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4013 GGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4072

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L GV V  +A G  H+A ++ SG+LFT+G G +G LGHG+ ++
Sbjct: 4073 GNRSPCDR--PR-VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSED 4129

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK V++L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 4130 QLKPKLVDALQGHRVIDVACGSGDAQTL-------CLTD--DDMVWSWGDGDYGKLGRGG 4180

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4240

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4241 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4296

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4297 LQGKKINRVACGSAHTLAWSTSKPTNAG 4324



 Score =  153 bits (387), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 18/287 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3052 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3111

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+Y+WG   +G    G+  ++   L  KL   L G RV +VACG  +  T  ++  
Sbjct: 3112 TSSGELYSWGLGEYGRLGHGDNTTQ---LRPKLVKVLLGHRVIQVACGSRDAQTLALTDE 3168

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK--------- 3219

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               G ++TWG  D  RLGH        P  V  L     V  + G +  + +T  G+VY 
Sbjct: 3220 --SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYA 3277

Query: 508  MGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3323



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 165/346 (47%), Gaps = 30/346 (8%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P LLES   + ++ +++  G KH   ++ EGEV+ WGE +DG+LGH        P+++E 
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4086

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            L G+ V  ++ G   +  +T SGE++TWG   +G   +G   S     P KL D L G R
Sbjct: 4087 LRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR--LGHGDSEDQLKP-KLVDALQGHR 4143

Query: 371  VSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            V  VAC  G+  T  ++    ++++GDG +G LG G       P +++SL GL V  V C
Sbjct: 4144 VIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVEC 4203

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G   + A+              G ++TWG  D  RLGH   +    P  V  L     + 
Sbjct: 4204 GSQFSVALTK-----------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4252

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSG 544
             + G +  V  T  G+VYT G    GQLG    N   + R +  ++GK     +  ++ G
Sbjct: 4253 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----INRVACG 4308

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
            S H    ++  S  T       Q+ +  +  +E P  + ALR+R V
Sbjct: 4309 SAHTLAWST--SKPTNAGKLPAQVPMEYNHLQEIP--IMALRNRLV 4350



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%), Gaps = 17/324 (5%)

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T   +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G+IY 
Sbjct: 2953 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3012

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             G   +G   +G   S +  +PR++   L    + KVA   G  H   ++  G++F++G+
Sbjct: 3013 CGEATNGRLGLG-LSSGTIPIPRQI-TALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGE 3070

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G  G LGH +  N  +P+ +E+L+  +++ +ACG  H+AAI              G+L++
Sbjct: 3071 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-----------SGELYS 3119

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVH 513
            WG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    
Sbjct: 3120 WGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDF 3179

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            G+LG   ++  ++     +L  + V  I  G+     LT  G V+TWGK    +LG G  
Sbjct: 3180 GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTD 3239

Query: 574  QERETPTFVEALRDRQVESVVCGS 597
                 P  VE LR +++  V  G+
Sbjct: 3240 VHVRKPQMVEGLRGKKIVHVAVGA 3263



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 188/430 (43%), Gaps = 56/430 (13%)

Query: 204 TPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD 263
           +P + +     K  L++V+ WG  +LG  +   V+G +     Q  AL          L 
Sbjct: 399 SPPHCNSPTSHKGTLQEVIAWG--LLGWKLYANVNGPI-----QCKAL--------SSLG 443

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC-- 321
           V  I    K   +++  G V+                    P L+  LS   +  ++   
Sbjct: 444 VTQIVCSEKGFLILSSSGAVY----------SQNYKSTTLAPMLIHVLSSRKIVKLAAHP 493

Query: 322 -GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK----VAC 376
            G+    AL+ +GE+++WG  + G    G+    ++    K+  T +G +  K    VAC
Sbjct: 494 DGQ-HYLALSSNGEVFSWGCGDGGRLGHGDT---TYLEEPKMIGTFNGKQAGKHVVHVAC 549

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTA 434
           G  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V + +GLKV  VACG     T 
Sbjct: 550 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           A+ +            G++++WGD D G+LG    +    P  V +L D D V+  CG  
Sbjct: 610 AVTE-----------NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQ 658

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +V LT  G+VYT G   + +LG+   +      +   L+ + V  ++ GS H   LT  
Sbjct: 659 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDD 718

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ 614
           G V +WG N   Q        ++ P  +  L  + +  + CG   + A       SVG  
Sbjct: 719 GEVLSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWSSSSEWSVGK- 777

Query: 615 SSCSQCRMPF 624
                 R+PF
Sbjct: 778 ------RVPF 781



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 159/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3950 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTST-EALATLRPVQLIGGEQTLFAVTADGKLY 4006

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + ++ VA   G  H  A              
Sbjct: 4007 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4066

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G+LFTWG    GRLGH D
Sbjct: 4067 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD 4126

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     +  +CG     T+ LT    V++ G   +G+LG   +    I
Sbjct: 4127 SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI 4186

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4187 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4246

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4247 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4304

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P +          YNHLQ+I
Sbjct: 4305 VACGSAHTLAWSTSKPTNAGKLPAQ------VPMEYNHLQEI 4340



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR++    GS   +   +  D M+W  G   GD G    G     K      +P  ++
Sbjct: 4140 QGHRVIDVACGSGDAQTLCLTDDDMVWSWG--DGDYGKLGRGGSDGCK------IPMKID 4191

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 4192 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4251

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G ++++VACG
Sbjct: 4252 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACG 4308

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4309 SAHTLAWSTS 4318



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2951 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3007

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   +  P+++ +L    +K VA   G  H  A+        
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALT------- 3060

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 3061 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3116

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +Y+ G   +G+LG+     + + + + V+ G    +   G  S       LT  G V++W
Sbjct: 3117 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG--SRDAQTLALTDEGFVFSW 3174

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3175 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 3217



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 14/220 (6%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E+L  L V  VA G     A+            
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3005

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
            + GK++  G+A  GRLG  +      +P  +T L ++    V    G    + LT  GKV
Sbjct: 3006 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKV 3065

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +Y+WG    
Sbjct: 3066 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3125

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3126 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3165


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 173/341 (50%), Gaps = 15/341 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  +S GA H+  +     V  WG G+DG+LGH    +   P +V  L    + SV+CG 
Sbjct: 16  VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGA 75

Query: 324 FQTCALTKSGE-IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
             T AL+ S + +Y+WG  + G   +G   S   ++P+ +   L G+ V ++ACG+ H  
Sbjct: 76  DHTTALSNSTKTVYSWGWGDFGR--LGHGNSSDLFIPQPI-KALKGLEVKQIACGDSHCL 132

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            ++T G++  +G    G LG G+ ++V  P ++ +  G+ VK +A G  HT A+ +    
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE---- 188

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   GKL+ WG    G LG  D E +L+P  V  +        +CG   T+ +   
Sbjct: 189 -------NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAES 241

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G +YT G + +GQLG+    D  I      LK + ++ I+ G  H   L S G +Y WG 
Sbjct: 242 GNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGW 301

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N  GQ+G G+++++ +P  V+ L+D+ V  V CG   T A+
Sbjct: 302 NKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAM 342



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 170/335 (50%), Gaps = 15/335 (4%)

Query: 252 LPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P ++ +    ++ +++ GA H  AL      V+ WG G  GRLGH  + D+  P+ ++ 
Sbjct: 56  FPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKA 115

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G+ V+ ++CG+    A+T  GE+  WG N +G   +G   +     P KL    +GV 
Sbjct: 116 LKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQ--LGLGHTEDVLTPHKL-TAFEGVA 172

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +A G  HT  V+ +G+L+ +G G +G LG G+ ++   P +V ++ G  +K VACG 
Sbjct: 173 VKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGW 232

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT  + +            G ++T+G +  G+LGH D    L+P  V  L        +
Sbjct: 233 RHTICVAE-----------SGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAIT 281

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            G   T  L   G++Y  G    GQ+G    +D+S   +   L+++ V  +  G  H   
Sbjct: 282 GGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLA 341

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           +T  G+VY+WG+  +GQLG GD+ +R TP  +E L
Sbjct: 342 MTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEIL 376



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L++      V  +  G +H   +T  G V+ WG G  G+LGH   +D S PK +E LS
Sbjct: 318 PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILS 377


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 174/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 20  ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 135

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+ +K VA G  HTAA+ +      
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTE------ 189

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G  H   LTS G +Y WG N 
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 305 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 183/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 30  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 88

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 89  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+ +  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 149 NGQLGLGD--TEDSLVPQKI-QAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 205

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 206 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 254

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374

Query: 583 EAL 585
           EAL
Sbjct: 375 EAL 377



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 192 TRCPKNESHRLVTPTYGSP-LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H++V+ T G+   +       +V  WG G    D G    G+ S      D 
Sbjct: 59  TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG----DFGRLGHGNSS------DL 108

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             P  +++   + ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 168

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   T A+T+ G++Y WG   +G   +G+R  R   +P ++  T  G +
Sbjct: 169 FEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL--VPERVTST-GGEK 225

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +S VACG  HT  VS SG L+TYG   +G LGHG+L++   P ++E+L    +  ++ G 
Sbjct: 226 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 285

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  +   +  P  V    D   VQ S
Sbjct: 286 RHTMALTS-----------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS 334

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +T    V+  G   +GQLG  ++ DR+ 
Sbjct: 335 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNF 370



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A           +  G ++++WG  D GRLGH +      P  +  L      Q 
Sbjct: 76  ADHTVAY----------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 125

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTA 185

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    ++  V CG   T ++
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 239



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L    +  ++ G+ H V
Sbjct: 21  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 80

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 81  AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 140

Query: 609 I 609
           +
Sbjct: 141 V 141



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 330 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   G++ C WG G+DG+LGH    D   P  +  L G  + SV+CG   
Sbjct: 9   ISAGASHSVALLS-GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++SG E+Y+WG  + G   +G   S   + P  +   L G+R+ ++ACG+ H   V
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGIRIKQIACGDSHCLAV 124

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G+ ++   P+++++  G+++K VA G  HTAA+ +      
Sbjct: 125 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------ 178

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   +L+P  VT          +CG   T+ ++  G 
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  I      L   F+  IS G  H   LTS G +Y WG N 
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK 293

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ ++ +P  V    D++V  V CG   T A+
Sbjct: 294 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 184/363 (50%), Gaps = 20/363 (5%)

Query: 228 VLGGDI----GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-E 282
           +L GDI    G   DG +     + D   P  L +     + +++ GA H    ++ G E
Sbjct: 19  LLSGDIVCSWGRGEDGQLGHGDAE-DRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGME 77

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  GRLGH  + D+  P  ++ L GI ++ ++CG+    A+T  GE+ +WG N 
Sbjct: 78  VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 137

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G   +G+  +    +P+K+    +G+R+  VA G  HTA V+  G L+ +G G +G LG
Sbjct: 138 NGQLGLGD--TEDSLVPQKI-QAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLG 194

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
            G+  +   P+ V S  G K+  VACG  HT ++           +  G L+T+G +  G
Sbjct: 195 LGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-----------SYSGALYTYGWSKYG 243

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LGH D E  L+P  +  L +    Q S G   T+ LT  GK+Y  G    GQ+G     
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D+   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R  P  +
Sbjct: 304 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363

Query: 583 EAL 585
           EAL
Sbjct: 364 EAL 366



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 192 TRCPKNESHRLVTPTYGSP-LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H++V+ T G+   +       +V  WG G    D G    G+ S      D 
Sbjct: 48  TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG----DFGRLGHGNSS------DL 97

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             P  +++   + ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 98  FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA 157

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   T A+T+ G++Y WG   +G   +G+R  R   +P ++  T  G +
Sbjct: 158 FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL--VPERVTST-GGEK 214

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +S VACG  HT  VS SG L+TYG   +G LGHG+L++   P ++E+L    +  ++ G 
Sbjct: 215 MSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGW 274

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  +   +  P  V    D   VQ S
Sbjct: 275 RHTMALTS-----------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS 323

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +T    V+  G   +GQLG  ++ DR+ 
Sbjct: 324 CGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNF 359



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 64

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A           +  G ++++WG  D GRLGH +      P  +  L      Q 
Sbjct: 65  ADHTVAY----------SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQI 114

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 115 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 174

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V +    ++  V CG   T ++
Sbjct: 175 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV 228



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DR        L    +  ++ G+ H V
Sbjct: 10  SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 69

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG G+S +  TP  ++AL   +++ + CG S   A+ +   
Sbjct: 70  AYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGE 129

Query: 609 I 609
           +
Sbjct: 130 V 130



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + PK++E LS
Sbjct: 319 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 175/349 (50%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     + D L+P ++       + ++  GA H  A    E +V+ WG G  GRLGH
Sbjct: 43  DGQLGHGDAE-DRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGH 101

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + DV  P+ V+ L GI ++ ++CG+    A+T +GE+ +WG N +G   +G   +   
Sbjct: 102 GNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQ--LGLGTTEDS 159

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+ +    +G+ V  +A G  HTA V+  G ++ +G G +G LG G+  +   P++V 
Sbjct: 160 LLPQTI-QAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVS 218

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+ G K+  VACG  HT  +           +  G L+T+G +  G+LGH D E  L+P 
Sbjct: 219 SVEGDKMVLVACGWRHTITV-----------SSSGSLYTYGWSKYGQLGHGDFEDHLVPH 267

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L D    Q S G   T+ LT  GK+Y  G    GQ+G     D          +E+
Sbjct: 268 KVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ 327

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  ++ G  H    T   +V+ WG+  +GQLG G+  +R TP  ++AL
Sbjct: 328 KVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376



 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 18/364 (4%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPK 306
           +DA L  + + A    V  +S GA H+  +   G V C WG G+DG+LGH    D   P 
Sbjct: 1   MDAALSAVADEAPPA-VVLVSAGASHSVALLA-GNVLCTWGRGEDGQLGHGDAEDRLVPT 58

Query: 307 LVECLSGINVQSVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           ++       + SV CG   T A ++   ++Y+WG  + G   +G   S   + P+ +   
Sbjct: 59  VISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG--RLGHGNSTDVFTPQPV-KA 115

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           L G+++ ++ACG+ H   V+ +G++ ++G    G LG G  ++   P+ +++  G+ VK 
Sbjct: 116 LQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKM 175

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           +A G  HTAA+ +            G ++ WG    G LG  D   + +P  V+ +    
Sbjct: 176 IAAGAEHTAAVTE-----------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDK 224

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
            V  +CG   T+ ++  G +YT G + +GQLG+   +D  +      LK+     IS G 
Sbjct: 225 MVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGW 284

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            H   LTS G +Y WG N  GQ+G GD+ +  +P  V    +++V  V CG   T A   
Sbjct: 285 RHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTE 344

Query: 606 HKSI 609
            K++
Sbjct: 345 KKNV 348



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 28/49 (57%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  ++ G +H    T++  VF WG G  G+LGH   +D + P +++ LS
Sbjct: 329 VAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 184/387 (47%), Gaps = 30/387 (7%)

Query: 221  VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            VM+WG   +  LGG  G  V              +P    +   L   +I+ G+K   +V
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVK-------------VPTFSPTISRLRPIHIAGGSKSLFVV 3109

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEI 335
            +++G+V+  GEG +GRLG  V  +V  P  +  L    V+ V+   G     ALT  G++
Sbjct: 3110 SQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3169

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            ++WG    G    G R +     PR L + L   ++  +ACG  H+A +S+ G+L+T+G 
Sbjct: 3170 FSWGEGEDGKLGHGNRSTLDK--PR-LVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3226

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G LGHG+     +PK V +L G +V  VACG    A  + +  D        G +F+
Sbjct: 3227 GEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGS-RDAQTLALTED--------GAVFS 3277

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            WGD D G+LG    E    P  + RL     +Q  CG   ++ LT  G+V+T G   + +
Sbjct: 3278 WGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYR 3337

Query: 516  LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            LG+   +          L+   V  ++ G+ H   +T  G VY WG N +GQ G G++  
Sbjct: 3338 LGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFV 3397

Query: 576  RETPTFVEALRDRQVESVVCGSSITAA 602
             + P  V  L    V  V CGSS + A
Sbjct: 3398 NKKPALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 187/381 (49%), Gaps = 35/381 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++GS  +  T  +AL       +++  VQ ++ G +    VT +G++F  G G 
Sbjct: 4225 GQLGG-LEGSRIKTPTPCEAL-------SLLRPVQ-LAGGEQSLFAVTPDGKLFATGYGS 4275

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG   +   + P L+  L  + V+  +V+ G     ALT  GE+Y WG    G    
Sbjct: 4276 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4335

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++
Sbjct: 4336 GNRMSYDR---PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSED 4392

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
              +PK VE+L G +   +ACG     T  I D              +++WGD D G+LG 
Sbjct: 4393 QLRPKLVEALLGYRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4441

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               +   LP  +  L     ++  CG   +V LT  G VYT G     +LG+       +
Sbjct: 4442 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRR 4501

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             + +  ++GK     +  I++GS H    +  G V+TWG N  GQLG G     + P  V
Sbjct: 4502 PKKVAALQGK----KIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLV 4557

Query: 583  EALRDRQVESVVCGSSITAAI 603
             AL+ + +  V CGS+ T A+
Sbjct: 4558 AALQGKHIVKVTCGSAHTLAL 4578



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 154/310 (49%), Gaps = 26/310 (8%)

Query: 252  LPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +P LL S   + V+ +++  G KH   +T +GEV+ WGEG+DG+LGH   M    PKLVE
Sbjct: 4289 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4348

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G++V  ++CG   + A+T SG + TWG   +G   +G   S     P KL + L G 
Sbjct: 4349 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSEDQLRP-KLVEALLGY 4405

Query: 370  RVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            R   +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V 
Sbjct: 4406 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4465

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            CG   + A+              G ++TWG  D  RLGH   E    P  V  L     +
Sbjct: 4466 CGSQFSVALTK-----------SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKII 4514

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISS 543
              + G +  V  +  G+V+T G    GQLG+       + R +  ++GK     VK ++ 
Sbjct: 4515 SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGK---HIVK-VTC 4570

Query: 544  GSYHVAVLTS 553
            GS H   L++
Sbjct: 4571 GSAHTLALST 4580



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 23/247 (9%)

Query: 365  TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
            T+  +R   +A G     +VS  G+++  G+GT G LG G   NV  P ++  L    VK
Sbjct: 3090 TISRLRPIHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVK 3149

Query: 425  SVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTR 480
             VA   G  H  A+            + GK+F+WG+ + G+LGH  G R  L  P  V  
Sbjct: 3150 KVAVHSGGKHALALT-----------LDGKVFSWGEGEDGKLGH--GNRSTLDKPRLVEA 3196

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEE 536
            L        +CG   +  ++  G++YT G   +G+LG+     + K + +  + G+   +
Sbjct: 3197 LRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQ 3256

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
               G  S       LT  G+V++WG    G+LG G S+   TP  +E L    V  + CG
Sbjct: 3257 VACG--SRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECG 3314

Query: 597  SSITAAI 603
            +  + A+
Sbjct: 3315 AQFSLAL 3321



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 39/317 (12%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVS 320
             +Q ++       L++KEG+++ W   K      +++  +++    +         +  
Sbjct: 600 FQLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETFISI-------AAH 652

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW------LPRKLFDTLDGVRVSK- 373
           C      A+  +   Y+WG        VG+ R   H       LP K+ ++L  VR+ K 
Sbjct: 653 CEGRHFLAVDSNFNAYSWG--------VGDSRRLGHGDCHARELPTKI-ESL--VRLVKS 701

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           V CG  ++A ++  G L+T+G GT+G LGHG   +   P  V +L+  +V  VA G    
Sbjct: 702 VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDA 761

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
             +       C ++   G +F WGD D G+LG+      LLP  +  L     V A  G 
Sbjct: 762 HTL-------CLTSE--GLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFA--GA 810

Query: 494 MLTVGLTGLGKVYTMGSA--VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
             ++ L+  G++Y+ G A  +  QL     +  S+  +   L+ + +  ++ G  H   L
Sbjct: 811 QFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLAL 870

Query: 552 TSGGSVYTWGKNANGQL 568
           +S G ++ WG+N N Q+
Sbjct: 871 SSSGEIFGWGRNDNQQI 887



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 4427 NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLGVIKVECGSQFSVALTK 4476

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + +GE++TWG
Sbjct: 4477 SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWG 4536

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
             N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 4537 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 4581



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           ++WG  D  RLGH D   + LPT +  LV        CG   +  +T  G +YT G   +
Sbjct: 668 YSWGVGDSRRLGHGDCHARELPTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTY 726

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G+LG+  + D+ +  +   LK+  V  ++  SG  H   LTS G V+ WG    G+LG G
Sbjct: 727 GRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNG 786

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI-------------CLHKSISVGDQSSCS 618
                  P  ++ L   +V+ V  G+  + A+             CL   +   +   CS
Sbjct: 787 SCNSSLLPQLIDCL--PRVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCS 844

Query: 619 QCRMPFGFRRKKHNCYNCGLHFCSACST 646
             R+  G + K+      G+  C A S+
Sbjct: 845 VPRLITGLQHKRIVDVAVGVAHCLALSS 872



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 2/153 (1%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +  WG  DK +LG + G +  +PT    +     +  + G      ++  GKVY  G   
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3122

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG     +  +      L +  VK   + SG  H   LT  G V++WG+  +G+LG 
Sbjct: 3123 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3182

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+    + P  VEALR +++  + CGSS +AAI
Sbjct: 3183 GNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI 3215



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 107/249 (42%), Gaps = 27/249 (10%)

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++ +G    G LG      +  P   E+L  L+   +A G     A+             
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP----------- 4264

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYT 507
             GKLF  G    GRLG    +   +PT +  L  V    V  + G    + LT  G+VY 
Sbjct: 4265 DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYA 4324

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  N  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   
Sbjct: 4325 WGEGEDGKLGHGNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY 4382

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ- 619
            G+LG GDS+++  P  VEAL   +   + CGS     +C+    +V     GD     + 
Sbjct: 4383 GRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4442

Query: 620  ----CRMPF 624
                C++P+
Sbjct: 4443 GSDGCKLPY 4451



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 2/163 (1%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            GK++  G+   GRLG        LP  +  L  +    V    G    + LT  GKV++ 
Sbjct: 3113 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3172

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L+ + ++ I+ GS H A ++S G +YTWG    G+L
Sbjct: 3173 GEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL 3232

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            G GD+  +  P  V AL  R+V  V CGS     + L +  +V
Sbjct: 3233 GHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAV 3275



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 9/156 (5%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           GKL+ W       +   + E + L         F  + A C     + +      Y+ G 
Sbjct: 619 GKLYNW------HIAKPEAEPQQLDFAEIANETFISIAAHCEGRHFLAVDSNFNAYSWGV 672

Query: 511 AVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               +LG+     R + T +E  ++   VK +  G  + A +T GG++YTWG+   G+LG
Sbjct: 673 GDSRRLGHGDCHARELPTKIESLVR--LVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLG 730

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G S ++  P  V AL+D QV  V  GS     +CL
Sbjct: 731 HGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCL 766


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 197/395 (49%), Gaps = 17/395 (4%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H+  +     V  WG G+DG+LGH    D   P  +  L G  + SV+CG   T
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72

Query: 327 CALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A + +  E+Y+WG  + G   +G   S S  L  K    L G+++ ++ACG+ H   V+
Sbjct: 73  TAYSVARTEVYSWGWGDFGR--LGHGNS-SDLLTPKPIKALHGLKIRQIACGDSHCLAVT 129

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G++ ++G    G LG G  ++   P+++++  G+ +K VA G  HTAA+ +       
Sbjct: 130 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------- 182

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G+LF WG    G LG  D   +L+P  V+ +     V  +CG   T+ ++ LG +
Sbjct: 183 ----DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGL 238

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           YT G + +GQLG+   +DR +      L+ + +  IS G  H   LT+ G +Y WG N  
Sbjct: 239 YTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKF 298

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
           GQ+G GD+ +  +P  ++  +D++V  + CG   T A+   +++    + +  Q  +  G
Sbjct: 299 GQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQ--LGHG 356

Query: 626 FRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
               ++            CS ++I ++++ P+ GK
Sbjct: 357 ESVDRNTPMILEALSVDGCSGQQIESSNIDPSSGK 391



 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 171/339 (50%), Gaps = 25/339 (7%)

Query: 192 TRCPKNESHRLVTPTYGSPLIERKDILK-DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    + H +V+ T G+       + + +V  WG G    D G    G+ S      D 
Sbjct: 52  TQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWG----DFGRLGHGNSS------DL 101

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L PK +++   L ++ I+ G  H   VT EGEV  WG  ++G+LG     D   P+ ++ 
Sbjct: 102 LTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA 161

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI+++ V+ G   T A+T+ GE++ WG   +G   +G+R  R   +P+K+  ++DG +
Sbjct: 162 FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL--VPQKV-SSVDGDK 218

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +  VACG  HT  VS+ G L+TYG   +G LGHG+ ++   P  +E+LRG  +  ++ G 
Sbjct: 219 MVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGW 278

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+              GKL+ WG    G++G  D      P  +    D   +Q S
Sbjct: 279 RHTMALT-----------TDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQIS 327

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
           CG   T+ +T    V++ G   +GQLG+ ++ DR+  ++
Sbjct: 328 CGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMI 366



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L G ++ SV CG
Sbjct: 9   RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCG 68

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A     V R        ++++WG  D GRLGH +    L P  +  L      Q 
Sbjct: 69  ADHTTA---YSVART-------EVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQI 118

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 119 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTA 178

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G ++ WG    G LGLGD  +R  P  V ++   ++  V CG   T ++
Sbjct: 179 AVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV 232



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  IS G +H   VT +  VF WG G +G+LGH  ++D + P ++E LS
Sbjct: 323 VIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 371


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 178/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +    T  D LLP  L +     + +I+ GA H  A      E++ WG G  GRLGH
Sbjct: 42  DGQLGHGDTD-DRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGH 100

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ +  L G+ ++ ++CG+    A+T  GE+ +WG N +G   +G   S   
Sbjct: 101 GNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ--LGLGTSEDS 158

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+  T  GV +  VA G  H+  ++ +G+L+ +G G +G LG G+  +   P++V 
Sbjct: 159 LVPQKI-QTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+   K+  VACG  HT ++  +           G L+T+G +  G+LGH + E  L+P 
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSL-----------GGLYTYGWSKYGQLGHGNFEDSLVPQ 266

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L D    Q S G   ++ LT  G +Y  G    GQ+G     DR   V      ++
Sbjct: 267 KLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ 326

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +V++WG+  NGQLG GD+ +R +P  +EAL
Sbjct: 327 KVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H   +     V  WG G+DG+LGH    D   P  +  L    + S++CG   T
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 327 CALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A ++S  E+Y+WG  + G   +G   S    +P+ +   L G+R+ ++ACG+ H   V+
Sbjct: 78  LAYSESRNELYSWGWGDFGR--LGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHCLAVT 134

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G++ ++G    G LG G  ++   P+++++ +G+ +K VA G  H+ AI +       
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGK 504
                G+L+ WG    G LG  D   + +P  V+  VD D  V  +CG   T+ ++ LG 
Sbjct: 188 ----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSS-VDCDKMVMVACGWRHTISVSSLGG 242

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  +      L ++ +  +S G  H   LTS G +Y WG N 
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK 302

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+GD+ +R +P  V+   D++V  + CG   T A+
Sbjct: 303 FGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  HT  + +   + ++G G  G LGHG+  +   P  + +L   ++ S+ACG
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACG 73

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A  +             +L++WG  D GRLGH +    L+P  +  L      Q 
Sbjct: 74  ADHTLAYSESR----------NELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG   ++D  +       +   +K +++G+ H  
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V ++   ++  V CG   T ++
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV 237



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  IS G +H   VT++  VF WG G +G+LGH   +D + PK++E LS
Sbjct: 328 VVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   TV L     V + G    GQLG+    DR +      L  + +  I+ G+ H +
Sbjct: 19  SAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTL 78

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   S   +Y+WG    G+LG G+S +   P  + AL+  +++ + CG S   A+ +   
Sbjct: 79  AYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGE 138

Query: 609 I 609
           +
Sbjct: 139 V 139


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 182/353 (51%), Gaps = 15/353 (4%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
           SA +  V  IS GA H+  +     V  WG G+DG+LGH    D   P  +  L G  V 
Sbjct: 12  SAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVV 71

Query: 318 SVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           SV+CG   T A ++S  ++Y+WG  + G   +G   S   + P+ +   L G+R+ ++AC
Sbjct: 72  SVTCGADHTTAYSESFTQVYSWGWGDFGR--LGHGNSSDLFTPQPI-KALHGLRIKQIAC 128

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G+ H   V+  G++ ++G    G LG G  ++   P+++++ +G+ VK VA G  HTAA+
Sbjct: 129 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 188

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
            +            G+L+ WG    G LG  D   +L+P  V+ +     V+ +CG   T
Sbjct: 189 TE-----------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHT 237

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + ++  G +YT G + +GQLG+   +D         L+E  +  IS G  H   LTS G 
Sbjct: 238 ISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGK 297

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           +Y WG N  GQ+G+GD+ +  +P  V+   +++V  + CG   T A+   +++
Sbjct: 298 LYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNV 350



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 178/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE-GEVFCWGEGKDGRLGH 296
           DG +     + D L P  L +    +V +++ GA H    ++   +V+ WG G  GRLGH
Sbjct: 45  DGQLGHGDAE-DRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGH 103

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ ++ L G+ ++ ++CG+    A+T  GE+ +WG N +G   +G   +   
Sbjct: 104 GNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQ--LGLGTTEDS 161

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+     GV V  VA G  HTA V+  G+L+ +G G +G LG G+  +   P++V 
Sbjct: 162 LVPQKI-QAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS 220

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++ G+K+  VACG  HT ++           +  G L+T+G +  G+LGH D E  L P 
Sbjct: 221 TVEGVKMVKVACGWRHTISV-----------SSSGGLYTYGWSKYGQLGHGDFEDHLTPH 269

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L +    + S G   T+ LT  GK+Y  G    GQ+G     D    V      E+
Sbjct: 270 KLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ 329

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +V++WG+  NGQLG G+S +R  P  +E L
Sbjct: 330 KVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 378



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V +IS G +H   VT+   VF WG G +G+LGH  ++D + PK++E LS
Sbjct: 331 VVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 379


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 178/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +    T  D LLP  L +     + +I+ GA H  A      E++ WG G  GRLGH
Sbjct: 42  DGQLGHGDTD-DRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGH 100

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ +  L G+ ++ ++CG+    A+T  GE+ +WG N +G   +G   S   
Sbjct: 101 GNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ--LGLGTSEDS 158

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+  T  GV +  VA G  H+  ++ +G+L+ +G G +G LG G+  +   P++V 
Sbjct: 159 LVPQKI-QTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+   K+  VACG  HT ++  +           G L+T+G +  G+LGH + E  L+P 
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSL-----------GGLYTYGWSKYGQLGHGNFEDSLVPQ 266

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L D    Q S G   ++ LT  G +Y  G    GQ+G     DR   V      ++
Sbjct: 267 KLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ 326

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +V++WG+  NGQLG GD+ +R +P  +EAL
Sbjct: 327 KVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H   +     V  WG G+DG+LGH    D   P  +  L    + S++CG   T
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 327 CALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A ++S  E+Y+WG  + G   +G   S    +P+ +   L G+R+ ++ACG+ H   V+
Sbjct: 78  LAYSESRNELYSWGWGDFGR--LGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHCLAVT 134

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G++ ++G    G LG G  ++   P+++++ +G+ +K VA G  H+ AI +       
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGK 504
                G+L+ WG    G LG  D   + +P  V+  VD D  V  +CG   T+ ++ LG 
Sbjct: 188 ----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSS-VDCDKMVMVACGWRHTISVSSLGG 242

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  +      L ++ +  +S G  H   LTS G +Y WG N 
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNK 302

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+GD+ +R +P  V+   D++V  + CG   T A+
Sbjct: 303 FGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  HT  + +   + ++G G  G LGHG+  +   P  + +L   ++ S+ACG
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACG 73

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A  +             +L++WG  D GRLGH +    L+P  +  L      Q 
Sbjct: 74  ADHTLAYSESR----------NELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG   ++D  +       +   +K +++G+ H  
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V ++   ++  V CG   T ++
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV 237



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  IS G +H   VT++  VF WG G +G+LGH   +D + PK++E LS
Sbjct: 328 VVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   TV L     V + G    GQLG+    DR +      L  + +  I+ G+ H +
Sbjct: 19  SAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTL 78

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   S   +Y+WG    G+LG G+S +   P  + AL+  +++ + CG S   A+ +   
Sbjct: 79  AYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGE 138

Query: 609 I 609
           +
Sbjct: 139 V 139


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H+  +     V  WG G+DG+LGH    D   P ++  L G+ + SV CG   T
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78

Query: 327 CALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A ++S  ++Y+WG  + G   +G   S   + P+ +   L G+++ ++ACG+ H   V+
Sbjct: 79  IAYSESHTDVYSWGWGDFGR--LGHGNSSDLFTPQPI-RQLHGLKIKQIACGDSHCLAVT 135

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             GQ+ ++G    G LG G  ++   P+++++ +G+ +K VA G  HTAA+ +       
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTE------- 188

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G+L+ WG    G LG  D + +L+P  V+       V  +CG   T+ ++  G +
Sbjct: 189 ----DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGL 244

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           YT G + +GQLG+    D  I      L+  F+  IS G  H   +TS G +Y WG N  
Sbjct: 245 YTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKF 304

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           GQ+G+GD+ +R +P  V+   +++V  + CG   T A+   +++
Sbjct: 305 GQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNV 348



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 176/349 (50%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     Q D L P +L +   L++ ++  GA H  A      +V+ WG G  GRLGH
Sbjct: 43  DGQLGHGDAQ-DRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGH 101

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ +  L G+ ++ ++CG+    A+T  G++ +WG N +G   +G   +   
Sbjct: 102 GNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQ--LGLGTTEDS 159

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+     GV +  VA G  HTA V+  G+L+ +G G +G LG G+ ++   P++V 
Sbjct: 160 LVPQKI-QAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS 218

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
              G K+  VACG  HT ++           +  G L+T+G +  G+LGH D    L+P 
Sbjct: 219 LPHGEKMVMVACGWRHTISV-----------SSSGGLYTYGWSKYGQLGHGDYADHLIPH 267

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L      Q S G   T+ +T  GK+Y  G    GQ+G     DRS  V      E+
Sbjct: 268 QLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ 327

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +V++WG+  NGQLG G+  +R  P  ++AL
Sbjct: 328 KVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKAL 376



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  H+  + +   + T+G G  G LGHG+ Q+   P  + +L GL++ SV CG
Sbjct: 15  RVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICG 74

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A  +   D          +++WG  D GRLGH +      P  + +L      Q 
Sbjct: 75  ADHTIAYSESHTD----------VYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQI 124

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 125 ACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTA 184

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD ++R  P  V      ++  V CG   T ++
Sbjct: 185 AVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISV 238



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 10/91 (10%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
           V   LP  LE  V+L    IS G +H   VT+   VF WG G +G+LG+    D + P +
Sbjct: 319 VQVKLP--LEQKVIL----ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVI 372

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           ++ LS       SCG+    ++  S    TW
Sbjct: 373 IKALS----VDGSCGQHIESSMVDSSSGKTW 399


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L   L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIQALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +A G  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3267

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3268 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3965 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4015

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 4076 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4132

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4133 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4183

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4244 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4299

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4300 LQGKKVNRVACGSAHTLAWSTSKPASAG 4327



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L++ L    ++ ++ G   +  LT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3243

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3244 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3303

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3304 VQG-LEGQKITRVACGSSHSVAWTT 3327



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 435 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 538

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H  VLT    V++WG N   Q        +  PT    L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLVLTEDSEVHSWGSNDQCQ 741



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3953 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4009

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 4060

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 33/282 (11%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2961 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 3017

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 3066

Query: 451  GKLFTWGDADKGRLGHV-----DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            GK+F+WG+ D G+LGH      D  R +      R+ D  +     G   +  LT  G++
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAY-----GSSHSAPLTSSGEL 3121

Query: 506  YTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWG 3179

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4127 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4178

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4179 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4232

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4233 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4290

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4291 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 34/218 (15%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 651 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT----FGVLGHGNLQNVSQPKEVES 417
           L + L G +V  VA G  H  +++   ++ ++G       F  LG        +P     
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLG----VTKPEPTAFPG 758

Query: 418 LRGLKVKSVACGP-----------WHTAAIVDIMVDRC 444
           L    +  +ACGP           W     V  +VD C
Sbjct: 759 LDSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G      LT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGS 736

Query: 341 NN--HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+     D +G  +      P      LD   +  +ACG
Sbjct: 737 NDQCQHFDTLGVTKPEPTAFP-----GLDSKHIVGIACG 770



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 4004 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4119

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 4168


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 181/357 (50%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2893 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 2952

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L   L  
Sbjct: 2953 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIQALKT 3009

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +A G  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3010 KRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3069

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3070 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3118

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
             Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG L+ + +  ++ G+
Sbjct: 3119 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3177

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS + A
Sbjct: 3178 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3875 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3925

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3926 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3985

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3986 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4042

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4043 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4093

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4153

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4154 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4209

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4210 LQGKKVNRVACGSAHTLAWSTSKPASAG 4237



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 20/325 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 2928 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2987

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L++ L    ++ ++ G   +  LT SGE+YTWG   +G    G+ 
Sbjct: 2988 GKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3047

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3048 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3104

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            + P+ +E L G  V  + CG   + A+              G ++TWG  D  RLGH   
Sbjct: 3105 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGKGDYFRLGHGSD 3153

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+VY  G   HGQ GN     +R  T+
Sbjct: 3154 VHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTL 3213

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTS 553
            V+G L+ + +  ++ GS H    T+
Sbjct: 3214 VQG-LEGQKITRVACGSSHSVAWTT 3237



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  ++   K   ++++ G V+              N D+  
Sbjct: 345 KYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLA 394

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 395 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 448

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 449 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 508

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 509 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 557

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 558 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 616

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H  VLT    V++WG N   Q        +  PT    L  + +  
Sbjct: 617 LQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVG 676

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 677 IACGPAQSFA-----------WSSCSEWSIGLRVPF 701



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  V+C E +   L+++G +YT  +N
Sbjct: 335 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN 389

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 390 -------------SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 435

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 436 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 484

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 485 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 544

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 545 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 604

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 605 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLVLTEDSEVHSWGSNDQCQ 651



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3863 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3919

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 3920 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 3970

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4030

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 4031 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4090

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 4091 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4124



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 33/282 (11%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G++++ 
Sbjct: 2871 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYSC 2927

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 2928 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VD 2976

Query: 451  GKLFTWGDADKGRLGHV-----DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            GK+F+WG+ D G+LGH      D  R +      R+ D  +     G   +  LT  G++
Sbjct: 2977 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAY-----GSSHSAPLTSSGEL 3031

Query: 506  YTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG
Sbjct: 3032 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWG 3089

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3090 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3131



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR++    GS   +   +  D  +W  G   GD G 
Sbjct: 4037 HSDSEDQLKPKLVEA------LQGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 4088

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 4089 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4142

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 4143 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4200

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4201 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4231



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 34/218 (15%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 501 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 560

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 561 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 612

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT----FGVLGHGNLQNVSQPKEVES 417
           L + L G +V  VA G  H  +++   ++ ++G       F  LG        +P     
Sbjct: 613 LLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLG----VTKPEPTAFPG 668

Query: 418 LRGLKVKSVACGP-----------WHTAAIVDIMVDRC 444
           L    +  +ACGP           W     V  +VD C
Sbjct: 669 LDSKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 706



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 537 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 586

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G      LT+  E+++WG 
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGS 646

Query: 341 NN--HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+     D +G  +      P      LD   +  +ACG
Sbjct: 647 NDQCQHFDTLGVTKPEPTAFP-----GLDSKHIVGIACG 680



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K   G   TA + T  ++F
Sbjct: 2816 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTPGLESTATIRT--KVF 2873

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2874 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2922

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K+++ G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 2923 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 2982

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 2983 GEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRL 3042

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3043 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3079



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 3863 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3913

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
                GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 3914 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3971

Query: 505  VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 3972 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 4029

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
               G+LG  DS+++  P  VEAL+  +V  + CGS     +CL
Sbjct: 4030 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4072


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 179/350 (51%), Gaps = 17/350 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISL-GAKHAALVTKEG-EVFCWGEGKDGRLG 295
           DG +     + D  +P LL    +  + ++ + GA H    + E  +++ WG G  GRLG
Sbjct: 49  DGQLGHGDAE-DRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLG 107

Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
           H  + DV  P+ +E L GI ++ ++CG+    A+T +G++++WG N +G   +G   +  
Sbjct: 108 HGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQ--LGLGNTED 165

Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
             LP+K+    +GV V  +A G  HTA +   G L+ +G G +G LG G+  +   P++V
Sbjct: 166 SLLPQKIH-AFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKV 224

Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
            S+ G K+  VACG  HT  +           +  G L+T+G +  G+LGH D E  L+P
Sbjct: 225 SSVEGEKMVLVACGWRHTVTV-----------SSSGDLYTYGWSKYGQLGHGDFEDHLVP 273

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
             +  L D    Q + G   T+ + G GK+Y  G    GQ+G     D    V      E
Sbjct: 274 HKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDE 333

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           + V  ++ G  H   LT   +V++WG+  +GQLG G+  +R TP  ++AL
Sbjct: 334 QKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDAL 383



 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 26/366 (7%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+  E  V L    +S GA H+  +     V  WG G+DG+LGH    D   P L 
Sbjct: 11  DEEVPEAPEQTVAL----VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTL- 65

Query: 309 ECLSGINVQSVS----CGEFQTCALT-KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
             LSG +V  ++    CG   T A + +  ++Y+WG  + G   +G   S   + P+ + 
Sbjct: 66  --LSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGR--LGHGNSSDVFHPQPI- 120

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           + L G+++ ++ACG+ H   V+ +GQ+ ++G    G LG GN ++   P+++ +  G+ V
Sbjct: 121 EALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCV 180

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
           K +A G  HTAAI++            G L+ WG    G LG  D   +L+P  V+ +  
Sbjct: 181 KMIAAGAEHTAAILE-----------DGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEG 229

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              V  +CG   TV ++  G +YT G + +GQLG+   +D  +      LK+ F+  I+ 
Sbjct: 230 EKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAG 289

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  H   +   G +Y WG N  GQ+G+ D+ +  +P  V    +++V  V CG   T A+
Sbjct: 290 GWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLAL 349

Query: 604 CLHKSI 609
             +K++
Sbjct: 350 TENKNV 355



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  ++ G +H   +T+   VF WG G  G+LGH   +D + PK+++ LS
Sbjct: 336 VAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALS 384


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 26/385 (6%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V +WG  +   D  G + GS    K +V    P   ES   L   +I+ G+K   +V+ +
Sbjct: 2987 VFVWG--LNDKDQLGGLKGS----KVKV----PVYSESLTALKPIHIAGGSKSLFIVSYD 3036

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYTW 338
            G+++  GEG +GRLG   + +V+ P  +  L+   ++ V+   G     ALT  G++++W
Sbjct: 3037 GKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSW 3096

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G    G   +G     S   P K+ + L   R+  +ACG  H+A +S++G+LFT+G G +
Sbjct: 3097 GEGEDGK--LGHDNRLSLDRP-KMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEY 3153

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHG+     +PK V++L G  +  VACG      +         + +  G +F+WGD
Sbjct: 3154 GRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTL---------ALSAEGLVFSWGD 3204

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             D G+LG    E   +P  + RL         CG   ++ LT  G+VYT G   + +LG+
Sbjct: 3205 GDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGH 3264

Query: 519  PKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               +  R  T+VE  L E+ +  ++ G+ H    T  G VY WG N +GQ G G      
Sbjct: 3265 GSDQHVRKPTLVE-SLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNR 3323

Query: 578  TPTFVEALRDRQVESVVCGSSITAA 602
             P+ V  L   +V  V CGSS + A
Sbjct: 3324 KPSLVLNLEGVRVNRVACGSSHSIA 3348



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 26/349 (7%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTC 327
            G +    VT +G+V+  G G  GRLG      +  P L+E +  I ++  +V+ G     
Sbjct: 4009 GEQTLLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCL 4068

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            AL+  G++Y+WG  + G    G +    H    +L D L G  +  +ACG  H+A V+  
Sbjct: 4069 ALSTDGKVYSWGEGDDGKLGHGNKNGCDH---PQLIDALQGKEIVDIACGGAHSAAVTAG 4125

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCK 445
            G+++T+G G +G LGHG+ ++  +PK VE+L G KV  +ACG     T  I D       
Sbjct: 4126 GEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITD------- 4178

Query: 446  SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                   +++WGD D G+LG    +   +P  +  L     V+  CG   +V LT  G V
Sbjct: 4179 ----DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSV 4234

Query: 506  YTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            YT G   + +LG+   +     + I  ++GK     +  I++GS H    +  G V+TWG
Sbjct: 4235 YTWGKGDYHRLGHGSDEHVRHPKKIAALQGKK----IICIATGSLHCVACSDLGEVFTWG 4290

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
             N  GQLG G       P  V  L+ + +  V CGS+ + A   +KS S
Sbjct: 4291 DNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTS 4339



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 150/305 (49%), Gaps = 26/305 (8%)

Query: 251  LLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
            L P LLES   + ++ +++  G KH   ++ +G+V+ WGEG DG+LGH        P+L+
Sbjct: 4042 LTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLI 4101

Query: 309  ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            + L G  +  ++CG   + A+T  GEIYTWG   +G   +G   S     P KL +TL G
Sbjct: 4102 DALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGR--LGHGDSEDQMKP-KLVETLIG 4158

Query: 369  VRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             +V  +AC  G+  T  ++    ++++GDG +G LG G       P ++ESL GL V  V
Sbjct: 4159 FKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKV 4218

Query: 427  ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
             CG   + A+              G ++TWG  D  RLGH   E    P  +  L     
Sbjct: 4219 ECGSQFSVALTR-----------SGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKI 4267

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGIS 542
            +  + G +  V  + LG+V+T G    GQLG    N   + R +  ++GK     +  ++
Sbjct: 4268 ICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGK----NINRVA 4323

Query: 543  SGSYH 547
             GS H
Sbjct: 4324 CGSAH 4328



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 19/340 (5%)

Query: 263  DVQNISLGAKHAALVTKE-GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
            +V+ +S  + H+ L +    +VF WG     +LG      V  P   E L+ +    ++ 
Sbjct: 2966 EVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAG 3025

Query: 322  GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEW 379
            G      ++  G++Y  G   +G   +G   S +   P +L  +L+   + KVA   G  
Sbjct: 3026 GSKSLFIVSYDGKLYACGEGTNGR--LGLGHSNNVATPCQL-TSLNQYVIKKVAVHSGGK 3082

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            H   ++  G++F++G+G  G LGH N  ++ +PK +E+L+  +++ +ACG  H+AAI   
Sbjct: 3083 HAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAI--- 3139

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTV 497
                    +  G+LFTWG  + GRLGH D   +L P  V  L+    VQ +CG     T+
Sbjct: 3140 --------SSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 498  GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
             L+  G V++ G    G+LG   ++   I     +L    V  I  G+     LT  G V
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQV 3251

Query: 558  YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
            YTWGK    +LG G  Q    PT VE+L ++++  V  G+
Sbjct: 3252 YTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGA 3291



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 219/498 (43%), Gaps = 86/498 (17%)

Query: 132 SPSLSLSERCFSDGLSYSSD--SFYSSESSSSQIQNLSNIITPSSPHMETENFMKWELNY 189
           +P + L +R F + LS  SD  S+   E SSS++          SP   TE F+++    
Sbjct: 359 APLVPLLKR-FQNLLSLKSDTSSYIFEEFSSSKV----------SP---TECFLRY---- 400

Query: 190 ADTRCPKNES----------------HRLVTPTYGSPLIERKD----ILKDVMIWGEGVL 229
              + P+NE                  RL  P    P+  +      I ++VM WG    
Sbjct: 401 --CQLPENEDVSVDLRQSAVIIMSYLDRLAAPYSPMPVFGKNQLNGTIYQEVMAWGW--- 455

Query: 230 GGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG 289
                      +S +        P+  +S   L V+ I    +   ++T  G+V+     
Sbjct: 456 -----------LSWSSCHDLGTSPQSCDSIRELGVKQIVCAERWLLILTLTGKVYI---- 500

Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF--QTCALTKSGEIYTWGHNNHGADL 347
                    + +  CP+ +E   G  +  ++       + AL+  G++Y+WG+ + G   
Sbjct: 501 ------MYYSSETQCPEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLG 554

Query: 348 VGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ 407
            G+  SR    P K+ + L G  V  ++CG  ++A V++SG+++T+G G +G LGHG  +
Sbjct: 555 HGDNNSRDQ--PTKITE-LVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSE 611

Query: 408 NVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + + P  V  L+   +  +ACG     T A+ +            G +F+WGD   G+LG
Sbjct: 612 DHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNT-----------GLVFSWGDGGYGKLG 660

Query: 466 HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-R 524
               +    P  + +L D +  +  CG   ++ LT  G VYT G   + +LG+      R
Sbjct: 661 TGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVR 720

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
              +VEG L  + +K ++ GS HV  LT  G VY WG+N NGQ+G         PT +  
Sbjct: 721 FPKLVEG-LNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTL 779

Query: 585 LRDRQVESVVCGSSITAA 602
           L+ + +  + CG + + A
Sbjct: 780 LQGKNIVDIDCGPNQSIA 797



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 161/389 (41%), Gaps = 75/389 (19%)

Query: 332  SGEIYTWGHNNHG------------------------ADLVGERRS-------------- 353
            SG IY WGHN+ G                          LVG  ++              
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATG 4026

Query: 354  -----------RSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
                           L   L +++  + + KVA   G  H   +ST G+++++G+G  G 
Sbjct: 4027 YGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGK 4086

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHGN      P+ +++L+G ++  +ACG  H+AA+             GG+++TWG   
Sbjct: 4087 LGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAV-----------TAGGEIYTWGKGR 4135

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
             GRLGH D E ++ P  V  L+ F  +  +CG     T+ +T    V++ G   +G+LG 
Sbjct: 4136 YGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4195

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +    I +    L    V  +  GS     LT  GSVYTWGK    +LG G  +    
Sbjct: 4196 GGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRH 4255

Query: 579  PTFVEALRDRQVESVVCGS-SITAAICLHKSISVGD----------QSSCSQCRMPFGFR 627
            P  + AL+ +++  +  GS    A   L +  + GD           ++  + R+    +
Sbjct: 4256 PKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQ 4315

Query: 628  RKKHNCYNCGLHFCSACSTKKIINASLTP 656
             K  N   CG     A ST K  +A+  P
Sbjct: 4316 GKNINRVACGSAHSLAWSTNKSTSATHLP 4344



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 30/306 (9%)

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           + P+  + +  + V+ + C E     LT +G++Y   +++                P ++
Sbjct: 466 TSPQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSSETQ------------CPEQI 513

Query: 363 FDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            +  DG  +SK+A    G+ H+  +S  G ++++G+G  G LGHG+  +  QP ++  L 
Sbjct: 514 -EGFDGKEISKLAAHADGK-HSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELV 571

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
           G  V  ++CG  ++AA+              G+++TWG  + GRLGH   E   +PT V 
Sbjct: 572 GKNVIHISCGATYSAAVTS-----------SGEVYTWGRGNYGRLGHGTSEDHTVPTLVV 620

Query: 480 RLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
            L D+  V  +CG     T+ +T  G V++ G   +G+LG   +       +  KL++  
Sbjct: 621 GLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIE 680

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V  +  GS     LT  GSVYTWGK  N +LG G       P  VE L  + ++ V  GS
Sbjct: 681 VARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGS 740

Query: 598 SITAAI 603
               A+
Sbjct: 741 GHVLAL 746



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 5/189 (2%)

Query: 249  DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
            D + PKL+E+ +   V +I+ G+  A    +T +  V+ WG+G  G+LG   +     P 
Sbjct: 4146 DQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPM 4205

Query: 307  LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
             +E L+G+ V  V CG   + ALT+SG +YTWG  ++     G      H  P+K+   L
Sbjct: 4206 KIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRH--PKKI-AAL 4262

Query: 367  DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             G ++  +A G  H    S  G++FT+GD   G LG G +  + +P+ V +L+G  +  V
Sbjct: 4263 QGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRV 4322

Query: 427  ACGPWHTAA 435
            ACG  H+ A
Sbjct: 4323 ACGSAHSLA 4331



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 20/275 (7%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    ++L  ++   +A G     IVS  G+L+  
Sbjct: 2986 KVFVWGLND--KDQLGGLKGSKVKVP-VYSESLTALKPIHIAGGSKSLFIVSYDGKLYAC 3042

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGG 451
            G+GT G LG G+  NV+ P ++ SL    +K VA   G  H  A+            + G
Sbjct: 3043 GEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMAL-----------TLDG 3091

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            K+F+WG+ + G+LGH +      P  +  L        +CG   +  ++  G+++T G  
Sbjct: 3092 KVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLG 3151

Query: 512  VHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS--YHVAVLTSGGSVYTWGKNANGQL 568
             +G+LG+          +V+  L    V+ ++ GS       L++ G V++WG    G+L
Sbjct: 3152 EYGRLGHGDNLTQLRPKLVKALLGHHIVQ-VACGSRDAQTLALSAEGLVFSWGDGDFGKL 3210

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G G S+  + P  +E L    V  + CG+  + A+
Sbjct: 3211 GRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLAL 3245



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 17/169 (10%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  +G            +P  +E    L V  I  GA+ +  +TK 
Sbjct: 3199 VFSWGDGDFGKLGRGGSEGCD----------IPHNIERLNGLGVCMIECGAQFSLALTKF 3248

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G+V+ WG+G   RLGH  +  V  P LVE LS   +  V+ G       T  G++Y WG 
Sbjct: 3249 GQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGD 3308

Query: 341  NNHGADLVGERRSRSHWLPRK--LFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+HG     ++ + +  + RK  L   L+GVRV++VACG  H+   +TS
Sbjct: 3309 NDHG-----QQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTS 3352



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 127/294 (43%), Gaps = 24/294 (8%)

Query: 323  EFQTCALTKSGEIYTWGHN--NHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVAC--- 376
            EF +C      + +  G N   H   + G++R  +  LP  + F   D   + +V     
Sbjct: 2913 EFYSCIEIAIKQCWNGGINCKIHSLLITGKKRLVNDELPLNVSFLATDYEEIPEVKTLSE 2972

Query: 377  GEWHTAIVSTS-GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
               H+ + S S  ++F +G      LG      V  P   ESL  LK   +A G   + +
Sbjct: 2973 TSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGG---SKS 3029

Query: 436  IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGR 493
            +  +  D        GKL+  G+   GRLG         P  +T L  +    V    G 
Sbjct: 3030 LFIVSYD--------GKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGG 3081

Query: 494  MLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
               + LT  GKV++ G    G+LG  N  + DR   ++E  LK + ++ I+ GS H A +
Sbjct: 3082 KHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRP-KMIEA-LKSKRIRDIACGSSHSAAI 3139

Query: 552  TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            +S G ++TWG    G+LG GD+  +  P  V+AL    +  V CGS     + L
Sbjct: 3140 SSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLAL 3193



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            PKL+E      ++ +++G+ H   +T +GEV+ WG   +G++G     +VS P L+  L
Sbjct: 721 FPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLL 780

Query: 312 SGINVQSVSCGEFQTCALTKS 332
            G N+  + CG  Q+ A + S
Sbjct: 781 QGKNIVDIDCGPNQSIAWSSS 801


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 175/339 (51%), Gaps = 18/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G  H+  +     V  WG G+DG+LGH    D   P  +  L    + SV CG   T
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHT 79

Query: 327 CALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A ++S  E+Y+WG  + G   +G   S   ++P+ +   L G+R+ ++ACG+ H   V+
Sbjct: 80  LAYSESKVEVYSWGWGDFGR--LGHGNSSDLFIPQPI-RALQGLRIKQIACGDSHCLAVT 136

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G++ ++G    G LG G  ++   P+++++ +G+ +K VA G  H+ AI +       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 189

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGK 504
                G+L+ WG    G LG  D   + +P  V+  VD D  V  +CG   T+ ++  G+
Sbjct: 190 ----NGELYGWGWGRYGNLGLGDRNDRCIPEKVS--VDCDKMVLVACGWRHTISVSSSGE 243

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   KD  +        ++ +  +S G  H   LT+GG +Y WG N 
Sbjct: 244 LYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNK 303

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+GD+ +R +P  V+   D++V  + CG   T A+
Sbjct: 304 FGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAV 342



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 178/349 (51%), Gaps = 17/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +    T  D LLP  L +     + ++  GA H  A    + EV+ WG G  GRLGH
Sbjct: 44  DGQLGHGDTD-DRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGH 102

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ +  L G+ ++ ++CG+    A+T  GE+ +WG N +G   +G   +   
Sbjct: 103 GNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ--LGLGTTEDS 160

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+  T  GV +  VA G  H+  ++ +G+L+ +G G +G LG G+  +   P++V 
Sbjct: 161 LVPQKI-QTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKV- 218

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+   K+  VACG  HT ++           +  G+L+T+G +  G+LGH D +  L+P 
Sbjct: 219 SVDCDKMVLVACGWRHTISV-----------SSSGELYTYGWSKYGQLGHGDCKDHLVPH 267

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +    D    Q S G   T+ LT  G++Y  G    GQ+G     DR   V      ++
Sbjct: 268 KLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ 327

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +VY+WG+  NGQLG+GD+ +   P  +EAL
Sbjct: 328 KVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEAL 376



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 11/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  H+  + +   + ++G G  G LGHG+  +   P ++ +L   ++ SV CG
Sbjct: 16  RVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCG 75

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A  +  V+          +++WG  D GRLGH +     +P  +  L      Q 
Sbjct: 76  ADHTLAYSESKVE----------VYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQI 125

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H  
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSV 185

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V    D+ V  V CG   T ++
Sbjct: 186 AITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMV-LVACGWRHTISV 238



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+    DR +      L  + +  +  G+ H +
Sbjct: 21  SAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTL 80

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   S   VY+WG    G+LG G+S +   P  + AL+  +++ + CG S   A+ +   
Sbjct: 81  AYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGE 140

Query: 609 I 609
           +
Sbjct: 141 V 141



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  IS G +H   VT++  V+ WG G +G+LG    +D + PK++E LS
Sbjct: 329 VAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEALS 377


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 180/357 (50%), Gaps = 21/357 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVEC 310
            +P L E    L VQ I+ G+K    V+ +G+VF  GE  +GRLG   ++ +V+ P+ +E 
Sbjct: 2444 VPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIEN 2503

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ VS   G     ALT  G++++WG    G    G R +  H    KL DT   
Sbjct: 2504 LSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDH---PKLIDTFKS 2560

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
              V  ++CG  H+A + +SG+L+T+G G +G LGHG+     +PK+V+S    +V  +AC
Sbjct: 2561 SCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIAC 2620

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +++WGD D G+LG    E   +P  V +L     
Sbjct: 2621 GSRDAQTLALTD-----------DGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGV 2669

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGS 545
             + +CG   ++ L+  G V+T G   + +LG+      R   +V+G L+ + +  ++ G+
Sbjct: 2670 CKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDG-LRGKKIVDVAVGA 2728

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H   +T  G V+ WG N +GQ G   +     P  V  L  +++  V CGSS + A
Sbjct: 2729 LHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVACGSSHSIA 2785



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 184/367 (50%), Gaps = 22/367 (5%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            LP+ +E+   +    I  G +    VT EG+V+  G G  GRLG      V+  K++E L
Sbjct: 3377 LPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESL 3436

Query: 312  SGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
              + V+ V+   G     AL+  G++Y+WG  + G    G R S     PR + + L G 
Sbjct: 3437 QHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDR--PR-VIEALRGK 3493

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
             V  ++CG  H+A ++ + +L+T+G G +G LGHG+ ++   PK VE+LRG +V  VACG
Sbjct: 3494 GVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACG 3553

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                A  + +  D C        +++WGD D G+LG    +   +P  V  L+     + 
Sbjct: 3554 S-GDAQTLCLTDDDC--------VWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKV 3604

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGS 545
             CG   +V LT  G VYT G   + +LG    +   + + +  ++GK     V  I++GS
Sbjct: 3605 ECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKK----VITIATGS 3660

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             H    T  G VYTWG N  GQLG G +     P  V AL+ +++  V CGS+ T A   
Sbjct: 3661 LHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWST 3720

Query: 606  HKSISVG 612
             K ++ G
Sbjct: 3721 CKPVNAG 3727



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 161/319 (50%), Gaps = 20/319 (6%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G + +G +       +  +P+ +E+     V+ +S+  G +HA  +T EG++F WGEG+D
Sbjct: 2479 GESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGED 2538

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   PKL++      V+ +SCG   + A+  SGE+YTWG   +G   +G  
Sbjct: 2539 GKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGR--LGHG 2596

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             + +H  P+K+  +    RV  +ACG  +  T  ++  G ++++GDG FG LG G  +  
Sbjct: 2597 DNYTHLKPKKV-QSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGC 2655

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            S P  VE L+G  V  VACG   + A+           +  G ++TWG  D  RLGH + 
Sbjct: 2656 SVPNPVEKLQGQGVCKVACGAQFSLAL-----------STSGLVWTWGKGDYYRLGHGND 2704

Query: 470  ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-DRSITV 528
                 P  V  L     V  + G +  + +T  G+V+  G   HGQ GN     +R   +
Sbjct: 2705 THVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQL 2764

Query: 529  VEGKLKEEFVKGISSGSYH 547
            V G L+ + +  ++ GS H
Sbjct: 2765 VNG-LEGQKITRVACGSSH 2782



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 151/315 (47%), Gaps = 23/315 (7%)

Query: 305 PKLVECLSG----INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           P  +ECLS     + V + + G+    ALT+ GE+Y+WG  + G    G+   R      
Sbjct: 5   PAELECLSRKCEIVQVVTHTDGK-HFLALTREGEVYSWGSGDGGKLGHGDTSPREE---P 60

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            L   L G +V +++CG  H+A V++ G+L+T+G G +G LGHG+ ++   P  V  LRG
Sbjct: 61  TLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRG 120

Query: 421 LKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
             +  VACG    HT A  D            G +++WGD D G+LG    +    P  +
Sbjct: 121 HHIIDVACGSGDAHTLAAAD-----------DGTVWSWGDGDYGKLGRGGSDGCKNPKSI 169

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEF 537
            RL      +  CG   ++ LT  G V+T G     +LG+      R   +VE  L  + 
Sbjct: 170 ERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEA-LDGKH 228

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V  +S GS H   LT  G VY WG+N  GQLG  D Q R  PT V  L  + +  + CG 
Sbjct: 229 VVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGP 288

Query: 598 SITAAICLHKSISVG 612
           + + A       SVG
Sbjct: 289 AQSFAWSCAGQWSVG 303



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 146/282 (51%), Gaps = 28/282 (9%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
            DV  WGEG          DG +   N+   D   P+++E+     V +IS G  H+A +T
Sbjct: 3461 DVYSWGEGD---------DGKLGHGNRNSCDR--PRVIEALRGKGVIDISCGGSHSACIT 3509

Query: 279  KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIY 336
            +  E++ WG+G+ GRLGH  + D   PK+VE L G  V  V+C  G+ QT  LT    ++
Sbjct: 3510 QNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVW 3569

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S    +P K+ ++L G+ VSKV CG   +  ++ SG ++T+G G
Sbjct: 3570 SWGDGDYGK--LGRGGSDGCKIPMKV-ESLIGLGVSKVECGSQFSVALTRSGAVYTWGKG 3626

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +  LGHG   +V +PK V +L+G KV ++A G  H  A  D            G+++TW
Sbjct: 3627 DYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDT-----------GEVYTW 3675

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
            GD D+G+LG         P  VT L      + +CG   T+ 
Sbjct: 3676 GDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIA 3717



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 130/276 (47%), Gaps = 16/276 (5%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
            KH   +T+EGEV+ WG G  G+LGH        P LV  L+G  V  +SCG   + A+T
Sbjct: 26  GKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT 85

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSG 388
             GE+YTWG  N+G   +G   S    +P  L   L G  +  VAC  G+ HT   +  G
Sbjct: 86  SEGELYTWGRGNYGR--LGHGSSEDQLVP-VLVSGLRGHHIIDVACGSGDAHTLAAADDG 142

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++++GDG +G LG G       PK +E L+GL V  V CG   + A+            
Sbjct: 143 TVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR---------- 192

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G ++TWG  +  RLGH   +    P  V  L     V  S G +  + LT  G+VY  
Sbjct: 193 -DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCW 251

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
           G    GQLG+   + R    +   L  + + GI+ G
Sbjct: 252 GRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 186/410 (45%), Gaps = 35/410 (8%)

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G ++ WG    G+LG      V  P+ +E L+ I    +  GE    A+T  G++Y  G+
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 3413

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTF 398
             + G   +G   + +     K+ ++L  V V KVA   G  H   +S  G ++++G+G  
Sbjct: 3414 GHGGRLGLGGTDTVTS---IKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDD 3470

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN  +  +P+ +E+LRG  V  ++CG  H+A I               +L+TWG 
Sbjct: 3471 GKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQ-----------NHELYTWGK 3519

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQL 516
               GRLGH D E +LLP  V  L     +  +CG     T+ LT    V++ G   +G+L
Sbjct: 3520 GRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKL 3579

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
            G   +    I +    L    V  +  GS     LT  G+VYTWGK    +LG G     
Sbjct: 3580 GRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHV 3639

Query: 577  ETPTFVEALRDRQVESVVCGS-SITAAICLHKSISVGDQ----------SSCSQCRMPFG 625
              P  V AL+ ++V ++  GS    A+    +  + GD           ++ ++ R+   
Sbjct: 3640 RRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTA 3699

Query: 626  FRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
             + KK +   CG     A ST K +NA   P++          YNHLQ I
Sbjct: 3700 LQGKKISRVACGSAHTIAWSTCKPVNAGRLPDE------VPMEYNHLQHI 3743



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 17/320 (5%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +VF WG     +LG      +  P L E +  + VQ ++ G     A++  G+++  G +
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGES 2481

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
             +G   +G   S +  +PR++ + L    V KV+   G  H   ++  G+LF++G+G  G
Sbjct: 2482 TNGRLGLGPL-SANVTVPRQI-ENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDG 2539

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHGN  N   PK +++ +   V+ ++CG  H+AAI+             G+L+TWG  
Sbjct: 2540 KLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILS-----------SGELYTWGLG 2588

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLG 517
            + GRLGH D    L P  V        +  +CG     T+ LT  G V++ G    G+LG
Sbjct: 2589 EYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLG 2648

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               ++  S+     KL+ + V  ++ G+     L++ G V+TWGK    +LG G+     
Sbjct: 2649 RGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVR 2708

Query: 578  TPTFVEALRDRQVESVVCGS 597
             P  V+ LR +++  V  G+
Sbjct: 2709 KPQIVDGLRGKKIVDVAVGA 2728



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 135/275 (49%), Gaps = 26/275 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG G  GG +G   D S  +  T V  L  K         V  IS G+ H+A VT 
Sbjct: 37  EVYSWGSGD-GGKLGHG-DTSPREEPTLVTGLAGK--------QVIRISCGSTHSAAVTS 86

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
           EGE++ WG G  GRLGH  + D   P LV  L G ++  V+C  G+  T A    G +++
Sbjct: 87  EGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWS 146

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  ++G   +G   S     P+ + + L G+ V KV CG   +  ++  G ++T+G G 
Sbjct: 147 WGDGDYGK--LGRGGSDGCKNPKSI-ERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGE 203

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
              LGHG   +V  PK VE+L G  V  V+ G  H  A+ D            G+++ WG
Sbjct: 204 GFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTD-----------AGEVYCWG 252

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
             D+G+LG +D + +  PT V+ L     V  +CG
Sbjct: 253 RNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%)

Query: 251  LLPKLLESAVMLDVQNISLGAKHAALV--TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
            L PK ++S     V +I+ G++ A  +  T +G V+ WG+G  G+LG   +   S P  V
Sbjct: 2602 LKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPV 2661

Query: 309  ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLF 363
            E L G  V  V+CG   + AL+ SG ++TWG  +     HG D        +H    ++ 
Sbjct: 2662 EKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGND--------THVRKPQIV 2713

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
            D L G ++  VA G  H   V+ SGQ+F +GD   G  G+       +P+ V  L G K+
Sbjct: 2714 DGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKI 2773

Query: 424  KSVACGPWHTAA 435
              VACG  H+ A
Sbjct: 2774 TRVACGSSHSIA 2785



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 27/279 (9%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P  L + +  ++V ++A G      VS  G++F  
Sbjct: 2422 KVFVWGLNDK--DQLGGLKGSKIKVP-VLSEFIGALKVQQIAGGSKTLFAVSHDGKVFAC 2478

Query: 394  GDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVK--SVACGPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G L  NV+ P+++E+L    V+  SV  G  H  A+            I 
Sbjct: 2479 GESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALT-----------IE 2527

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GKLF+WG+ + G+LGH +      P  +           SCG   +  +   G++YT G 
Sbjct: 2528 GKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGL 2587

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEF----VKGISSGS--YHVAVLTSGGSVYTWGKNA 564
              +G+LG+      + T ++ K  + F    V  I+ GS       LT  G+V++WG   
Sbjct: 2588 GEYGRLGH----GDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGD 2643

Query: 565  NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G+LG G S+    P  VE L+ + V  V CG+  + A+
Sbjct: 2644 FGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLAL 2682



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 84/166 (50%), Gaps = 13/166 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  +ES + L V  +  G++ +  +T+ 
Sbjct: 3568 VWSWGDGDYGKLGRGGSDG----------CKIPMKVESLIGLGVSKVECGSQFSVALTRS 3617

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH V+  V  PK V  L G  V +++ G     A T +GE+YTWG 
Sbjct: 3618 GAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGD 3677

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            N+ G   +G+  + +   PR L   L G ++S+VACG  HT   ST
Sbjct: 3678 NDEGQ--LGDGTTNAIARPR-LVTALQGKKISRVACGSAHTIAWST 3720



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 87/201 (43%), Gaps = 28/201 (13%)

Query: 191 DTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           D  C   ++H L     G+           V  WG+G  G    G  DG  +        
Sbjct: 125 DVACGSGDAHTLAAADDGT-----------VWSWGDGDYGKLGRGGSDGCKN-------- 165

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
             PK +E    L V  +  GA+ +  +T++G V+ WG+G+  RLGH     V  PKLVE 
Sbjct: 166 --PKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEA 223

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDG 368
           L G +V  VS G     ALT +GE+Y WG N+ G   D+  + R         L   L  
Sbjct: 224 LDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEP-----TLVSGLAS 278

Query: 369 VRVSKVACGEWHTAIVSTSGQ 389
             +  +ACG   +   S +GQ
Sbjct: 279 KGIVGIACGPAQSFAWSCAGQ 299



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 120/302 (39%), Gaps = 30/302 (9%)

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++F +G      LG      +  P   E +  LKV+ +A G     A+           +
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAV-----------S 2470

Query: 449  IGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKV 505
              GK+F  G++  GRLG       + +P  +  L  F    V    G    + LT  GK+
Sbjct: 2471 HDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKL 2530

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            ++ G    G+LG+    +     +    K   V+ +S GS H A + S G +YTWG    
Sbjct: 2531 FSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEY 2590

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV---GD-------QS 615
            G+LG GD+     P  V++    +V  + CGS     + L    +V   GD       + 
Sbjct: 2591 GRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRG 2650

Query: 616  SCSQCRMPFGFRRKKHN--C-YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHL 672
                C +P    + +    C   CG  F  A ST  ++    T  KG   R+      H+
Sbjct: 2651 GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV---WTWGKGDYYRLGHGNDTHV 2707

Query: 673  QK 674
            +K
Sbjct: 2708 RK 2709



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P++++      + ++++GA H   VT  G+VF WG+   G+ G+        P+LV  L 
Sbjct: 2710 PQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLE 2769

Query: 313  GINVQSVSCGEFQTCALTKS 332
            G  +  V+CG   + A  +S
Sbjct: 2770 GQKITRVACGSSHSIAWAES 2789


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  164 bits (414), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 174/346 (50%), Gaps = 26/346 (7%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           GD+G    G  S + T      P  L + V  D+ +I+    H A +T EGEV+  G   
Sbjct: 10  GDLGQLGIGDYSDHPT------PTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            G+LG +   +   P  V  L    V  ++CG   T A+T++G + +WG + +G      
Sbjct: 64  AGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDS 123

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                   PR +  + D +  S+VA G +HT  ++ SG ++++GDG+ G LGHGNL   S
Sbjct: 124 GNIVDGVQPRIVKGSRD-LHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCS 182

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P  V+SL GL V  +ACG  H+AA+            + GK+FTWG    G+LGH   +
Sbjct: 183 TPSLVKSLWGLGVTQIACGENHSAAL-----------TVDGKVFTWGRGKYGQLGHGSTQ 231

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----RSI 526
              LP  V  LVD D +Q +CG   T+ +T  G++++ G  + GQ G+   +D    + +
Sbjct: 232 NIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQV 291

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
             +EG++  +    +S+G+ H  VL   G VY WG     QLG  D
Sbjct: 292 HQLEGRVLVQ----VSAGARHTVVLLDRGEVYGWGDCEQRQLGTCD 333



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 16/323 (4%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+  G G  G+LG     D   P  +  L G ++  ++  ++ T  LT  GE+YT G N+
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSND 63

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G R      +P ++   LD   V+ +ACG  HT  V+ +G L ++G   +G LG
Sbjct: 64  AGQ--LGVRGMEEQVVPIRVA-ALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 403 H--GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
              GN+ +  QP+ V+  R L    VA G +HT A+              G ++++GD  
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTG-----------SGDVYSFGDGS 169

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G LGH + +    P+ V  L      Q +CG   +  LT  GKV+T G   +GQLG+  
Sbjct: 170 SGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGS 229

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            ++  + V    L +  V  I+ G  H   +TS G +++WG    GQ G G  ++  +P 
Sbjct: 230 TQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPK 289

Query: 581 FVEALRDRQVESVVCGSSITAAI 603
            V  L  R +  V  G+  T  +
Sbjct: 290 QVHQLEGRVLVQVSAGARHTVVL 312



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 3/170 (1%)

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           G  ++  G  D G+LG  D      PT ++ LV  D V  +     T  LT  G+VYT G
Sbjct: 1   GVAVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           S   GQLG    +++ + +    L    V  I+ G  H   +T  G++ +WG +  GQLG
Sbjct: 61  SNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 570 L--GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI-SVGDQSS 616
              G+  +   P  V+  RD     V  G   T A+     + S GD SS
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSS 170


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 186/374 (49%), Gaps = 30/374 (8%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V +WG  +   D  G V GS    K +V    P L      L   +I+ G+K   +V+ +
Sbjct: 3059 VFVWG--LNDKDQLGGVKGS----KVKVPVFSPAL----SALRPVHIAGGSKTLFIVSHD 3108

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYTW 338
            G++F  GEG +GRLG   + +VS P+    LS + V+ V+   G     ALT  G++Y+W
Sbjct: 3109 GKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSW 3168

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G    G    G R +     PR L ++L G RV  +ACG  H+A V+  G L+T+G G +
Sbjct: 3169 GEGEDGKLGHGNRITLE--APR-LIESLAGERVISIACGSAHSACVTARGHLYTWGLGEY 3225

Query: 399  GVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LGHG  N+Q V  PK VE+L   +V  VACG   +     + +  C      GK+F+W
Sbjct: 3226 GRLGHGDDNIQLV--PKMVEALANYRVIQVACG---SRDAQTLALTAC------GKVFSW 3274

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG    +   +P  V RL      Q  CG   ++ LT  G+V+T G   + +L
Sbjct: 3275 GDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRL 3334

Query: 517  GNP-KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            G+   A  R  T+VE  L+   V  ++ G+ H   +TS   V+ WG N +GQ G G +  
Sbjct: 3335 GHGCDAHVRRPTLVEA-LRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCV 3393

Query: 576  RETPTFVEALRDRQ 589
               P  V  +   Q
Sbjct: 3394 NRRPALVAGVEGVQ 3407



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 136/270 (50%), Gaps = 18/270 (6%)

Query: 253  PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P LL S   + +  ++   G KH   ++ +GEV+ WGEG+DG+LGH   +    PKL+  
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            LSG+ V  ++CG   +  LT  G IYTWG   +G   +G   S    +P KL + L   R
Sbjct: 4087 LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGR--LGHGDSEDQLIP-KLVEALSSFR 4143

Query: 371  VSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            V  VAC  G+  T  ++    ++++GDG +G LG G  +    P  ++ L+GL+V  V C
Sbjct: 4144 VIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVEC 4203

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G   + A+       C+     G ++TWG  D  RLGH   E    P  VT +     V 
Sbjct: 4204 GSQFSVAL-------CQC----GSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVS 4252

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             + G +  V  T  G+VYT G    GQLG+
Sbjct: 4253 IATGSLHCVACTDTGEVYTWGDNDEGQLGD 4282



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 173/364 (47%), Gaps = 35/364 (9%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG V+G+  +  T   AL       A +  VQ +  G +    VT +G+V+  G G 
Sbjct: 3962 GQLGG-VEGAKVRTPTPCHAL-------AALNPVQLVG-GEQTLFAVTPDGKVYATGYGA 4012

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+  +  + +  V+C  G     AL+  GE+Y+WG    G    
Sbjct: 4013 GGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGH 4072

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R S       KL   L G+ V  +ACG  H+A ++  G+++T+G G +G LGHG+ ++
Sbjct: 4073 GNRVSYDR---PKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSED 4129

Query: 409  VSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
               PK VE+L   +V  VACG     T  I D              +++WGD D G+LG 
Sbjct: 4130 QLIPKLVEALSSFRVIDVACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGR 4178

Query: 467  VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----K 522
               E   LP  +  L     ++  CG   +V L   G VYT G   + +LG+       +
Sbjct: 4179 GGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRR 4238

Query: 523  DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
               +T ++GK+    +  I++GS H    T  G VYTWG N  GQLG G +   + P  +
Sbjct: 4239 PMRVTGMQGKM----IVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLL 4294

Query: 583  EALR 586
             AL+
Sbjct: 4295 MALQ 4298



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 151/320 (47%), Gaps = 18/320 (5%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +VF WG     +LG      V  P     LS +    ++ G      ++  G+++  G  
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
             +G   +G   + S   PR     L  V V +VA   G  H   ++  G+++++G+G  G
Sbjct: 3118 TNGRLGLGHSNNVS--TPRA-NPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDG 3174

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHGN   +  P+ +ESL G +V S+ACG  H+A +              G L+TWG  
Sbjct: 3175 KLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVT-----------ARGHLYTWGLG 3223

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLG 517
            + GRLGH D   +L+P  V  L ++  +Q +CG     T+ LT  GKV++ G    G+LG
Sbjct: 3224 EYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLG 3283

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               +   +I +   +L    V  +  G+     LT  G V+TWGK    +LG G      
Sbjct: 3284 RGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVR 3343

Query: 578  TPTFVEALRDRQVESVVCGS 597
             PT VEALR R+V  V  G+
Sbjct: 3344 RPTLVEALRGRRVIHVAVGA 3363



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 151/319 (47%), Gaps = 18/319 (5%)

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            V+ WG    G+LG      V  P     L+ +N   +  GE    A+T  G++Y  G+  
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012

Query: 343  HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
             G   +G   S S      L  ++  V ++KVAC  G  H   +S  G+++++G+G  G 
Sbjct: 4013 GGRLGIGGIDSVSQ---PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LGHGN  +  +PK + +L GL+V  +ACG  H+A +              G+++TWG   
Sbjct: 4070 LGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLT-----------ARGRIYTWGKGR 4118

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGN 518
             GRLGH D E +L+P  V  L  F  +  +CG     T+ +T    V++ G   +G+LG 
Sbjct: 4119 YGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4178

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              ++   + +    LK   V  +  GS     L   GSVYTWGK    +LG G  +    
Sbjct: 4179 GGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRR 4238

Query: 579  PTFVEALRDRQVESVVCGS 597
            P  V  ++ + + S+  GS
Sbjct: 4239 PMRVTGMQGKMIVSIATGS 4257



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 18/274 (6%)

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +Y WGHN+ G     E        P      L+ V   ++  GE     V+  G+++  G
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPV---QLVGGEQTLFAVTPDGKVYATG 4009

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGGK 452
             G  G LG G + +VSQP  + S++ + +  VAC  G  H           C + +  G+
Sbjct: 4010 YGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKH-----------CLALSADGE 4058

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +++WG+ + G+LGH +      P  +T L   + V  +CG   +  LT  G++YT G   
Sbjct: 4059 VYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGR 4118

Query: 513  HGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG+  ++D+ I  +   L    V  ++  SG      +T   +V++WG    G+LG 
Sbjct: 4119 YGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4178

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            G S+  + P  ++ L+  +V  V CGS  + A+C
Sbjct: 4179 GGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALC 4212



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 49/297 (16%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L  I +Q ++C E     LT  G +YT  ++     LV    S++               
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYTLPYDTMTPHLVPGLESKT--------------- 524

Query: 371 VSKVACGEW--HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++V+C     H    S+ G  +++G G  G LGHG+      P+ +  L   +V  VA 
Sbjct: 525 ITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAA 584

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT-------RL 481
           G     A   ++  R       G L+TWG   +GRLGH   E  L P  V+       R+
Sbjct: 585 G----LACSAVITSR-------GALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERI 633

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
           +D   V    G   T+  T  G V   G    G+ G P+A           L    V  +
Sbjct: 634 ID---VALGWGEGSTLCCTWEGAVQVFG---EGEAGTPRALS--------ALAMFRVTRV 679

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
            +G +  A LT GG VYTWGK    +LG G+ +  + P  VEAL+  ++  +  G+S
Sbjct: 680 YTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGAS 736



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 119/278 (42%), Gaps = 33/278 (11%)

Query: 249 DALLPKL---LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           D + P L   LES  +  V   SLG +H    +  G  + WG G+DGRLGH        P
Sbjct: 510 DTMTPHLVPGLESKTITQVSCHSLG-RHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAP 568

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FD 364
           + +  L+   V  V+ G   +  +T  G +YTWG    G   +G     +   P+ + F+
Sbjct: 569 QPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGR--LGHGTIENCLTPQPVSFN 626

Query: 365 TLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
             +  R+  VA G  E  T   +  G +  +G+G  G            P+ + +L   +
Sbjct: 627 AHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGT-----------PRALSALAMFR 675

Query: 423 VKSVACGP-WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
           V  V  G  WH AA+ D           GG+++TWG  D  RLGH + E   +P  V  L
Sbjct: 676 VTRVYTGEHWH-AALTD-----------GGQVYTWGKGDGYRLGHGNMESTKIPKLVEAL 723

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
                V  S G    + L+  G ++  G+    Q+ NP
Sbjct: 724 QGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNP 761



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 36/234 (15%)

Query: 238 DGSVSQNKTQV-DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           DG +    T   DA  P+ L      +V  ++ G   +A++T  G ++ WG G  GRLGH
Sbjct: 554 DGRLGHGDTAARDA--PQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGH 611

Query: 297 KVNMDVSCPKLVECLSGINVQ-----SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
               +   P+ V   +  N++     ++  GE  T   T  G +  +G    G       
Sbjct: 612 GTIENCLTPQPVS-FNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGT------ 664

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGE-WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                  PR L   L   RV++V  GE WH A+ +  GQ++T+G G    LGHGN+++  
Sbjct: 665 -------PRAL-SALAMFRVTRVYTGEHWHAAL-TDGGQVYTWGKGDGYRLGHGNMESTK 715

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
            PK VE+L+G+K+  ++ G  H  A+           +  G LF WG  ++ ++
Sbjct: 716 IPKLVEALQGIKIVDLSLGASHGIAL-----------SSEGVLFVWGTHERTQI 758



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 2/154 (1%)

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            K+F WG  DK +LG V G +  +P     L     V  + G      ++  GK++  G  
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG   + + S       L    V+   + SG  H   LT+ G VY+WG+  +G+LG
Sbjct: 3118 TNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKLG 3177

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G+    E P  +E+L   +V S+ CGS+ +A +
Sbjct: 3178 HGNRITLEAPRLIESLAGERVISIACGSAHSACV 3211



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 95/241 (39%), Gaps = 18/241 (7%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGKVYTM 508
            GKLF  G+   GRLG         P     L  V    V    G    + LT  GKVY+ 
Sbjct: 3109 GKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSW 3168

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+          +   L  E V  I+ GS H A +T+ G +YTWG    G+L
Sbjct: 3169 GEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRL 3228

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH---KSISVGD-------QSSCS 618
            G GD   +  P  VEAL + +V  V CGS     + L    K  S GD       +    
Sbjct: 3229 GHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSD 3288

Query: 619  QCRMPFGFRRKKH---NCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
             C +P    R          CG  F  A +    +    T  KG   R+   C  H+++ 
Sbjct: 3289 GCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV---WTWGKGDYFRLGHGCDAHVRRP 3345

Query: 676  T 676
            T
Sbjct: 3346 T 3346



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 43/313 (13%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + +Q I+   K A L+T +G V+             +  D   P LV  L    +  VSC
Sbjct: 483 IRIQQIACAEKLALLLTHDGAVY------------TLPYDTMTPHLVPGLESKTITQVSC 530

Query: 322 GEFQTCALTKS--GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
                  L +S  G  ++WG    G    G+  +R    P+ L   L    V +VA G  
Sbjct: 531 HSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARD--APQPLHH-LAHHEVVRVAAGLA 587

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            +A++++ G L+T+G G  G LGHG ++N   P+ V S     ++           I+D+
Sbjct: 588 CSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV-SFNAHNIER----------IIDV 636

Query: 440 MVDRCKSNAI----GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
            +   + + +     G +  +G+ + G            P  ++ L  F   +   G   
Sbjct: 637 ALGWGEGSTLCCTWEGAVQVFGEGEAGT-----------PRALSALAMFRVTRVYTGEHW 685

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
              LT  G+VYT G     +LG+   +   I  +   L+   +  +S G+ H   L+S G
Sbjct: 686 HAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEG 745

Query: 556 SVYTWGKNANGQL 568
            ++ WG +   Q+
Sbjct: 746 VLFVWGTHERTQI 758



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 34/223 (15%)

Query: 475  PTCVTRLVDFDFVQASC--GRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRS--ITV 528
            PT +  +      + +C  G    + L+  G+VY+ G    G+LG  N  + DR   IT 
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086

Query: 529  VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            + G      V  I+ G  H A LT+ G +YTWGK   G+LG GDS+++  P  VEAL   
Sbjct: 4087 LSGL----EVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSF 4142

Query: 589  QVESVVCGSSITAAICLHKSISV-----GDQSSCSQ-----CRMPF------GFRRKKHN 632
            +V  V CGS     +C+    +V     GD     +     C++P       G R  K  
Sbjct: 4143 RVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIK-- 4200

Query: 633  CYNCGLHFCSA-CSTKKIINASLTPNKGKPSRVCDTCYNHLQK 674
               CG  F  A C    +     T  KG   R+    Y H+++
Sbjct: 4201 -VECGSQFSVALCQCGSV----YTWGKGDYHRLGHGSYEHVRR 4238



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 2/156 (1%)

Query: 450  GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            G  ++ WG   +G+LG V+G +   PT    L   + VQ   G      +T  GKVY  G
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATG 4009

Query: 510  SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQ 567
                G+LG       S   +   ++  F+  ++  SG  H   L++ G VY+WG+  +G+
Sbjct: 4010 YGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G+    + P  + AL   +V  + CG + +A +
Sbjct: 4070 LGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACL 4105



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 8/129 (6%)

Query: 212 IERKDILKDVMIWGEG-VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLG 270
           IER  I+   + WGEG  L     GAV     Q   + +A  P+ L +  M  V  +  G
Sbjct: 630 IER--IIDVALGWGEGSTLCCTWEGAV-----QVFGEGEAGTPRALSALAMFRVTRVYTG 682

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
               A +T  G+V+ WG+G   RLGH        PKLVE L GI +  +S G     AL+
Sbjct: 683 EHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALS 742

Query: 331 KSGEIYTWG 339
             G ++ WG
Sbjct: 743 SEGVLFVWG 751



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 10/116 (8%)

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           Q +C   L + LT  G VYT+          P  + ++IT V             S   H
Sbjct: 487 QIACAEKLALLLTHDGAVYTLPYDTMTPHLVPGLESKTITQVS----------CHSLGRH 536

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               +S G  ++WG   +G+LG GD+  R+ P  +  L   +V  V  G + +A I
Sbjct: 537 YLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVI 592


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3710 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 3760

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3761 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3820

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3821 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 3877

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 3878 QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 3928

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3988

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 3989 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4044

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4045 LQGKKVNRVACGSAHTLAWSTSKPASAG 4072



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 173/362 (47%), Gaps = 31/362 (8%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG-KDGRLGHKVNM-DVSCPK-LV 308
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  K    G  ++   V  P   +
Sbjct: 2733 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXI 2792

Query: 309  ECLSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
              LS   V+ V+   G  QT      G++++WG  + G      +      +PR L + L
Sbjct: 2793 TALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDG------KLGHFSRMPR-LIEAL 2845

Query: 367  DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
               R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  V
Sbjct: 2846 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2905

Query: 427  ACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRL 481
            ACG     T A+ D            G +F+ GD D  ++G    V G    +P  + RL
Sbjct: 2906 ACGSRDAQTLALTD-----------EGLVFSLGDGDLWKIGPGPEVKGCN--IPQNIERL 2952

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKG 540
                  Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG   ++ V  
Sbjct: 2953 NGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVAC 3012

Query: 541  ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
              SG+ H   +T  G VY WG N +GQ G G +     PT V+ L  +++  V CGSS +
Sbjct: 3013 SCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3072

Query: 601  AA 602
             A
Sbjct: 3073 VA 3074



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 155/340 (45%), Gaps = 22/340 (6%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
            + ++ G + AA  T   +VF WG     +LG   N  +  P   E LS +NV  V+ G  
Sbjct: 2696 KRMAAGLESAA--TIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSK 2753

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTA 382
               A+T  G++Y  G             S +  +P      L    V KVA   G   T 
Sbjct: 2754 SLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTG 2813

Query: 383  IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
                 G++F++G+G  G LGH +      P+ +E+L+  +++ +ACG  H+AA+      
Sbjct: 2814 FXPVDGKVFSWGEGDDGKLGHFS----RMPRLIEALKTKRIRDIACGSSHSAALTS---- 2865

Query: 443  RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLT 500
                    G+L+TWG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT
Sbjct: 2866 -------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2918

Query: 501  GLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
              G V+++G     ++G  P+ K  +I     +L  + V  I  G+     LT  G V+T
Sbjct: 2919 DEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 2978

Query: 560  WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            WGK    +LG G       P  VE LR +++ +  C  ++
Sbjct: 2979 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGAL 3018



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 132/252 (52%), Gaps = 16/252 (6%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            +P+L+E+     +++I+ G+ H+A +T  GE++ WG G+ GRLGH  N     PK+V+ L
Sbjct: 2838 MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 2897

Query: 312  SGINVQSVSCG--EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             G  V  V+CG  + QT ALT  G +++ G  +      G      + +P+ + + L+G 
Sbjct: 2898 LGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCN-IPQNI-ERLNGQ 2955

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC- 428
             V ++ CG   +  ++ SG ++T+G G +  LGHG+  +V +P+ VE LRG K+ + +C 
Sbjct: 2956 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCS 3015

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G  H  A+ D            G+++ WGD D G+ G+        PT V  L      +
Sbjct: 3016 GALHCLAVTD-----------SGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 3064

Query: 489  ASCGRMLTVGLT 500
             +CG   +V  T
Sbjct: 3065 VACGSSHSVAWT 3076



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3698 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 3754

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 3755 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3814

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3874

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 3875 SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 3934

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 3935 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 3994

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 3995 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 4052

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 4053 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 4088



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 3872 HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 3923

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 3924 LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 3977

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 3978 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 4035

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 4036 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 4066



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 626 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 675

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 736 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 4/136 (2%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            +P+ +E      V  I  GA+ +  +TK G V+ WG+G   RLGH  ++ V  P++VE L
Sbjct: 2945 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3004

Query: 312  SGINVQSVSC-GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             G  + + SC G     A+T SG++Y WG N+HG    G   +  +  P  L   L+G +
Sbjct: 3005 RGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQ--GNGTTTVNRKP-TLVQGLEGQK 3061

Query: 371  VSKVACGEWHTAIVST 386
            +++VACG  H+   +T
Sbjct: 3062 ITRVACGSSHSVAWTT 3077



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 116/290 (40%), Gaps = 36/290 (12%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G    ++A G    A + T  ++F
Sbjct: 2656 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLAKRMAAGLESAATIRT--KVF 2713

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            ++G      LG    + +  P   E+L  L V  VA G     A+            + G
Sbjct: 2714 SWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 2762

Query: 452  KLFTWGDADKGR---LGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVY 506
            K++  G+A K     LG   G   +    +T L  +    V    G   T      GKV+
Sbjct: 2763 KVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVF 2822

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            + G    G+LG+     R I      LK + ++ I+ GS H A LTS G +YTWG    G
Sbjct: 2823 SWGEGDDGKLGHFSRMPRLIEA----LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2878

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS---ISVGD 613
            +LG GD+  +  P  V+ L   +V  V CGS     + L       S+GD
Sbjct: 2879 RLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGD 2928


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  163 bits (412), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 23/366 (6%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+  E +V+L    IS GA H+  +   G V  WG G+DG+LGH    D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 309 ECL----SGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
                   G     V CG   T A +    ++Y+WG  + G   +G   S   + P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGR--LGHGNSSDVFNPQPI- 123

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             L GVR++++ACG+ H   V+ +G + ++G    G LG GN ++   P+++++  G++V
Sbjct: 124 QALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
           K +A G  HTAA+ +            G L+ WG    G LG  D + +L+P  V+ +  
Sbjct: 184 KMIAAGAEHTAAVTE-----------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 232

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              V  +CG   T+ ++  G +YT G + +GQLG+   +D  +      LK+  +  IS 
Sbjct: 233 QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISG 292

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  H   L + G +Y WG N  GQ+G+GD+++  +P  V    +++V  V CG   T A+
Sbjct: 293 GWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLAL 352

Query: 604 CLHKSI 609
              K++
Sbjct: 353 TEAKNV 358



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 165/317 (52%), Gaps = 15/317 (4%)

Query: 270 GAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
           GA H  A   +E +++ WG G  GRLGH  + DV  P+ ++ L G+ +  ++CG+    A
Sbjct: 84  GADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +T +G +++WG N +G   +G   +    LP+K+    +GVRV  +A G  HTA V+  G
Sbjct: 144 VTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKI-QAFEGVRVKMIAAGAEHTAAVTEDG 200

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            L+ +G G +G LG G+  +   P++V S+ G K+  VACG  HT  +           +
Sbjct: 201 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV-----------S 249

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G ++T+G +  G+LGH D E  L+P  +  L D    Q S G   T+ L   GK+Y  
Sbjct: 250 SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGW 309

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQ+G    +D    V      E+ V  ++ G  H   LT   +V++WG+  +GQL
Sbjct: 310 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 369

Query: 569 GLGDSQERETPTFVEAL 585
           G G+  +R  P  ++AL
Sbjct: 370 GHGEIVDRNIPKMIDAL 386



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D L+P  LE+     +  IS G +H   +  +G+++ WG  K G++G   N D   P  V
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 331

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
              +   V  V+CG   T ALT++  +++WG    G    GE   R+  +P K+ D L
Sbjct: 332 NFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRN--IP-KMIDAL 386



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  ++ G +H   +T+   VF WG G  G+LGH   +D + PK+++ LS
Sbjct: 339 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 387


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 177/336 (52%), Gaps = 17/336 (5%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           LP ++ +    ++ +I+ GA H    ++    V+ WG G  GRLGH  + D+  P+ ++ 
Sbjct: 56  LPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKG 115

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G+ ++ ++CG+    A+T  GE+++WG N +G   +G   +    +P K+    +G+ 
Sbjct: 116 LKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQ--LGLGHTEDVLVPNKVA-AFEGIA 172

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +A G  HTA V+ SG+L+ +G G +G LG G+  +   P EV ++ G K+  VACG 
Sbjct: 173 VKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGW 232

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT A+ +            G L+T+G +  G+LGH D E  L+P  V  L +      S
Sbjct: 233 RHTIAVAN-----------SGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVS 281

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVA 549
            G   TV L   G++Y  G    GQ+G     D  S  ++ G + E+  + ++ G  H  
Sbjct: 282 GGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTR-VTCGWRHTV 340

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            +T  G+VY+WG+  +GQLG GD+ +R  P  +E L
Sbjct: 341 AITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELL 376



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 15/341 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V ++S GA H   +     V  WG G+DG+LGH    +   P ++  L    + S++CG 
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 324 FQTCALTKSGE-IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
             T A ++S   +Y+WG  + G   +G   S   ++PR +   L G+ + ++ACG+ H  
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGR--LGHGNSSDLFIPRAI-KGLKGLEIKQIACGDSHCL 132

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            ++  G++ ++G    G LG G+ ++V  P +V +  G+ VK +A G  HTAA+ +    
Sbjct: 133 AITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTE---- 188

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   GKL+ WG    G LG  D   +L+P  V  +        +CG   T+ +   
Sbjct: 189 -------SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANS 241

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G +YT G + +GQLG+   +D  +      LK + ++ +S G  H   L   G +Y WG 
Sbjct: 242 GNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGW 301

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N  GQ+G G++ +  +P  +  + + +V  V CG   T AI
Sbjct: 302 NKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAI 342



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  V+ G  HT  + +   + ++G G  G LGHG+ +    P  + +L   ++ S+ CG
Sbjct: 15  RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCG 74

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A       R +S      +++WG  D GRLGH +     +P  +  L   +  Q 
Sbjct: 75  ADHTTA-------RSESTR---TVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQI 124

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +TG G+V++ G   +GQLG    +D  +       +   VK +++G+ H A
Sbjct: 125 ACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTA 184

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V A+   ++  V CG   T A+
Sbjct: 185 AVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAV 238



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+   V   V  ++ G +H   +T  G V+ WG G  G+LGH   +D   PK +E LS
Sbjct: 318 PKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLS 377

Query: 313 --GINVQSVSCGEFQTCA 328
             G+  Q +       CA
Sbjct: 378 ADGLACQGIESSPSGNCA 395


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 175/339 (51%), Gaps = 17/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H   +     V  WG G+DG+LGH    D   P  +  L   ++ S++CG   T
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHT 78

Query: 327 CALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A ++S  E+Y+WG  + G   +G   S    +P+ +   L G+R+ ++ACG+ H   V+
Sbjct: 79  LAYSESRNELYSWGWGDFGR--LGHGNSSDLLIPQPII-ALQGLRIKQIACGDSHCLAVT 135

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G++ ++G    G LG GN ++   P+++++ +G+ +K VA G  H+ AI +       
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITE------- 188

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGK 504
                G+L+ WG    G LG  D   +  P  V+  VD D  V  +CG   T+ ++  G 
Sbjct: 189 ----NGELYGWGWGRYGNLGLGDRNDRWNPEKVSS-VDCDKMVMVACGWRHTISVSSSGG 243

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D  +      L ++ +  +S G  H   LTS G ++ WG N 
Sbjct: 244 IYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNK 303

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+GD+ +  +P  V+  +D++V  + CG   T A+
Sbjct: 304 FGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAV 342



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 176/349 (50%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +    T  D  LP  L +     + +I+ GA H  A      E++ WG G  GRLGH
Sbjct: 43  DGQLGHGDTD-DRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGH 101

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ +  L G+ ++ ++CG+    A+T  GE+ +WG N +G   +G   +   
Sbjct: 102 GNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ--LGLGNTEDS 159

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+     GV +  VA G  H+  ++ +G+L+ +G G +G LG G+  +   P++V 
Sbjct: 160 LVPQKI-QAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVS 218

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+   K+  VACG  HT ++           +  G ++T+G +  G+LGH + E  L+P 
Sbjct: 219 SVDCDKMVMVACGWRHTISV-----------SSSGGIYTYGWSKYGQLGHGNFEDSLVPQ 267

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L D    Q S G   ++ LT  G ++  G    GQ+G     D    V     +++
Sbjct: 268 KLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQ 327

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +V++WG+  NGQLG GD+ +R +P  +EAL
Sbjct: 328 RVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEAL 376



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  ++ G  HT  + +   + ++G G  G LGHG+  +   P ++ +L    + S+ACG
Sbjct: 15  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACG 74

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A  +             +L++WG  D GRLGH +    L+P  +  L      Q 
Sbjct: 75  ADHTLAYSESR----------NELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQI 124

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       K   +K +++G+ H  
Sbjct: 125 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSV 184

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V ++   ++  V CG   T ++
Sbjct: 185 AITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISV 238



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   TV L     V + G    GQLG+    DR +      L  + +  I+ G+ H +
Sbjct: 20  SAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTL 79

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   S   +Y+WG    G+LG G+S +   P  + AL+  +++ + CG S   A+ +   
Sbjct: 80  AYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGE 139

Query: 609 I 609
           +
Sbjct: 140 V 140



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  IS G +H   VT++  VF WG G +G+LGH   +D + PK++E LS
Sbjct: 329 VVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 23/366 (6%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+  E +V+L    IS GA H+  +   G V  WG G+DG+LGH    D   P ++
Sbjct: 16  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 71

Query: 309 ECL----SGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
                   G     V CG   T A +    ++Y+WG  + G   +G   S   + P+ + 
Sbjct: 72  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGR--LGHGNSSDVFNPQPI- 128

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             L GVR++++ACG+ H   V+ +G + ++G    G LG GN ++   P+++++  G++V
Sbjct: 129 QALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 188

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
           K +A G  HTAA+ +            G L+ WG    G LG  D + +L+P  V+ +  
Sbjct: 189 KMIAAGAEHTAAVTE-----------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 237

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              V  +CG   T+ ++  G +YT G + +GQLG+   +D  +      LK+  +  IS 
Sbjct: 238 QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISG 297

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  H   L + G +Y WG N  GQ+G+GD+++  +P  V    +++V  V CG   T A+
Sbjct: 298 GWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLAL 357

Query: 604 CLHKSI 609
              K++
Sbjct: 358 TEAKNV 363



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 165/317 (52%), Gaps = 15/317 (4%)

Query: 270 GAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
           GA H  A   +E +++ WG G  GRLGH  + DV  P+ ++ L G+ +  ++CG+    A
Sbjct: 89  GADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLA 148

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +T +G +++WG N +G   +G   +    LP+K+    +GVRV  +A G  HTA V+  G
Sbjct: 149 VTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKI-QAFEGVRVKMIAAGAEHTAAVTEDG 205

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            L+ +G G +G LG G+  +   P++V S+ G K+  VACG  HT  +           +
Sbjct: 206 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV-----------S 254

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G ++T+G +  G+LGH D E  L+P  +  L D    Q S G   T+ L   GK+Y  
Sbjct: 255 SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGW 314

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQ+G    +D    V      E+ V  ++ G  H   LT   +V++WG+  +GQL
Sbjct: 315 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQL 374

Query: 569 GLGDSQERETPTFVEAL 585
           G G+  +R  P  ++AL
Sbjct: 375 GHGEIVDRNIPKMIDAL 391



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D L+P  LE+     +  IS G +H   +  +G+++ WG  K G++G   N D   P  V
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 336

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
              +   V  V+CG   T ALT++  +++WG    G    GE   R+  +P K+ D L
Sbjct: 337 NFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRN--IP-KMIDAL 391



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  ++ G +H   +T+   VF WG G  G+LGH   +D + PK+++ LS
Sbjct: 344 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 392


>gi|255080574|ref|XP_002503867.1| predicted protein [Micromonas sp. RCC299]
 gi|226519134|gb|ACO65125.1| predicted protein [Micromonas sp. RCC299]
          Length = 1066

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 190/415 (45%), Gaps = 46/415 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
           +P     A  LDV  ++LGA+HA  V +   V+ WG+G  GRLG  V+      P  +  
Sbjct: 253 VPARAPGADGLDVVAVALGARHAVAVVRHQGVYTWGDGAGGRLGRGVDQRGRGRPSKLSV 312

Query: 311 LSGINV----------QSVSCGEFQTCALT-KSGEIYTWGHNNHGADLVGERRSRSHW-- 357
           +SG  V          + VSCG   T A+    G  Y WG  + G        S S    
Sbjct: 313 VSGGEVSDRGAGFERIREVSCGGQYTVAVNYGDGAAYAWGDASGGCHGALGMASPSKGIV 372

Query: 358 ----LPRKLFDTLD-GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQ 411
               LP K+      G RVS+V+CG +H A V+ +G LF +G+G F  LGH G+      
Sbjct: 373 AGVSLPTKVSVGFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGAFHALGHDGDKSTCQH 432

Query: 412 PKEVESL--RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG-GKLFTWGDADKGRLGHVD 468
           P+ V  L   G +V +V+CG +HTAA+    +DR  +   G G+L+TWGDAD G+LGH  
Sbjct: 433 PRRVRGLWDAGRRVSNVSCGVYHTAAVA---IDRTTTGCAGRGELWTWGDADGGKLGHGA 489

Query: 469 GERKLLPTCVTRLV-----DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
              K       R V     + D    SCG+  T+     G V+  GS        P    
Sbjct: 490 EAAKEKAVVAPRRVSGLDENADVTTVSCGQWHTLAACADGVVWVCGSVGKVAPAEPALTP 549

Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS-VYTWGKNANGQLGLGDSQERETPTFV 582
             +  + G       + I+SG +H   +  GG  +++WG+   G LG    ++   P  V
Sbjct: 550 ERVPGIPGG-----AEAIASGEWHAVAIGRGGEKMFSWGRGRRGALGHAGGRDEHAPRAV 604

Query: 583 EALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
           EAL  R+V  V CG   TAA+   +S++V +++         G  +KK    N G
Sbjct: 605 EALAGRRVHHVACGPESTAAVVSSRSMTVQERA---------GLTKKKDLALNFG 650



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 221/585 (37%), Gaps = 109/585 (18%)

Query: 2   DEKFLIWYS-GQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANG----ER 56
           DE  L W   G + K +R+  V ++I G+ T  F+   QP    Q  S++Y  G     R
Sbjct: 49  DETKLEWVGKGARVKAVRMGLVLQVIAGRETPAFKSSKQPSPPDQCLSLMYREGVGKKPR 108

Query: 57  SLDLICKDKVQAESWFLGLRAA----------------------ISSCRRSRTFSCLREK 94
           SLDL+C+D  QA  W LGL A                        SS  R      +   
Sbjct: 109 SLDLVCEDAGQARMWRLGLDAVRERGGAGVTAEAFSSDDEDVVPASSPVRDAKLDEMAAD 168

Query: 95  RGVQSCVSSPAS-YIRRKHNLGLLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSF 153
            GV   V+S AS +++ K   G  E        RSL             S  +S   + F
Sbjct: 169 FGVAMKVNSAASKFMKLKSPRGGAEQGDVGRGRRSL------------RSSAISDPRELF 216

Query: 154 YSSESSSSQIQNLSNIITPSSPHMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIE 213
                 S       ++  P +          W       R P  +   +V    G+    
Sbjct: 217 LWGRMPSEFEPPPIDVGDPDAAAGVGPAVGGWREWSVPARAPGADGLDVVAVALGARHAV 276

Query: 214 RKDILKDVMIWGEGVLGGDIGGAVD--GSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
                + V  WG+G  GG +G  VD  G    +K  V +        A    ++ +S G 
Sbjct: 277 AVVRHQGVYTWGDGA-GGRLGRGVDQRGRGRPSKLSVVSGGEVSDRGAGFERIREVSCGG 335

Query: 272 KHAALVT-KEGEVFCWGE---GKDGRLGHK-----VNMDVSCPKLVEC--LSGINVQSVS 320
           ++   V   +G  + WG+   G  G LG       +   VS P  V      G  V  VS
Sbjct: 336 QYTVAVNYGDGAAYAWGDASGGCHGALGMASPSKGIVAGVSLPTKVSVGFPVGTRVSRVS 395

Query: 321 CGEFQTCALTKSGEIYTWGHNN-HGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGE 378
           CG F   A+T +G+++ WG    H     G++ +  H  PR++    D G RVS V+CG 
Sbjct: 396 CGAFHAAAVTAAGDLFCWGEGAFHALGHDGDKSTCQH--PRRVRGLWDAGRRVSNVSCGV 453

Query: 379 WHTAIVSTS---------GQLFTYGDGTFGVLGHG----NLQNVSQPKEVESL-RGLKVK 424
           +HTA V+           G+L+T+GD   G LGHG      + V  P+ V  L     V 
Sbjct: 454 YHTAAVAIDRTTTGCAGRGELWTWGDADGGKLGHGAEAAKEKAVVAPRRVSGLDENADVT 513

Query: 425 SVACGPWHT-AAIVDIMVDRCKS-----------------------NAI----------- 449
           +V+CG WHT AA  D +V  C S                        AI           
Sbjct: 514 TVSCGQWHTLAACADGVVWVCGSVGKVAPAEPALTPERVPGIPGGAEAIASGEWHAVAIG 573

Query: 450 --GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
             G K+F+WG   +G LGH  G  +  P  V  L        +CG
Sbjct: 574 RGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHVACG 618



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 958  ASKLEYAEQYEPGIYITFTTL-PSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYG 1016
            A+  E+ E+ EPG+++T  T   S    L+RVRFS+ +F++  A+ WWE+++  + +  G
Sbjct: 996  AATREWVEEVEPGVFLTIATHGSSAAHVLRRVRFSKSKFSDGNAQAWWEQHRARIIRARG 1055

Query: 1017 IE 1018
            ++
Sbjct: 1056 LK 1057


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 50/381 (13%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH--KVNMDVSCPKLVEC 310
           P  +E      ++ +  G   +  +T  GEV+ WG+ K G LGH  +++ +++ P+ +E 
Sbjct: 73  PTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEK 132

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHN-----NHGADLVGERRSR------SH--- 356
           L G  ++ +SCG+F   A+T+ GE+YTWG+       H  +L  E++ +      SH   
Sbjct: 133 LLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYL 192

Query: 357 ---WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQP 412
               LP+K+ ++L  ++  +VACG   T ++S  G+++T+G   +G LG+ + QN V+ P
Sbjct: 193 QDSMLPQKI-ESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTP 251

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           + ++ L    +  ++ G    AAI              GKL+TWG+   G+LG+     +
Sbjct: 252 QLIKDLN--DIVKISAGYSFCAAITKQ-----------GKLYTWGNNRNGQLGNSQSLYQ 298

Query: 473 LLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----RSIT 527
             P+ VT     +  V  SCG      LT  G++YT G    GQLG+    D    R + 
Sbjct: 299 TKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHV- 357

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-----DSQERETPTFV 582
               + K++ +K I+ G  H A +T    +Y +G+ + GQLG+G     ++  R TP  V
Sbjct: 358 ----EFKQKIIK-IACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLV 412

Query: 583 EALRDRQVESVVCGSSITAAI 603
           +  + +QV  V CG   T AI
Sbjct: 413 QYFKGKQVVDVTCGGEHTIAI 433



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 174/341 (51%), Gaps = 35/341 (10%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G  G+LG +   +   P  +E L+   ++ V  G+  + ALT +GE+Y+WG N 
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G     +R S +   P ++ + L G ++ +++CG++H A V+  G+++T+G+  FG LG
Sbjct: 111 GGILGHEDRLSFNMTQPERI-EKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 403 H--------------GN-----LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           H              GN     LQ+   P+++ESL  +K K VACG   T  + +     
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE----- 224

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  GK++T+G    G LG+V  +  +    + + ++ D V+ S G      +T  G
Sbjct: 225 ------DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLN-DIVKISAGYSFCAAITKQG 277

Query: 504 KVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           K+YT G+  +GQLGN ++  ++  ++V G   +  +  +S G   +A LT  G +YTWG 
Sbjct: 278 KLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGF 337

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             +GQLG G+  +   P  VE    +++  + CG S  A I
Sbjct: 338 GGDGQLGHGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFI 376



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 138/268 (51%), Gaps = 24/268 (8%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G++S +  Q D++LP+ +ES   +  + ++ G +   +++++G+V+ +G  + G LG+  
Sbjct: 185 GNLSHDYLQ-DSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVS 243

Query: 299 NMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
           + + V+ P+L++ L+  ++  +S G     A+TK G++YTWG+N +G   +G  +S    
Sbjct: 244 DQNSVTTPQLIKDLN--DIVKISAGYSFCAAITKQGKLYTWGNNRNGQ--LGNSQSLYQT 299

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  +        +  V+CG+   A ++  GQL+T+G G  G LGHGN  ++  P+ VE 
Sbjct: 300 KPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF 359

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG---HVDGERKL- 473
            +  K+  +ACG  H A I +             +L+ +G   +G+LG   +V  E  + 
Sbjct: 360 KQ--KIIKIACGGSHAAFITE-----------DNQLYQFGRGSEGQLGIGQNVASEASIR 406

Query: 474 -LPTCVTRLVDFDFVQASCGRMLTVGLT 500
             P  V        V  +CG   T+ +T
Sbjct: 407 STPNLVQYFKGKQVVDVTCGGEHTIAIT 434



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-----SCPKLVECLSGINVQSVSC 321
           I+ G  HAA +T++ +++ +G G +G+LG   N+       S P LV+   G  V  V+C
Sbjct: 366 IACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTC 425

Query: 322 GEFQTCALTK 331
           G   T A+T+
Sbjct: 426 GGEHTIAITQ 435


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 171/350 (48%), Gaps = 25/350 (7%)

Query: 238 DGSVSQNKTQVDALLPKLL-ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           D S S N    D    KL  E  ++L    ++ GA H A++++ G++F WGEG+ GRLGH
Sbjct: 108 DDSGSNNNNDDDKYFTKLYPEERIIL----VNAGAAHIAMISQSGKLFTWGEGQYGRLGH 163

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL--TKSGEIYTWGHNNHGADLVGERRSR 354
                +S PK V  L+ I ++ V CG   T AL  T    +YTWG+N  G    G+    
Sbjct: 164 GDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDD 223

Query: 355 SHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
              LP  +   + G  R+  +  G    A++ +SG LFT+G G  G LGHG+ +N  QP 
Sbjct: 224 FTCLPESV--AVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPT 281

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-RK 472
            V SL G  V +VA G  H+ A+              G+LF+WG  + G+LGH   + ++
Sbjct: 282 LVSSLYGHVVVAVALGGGHSLALTK-----------AGELFSWGRGENGQLGHGSYQSQQ 330

Query: 473 LLPTCVTRLVDF-DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
           L P  +   VD    +  S G   +V     G VY  G + +G LG   + D +I + + 
Sbjct: 331 LAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQR 390

Query: 532 KLKEEFV--KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            L    +  K IS G  H   LTS  ++Y+WG    G+LG  + + +  P
Sbjct: 391 ILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAP 440



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 20/255 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           GA  AA++   G +F WG G  GRLGH    +   P LV  L G  V +V+ G   + AL
Sbjct: 245 GASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLAL 304

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           TK+GE+++WG   +G   +G    +S  L P++L   +D  ++  ++ G +H+      G
Sbjct: 305 TKAGELFSWGRGENGQ--LGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDG 362

Query: 389 QLFTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            ++ +G   +G+LG G+  +  ++ P+ +   RG++ K+++CG  HT A+          
Sbjct: 363 SVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTS-------- 414

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
                 +++WG    GRLG  + + +  P     + ++  V  S G + T+    +GK  
Sbjct: 415 ---DNTIYSWGCGLGGRLGTFNEKNQCAPIAC-NIPNYQPVVFSAGEISTI---VIGKKN 467

Query: 507 TMGSAVHGQLGNPKA 521
           T+ +   G    P +
Sbjct: 468 TVVATSSGLTSTPTS 482



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 12/162 (7%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL--TGLGKVYTM 508
           GKLFTWG+   GRLGH D E    P  V  L +       CG   T+ L  T    +YT 
Sbjct: 148 GKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTW 207

Query: 509 GSAVHGQLGNPKAKD------RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G+   GQLG     D       S+ V   K     +  + +G+   AV+ S G+++TWG+
Sbjct: 208 GNNEFGQLGRGDCGDDFTCLPESVAVPGAKR----LVALDAGASRAAVIDSSGALFTWGR 263

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             +G+LG GD++ R  PT V +L    V +V  G   + A+ 
Sbjct: 264 GDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALT 305



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%)

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
           EE +  +++G+ H+A+++  G ++TWG+   G+LG GD +   TP  V AL +  ++ V 
Sbjct: 128 EERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVF 187

Query: 595 CGSSITAAI 603
           CG   T A+
Sbjct: 188 CGGRSTIAL 196


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 186/392 (47%), Gaps = 52/392 (13%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G  G         + +     V A  P   ++  ++  QN +       ++  
Sbjct: 3536 DVYLWGAGRHG-------QLAEAGRNVMVPAAAPSFSQAQQVICGQNCTF------VIQA 3582

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 3583 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3642

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  ++G   +G   S     PR++ + L G  V +++CG  H+A+V++ G+LFT+G+G
Sbjct: 3643 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3699

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +G LG GN  N   P+ V           ACG  HT A+          +A G  ++ +
Sbjct: 3700 DYGRLGLGNTSNKKLPERV-----------ACGLNHTLAV----------SADGSMVWAF 3738

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            GD D G+LG  +   K  P  V  L      + +CG   +V LT  G VYT G      +
Sbjct: 3739 GDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ--DRLI 3796

Query: 517  GNPKAKDRS------ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            G P+ + R+      + V+ G + E+    ++ G+ H   L S G VY WG N+ GQLGL
Sbjct: 3797 GLPEGRARNHNRPQQVPVLAGVVIED----VAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G +     PT V  L+ + V  +  G   +AA
Sbjct: 3853 GHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 3884



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 357 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 414

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 415 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 473

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 474 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 526

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 527 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 580

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 636

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   A+     +     +S  Q
Sbjct: 637 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 694

Query: 620 C 620
           C
Sbjct: 695 C 695



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 387 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 444

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 445 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 502

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 503 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 560

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 561 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 610

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 611 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 665

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 666 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 725

Query: 598 SITAA 602
           S + A
Sbjct: 726 SHSLA 730



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 149/327 (45%), Gaps = 39/327 (11%)

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
            H+  +T+ GEVF WG+G  G+LGH  +     P+ +E L G  V  +SCG   +  +T  
Sbjct: 3631 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 3690

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL-F 391
            G+++T+G+ ++G   +G   ++   LP             +VACG  HT  VS  G + +
Sbjct: 3691 GKLFTFGNGDYGRLGLGNTSNKK--LPE------------RVACGLNHTLAVSADGSMVW 3736

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +GDG +G LG GN    S P++V+ L G+ +K VACG   + A+              G
Sbjct: 3737 AFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTK-----------DG 3785

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
             ++T+G      L          P  V  L        + G   T+ L   G VY  GS 
Sbjct: 3786 HVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSN 3845

Query: 512  VHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNANG 566
              GQLG    N   +   +TV++GK     V+ IS+G  H A  T+        G +   
Sbjct: 3846 SEGQLGLGHTNHVREPTLVTVLQGK----NVRQISAGRCHSAAWTAPPVPPRAPGVSVPL 3901

Query: 567  QLGLGDSQERETPTFVEALRDRQVESV 593
            QLGL D+     P    ALR+  + +V
Sbjct: 3902 QLGLPDA----VPPQYGALREVSIHTV 3924



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 30/273 (10%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++Y WG   HG         R+  +P          +  +V CG+  T ++  +G +   
Sbjct: 3536 DVYLWGAGRHGQL---AEAGRNVMVPAA---APSFSQAQQVICGQNCTFVIQANGTVLAC 3589

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--ACGP-WHTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++     + +L+G  V  +  +CG   H+ A+ +            
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----------S 3638

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + +R+  P  +  L   + VQ SCG   +  +T  GK++T G+
Sbjct: 3639 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 3698

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
              +G+LG     ++       KL E    G++   + +AV   G  V+ +G    G+LGL
Sbjct: 3699 GDYGRLGLGNTSNK-------KLPERVACGLN---HTLAVSADGSMVWAFGDGDYGKLGL 3748

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+S  + +P  V+ L    ++ V CG+  + A+
Sbjct: 3749 GNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 3781



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 476 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 583

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 584 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 639

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C + +   +++ W
Sbjct: 640 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLALSHDNEVYAW 687

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 688 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 736



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 529 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 575

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 576 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 635

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 636 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNS 691

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 692 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 738



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 449  IGGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +GGK  ++ WG    G+L    G   ++P            Q  CG+  T  +   G V 
Sbjct: 3531 LGGKCDVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQAQ--QVICGQNCTFVIQANGTVL 3587

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI--SSGSY-HVAVLTSGGSVYTWGKN 563
              G   +G+LG   + D  +  V   L+   V  +  S GS  H   LT  G V++WG  
Sbjct: 3588 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3647

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G+S  +  P  +EAL+  +V  + CG   +A +
Sbjct: 3648 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVV 3687



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++++GA+H   +   G+V+ WG   +G+LG      V  P LV  L G NV+ +S G 
Sbjct: 3820 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGR 3879

Query: 324  FQTCALT 330
              + A T
Sbjct: 3880 CHSAAWT 3886


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 193/397 (48%), Gaps = 40/397 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ + S   L ++ I+ G+ H   +   G++  WG G+ G+LGH      S P +++ L+
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELA 159

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V+ V+CG   + AL + G++YTWG N +G    G+R S +  +PR +  +++   V 
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA--IPR-MLPSMNHRHVH 216

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
            +ACG  H  +++TS  ++T+G+ ++G LGHG   ++  QPK V  + GL +K +  G  
Sbjct: 217 LMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGEN 276

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           H+  +              G ++TWG  D G+LGH D E K +PT ++ L      QAS 
Sbjct: 277 HSCVMTSF-----------GDIYTWGRGDFGQLGHGDMESKDIPTLLSPLD--PKTQASL 323

Query: 492 ---GRMLTVGLTGLGKVYTMGSAVHGQLGN------PKAKDRSITVVEGKLKEEF----- 537
              G    + +T  G VY+ G    GQLG+       K+      V+  K+   F     
Sbjct: 324 IVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEE 383

Query: 538 -----VKGISSGSYHVAVLTS-GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQ 589
                +  IS GS+HV  +T    +++ WG+  +GQLGL   D+  R  P  V+ ++   
Sbjct: 384 HDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMI 443

Query: 590 VESVVCGSSITAAIC-LHKSISVGDQSSCSQCRMPFG 625
           V +  C  + +  +  +  S   GD    S  R  FG
Sbjct: 444 VLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFG 480



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 37/281 (13%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           +DV  WG    G          +     +   L PK +     LD++ I  G  H+ ++T
Sbjct: 232 RDVYTWGNNSYG---------QLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT 282

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS--VSCGEFQTCALTKSGEIY 336
             G+++ WG G  G+LGH        P L+  L      S  VS  +F   A+T SG +Y
Sbjct: 283 SFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADF-IMAMTYSGAVY 341

Query: 337 TWGHN-----NHGADLVGERRSRSHWLPRKLF-----------DTLDGVRVSKVACGEWH 380
           +WG N      HG D+     S+S+  P  +            +  D + +S ++CG  H
Sbjct: 342 SWGRNCFGQLGHGVDM---HYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHH 398

Query: 381 T-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIV 437
             AI      LF +G G  G LG        +  P+EV+ ++G+ V + AC   H+  + 
Sbjct: 399 VLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVA 458

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +     K +    K+F+WG    G+LG+  G+  ++   V
Sbjct: 459 TMPGSGPKGDM---KVFSWGRGSFGQLGYGSGKVPVMKETV 496



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G   + G  +  N  +P+EV SL GL +K + CG  H  A+              GK+ +
Sbjct: 84  GATRIHGRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLAL-----------DASGKIRS 132

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG  + G+LGH        P+ +  L      + +CG   +  L   G++YT G   +GQ
Sbjct: 133 WGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQ 192

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG       +I  +   +    V  ++ G+ H+ VLT+   VYTWG N+ GQLG G  ++
Sbjct: 193 LGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKK 252

Query: 576 R-ETPTFVEALRDRQVESVVCG 596
               P  V  +    ++ +V G
Sbjct: 253 HCLQPKSVRVMSGLDIKQIVAG 274



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 50/235 (21%)

Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIG--GAVDGSVSQNKTQVDALLPKL 255
           E+H  V  ++G           D+  WG G    D G  G  D       T +  L PK 
Sbjct: 275 ENHSCVMTSFG-----------DIYTWGRG----DFGQLGHGDMESKDIPTLLSPLDPKT 319

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM----------DVSCP 305
             S ++        GA     +T  G V+ WG    G+LGH V+M          DV  P
Sbjct: 320 QASLIVS-------GADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISP 372

Query: 306 KLVECLSG------INVQSVSCGEFQTCALT-KSGEIYTWGHNNHGADLVGERRSRSHWL 358
           K++   +       I++ S+SCG     A+T K   ++ WG   HG   +  R +    +
Sbjct: 373 KIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPI 432

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVST---SG-----QLFTYGDGTFGVLGHGN 405
           P+++   + G+ V   AC E H+ +V+T   SG     ++F++G G+FG LG+G+
Sbjct: 433 PQEV-KKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGS 486



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 6/189 (3%)

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           GR    + +R   P  V  L        +CG    + L   GK+ + G    GQLG+   
Sbjct: 90  GRFSTYNSQR---PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASF 146

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
              S   +  +L  + VK ++ G    A L  GG +YTWG N  GQLG GD      P  
Sbjct: 147 SHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRM 206

Query: 582 VEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFC 641
           + ++  R V  + CG++    +   + +     +S  Q  +  GF RKKH      +   
Sbjct: 207 LPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQ--LGHGF-RKKHCLQPKSVRVM 263

Query: 642 SACSTKKII 650
           S    K+I+
Sbjct: 264 SGLDIKQIV 272


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 212 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 262

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
            GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 263 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 322

Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
           G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 323 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 379

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
             +PK VE+L+G +V  VACG      +       C ++     +++WGD D G+LG   
Sbjct: 380 QLKPKLVEALQGHRVVDVACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 430

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
            +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 490

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
            +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 491 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 546

Query: 585 LRDRQVESVVCGSSITAAICLHKSISVG 612
           L+ ++V  V CGS+ T A    K  S G
Sbjct: 547 LQGKKVNRVACGSAHTLAWSTSKPASAG 574



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 69/402 (17%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 200 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 256

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
             G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 257 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 316

Query: 436 -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                    +VD+      S  +   G L+TWG    GRLGH D
Sbjct: 317 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 376

Query: 469 GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
            E +L P  V  L     V  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 377 SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 436

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
            +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 437 PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 496

Query: 587 DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
            ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 497 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNR 554

Query: 634 YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
             CG     A ST K  +A   P +          YNHLQ+I
Sbjct: 555 VACGSAHTLAWSTSKPASAGKLPAQ------VPMEYNHLQEI 590



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
           + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 390 QGHRVVDVACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 441

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
           S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 442 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 501

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 502 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 558

Query: 378 EWHTAIVSTS 387
             HT   STS
Sbjct: 559 SAHTLAWSTS 568


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 312 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 362

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
            GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 363 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 422

Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
           G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 423 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 479

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
             +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 480 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 530

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
            +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 531 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 590

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
            +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 591 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 646

Query: 585 LRDRQVESVVCGSSITAAICLHKSISVG 612
           L+ ++V  V CGS+ T A    K  S G
Sbjct: 647 LQGKKVNRVACGSAHTLAWSTSKPASAG 674



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 300 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 356

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 357 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 407

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 467

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 527

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G S   + P  +++L    V  V CGS  + A+
Sbjct: 528 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 561



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
           + HR++    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 490 QGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 541

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
           S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 542 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 601

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 602 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 658

Query: 378 EWHTAIVSTS 387
             HT   STS
Sbjct: 659 SAHTLAWSTS 668



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 300 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 350

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
               GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 351 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 408

Query: 505 VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 409 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 466

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
              G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 467 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 515


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 202/422 (47%), Gaps = 39/422 (9%)

Query: 215  KDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
            KDI   V +WG   +  LGG  G       S+ KT      P + E+   L    I  G+
Sbjct: 2910 KDIQTQVFVWGLNDKDQLGGPKG-------SKIKT------PGINETLSTLKCVQIVGGS 2956

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSC--GEFQTCA 328
            K    VT++G++F  GE  +GRLG  ++  +V  P+ +  LS   ++ V+   G     A
Sbjct: 2957 KSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMA 3016

Query: 329  LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
            LT  G++++WG  + G   +G   SR +    +L + L   RV  +ACG  H+A + ++G
Sbjct: 3017 LTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNG 3073

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKS 446
             L+T+G G +G LGHG+     +PK V++L G +V  VA G     T A+ D        
Sbjct: 3074 DLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTD-------- 3125

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
                G +++WGD D G+LG    E   +P  + RL      Q  CG   ++ LT  G+V+
Sbjct: 3126 ---SGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVW 3182

Query: 507  TMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            T G   + +LG+   A  R   +VE  LK + V  ++ G+ H   +   G VY WG N +
Sbjct: 3183 TWGKGDYFRLGHGTDAHVRKPQLVE-TLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDH 3241

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-LHKSISVGDQSSC-SQCRMP 623
            GQ G   +     P  V+ L   ++  V CGSS + A C L  S+    +    S  R P
Sbjct: 3242 GQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAWCTLDSSVPASHEPVLFSSARDP 3301

Query: 624  FG 625
             G
Sbjct: 3302 LG 3303



 Score =  159 bits (402), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 196/399 (49%), Gaps = 36/399 (9%)

Query: 223  IWGEG-VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG 281
            IWG G    G +GG V+G+  +     + L       A M  VQ I  G +    +T +G
Sbjct: 3938 IWGWGHNHRGQLGG-VEGAKVKLPVSCETL-------ATMRPVQLIG-GEQTLFSITGDG 3988

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYTWG 339
            +V   G G  GRLG      V+ P L+E +  + ++ V+   G     AL+  GE+Y+WG
Sbjct: 3989 KVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWG 4048

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
                G    G R       PR + ++L G  V  +A G  H+A ++++G+L+++G G +G
Sbjct: 4049 EGEDGKLGHGNRSPCDR--PRAI-ESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYG 4105

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWG 457
             LGHG+ ++ ++PK V++L+G +V  VACG     T  I D              +++WG
Sbjct: 4106 RLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITD-----------DDSVWSWG 4154

Query: 458  DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D D G+LG    +   +P  +  L     ++  CG   +V LT  G VYT G   + +LG
Sbjct: 4155 DGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4214

Query: 518  NPKA----KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            +       + R  T ++GK     +  I+ GS H    T  G VYTWG N  GQLG G +
Sbjct: 4215 HGTEDHIRRPRRCTTLQGKK----IVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTT 4270

Query: 574  QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
               + P  V AL+ +++  V CGS+ + A   +K ++ G
Sbjct: 4271 NAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPVNAG 4309



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 149/318 (46%), Gaps = 29/318 (9%)

Query: 257 ESAVMLDVQNISLGA----KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           E + + D++ I L A     H   +T EG+V+ WG G  G+LGH   +    P L+  L 
Sbjct: 469 EISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELH 528

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           G +V +V+CG   + A+T SGE++TWG  + G   +G   S    L   L   L GV V 
Sbjct: 529 GKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLG---STEDILTPALVSGLLGVTVV 585

Query: 373 KVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
            VAC  G+  T  ++ +G ++++GDG +G LG G  +    PK V+ L+GL V  V CGP
Sbjct: 586 DVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGP 645

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            ++AA+       CK+ A+    FTWG+ +  +LGH   E    P  V  L        S
Sbjct: 646 QYSAAV-------CKNGAV----FTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLS 694

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            G    +  T  G++ + G    GQLG      ++       L  + + GI+        
Sbjct: 695 LGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGIT-------- 746

Query: 551 LTSGGSVYTWGKNANGQL 568
             S    + W + + G +
Sbjct: 747 -CSSAQTFAWSRPSRGTM 763



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 134/274 (48%), Gaps = 26/274 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV  WG G    D G    G    +    D+  P L+       V N++ G+ H+A +T 
Sbjct: 498 DVYSWGNG----DFGKLGHG----DTVTCDS--PMLINELHGKSVVNVACGSHHSAAITA 547

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQTCALTKSGEIYT 337
            GE+F WG G  GRLG     D+  P LV  L G+ V  V+C  G+ QT AL  +G +Y+
Sbjct: 548 SGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYS 607

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG   +G   +G   S     P KL D L G+ V++V CG  ++A V  +G +FT+G+G 
Sbjct: 608 WGDGEYGK--LGRGGSEGCKAP-KLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGE 664

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
              LGHG  ++V  P++VE+L G  V S++ G  H           C +    G+L +WG
Sbjct: 665 GYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHH-----------CLATTEEGELLSWG 713

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
             DKG+LG      K  P     L+    +  +C
Sbjct: 714 RNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITC 747



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 138/281 (49%), Gaps = 24/281 (8%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ALT  G++Y+WG+ + G   +G   + +   P  L + L G  V  VACG  H+A ++ S
Sbjct: 492 ALTSEGDVYSWGNGDFGK--LGHGDTVTCDSP-MLINELHGKSVVNVACGSHHSAAITAS 548

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCK 445
           G+LFT+G G+FG LG G+ +++  P  V  L G+ V  VACG     T A+ D       
Sbjct: 549 GELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADT------ 602

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G +++WGD + G+LG    E    P  V +L   D  +  CG   +  +   G V
Sbjct: 603 -----GSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAV 657

Query: 506 YTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           +T G+    +LG+   +     R +  + GK     V  +S GS+H    T  G + +WG
Sbjct: 658 FTWGNGEGYKLGHGTEEHVRFPRQVETLAGK----HVTSLSLGSHHCLATTEEGELLSWG 713

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +N  GQLG G +  +  P F  +L  + +  + C S+ T A
Sbjct: 714 RNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFA 754



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 142/336 (42%), Gaps = 38/336 (11%)

Query: 269 LGAKHAALVTKEGEVFCWG-EGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           + A+ A  V    E+F WG         H     +  P  ++     ++  V+C      
Sbjct: 393 MPAQEAHKVCGAQELFAWGWLSTSDATCHNTPTTIPLPNDLD-----DIIQVACSSNSLL 447

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD--TLDGVRVSKVACGEW--HTAI 383
            L ++G +Y   ++                 P+ + +  TL  + + K+A      H   
Sbjct: 448 ILLRTGRVYKMTNSAE---------------PQSMHEISTLADIEIIKLAAHSEGSHCLA 492

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +++ G ++++G+G FG LGHG+      P  +  L G  V +VACG  H+AAI       
Sbjct: 493 LTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAIT------ 546

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTG 501
                  G+LFTWG    GRLG    E  L P  V+ L+    V  +CG     T+ L  
Sbjct: 547 -----ASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD 601

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G VY+ G   +G+LG   ++      +  KL+   V  +  G  + A +   G+V+TWG
Sbjct: 602 TGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWG 661

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
                +LG G  +    P  VE L  + V S+  GS
Sbjct: 662 NGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGS 697



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 25/327 (7%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG+I+ WGHN+ G   +G        LP    +TL  +R  ++  GE     ++  G++ 
Sbjct: 3935 SGQIWGWGHNHRGQ--LGGVEGAKVKLPVSC-ETLATMRPVQLIGGEQTLFSITGDGKVC 3991

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G   +V+ P  +ES++ + ++ VA         ++     C + +  G
Sbjct: 3992 ATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVA---------INSGGKHCLALSAEG 4042

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+ + G+LGH +      P  +  L   + V  + G   +  +T  G++Y+ G  
Sbjct: 4043 EVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKG 4102

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D++   +   LK   V  ++  SG      +T   SV++WG    G+LG
Sbjct: 4103 RYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG 4162

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----------GDQSSCS 618
             G S   + P  ++AL+   V  V CGS  + A+    ++             G +    
Sbjct: 4163 RGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIR 4222

Query: 619  QCRMPFGFRRKKHNCYNCGLHFCSACS 645
            + R     + KK     CG   C AC+
Sbjct: 4223 RPRRCTTLQGKKIVSIACGSLHCVACT 4249



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 34/276 (12%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E++ WG  +  +D        +  LP  L D +      +VAC      I+  +G+++  
Sbjct: 406 ELFAWGWLS-TSDATCHNTPTTIPLPNDLDDII------QVACSSNSLLILLRTGRVY-- 456

Query: 394 GDGTFGVLGHGNLQNVSQPK---EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
                       + N ++P+   E+ +L  +++  +A    H+          C +    
Sbjct: 457 -----------KMTNSAEPQSMHEISTLADIEIIKLAA---HSEG------SHCLALTSE 496

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WG+ D G+LGH D      P  +  L     V  +CG   +  +T  G+++T G 
Sbjct: 497 GDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGR 556

Query: 511 AVHGQLGNPKAKD-RSITVVEGKLKEEFVK-GISSGSYHVAVLTSGGSVYTWGKNANGQL 568
              G+LG    +D  +  +V G L    V     SG      L   GSVY+WG    G+L
Sbjct: 557 GSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKL 616

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           G G S+  + P  V+ L+   V  V CG   +AA+C
Sbjct: 617 GRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVC 652



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  +++   L V  +  G++ +  +TK 
Sbjct: 4150 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDALQGLGVIKVECGSQFSVALTKS 4199

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH     +  P+    L G  + S++CG     A T +GE+YTWG 
Sbjct: 4200 GAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGD 4259

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G ++++VACG  H+   ST+
Sbjct: 4260 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHSLAWSTN 4303



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 36/288 (12%)

Query: 343  HGADLVGERRSRSHWLPRKLF--------DTLDGVRVS-----KVACGEWHTAIVSTSGQ 389
            HG  +VG  RS    +             +  +G R S     KV CG   + +     Q
Sbjct: 2859 HGMTIVGRLRSDDEEMAANFIFLASDNEEEEAEGQRASQVMAKKVKCG---SGVKDIQTQ 2915

Query: 390  LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            +F +G      LG      +  P   E+L  LK   +  G   + ++  +  D       
Sbjct: 2916 VFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGG---SKSLFCVTQD------- 2965

Query: 450  GGKLFTWGDADKGRLG------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             GKLF  G+A  GRLG      +V   R+L  T +++ V       S GR   + LT  G
Sbjct: 2966 -GKLFACGEATNGRLGLGISAGNVPQPRQL--TSLSQYVIKKVAVHSGGRH-AMALTVDG 3021

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            KV++ G    G+LG+    +     +   L+ + V+ I+ G  H A + S G +YTWG  
Sbjct: 3022 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLG 3081

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
              G+LG GD+  +  P  V+AL  ++V  V  GS     + L  S +V
Sbjct: 3082 EYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTV 3129



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + LT  G VY+ G+   G+LG+         ++  +L  + V  ++ GS+H A +T+ G 
Sbjct: 491 LALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGE 550

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
           ++TWG+ + G+LGLG +++  TP  V  L    V  V CGS     I L  + SV
Sbjct: 551 LFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSV 605


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 192/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  +Q I  G +    VT +G+++  G G 
Sbjct: 3854 GQLGG-IEGAKVKVPTPCEAL-------ATLRPIQLIG-GEQTLFAVTADGKLYATGYGA 3904

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 3905 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 3964

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 3965 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 4021

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4022 QLKPKLVEVLQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4072

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4132

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4133 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4188

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 4189 LQGKKVNRVACGSAHTLAWSTSKPASAG 4216



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 179/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 435 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 484

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      LP   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTLPLEE 538

Query: 361 -KLFDTLDGVR----VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +    V  +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 539 PKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D ++  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 648 TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 706

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  PT +  L  + +  
Sbjct: 707 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVG 766

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 767 IACGPAQSFA-----------WSSCSEWSIGLRVPF 791



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 25/286 (8%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3042

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3099

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3160 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3208

Query: 487  VQASCGRMLTVGLTGLGKVYT-----MGSAVHGQLGNPKAKDRSIT 527
             Q  CG   ++ LT  G V+T     + S VH  LG P   D S T
Sbjct: 3209 CQIECGAQFSLALTKSGVVWTWYVSFLLSPVH-LLGVPSDADSSAT 3253



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 480 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 525

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 526 GRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT-----------AEGELY 574

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 635 YGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 741



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 17/287 (5%)

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T   +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G++Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             G   +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F++G+
Sbjct: 3017 CGEATNGRLGLG-LSSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 3074

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G  G LGH +  N  +P+ +E+L+  +++ +ACG  H+AA+              G+L+T
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYT 3123

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVH 513
            WG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G+LG   ++  +I     +L  + V  I  G+     LT  G V+TW
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 3018 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 3138 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 3194

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAI 436
            + P+ +E L G  V  + CG   + A+
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 2955 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT------- 3064

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 3065 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 3178

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 18/276 (6%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3842 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPIQLIGGEQTLFAVTADGKLY 3898

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 3899 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 3949

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4009

Query: 512  VHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
             +G+LG+  ++D    + + V++G    +   G  SG      LT   +V++WG    G+
Sbjct: 4010 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACG--SGDAQTLCLTDDDTVWSWGDGDYGK 4067

Query: 568  LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G S   + P  +++L    V  V CGS  + A+
Sbjct: 4068 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4103



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198  ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
            + HR+V    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 4032 QGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 4083

Query: 258  SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
            S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 4084 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4143

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 4144 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 4200

Query: 378  EWHTAIVSTS 387
              HT   STS
Sbjct: 4201 SAHTLAWSTS 4210



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 591 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 650

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 651 LIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 702

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPTALPGL 759

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 760 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 796



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALTKD 676

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 737 NDQCQHFDTLRVTKPE--PTAL-PGLDTKHIVGIACG 770



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 2906 HGLILLGRIRAEEEDLAAVPFLASDNEEEDDDKGSSGSLIRKKAAGLESAATIRT--KVF 2963

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 2964 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------VEG 3012

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 3013 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3072

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 3073 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3132

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3133 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 244  NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
            N TQ+   + K+L    ++ V   S  A+  AL T EG VF WG+G  G+LG   +   +
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL-TDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 304  CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             P+ +E L+G  V  + CG   + ALTKSG ++TW
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 3976 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 4026

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 4027 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4086

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G  V  +A G  H+A ++ +G+L+T+G G +G LGHG+ ++
Sbjct: 4087 GNRSPCDR--PR-VIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSED 4143

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 4144 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 4194

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L      +  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4254

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 4255 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4310

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 4311 LQGKKINRVACGSAHTLAWSTSKPANAG 4338



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 173/363 (47%), Gaps = 26/363 (7%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 3046 LSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LG-HFSRMNCDKPRLIEALKT 3102

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 3163 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAV 3211

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV----KGIS 542
             Q  CG   ++ LT  G V+T     H         +  + +   K+   FV       +
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXT 3271

Query: 543  SGSY---HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
              +Y   ++  +     VY WG N +GQ G G +     PT V  L  +++  V CGSS 
Sbjct: 3272 CATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSH 3331

Query: 600  TAA 602
            + A
Sbjct: 3332 SVA 3334



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 171/392 (43%), Gaps = 74/392 (18%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      LG K   +VS P   E L+ + V  V+C E     L+++G++YT  +N
Sbjct: 424 EVISWG-----LLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYN 478

Query: 342 NH--GADLVGERRSRS-----------HWLPR---------------------------- 360
           N+  G  LV    SR+           H+L                              
Sbjct: 479 NNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEP 538

Query: 361 KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
           KL   L G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V 
Sbjct: 539 KLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVT 598

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L+GLKV  V+CG      +         S    G++++WGD D G+LG    +    P 
Sbjct: 599 GLKGLKVVDVSCGSGDAQTL---------SVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            + +L D D V+  CG   ++ +T  G+VY+ G   + +LG+   +      +   L+ +
Sbjct: 650 LIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGK 709

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  ++ GS H   LT  G VY+WG N   Q        +  P+ +  L  + +  + CG
Sbjct: 710 KVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCG 769

Query: 597 SSITAAICLHKSISVGDQSSCSQ----CRMPF 624
            + + A            SSCS+     R+PF
Sbjct: 770 PAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 138/294 (46%), Gaps = 25/294 (8%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
            G +HA  +T +G+VF WGEG DG+LGH   M+   P+L+E L    ++ ++CG   + A+
Sbjct: 3059 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 330  TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTS 387
            T SGE+YTWG   +G    G+  ++   L  K+   L G RV +VACG  +  T  ++  
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G +F++GDG FG LG G  +  + P+ +E L G  V  + CG   + A+           
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTK--------- 3226

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCV----TRLVDFDFVQASCGRMLTVGLTGL- 502
               G ++TW                LL   +     R V       +C     + +  + 
Sbjct: 3227 --SGVVWTWXXTKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIV 3284

Query: 503  --GKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
               KVY  G   HGQ GN     +R  T+V G L+ + +  ++ GS H    T+
Sbjct: 3285 ISKKVYAWGDNDHGQQGNGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVAWTT 3337



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 17/287 (5%)

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            T   +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G++Y 
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3019

Query: 338  WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             G   +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F++G+
Sbjct: 3020 CGEATNGRLGLG-ISSGTVPIPRQI-TALSNYVVKKVAVHSGGRHATALTVDGKVFSWGE 3077

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G  G LGH +  N  +P+ +E+L+  +++ +ACG  H+AAI              G+L+T
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-----------SGELYT 3126

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVH 513
            WG  + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186

Query: 514  GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G+LG   ++  +I     +L  + V  I  G+     LT  G V+TW
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 161/402 (40%), Gaps = 69/402 (17%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 3964 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 4020

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------------- 435
              G G  G LG G  ++VS P  +ES++ + +K VA   G  H  A              
Sbjct: 4021 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080

Query: 436  -------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD 468
                                     +VDI      S  I   G+L+TWG    GRLGH D
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGD 4140

Query: 469  GERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   +    +
Sbjct: 4141 SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV 4200

Query: 527  TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             +    L    V  +  GS     LT  G+VYTWGK    +LG G       P  V+ L+
Sbjct: 4201 PMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ 4260

Query: 587  DRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFRRKKHNC 633
             ++V ++  GS     +C  +   V             G  ++  + R+    + KK N 
Sbjct: 4261 GKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR 4318

Query: 634  YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
              CG     A ST K  NA   P++          YNHLQ+I
Sbjct: 4319 VACGSAHTLAWSTSKPANAGKLPSQ------VPMEYNHLQEI 4354



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 23/277 (8%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  
Sbjct: 2964 KVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTAEGKVYAC 3020

Query: 394  GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIG 450
            G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+            + 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALT-----------VD 3069

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G++YT G 
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL 3129

Query: 511  AVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              +G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFG 3187

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 3188 KLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLAL 3224



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WG+G  G    G  DG            +P  ++S   + V  +  G++ +  +TK G V
Sbjct: 4182 WGDGDYGKLGRGGSDG----------CKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAV 4231

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            + WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ 
Sbjct: 4232 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4291

Query: 344  GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 4292 GQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 4332



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 13/154 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+G  G    G  DG  +          PKL+E    LD+  +  G++ +  +TK+G+V
Sbjct: 629 WGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIAITKDGQV 678

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG+G + RLGH     V  PK++  L G  V  V+ G     ALT+SGE+Y+WG N+ 
Sbjct: 679 YSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQ 738

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
                  R ++   +P  +   LD   +  ++CG
Sbjct: 739 CQHFDTLRIAKP--VP-SVLPGLDSKHIVGISCG 769



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 114/277 (41%), Gaps = 27/277 (9%)

Query: 343  HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
            H  +LVG+ R+    +    F   D           G  V K   G   TA + T  ++F
Sbjct: 2909 HELNLVGQIRAEDEDMATVPFLASDNDEEDDDKASTGSFVRKKTAGLESTATIRT--KVF 2966

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             +G      LG      +  P   E+L  L V  VA G     A+              G
Sbjct: 2967 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----------AEG 3015

Query: 452  KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
            K++  G+A  GRLG  +      +P  +T L ++    V    G      LT  GKV++ 
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSW 3075

Query: 509  GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            G    G+LG+    +     +   LK + ++ I+ GS H A +TS G +YTWG    G+L
Sbjct: 3076 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 3135

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 3136 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 17/208 (8%)

Query: 244  NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
            N TQ+   + K+L    ++ V   S  A+  AL T EG VF WG+G  G+LG   +   +
Sbjct: 3140 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL-TDEGLVFSWGDGDFGKLGRGGSEGCN 3198

Query: 304  CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
             P+ +E L+G  V  + CG   + ALTKSG ++TW    H   L       ++ L  +LF
Sbjct: 3199 IPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHC--LAVXFYYXNYLL--ELF 3254

Query: 364  DTLDGVRVSKVACGEW----------HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
              L  V V  V  G++          +   +  S +++ +GD   G  G+G      +P 
Sbjct: 3255 --LIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTTVNRKPT 3312

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMV 441
             V  L G K+  VACG  H+ A   + V
Sbjct: 3313 LVHGLEGQKITRVACGSSHSVAWTTVDV 3340


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 768  GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 818

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 819  GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 878

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 879  GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 935

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 936  QLKPKLVEALQGHRVVDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 986

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 987  SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1046

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 1047 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 1102

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ ++V  V CGS+ T A    K  S G
Sbjct: 1103 LQGKKVNRVACGSAHTLAWSTSKPASAG 1130



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 10/196 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E+     +++I+ G+ H+A +T  GE++ WG G+ GRLGH  N     PK+V+ L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 313 GINVQSVSCG--EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           G  V  V+CG  + QT ALT  G +++WG  + G   +G   S    +P+ + + L+G  
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK--LGRGGSEGCNIPQNI-ERLNGQG 122

Query: 371 VSKVACGEWHTAIVSTSG-----QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           V ++ CG   +  ++ SG     Q++ +GD   G  G+G      +P  V+ L G K+  
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 426 VACGPWHTAAIVDIMV 441
           VACG  H+ A   + V
Sbjct: 183 VACGSSHSVAWTTVDV 198



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 20/201 (9%)

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
           +L + L   R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G
Sbjct: 7   RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 66

Query: 421 LKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +V  VACG     T A+ D            G +F+WGD D G+LG    E   +P  +
Sbjct: 67  HRVIQVACGSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNI 115

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLG-----KVYTMGSAVHGQLGNPKAK-DRSITVVEGK 532
            RL      Q  CG   ++ LT  G     +VY  G   HGQ GN     +R  T+V+G 
Sbjct: 116 ERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQG- 174

Query: 533 LKEEFVKGISSGSYHVAVLTS 553
           L+ + +  ++ GS H    T+
Sbjct: 175 LEGQKITRVACGSSHSVAWTT 195



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 18/202 (8%)

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
           N  +P+ +E+L+  +++ +ACG  H+AA+              G+L+TWG  + GRLGH 
Sbjct: 2   NCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLGEYGRLGHG 50

Query: 468 DGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
           D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    G+LG   ++  +
Sbjct: 51  DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 110

Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGG-----SVYTWGKNANGQLGLGDSQERETPT 580
           I     +L  + V  I  G+     LT  G      VY WG N +GQ G G +     PT
Sbjct: 111 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPT 170

Query: 581 FVEALRDRQVESVVCGSSITAA 602
            V+ L  +++  V CGSS + A
Sbjct: 171 LVQGLEGQKITRVACGSSHSVA 192



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
           M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+  ++   L 
Sbjct: 1   MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ---LK 57

Query: 360 RKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  + P+ +E 
Sbjct: 58  PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 117

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI-GGKLFTWGDADKGRLGHVDGERKLLPT 476
           L G  V  + CG   + A+        KS  +   +++ WGD D G+ G+        PT
Sbjct: 118 LNGQGVCQIECGAQFSLALT-------KSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPT 170

Query: 477 CVTRLVDFDFVQASCGRMLTVGLT 500
            V  L      + +CG   +V  T
Sbjct: 171 LVQGLEGQKITRVACGSSHSVAWT 194



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 756  SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 812

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
              G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 813  ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 863

Query: 452  KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 864  EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 923

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 924  RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 983

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S   + P  +++L    V  V CGS  + A+
Sbjct: 984  RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1017



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 17/212 (8%)

Query: 176  HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            H ++E+ +K +L  A       + HR+V    GS   +   +  D  +W  G   GD G 
Sbjct: 930  HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWG--DGDYGK 981

Query: 236  AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
               G     K      +P  ++S   L V  +  G++ +  +TK G V+ WG+G   RLG
Sbjct: 982  LGRGGSDGCK------VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG 1035

Query: 296  HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
            H  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  + +
Sbjct: 1036 HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNA 1093

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
               PR L   L G +V++VACG  HT   STS
Sbjct: 1094 IQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 1124



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 806

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
               GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 807 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 864

Query: 505 VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 865 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 922

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
              G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 923 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTV 971



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 40/73 (54%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           LK + ++ I+ GS H A LTS G +YTWG    G+LG GD+  +  P  V+ L   +V  
Sbjct: 12  LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ 71

Query: 593 VVCGSSITAAICL 605
           V CGS     + L
Sbjct: 72  VACGSRDAQTLAL 84



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGS 545
           +CG   +  LT  G++YT G   +G+LG+     + K + + V+ G    +   G  S  
Sbjct: 21  ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRD 78

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                LT  G V++WG    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 136


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 179/345 (51%), Gaps = 21/345 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +I+ G +H  +VT+ G +F +G  + G+LG   N   + P  V+ L    +  V+ G 
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGR 96

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           F T A+T S ++Y++G  + GA  +G        +P  + ++L+   V+ +ACG +H+A 
Sbjct: 97  FHTLAVTDSNKLYSFGQGSEGA--LGHGDETDLNMPTSI-ESLEDKDVNIIACGGYHSAA 153

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ +G+L+ +G  + G LG  N   +S P  ++   G  V SVACG +HTA +       
Sbjct: 154 ITKNGELYIWGSNSEGQLGLKN-DTISYPTMLD--LGKSVISVACGYYHTAVVT------ 204

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                  GKL+T+G+ + G+LG  D E  K+    V + +    V+ +CG   TV LT  
Sbjct: 205 -----ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTAS 259

Query: 503 GKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           G+VYT GS  +GQLG   K  D +I  +   L +  +K I+ G  H AV++  G ++T+G
Sbjct: 260 GQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFG 319

Query: 562 KNANGQLGLGDSQERE--TPTFVEALRDRQVESVVCGSSITAAIC 604
              +G+LG GD        P  V+ L++  V  + CG   T   C
Sbjct: 320 DGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVAC 364



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 91/387 (23%)

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E     + ++G ++T+G +       G+ R+   W+           +V+ +ACG+ HT 
Sbjct: 2   EVDDNDIPETGAVFTFGKSR-----FGDNRTNKFWIRSD--------KVTDIACGDEHTV 48

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +V+ +G+LFT+G+  +G LG G+ +  ++P  V++L+  K+  VA G +HT A+ D    
Sbjct: 49  VVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTD---- 104

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
              SN    KL+++G   +G LGH D     +PT +  L D D    +CG   +  +T  
Sbjct: 105 ---SN----KLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 503 GKVYTMGSAVHGQLG-------NPKAKDRSITVV--------------EGKL-------- 533
           G++Y  GS   GQLG        P   D   +V+              +GKL        
Sbjct: 158 GELYIWGSNSEGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEG 217

Query: 534 --------------KEEFVKGISS-------GSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
                         K + VKGIS        G  H   LT+ G VYT+G   NGQLGLG 
Sbjct: 218 GKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGS 277

Query: 573 S-QERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVGDQSSCSQC 620
              +   P  VEAL  R+++ + CG S TA +             H  +  GD+ S S  
Sbjct: 278 KIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDE-SFSNL 336

Query: 621 RMPFGFRRKKHNCYNCGLHF-CSACST 646
             P   +R K       LH  C  C T
Sbjct: 337 FKPVKVQRLKEFIV---LHIACGGCHT 360



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 157/315 (49%), Gaps = 41/315 (13%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T V AL P+         + +++ G  H   VT   +++ +G+G +G LGH    D++ P
Sbjct: 79  TTVKALKPE--------KITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMP 130

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
             +E L   +V  ++CG + + A+TK+GE+Y WG N+ G   +G +     +    + D 
Sbjct: 131 TSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQ--LGLKNDTISYPT--MLDL 186

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ--NVSQPKEVESLRGLKV 423
             G  V  VACG +HTA+V+  G+L+T+G+   G LG G+++   V++PK V+ + G KV
Sbjct: 187 --GKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KV 243

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL---LPTCVTR 480
             VACG  HT A+              G+++T+G    G+LG   G + +   +P  V  
Sbjct: 244 VKVACGGNHTVALT-----------ASGQVYTFGSGQNGQLGL--GSKIMDSNIPKLVEA 290

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-----VVEGKLKE 535
           L        +CG   T  ++  G+++T G   HG+LG     D S +     V   +LKE
Sbjct: 291 LSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQG---DESFSNLFKPVKVQRLKE 347

Query: 536 EFVKGISSGSYHVAV 550
             V  I+ G  H  V
Sbjct: 348 FIVLHIACGGCHTIV 362


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 175/357 (49%), Gaps = 33/357 (9%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEF 324
            ++ G +H A+++ +GE+F WG    G+LGH +N+    S P+ VE      +  +SCG  
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGE 1096

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
             + A+ +S +IY+WG + +G   +G        LP+K+ D   G +V  +A G  HT ++
Sbjct: 1097 HSVAVDQSFQIYSWGSSRYGQ--LGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 385  STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-----LRGLKVKSVACGPWHTAAIVDI 439
              SG LFT+G    G LG GN +N + P  +E+     + G ++ ++A G  H+   +D 
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLD- 1213

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                       G +++WG   KG+LGH + E+ L P  +  L     ++ SCG   TV +
Sbjct: 1214 ----------NGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAI 1263

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSG---- 554
            + L  VY  G   H  LGN   K+  S  ++E  + ++ ++ +  G YH A +T+     
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKK-IEKVVCGLYHTATVTAAENGS 1322

Query: 555  --GSVYTWGKNANGQLGLGDSQ-----ERETPTFVEALRDRQVESVVCGSSITAAIC 604
              G+VY  G   +G+LG G        ++  P  + +L    +     GS  +A I 
Sbjct: 1323 DRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIIT 1379



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 179/354 (50%), Gaps = 30/354 (8%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ +E+     +  IS G +H+  V +  +++ WG  + G+LGH V    + PK +E  +
Sbjct: 1077 PRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFT 1136

Query: 313  G-INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT----LD 367
            G   V +++ G   T  L KSG+++T+G N+ G   +G  ++R+  +P ++  +    + 
Sbjct: 1137 GGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRA--VPMRIETSEIVGIH 1194

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G R++ +A G  H+ +   +G ++++G  + G LGHGN++   +PK+++ L+G  +  ++
Sbjct: 1195 GERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKIS 1254

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            CG +HT AI ++             ++ WG  +   LG+   + +L P  +   ++    
Sbjct: 1255 CGHFHTVAISEL-----------NSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIE 1303

Query: 488  QASCGRMLTVGLTGL------GKVYTMGSAVHGQLGN-----PKAKDRSITVVEGKLKEE 536
            +  CG   T  +T        G VY  G   HG+LG          D+    V   L   
Sbjct: 1304 KVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSM 1363

Query: 537  FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
             + G SSGS   A++T+ G++YTWG    GQ+G G +++   PT + +L D++ 
Sbjct: 1364 NIVGFSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKI-SLNDQRF 1416



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 18/293 (6%)

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            SV+CG      ++  GE++TWG+N+ G    G    +    PR++ +T     +  ++CG
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRV-ETFKSSPIIMISCG 1094

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAI 436
              H+  V  S Q++++G   +G LGHG L   + PK++E   G  KV ++A G  HT  +
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 437  VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV--TRLVDFD---FVQASC 491
                          G LFT+G  D G+LG  + + + +P  +  + +V          + 
Sbjct: 1155 KK-----------SGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAA 1203

Query: 492  GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            G   ++     G +Y+ G+   GQLG+   +         +LK + +  IS G +H   +
Sbjct: 1204 GHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAI 1263

Query: 552  TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            +   SVY WG+  +  LG G ++   +P  +E   ++++E VVCG   TA + 
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVT 1316



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 24/207 (11%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            D+  WG    G    G ++ S+     Q+D L  K         +  IS G  H   +++
Sbjct: 1216 DIYSWGANSKGQLGHGNIEKSL--RPKQIDELKGK--------PIIKISCGHFHTVAISE 1265

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS------G 333
               V+CWG+G+   LG+  N +   PK++E      ++ V CG + T  +T +      G
Sbjct: 1266 LNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRG 1325

Query: 334  EIYTWGHNNH-----GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
             +Y  G   H     G DL      + H     +  +L+ + +   + G   +AI++ +G
Sbjct: 1326 NVYICGGGEHGKLGTGGDLKTPFFDKPH---PAVIPSLNSMNIVGFSSGSEFSAIITNNG 1382

Query: 389  QLFTYGDGTFGVLGHGNLQNVSQPKEV 415
             L+T+G G FG +G+G  +++  P ++
Sbjct: 1383 ALYTWGYGNFGQIGNGKTEDMWLPTKI 1409


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  160 bits (406), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 173/349 (49%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +     + D L+P ++       + ++  GA H  A   +E +V+ WG G  GRLGH
Sbjct: 50  DGQLGHGDAE-DRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGH 108

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + DV  P+ V  L GI ++ ++CG+    A+T  GE+ +WG N +G   +G   +   
Sbjct: 109 GNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQ--LGLGTTEDS 166

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+K+    +G+ V  +A G  HTA V+  G L+ +G G +G LG G+  +   P++V 
Sbjct: 167 LLPQKI-QAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVS 225

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            + G K+  +ACG  HT  +           +  G L+T+G +  G+LGH D E  L P 
Sbjct: 226 LVEGEKMVLIACGWRHTITV-----------SSSGILYTYGWSKYGQLGHGDFEDHLFPH 274

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L D    Q S G   T+ LT  GK+Y  G    GQ+G   + D    V      E+
Sbjct: 275 KVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQ 334

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  ++ G  H    T   +V+ WG+  +GQLG G+  +R  P  ++A+
Sbjct: 335 KVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAI 383



 Score =  152 bits (384), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 17/345 (4%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +S GA H+  +  EG V C WG G+DG+LGH    D   P ++       + SV CG   
Sbjct: 26  VSAGASHSVALL-EGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADH 84

Query: 326 TCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++   ++Y+WG  + G   +G   S   + P+ +   L G+++ ++ACG+ H   V
Sbjct: 85  TTAYSEEEQQVYSWGWGDFGR--LGHGNSSDVFTPQPV-RALQGIKIKQMACGDSHCLAV 141

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG G  ++   P+++++  G+ VK +A G  HTAA+ +      
Sbjct: 142 TMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTE------ 195

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G L+ WG    G LG  D   + +P  V+ +     V  +CG   T+ ++  G 
Sbjct: 196 -----DGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G + +GQLG+   +D         LK+     IS G  H   LTS G +Y WG N 
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNK 310

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            GQ+G GDS +  +P  V    +++V  V CG   T A    K++
Sbjct: 311 FGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNV 355



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGS 545
           V  S G   +V L     + + G    GQLG+  A+DR + TV+ G         I    
Sbjct: 24  VLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGAD 83

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +  A       VY+WG    G+LG G+S +  TP  V AL+  +++ + CG S   A+ +
Sbjct: 84  HTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTM 143


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 194/388 (50%), Gaps = 31/388 (7%)

Query: 231  GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
            G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 2182 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 2232

Query: 291  DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
             GRLG      VS P L+E +  + V+  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 2233 GGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2292

Query: 349  GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
            G R       PR + ++L G+ V  +A G  H+A ++ +G L+++G G +G LGHG+ ++
Sbjct: 2293 GNRSPCDR--PR-VVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSED 2349

Query: 409  VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 2350 QLKPKLVEALQGYRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 2400

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
             +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 2401 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 2460

Query: 525  SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 2461 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 2516

Query: 585  LRDRQVESVVCGSSITAAICLHKSISVG 612
            L+ +++  V CGS+ T A    K  + G
Sbjct: 2517 LQGKKINRVACGSAHTLAWSTSKPANAG 2544



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 177/384 (46%), Gaps = 47/384 (12%)

Query: 252  LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
            +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 1172 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITA 1231

Query: 311  LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
            LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 1232 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 1288

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 1289 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 1348

Query: 429  GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 1349 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 1397

Query: 487  VQASCGRMLTVGLTGLGKVYTMGSAVHGQL---------GNPKAKDRSITVVEGKLKEEF 537
             Q  CG   ++ LT  G V+T G    G+L         GN   + R        +   F
Sbjct: 1398 CQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPF 1457

Query: 538  VKGISS---GSYHVAVLTSGG----------------SVYTWGKNANGQLGLGDSQERET 578
               +S    G   V +  + G                 VY WG N +GQ G G +     
Sbjct: 1458 FGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRK 1517

Query: 579  PTFVEALRDRQVESVVCGSSITAA 602
            PT V+ L  +++  V CGSS + A
Sbjct: 1518 PTLVQGLEGQKITRVACGSSHSVA 1541



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 180/396 (45%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 139 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYV----------QAYNSDTLG 188

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  V+         AL  +GE+++WG  + G      R      +P   
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGG------RLGHGDTVPLEE 242

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+   L G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 243 PKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 302

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  V+CG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 303 TGLKGLKVIDVSCGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 351

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 352 TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 410

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 411 LQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVG 470

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 471 IACGPAQSFA-----------WSSCSEWSIGLRVPF 495



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 165/353 (46%), Gaps = 48/353 (13%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
            G A +G +    +     LP+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 1207 GEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LGH   M+   P+L+E L    ++ ++CG   + A+T SGE+YTWG   +G    G+ 
Sbjct: 1267 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 1326

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
             ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 1327 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 1383

Query: 410  SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL----- 464
            + P+ +E L G  V  + CG   + A+              G ++TWG  D G L     
Sbjct: 1384 NVPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWGRGDFGELRPDSH 1432

Query: 465  ----GHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTVGL---TGLG------------ 503
                G+V    ++     C+  L  F  V         VG+   +G+             
Sbjct: 1433 IVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRER 1492

Query: 504  --KVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
              +VY  G   HGQ GN     +R  T+V+G L+ + +  ++ GS H    T+
Sbjct: 1493 QLEVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 1544



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 143/291 (49%), Gaps = 17/291 (5%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G++Y  G  
Sbjct: 1150 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 1209

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
             +G   +G   S +  LPR++   L    V KVA   G  H   ++  G++F++G+G  G
Sbjct: 1210 TNGRLGLG-ISSGTVPLPRQI-TALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 1267

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGH +  N  +P+ +E+L+  +++ +ACG  H+AAI              G+L+TWG  
Sbjct: 1268 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-----------SGELYTWGLG 1316

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLG 517
            + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    G+LG
Sbjct: 1317 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 1376

Query: 518  NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
               ++  ++     +L  + V  I  G+     LT  G V+TWG+   G+L
Sbjct: 1377 RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 160/408 (39%), Gaps = 69/408 (16%)

Query: 326  TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            T +   SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVT 2220

Query: 386  TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAA-------- 435
              G+L+  G G  G LG G  ++VS P  +ES++ + VK VA   G  H  A        
Sbjct: 2221 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVY 2280

Query: 436  -------------------------------IVDIMVDRCKSNAI--GGKLFTWGDADKG 462
                                           +VDI      S  I   G L++WG    G
Sbjct: 2281 SWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYG 2340

Query: 463  RLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            RLGH D E +L P  V  L  +  +  +CG     T+ LT    V++ G   +G+LG   
Sbjct: 2341 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400

Query: 521  AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +    + +    L    V  +  GS     LT  G+VYTWGK    +LG G       P 
Sbjct: 2401 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 2460

Query: 581  FVEALRDRQVESVVCGSSITAAICLHKSISV-------------GDQSSCSQCRMPFGFR 627
             V+ L+ ++V ++  GS     +C  +   V             G  ++  + R+    +
Sbjct: 2461 QVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 2518

Query: 628  RKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKI 675
             KK N   CG     A ST K  NA   P +          YNHL +I
Sbjct: 2519 GKKINRVACGSAHTLAWSTSKPANAGKLPTQ------VPMEYNHLPEI 2560



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 1144 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 388  GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
            G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALT------- 1253

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                + GK+F+WG+ D G+LGH        P  +  L        +CG   +  +T  G+
Sbjct: 1254 ----VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 1309

Query: 505  VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 1310 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 1367

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 1368 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 1410



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 13/167 (7%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+G  G    G  DG            +P  ++S   L V  +  G++ +  +TK 
Sbjct: 2385 VWSWGDGDYGKLGRGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKS 2434

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG+G   RLGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG 
Sbjct: 2435 GAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 2494

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+  + +   PR L   L G ++++VACG  HT   STS
Sbjct: 2495 NDEGQ--LGDGTTNAIQRPR-LVAALQGKKINRVACGSAHTLAWSTS 2538



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V ++S G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 295 DQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 354

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  +++  V CG   + ALTK G++Y+WG  +     HG        +  H    K
Sbjct: 355 LIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG--------TEEHVRYPK 406

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   +++P+   +L GL
Sbjct: 407 LLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKPQP-SALPGL 463

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 464 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVC 500



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LD+  +  G++ +  +TK+
Sbjct: 331 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIALTKD 380

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 381 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGS 440

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 441 NDQCQHFDTLRITKPQ--PSAL-PGLDTKHIVGIACG 474



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 16/241 (6%)

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            G  + K A G    A + T  ++F +G      LG      +  P   E+L  L V  VA
Sbjct: 1131 GSLIRKKASGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 1188

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF 486
             G     A+            + GK++  G+A  GRLG  +      LP  +T L ++  
Sbjct: 1189 GGSKSLFAVT-----------VEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVV 1237

Query: 487  --VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              V    G    + LT  GKV++ G    G+LG+    +     +   LK + ++ I+ G
Sbjct: 1238 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACG 1297

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H A +TS G +YTWG    G+LG GD+  +  P  V+ L   +V  V CGS     + 
Sbjct: 1298 SSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 1357

Query: 605  L 605
            L
Sbjct: 1358 L 1358


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 181/360 (50%), Gaps = 26/360 (7%)

Query: 253 PKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           PKL+ES    + ++ +  G  H+A++T  GE+  WG G  G+LG     D+  P+++  +
Sbjct: 32  PKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSI 91

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---KLFDTLDG 368
              NV +VSC +  + A+ + G +YTWG N  G   +G      +       +L + L  
Sbjct: 92  K--NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLN 149

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            +V KV+CG +HTA ++   + +T+G G  G LGHG+  +V  PK +ESL GL VK++ C
Sbjct: 150 EKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVC 209

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFV 487
           G  HTA +++            GK++  G    G+LG    E   +P  +   L +    
Sbjct: 210 GGHHTAILLN-----------NGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIK 258

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISS 543
           + S G   +  +T  GKVYT G    G+LG+    P+    S  +VE KL       IS 
Sbjct: 259 EVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILSPKLVE-KLNSIIAVNISC 315

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  H  V+++ G VY WG   N   G+ DS+  + PT    L+++ +  V CG + T A+
Sbjct: 316 GHSHTVVISNIGDVYAWGVTRNLGHGVIDSKPND-PTLHPILQNKNIVQVSCGKTHTIAL 374



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 151/330 (45%), Gaps = 25/330 (7%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHN 341
           V  WG  + G+LG         PKL+E L   N ++ V CG   +  +T SGE+  WG+ 
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
             G   +G+ +     +PR +    + + VS   C + H+A +   G+L+T+G    G L
Sbjct: 70  GCGQLGLGDLKDIV--IPRVMTSIKNVINVS---CSDRHSAAILEDGRLYTWGCNKSGKL 124

Query: 402 GHGNLQNVSQ------PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G G+L           P+ VE L   KV  V+CG +HTA + D+            K +T
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDL-----------NKAYT 173

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG   +GRLGH D      P  +  L         CG   T  L   GKVY  G    G+
Sbjct: 174 WGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGK 233

Query: 516 LGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN-GQLGLGDS 573
           LG    +D  I  +++G L  + +K +S G  H AV+T+ G VYTWG+    G +  G  
Sbjct: 234 LGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPE 293

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
            +  +P  VE L      ++ CG S T  I
Sbjct: 294 PDILSPKLVEKLNSIIAVNISCGHSHTVVI 323



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 21/254 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E  +   V  +S G+ H A +T   + + WG G  GRLGH    DV  PKL+E L+
Sbjct: 141 PQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLA 200

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           G++V+++ CG   T  L  +G++Y  G    G    G +     ++P+ L  +L    + 
Sbjct: 201 GLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDI--YIPKLLQGSLTNKSIK 258

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGH---GNLQNVSQPKEVESLRGLKVKSVACG 429
           +V+ G  H+A+++T G+++T+G G  G LGH   G   ++  PK VE L  +   +++CG
Sbjct: 259 EVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCG 316

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQ 488
             HT  I +I           G ++ WG      LGH V   +   PT    L + + VQ
Sbjct: 317 HSHTVVISNI-----------GDVYAWGVTR--NLGHGVIDSKPNDPTLHPILQNKNIVQ 363

Query: 489 ASCGRMLTVGLTGL 502
            SCG+  T+ L+ +
Sbjct: 364 VSCGKTHTIALSDI 377



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 23/283 (8%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           A  KSG +  WG + +G   +G     S+  P+ +       R+ +V CG  H+A+++ S
Sbjct: 4   APVKSG-VVAWGSSEYGQ--LGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHS 60

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+L  +G G  G LG G+L+++  P+ + S++   V +V+C   H+AAI++         
Sbjct: 61  GELIVWGYGGCGQLGLGDLKDIVIPRVMTSIK--NVINVSCSDRHSAAILE--------- 109

Query: 448 AIGGKLFTWGDADKGRLG------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
              G+L+TWG    G+LG      +++      P  V +L++   ++ SCG   T  LT 
Sbjct: 110 --DGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTD 167

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           L K YT G  + G+LG+    D     +   L    VK I  G +H A+L + G VY  G
Sbjct: 168 LNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCG 227

Query: 562 KNANGQLGLGDSQERETPTFVE-ALRDRQVESVVCGSSITAAI 603
             A G+LG G  ++   P  ++ +L ++ ++ V  G   +A I
Sbjct: 228 GGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVI 270



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 12/142 (8%)

Query: 249 DALLPKLLESAVM-LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM---DVSC 304
           D  +PKLL+ ++    ++ +SLG +H+A++T +G+V+ WG+G  GRLGH  N    D+  
Sbjct: 241 DIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILS 298

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG-HNNHGADLVGERRSRSHWLPRKLF 363
           PKLVE L+ I   ++SCG   T  ++  G++Y WG   N G  ++  + +     P    
Sbjct: 299 PKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLGHGVIDSKPNDPTLHP---- 354

Query: 364 DTLDGVRVSKVACGEWHTAIVS 385
             L    + +V+CG+ HT  +S
Sbjct: 355 -ILQNKNIVQVSCGKTHTIALS 375


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 178/353 (50%), Gaps = 27/353 (7%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
           SA +  V  IS GA H+  +     V  WG G+DG+LGH    D   P  +  L G  V 
Sbjct: 12  SAPVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVV 71

Query: 318 SVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           SV+CG   T A ++S  ++Y+WG      DL           P+ +   L G+R+ ++AC
Sbjct: 72  SVTCGADHTTAYSESFTQVYSWG-----CDLF---------TPQPI-KALHGLRIKQIAC 116

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G+ H   V+  G++ ++G    G LG G  ++   P+++++ +G+ VK VA G  HTAA+
Sbjct: 117 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 176

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
            +            G+L+ WG    G LG  D   +L+P  V+ +     V+ +CG   T
Sbjct: 177 TE-----------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHT 225

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + ++  G +YT G + +GQLG+   +D         L+E  +  IS G  H   LTS G 
Sbjct: 226 ISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGK 285

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           +Y WG N  GQ+G+GD+ +  +P  V+   +++V  + CG   T A+   +++
Sbjct: 286 LYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNV 338



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 28/349 (8%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE-GEVFCWGEGKDGRLGH 296
           DG +     + D L P  L +    +V +++ GA H    ++   +V+ WG         
Sbjct: 45  DGQLGHGDAE-DRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWG--------- 94

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               D+  P+ ++ L G+ ++ ++CG+    A+T  GE+ +WG N +G   +G   +   
Sbjct: 95  ---CDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQ--LGLGTTEDS 149

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+     GV V  VA G  HTA V+  G+L+ +G G +G LG G+  +   P++V 
Sbjct: 150 LVPQKI-QAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS 208

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++ G+K+  VACG  HT ++           +  G L+T+G +  G+LGH D E  L P 
Sbjct: 209 TVEGVKMVKVACGWRHTISV-----------SSSGGLYTYGWSKYGQLGHGDFEDHLTPH 257

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L +    + S G   T+ LT  GK+Y  G    GQ+G     D    V      E+
Sbjct: 258 KLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ 317

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  IS G  H   +T   +V++WG+  NGQLG G+S +R  P  +E L
Sbjct: 318 KVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 366



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V +IS G +H   VT+   VF WG G +G+LGH  ++D + PK++E LS
Sbjct: 319 VVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 367


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +    ++ D  +P +L S  +  V ++  GA H  A    E +++ WG G  GRLGH
Sbjct: 50  DGQLGHGDSE-DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGH 108

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + DV  P+ +  L G+ ++ ++CG+     +T +G++++WG N +G   +G   ++  
Sbjct: 109 GNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQ--LGLGNNQDS 166

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+K+    +GV V  +A G  HT  ++  G L+ +G G +G LG  +  + S P++V 
Sbjct: 167 LLPQKI-KAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS 225

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+ G K+  VACG  H+ ++           +  G L+T+G +  G+LGH D +  L+P 
Sbjct: 226 SVEGEKMVLVACGWRHSVSV-----------SSSGALYTYGWSKYGQLGHGDFQDHLVPR 274

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L D    Q S G   T+ +   GK+Y  G    GQ+G     D    V      E+
Sbjct: 275 KLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ 334

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            +  ++ G  H   LT   ++++WG+ A+GQLG G+  +R TP  ++AL
Sbjct: 335 KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 19/362 (5%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+  E +V+L    IS GA H+A +     V  WG G+DG+LGH  + D   P ++
Sbjct: 12  DEAVPEAPEQSVIL----ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVL 67

Query: 309 ECLSGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
                  V SV CG   T A +    ++Y+WG  + G   +G   S   + P+ +   L 
Sbjct: 68  TSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGR--LGHGNSSDVFNPQPIV-ALQ 124

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G+++ ++ACG+ H   V+ +GQ+ ++G    G LG GN Q+   P+++++  G+ VK +A
Sbjct: 125 GMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIA 184

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            G  HT AI +           GG L+ WG    G LG  D + + +P  V+ +     V
Sbjct: 185 AGAEHTTAITE-----------GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMV 233

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             +CG   +V ++  G +YT G + +GQLG+   +D  +      LK+  +  IS G  H
Sbjct: 234 LVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRH 293

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
              +   G +Y WG N  GQ+G+ D+ +  +P  V    ++++  V CG   T A+  +K
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENK 353

Query: 608 SI 609
           +I
Sbjct: 354 NI 355



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           +  ++ G +H   +T+   +F WG G  G+LGH   +D + PK+++ LS
Sbjct: 336 IVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 16/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGH 296
           DG +    ++ D  +P +L S  +  V ++  GA H  A    E +++ WG G  GRLGH
Sbjct: 50  DGQLGHGDSE-DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGH 108

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + DV  P+ +  L G+ ++ ++CG+     +T +G++++WG N +G   +G   ++  
Sbjct: 109 GNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQ--LGLGNNQDS 166

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+K+    +GV V  +A G  HT  ++  G L+ +G G +G LG  +  + S P++V 
Sbjct: 167 LLPQKI-KAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS 225

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S+ G K+  VACG  H+ ++           +  G L+T+G +  G+LGH D +  L+P 
Sbjct: 226 SVEGEKMVLVACGWRHSVSV-----------SSSGALYTYGWSKYGQLGHGDFQDHLVPR 274

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            +  L D    Q S G   T+ +   GK+Y  G    GQ+G     D    V      E+
Sbjct: 275 KLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQ 334

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            +  ++ G  H   LT   ++++WG+ A+GQLG G+  +R TP  ++AL
Sbjct: 335 KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 19/362 (5%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+  E +V+L    IS GA H+A +     V  WG G+DG+LGH  + D   P ++
Sbjct: 12  DEAVPEAPEQSVIL----ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVL 67

Query: 309 ECLSGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
                  V SV CG   T A +    ++Y+WG  + G   +G   S   + P+ +   L 
Sbjct: 68  TSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGR--LGHGNSSDVFNPQPIV-ALQ 124

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G+++ ++ACG+ H   V+ +GQ+ ++G    G LG GN Q+   P+++++  G+ VK +A
Sbjct: 125 GMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIA 184

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            G  HT AI +           GG L+ WG    G LG  D + + +P  V+ +     V
Sbjct: 185 AGAEHTTAITE-----------GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMV 233

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             +CG   +V ++  G +YT G + +GQLG+   +D  +      LK+  +  IS G  H
Sbjct: 234 LVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRH 293

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
              +   G +Y WG N  GQ+G+ D+ +  +P  V    ++++  V CG   T A+  +K
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENK 353

Query: 608 SI 609
           +I
Sbjct: 354 NI 355



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           +  ++ G +H   +T+   +F WG G  G+LGH   +D + PK+++ LS
Sbjct: 336 IVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 181/377 (48%), Gaps = 30/377 (7%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           GG   G ++++   V+  +P + +S  +   Q +  G     +V   G +   GEG  GR
Sbjct: 494 GGGRHGQLAESGRGVN--VPTVTKS--LASAQQVVCGQNCTFVVQVNGTILACGEGSYGR 549

Query: 294 LGHKVNMDVSCPKLVECLSG---INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
           LG   + D+     +  L G   I + +    +  + ALT SGE+++WG  ++G   +G 
Sbjct: 550 LGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK--LGH 607

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             S     PR++ + L G  V  +ACG  H+A+V+  G+LFT+G+G +G LGHGN  N  
Sbjct: 608 GNSDRQRRPRQI-EALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKK 666

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P+ V +L    +  VACG  HT  +          +A G  ++ +GD D G+LG     
Sbjct: 667 TPERVTALEKHAIGQVACGLNHTLVL----------SADGNTVWAFGDGDYGKLGLGSCT 716

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG-----SAVHGQLGNPKAKDRS 525
            K  P  +  L      +  CG   +V LT  G+V++ G         G+L  P+ K + 
Sbjct: 717 AKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQ-KPQQ 775

Query: 526 ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           I      L   F+  +  G+ HV  LTS G V+ WG N +GQLGLG S  +  P  +  L
Sbjct: 776 IQA----LASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPDL 831

Query: 586 RDRQVESVVCGSSITAA 602
           + + +  +  G + +AA
Sbjct: 832 KGKNIRQISAGRNHSAA 848



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           + Y WG   HG      R      + + L          +V CG+  T +V  +G +   
Sbjct: 489 DAYLWGGGRHGQLAESGRGVNVPTVTKSL------ASAQQVVCGQNCTFVVQVNGTILAC 542

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG---PWHTAAIVDIMVDRCKSNAIG 450
           G+G++G LG GN  ++     + +L+G  V  +A       H+ A+ D            
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTD-----------S 591

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G++F+WGD D G+LGH + +R+  P  +  L   + V  +CG   +  +T  GK++T G+
Sbjct: 592 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGN 651

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS-GGSVYTWGKNANGQLG 569
             +G+LG+  + ++        L++  +  ++ G  H  VL++ G +V+ +G    G+LG
Sbjct: 652 GDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLG 711

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           LG    + +P  ++ L     + + CG+  +  +
Sbjct: 712 LGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVL 745



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 450 GGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           GGK   + WG    G+L    G    +PT    L      Q  CG+  T  +   G +  
Sbjct: 485 GGKCDAYLWGGGRHGQLAE-SGRGVNVPTVTKSLASAQ--QVVCGQNCTFVVQVNGTILA 541

Query: 508 MGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            G   +G+LG   + D      I+ ++G +  +      S  + +A LT  G V++WG  
Sbjct: 542 CGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLA-LTDSGEVFSWGDG 600

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             G+LG G+S  +  P  +EALR  +V ++ CG   +A + +
Sbjct: 601 DYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTV 642


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +GG ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G 
Sbjct: 234 GQLGG-IEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGA 284

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
            GRLG      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    
Sbjct: 285 GGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 344

Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
           G R       PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++
Sbjct: 345 GNRSPCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED 401

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
             +PK VE+L+G +V  +ACG      +       C ++     +++WGD D G+LG   
Sbjct: 402 QLKPKLVEALQGHRVIDIACGSGDAQTL-------CLTD--DDTVWSWGDGDYGKLGRGG 452

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDR 524
            +   +P  +  L     V+  CG   +V LT  G VYT G   + +LG+       + R
Sbjct: 453 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 512

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
            +  ++GK     V  I++GS H    T  G VYTWG N  GQLG G +   + P  V A
Sbjct: 513 QVQGLQGKK----VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 568

Query: 585 LRDRQVESVVCGSSITAAICLHKSISVG 612
           L+ ++V  V CGS+ T A    K  S G
Sbjct: 569 LQGKKVNRVACGSAHTLAWSTSKPASAG 596



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 222 SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 278

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 279 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 329

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 389

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 449

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G S   + P  +++L    V  V CGS  + A+
Sbjct: 450 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 483



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)

Query: 198 ESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE 257
           + HR++    GS   +   +  D  +W  G   GD G    G     K      +P  ++
Sbjct: 412 QGHRVIDIACGSGDAQTLCLTDDDTVWSWG--DGDYGKLGRGGSDGCK------VPMKID 463

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
           S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  V 
Sbjct: 464 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 523

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VACG
Sbjct: 524 AIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVACG 580

Query: 378 EWHTAIVSTS 387
             HT   STS
Sbjct: 581 SAHTLAWSTS 590



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG ++ +G    G LG      V  P   E+L  L+   +  G     A+          
Sbjct: 222 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 272

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
               GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 273 --ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 330

Query: 505 VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 331 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 388

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
              G+LG  DS+++  P  VEAL+  +V  + CGS     +CL    +V
Sbjct: 389 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTV 437


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 196/397 (49%), Gaps = 40/397 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQN--KTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           V  WG G  G  +G    GS  +   ++  + L P++LE+    ++  +  GA H+A + 
Sbjct: 7   VFTWGTGTQG-QLG---HGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAID 62

Query: 279 KEGEVFCWGEGKDGRLGH-KVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           KEG+++ WG  +  +LGH   N D+ S P++V+ L GI +  +SCGE+ T A+ + G+++
Sbjct: 63  KEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLF 122

Query: 337 TWGHNN---HGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWHTAIVSTSGQLFT 392
           TWG       G+  +G        +PR +   +D GV V  V CGE HT  ++  G+++ 
Sbjct: 123 TWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWA 182

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G+G +G LG+G   N   P+ VE      + S++ G   T AI +            G+
Sbjct: 183 WGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH-----------GE 231

Query: 453 LFTWGDADKGRLGHVDG------ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +++WG     +LG   G        + +P  V  L + +  Q S G      +T  GK++
Sbjct: 232 VYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMF 291

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G+ +         +   +T+    LK+E +  +  G Y+ A L++ G+++T+GK  + 
Sbjct: 292 MWGAKL-------WLEPHEMTI----LKDETIISVQCGRYYTAALSASGNLFTFGKGHSN 340

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG G+ + +  P  VE+L    V S+ CG S   A+
Sbjct: 341 CLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGAL 377



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 184/416 (44%), Gaps = 66/416 (15%)

Query: 283 VFCWGEGKDGRLGH--------KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           VF WG G  G+LGH        + + +   P+++E   G N+  +  G   + A+ K G+
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGK 66

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +YTWG N +     G        +PR + D L G+++  ++CGE+HT  V   G+LFT+G
Sbjct: 67  LYTWGSNEYHQLGHGSSNQDIQSIPR-VVDALRGIKIVDISCGEYHTGAVDEEGKLFTWG 125

Query: 395 DG-----TFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G       G LGH   ++ S P+ V +L  +G+ VKSV CG  HT A+           
Sbjct: 126 WGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTK--------- 176

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              G+++ WG+ + GRLG+   +   +P  V    D +    S GR  T  +T  G+VY+
Sbjct: 177 --DGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYS 234

Query: 508 MGSAVHGQLGNPKA------KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G   H QLG             +I VV   L    V  +S+G  H A +T+ G ++ WG
Sbjct: 235 WGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
                +L L        P  +  L+D  + SV CG   TAA+    ++            
Sbjct: 295 A----KLWL-------EPHEMTILKDETIISVQCGRYYTAALSASGNL------------ 331

Query: 622 MPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTC-YNHLQKIT 676
             F F +   NC   G         K  +   L  +  + + V  TC Y+H+  +T
Sbjct: 332 --FTFGKGHSNCLGHG-------ERKTQLQPLLVESLNRYNVVSMTCGYSHMGALT 378



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 129/316 (40%), Gaps = 42/316 (13%)

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVS--------QPKEVESLRGLKVKSVACGPWHTAA 435
           +ST   +FT+G GT G LGHG+ +            P+ +E+  G  +  +  G  H+AA
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGR 493
           I     D+       GKL+TWG  +  +LGH    + +  +P  V  L     V  SCG 
Sbjct: 61  I-----DKE------GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGE 109

Query: 494 MLTVGLTGLGKVYTMGSAVH-----GQLGNPKAKDRSITVVEGKLKEEFV--KGISSGSY 546
             T  +   GK++T G         G LG+   +D SI  +   L ++ V  K +  G  
Sbjct: 110 YHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGEL 169

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH 606
           H   LT  G ++ WG    G+LG G S   E P  VE   D  + S+  G   T AI  H
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229

Query: 607 KSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCD 666
             +     +S SQ  +  G     +N     +    A S   +   S             
Sbjct: 230 GEVYSWGINSHSQLGLGGGLTVDYYNMETIPV-VVEALSNVNVAQVS------------- 275

Query: 667 TCYNHLQKITHSGRLL 682
             Y+H   +T+ G++ 
Sbjct: 276 AGYDHAAAVTNDGKMF 291



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 41/121 (33%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWG------------------------ 287
           +P ++E+   ++V  +S G  HAA VT +G++F WG                        
Sbjct: 259 IPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCG 318

Query: 288 -----------------EGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
                            +G    LGH        P LVE L+  NV S++CG     ALT
Sbjct: 319 RYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALT 378

Query: 331 K 331
           K
Sbjct: 379 K 379


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 166/317 (52%), Gaps = 22/317 (6%)

Query: 302 VSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
           VS P L+E +  ++++  +V+ G     AL+  GE+++WG    G    G R S     P
Sbjct: 375 VSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDR--P 432

Query: 360 RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
           R + ++L G  V  +A G  H+A ++++G+LFT+G G +G LGHG+ ++  +PK VE+L+
Sbjct: 433 R-VIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALK 491

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
           G++V  VACG      +       C ++     +++WGD D G+LG    +   +P  V 
Sbjct: 492 GVRVIDVACGSGDAQTL-------CITD--DDSVWSWGDGDYGKLGRGGSDGCKIPQKVE 542

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKE 535
            L+    V+  CG   +V LT  G VYT G   + +LG+       + R +  ++GK   
Sbjct: 543 ALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGK--- 599

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
             V  I++GS H    T  G V+TWG N  GQLG G +     P  V AL+ +++  V C
Sbjct: 600 -NVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVAC 658

Query: 596 GSSITAAICLHKSISVG 612
           GS+ + A    K ++ G
Sbjct: 659 GSAHSLAWSTSKPVNAG 675



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 148/303 (48%), Gaps = 26/303 (8%)

Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           P LLES   + ++ +++  G KH   ++ EGEVF WGE +DG+LGH        P+++E 
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G  V  ++ G   +  +T +GE++TWG   +G   +G   S     P KL + L GVR
Sbjct: 438 LRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGR--LGHGDSEDQMKP-KLVEALKGVR 494

Query: 371 VSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           V  VAC  G+  T  ++    ++++GDG +G LG G       P++VE+L G  V  V C
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   + A+              G ++TWG  D  RLGH   +    P  V  L   + + 
Sbjct: 555 GSQFSVALTK-----------SGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVIS 603

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSG 544
            + G +  V  T  G+V+T G    GQLG+       + R +  ++GK     +  ++ G
Sbjct: 604 IATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKK----INRVACG 659

Query: 545 SYH 547
           S H
Sbjct: 660 SAH 662



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 163/414 (39%), Gaps = 85/414 (20%)

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T +   SG+I+ WGHN+ G   +G        LP    D L  +R  ++  GE     V 
Sbjct: 301 TLSWGGSGQIWGWGHNHRGQ--LGGVEGAKVKLPTPC-DALAALRPVQLIGGEQTLFAVY 357

Query: 386 TSG------------------------------------------------QLFTYGDGT 397
            +G                                                ++F++G+  
Sbjct: 358 ATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE 417

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGHGN  +  +P+ +ESLRG +V  +A G  H+A I              G+LFTWG
Sbjct: 418 DGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITST-----------GELFTWG 466

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQ 515
               GRLGH D E ++ P  V  L     +  +CG     T+ +T    V++ G   +G+
Sbjct: 467 KGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGK 526

Query: 516 LGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           LG   +    I   VE  + +  VK +  GS     LT  G VYTWGK    +LG G   
Sbjct: 527 LGRGGSDGCKIPQKVEALIGQGVVK-VECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDD 585

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKS------------ISVGDQSSCSQCRM 622
               P  V AL+ + V S+  G S+    C  +             +  G  S+  + R+
Sbjct: 586 HVRRPRKVAALQGKNVISIATG-SLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRL 644

Query: 623 PFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKIT 676
               + KK N   CG     A ST K +NA   P +          YNHLQ IT
Sbjct: 645 VAALQGKKINRVACGSAHSLAWSTSKPVNAGKLPVQ------VPMEYNHLQNIT 692


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 177/355 (49%), Gaps = 34/355 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G  H   VT++GEV  WG G +G+LG     D + P +V+ LS   V  V+CG + T
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             +T  G +  WG  N G   +G+    S  LPR +  TL   ++ ++ACG  HT  +S 
Sbjct: 135 AVVTDVGLVMCWGKGNSGQ--LGQGDWTSSLLPRTV-STLYNEKIRQIACGMAHTLALSV 191

Query: 387 SGQLFTYGDGTFGVLGHGNLQ----NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +G+++++G G  G LG G  Q    +V+ P++V      K + +ACG  H  AI     D
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAI----TD 247

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-FDFVQASCGRMLTVGLTG 501
            C       +LF+WG    GRLG  D E +  PT V R ++       + G   T  L+ 
Sbjct: 248 DC-------RLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSD 300

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGK-------------LKEEFVKGISSGSYHV 548
            G+++T G   +GQLG+  A D  +T+ + +             L+++ +   + G  H 
Sbjct: 301 NGEIFTCGRGSYGQLGHGDA-DPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHT 359

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            V+++ G V+ WG   +GQLG G ++   +P  + +LR   V  V CG   +AA+
Sbjct: 360 LVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTSLRG-LVGDVSCGLVHSAAV 413



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 152/324 (46%), Gaps = 40/324 (12%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P ++++     V  ++ G  H A+VT  G V CWG+G  G+LG         P+ V
Sbjct: 109 DQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTV 168

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL--PRKLFDTL 366
             L    ++ ++CG   T AL+ +GEIY+WG    G   VG+ +  +  +  P+K     
Sbjct: 169 STLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQK----- 223

Query: 367 DGVRVSK------VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLR 419
             VRV +      +ACG  H   ++   +LF++G G  G LG G+ ++   P  V  S+ 
Sbjct: 224 --VRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIE 281

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE--------R 471
            L++  VA G  HTA + D            G++FT G    G+LGH D +        R
Sbjct: 282 NLRICYVAAGGHHTAVLSD-----------NGEIFTCGRGSYGQLGHGDADPQLTLKKAR 330

Query: 472 KLLPTC----VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
            L   C    + +L D   ++A+CG   T+ ++  G+V+  G+A  GQLG    +  +  
Sbjct: 331 ALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSP 390

Query: 528 VVEGKLKEEFVKGISSGSYHVAVL 551
           V    L+   V  +S G  H A +
Sbjct: 391 VELTSLR-GLVGDVSCGLVHSAAV 413



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 99/231 (42%), Gaps = 34/231 (14%)

Query: 394 GDGTFGVLGHGNLQNVSQPKEV-----------------ESLRGLKVKSVACGPWHTAAI 436
           G G FG LGHG+  +  +PK +                 ESL G     VACG  HT A+
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNG--AIYVACGGHHTVAV 85

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
            +            G++ +WG  ++G+LG  +   + +P  V  L +      +CG   T
Sbjct: 86  TE-----------DGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
             +T +G V   G    GQLG        +      L  E ++ I+ G  H   L+  G 
Sbjct: 135 AVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGE 194

Query: 557 VYTWGKNANGQLGLGDSQER----ETPTFVEALRDRQVESVVCGSSITAAI 603
           +Y+WG  A+GQLG+G  QE      TP  V    + + E + CGS    AI
Sbjct: 195 IYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAI 245



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 84/181 (46%), Gaps = 26/181 (14%)

Query: 450 GGK---LFTWGDADKGRLGHVDGERKLLPTCVTRL-------VDFDF-----------VQ 488
           GGK   L  WG+   GRLGH D   +L P    RL       V   F           + 
Sbjct: 20  GGKRTSLQGWGEF--GRLGHGDTLSQLEPK---RLRFDKRFPVSLSFTALAHESLNGAIY 74

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            +CG   TV +T  G+V + G    GQLG+  A D+++  V   L    V G++ G YH 
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           AV+T  G V  WGK  +GQLG GD      P  V  L + ++  + CG + T A+ ++  
Sbjct: 135 AVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGE 194

Query: 609 I 609
           I
Sbjct: 195 I 195


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 164/317 (51%), Gaps = 15/317 (4%)

Query: 270 GAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
           GA+++ AL     EV+ WG G  GRLGH    DV  P+ +  L+G N+  V+CG+  T A
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLA 133

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +T +GE++++G N +G   +G   +    LP+ + ++L G  V+ +ACG  H+   +++G
Sbjct: 134 VTDTGELFSFGRNQNGQ--LGLGTTSDAILPQPV-ESLRGQEVTSIACGGEHSLAATSAG 190

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            +F +G G +G LG G  ++   P +V  L G+KV SVACG  H+ A  +          
Sbjct: 191 DVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADET--------- 241

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G ++T+G +  G+LGH D   +L+P  V  L D   V  + G   T      GK+Y+ 
Sbjct: 242 --GAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSW 299

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQLG     D +  V    L    VK +S G  H   +T  G V++WG+  NGQL
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQL 359

Query: 569 GLGDSQERETPTFVEAL 585
           G  + ++   P  +  L
Sbjct: 360 GHNEPKDTNAPVRLAEL 376



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 165/343 (48%), Gaps = 15/343 (4%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L V ++S G+ H+  +   G    WG G+DG+LGH    +   P+ +  L   +  +V  
Sbjct: 14  LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCS 73

Query: 322 GEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           G   + AL++   E+Y+WG  + G   +G       ++P+ +   L G  + KVACG+ H
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGDFGR--LGHGDCNDVFIPQPI-RALAGRNIVKVACGDTH 130

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           T  V+ +G+LF++G    G LG G   +   P+ VESLRG +V S+ACG  H+ A     
Sbjct: 131 TLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSA- 189

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                     G +F WG    G LG    E + LP+ V  L        +CG   ++   
Sbjct: 190 ----------GDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAAD 239

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G VYT G + +GQLG+    D+ +      LK+  +  I+ G  H +     G +Y+W
Sbjct: 240 ETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSW 299

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G N  GQLG+G + +   P  V+ L    V+ + CG   T A+
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAV 342



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 144/291 (49%), Gaps = 14/291 (4%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+ + +    ++  ++ G  H   VT  GE+F +G  ++G+LG     D   P+ V
Sbjct: 106 DVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPV 165

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           E L G  V S++CG   + A T +G+++ WG   +G   VG    R   LP ++   L+G
Sbjct: 166 ESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRH--LPSQVHG-LEG 222

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           V+V+ VACG  H+     +G ++T+G   +G LGHG+  +   PK VESL+  ++  +A 
Sbjct: 223 VKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAG 282

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HT+A  D            GKL++WG    G+LG         P  V  L       
Sbjct: 283 GWRHTSAADD-----------SGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKL 331

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            SCG   T  +T  G V++ G  V+GQLG+ + KD +  V   +L    +K
Sbjct: 332 LSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIK 382



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 14/221 (6%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T  DA+LP+ +ES    +V +I+ G +H+   T  G+VF WG G+ G LG     D   P
Sbjct: 155 TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLP 214

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
             V  L G+ V SV+CG   + A  ++G +YT+G + +G   +G        +P K  ++
Sbjct: 215 SQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ--LGHGDCIDQLVP-KAVES 271

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           L   R+  +A G  HT+    SG+L+++G   FG LG G+  + + P  V+ L    VK 
Sbjct: 272 LKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKL 331

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
           ++CG  HT A+ +            G +F+WG    G+LGH
Sbjct: 332 LSCGWRHTFAVTEA-----------GDVFSWGRGVNGQLGH 361



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 13/199 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV  WG G  G    G  +          D  LP  +     + V +++ G +H+    +
Sbjct: 191 DVFAWGWGRYGNLGVGPPE----------DRHLPSQVHGLEGVKVTSVACGWRHSIAADE 240

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G V+ +G  K G+LGH   +D   PK VE L    +  ++ G   T A   SG++Y+WG
Sbjct: 241 TGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWG 300

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   +G     +  +P +  +T     V  ++CG  HT  V+ +G +F++G G  G
Sbjct: 301 WNKFGQLGIGSNTDSNAPVPVQGLNT---SPVKLLSCGWRHTFAVTEAGDVFSWGRGVNG 357

Query: 400 VLGHGNLQNVSQPKEVESL 418
            LGH   ++ + P  +  L
Sbjct: 358 QLGHNEPKDTNAPVRLAEL 376


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 171/364 (46%), Gaps = 34/364 (9%)

Query: 250  ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
             L+P+L +S    + + +  G     ++   G V   GEG  GRLG   + D +    + 
Sbjct: 770  VLVPQLTKS--FHEARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHIS 827

Query: 310  CLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
             L G  V+ ++     +    ALT++GE+++WG  ++G   +G   S     PR++ + L
Sbjct: 828  ALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EAL 884

Query: 367  DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             G  V +VACG  H+A+V+  G+LFT+G G +G LGHG+  N   P+ V +L    +  V
Sbjct: 885  RGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQV 944

Query: 427  ACGPWHTAAIVDIMVDRCKSNAIGGKLFTW--GDADKGRLGHVDGERKLLPTCVTRLVDF 484
            ACG  HT  +                L  W  GD D G+LG      K  PT +  L   
Sbjct: 945  ACGLNHTVIVSQ------------DNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRV 992

Query: 485  DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN------PKAKDRSITVVEGKLKEEFV 538
               + SCG   T  LT  GK++  G       GN      P    + +T     L    +
Sbjct: 993  GIKKISCGAQFTAALTWDGKLFMFGQ--DRMCGNCETRTSPSFNPQVVTA----LSSHHI 1046

Query: 539  KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
              IS G+ H   LTS G VYTWG N +GQLGLG +   + PT VE+L  + +  +  G +
Sbjct: 1047 IDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRT 1106

Query: 599  ITAA 602
             +AA
Sbjct: 1107 HSAA 1110



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 16/253 (6%)

Query: 373  KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW- 431
            KV CG+  T I++ +G + + G+G++G LG GN  + ++   + +L+G  VK +A     
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 432  --HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
              H  A+ +            G++F+WGD D G+LGH + +R+  P  +  L   + VQ 
Sbjct: 844  DGHAIALTE-----------NGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQV 892

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
            +CG   +  +T  GK++T G   +G+LG+    ++ I      L+   +  ++ G  H  
Sbjct: 893  ACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTV 952

Query: 550  VLTSGG-SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH-K 607
            +++    +V+  G    G+LG+G +  + +PT +E L    ++ + CG+  TAA+    K
Sbjct: 953  IVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGK 1012

Query: 608  SISVGDQSSCSQC 620
                G    C  C
Sbjct: 1013 LFMFGQDRMCGNC 1025



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 22/214 (10%)

Query: 398 FGVLGHGNLQNVSQ----PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           FG   HG L  V      P+  +S    + + V CG   T  I +            G +
Sbjct: 755 FGAGRHGQLAEVGSGVLVPQLTKSFH--EARKVVCGQNCTFIINN-----------NGVV 801

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDF---DFVQASCGRMLTVGLTGLGKVYTMGS 510
            + G+   GRLG  + +     T ++ L  F       ++      + LT  G+V++ G 
Sbjct: 802 LSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGD 861

Query: 511 AVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +G+LG+  + + R    +E    +E V+ ++ G  H AV+T  G ++T+G    G+LG
Sbjct: 862 GDYGKLGHGNSDRQRRPRQIEALRGQEVVQ-VACGFKHSAVVTIDGKLFTFGYGDYGRLG 920

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G +  ++ P  V AL +  +  V CG + T  +
Sbjct: 921 HGSTTNKKIPERVMALENYIIGQVACGLNHTVIV 954


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 181/380 (47%), Gaps = 33/380 (8%)

Query: 211 LIERKDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNI 267
           + E  D+   V+ WG    G LG  +GG  + +V+         LP+ + S   ++V +I
Sbjct: 1   MTETADLKSSVLCWGSLTHGQLG--LGGLEEETVT---------LPREIRSFCNVEVVHI 49

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC--PKLVECLSGINVQSVSCGEFQ 325
           + G +H   V K+G V   G    G+LGH    +  C  P L++ L   NV   S G   
Sbjct: 50  ACGLQHTLFVKKDGRVLSCGNNDYGQLGH----EKPCKRPALIDSLGERNVLQASSGTKH 105

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           +  LT +G+++TWG N       G+  S S  +PR +    D  +V +VACG  HT  ++
Sbjct: 106 STVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADH-KVVQVACGSAHTVGLT 164

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            +GQ++T+G    G LG  N    ++P+ V  + GL +  VA G  H   +         
Sbjct: 165 ATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVL--------- 215

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
              I G LF WG    G+LG  D + +  PT V  L +      +CG   ++ LT  G V
Sbjct: 216 --TISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGV 273

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNA 564
           +T G+ ++GQLG+  + +  +     +L    V  I+ G  H +A + S G VY +G   
Sbjct: 274 FTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGG 333

Query: 565 NGQLGLGDSQERETPTFVEA 584
           NGQLG G +  R +P  V+ 
Sbjct: 334 NGQLGTGSTVNRMSPAMVKG 353



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 140/275 (50%), Gaps = 24/275 (8%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +  WG   HG   +G     +  LPR++  +   V V  +ACG  HT  V   G++ + G
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREI-RSFCNVEVVHIACGLQHTLFVKKDGRVLSCG 69

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +  +G LGH   +   +P  ++SL    V   + G  H+  + D            G++F
Sbjct: 70  NNDYGQLGHE--KPCKRPALIDSLGERNVLQASSGTKHSTVLTD-----------AGQVF 116

Query: 455 TWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           TWG  +  +LG   VD     +P  V  L D   VQ +CG   TVGLT  G++YT GS  
Sbjct: 117 TWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNN 176

Query: 513 HGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           HGQLG     P+ + + ++ + G      +  +++G+ H  VLT  G+++ WG N+ GQL
Sbjct: 177 HGQLGLANKTPQNEPQWVSCISGLP----IVRVAAGADHNLVLTISGALFAWGCNSFGQL 232

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+GD Q+R  PT V+ LR++ + ++ CG   + A+
Sbjct: 233 GVGDDQDRGAPTLVKTLRNQGICALACGDDHSLAL 267



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 26/321 (8%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           V CWG    G+LG        V+ P+ +     + V  ++CG   T  + K G + + G+
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70

Query: 341 NNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N++G           H  P K   L D+L    V + + G  H+ +++ +GQ+FT+G   
Sbjct: 71  NDYG--------QLGHEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNE 122

Query: 398 FGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              LG G + + S   P+ V  L   KV  VACG  HT  +              G+++T
Sbjct: 123 DNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTAT-----------GQIYT 171

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG  + G+LG  +   +  P  V+ +     V+ + G    + LT  G ++  G    GQ
Sbjct: 172 WGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQ 231

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG    +DR    +   L+ + +  ++ G  H   LT  G V+T+G    GQLG   S  
Sbjct: 232 LGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNN 291

Query: 576 RETPTFVEALRDRQVESVVCG 596
              P  V  L    V  + CG
Sbjct: 292 ELLPRKVFELMGSSVTQIACG 312


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 17/342 (4%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG-- 322
            + I  G     ++  +G V   GEG  GRLG   + D+   + +  L G  V  ++    
Sbjct: 3440 KQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTG 3499

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             E  + ALT++GE+++WG  ++G   +G   S     PR++ + L G  V  VACG  H+
Sbjct: 3500 LEGHSLALTETGEVFSWGDGDYGK--LGHGNSERQRRPRQI-EALRGEDVLHVACGHKHS 3556

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            AIV+  G+LFT+G    G LG GN  N   P +V +L+ + V+ +ACG  HT  +     
Sbjct: 3557 AIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVT---T 3613

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
            DR         ++T+G+ + G+LG      K+ P  V      +  +  CG   T+ LT 
Sbjct: 3614 DR-------ESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTK 3666

Query: 502  LGKVYTMG-SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             GKVY+ G +  +G                  L E+F++ I++G  H   LT  G V++W
Sbjct: 3667 EGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSW 3726

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G + +GQLGLG +  +  P  + +L+ + +  +  G + +AA
Sbjct: 3727 GNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAA 3768



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 151/324 (46%), Gaps = 29/324 (8%)

Query: 288 EGKDGRLGHKVNMDVSCPKLV----ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           +G  GRLG   + + + PKL+    EC    N+ S    +  T A+   G IY+WG  ++
Sbjct: 440 QGNYGRLGLGDSSNQNRPKLIRFEHECKIK-NLVSSKGSDGHTLAIASDGRIYSWGDGDY 498

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G     +   P+ +   + G  V ++A G  H+A +++ G L+T+GDG +G LGH
Sbjct: 499 GK--LGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGH 556

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           G+  + S P  V+ + G  V SV+CG   T  I          +     ++++G  D G+
Sbjct: 557 GDNHSRSIPTLVKDITG--VGSVSCGSSFTVVI----------SQDATTVWSFGAGDNGK 604

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           LGH D  R   P  ++ L      +  C    ++ LT +G+V+  GS      G   A  
Sbjct: 605 LGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADA-- 662

Query: 524 RSITVVEGKLKEEF----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE-T 578
              T +  K  +EF    +  I+ G  H   LT    VY+WG NA+GQ GLG++      
Sbjct: 663 ---TFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLL 719

Query: 579 PTFVEALRDRQVESVVCGSSITAA 602
           P  V    +  +  +  G+S + A
Sbjct: 720 PRKVTGFDNHVIYQISVGTSHSIA 743



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 137/274 (50%), Gaps = 21/274 (7%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            E YTWG   HG      + + S  L  +   T    +  ++ CG   T ++   G +   
Sbjct: 3408 EAYTWGGGRHG------QLAESGRLVLQPTLTSSFSKAKQIHCGHNSTFVIEHDGTVLAC 3461

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW---HTAAIVDIMVDRCKSNAIG 450
            G+G++G LG GN  ++ + + + +L+G  V  +A       H+ A+ +            
Sbjct: 3462 GEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTET----------- 3510

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G++F+WGD D G+LGH + ER+  P  +  L   D +  +CG   +  +T  GK++T G+
Sbjct: 3511 GEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGA 3570

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG-GSVYTWGKNANGQLG 569
            +  G+LG     ++ +      L+   V+ I+ G+ H  V+T+   SV+T+G+   GQLG
Sbjct: 3571 SDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLG 3630

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            LG +  + TP +V+A     ++ + CG+  T A+
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLAL 3664



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 28/288 (9%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTK 331
           H   +  +G ++ WG+G  G+LGH  ++    PKL+   + G  V+ ++ G   + A+T 
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG-QL 390
            G +YTWG  ++G    G+  SRS  +P  + D      V  V+CG   T ++S     +
Sbjct: 540 EGLLYTWGDGDYGRLGHGDNHSRS--IPTLVKDI---TGVGSVSCGSSFTVVISQDATTV 594

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +++G G  G LGHG+   V +PK + +L+GL ++ V C    + A+  I           
Sbjct: 595 WSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSI----------- 643

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G++F WG       G  D    L+P  +    D   +  + G    + LT    VY+ G+
Sbjct: 644 GQVFVWGSGPCLGYGQADATF-LVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGN 702

Query: 511 AVHGQ--LGN---PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
              GQ  LGN   P    R +T  +  +    +  IS G+ H    T+
Sbjct: 703 NASGQCGLGNNNSPVLLPRKVTGFDNHV----IYQISVGTSHSIAWTA 746



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 16/243 (6%)

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVD 438
           HT  +++ G+++++GDG +G LGHGN      PK +   ++G  V+ +A G  H+AAI  
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                       G L+TWGD D GRLGH D   + +PT V  +     V  SCG   TV 
Sbjct: 540 -----------EGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITGVGSV--SCGSSFTVV 586

Query: 499 LT-GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           ++     V++ G+  +G+LG+          V   L+   ++ +   S     LTS G V
Sbjct: 587 ISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQV 646

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
           + WG       G  D+     P  ++  +D Q+  +  G +   A+     +     ++ 
Sbjct: 647 FVWGSGPCLGYGQADATFL-VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNAS 705

Query: 618 SQC 620
            QC
Sbjct: 706 GQC 708



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 21/242 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ I++G +H+A +T EG ++ WG+G  GRLGH  N   S P LV+ ++G  V SVSCG 
Sbjct: 524 VRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITG--VGSVSCGS 581

Query: 324 FQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
             T  +++    ++++G  ++G   +G   +   + P K+   L G+ + KV C    + 
Sbjct: 582 SFTVVISQDATTVWSFGAGDNGK--LGHGDTSRVYRP-KVISNLQGLLIRKVCCASQSSL 638

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            +++ GQ+F +G G    LG+G        PK ++  + L++  +A G  H  A+     
Sbjct: 639 ALTSIGQVFVWGSGP--CLGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALT---- 692

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERK-LLPTCVTRLVDFDFVQASCGRMLTVGLT 500
             C ++     +++WG+   G+ G  +     LLP  VT   +    Q S G   ++  T
Sbjct: 693 --CDND-----VYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIAWT 745

Query: 501 GL 502
            L
Sbjct: 746 AL 747



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 25/227 (11%)

Query: 384  VSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S   + +T+G G  G L   G L  V QP    S    K K + CG  H +  V I  D
Sbjct: 3403 MSAKCEAYTWGGGRHGQLAESGRL--VLQPTLTSSFS--KAKQIHCG--HNSTFV-IEHD 3455

Query: 443  RCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRML---TV 497
                    G +   G+   GRLG  + D   +L P  +T L  F   + +    L   ++
Sbjct: 3456 --------GTVLACGEGSYGRLGQGNSDDLPRLRP--ITALQGFVVTELATSTGLEGHSL 3505

Query: 498  GLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
             LT  G+V++ G   +G+LG+  + + R    +E  L+ E V  ++ G  H A++T  G 
Sbjct: 3506 ALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEA-LRGEDVLHVACGHKHSAIVTVDGK 3564

Query: 557  VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            ++T+G +  G+LGLG++  ++ P  V AL+   VE + CG++ T  +
Sbjct: 3565 LFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVV 3611



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            +++I+ G +HA  +TKEG+V+ WG   DG+LG    +    P L+  L G  ++ +S G 
Sbjct: 3704 IEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGH 3763

Query: 324  FQTCALT 330
              + A T
Sbjct: 3764 NHSAAWT 3770


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 179/347 (51%), Gaps = 19/347 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H+  +     V  WG G+DG+LGH    D   P  +  L G+++ S++CG   T
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82

Query: 327 CALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            + ++S  E+Y+WG  + G   +G   S   + P+ +   L  +++ ++ACG+ H   V+
Sbjct: 83  TSYSESRMEVYSWGWGDFGR--LGHGNSSDLFTPQPI-KALHSLKIRQIACGDSHCLAVT 139

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G++ ++G    G LG G  ++   P+++++ +G+ +K VA G  HTAA+ +       
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE------- 192

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G+L+ WG    G LG  D   +L+P  V+ +     +  +CG   T+ ++  G +
Sbjct: 193 ----DGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGL 248

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           YT G + +GQLG+   +D         L++ ++  IS G  H   LTS G++Y WG N  
Sbjct: 249 YTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKF 308

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVV---CGSSITAAICLHKSI 609
           GQ+G+GD+ +  +P  V+     Q  S+V   CG   T AI   +++
Sbjct: 309 GQVGVGDNIDHCSPVQVK-FPHEQAHSLVQISCGWRHTLAITERQNV 354



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 174/352 (49%), Gaps = 20/352 (5%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE-GEVFCWGEGKDGRLGH 296
           DG +     + D   P  L +   LD+ +I+ GA H    ++   EV+ WG G  GRLGH
Sbjct: 47  DGQLGHGDAE-DRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGH 105

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P+ ++ L  + ++ ++CG+    A+T  GE+ +WG N +G   +G   +   
Sbjct: 106 GNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQ--LGLGTTEDS 163

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+     GV +  VA G  HTA V+  G+L+ +G G +G LG G+  +   P++V 
Sbjct: 164 LVPQKI-QAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVS 222

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            + G K+  VACG  HT ++           +  G L+T+G +  G+LGH D E  L P 
Sbjct: 223 LVNGDKMIMVACGWRHTISV-----------SSSGGLYTYGWSKYGQLGHGDFEDHLTPH 271

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L D      S G   T+ LT  G +Y  G    GQ+G     D   + V+ K   E
Sbjct: 272 KVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDH-CSPVQVKFPHE 330

Query: 537 FVKG---ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
                  IS G  H   +T   +V++WG+  NGQLG G+S +R  P  +E L
Sbjct: 331 QAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVL 382



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++   P ++ +L GL + S+ CG
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCG 78

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT +  +  ++          +++WG  D GRLGH +      P  +  L      Q 
Sbjct: 79  ADHTTSYSESRME----------VYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQI 128

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 129 ACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTA 188

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD  +R  P  V  +   ++  V CG   T ++
Sbjct: 189 AVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISV 242



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 30/46 (65%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           IS G +H   +T+   VF WG G +G+LGH  +MD + PK++E LS
Sbjct: 338 ISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLS 383


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 163/325 (50%), Gaps = 31/325 (9%)

Query: 305 PKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           P L+E +  + ++  +VS G     AL+  G +Y+WG  + G   +G     S+  P KL
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGK--LGHGNKVSYDRP-KL 59

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
            + L GV +  +ACG  H+A ++++G L+T+G G +G LGHG+  +  +PK VE+L+  K
Sbjct: 60  IEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  VACG      +       C ++     +++WGD D G+LG    +   +P  +  L 
Sbjct: 120 VIDVACGSGDAQTL-------CVTD--DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLA 170

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFV 538
               V+  CG   +V LT  G VYT G   + +LG+       + R +  ++GK     +
Sbjct: 171 GLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK----I 226

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             I++GS H    +  G V+TWG N  GQLG G +     P  V AL+ +++  V CGS+
Sbjct: 227 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSA 286

Query: 599 ITAAICLHKSISVGDQSSCSQCRMP 623
            T A    K+         +Q RMP
Sbjct: 287 HTLAWSTAKA---------TQSRMP 302



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 134/272 (49%), Gaps = 18/272 (6%)

Query: 251 LLPKLLESA--VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           ++P LLES   V +    +S G KH   ++ EG V+ WGEG DG+LGH   +    PKL+
Sbjct: 1   MIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLI 60

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           E L G+ +  ++CG   + A+T +G +YTWG   +G   +G   S     P K+ + L  
Sbjct: 61  EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR--LGHGDSDDQLRP-KVVEALQD 117

Query: 369 VRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
            +V  VAC  G+  T  V+    ++++GDG +G LG G       P +++SL GL V  V
Sbjct: 118 YKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKV 177

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            CG   + A+              G ++TWG  D  RLGH   +    P  V  L     
Sbjct: 178 ECGSQFSVALTR-----------SGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 226

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           +  + G +  V  +  G+V+T G    GQLG+
Sbjct: 227 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGD 258



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 119/275 (43%), Gaps = 79/275 (28%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQ-NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           V  WGEG          DG +   NK   D   PKL+E  + +++ +I+ G  H+A +T 
Sbjct: 35  VYSWGEGD---------DGKLGHGNKVSYDR--PKLIEDLLGVEIVDIACGGHHSAAITS 83

Query: 280 EGEVFCWGEGKDGRLGHKVN-----------------MDVSC------------------ 304
            G ++ WG+G+ GRLGH  +                 +DV+C                  
Sbjct: 84  AGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWS 143

Query: 305 -------------------PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN--- 342
                              P  ++ L+G+ V  V CG   + ALT+SG +YTWG  +   
Sbjct: 144 WGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHR 203

Query: 343 --HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             HG D    R       PRK+   L G ++  +A G  H    S  G++FT+GD   G 
Sbjct: 204 LGHGTDDHVRR-------PRKV-AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 255

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           LG G    + +P+ V +L+G K+  VACG  HT A
Sbjct: 256 LGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 290


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 176/388 (45%), Gaps = 63/388 (16%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGKDGRLGH--KVNMDVSCPKLVECLSGIN-VQSVSCGE 323
            +S G  H A++T +GE++ WG  + G+LGH  +VN  +S PK V+   G + +  V CG 
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGG 1186

Query: 324  FQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
              T A+  +  +Y+WG +      HG   V + R        K+ + L G ++  +A G 
Sbjct: 1187 EHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRP-------KVIEELTGQKIQAIAAGF 1239

Query: 379  WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES---LRGL------KVKSVACG 429
             H  ++  SG+LF++G G FG LG G+  + + P  +E    + GL      K+  +ACG
Sbjct: 1240 AHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACG 1299

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
              H+          C  N   G++++WG   +G+LGH   E    P  +  L      + 
Sbjct: 1300 FGHSVI--------CSEN---GEVYSWGLGKQGQLGHKVFENISKPRLIETLRGV--TKI 1346

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
            SCG   TV  T L  VY+ GS  H +LG+   KD S+  V     ++ V  +  G  H  
Sbjct: 1347 SCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTM 1406

Query: 550  VLT---------------------SGGSVYTWGKNANGQLGLGDSQ-----ERETPTFVE 583
             +T                     S   +Y WG   +G+LGLG        ++  PT ++
Sbjct: 1407 TITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIK 1466

Query: 584  ALRDRQVESVVCGSSITAAICLHKSISV 611
             +    +  + CGS  +A I  + +I V
Sbjct: 1467 GVNSLNLIDISCGSDFSAMITSNNAIYV 1494



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 170/357 (47%), Gaps = 72/357 (20%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCA 328
            G +H   V     V+ WG  K G+LGH    ++ S PK++E L+G  +Q+++ G      
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 329  LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--------FDTLDGVRVSKVACGEWH 380
            L KSGE++++G+ + G    G   S++  +P ++            DG +++++ACG  H
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKN--IPTRIEINAIMGGLQHHDGGKITQIACGFGH 1302

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            + I S +G+++++G G  G LGH   +N+S+P+ +E+LRG  V  ++CG +HT A  D+ 
Sbjct: 1303 SVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG--VTKISCGHFHTVATTDL- 1359

Query: 441  VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                        +++WG  +  +LGH   + + +P  V   +  +  +  CG+  T+ +T
Sbjct: 1360 ----------KNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTIT 1409

Query: 501  ---------------------GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-- 537
                                     +Y  GSA HG+LG           + G LK  F  
Sbjct: 1410 FPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLG-----------LGGDLKSPFFD 1458

Query: 538  ------VKGISS--------GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
                  +KG++S        GS   A++TS  ++Y WG    GQ+G G + +   PT
Sbjct: 1459 KPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPT 1515



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 148/319 (46%), Gaps = 33/319 (10%)

Query: 319  VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACG 377
            VSCG      +T  GE+YTWG N  G    G   +++  LP+++ D   G   +  V CG
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRV-DFFRGKSPIFMVECG 1185

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
              HT  V ++  ++++G   FG LGHG    N S+PK +E L G K++++A G  H    
Sbjct: 1186 GEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAH---- 1241

Query: 437  VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT------CVTRLVDFD---FV 487
             +I++ +       G+LF++G  D G+LG      K +PT       +  L   D     
Sbjct: 1242 -NIVLKKS------GELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKIT 1294

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK----AKDRSITVVEGKLKEEFVKGISS 543
            Q +CG   +V  +  G+VY+ G    GQLG+      +K R I  + G      V  IS 
Sbjct: 1295 QIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG------VTKISC 1348

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G +H    T   +VY+WG   + +LG    ++   P  V+    + V  VVCG + T  I
Sbjct: 1349 GHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTI 1408

Query: 604  CLHKSISVGDQSSCSQCRM 622
                 ++  +Q    +  M
Sbjct: 1409 TFPDDLNNSNQDDEDEENM 1427



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 37/220 (16%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG G   G +G  V  ++S+         P+L+E+  +  V  IS G  H    T 
Sbjct: 1311 EVYSWGLGK-QGQLGHKVFENISK---------PRLIET--LRGVTKISCGHFHTVATTD 1358

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT--------- 330
               V+ WG G+  +LGH  + D S PK+V+     NV  V CG+  T  +T         
Sbjct: 1359 LKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSN 1418

Query: 331  ------------KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR---VSKVA 375
                         S  IY WG   HG   +G    +S +  + +   + GV    +  ++
Sbjct: 1419 QDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDL-KSPFFDKPIPTAIKGVNSLNLIDIS 1477

Query: 376  CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            CG   +A+++++  ++ +G G FG +G+G   +V  P  +
Sbjct: 1478 CGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 171/333 (51%), Gaps = 30/333 (9%)

Query: 220 DVMIWGEG-VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           DV +WG G V    +    +GS+       D LLP  +ES  + +V  +S+G  H+A + 
Sbjct: 644 DVYMWGRGSVKNPPLSTLGNGSLE------DQLLPTKVES--LSEVVLVSIGYYHSAALK 695

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             GE+  WG G+DG+LGH   ++ + PK+V+ ++   V  V CGE  T  LTK+G+++TW
Sbjct: 696 SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTW 755

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G + +G   +G+ +     +   L  +L+   + ++ACG  H A+++ + ++  +G+G  
Sbjct: 756 GTSEYGQLGLGDTQKNCTPM---LVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG-- 810

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             +G  N+  +S P  V +L+ L ++ ++CG + TAA+ +     C      G ++TWG 
Sbjct: 811 AAMGSANI--ISVPMMVPALKHLNIERLSCGHYSTAALTE-----C------GDVYTWGS 857

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             +  LGH   + +L P  V  L      Q SCG      LT  GK+YT G    GQLG+
Sbjct: 858 GQE--LGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGH 915

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            +        ++  LK  F+  +S G  H A L
Sbjct: 916 AQGDQNKPKKIDSLLKTTFI-SVSCGENHNASL 947



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 168/348 (48%), Gaps = 26/348 (7%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           LL S+  L   N +  ++ A  +  +  +  WG   + +LG K           E L   
Sbjct: 562 LLSSSPQLTGVNSNDSSRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNF 621

Query: 315 NVQ---SVSCGEFQTCALTKSGEIYTWGH---NNHGADLVGERRSRSHWLPRKLFDTLDG 368
           N+    S+SCG + + ALT++G++Y WG     N     +G        LP K+ ++L  
Sbjct: 622 NIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKV-ESLSE 680

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           V +  V+ G +H+A + ++G+L T+G G  G LGHG++ N + PK V+++    V  V C
Sbjct: 681 VVL--VSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQC 738

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HT  +              GK+FTWG ++ G+LG  D ++   P  VT L  ++ +Q
Sbjct: 739 GEKHTICLTK-----------NGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQ 787

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            +CG      LT   +V   G+     +G+  A   S+ ++   LK   ++ +S G Y  
Sbjct: 788 IACGSTHCAVLTNAREVLVFGNG--AAMGS--ANIISVPMMVPALKHLNIERLSCGHYST 843

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           A LT  G VYTWG  +  +LG G +Q    P  V+ LR + +  + CG
Sbjct: 844 AALTECGDVYTWG--SGQELGHGTNQSELHPKLVDGLRSQSIRQISCG 889



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 145/300 (48%), Gaps = 27/300 (9%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHN-NHGADLVGERRSRSHWLPRKLFDTLDGV 369
           L+G+N    S    Q   L     I TWG + N       E R +S   P +L    +  
Sbjct: 569 LTGVNSNDSSRSATQ---LDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERL-PNFNIP 624

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGT-----FGVLGHGNLQNVSQPKEVESLRGLKVK 424
            +  ++CG +++A ++ +G ++ +G G+        LG+G+L++   P +VESL   +V 
Sbjct: 625 EICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLS--EVV 682

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            V+ G +H+AA+        KSN   G+L TWG  + G+LGH D   + +P  V  +   
Sbjct: 683 LVSIGYYHSAAL--------KSN---GELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSH 731

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              Q  CG   T+ LT  GKV+T G++ +GQLG    +     ++   L++  +  I+ G
Sbjct: 732 WVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACG 791

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S H AVLT+   V  +G  A     +G +     P  V AL+   +E + CG   TAA+ 
Sbjct: 792 STHCAVLTNAREVLVFGNGA----AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALT 847



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 105/186 (56%), Gaps = 10/186 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+ S    ++  I+ G+ H A++T   EV  +G G    +G   N+ +S P +V  L 
Sbjct: 774 PMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG--AAMG-SANI-ISVPMMVPALK 829

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            +N++ +SCG + T ALT+ G++YTWG    G +L G   ++S   P KL D L    + 
Sbjct: 830 HLNIERLSCGHYSTAALTECGDVYTWGS---GQEL-GHGTNQSELHP-KLVDGLRSQSIR 884

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++CG  H A ++ SG+++T G   FG LGH    + ++PK+++SL      SV+CG  H
Sbjct: 885 QISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQ-GDQNKPKKIDSLLKTTFISVSCGENH 943

Query: 433 TAAIVD 438
            A++ D
Sbjct: 944 NASLFD 949



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 29/273 (10%)

Query: 390 LFTYGDGT---FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           + T+G  +    G    G  Q+ + P+ + +    ++ S++CG +++AA+ +        
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTE-------- 641

Query: 447 NAIGGKLFTWG-----DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G ++ WG     +     LG+   E +LLPT V  L +   V  S G   +  L  
Sbjct: 642 ---NGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEV--VLVSIGYYHSAALKS 696

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G++ T G    GQLG+    +++I  V   +   +V  +  G  H   LT  G V+TWG
Sbjct: 697 NGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWG 756

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV----GDQSSC 617
            +  GQLGLGD+Q+  TP  V +L    +  + CGS+  A +   + + V        S 
Sbjct: 757 TSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAAMGSA 816

Query: 618 SQCRMPFGFRRKKH---NCYNCGLHFCSACSTK 647
           +   +P      KH      +CG H+ +A  T+
Sbjct: 817 NIISVPMMVPALKHLNIERLSCG-HYSTAALTE 848


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 169/354 (47%), Gaps = 28/354 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  +S G+ H+  +   G V  WG G+DG+LGH      + P  +  L+   V +V CG 
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 324 FQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
             T A+  S G+IY+WG  + G   +G       ++PR +     G  V++VACG+ HT 
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFG--RLGHGECGDVFVPRPI-AFFSGRPVARVACGDTHTL 128

Query: 383 IVSTS-GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           +V+   G L+T+G    G LG G+  +   P+ V +L+G +V SVACG  H+ A  +   
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEA-- 186

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    G +F+WG    G LG  D + +  PT V  L         CG   +  +T 
Sbjct: 187 ---------GTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTD 237

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+V+T G + +GQLG+    D +   +   L+   V  ++ G  H     S G++Y WG
Sbjct: 238 EGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWG 297

Query: 562 KNANGQLGLGDSQERETPTFVEALRD------------RQVESVVCGSSITAAI 603
            N  GQLGLGDS++R  PT V                 R+V  + CG   T A+
Sbjct: 298 WNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAV 351



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 157/337 (46%), Gaps = 28/337 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKH-AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           P  + +     V  +  GA++  A+ +  G+++ WG G  GRLGH    DV  P+ +   
Sbjct: 53  PTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFF 112

Query: 312 SGINVQSVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           SG  V  V+CG+  T  +T+  G +YT+G N +G   +G        L  +L   L G R
Sbjct: 113 SGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDC---LSPQLVTALQGER 169

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           VS VACG  H+   + +G +F++G G +G LG G+ Q+   P  V  L G+ V SV CG 
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGW 229

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            H+A + D            G++FT+G +  G+LGH D      P  V  L        +
Sbjct: 230 RHSAVVTDE-----------GRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVA 278

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEG-----------KLKEEFV 538
            G   T+     G +Y  G    GQLG   ++DR+  T V G                 V
Sbjct: 279 GGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRV 338

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
             ++ G  H   +T  G VY+WG+  NGQLG G  Q+
Sbjct: 339 ALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 112/235 (47%), Gaps = 11/235 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  V+CG  H+  +   G + ++G G  G LGHG     + P  + +L    V +V CG
Sbjct: 11  RVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCG 70

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             +T A+              G++++WG  D GRLGH +     +P  +         + 
Sbjct: 71  AEYTVAVASSR----------GQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARV 120

Query: 490 SCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
           +CG   T+ +T G G +YT G   +GQLG     D     +   L+ E V  ++ GS H 
Sbjct: 121 ACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHS 180

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              T  G+V++WG    G LG GDSQ+R TPT V  L    V SVVCG   +A +
Sbjct: 181 LAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVV 235



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 26/230 (11%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D L P+L+ +     V +++ G++H+   T+ G VF WG G+ G LG   + D   P  V
Sbjct: 155 DCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRV 214

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L G+ V SV CG   +  +T  G ++T+G + +G   +G      H  P  L   L  
Sbjct: 215 VGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQ--LGHGDHVDHTRP-CLVAGLQH 271

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL------- 421
            RVS VA G  HT    + G L+ +G   FG LG G+ ++ + P  V             
Sbjct: 272 CRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAG 331

Query: 422 -----KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
                +V  +ACG  HT A+ +            G++++WG    G+LGH
Sbjct: 332 AATPRRVALLACGWRHTVAVTEA-----------GEVYSWGRGVNGQLGH 370



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 10/180 (5%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G++    +Q D   P  +     + V ++  G +H+A+VT EG VF +G  K G+LGH  
Sbjct: 198 GNLGDGDSQ-DRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGD 256

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           ++D + P LV  L    V +V+ G   T A    G +Y WG N  G   +G+   R+   
Sbjct: 257 HVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPT 316

Query: 359 PRKLFDTLDGV---------RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
           P   F    G          RV+ +ACG  HT  V+ +G+++++G G  G LGHG  Q++
Sbjct: 317 PVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           +E  V G+S GS H   L   G V +WG+  +GQLG G + +  +PT + AL D  V++V
Sbjct: 8   EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67

Query: 594 VCGSSITAAI 603
           VCG+  T A+
Sbjct: 68  VCGAEYTVAV 77


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 265  QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG-- 322
            Q I  G     +V   G V   GEG  GRLG   + D+     +  + G  V  ++    
Sbjct: 1834 QQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 323  -EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             +  T A+T+SGE+++WG  ++G   +G   S     PR++ + L G  V +++CG  H+
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVIQLSCGFKHS 1950

Query: 382  AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            A+V+  G+LFT+G+G +G LG G   N   P  V +L   ++  VACG  HT  +     
Sbjct: 1951 AVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCV----- 2005

Query: 442  DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +A G  ++ +GD D G+LG  +   K LPT +  L      + +CG   +V L+ 
Sbjct: 2006 -----SADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSK 2060

Query: 502  LGKVYTMGSAVHGQLGNPKAKDRSITVVE--GKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             GKV+T G      +G P  +  S    +    L   F++ +  G+ H  VLTS G V+ 
Sbjct: 2061 YGKVFTWGQ--ERLIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWG 2118

Query: 560  WGKNANGQLGLG--DSQERETPTFVEALRDRQVESV 593
            WG N+ GQLGLG  +S  RE P  V  L  + +  V
Sbjct: 2119 WGSNSEGQLGLGHTNSPVRE-PQLVPCLTGKNIRQV 2153



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 135/280 (48%), Gaps = 33/280 (11%)

Query: 334  EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV------SKVACGEWHTAIVSTS 387
            E + WG   +G    G    R  ++P         VRV       ++ CG+  T +V  +
Sbjct: 1802 EAFLWGSGRNGQMCEG---GRGAFVP---------VRVPSFSCSQQIVCGQNCTFVVQNN 1849

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG---PWHTAAIVDIMVDRC 444
            G +   G+G++G LG GN  ++     + S++G  V  +A       HT A+ +      
Sbjct: 1850 GTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTE------ 1903

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                  G++F+WGD D G+LGH + +R+  P  +  L   + +Q SCG   +  +T  GK
Sbjct: 1904 -----SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGK 1958

Query: 505  VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS-VYTWGKN 563
            ++T G+  +G+LG     ++ +      L+   +  ++ G  H   +++ G+ V+ +G  
Sbjct: 1959 LFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDG 2018

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G++  +  PT ++AL+   ++ V CG+  + A+
Sbjct: 2019 DFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVAL 2058



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 35/268 (13%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G    D G    G+  + +       P+ +E+    +V  +S G KH+A+VT 
Sbjct: 1906 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVIQLSCGFKHSAVVTA 1955

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG-EIYTW 338
            +G++F +G G  GRLG     +   P  V  L    +  V+CG   T  ++  G  ++ +
Sbjct: 1956 DGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAF 2015

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G  + G   +G+  +    LP K+   L G  + KVACG   +  +S  G++FT+G    
Sbjct: 2016 GDGDFGK--LGQGNTVGKHLPTKI-KALQGHVIKKVACGTQFSVALSKYGKVFTWGQER- 2071

Query: 399  GVLGHGNLQNVS--QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             ++G  + +  S  QP+EV SL G  ++ V CG  HT  +              G ++ W
Sbjct: 2072 -LIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTS-----------DGDVWGW 2119

Query: 457  GDADKGR--LGHVDG---ERKLLPTCVT 479
            G   +G+  LGH +    E +L+P C+T
Sbjct: 2120 GSNSEGQLGLGHTNSPVREPQLVP-CLT 2146


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 180/378 (47%), Gaps = 30/378 (7%)

Query: 253 PKLLESAVMLDVQNISLG--AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           P+L+ES    +V  ++     KH   +T EGEV+ WG G  GRLGH  + +V C K  + 
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHG-DTNV-CYKGQKV 237

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGV 369
           L  + V           ALT  GE+Y+WG+ + G    G+  SR    L R L     G 
Sbjct: 238 L--VIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGR 295

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V  + CG  ++A ++  G+LFT+G G +G LGHG+ ++   P  V SL+G +V  + CG
Sbjct: 296 HVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCG 355

Query: 430 PW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
                T A+ D            G +++WGD D G+LG    +    P  + RL   D V
Sbjct: 356 SGDAQTLAVTD-----------DGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIV 404

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSY 546
           +  CG   ++ LT  G ++T G     +LG+   +  R    +EG L+ + V  ++ GS 
Sbjct: 405 RVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEG-LRGKKVVDVAVGSM 463

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH 606
           H  V+T  G VY WG+N  GQLG      +  PT +  L  + +  + CG + +      
Sbjct: 464 HCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLM-PLDGKSISGIACGPAQSFCWTST 522

Query: 607 KSISVGDQSSCSQCRMPF 624
              SVG        R+PF
Sbjct: 523 GHWSVG-------LRVPF 533



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 175/377 (46%), Gaps = 54/377 (14%)

Query: 131 GSPSLSLSERCF----SDGLSYSSDSFYSSESSSSQI-QNLSNI-ITPSSPHMETENFM- 183
           G   L+ +ERC       G  Y    FYSSES   Q+ ++L++  +   + H E +++M 
Sbjct: 148 GVLQLACAERCLIALTKTGRVYMC--FYSSESQGPQLMESLADKEVLKVAAHPEGKHYMA 205

Query: 184 --------KW------ELNYADTR-CPKNESHRLVTPTYGSPLIERKDILK-----DVMI 223
                    W       L + DT  C K +   ++   Y     E K  +      +V  
Sbjct: 206 LTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHP---EGKHYMALTSEGEVYS 262

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG G  GG +G   D +  +  T V  L  K L   V+    +I  G+ ++A +T +GE+
Sbjct: 263 WGNGD-GGRLGHG-DTNSREEPTLVRGLSGKQLGRHVV----HIVCGSTYSAAITADGEL 316

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG--EFQTCALTKSGEIYTWGHN 341
           F WG G  GRLGH  + D   P LV  L G  V  + CG  + QT A+T  G +++WG  
Sbjct: 317 FTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDG 376

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           ++G   +G   S     P K+ D L G  + +V CG   +  ++ +G ++T+G G    L
Sbjct: 377 DYGK--LGRGGSDGCKTP-KIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRL 433

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           GHG  +++  PK++E LRG KV  VA G  H   + +            G+++ WG  D+
Sbjct: 434 GHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEE-----------GEVYGWGRNDQ 482

Query: 462 GRLGHVDGERKLLPTCV 478
           G+LG      K  PT +
Sbjct: 483 GQLGDSSFSTKSDPTLM 499



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 38/304 (12%)

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           E L  + V  ++C E    ALTK+G +Y   +++                  +L ++L  
Sbjct: 142 EMLGELGVLQLACAERCLIALTKTGRVYMCFYSSESQG-------------PQLMESLAD 188

Query: 369 VRVSKVAC---GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
             V KVA    G+ + A+ S  G+++++G+G  G LGHG+  NV         +G KV  
Sbjct: 189 KEVLKVAAHPEGKHYMALTS-EGEVYSWGNGDGGRLGHGD-TNVC-------YKGQKVLV 239

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL---- 481
           +   P+H             +    G++++WG+ D GRLGH D   +  PT V  L    
Sbjct: 240 IVY-PYHPEG------KHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQ 292

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
           +    V   CG   +  +T  G+++T G   +G+LG+  ++D+    +   LK   V  I
Sbjct: 293 LGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDI 352

Query: 542 --SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
              SG      +T  G+V++WG    G+LG G S   +TP  ++ L+ + +  V CG+  
Sbjct: 353 CCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQF 412

Query: 600 TAAI 603
           + A+
Sbjct: 413 SLAL 416



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 19/194 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PK+++     D+  +  GA+ +  +TK 
Sbjct: 370 VWSWGDGDYGKLGRGGSDGCKT----------PKIIDRLQGQDIVRVCCGAQFSLALTKT 419

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G ++ WG+G   RLGH     +  PK +E L G  V  V+ G      +T+ GE+Y WG 
Sbjct: 420 GHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGR 479

Query: 341 NNHG--ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           N+ G   D     +S    +P      LDG  +S +ACG   +   +++G         F
Sbjct: 480 NDQGQLGDSSFSTKSDPTLMP------LDGKSISGIACGPAQSFCWTSTGHWSVGLRVPF 533

Query: 399 GV-LGHGNLQNVSQ 411
            V + HG  Q++ Q
Sbjct: 534 VVDVCHGTFQHLDQ 547


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 171/346 (49%), Gaps = 25/346 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G    A ++ +G+V+ WG G+ G+LGH  + + + P+LVE L G N+  VS G    
Sbjct: 96  VAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHM 155

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            A+ K G +Y WG     A   G   +   ++PR +   L+  +V  V+CG  HTA V+ 
Sbjct: 156 AAIDKDGHLYCWGR----AASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTE 211

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+++T+G+G  G LGHG   +  QPK+V+SL   KV  VACG        D  +  C+S
Sbjct: 212 KGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLT-EKVVDVACGR-------DFTIFVCES 263

Query: 447 NAIGGKLFTWGDADKGR--LGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                 L++ G  D G+  LG   GER +  P  ++     D V  S G      L   G
Sbjct: 264 G-----LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDG 318

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            VYT G    GQLG+ +  D S+      L+   +  ++ G  H A +T  G +YTWG+ 
Sbjct: 319 LVYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRG 378

Query: 564 ANGQLGLGDSQE-----RETPTFVEALRDRQVESVVCGSSITAAIC 604
            +GQLG G   E     R +P  V +L    V  V  GS  +A +C
Sbjct: 379 RDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLC 424



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 49/92 (53%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ L    + DV  IS G  H   + ++G V+ WG G++G+LGH    D S  K V+ L 
Sbjct: 290 PRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLR 349

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
              +  V+CG   T A+TK G +YTWG    G
Sbjct: 350 NFEIVQVACGGGHTAAVTKDGVLYTWGRGRDG 381



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 33/61 (54%)

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A L +G  + T+G N  GQLG G  +  + P  VEAL  +++  V  G S TAAI L   
Sbjct: 52  AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGD 111

Query: 609 I 609
           +
Sbjct: 112 V 112


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 172/347 (49%), Gaps = 31/347 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSC 321
           +  ++ G  H A V K G ++  G    G+LG   +   +   P+LV  LS   V  VSC
Sbjct: 24  IHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSC 83

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVR--VSKVACGE 378
           G   TCA+  SGE+++WG ++ G   +G   + SH+ P+ + F  L G+   V+ V+CG 
Sbjct: 84  GHSHTCAIIDSGELFSWGDSSEGQ--LGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGY 141

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           +HT  V  +GQ+ ++G G  G LG GN     +P  + SL   ++  V CG +HT     
Sbjct: 142 YHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLS--QIIKVKCGFYHT----- 194

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
           + +D        G++++ G  D+G+LG    E  +    +   ++  F++       +  
Sbjct: 195 LFLDES------GRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAA 248

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           +T   ++Y  G +  GQ   P+     + + +G + E     IS G++    +T  G VY
Sbjct: 249 ITDANEIYFFGKSQLGQFLYPQL----VRICQGDVNE-----ISIGNHFGVAVTYDGKVY 299

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +WG N  GQLG GDS  R  P+ VE L +++V S  CG +    ICL
Sbjct: 300 SWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENYV--ICL 344



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 96/253 (37%), Gaps = 48/253 (18%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V ++S G  H   V K G+V  +G GK G+LG         P L+  LS   +  V CG 
Sbjct: 134 VTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLS--QIIKVKCGF 191

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + T  L +SG +Y+ G N+ G   +G+  +  +    +L   L+   + K+  G    AI
Sbjct: 192 YHTLFLDESGRVYSCGLNDEGQ--LGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAI 249

Query: 384 ------------------------------------------VSTSGQLFTYGDGTFGVL 401
                                                     V+  G+++++G    G L
Sbjct: 250 TDANEIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQL 309

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL--FTWGDA 459
           G G+      P  VE L   KV S  CG  +   +  +M  R    A   K+  F   D 
Sbjct: 310 GQGDSDVRIIPSLVEPLNEKKVISATCGENYVICLGQVMNSRLAKLASQKKMLKFQSPDN 369

Query: 460 DKGRLGHVDGERK 472
           +   L +VD E K
Sbjct: 370 NNNSLINVDKEGK 382


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 191/420 (45%), Gaps = 40/420 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V     + D  + K        +V+++  G++H   V  +
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINK--------NVRDVGCGSRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH  +     P+ V  L    + +VSCGE  T AL   G++++WGH
Sbjct: 53  GTVYTCGCNDLGQLGH--DKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             +G   +G   +  +  +PR +  +L  V++ +VACG  H+  +S    +F++G   +G
Sbjct: 111 AVYGQ--IGLSTAEEYIRVPRNI-KSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  ++    P+ ++SL G+    +A G  H+ A+            I G +F WG 
Sbjct: 168 QLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL-----------TISGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG- 517
              G+LG  D   + +P  +  L     +   CG   T  LT  G V+T G+  +GQLG 
Sbjct: 217 NKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 518 ---NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDS 573
              N +   R +  + G +    V  I+ G  H +A + S G +Y++G   NGQLG G +
Sbjct: 277 NSTNHEVNPRKVFELMGSI----VTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGST 332

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS-----SCSQCRMPFGFRR 628
             R++P  V+       + V          CL +  S GDQS     +   C  P  FRR
Sbjct: 333 INRKSPFTVKGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQSFAHYITIQNCHPPDDFRR 392


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 154/328 (46%), Gaps = 26/328 (7%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ---SVSCGEFQTCALTKSGEIYTWG 339
           +  WG   + +LG KV          E L   NV    S+S G + + ALT++G++Y WG
Sbjct: 600 LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWG 659

Query: 340 H---NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
                N    ++G  +     LP KL    D V VS    G +H+A V  +G+L T+G G
Sbjct: 660 RGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVVS---IGFYHSAAVRANGELLTWGVG 716

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             G LGHG+ QN  +PK ++SL    +  V CG  HT  +              GK++TW
Sbjct: 717 EEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTK-----------NGKVYTW 765

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G ++ G+LG  D  R   P  VT L  ++ +Q + G      LT   +V   G+     +
Sbjct: 766 GSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNG--AAM 823

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G   A   SI  +   LK   +  +  G Y  A ++  G VYTWG     +LG G++Q  
Sbjct: 824 G--AASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWG--TGQELGHGNNQTE 879

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAIC 604
            TP  VEALR++ +  + CG   TA + 
Sbjct: 880 STPKLVEALRNQSIRQISCGGRHTAFLT 907



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 162/332 (48%), Gaps = 27/332 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WG G +       +   + Q +   D LLP  LES  + D+  +S+G  H+A V  
Sbjct: 654 DVYMWGRGSVKNPPVPVL--GIPQIE---DQLLPIKLES--LTDIVVVSIGFYHSAAVRA 706

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            GE+  WG G++G+LGH    +   PK+++ L+   +  V CGE  T  LTK+G++YTWG
Sbjct: 707 NGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWG 766

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            + +G   +G+       +P      L+   V ++A G  H A+++ S ++  +G+G   
Sbjct: 767 SSEYGQLGLGDTTRYCKPMP---VTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNG--A 821

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            +G  ++  +S P  V SL+ L +  + CG + TAAI       C      G ++TWG  
Sbjct: 822 AMGAASI--ISIPTLVPSLKYLHIDKLCCGHYSTAAI-----SEC------GDVYTWGTG 868

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            +  LGH + + +  P  V  L +    Q SCG   T  LT  G+++T G    GQLG+ 
Sbjct: 869 QE--LGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQ 926

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
                    +E   K  F+      +Y++A+ 
Sbjct: 927 AGDQNKPKKIESLTKTTFISVSCGENYNIALF 958



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 74/272 (27%)

Query: 220 DVMIWG---EGVLG-GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           +++ WG   EG LG GD         +QN+ +     PK+++S     +  +  G KH  
Sbjct: 709 ELLTWGVGEEGQLGHGD---------TQNQVE-----PKVIQSLTSFWITQVQCGEKHTI 754

Query: 276 LVTKEGEVFCWGEGKDGRLG----------------HKVNM------------------- 300
            +TK G+V+ WG  + G+LG                 K N+                   
Sbjct: 755 CLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEV 814

Query: 301 -------------DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL 347
                         +S P LV  L  +++  + CG + T A+++ G++YTWG    G +L
Sbjct: 815 LVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGT---GQEL 871

Query: 348 VGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH-GNL 406
            G   +++   P KL + L    + +++CG  HTA ++ SG++FT G  +FG LGH    
Sbjct: 872 -GHGNNQTESTP-KLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGD 929

Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           QN  +PK++ESL      SV+CG  +  A+ D
Sbjct: 930 QN--KPKKIESLTKTTFISVSCGENYNIALFD 959



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 21/236 (8%)

Query: 384 VSTSGQLFTYGDGTFGVLGH---GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           + TS  L T+G  +   LG       Q+   P+ + +     + S++ G +++AA+ +  
Sbjct: 594 LDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTE-- 651

Query: 441 VDRCKSNAIGGKLFTWG-----DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
                     G ++ WG     +     LG    E +LLP  +  L D   V  S G   
Sbjct: 652 ---------NGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDI--VVVSIGFYH 700

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           +  +   G++ T G    GQLG+   +++    V   L   ++  +  G  H   LT  G
Sbjct: 701 SAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNG 760

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            VYTWG +  GQLGLGD+     P  V AL    V  +  GS+  A +   K + V
Sbjct: 761 KVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLV 816


>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
 gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
          Length = 1196

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 143/298 (47%), Gaps = 30/298 (10%)

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G  +T+G G  G LGHGN ++  +P  ++    L V  VAC     AA++          
Sbjct: 928  GDAYTWGQGASGSLGHGNQEDKKEPLVMKDFLYLDVSMVACENSAGAAVM---------- 977

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVY 506
               G+LFTWG  +KGRLGH                +    Q + G   +  +T G G VY
Sbjct: 978  -FTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEGDGAVY 1024

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              GS ++GQ+GN      ++T +  K  +   K +  G  HV VL   GSVY WG    G
Sbjct: 1025 MWGSGIYGQIGN-NTNTHALTPMRVKFGKLKAKQLVCGVNHVLVLMEDGSVYGWGAGTYG 1083

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGF 626
            +LG G+  ++  P  +    D+ V  +  G S +AA+C H+ +   D   C  C+  F F
Sbjct: 1084 RLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAVCAHQWVPDKDADDCMSCKSKFTF 1143

Query: 627  RRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQ 684
             R++H+C  CG  FC +C+ K+I    L     +P RVCD CY   Q +T++ +  K+
Sbjct: 1144 LRRRHHCRYCGGIFCGSCTGKRI--TLLRFGFDEPVRVCDNCY---QILTNAAQTYKR 1196



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 27/225 (12%)

Query: 213  ERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAK 272
            E+ + + D   WG+G   G +G            Q D   P +++  + LDV  ++    
Sbjct: 922  EQFERIGDAYTWGQGA-SGSLGHG---------NQEDKKEPLVMKDFLYLDVSMVACENS 971

Query: 273  HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK- 331
              A V   GE+F WG+G+ GRLGH            E    + V+ ++ G   +  +T+ 
Sbjct: 972  AGAAVMFTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEG 1019

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
             G +Y WG   +G   +G   +     P ++      ++  ++ CG  H  ++   G ++
Sbjct: 1020 DGAVYMWGSGIYGQ--IGNNTNTHALTPMRV--KFGKLKAKQLVCGVNHVLVLMEDGSVY 1075

Query: 392  TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
             +G GT+G LG+GN  +   P  +       V+ +  G   +AA+
Sbjct: 1076 GWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAV 1120



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 30/232 (12%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            PK     ++ D++N     K      + G+ + WG+G  G LGH    D   P +++   
Sbjct: 902  PKFAPITIVHDMENEK--QKFKEQFERIGDAYTWGQGASGSLGHGNQEDKKEPLVMKDFL 959

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             ++V  V+C      A+  +GE++TWG         GE+    H       +T   + V 
Sbjct: 960  YLDVSMVACENSAGAAVMFTGELFTWGK--------GEKGRLGH-------ETFRNMPVK 1004

Query: 373  KVACGEWHTA-IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            ++A G  H+  I    G ++ +G G +G +G+    +   P  V+    LK K + CG  
Sbjct: 1005 QIAAGSAHSGCITEGDGAVYMWGSGIYGQIGNNTNTHALTPMRVK-FGKLKAKQLVCGVN 1063

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
            H   +++            G ++ WG    GRLG+ +   + +P  +    D
Sbjct: 1064 HVLVLME-----------DGSVYGWGAGTYGRLGNGNESDQRVPVRINFFDD 1104



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 2   DEKFLIWYSGQK---EKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSL 58
           DE  L+W S  K   E  + L  V KI  GQ T  FQ    PD +  SFS++Y   +R+L
Sbjct: 804 DETELMWGSPNKQSNESIVSLTDVKKICYGQNTAIFQKYKNPDLEGLSFSLLYR--DRTL 861

Query: 59  DLICKDKVQAESWFLGLRAAIS 80
           D++CKDK +  +W  G+   +S
Sbjct: 862 DIVCKDKQEYHTWVQGITYLLS 883


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 191/420 (45%), Gaps = 40/420 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V     + D  + K        +V+++  G++H   V  +
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINK--------NVRDVGCGSRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH  +     P+ V  L    + +VSCGE  T AL   G++++WGH
Sbjct: 53  GTVYTCGCNDLGQLGH--DKSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             +G   +G   +  +  +PR +  +L  V++ +VACG  H+  +S    +F++G   +G
Sbjct: 111 AVYGQ--IGLSTAEEYIRVPRNI-KSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  ++    P+ ++SL G+    +A G  H+ A+            I G +F WG 
Sbjct: 168 QLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFAL-----------TISGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG- 517
              G+LG  D   + +P  +  L     +   CG   T  LT  G V+T G+  +GQLG 
Sbjct: 217 NKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 518 ---NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDS 573
              N +   R +  + G +    V  I+ G  H +A + S G +Y++G   NGQLG G +
Sbjct: 277 NSTNHEVNPRKVFELMGSI----VTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGST 332

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS-----SCSQCRMPFGFRR 628
             R++P  V+       + V          CL +  S GDQS     +   C  P  FRR
Sbjct: 333 INRKSPFTVKGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQSFAHYITIQNCHPPDDFRR 392


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 175/349 (50%), Gaps = 17/349 (4%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-EVFCWGEGKDGRLGH 296
           DG +    T  D L P  L +    D+  ++ GA H    ++ G +V+ WG G  GRLGH
Sbjct: 43  DGQLGHGDTD-DRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGH 101

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
             + D+  P  ++ L G+ +Q ++CG+    A+T   ++ +WG N +G   +G   +   
Sbjct: 102 GDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGE--LGLGTAEDS 159

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            LP+K+    + + +  VA G  H+  ++  G L+ +G G +G LG G+  +   P++V 
Sbjct: 160 LLPQKI-QIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV- 217

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++ G K+  VACG  HT          C S++  G L+T G    G+LGH D E  L+P 
Sbjct: 218 TVDGDKMAMVACGWRHTI---------CVSSS--GGLYTNGWGKYGQLGHGDFEDHLVPR 266

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L D    Q S G   ++ LT  G++   G    GQ+G     D    +      ++
Sbjct: 267 KVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQ 326

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V+ IS G  H   +T   +VY+WG+ ANGQLG G++ +R  PT +EA 
Sbjct: 327 KVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAF 375



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 18/339 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S GA H+  +     V  WG G+DG+LGH    D   P  +  L G ++  V+CG   T
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHT 78

Query: 327 CALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            A ++SG ++Y+WG  + G   +G        +P  +   L G+ + ++ACG+ H   V+
Sbjct: 79  MARSESGRDVYSWGWGDFGR--LGHGDHSDLLIPHPI-KALQGLMIQQIACGDSHCLAVT 135

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
              Q+ ++G    G LG G  ++   P++++    + +K VA G  H+ AI         
Sbjct: 136 MDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK------- 188

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGK 504
                G L+ WG    G LG  D   +LLP  VT  VD D     +CG   T+ ++  G 
Sbjct: 189 ----DGNLYGWGWGRYGNLGLGDRNDRLLPEKVT--VDGDKMAMVACGWRHTICVSSSGG 242

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           +YT G   +GQLG+   +D  +      L ++F+  +S G  H   LTS G +  WG N 
Sbjct: 243 LYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNK 302

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQ+G+G++ +  +P  V    D++V+ + CG   T A+
Sbjct: 303 FGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAV 341



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 157/320 (49%), Gaps = 26/320 (8%)

Query: 212 IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
           + R +  +DV  WG G    D G    G  S      D L+P  +++   L +Q I+ G 
Sbjct: 79  MARSESGRDVYSWGWG----DFGRLGHGDHS------DLLIPHPIKALQGLMIQQIACGD 128

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
            H   VT + +V  WG  ++G LG     D   P+ ++    I ++ V+ G   + A+TK
Sbjct: 129 SHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK 188

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            G +Y WG   +G   +G+R  R   LP K+  T+DG +++ VACG  HT  VS+SG L+
Sbjct: 189 DGNLYGWGWGRYGNLGLGDRNDRL--LPEKV--TVDGDKMAMVACGWRHTICVSSSGGLY 244

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           T G G +G LGHG+ ++   P++V++L    +  V+ G  H+ A+              G
Sbjct: 245 TNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTS-----------SG 293

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +L  WG    G++G  +      P  V    D      SCG   T+ +T    VY+ G  
Sbjct: 294 QLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRG 353

Query: 512 VHGQLGNPKAKDRSI-TVVE 530
            +GQLGN +  DR++ T++E
Sbjct: 354 ANGQLGNGETIDRNVPTIIE 373



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 13/239 (5%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           RV  V+ G  H+  + +   + ++G G  G LGHG+  +   P ++ +L G  +  V CG
Sbjct: 15  RVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCG 74

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A       R +S   G  +++WG  D GRLGH D    L+P  +  L      Q 
Sbjct: 75  ADHTMA-------RSES---GRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQI 124

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T   +V + G   +G+LG   A+D  +       +E  +K +++G+ H  
Sbjct: 125 ACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSV 184

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
            +T  G++Y WG    G LGLGD  +R  P  V    D+ +  V CG   T  IC+  S
Sbjct: 185 AITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDK-MAMVACGWRHT--ICVSSS 240



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           VQ IS G +H   VT+   V+ WG G +G+LG+   +D + P ++E  S
Sbjct: 328 VQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFS 376


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 177/361 (49%), Gaps = 24/361 (6%)

Query: 248 VDALLPKLLESA---VMLDVQNISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVS 303
           +DA L  + + A   V+L    +S GA H+  +   G V C WG G+DG+LGH    D  
Sbjct: 1   MDAALSAVADEAPPAVVL----VSAGASHSVALLA-GNVLCTWGRGEDGQLGHGDAEDRL 55

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
            P ++       + SV CG   T A ++   ++Y+WG  + G   +G   S   + P+ +
Sbjct: 56  VPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGR--LGHGNSTDVFTPQPV 113

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G+++ ++ACG+ H   V+ +G++ ++G    G LG G  ++   P+ +++  G+ 
Sbjct: 114 -KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS 172

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           VK +A G  HTAA+ +            G ++ WG    G LG  D   + +P  V+ + 
Sbjct: 173 VKMIAAGAEHTAAVTE-----------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVE 221

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
               V  +CG   T+ ++  G +YT G + +GQLG+   +D  +      LK+     IS
Sbjct: 222 GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQIS 281

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H   LTS G +Y WG N  GQ+G GD+ +  +P  V    +++V  V CG   T A
Sbjct: 282 GGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLA 341

Query: 603 I 603
            
Sbjct: 342 F 342



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 128/252 (50%), Gaps = 14/252 (5%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D   P+ +++   + ++ ++ G  H   VT  GEV  WG  ++G+LG     D   P+ +
Sbjct: 106 DVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTI 165

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           +   GI+V+ ++ G   T A+T+ G+IY WG   +G   +G+R  R  ++P K+  +++G
Sbjct: 166 QAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDR--FVPEKV-SSVEG 222

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            ++  VACG  HT  VS+SG L+TYG   +G LGHG+ ++   P +VE+L+      ++ 
Sbjct: 223 DKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISG 282

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HT A+              GKL+ WG    G++G  D      P  V    +    Q
Sbjct: 283 GWRHTMALTS-----------DGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQ 331

Query: 489 ASCGRMLTVGLT 500
            +CG   T+  T
Sbjct: 332 VACGWRHTLAFT 343



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  S G   +V L     + T G    GQLG+  A+DR +  V        +  +  G+ 
Sbjct: 17  VLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGAD 76

Query: 547 HVAVLTSG-GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           H    +     VY+WG    G+LG G+S +  TP  V+AL+  +++ + CG S   A+ +
Sbjct: 77  HTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTM 136


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 34/421 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V     + D  + K        +V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--------NVRDVGCGNRHTGFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH  +     P+ V  L    + +VSCGE  T AL   G++++WGH
Sbjct: 53  GTVYTCGCNDLGQLGH--DKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             HG   +G   +  +  +PR +  +L  +++ +VACG  H+  +S    ++++G   +G
Sbjct: 111 AAHGQ--IGVSIAEDYIRVPRNI-KSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYG 167

Query: 400 VLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G+  +  S P+ ++SL G+    +A G  H+ A+            I G +F WG 
Sbjct: 168 QLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFAL-----------TISGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   +  P  +  L     +   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
             A          +L    V  I+ G  H +A + S G +Y++G   NGQLG+G +  ++
Sbjct: 277 NSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS-----SCSQCRMPFGFRRKKHN 632
           +P+ V+       + V          C+ +  S GDQS     +   C  P  FR  K N
Sbjct: 337 SPSMVKGNWLTHEDYVRRLPEANGCYCVKRIYSGGDQSFAHYFTIQNCLPPDDFR--KCN 394

Query: 633 C 633
           C
Sbjct: 395 C 395


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 34/421 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V     + D  + K        +V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--------NVRDVGCGNRHTGFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH  +     P+ V  L    + +VSCGE  T AL   G++++WGH
Sbjct: 53  GTVYTCGCNDLGQLGH--DKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGH 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             HG   +G   +  +  +PR +  +L  +++ +VACG  H+  +S    ++++G   +G
Sbjct: 111 AAHGQ--IGVSIAEDYIRVPRNI-KSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYG 167

Query: 400 VLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G+  +  S P+ ++SL G+    +A G  H+ A+            I G +F WG 
Sbjct: 168 QLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALT-----------ISGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   +  P  +  L     +   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
             A          +L    V  I+ G  H +A + S G +Y++G   NGQLG+G +  ++
Sbjct: 277 NSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS-----SCSQCRMPFGFRRKKHN 632
           +P+ V+       + V          C+ +  S GDQS     +   C  P  FR  K N
Sbjct: 337 SPSMVKGNWLTHEDYVRRLPEANGCYCVKRIYSGGDQSFAHYFTIQNCLPPDDFR--KCN 394

Query: 633 C 633
           C
Sbjct: 395 C 395


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 167/332 (50%), Gaps = 20/332 (6%)

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG---EFQTCALTKS 332
            ++  +G V   GEG  GRLG   + D+    ++  L G  +  ++     +  + AL +S
Sbjct: 3371 VIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAES 3430

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            GE+++WG  + G   +G         PR++ + L   +V +VACG  H+A+V++ G+LFT
Sbjct: 3431 GEVFSWGDGDFGK--LGHGNPDRQRRPRQI-EALQTEQVVQVACGFKHSAVVTSDGKLFT 3487

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            +G+G FG LG G++ N   P+ V +L G ++  VACG  HTA +          +  G  
Sbjct: 3488 FGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACV----------STDGMT 3537

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            ++T+G+ D G+LG      KLLP  V  + +    +  CG  LT+ LT  GKV+  G  +
Sbjct: 3538 VWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCG--I 3595

Query: 513  HGQLGNPKAKDRSI--TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
                 +   ++R++    +   L +  ++ ++ G+ HV  LT+ G V  WG    GQLGL
Sbjct: 3596 DRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL 3655

Query: 571  GDSQERETPTFVEALRDRQVESVVCGSSITAA 602
                    P  +  L D+ +  +  G + +AA
Sbjct: 3656 PHVSLVRHPEIITELSDKGIRQISTGRTHSAA 3687



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 169/350 (48%), Gaps = 28/350 (8%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           V ++ +V+ WG     +L       +  P  V+      VQ V  G++ T A+   G + 
Sbjct: 344 VYEKSDVYVWGSNSSHQLAEGNQEKILMP--VKSKMFTQVQQVEAGQYCTFAIHWDGSVS 401

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHTAIVSTSGQLFTYG 394
             G  ++G   +GE  ++S  LP+++   LD V  ++S     + HT  ++ +G ++++G
Sbjct: 402 ACGKGSYGRLGLGESSNQS--LPKRIL--LDCVVKKLSSSKGSDGHTLALAETGVVYSWG 457

Query: 395 DGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN     QP+ +     G  +K +  G  H+AA+ D            GKL
Sbjct: 458 DGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTD-----------DGKL 506

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAV 512
           +TWG+ D GRLGH D   + +PT V  L +   V  +CG   T+ ++  GK V++ GS  
Sbjct: 507 YTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSV--ACGSSHTLVVSKDGKTVWSFGSGE 564

Query: 513 HGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           HG+LG  +  K     VVE  L+   ++ + +G++    LT+ G VYTWG  A   LG G
Sbjct: 565 HGKLGTGELGKVYRPQVVEA-LQGLTIQKVCAGTWFSMALTTAGEVYTWGSGA--ILGKG 621

Query: 572 DSQE-RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
            +      P +VE L   ++  +  G +   A+     +     +S  QC
Sbjct: 622 SADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQC 671



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 166/360 (46%), Gaps = 23/360 (6%)

Query: 247 QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           Q   L+P  ++S +   VQ +  G      +  +G V   G+G  GRLG   + + S PK
Sbjct: 366 QEKILMP--VKSKMFTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPK 423

Query: 307 --LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
             L++C+    + S    +  T AL ++G +Y+WG  ++G   +G     +H  P ++  
Sbjct: 424 RILLDCVVK-KLSSSKGSDGHTLALAETGVVYSWGDGDYGK--LGHGNCATHKQPERITG 480

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
              G  +  +  G  H+A V+  G+L+T+G+G  G LGHG+      P +V  L   +V 
Sbjct: 481 PFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLA--EVG 538

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
           SVACG  HT  +          +  G  ++++G  + G+LG  +  +   P  V  L   
Sbjct: 539 SVACGSSHTLVV----------SKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGL 588

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGS-AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              +   G   ++ LT  G+VYT GS A+ G+ G+  A       VE  L +  +  IS+
Sbjct: 589 TIQKVCAGTWFSMALTTAGEVYTWGSGAILGK-GSADAIVNLPMYVE-DLAQYRIVDISA 646

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
           G  H   LT    V+ WG N+ GQ G G +    T P  V  L    +  +  G+S + A
Sbjct: 647 GDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMA 706



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 142/296 (47%), Gaps = 17/296 (5%)

Query: 256  LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
            L+  V+ D+        H+  + + GEVF WG+G  G+LGH        P+ +E L    
Sbjct: 3406 LQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQ 3465

Query: 316  VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
            V  V+CG   +  +T  G+++T+G+ + G   +G   ++   LP ++   L+G R+ +VA
Sbjct: 3466 VVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKK--LPERVM-ALEGYRIGQVA 3522

Query: 376  CGEWHTAIVSTSGQ-LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
            CG  HTA VST G  ++T+G+G +G LG G       P++VE++  L +K V CG   T 
Sbjct: 3523 CGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTL 3582

Query: 435  AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGR 493
             +              GK+F  G  D+     +  ER +  P  +T L D+     + G 
Sbjct: 3583 FLTK-----------DGKVFVCG-IDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGT 3630

Query: 494  MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
               + LT  GKV   G    GQLG P         +  +L ++ ++ IS+G  H A
Sbjct: 3631 EHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSA 3686



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 28/288 (9%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINVQSVSCGEFQTCALTK 331
           H   + + G V+ WG+G  G+LGH        P ++     G  ++ +  G   + A+T 
Sbjct: 443 HTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTD 502

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-L 390
            G++YTWG  +HG   +G   S + ++P ++        V  VACG  HT +VS  G+ +
Sbjct: 503 DGKLYTWGEGDHGR--LGHGDSNARYVPTQVAGL---AEVGSVACGSSHTLVVSKDGKTV 557

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +++G G  G LG G L  V +P+ VE+L+GL ++ V  G W + A+              
Sbjct: 558 WSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMAL-----------TTA 606

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+++TWG       G  D     LP  V  L  +  V  S G    + LT   +V+  G+
Sbjct: 607 GEVYTWGSGAILGKGSADAIVN-LPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGT 665

Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
              GQ G     +P  +   +  +EG      ++ IS+G+ H    TS
Sbjct: 666 NSMGQCGQGHTCSPITRPLKVIGLEGV----SIRQISAGTSHSMAWTS 709



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 29/248 (11%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G    D G    G+ + +K       P L ++     ++ I  G +H+A VT +
Sbjct: 453 VYSWGDG----DYGKLGHGNCATHKQPERITGPFLGKT-----IKYIHAGYRHSAAVTDD 503

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTWG 339
           G+++ WGEG  GRLGH  +     P  V  L+   V SV+CG   T  ++K G+ ++++G
Sbjct: 504 GKLYTWGEGDHGRLGHGDSNARYVPTQVAGLA--EVGSVACGSSHTLVVSKDGKTVWSFG 561

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              HG    GE      + P ++ + L G+ + KV  G W +  ++T+G+++T+G G   
Sbjct: 562 SGEHGKLGTGELGKV--YRP-QVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSG--A 616

Query: 400 VLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           +LG G+    V+ P  VE L   ++  ++ G  H  A+ D             ++F WG 
Sbjct: 617 ILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTD-----------EHEVFAWGT 665

Query: 459 ADKGRLGH 466
              G+ G 
Sbjct: 666 NSMGQCGQ 673



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 29/277 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G    D G    G+  + +       P+ +E+     V  ++ G KH+A+VT 
Sbjct: 3432 EVFSWGDG----DFGKLGHGNPDRQRR------PRQIEALQTEQVVQVACGFKHSAVVTS 3481

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT-CALTKSGEIYTW 338
            +G++F +G G  G+LG     +   P+ V  L G  +  V+CG   T C  T    ++T+
Sbjct: 3482 DGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTF 3541

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G  ++G   +G   +    LP+K+ +T+  + + KV CG   T  ++  G++F  G    
Sbjct: 3542 GEGDYGK--LGLGYATMKLLPQKV-ETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRM 3598

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
                    + V +P+ + SL    ++ +A G  H      + +  C      GK+  WG 
Sbjct: 3599 PWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHV-----LFLTTC------GKVLGWGM 3647

Query: 459  ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGR 493
              +G+LG  HV   R   P  +T L D    Q S GR
Sbjct: 3648 TGEGQLGLPHVSLVRH--PEIITELSDKGIRQISTGR 3682



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 22/216 (10%)

Query: 224 WGEGVLGGDIG--GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG 281
           WGEG    D G  G  D +     TQV          A + +V +++ G+ H  +V+K+G
Sbjct: 509 WGEG----DHGRLGHGDSNARYVPTQV----------AGLAEVGSVACGSSHTLVVSKDG 554

Query: 282 E-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + V+ +G G+ G+LG      V  P++VE L G+ +Q V  G + + ALT +GE+YTWG 
Sbjct: 555 KTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG- 613

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
              GA L          LP  + D L   R+  ++ G+ H   ++   ++F +G  + G 
Sbjct: 614 --SGAILGKGSADAIVNLPMYVED-LAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQ 670

Query: 401 LGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            G G+    +++P +V  L G+ ++ ++ G  H+ A
Sbjct: 671 CGQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMA 706



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 7/158 (4%)

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF---DFVQASCGRMLTVGLTGLGKVYT 507
            G +   G+   GRLG  + +     + ++ L  F   D   +      ++ L   G+V++
Sbjct: 3376 GTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFS 3435

Query: 508  MGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    G+LG  NP  + R   +    L+ E V  ++ G  H AV+TS G ++T+G    
Sbjct: 3436 WGDGDFGKLGHGNPDRQRRPRQI--EALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDF 3493

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+LGLG    ++ P  V AL   ++  V CG + TA +
Sbjct: 3494 GKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACV 3531


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 167/332 (50%), Gaps = 28/332 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WG G +       +      N T  D LLP+ +ES  + ++  IS+G  H+A V  
Sbjct: 597 DVYMWGRGSVKNPPIATLG-----NGTFDDQLLPQKVES--LQEIVVISIGFYHSAAVKS 649

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            GE+  WG G+DG+LGH    +   PK+V+ ++   V  V CGE  T  LTK+G+++TWG
Sbjct: 650 NGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWG 709

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            + +G   +G+ +     +   L  +LD   + ++ACG  H A+++ + ++  +G+G   
Sbjct: 710 TSEYGQLGLGDTQKNCTPM---LVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNG--A 764

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            +G  N+  +S P  V SL+ + ++ ++CG + TAA+ +     C      G ++TWG  
Sbjct: 765 AMGSANI--ISIPIMVPSLKIMNIERLSCGHYSTAALTE-----C------GDVYTWGSG 811

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            +  LGH  G  +  P  V  L +    Q SCG      LT  GK+YT G    GQLG+ 
Sbjct: 812 QE--LGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA 869

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
                    ++  LK  F+  IS G  H A L
Sbjct: 870 AGDQNRPKKIDSLLKTTFMS-ISCGENHNAAL 900



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 169/390 (43%), Gaps = 72/390 (18%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ---SVSCGEF 324
           SL  + A  +     +  WG G   +LG K     S P   E L   N+    S+SCG +
Sbjct: 529 SLSMRSATQLDTSRGLMTWGSGSYCKLGFKSVEKDSQPT-PERLPNFNISDICSISCGSY 587

Query: 325 QTCALTKSGEIYTWGHN---NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
            + ALT++G++Y WG     N     +G        LP+K+ ++L  + V  ++ G +H+
Sbjct: 588 YSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKV-ESLQEIVV--ISIGFYHS 644

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A V ++G+L T+G G  G LGHG++ N   PK V+S+    V  V CG  HT  +     
Sbjct: 645 AAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTK--- 701

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA------------ 489
                    GK+FTWG ++ G+LG  D ++   P  VT L  +  +Q             
Sbjct: 702 --------NGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTN 753

Query: 490 ------------------------------------SCGRMLTVGLTGLGKVYTMGSAVH 513
                                               SCG   T  LT  G VYT GS   
Sbjct: 754 NREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSG-- 811

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
            +LG+      +   +   L+ + ++ IS G  H+A LT  G +YT GK+  GQLG   +
Sbjct: 812 QELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA-A 870

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
            ++  P  +++L      S+ CG +  AA+
Sbjct: 871 GDQNRPKKIDSLLKTTFMSISCGENHNAAL 900



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 27/300 (9%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDG 368
           L+ +N    S        L  S  + TWG  ++           S   P +L  F+  D 
Sbjct: 520 LNAVNSAESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISD- 578

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGT-----FGVLGHGNLQNVSQPKEVESLRGLKV 423
             +  ++CG +++A ++ +G ++ +G G+        LG+G   +   P++VESL+ + V
Sbjct: 579 --ICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVV 636

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
            S+  G +H+AA+        KSN   G+L TWG  + G+LGH D   + +P  V  +  
Sbjct: 637 ISI--GFYHSAAV--------KSN---GELLTWGCGEDGQLGHGDVFNQPIPKVVQSITS 683

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
               Q  CG   T+ LT  GKV+T G++ +GQLG    +     ++   L +  +  I+ 
Sbjct: 684 HWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIAC 743

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+ H AVLT+   V  +G  A     +G +     P  V +L+   +E + CG   TAA+
Sbjct: 744 GATHNAVLTNNREVLVFGNGA----AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAAL 799



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+ S     +  I+ GA H A++T   EV  +G G    +G   N+ +S P +V  L 
Sbjct: 727 PMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNG--AAMG-SANI-ISIPIMVPSLK 782

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL-VGERRSRSHWLPRKLFDTLDGVRV 371
            +N++ +SCG + T ALT+ G++YTWG    G +L  G   S +H    KL +TL    +
Sbjct: 783 IMNIERLSCGHYSTAALTECGDVYTWGS---GQELGHGHGTSEAH---PKLVETLRNQSI 836

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            +++CG  H A ++ SG+++T G   FG LGH    + ++PK+++SL      S++CG  
Sbjct: 837 RQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAA-GDQNRPKKIDSLLKTTFMSISCGEN 895

Query: 432 HTAAIVD 438
           H AA+ D
Sbjct: 896 HNAALFD 902



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK---SVACGPWHTAAIVDIM 440
           + TS  L T+G G++  LG  +++  SQP   E L    +    S++CG +++AA+ +  
Sbjct: 538 LDTSRGLMTWGSGSYCKLGFKSVEKDSQPTP-ERLPNFNISDICSISCGSYYSAALTE-- 594

Query: 441 VDRCKSNAIGGKLFTWG-----DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
                     G ++ WG     +     LG+   + +LLP  V  L +   V  S G   
Sbjct: 595 ---------NGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEI--VVISIGFYH 643

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           +  +   G++ T G    GQLG+    ++ I  V   +   +V  +  G  H   LT  G
Sbjct: 644 SAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNG 703

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
            V+TWG +  GQLGLGD+Q+  TP  V +L    +  + CG++  A +  ++ + V
Sbjct: 704 KVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLV 759


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 185/371 (49%), Gaps = 24/371 (6%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
           G ++G+  +  T  +AL       A +  VQ I  G +    VT +G+++  G G  GRL
Sbjct: 34  GGIEGAKVKVPTPCEAL-------ATLRPVQLIG-GEQTLFAVTADGKLYATGYGAGGRL 85

Query: 295 GHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           G      VS P L+E +  + ++  +V+ G     AL+  GE+Y+WG    G    G R 
Sbjct: 86  GIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS 145

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                 PR + ++L G+ V  VA G  H+A V+ +G L+T+G G +G LGH + ++  +P
Sbjct: 146 PCDR--PR-VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP 202

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           K VE+L+G +V  +ACG      +     D          +++WGD D G+LG    +  
Sbjct: 203 KLVEALQGHRVVDIACGSGDAQTLCLTDDD---------TVWSWGDGDYGKLGRGGSDGC 253

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEG 531
            +P  +  L     V+  CG   +V LT  G VYT G   + +LG+      R    V+G
Sbjct: 254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG 313

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            L+ + V  I++GS H    T  G VYTWG N  GQLG G +   + P  V AL+ ++V 
Sbjct: 314 -LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN 372

Query: 592 SVVCGSSITAA 602
            V CGS+ T A
Sbjct: 373 RVACGSAHTLA 383



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG IY WGHN+ G   +G        +P    + L  +R  ++  GE     V+  G+L+
Sbjct: 19  SGTIYGWGHNHRGQ--LGGIEGAKVKVPTPC-EALATLRPVQLIGGEQTLFAVTADGKLY 75

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             G G  G LG G  ++VS P  +ES++ + +K VA         V+     C + +  G
Sbjct: 76  ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVA---------VNSGGKHCLALSSEG 126

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++++WG+A+ G+LGH +      P  +  L   + V  + G   +  +T  G +YT G  
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGIS--SGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +G+LG+  ++D+    +   L+   V  I+  SG      LT   +V++WG    G+LG
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 246

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G S   + P  +++L    V  V CGS  + A+
Sbjct: 247 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 280



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 198 ESHRLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKL 255
           + HR+V    GS   +   +  D  V  WG+G  G    G  DG            +P  
Sbjct: 209 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG----------CKVPMK 258

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
           ++S   L V  +  G++ +  +TK G V+ WG+G   RLGH  +  V  P+ V+ L G  
Sbjct: 259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           V +++ G       T+ GE+YTWG N+ G   +G+  + +   PR L   L G +V++VA
Sbjct: 319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTTNAIQRPR-LVAALQGKKVNRVA 375

Query: 376 CGEWHTAIVSTS 387
           CG  HT   STS
Sbjct: 376 CGSAHTLAWSTS 387



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 101/223 (45%), Gaps = 17/223 (7%)

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG ++ +G    G LG      V  P   E+L  L+   +  G      +  +  D    
Sbjct: 19  SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGE---QTLFAVTAD---- 71

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGLGK 504
               GKL+  G    GRLG    E    PT +  +  V    V  + G    + L+  G+
Sbjct: 72  ----GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 127

Query: 505 VYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           VY+ G A  G+LG  N    DR   V+E     E V  +++G  H A +T+ G +YTWGK
Sbjct: 128 VYSWGEAEDGKLGHGNRSPCDRP-RVIESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGK 185

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
              G+LG  DS+++  P  VEAL+  +V  + CGS     +CL
Sbjct: 186 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 228


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 173/359 (48%), Gaps = 16/359 (4%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
           G + G V  +  +V  ++P+ ++     ++   + GA H  L+T +G+++  G    G+L
Sbjct: 320 GPIQGEVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQL 379

Query: 295 GHKV-NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           GH V ++    P+L+  L    +    CG   + ALT  G++Y+WG N  G   +G+   
Sbjct: 380 GHDVESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQ--LGQETD 437

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQP 412
            +  +  +L  ++   +V ++A G +H   ++ SG+L+ +G   +G LG G   + VS P
Sbjct: 438 TTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTP 497

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
             V+SL G+ +  +ACG  H+ A+        KS AI    F WG    G+LG  D   +
Sbjct: 498 TLVQSLAGVPIAFIACGGNHSFAV-------SKSGAI----FGWGKNTFGQLGLNDLNSR 546

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
             PT +  L        SCG   +V LT  G V+T G+   GQLG+    +  +  +  +
Sbjct: 547 QFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFE 606

Query: 533 LKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
           L    +  I+ G  H +A + S G +Y +G +  GQLG+G      TP  V      Q+
Sbjct: 607 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGPWQSQI 665



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 118/233 (50%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G + Q       ++P+L+ S     V  I+ G  H   +T  GE++ WG    G+
Sbjct: 425 GSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQ 484

Query: 294 LGHKV-NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  + N  VS P LV+ L+G+ +  ++CG   + A++KSG I+ WG N  G   + +  
Sbjct: 485 LGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 544

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           SR    P +L  TL  + V  V+CG+  +  ++  G +FT G GTFG LGHG+  N   P
Sbjct: 545 SRQ--FPTQL-RTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILP 601

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G K+  +ACG  HT A V             GK++ +G +  G+LG
Sbjct: 602 RMVFELMGSKITQIACGRRHTLAFV----------PSRGKIYGFGLSGVGQLG 644



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 15/305 (4%)

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           V  P+ ++ +    +   +CG   T  LT  G++Y+ G+N+HG  L  +  S  +  P +
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHG-QLGHDVESLPNKRP-Q 392

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRG 420
           L   L+   +++  CG  H+  ++  GQ++++G    G LG   +      P+ + S+  
Sbjct: 393 LLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAA 452

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVT 479
            +V  +A G +H  A+ +            G+L+ WG    G+LG  +  E+   PT V 
Sbjct: 453 KQVVQIAAGHYHCLALTN-----------SGELYAWGSNAYGQLGLGMTNEKVSTPTLVQ 501

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            L        +CG   +  ++  G ++  G    GQLG      R        L+   V+
Sbjct: 502 SLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVR 561

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            +S G      LT+GG V+T G    GQLG G       P  V  L   ++  + CG   
Sbjct: 562 YVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRH 621

Query: 600 TAAIC 604
           T A  
Sbjct: 622 TLAFV 626


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 184/385 (47%), Gaps = 37/385 (9%)

Query: 223  IWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            +WG GV  G +G  ++ +V ++       LP+ LE+    ++Q I LG     L +  G 
Sbjct: 1387 VWG-GVRHGQLG--LNMNVGRH-----CALPRRLEA--FDNMQTIELGLNCTFLCSASGA 1436

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC---GEFQTCALTKSGEIYTWG 339
            V   GEG  GRLGH  + D+S P LV  L G  V  +S     +  T A+T+SGE++TWG
Sbjct: 1437 VTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTWG 1496

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              ++G   +G   S     PR L +TL G  V    CG  HTA+V+ +G L+T+G G +G
Sbjct: 1497 DGDYGK--LGHGNSERQRRPR-LVETLVGETVVDGCCGYKHTAVVTATGYLYTFGYGDYG 1553

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHGN  +   P  V   +   + SV+CG  HT A+          +  G  ++ +GD 
Sbjct: 1554 RLGHGNTTSKKTPTLVHDCQ--NIASVSCGLNHTLAL----------SRDGMTVWAFGDG 1601

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            D G+LG  +      P  +  L +       CG   +V L   G VY  G      +G P
Sbjct: 1602 DFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFNGIGGP 1661

Query: 520  KAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                   TV+  KL+   + V  IS G+ +   L   G+V++WG N++GQ+G G   +  
Sbjct: 1662 GQ-----TVIPTKLETINKRVFQISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVH 1716

Query: 578  TPTFVEALRDRQVESVVCGSSITAA 602
             P     L   +++ V  G + + A
Sbjct: 1717 EPLL--TLTGHRIKQVRAGKTHSIA 1739



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 138/290 (47%), Gaps = 29/290 (10%)

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            Y WG   HG   +     R   LPR+L  FD +  + +  + C    T + S SG + + 
Sbjct: 1386 YVWGGVRHGQLGLNMNVGRHCALPRRLEAFDNMQTIELG-LNC----TFLCSASGAVTST 1440

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG---PWHTAAIVDIMVDRCKSNAIG 450
            G+G++G LGHGN  ++S P  V +L+G  V  ++       HT AI +            
Sbjct: 1441 GEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE-----------S 1489

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G+LFTWGD D G+LGH + ER+  P  V  LV    V   CG   T  +T  G +YT G 
Sbjct: 1490 GELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTFGY 1549

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNANGQLG 569
              +G+LG+     +    +    +   +  +S G  H   L+  G +V+ +G    G+LG
Sbjct: 1550 GDYGRLGHGNTTSKKTPTLVHDCQN--IASVSCGLNHTLALSRDGMTVWAFGDGDFGKLG 1607

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            LG++   ++P  + AL +  ++SV CG   +  + ++     GD   C Q
Sbjct: 1608 LGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAIN-----GDVYVCGQ 1652


>gi|303271437|ref|XP_003055080.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463054|gb|EEH60332.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1071

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 176/409 (43%), Gaps = 85/409 (20%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI-NVQS--- 318
           D ++I+LG +HA   T+ G V+ WG+G  GRLGH   +D + P  V     + +V++   
Sbjct: 265 DPRSIALGTRHAVAATRAGGVYTWGDGVGGRLGHGDVVDRATPTRVRAADDVFDVKAGGG 324

Query: 319 --------VSCGEFQTCALT----------KSGEIYTWGHNNHGADLVGERR------SR 354
                   V CG  +T  LT            G +Y WG +     + G         + 
Sbjct: 325 GDGGARAVVRCGGDRTVVLTRDRDDDGVEDGGGALYAWGGSGDDFGVGGGGGGSSAEDAA 384

Query: 355 SHW-LPRKLFDTLDG----VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
           + W L R  F +        R+++V+ G +H A VS  G LFT+G+G F  LGHG     
Sbjct: 385 TRWTLSRIWFSSSSSSSPEARITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGGGGG 444

Query: 410 S-------------QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
                         +P+ VE LRG  V  V+CG WHTAA+VD            G+L+TW
Sbjct: 445 GGGGGASRPPTSEPRPRRVEGLRGRVVADVSCGVWHTAAVVD-----------DGQLYTW 493

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFD-------------------FVQASCGRMLTV 497
           GD D G+LGH D    +      R+ D+                     V ASCG+  T+
Sbjct: 494 GDGDGGKLGHADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAASCGQSHTL 553

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            L   G  + +GS   G+ G P     R I  +      + V  +SSG  H A LT  G 
Sbjct: 554 ALDANGVAWCLGSV--GKTGAPPPPTPRRIASI-----PDAVASLSSGDSHAAALTRRGR 606

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVE-ALRDRQVESVVCGSSITAAIC 604
           +Y WG    G LG G   E   P  +E AL  R +  V CG   TA + 
Sbjct: 607 LYVWGVGKRGALGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVV 655



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 29/206 (14%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD---VSCPKLVE 309
           P+ +E      V ++S G  H A V  +G+++ WG+G  G+LGH    D   V  P+ V 
Sbjct: 460 PRRVEGLRGRVVADVSCGVWHTAAVVDDGQLYTWGDGDGGKLGHADVTDDVPVPTPRRVA 519

Query: 310 CLSG----------------INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
             +                 + + + SCG+  T AL  +G  +  G        VG+  +
Sbjct: 520 DWTPGGGGGGGGEEKNASEIVVIVAASCGQSHTLALDANGVAWCLGS-------VGKTGA 572

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
                PR++    D   V+ ++ G+ H A ++  G+L+ +G G  G LGHG       P+
Sbjct: 573 PPPPTPRRIASIPDA--VASLSSGDSHAAALTRRGRLYVWGVGKRGALGHGGFGEELAPR 630

Query: 414 EVE-SLRGLKVKSVACGPWHTAAIVD 438
            +E +L G  ++ V CGP  TA +VD
Sbjct: 631 LLEGALEGRTIREVTCGPESTAVVVD 656



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 23/261 (8%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-----------DLVGERRSRSHWLPRKLF 363
            +  VS G F   A++  G ++TWG     A                R   S   PR++ 
Sbjct: 405 RITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGGGGGGGGGGASRPPTSEPRPRRV- 463

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN---VSQPKEVESLRG 420
           + L G  V+ V+CG WHTA V   GQL+T+GDG  G LGH ++ +   V  P+ V     
Sbjct: 464 EGLRGRVVADVSCGVWHTAAVVDDGQLYTWGDGDGGKLGHADVTDDVPVPTPRRVADWTP 523

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSN---AIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
                      + + IV I+   C  +   A+      W     G +G         P  
Sbjct: 524 GGGGGGGGEEKNASEIVVIVAASCGQSHTLALDANGVAWC---LGSVGKTGAPPPPTPRR 580

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEE 536
           +  + D      S G      LT  G++Y  G    G LG+    ++ +  ++EG L+  
Sbjct: 581 IASIPDA-VASLSSGDSHAAALTRRGRLYVWGVGKRGALGHGGFGEELAPRLLEGALEGR 639

Query: 537 FVKGISSGSYHVAVLTSGGSV 557
            ++ ++ G    AV+    ++
Sbjct: 640 TIREVTCGPESTAVVVDAAAL 660



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)

Query: 959  SKLEYAEQYEPGIYITF-TTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVYQKYGI 1017
            S+ E+ E++EPG+++T      +G++ L+RVRFS+  F + AA  WWE N+  + ++ G+
Sbjct: 1005 SESEWIEEHEPGVFLTVGVDATTGEETLRRVRFSKTTFKDGAARGWWEANRARIVRERGL 1064


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 176/366 (48%), Gaps = 29/366 (7%)

Query: 256  LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
            L ++     Q I  G     ++   G V   GEG  GRLG   + D+    +V  L G  
Sbjct: 1015 LHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFV 1074

Query: 316  VQSV--SCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            V  +  S G +  + ALT+SGE+++WG  ++G   +G   S     PR++ + L G  V 
Sbjct: 1075 VTQLVTSVGSDGHSLALTESGEVFSWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVI 1131

Query: 373  KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            ++ACG  H+A+V+  G+L T+G+G +G LG G + N   P+ V++L    +  VACG  H
Sbjct: 1132 QIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNH 1191

Query: 433  TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
            T  +          +A G   + +GD D G+LG  +   K  P  +  L      + +CG
Sbjct: 1192 TVCV----------SADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACG 1241

Query: 493  RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS------ITVVEGKLKEEFVKGISSGSY 546
               +V LT  G V T G      +G  +A+ R       +T + G   EE V     GS 
Sbjct: 1242 TQFSVALTRDGFVLTWGQ--DRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVV----VGSE 1295

Query: 547  HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ-VESVVCGSSITAAICL 605
            H   LTS G+V+ WG NA+GQLGLG +     P  +  L   + ++ +  G + +AA   
Sbjct: 1296 HTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAAWSG 1355

Query: 606  HKSISV 611
             K+ SV
Sbjct: 1356 AKAASV 1361



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 25/247 (10%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            +V  WG+G    D G    G+  + +       P+ +E+    +V  I+ G KH+A+VT 
Sbjct: 1096 EVFSWGDG----DYGKLGHGNSDRQRR------PRQIEALQGEEVIQIACGFKHSAVVTV 1145

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTW 338
            +G++  +G G  GRLG     +   P+ V+ L   ++  V+CG   T  ++  G   + +
Sbjct: 1146 DGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAF 1205

Query: 339  GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            G  ++G   +G   ++S   P K+ + L G++V KVACG   +  ++  G + T+G    
Sbjct: 1206 GDGDYGKLGLGNTSAKS--TPVKI-EALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRL 1262

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
                   ++    P++V +L G  ++ V  G  HT A+              G ++ WG 
Sbjct: 1263 IGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTS-----------DGNVWGWGL 1311

Query: 459  ADKGRLG 465
               G+LG
Sbjct: 1312 NADGQLG 1318


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 190/396 (47%), Gaps = 61/396 (15%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK--LVEC 310
           PK ++      VQ IS G+ H+ +VT++G++F  G    G+LG +     S PK  LV+ 
Sbjct: 39  PKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQA 98

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           + G+ V  V+ G++ T  L  +G++Y WG   H    +G +  +    P ++ +TL    
Sbjct: 99  MKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKK--LGSKAGK----PARI-ETLKQTI 151

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDG----TFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
           V ++ CG++H+A +S +G L+T+G G      G LGHG+L +V  P+ V+      +   
Sbjct: 152 V-QIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD----NIVKF 206

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR------ 480
           +CG +H  A+     D+       G+L++WG    G  G  + +  LLP  V        
Sbjct: 207 SCGGYHMMAL-----DK------DGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKH 255

Query: 481 -LVDFDFVQ---------ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
            ++D  FVQ          S G   ++ L+  G VY  G A HGQLG        I   E
Sbjct: 256 IIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLG--------IKATE 307

Query: 531 GKLKEEFVKGIS--------SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            + K + V GIS        +G  H  VLTS   VYT G N  GQLG+GD + R   T +
Sbjct: 308 NQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRI 367

Query: 583 EALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
             L  R+++ +  G + + A+  +    + D S  S
Sbjct: 368 NFLEQRRIKQLFAGGNHSWALIDYNQPRIDDYSPPS 403



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 20/164 (12%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLL-----ESAVMLD---VQN--------ISLGAKHAALV 277
           G  + G   Q + Q D+LLPK +     +  +++D   VQN        ISLG  H+ L+
Sbjct: 226 GSGMYGETGQGEFQ-DSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLL 284

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           + +G V+  G  + G+LG K   + +  +LV  +SG  +  ++ G   +  LT   ++YT
Sbjct: 285 SNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYT 344

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
            GHN  G   VG+  SR+ +      + L+  R+ ++  G  H+
Sbjct: 345 CGHNQAGQLGVGDYESRTQY---TRINFLEQRRIKQLFAGGNHS 385


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 185/385 (48%), Gaps = 37/385 (9%)

Query: 223  IWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
            +WG GV  G +G  ++ +V ++       LP+ LE+    ++Q I LG     L +  G 
Sbjct: 734  VWG-GVRHGQLG--LNMNVGRH-----CALPRRLEA--FDNMQTIELGLNCTFLCSASGA 783

Query: 283  VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC---GEFQTCALTKSGEIYTWG 339
            V   GEG  GRLGH  + D+S P LV  L G  V  +S     +  T A+T+SGE++TWG
Sbjct: 784  VTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTWG 843

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              ++G   +G   S     PR L +TL G  V    CG  HTA+V+ +G L+T+G G +G
Sbjct: 844  DGDYGK--LGHGNSERQRRPR-LVETLVGETVVDGCCGYKHTAVVTATGYLYTFGYGDYG 900

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGHGN  +   P  V   +   + SV+CG  HT A+          +  G  ++ +GD 
Sbjct: 901  RLGHGNTTSKKTPTLVHDCQ--NIVSVSCGLNHTLAL----------SRDGMTVWAFGDG 948

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            D G+LG  +      P  +  L +       CG   +V L   G VY  G      +G P
Sbjct: 949  DFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFNGIGGP 1008

Query: 520  KAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                   TV+  KL+  ++ V  IS G+ +   L   G+V++WG N++GQ+G G   +  
Sbjct: 1009 GQ-----TVIPTKLETIKKRVFQISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVH 1063

Query: 578  TPTFVEALRDRQVESVVCGSSITAA 602
             P     L   +++ V  G + + A
Sbjct: 1064 EPLL--TLTGHRIKQVRAGKTHSIA 1086



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 24/287 (8%)

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            Y WG   HG   +     R   LPR+L  FD +  + +  + C    T + S SG + + 
Sbjct: 733  YVWGGVRHGQLGLNMNVGRHCALPRRLEAFDNMQTIELG-LNC----TFLCSASGAVTST 787

Query: 394  GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG---PWHTAAIVDIMVDRCKSNAIG 450
            G+G++G LGHGN  ++S P  V +L+G  V  ++       HT AI +            
Sbjct: 788  GEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE-----------S 836

Query: 451  GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            G+LFTWGD D G+LGH + ER+  P  V  LV    V   CG   T  +T  G +YT G 
Sbjct: 837  GELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTFGY 896

Query: 511  AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNANGQLG 569
              +G+LG+     +    +    +   +  +S G  H   L+  G +V+ +G    G+LG
Sbjct: 897  GDYGRLGHGNTTSKKTPTLVHDCQN--IVSVSCGLNHTLALSRDGMTVWAFGDGDFGKLG 954

Query: 570  LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSS 616
            LG++   ++P  + AL +  ++SV CG   +  + ++  + V  Q +
Sbjct: 955  LGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDA 1001


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 168/353 (47%), Gaps = 26/353 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+  ++   L ++ I    +   ++T+ G+VF              + D  CP+ +  L 
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----------MYYSSDTQCPQEMTALD 511

Query: 313 GINVQSVSC---GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
              V  ++    G+    ALTK  E+Y+WG+ + G    G+  ++       L   L G 
Sbjct: 512 DKEVIKIAAHPEGK-HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEE---PTLIQALKGK 567

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            +  V CG  ++A +S +G L+T+G G +G LGHG  ++   P  + +L    +  VACG
Sbjct: 568 DIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACG 627

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
            ++   +       C ++   GK+++WGD D G+LG    +   LP  + +L +   VQ 
Sbjct: 628 SFYAHTL-------CITSQ--GKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQV 678

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
            CG   +V L+  G VYT G     +LG+P  ++     +   L++  V G+S G  HV 
Sbjct: 679 YCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVL 738

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            LT  G VY WGKN N Q+        + P  +EAL+ ++V  V CG + + A
Sbjct: 739 ALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFA 791



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 30/304 (9%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+  + LS + ++ + C +     LT++G+++   +            S     P+++  
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYY------------SSDTQCPQEM-T 508

Query: 365 TLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
            LD   V K+A    G+ H   ++   +++++G+G  G LGHG+     +P  +++L+G 
Sbjct: 509 ALDDKEVIKIAAHPEGK-HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGK 567

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +  V CG  ++AAI           +  G L+TWG  + GRLGH   E  L PT ++ L
Sbjct: 568 DIIDVECGGTYSAAI-----------SANGALYTWGRGNYGRLGHGTAEDCLTPTMISAL 616

Query: 482 VDFDFVQASCGRML--TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            D   ++ +CG     T+ +T  GKVY+ G   +G+LG   +    +  +  KL+   + 
Sbjct: 617 SDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIV 676

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            +  G+     L+  G VYTWGK    +LG    +    P  VE LRDR+V  V  G S 
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSH 736

Query: 600 TAAI 603
             A+
Sbjct: 737 VLAL 740



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 128/311 (41%), Gaps = 77/311 (24%)

Query: 190 ADTRCPKNES---HRLVTPTYGSP-----LIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
           +DT+CP+  +    + V      P     L   KD   +V  WG G  GG +G   D S 
Sbjct: 499 SDTQCPQEMTALDDKEVIKIAAHPEGKHYLALTKDY--EVYSWGNGD-GGRLGHG-DTST 554

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            +  T + AL  K        D+ ++  G  ++A ++  G ++ WG G  GRLGH    D
Sbjct: 555 KEEPTLIQALKGK--------DIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAED 606

Query: 302 VSCPKLVECLSGINVQSVSCGEF--QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
              P ++  LS  ++  V+CG F   T  +T  G++Y+WG  ++G   +G   S    LP
Sbjct: 607 CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGK--LGRGGSDGSKLP 664

Query: 360 RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV---------- 409
           R L + L  V++ +V CG   +  +S  G ++T+G G    LGH   +NV          
Sbjct: 665 R-LIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLR 723

Query: 410 ------------------------------------------SQPKEVESLRGLKVKSVA 427
                                                      QP+ +E+L+G KV  V 
Sbjct: 724 DRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVC 783

Query: 428 CGPWHTAAIVD 438
           CGP  + A  D
Sbjct: 784 CGPAQSFAWTD 794



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           + LT   +VY+ G+   G+LG+     +    +   LK + +  +  G  + A +++ G+
Sbjct: 528 LALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGA 587

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH---KSISVGD 613
           +YTWG+   G+LG G +++  TPT + AL D  +  V CGS     +C+    K  S GD
Sbjct: 588 LYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGD 647



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G          +G    + T+ +   P+++E      V  +SLG  H   +T +
Sbjct: 694 VYTWGKG----------EGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQ 743

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           GEV+ WG+ ++ ++     + V  P+L+E L G  V  V CG  Q+ A T   E
Sbjct: 744 GEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 165/325 (50%), Gaps = 29/325 (8%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCP----KLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           V+ WG+ K G+LG     +V  P     L + L+  NV+S+  G+  +  + + G++YTW
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 339 G---HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           G       G D+V E     H +P+     ++    S VACG  HT +V+ +G ++T+G+
Sbjct: 61  GRGWEGQLGHDVVTEIELEPHIVPK-----MENRGSSAVACGRNHTVVVTDNGLIYTWGE 115

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
              G LG G+L++ + P  ++S   L  V S+ACG +HT AI            I G ++
Sbjct: 116 NKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAI-----------CIEGTIW 164

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
           +WG    G+LGH + +    PT V  +     ++A+CG   T+ LT   K+Y  GS  +G
Sbjct: 165 SWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYG 224

Query: 515 QLGNPKAKDRSIT---VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           QLG  ++ D+++    +V+  L+      +  G  H   L     +YTWG+N  GQLGLG
Sbjct: 225 QLGLNRS-DKAVLQPDIVD-HLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLG 282

Query: 572 DSQERETPTFVEALRDRQVESVVCG 596
                  P  V ALR  +V+ + CG
Sbjct: 283 HYTHSPVPELVTALRSVRVQQIACG 307



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 150/332 (45%), Gaps = 24/332 (7%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSC 321
           +V++I  G  H+A++ ++G+V+ WG G +G+LGH V  ++   P +V  +      +V+C
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVAC 96

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   T  +T +G IYTWG N  G    G+ +S +   P  +   L+   V  +ACGE+HT
Sbjct: 97  GRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNS--PVLIDSALNLPSVLSIACGEFHT 154

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +   G ++++G    G LGHGN +    P +V  +        ACG  HT  + D   
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD--- 211

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLT 500
                     K++ WG    G+LG    ++ +L P  V  L         CG   ++ L 
Sbjct: 212 --------ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM 263

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG------ 554
              ++YT G    GQLG        +  +   L+   V+ I+ G  H     +       
Sbjct: 264 KNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGM 323

Query: 555 ---GSVYTWGKNANGQLGLGDSQERETPTFVE 583
                VY+WG+   GQLG  +   R TP  VE
Sbjct: 324 PPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLF---DTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           +Y+WG N +G   +G   +    LP  +    D L+   V  +  G+ H+A+++  G ++
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVP--LPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVY 58

Query: 392 TYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           T+G G  G LGH  +  +  +P  V  +      +VACG  HT  + D            
Sbjct: 59  TWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTD-----------N 107

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMG 509
           G ++TWG+   G+LG  D +    P  +   ++   V + +CG   TV +   G +++ G
Sbjct: 108 GLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWG 167

Query: 510 SAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
               GQLG+   K     T V G  K+  ++  + G  H  VLT    +Y WG NA GQL
Sbjct: 168 RNQCGQLGHGNTKTCYFPTQVVGMAKKICIRA-ACGGQHTLVLTDANKIYAWGSNAYGQL 226

Query: 569 GLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           GL  S +    P  V+ LR      V+CG S + A+  ++ I    ++ C Q
Sbjct: 227 GLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQ 278



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 11/116 (9%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G +  N++    L P +++        ++  G  H+  + K  +++ WG    G+LG   
Sbjct: 224 GQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGH 283

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE----------IYTWGHNNHG 344
                 P+LV  L  + VQ ++CG +  C    + E          +Y+WG    G
Sbjct: 284 YTHSPVPELVTALRSVRVQQIACG-YDHCVAFVADEVEPGMPPLEHVYSWGRGEEG 338


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  149 bits (376), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 184/410 (44%), Gaps = 31/410 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +  G   +G   +  +  +PR +  +L  +++ ++ACG +H+  +S   ++F++G    G
Sbjct: 111 DTDGQ--LGLPGTEEYIKVPRNI-KSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  L++ S P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS----SCSQCRMP 623
           +P  V+             S+     C+ K  S GDQS    SC Q   P
Sbjct: 337 SPFTVKGNWFPYSGKCSSNSNDEEYFCVKKIFSGGDQSFSHYSCPQNIGP 386


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 163/332 (49%), Gaps = 30/332 (9%)

Query: 270 GAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
           GA H  A   +E +++ WG G  GRLGH  + DV  P+ ++ L G+ +  ++CG+    A
Sbjct: 84  GADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +T +G +++WG N +G   +G   +    LP+K+    +GVRV  +A G  HTA V+  G
Sbjct: 144 VTVAGHVHSWGRNQNGQ--LGLGNTEDSLLPQKI-QAFEGVRVKMIAAGAEHTAAVTEDG 200

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            L+ +G G +G LG G+  +   P++V S+ G K+  VACG  HT  +           +
Sbjct: 201 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV-----------S 249

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC---------------GR 493
             G ++T+G +  G+LGH D E  L+P  +  L D    Q                  G 
Sbjct: 250 SSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGG 309

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
            +   L   GK+Y  G    GQ+G    +D    V      E+ V  ++ G  H   LT 
Sbjct: 310 GIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTE 369

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
             +V++WG+  +GQLG G+  +R  P  ++AL
Sbjct: 370 AKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 401



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 183/381 (48%), Gaps = 38/381 (9%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D  +P+  E +V+L    IS GA H+  +   G V  WG G+DG+LGH    D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 309 ECL----SGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
                   G     V CG   T A +    ++Y+WG  + G   +G   S   + P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGR--LGHGNSSDVFNPQPI- 123

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             L GVR++++ACG+ H   V+ +G + ++G    G LG GN ++   P+++++  G++V
Sbjct: 124 QALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
           K +A G  HTAA+ +            G L+ WG    G LG  D + +L+P  V+ +  
Sbjct: 184 KMIAAGAEHTAAVTE-----------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNG 232

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV----- 538
              V  +CG   T+ ++  G +YT G + +GQLG+   +D  +      LK+  +     
Sbjct: 233 QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEA 292

Query: 539 ----------KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
                     +G   G      L + G +Y WG N  GQ+G+GD+++  +P  V    ++
Sbjct: 293 VELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ 352

Query: 589 QVESVVCGSSITAAICLHKSI 609
           +V  V CG   T A+   K++
Sbjct: 353 KVVQVACGWRHTLALTEAKNV 373



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 15/286 (5%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D   P+ +++   + +  I+ G  H   VT  G V  WG  ++G+LG     D   P+ +
Sbjct: 116 DVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKI 175

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           +   G+ V+ ++ G   T A+T+ G++Y WG   +G   +G+R  R   +P K+  +++G
Sbjct: 176 QAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRL--IPEKV-SSVNG 232

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            ++  VACG  HT  VS+SG ++TYG   +G LGHG+ ++   P ++E+L+   +     
Sbjct: 233 QKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEA 292

Query: 429 GPWHTAAIVDIMVDRC--------KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
                  I   + D           + A  GKL+ WG    G++G  D E    P  V  
Sbjct: 293 ----VELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNF 348

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             +   VQ +CG   T+ LT    V++ G    GQLG+ +  DR+I
Sbjct: 349 PNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNI 394



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 37/252 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D+LLP+ +++   + V+ I+ GA+H A VT++G+++ WG G+ G LG     D   P+ V
Sbjct: 168 DSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKV 227

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL------ 362
             ++G  +  V+CG   T  ++ SG IYT+G + +G   +G      H +P KL      
Sbjct: 228 SSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQ--LGHGDFEDHLVPHKLEALKDT 285

Query: 363 -------------FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
                        F   +G RV      +W    ++  G+L+ +G   FG +G G+ ++ 
Sbjct: 286 TISQEEAVELIFFFLGDEGFRVGGGI--QW---ALAADGKLYGWGWNKFGQVGVGDNEDH 340

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             P +V      KV  VACG  HT A+ +              +F+WG    G+LGH + 
Sbjct: 341 CSPVQVNFPNEQKVVQVACGWRHTLALTEAK-----------NVFSWGRGTSGQLGHGEI 389

Query: 470 ERKLLPTCVTRL 481
             + +P  +  L
Sbjct: 390 VDRNIPKMIDAL 401



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  ++ G +H   +T+   VF WG G  G+LGH   +D + PK+++ LS
Sbjct: 354 VVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 402


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLHD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   +  P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSC-----SQCRMPFGFR 627
           +P  V+   +    +  C + I +    C+ +  S GDQS         CR P  FR
Sbjct: 337 SPFTVKG--NWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFAHYSNPQNCRPPDDFR 391



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D      K Q     P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID-----YKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V+++ACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 184/410 (44%), Gaps = 31/410 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +  G   +G   +  +  +PR +  +L  +++ ++ACG +H+  +S   ++F++G    G
Sbjct: 111 DTDGQ--LGLPGTEEYIKVPRNI-KSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  L++ S P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS----SCSQCRMP 623
           +P  V+             S+     C+ K  S GDQS    SC Q   P
Sbjct: 337 SPFTVKGNWFPYSGKCSSNSNDEEYFCVKKIFSGGDQSFSHYSCPQNIGP 386


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 53/385 (13%)

Query: 256  LESAVMLDVQNI-SLGAKHAALVTKEGEVFCWGEGKDGRLGHK--VNMDVSCPKL-VECL 311
            L   ++L  QN+ + G  HAA+V   G+V+ WG   +GRLG    +++D   P L VE L
Sbjct: 765  LPVGLLLPTQNVLACGQDHAAIVAN-GDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETL 823

Query: 312  S--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
               GI+V++V+CG+  T A+T+ G++Y+WG +++G   VG+R   S  +     + L G 
Sbjct: 824  HMHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVA---VEALSGQ 880

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            R   VACG+ HT +++   +L+++G G  G LGHG++++   PK V  L    +  ++ G
Sbjct: 881  RCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAG 940

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
              H+ A+ +            G+++ +G +  G+LG     +  +P  +  L        
Sbjct: 941  YAHSGALTN-----------DGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSIL 989

Query: 490  SCGRMLTVGLT-GLGKVYTMGSAV---------------HGQLGNPKAKDRSIT------ 527
            +CG    + +T    KVYT G +                  +  NP    +++T      
Sbjct: 990  TCGYYSNIAITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLP 1049

Query: 528  ---------VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                     +V   ++    K   SG+ H  +LT+ G +Y+WG N  GQLG+G+   +  
Sbjct: 1050 LENQHLLPSLVPTNIQAPIKKMTMSGN-HYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSV 1108

Query: 579  PTFVEALRDRQVESVVCGSSITAAI 603
            P  +   RD Q  +V  GS  + A+
Sbjct: 1109 PVLINRSRDDQFVAVAAGSRFSLAV 1133



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 17/263 (6%)

Query: 374  VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV---SQPKEVESLR--GLKVKSVAC 428
            +ACG+ H AIV+ +G ++T+G    G LG G++ ++   + P  VE+L   G+ V++VAC
Sbjct: 777  LACGQDHAAIVA-NGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G  HT A+              GKL++WG +  G+LG  D      P  V  L     + 
Sbjct: 836  GKEHTMAVTQ-----------EGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLS 884

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
             +CG++ T+ LT   ++++ G  VHGQLG+   +D+ +  +  +L +  + GIS+G  H 
Sbjct: 885  VACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHS 944

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              LT+ G V+ +G ++ GQLG G   +   P  ++AL    V  + CG     AI  +  
Sbjct: 945  GALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQ 1004

Query: 609  ISVGDQSSCSQCRMPFGFRRKKH 631
                   S  + R      RK+H
Sbjct: 1005 KVYTWGKSPLELRQALQLARKRH 1027



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 30/232 (12%)

Query: 233  IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
             G  V G +     + D +LPKL+       +  IS G  H+  +T +G+V+ +G    G
Sbjct: 904  FGWGVHGQLGHGDVE-DQILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSSSFG 962

Query: 293  RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYTWGHN----NHGADL 347
            +LG       + P  ++ LS  +V  ++CG +   A+T + + +YTWG +         L
Sbjct: 963  QLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWGKSPLELRQALQL 1022

Query: 348  VGERRSRS-----------------------HWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
              +R   S                       H LP  L  T     + K+     H  ++
Sbjct: 1023 ARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLP-SLVPTNIQAPIKKMTMSGNHYLML 1081

Query: 385  STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
            +T G L+++G    G LG GN  + S P  +   R  +  +VA G   + A+
Sbjct: 1082 TTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRDDQFVAVAAGSRFSLAV 1133


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLHD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   +  P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSC-----SQCRMPFGFR 627
           +P  V+   +    +  C + I +    C+ +  S GDQS         CR P  FR
Sbjct: 337 SPFTVKG--NWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFAHYSNPQNCRPPDDFR 391



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D      K Q     P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID-----YKKQAS---PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V+++ACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 180/360 (50%), Gaps = 26/360 (7%)

Query: 253 PKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           P L++    L  +  +S G+ ++A +T  G++  WG G  G+LG     D   P++   L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NL 89

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE-RRSRSHWL---PRKLFDTLD 367
           S  NV  V+C +  T A+  +GE+YTWG + +G    G+   S S+ +   P K+   L+
Sbjct: 90  SLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKV-KALE 148

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G +V +V+CG +HT  ++   +  T+G G  G LGHG+ Q++  PK +ESL GL +K ++
Sbjct: 149 GEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEIS 208

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDF 486
           CG  HTA ++           + GKL+ +G    G+LG    +  L+P  +   L D   
Sbjct: 209 CGGHHTAILL-----------VTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQI 257

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---NPKAKDRSITVVEGKLKEEFVKGISS 543
            + S G   +  +T  GKVYT G    G+LG   N    D         L++ F+  IS 
Sbjct: 258 TKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISC 315

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+ H   L+  G +YTWG   N   G+        P+    L+++ +  VVC SS + A+
Sbjct: 316 GNSHSVALSDVGDIYTWGMTKNIGHGI-QGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 180/360 (50%), Gaps = 26/360 (7%)

Query: 253 PKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           P L++    L  +  +S G+ ++A +T  G++  WG G  G+LG     D   P++   L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NL 89

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE-RRSRSHWL---PRKLFDTLD 367
           S  NV  V+C +  T A+  +GE+YTWG + +G    G+   S S+ +   P K+   L+
Sbjct: 90  SLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKV-KALE 148

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G +V +V+CG +HT  ++   +  T+G G  G LGHG+ Q++  PK +ESL GL +K ++
Sbjct: 149 GEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEIS 208

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDF 486
           CG  HTA ++           + GKL+ +G    G+LG    +  L+P  +   L D   
Sbjct: 209 CGGHHTAILL-----------VTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQI 257

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---NPKAKDRSITVVEGKLKEEFVKGISS 543
            + S G   +  +T  GKVYT G    G+LG   N    D         L++ F+  IS 
Sbjct: 258 TKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISC 315

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+ H   L+  G +YTWG   N   G+        P+    L+++ +  VVC SS + A+
Sbjct: 316 GNSHSVALSDVGDIYTWGMTKNIGHGI-QGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  147 bits (372), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 184/396 (46%), Gaps = 34/396 (8%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            L P+  +  +  +V+++  G++H   V  +G V+  G    G+LGH  +     P  V 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRKKPDQVG 63

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    + +VSCGE  T AL   G++++WGH  HG   +G   +  +  +PR +  +L  
Sbjct: 64  ALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ--IGLSVAEDYIRVPRNI-KSLYD 120

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVA 427
           +++ +VACG  H+  +S    ++++G   +G LG G+ ++  S P+ ++SL G+    +A
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            G  H+ A+            + G +F WG    G+LG  D   +  P  +  L     +
Sbjct: 181 AGGGHSFAL-----------TMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKII 229

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISS 543
              CG   T  LT  G V+T G+  +GQLG    N +   R +  + G +    V  I+ 
Sbjct: 230 HICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI----VTQIAC 285

Query: 544 GSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           G  H +A + S G +Y++G   NGQLG G +  R++P  V+       + V         
Sbjct: 286 GRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANGC 345

Query: 603 ICLHKSISVGDQS-----SCSQCRMPFGFRRKKHNC 633
            C+ +  S GDQS     +   C  P  F   K NC
Sbjct: 346 YCVKRIYSGGDQSFAHYFTIQHCLPPDDF--TKCNC 379



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 23/246 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG         G +  SV+++  +V    P+ ++S   + +  ++ G  H+  ++KE
Sbjct: 89  VFSWGHAA-----HGQIGLSVAEDYIRV----PRNIKSLYDIQIVQVACGHHHSLALSKE 139

Query: 281 GEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            +++ WG+ + G+LG    +   S P+ ++ L+GI    ++ G   + ALT SG I+ WG
Sbjct: 140 SDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWG 199

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   + +   RS      L  +L   ++  + CGE HTA ++  G +FT+G G +G
Sbjct: 200 RNKFGQLGLNDETDRS---APALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYG 256

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGH +  +   P++V  L G  V  +ACG  HT A V             G+++++G  
Sbjct: 257 QLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFV----------PSSGRIYSFGLG 306

Query: 460 DKGRLG 465
             G+LG
Sbjct: 307 GNGQLG 312



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 3/154 (1%)

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
           +D E  L P      ++ +     CG   TV +   G VYT G    GQLG+ K++ +  
Sbjct: 1   IDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKPD 60

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEAL 585
            V  G L  + +  +S G  H   L   G V++WG  A+GQ+GL  +++    P  +++L
Sbjct: 61  QV--GALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSL 118

Query: 586 RDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            D Q+  V CG   + A+     I    Q+   Q
Sbjct: 119 YDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQ 152


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/252 (36%), Positives = 140/252 (55%), Gaps = 20/252 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+E    + V +I+ G+ H+A +T  G V  WG+G+ GRLGH  + D   PKLVE L 
Sbjct: 10  PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL 69

Query: 313 GINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           G     ++C  G+ QT  +T    +++WG  ++G   +G   S    LP K+ ++L G+ 
Sbjct: 70  GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGK--LGRGGSDGCKLPYKI-ESLAGLG 126

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V KV CG   +  ++ SG ++T+G G F  LGHG++ +V +PK+V +L+G K+ S+A G 
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 186

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQ 488
            H  A  D            G+++TWGD D+G+LG  DG    +  P  VT L     V+
Sbjct: 187 LHCVACSD-----------SGEVYTWGDNDEGQLG--DGTVTAIQWPRLVTALQGKHIVK 233

Query: 489 ASCGRMLTVGLT 500
            +CG   T+ L+
Sbjct: 234 VTCGSAHTLALS 245



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
           KL + L+G+ V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++  +PK VE+L G
Sbjct: 11  KLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLG 70

Query: 421 LKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            +   +ACG     T  I D              +++WGD D G+LG    +   LP  +
Sbjct: 71  YRAIDIACGSGDAQTLCITD-----------DDNVWSWGDGDYGKLGRGGSDGCKLPYKI 119

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLK 534
             L     V+  CG   +V LT  G VYT G     +LG+       + + +  ++GK  
Sbjct: 120 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK- 178

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
              +  I++GS H    +  G VYTWG N  GQLG G     + P  V AL+ + +  V 
Sbjct: 179 ---IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVT 235

Query: 595 CGSSITAAI 603
           CGS+ T A+
Sbjct: 236 CGSAHTLAL 244



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 128/266 (48%), Gaps = 28/266 (10%)

Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
           H   M    PKLVE L+G++V  ++CG   + A+T SG + TWG   +G   +G   S  
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR--LGHGDSED 58

Query: 356 HWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
              P KL + L G R   +AC  G+  T  ++    ++++GDG +G LG G       P 
Sbjct: 59  QLRP-KLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGER 471
           ++ESL GL V  V CG   + A+        KS A+    +TWG  D  RLGH  VD  R
Sbjct: 118 KIESLAGLGVVKVECGSQFSVALT-------KSGAV----YTWGKGDFHRLGHGSVDHVR 166

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK----DRSIT 527
           +  P  V  L     +  + G +  V  +  G+VYT G    GQLG+         R +T
Sbjct: 167 R--PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVT 224

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTS 553
            ++GK     VK ++ GS H   L++
Sbjct: 225 ALQGK---HIVK-VTCGSAHTLALST 246



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 93  NVWSWGDGDYGKLGRGGSDG----------CKLPYKIESLAGLGVVKVECGSQFSVALTK 142

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 143 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 202

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 203 DNDEGQ--LGDGTVTAIQWPR-LVTALQGKHIVKVTCGSAHTLALSTS 247



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 12/118 (10%)

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           GN  + DR   +VE  L    V  I+ GS H A +T+ G V TWGK   G+LG GDS+++
Sbjct: 2   GNRMSYDRP-KLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----GDQSSCSQ-----CRMPF 624
             P  VEAL   +   + CGS     +C+    +V     GD     +     C++P+
Sbjct: 60  LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 183/410 (44%), Gaps = 31/410 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +  G   +G   +  +  +PR +  +L  +++ ++ACG +H+  +S   ++F++G    G
Sbjct: 111 DTDGQ--LGLPGTEEYIRVPRNI-KSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  L+  S P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS----SCSQCRMP 623
           +P  V+          +  S      C+ +  S GDQS    SC Q   P
Sbjct: 337 SPFTVKGNWFPYSGKCLPESDGEEFFCVKRIFSGGDQSFSHYSCPQGLGP 386


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 183/410 (44%), Gaps = 31/410 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +  G   +G   +  +  +PR +  +L  +++ ++ACG +H+  +S   ++F++G    G
Sbjct: 111 DTDGQ--LGLPGTEEYIRVPRNI-KSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  L+  S P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS----SCSQCRMP 623
           +P  V+          +  S      C+ +  S GDQS    SC Q   P
Sbjct: 337 SPFTVKGNWFPYSGKCLPESDGEEFFCVKRIFSGGDQSFSHYSCPQGLGP 386


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 183/410 (44%), Gaps = 31/410 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +  G   +G   +  +  +PR +  +L  +++ ++ACG +H+  +S   ++F++G    G
Sbjct: 111 DTDGQ--LGLPGTEEYIRVPRNI-KSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G  L+  S P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS----SCSQCRMP 623
           +P  V+          +  S      C+ +  S GDQS    SC Q   P
Sbjct: 337 SPFTVKGNWFPYSGKCLPESDGEEFFCVKRIFSGGDQSFSHYSCPQGLGP 386


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 161/330 (48%), Gaps = 27/330 (8%)

Query: 283 VFCWGEGKDGRLG--HKVNMDVSCPKLVECLS-GINVQSVSCGEFQTCALTKSGEIYTWG 339
           +FCWG+  +G+LG        +S P+L+E L    NV+ VSCG   T  L K G +YT G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   +G+ +S ++  P  +   ++   ++KV CG+ HT  VS  G +F +GD ++G
Sbjct: 61  SNEFGQ--LGQEKSHTN--PESV-HAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYG 115

Query: 400 VLGHGN-----LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            +G G+     +Q +  PK ++ L  + V  +ACG  H+ A+            I G LF
Sbjct: 116 QIGLGSKVKEKVQTI--PKMLKGLAKMSVVQIACGCNHSMAL-----------TISGHLF 162

Query: 455 TWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            WGD   G+LG       +  P  V  L    F+  S G   +  L+  G ++  G   +
Sbjct: 163 CWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEY 222

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG     DR +  +   L+ + V  +S G  H AVLTS G V+T+G   +GQLG   +
Sbjct: 223 GQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSN 282

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
               TP  V  L    V  + CG + T A+
Sbjct: 283 HHEYTPRKVFELMGSVVTQIACGRAHTLAL 312



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 188/390 (48%), Gaps = 33/390 (8%)

Query: 253 PKLLESAVML-DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           P+LLE+     +V+ +S G  H A + K+G V+  G  + G+LG + +   + P+ V  +
Sbjct: 25  PRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKSH--TNPESVHAI 82

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER-RSRSHWLPRKLFDTLDGVR 370
               +  V+CG+  T A++  G ++ WG N++G   +G + + +   +P K+   L  + 
Sbjct: 83  ETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIP-KMLKGLAKMS 141

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACG 429
           V ++ACG  H+  ++ SG LF +GD + G LG G   + +S+P  V SL G+    ++ G
Sbjct: 142 VVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAG 201

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             H+ A+           +  G LF WG  + G+LG  D   + LPT +  L        
Sbjct: 202 GAHSFAL-----------SSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYV 250

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           SCG   T  LT  G V+T G    GQLG+             +L    V  I+ G  H +
Sbjct: 251 SCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTL 310

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA--LRDRQVESVVC---GSSITAAI 603
           A++ S G VYT+G+  +GQLGLG +    +P   +   LR   ++S++    G S+   +
Sbjct: 311 ALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYTV 370

Query: 604 ---------CLHKSISVGDQSSCSQ-CRMP 623
                    C   + S GD++   +  R+P
Sbjct: 371 RRIDAGGDHCFAMASSYGDETDGPEDMRLP 400



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 21/246 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+   G  IG    GS  + K Q    +PK+L+    + V  I+ G  H+  +T  
Sbjct: 106 VFAWGDNSYG-QIGL---GSKVKEKVQT---IPKMLKGLAKMSVVQIACGCNHSMALTIS 158

Query: 281 GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G +FCWG+   G+LG  K +  +S P  V  L+G+    +S G   + AL+ SG ++ WG
Sbjct: 159 GHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWG 218

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N +G   +G   +    LP  L  +L    V  V+CGE HTA++++ G +FT+G GT G
Sbjct: 219 KNEYGQ--LGVHDTTDRPLP-TLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSG 275

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGH +  +   P++V  L G  V  +ACG  HT A+V             G+++T+G  
Sbjct: 276 QLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALV----------PSSGRVYTFGRG 325

Query: 460 DKGRLG 465
             G+LG
Sbjct: 326 GDGQLG 331


>gi|307105210|gb|EFN53460.1| hypothetical protein CHLNCDRAFT_136724 [Chlorella variabilis]
          Length = 1660

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/189 (42%), Positives = 111/189 (58%), Gaps = 13/189 (6%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVEC 310
           LP L      LDV   ++G KHAALVT  G V+CWGEG+ G+LG   + D + P ++   
Sbjct: 231 LPGLAPGGGHLDVYRAAVGRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHG 290

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWG--HNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           L G    +V+CG+  T ALT  GE++ WG  H +          SR   +P ++   L G
Sbjct: 291 LQGQCAVAVACGDDCTAALTDGGELFMWGRLHVD----------SRPQLVPLQVRGDLRG 340

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            +V +V+CG +H A VS+ GQLFT+G+G  G LGHG+  N + P  V +L G +V  VAC
Sbjct: 341 RKVVQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEVAC 400

Query: 429 GPWHTAAIV 437
           G WH+AAIV
Sbjct: 401 GVWHSAAIV 409



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 160/388 (41%), Gaps = 58/388 (14%)

Query: 6   LIWYSGQKE-KQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGE---RSLDLI 61
           L W S     KQ++L +V++++ GQ T  F+  P  +    SFS+ Y   +   R+LDL 
Sbjct: 70  LKWRSASGSVKQVKLRNVSEVVAGQATEVFRRYPLRE-GAGSFSLRYRAEDGTSRTLDLT 128

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKHNLGLLEDAT 121
             D+ Q E WF GLR   +  +   T        G      SPA   R    +G+     
Sbjct: 129 ATDEQQFELWFTGLRVVAARLQALGTPVAALPPSGPGGL--SPAELAR---CVGI----- 178

Query: 122 ELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHMETEN 181
              +++   G   + + ER   D L++ S       S S  ++++  ++     H     
Sbjct: 179 ---RMQEASGPVCVPVPERTPCDLLAWGSAQRAPPVSMS--LRSVMGVVEDCWQHRSLPG 233

Query: 182 FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
                 +    R      H  +    G+           V  WGEG  GG +G   D   
Sbjct: 234 LAPGGGHLDVYRAAVGRKHAALVTATGA-----------VYCWGEG-RGGKLGLGHD--- 278

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            Q++ Q   +   L     +     ++ G    A +T  GE+F WG         ++++D
Sbjct: 279 -QDQAQPLRIRHGLQGQCAVA----VACGDDCTAALTDGGELFMWG---------RLHVD 324

Query: 302 VSCPKLVEC-----LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
            S P+LV       L G  V  VSCG F   A++  G+++TWG    G    G++ +R+H
Sbjct: 325 -SRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAH 383

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIV 384
                L   L G +V +VACG WH+A +
Sbjct: 384 ---PSLVHALAGRQVLEVACGVWHSAAI 408



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 37/195 (18%)

Query: 447 NAIGGKLFTWG--------------DADKGRLGHVDGE---RKLLPTCVTRLVDFDFVQ- 488
           + + G L+TWG              D++KG LGH DG+    +LLPT V   ++   V+ 
Sbjct: 483 DGVSGALYTWGAVSESVAFGASEKRDSNKGCLGHGDGDLYRGQLLPTRVGGALEARQVRH 542

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSG 544
            + G  LTV +T  G+V+ MG+   G  G     P        +V G L+  FV  +  G
Sbjct: 543 VAAGSHLTVAVTTGGRVFQMGAT--GASGPARHCPWEGATLPELVRGALQGYFVDELCCG 600

Query: 545 SYHVAVLT-------------SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            +H A                +  + + WG+ + GQLG+    +   P  VE L+ R V 
Sbjct: 601 MHHAAATGRPLDRKLGRPADHAPRAAFAWGRGSEGQLGVKGFDDSTAPVLVEGLKGRHVL 660

Query: 592 SVVCGSSITAAICLH 606
            V CG S + A+C H
Sbjct: 661 QVACGGSNSLAVCEH 675



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMG 509
           G ++ WG+   G+LG    + +  P  +   +     V  +CG   T  LT  G+++  G
Sbjct: 260 GAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACGDDCTAALTDGGELFMWG 319

Query: 510 SAVHGQLGNPKAKDRSITV---VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             +H          R   V   V G L+   V  +S G +H A ++S G ++TWG+   G
Sbjct: 320 R-LH-------VDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGFGG 371

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +LG GD   R  P+ V AL  RQV  V CG   +AAI
Sbjct: 372 KLGHGDQANRAHPSLVHALAGRQVLEVACGVWHSAAI 408



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 253 PKLLESAVMLDVQN-----ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
           P+L+   V  D++      +S G  H A V+ +G++F WGEG  G+LGH    + + P L
Sbjct: 327 PQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSL 386

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGE 334
           V  L+G  V  V+CG + + A+    E
Sbjct: 387 VHALAGRQVLEVACGVWHSAAIVSEPE 413



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 953  QKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFTEKAAERWWEENQVVVY 1012
            Q G+ A+  E+ E++E G+++TFT+  +G K L+R+RF+R  F+  +A++W+E N+  + 
Sbjct: 1248 QPGSPAAADEWTEEFEEGVFLTFTS-EAGAKKLRRIRFNRSLFSATSAKQWYEVNKHRLA 1306

Query: 1013 QKYGI 1017
            Q  G 
Sbjct: 1307 QPTGT 1311



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV-EALRDRQVESVVCGSSITAA 602
           G  H A++T+ G+VY WG+   G+LGLG  Q++  P  +   L+ +   +V CG   TAA
Sbjct: 249 GRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACGDDCTAA 308

Query: 603 IC------LHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACST 646
           +       +   + V  +      ++    R +K    +CG   C+A S+
Sbjct: 309 LTDGGELFMWGRLHVDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSS 358



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 26/153 (16%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH--W----LPRKLF 363
            L    V+ V+ G   T A+T  G ++  G         G      H  W    LP  + 
Sbjct: 534 ALEARQVRHVAAGSHLTVAVTTGGRVFQMG-------ATGASGPARHCPWEGATLPELVR 586

Query: 364 DTLDGVRVSKVACGEWHTAIVS-------------TSGQLFTYGDGTFGVLGHGNLQNVS 410
             L G  V ++ CG  H A                     F +G G+ G LG     + +
Sbjct: 587 GALQGYFVDELCCGMHHAAATGRPLDRKLGRPADHAPRAAFAWGRGSEGQLGVKGFDDST 646

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            P  VE L+G  V  VACG  ++ A+ +  V R
Sbjct: 647 APVLVEGLKGRHVLQVACGGSNSLAVCEHDVRR 679


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 170/354 (48%), Gaps = 42/354 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVF----CWGEGKDGRLGHKVNMDVSCPKLV 308
           P+ + S    DV +++ GA+H+  VT  GEV+    C GEGK      ++   V  P  V
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258

Query: 309 ECLSGI--NVQSVSCGEFQTCALTKSGEIYTWGHNNHG---------------ADLVGER 351
              +     V +V+CG+    A+T SG + +WG+   G               A  +  R
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRR 318

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
           R+ +  +PR +      V+ + VACG  HT  ++ +G++F++G G FG LGHG+  N   
Sbjct: 319 RADASMMPRLVGS--GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV 376

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
           P+ V++L G+ V  +A G  H+A++           +  G+++TWG    G LGH D + 
Sbjct: 377 PRLVDALWGVGVAQIAAGDNHSASL-----------SASGRVYTWGRGKYGALGHRDVDN 425

Query: 472 KLLPTCVTRLVDFDF--VQASCG--RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSI 526
           +  PT V  L D      Q +CG    L +   G G +   G    G  G     D  + 
Sbjct: 426 RSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTP 485

Query: 527 TVVE-GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG--LGDSQERE 577
           T+++   L +E V  IS+GS H   +T GG VYTWG    GQLG  LGD+   E
Sbjct: 486 TIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGHELGDAGTSE 539



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 36/324 (11%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH-NNHGADLVGERRSRSHWL-PRKL 362
           P+ V  L G +V  V+ G   + A+T +GE+Y +G  +  G  L    R R   + P ++
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258

Query: 363 FDTLDGV-RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--- 418
             T + + RV+ VACG+ H A V+TSG L ++G+  FG LG G  ++ S   + +SL   
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRR 318

Query: 419 -------------RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
                          +K  SVACG  HT A+              G++F++G    G LG
Sbjct: 319 RADASMMPRLVGSGHVKFTSVACGAGHTLALT-----------ANGRVFSFGRGAFGALG 367

Query: 466 HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
           H D     +P  V  L      Q + G   +  L+  G+VYT G   +G LG+    +RS
Sbjct: 368 HGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRS 427

Query: 526 ITVVEGKLKEEFVK--GISSGSYHVAVLTSGGS--VYTWGKNANGQLGLGDSQERETPTF 581
                  L +  V+   I+ G  H   +  GGS  +  WG+ ++G  G G + +  TPT 
Sbjct: 428 RPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTI 487

Query: 582 VE--ALRDRQVESVVCGSSITAAI 603
           ++   L D +V  +  GS  + A+
Sbjct: 488 IDRALLGDEKVFQISAGSKHSVAV 511



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 21/227 (9%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
           +++P+L+ S   +   +++ GA H   +T  G VF +G G  G LGH   ++   P+LV+
Sbjct: 323 SMMPRLVGSG-HVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVD 381

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER--RSRSHWLPRKLFDTLD 367
            L G+ V  ++ G+  + +L+ SG +YTWG   +GA  +G R   +RS   P +  D   
Sbjct: 382 ALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGA--LGHRDVDNRSRPTPVQALDDA- 438

Query: 368 GVRVSKVACGEWHTAIVS--TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES--LRGLKV 423
           GVR  ++ACG  HT  ++   SG L  +G G+ G  G G   +V  P  ++   L   KV
Sbjct: 439 GVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKV 498

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
             ++ G  H+ A+ +           GG ++TWG   +G+LGH  G+
Sbjct: 499 FQISAGSKHSVAVTE-----------GGCVYTWGARTQGQLGHELGD 534



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 124/274 (45%), Gaps = 44/274 (16%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL--------QNVS 410
           PR +  +LDG  V+ VA G  H+  V+++G+++ +GD +    G G          + V 
Sbjct: 199 PRSV-SSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCS----GEGKALSAPTRLREAVI 253

Query: 411 QPKEVESLRGL--KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-- 466
            P EV +      +V +VACG  H AA+              G L +WG+ + G+LG   
Sbjct: 254 DPPEVTATTNAMPRVATVACGQRHCAAVT-----------TSGVLLSWGNEEFGQLGQGP 302

Query: 467 -----VDGERKLL------PTCVTRLVD---FDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
                  G+ K L       + + RLV      F   +CG   T+ LT  G+V++ G   
Sbjct: 303 PRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGA 362

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            G LG+    +  +  +   L    V  I++G  H A L++ G VYTWG+   G LG  D
Sbjct: 363 FGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRD 422

Query: 573 SQERETPTFVEALRDRQV--ESVVCGSSITAAIC 604
              R  PT V+AL D  V  E + CG   T AI 
Sbjct: 423 VDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIA 456


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 181/399 (45%), Gaps = 29/399 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+     V   VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEI--------VLEPRRCSFFVNKKVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGF 110

Query: 341 NNHG-ADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
              G   L G E  +R   +PR +  +L  +++ +VACG +H+  +S   ++F++G   +
Sbjct: 111 AVDGQLGLSGTEEYTR---VPRNI-KSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKY 166

Query: 399 GVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG G   +  + P+ ++SL G+    +A G  H+  +            + G +F WG
Sbjct: 167 GQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVL-----------TLSGAVFGWG 215

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG  D   + +P  +  L     V  SCG   T  LT  G V+T G+  +GQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +             +L    V  I+ G  H  A + S G +Y++G   NGQLG+G +  R
Sbjct: 276 HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNR 335

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
           ++P  V+         +   S      C+ +  S GDQS
Sbjct: 336 KSPFPVKGNWLPYNGQIPLNSDGEDYYCVKRIFSGGDQS 374


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 187/427 (43%), Gaps = 70/427 (16%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G           G +++    +  L+P    S      Q +  G     ++  
Sbjct: 1123 DVFLWGAGR---------HGQLAEAGRNI--LVPTTAPS--FSQAQQVVCGQNCTFVIQP 1169

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV--SCG-EFQTCALTKSGEIY 336
             G V   GEG  GRLG   + D+    ++  L G  V  +  SCG +  + ALT+SGE++
Sbjct: 1170 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1229

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV---------------------- 374
            +WG  ++G   +G   S     PR++ + L G  V +V                      
Sbjct: 1230 SWGDGDYGK--LGHGNSDRQRRPRQI-EALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQ 1286

Query: 375  -ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL---KVKSVACGP 430
             +CG  H+A+V+  G+LFT+G+G +G LG GN  N   P+ V +L G    +V +VACG 
Sbjct: 1287 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGL 1346

Query: 431  WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC------------- 477
             HT  +          +A G  ++ +GD D G+LG  +   K  P               
Sbjct: 1347 NHTLVV----------SADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQE 1396

Query: 478  --VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
              V  L      + +CG   +V LT  G+V+T G      L   +A++ +       L  
Sbjct: 1397 LKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSG 1456

Query: 536  EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
              V+ ++ G+ H   L+S G VY WG N+ GQLGLG +     PT V  L+ + +  V  
Sbjct: 1457 VHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSA 1516

Query: 596  GSSITAA 602
            G   +AA
Sbjct: 1517 GRCHSAA 1523



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 10/162 (6%)

Query: 449  IGGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +GGK  +F WG    G+L    G   L+PT           Q  CG+  T  +   G V 
Sbjct: 1118 LGGKCDVFLWGAGRHGQLAEA-GRNILVPTTAPSFSQAQ--QVVCGQNCTFVIQPNGTVL 1174

Query: 507  TMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
              G   +G+LG   + D      I+ ++G +  + V    S  + +A LT  G V++WG 
Sbjct: 1175 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMA-LTESGEVFSWGD 1233

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
               G+LG G+S  +  P  +EAL+  +V  V  G +  A +C
Sbjct: 1234 GDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLC 1275



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+ L +   + VQ++++GA+H   ++  G+V+ WG   +G+LG      V  P +V  L 
Sbjct: 1448 PQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQ 1507

Query: 313  GINVQSVSCGEFQTCALT 330
            G ++  VS G   + A T
Sbjct: 1508 GKHIHQVSAGRCHSAAWT 1525


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 184/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +         C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 180/386 (46%), Gaps = 45/386 (11%)

Query: 246 TQVDALLPK---LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVN-M 300
           +Q D  LPK   +    +    + IS G+ H+A+VTK GE++  G    G+LG   VN M
Sbjct: 183 SQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGM 242

Query: 301 DVSCPKLVECLSGINV----QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
            VS    V    GI V    + V+CG++ T  L + G+++ WG   H    VGE+ +++ 
Sbjct: 243 HVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQVFAWGGTLHKK--VGEKNAQAQ 300

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG----TFGVLGHGNLQNVSQP 412
               ++   L G ++  + CG++H+  +   G+++++G G      G  GHGN +++ QP
Sbjct: 301 NNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQP 360

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
            +V+ +   K+  ++ G +HT A+       C+ +    +L+ WG    G  G  + +  
Sbjct: 361 IQVQGIAHRKIVQISAGGFHTLAL-------CEED---NELYAWGSGTYGECGLGEFQAS 410

Query: 473 LLPTCVTRLVDF-----------DFV---------QASCGRMLTVGLTGLGKVYTMGSAV 512
             P  V    DF           +F          Q S G   T+ LT  G+VY+ G   
Sbjct: 411 SKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGS 470

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           HGQLG    K+     +   L  + +K I++G  H  +L+  G ++  G   +GQLGL D
Sbjct: 471 HGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWNHSLILSDKGDLFACGYGNHGQLGLND 530

Query: 573 SQERETPTFVEALRDRQVESVVCGSS 598
            + R   T V  L  +   ++  G +
Sbjct: 531 KEPRTQFTHVANLGGKNAYNIYAGGN 556



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 171/367 (46%), Gaps = 47/367 (12%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS---GINVQSV 319
           +++NIS  AK   + TK+  ++ +G+  DG LG     D   PK +   +       + +
Sbjct: 150 NLENISEIAK--EIKTKKAYIWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYI 207

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS----KVA 375
           S G   +  +TK+GE+Y  G   HG  L  +  +  H          DG++V+    +VA
Sbjct: 208 SSGSHHSAIVTKAGELYVSGSQLHGK-LGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVA 266

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTA 434
           CG++HT  +   GQ+F +G      +G  N Q   ++P+ V  L+G ++  + CG +H+ 
Sbjct: 267 CGDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSV 326

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDA----DKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
           A+            I G++++WG      +KG+ GH + E    P  V  +     VQ S
Sbjct: 327 AL-----------DIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQIS 375

Query: 491 CGRMLTVGL-TGLGKVYTMGSAVHGQLG--------NPK----AKDRSITVVEGKLKEEF 537
            G   T+ L     ++Y  GS  +G+ G         PK     KD        +++ EF
Sbjct: 376 AGGFHTLALCEEDNELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEF 435

Query: 538 --------VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
                   +  IS+G +H  +LTS G VY++G  ++GQLGL  ++   +P  V+ L  + 
Sbjct: 436 AFSSQKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKN 495

Query: 590 VESVVCG 596
           ++++  G
Sbjct: 496 IKAIAAG 502



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 33/270 (12%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEG---- 289
           GG +   V +   Q     P+++       + +I  G  H+  +  +G V+ WG G    
Sbjct: 285 GGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGASY 344

Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEIYTWGHNNHGADLV 348
             G+ GH  N D+  P  V+ ++   +  +S G F T AL  +  E+Y WG   +G   +
Sbjct: 345 NKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYGECGL 404

Query: 349 GERRSRSH----WLPRKLFDTLDGVR-------------VSKVACGEWHTAIVSTSGQLF 391
           GE ++ S      +P+      +  +             +++++ G  HT ++++ G+++
Sbjct: 405 GEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVY 464

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           ++G G+ G LG  + +N   P+ V+ L    +K++A G  H+  + D            G
Sbjct: 465 SFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWNHSLILSD-----------KG 513

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            LF  G  + G+LG  D E +   T V  L
Sbjct: 514 DLFACGYGNHGQLGLNDKEPRTQFTHVANL 543



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 31/239 (12%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV----KSVACGPWHTAAIVD 438
           I +    ++++G  + G LG  + ++   PK + S++ LK+    K ++ G  H+A +  
Sbjct: 161 IKTKKAYIWSFGKNSDGELGISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSAIVTK 219

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-------QASC 491
                       G+L+  G    G+LG +     +  +  T++  FD +       Q +C
Sbjct: 220 -----------AGELYVSGSQLHGKLG-IQSVNGMHVSKFTQVTMFDGIKVNQKVKQVAC 267

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           G   T+ L   G+V+  G  +H ++G  N +A++    +V G   ++ V  I  G +H  
Sbjct: 268 GDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVH-IDCGDFHSV 326

Query: 550 VLTSGGSVYTWGKNA----NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            L   G VY+WG        GQ G G++++ E P  V+ +  R++  +  G   T A+C
Sbjct: 327 ALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALC 385


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S  G+ F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKG--NWFPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 184/405 (45%), Gaps = 31/405 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSCSQC 620
           +P  V+   +    +  C   I +    C+ +  S GDQS    C
Sbjct: 337 SPFTVKG--NWLPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYC 379


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 169/344 (49%), Gaps = 31/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFENVLQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG G+ ++   P  +E L   KV+ VACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV +   Q +CG
Sbjct: 255 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ + +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIM 363

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 364 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 403



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ V+CG   +  LT+ G ++T+G   HG  
Sbjct: 216 GKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 332

Query: 406 LQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  +  P +V S   LK++S      HT+    IM+
Sbjct: 333 TRDQLMPLPVKVSSSEELKLES------HTSEKELIMI 364



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y + +   + H   +NV Q K        K+  + C
Sbjct: 97  MKIHSVDQGAEHMLILSSDGKPFEYDNYS---MKHLRFENVLQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G +Y+ G    GQLG  + ++KD   +++EG L  + V+ ++
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-SLIEG-LDNQKVEFVA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 178/369 (48%), Gaps = 27/369 (7%)

Query: 219 KDVMIWGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           KD+  WG  + G   +GG  D ++         L+P+ L+     ++Q I+ G  +  ++
Sbjct: 26  KDMFCWGSTIHGELGLGGIEDENI---------LIPRELDFKKAAEIQQIACGENYTVVI 76

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T+ GE++  G    G+LGH+        +L+  L     +  +CG + T A+ + G++++
Sbjct: 77  TQIGEIYSCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKAACGAYHTLAINEWGQLFS 134

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N  G   +G           ++  TL    V ++ACG  H   ++ +G+L+++G  +
Sbjct: 135 WGSNTEGQ--LGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNS 192

Query: 398 FGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LG G +++   +PK + +  G+ +  +ACG +H+ AI           +  G +F W
Sbjct: 193 EGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAI-----------SKSGAVFGW 241

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G    G+LG  D + + LP  +  L +     A+CG   +V LT  G V+T G+ ++GQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G+    +  +     +L    V  IS G  H +A++ S G VY WG    GQLG   ++ 
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361

Query: 576 RETPTFVEA 584
             TP  V  
Sbjct: 362 VTTPQVVHG 370



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 154/330 (46%), Gaps = 22/330 (6%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           K+ ++FCWG    G LG     D  +  P+ ++      +Q ++CGE  T  +T+ GEIY
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           + G+N++G   +G  + R      +L   LD     K ACG +HT  ++  GQLF++G  
Sbjct: 84  SCGNNDYGQ--LGHEKGRKR---LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSN 138

Query: 397 TFGVLGHGNLQNV--SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           T G LG  N +N   S P+ V++L    V  +ACG  H  A+ +            G+L+
Sbjct: 139 TEGQLGL-NSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN-----------NGELY 186

Query: 455 TWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +WG   +G+LG   D + ++ P  ++  +       +CG   ++ ++  G V+  G    
Sbjct: 187 SWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTF 246

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG    +DR++      L+   +   + G      LT  G V+T G    GQLG G +
Sbjct: 247 GQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSN 306

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
                P  V  L    V  + CG   T A+
Sbjct: 307 SNEILPRQVMELMGSTVTQISCGKRHTLAL 336



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 143/290 (49%), Gaps = 38/290 (13%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           L K  +++ WG   HG   +G     +  +PR+L D      + ++ACGE +T +++  G
Sbjct: 22  LHKKKDMFCWGSTIHGELGLGGIEDENILIPREL-DFKKAAEIQQIACGENYTVVITQIG 80

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           ++++ G+  +G LGH   +   + + +  L     K  ACG +HT AI +          
Sbjct: 81  EIYSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKAACGAYHTLAINE---------- 128

Query: 449 IGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             G+LF+WG   +G+LG      ++   +++ T  T +V    VQ +CG      LT  G
Sbjct: 129 -WGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVV----VQIACGMKHAFALTNNG 183

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG--------ISSGSYHVAVLTSGG 555
           ++Y+ GS   GQLG         T ++ ++K +F+          I+ G YH   ++  G
Sbjct: 184 ELYSWGSNSEGQLGLG-------TDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSG 236

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           +V+ WGKN  GQLGL D+Q+R  P  ++ L++ ++    CG   +  + +
Sbjct: 237 AVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 184/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +         C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 184/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +         C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 184/405 (45%), Gaps = 31/405 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSCSQC 620
           +P  V+   +    +  C   I +    C+ +  S GDQS    C
Sbjct: 337 SPFTVKG--NWLPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYC 379


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         ++++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RIRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYAYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 34/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G   Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFRR 628
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FRR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 171/340 (50%), Gaps = 39/340 (11%)

Query: 283 VFCWGEGKDGRLG---HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           V+  G G  GRLG    +     + P  +  L  + V+S++CG      L+++G++Y+WG
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGP--LGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG 63

Query: 340 HNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +N+     HG +        S W PR +   L+ V+V ++A GE H+  ++   ++FT+G
Sbjct: 64  YNDSRQTGHGVE------DLSDWEPRWI-RALETVKVVQIAAGEDHSVALTDRSEVFTWG 116

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            G  G LGHG++ +V  P  V+ L+G  +KS+ CG  +T AI              GK+ 
Sbjct: 117 RGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGT-----------GKVL 165

Query: 455 TWGDADKGRLGHVD-----GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            +G A  G+LG+ D     G    LP  +  L  F  +QA+ G+  ++ L+  G++Y++G
Sbjct: 166 GFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVG 225

Query: 510 SAVHGQLGNPKAKDRSI------TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            A +GQLG P  +  S+      T+ E   K  FVK +S G  H   L+  G VY+WG  
Sbjct: 226 YAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSG 285

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            N  LG G +++  TP  V  L      SV  G   +AA+
Sbjct: 286 INWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 165/342 (48%), Gaps = 28/342 (8%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC--PKLVECLSGINVQSV 319
           ++V++++ G KH  L+++ G+V+ WG     + GH V  D+S   P+ +  L  + V  +
Sbjct: 38  VEVKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVE-DLSDWEPRWIRALETVKVVQI 96

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           + GE  + ALT   E++TWG   HG   +G       W P  L   L G  +  + CG  
Sbjct: 97  AAGEDHSVALTDRSEVFTWGRGLHGQ--LGHGDVSDVWFPF-LVKGLQGKGIKSIGCGYE 153

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTA 434
           +T  ++ +G++  +G    G LG+G++      NV  P +++SL    +     G   + 
Sbjct: 154 NTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSM 213

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLP-TCVTRLVDFD--FVQ- 488
            +              G+L++ G A  G+LG    + E   LP T   + V     FV+ 
Sbjct: 214 FLSHT-----------GQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKY 262

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            SCG   ++ L+  G VY+ GS ++  LG+   +D     +   L+ +    +S+G YH 
Sbjct: 263 VSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHS 322

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
           A +++ G +YTWG+N  GQLG G + +  +   V+ L  R +
Sbjct: 323 AAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVI 364



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 25/282 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ + +   + V  I+ G  H+  +T   EVF WG G  G+LGH    DV  P LV+ L 
Sbjct: 82  PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQ 141

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRKLFDTLDG 368
           G  ++S+ CG   T A+T +G++  +G    G     D+ G      + LP +L  +L  
Sbjct: 142 GKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVY-LPVQL-KSLAK 199

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-------HGNLQNVSQPKEVESLRGL 421
             + +   G+  +  +S +GQL++ G    G LG         NL      +EV S +G+
Sbjct: 200 FTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEV-SHKGV 258

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            VK V+CG  H+ A+ +            G +++WG      LGH   E    P  V  L
Sbjct: 259 FVKYVSCGDSHSLALSE-----------DGIVYSWGSGINWALGHGGTEDTFTPKMVAML 307

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
                V  S G   +  ++  G++YT G    GQLG  +  D
Sbjct: 308 EADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNID 349


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 163/316 (51%), Gaps = 19/316 (6%)

Query: 267 ISLGAKHA-ALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           +S GA H+ AL+T  G V C WG G+DG+LGH    D   P ++       + SV CG  
Sbjct: 18  VSAGASHSVALLT--GNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGAD 75

Query: 325 QTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
            T A ++   ++Y+WG  + G   +G   S   + P+ +   L G+++ ++ACG+ H   
Sbjct: 76  HTTAYSEDELQVYSWGWGDFGR--LGHGNSSDVFTPQPV-KALQGLKIKQIACGDSHCLA 132

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           V+ +G++ ++G    G LG G  ++   P+++++   + VK +A G  HTAA+ +     
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE----- 187

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G L+ WG    G LG  D   +LLP  V+ +     V  +CG   T+ ++  G
Sbjct: 188 ------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSG 241

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +YT G + +GQLG+   +D  +      LK+  +  IS G  H   LTS G +Y WG N
Sbjct: 242 NLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWN 301

Query: 564 ANGQLGLGDSQERETP 579
             GQ+G+G++ +  +P
Sbjct: 302 KFGQVGVGNNDDHSSP 317



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 15/286 (5%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           VS G   + AL     + +WG    G    G+   R   L   +    D   ++ V CG 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDR---LVPTVLSGFDAPAITSVICGA 74

Query: 379 WHTAIVSTSG-QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            HT   S    Q++++G G FG LGHGN  +V  P+ V++L+GLK+K +ACG  H     
Sbjct: 75  DHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH----- 129

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                 C +  + G++ +WG    G+LG    E  LLP  +           + G   T 
Sbjct: 130 ------CLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTA 183

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            +T  G +Y  G   +G LG     DR +      ++ E +  ++ G  H   ++  G++
Sbjct: 184 AVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNL 243

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           YT+G +  GQLG GD ++   P  VEAL+D  +  +  G   T A+
Sbjct: 244 YTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL 289



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 14/217 (6%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D   P+ +++   L ++ I+ G  H   VT  GEV  WG  ++G+LG     D   P+ +
Sbjct: 105 DVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKI 164

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           +    + V+ ++ G   T A+T+ G++Y WG   +G   +G+R  R   LP K+  +++G
Sbjct: 165 QAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL--LPEKV-SSVEG 221

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            ++  VACG  HT  VS SG L+TYG   +G LGHG+ ++   P +VE+L+   +  ++ 
Sbjct: 222 EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISG 281

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           G  HT A+              GKL+ WG    G++G
Sbjct: 282 GWRHTMALTSE-----------GKLYGWGWNKFGQVG 307



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 8/190 (4%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T  D+LLP+ +++   + V+ I+ GA+H A VT++G+++ WG G+ G LG     D   P
Sbjct: 154 TTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP 213

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           + V  + G  +  V+CG   T  ++ SG +YT+G + +G   +G      H +P K+ + 
Sbjct: 214 EKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ--LGHGDFEDHLVPHKV-EA 270

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV-----ESLRG 420
           L    +S+++ G  HT  +++ G+L+ +G   FG +G GN  + S P +V     E+L G
Sbjct: 271 LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPGSENLPG 330

Query: 421 LKVKSVACGP 430
                   GP
Sbjct: 331 CMRMEAHSGP 340



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
           P  T  +V        +   G  L +WG  + G+LGH D E +L+PT ++          
Sbjct: 11  PPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSV 70

Query: 490 SCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            CG   T   +    +VY+ G    G+LG+  + D         L+   +K I+ G  H 
Sbjct: 71  ICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC 130

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             +T  G V +WG+N NGQLGLG +++   P  ++A     V+ +  G+  TAA+
Sbjct: 131 LAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAV 185



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  S G   +V L     + + G    GQLG+  A+DR +  V        +  +  G+ 
Sbjct: 16  VLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGAD 75

Query: 547 HVAVLTSGG-SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           H    +     VY+WG    G+LG G+S +  TP  V+AL+  +++ + CG S   A+ +
Sbjct: 76  HTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTM 135


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 34/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G   Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFRR 628
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FRR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 34/383 (8%)

Query: 210 PLIE-RKDILK--DVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD 263
           P+I+ +K +LK  D+  WG    G LG  +GG  D  +         L+P  ++     +
Sbjct: 19  PVIKGQKSLLKKGDMFCWGNTRHGELG--LGGIEDEII---------LVPCQVDFKKASE 67

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +Q I+ G  +  ++T +G+++  G    G+LGH+        +L+  L     + V+CG 
Sbjct: 68  IQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRL--QLILGLDAFVFKKVACGA 125

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + T A+ + G++++WG N+ G   +G           ++  TL    + +VACG  H   
Sbjct: 126 YHTIAVNEWGQLFSWGSNSEGQ--LGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALA 183

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++ +G+L+++G  + G LG G ++++  +PK + +L G+ +  +ACG +H+ AI      
Sbjct: 184 LTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAI------ 237

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
             KS AI    F WG    G+LG  D + + LP  +  L +     A+CG   +V LT  
Sbjct: 238 -SKSGAI----FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVD 292

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+ ++GQLG+    +  +     +L    V  IS G  H +A++ S G VY WG
Sbjct: 293 GGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWG 352

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
               GQLG   ++   TP  V  
Sbjct: 353 LGGAGQLGNNSTRSIPTPQVVHG 375



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 155/332 (46%), Gaps = 22/332 (6%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           + K+G++FCWG  + G LG     D  +  P  V+      +Q ++CGE  T  +T  G+
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           IY+ G+N++G   +G  R R      +L   LD     KVACG +HT  V+  GQLF++G
Sbjct: 87  IYSCGNNDYGQ--LGHERGRKR---LQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWG 141

Query: 395 DGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
             + G LG  N +N  +  P+ V++L    +  VACG  H  A+ +            G+
Sbjct: 142 SNSEGQLGL-NSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTN-----------NGE 189

Query: 453 LFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           L++WG   +G+LG  VD   ++ P  +  L        +CG   ++ ++  G ++  G  
Sbjct: 190 LYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKN 249

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG    ++R++      L+   +   + G      LT  G V+T G    GQLG G
Sbjct: 250 TFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 309

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +     P  V  L    V  + CG   T A+
Sbjct: 310 SNNNEILPRQVMELMGSTVTQISCGKRHTLAL 341



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 143/288 (49%), Gaps = 32/288 (11%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           +L K G+++ WG+  HG   +G        +P ++ D      + ++ACGE +T +++  
Sbjct: 26  SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQV-DFKKASEIQQIACGENYTVVITHD 84

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G++++ G+  +G LGH   +   + + +  L     K VACG +HT A+ +         
Sbjct: 85  GKIYSCGNNDYGQLGHE--RGRKRLQLILGLDAFVFKKVACGAYHTIAVNE--------- 133

Query: 448 AIGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
              G+LF+WG   +G+LG      ++   +++ T  T ++    VQ +CG    + LT  
Sbjct: 134 --WGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSII----VQVACGMKHALALTNN 187

Query: 503 GKVYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           G++Y+ GS   GQLG       + K + I  + G      +  I+ G YH   ++  G++
Sbjct: 188 GELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVP----IAFIACGGYHSIAISKSGAI 243

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           + WGKN  GQLGL D+Q R  P  ++ LR+ ++    CG   +  + +
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTV 291



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 21/212 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+ +   + +  I+ G  H+  ++K G +F WG+   G+LG     + + P  ++ L 
Sbjct: 213 PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLR 272

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +   +CGE  +  LT  G ++T G   +G   +G   + +  LPR++ + L G  V+
Sbjct: 273 NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ--LGHGSNNNEILPRQVME-LMGSTVT 329

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           +++CG+ HT A+V + G+++ +G G  G LG+ + +++  P+ V             GPW
Sbjct: 330 QISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVH------------GPW 377

Query: 432 ---HTAAIVDI--MVDRCKSNAIGGKLFTWGD 458
              + ++++D+      C    +   +FT GD
Sbjct: 378 VAPNGSSMMDLDKQFSSCTVGYVVKHIFTGGD 409


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         ++++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RIRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYAYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 188/417 (45%), Gaps = 34/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G   Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFRR 628
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FRR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         ++++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RIRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYAYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    S  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWFPYSGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      VQ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG   D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 25/289 (8%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT--- 326
           G +H   +T  G+VF +G    G+LGH     ++ PK VE LS   V +V C  + T   
Sbjct: 74  GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFS 133

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
           CA     EIY+ G N++G   +G    ++      L + L+G R+  + CG++H+ + S 
Sbjct: 134 CA--DEMEIYSCGRNDYGQLGLGNLDDKN---SPTLIEALNGKRIVSIGCGQYHSVVSSI 188

Query: 387 SGQLFTYGDGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++G    G LG  G+  N+S PKEV   + LK   +ACG +HT AI +       
Sbjct: 189 DGEIFSFGRNDSGQLGITGSDGNISLPKEV---KNLKSTQIACGYYHTVAINN------- 238

Query: 446 SNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                G+L++WG  D G+LG  +   +++LPT V  L D + V  +CG   T+ L   G+
Sbjct: 239 -----GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQ 293

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
           +++ G   HGQLG+    +    ++   L ++ V  I++G YH  VL +
Sbjct: 294 LFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLAN 342



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 24/301 (7%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR--------KLFDT 365
           +NV  V+ G   T  LT  G++Y+ G+N  G  L     + S             KL + 
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60

Query: 366 LDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           L G  + K+    G  H   ++ +G++F++G    G LGHG+  +++ PK+VE+L    V
Sbjct: 61  LRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFV 120

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
            +V C  +HT       +  C       ++++ G  D G+LG  + + K  PT +  L  
Sbjct: 121 TAVGCSYYHT-------IFSCADEM---EIYSCGRNDYGQLGLGNLDDKNSPTLIEALNG 170

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              V   CG+  +V  +  G++++ G    GQLG     D +I++ + ++K      I+ 
Sbjct: 171 KRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLG-ITGSDGNISLPK-EVKNLKSTQIAC 228

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
           G YH  V  + G +Y+WGKN +GQLG+G    +E  PT V  L D+++ SV CG   T A
Sbjct: 229 GYYH-TVAINNGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLA 287

Query: 603 I 603
           +
Sbjct: 288 L 288



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 38/353 (10%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDG-----------RLGHKVNMDVSCPKLVEC 310
           ++V  ++ G +H  ++T  G+V+  G  + G           +  +  N      KLVE 
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60

Query: 311 LSGINVQSV--SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           L G N+  +  S G     ALT +G+++++G N  G    G++ S +   P+++ + L  
Sbjct: 61  LRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINS--PKQV-EALSR 117

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTY--GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             V+ V C  +HT I S + ++  Y  G   +G LG GNL + + P  +E+L G ++ S+
Sbjct: 118 KFVTAVGCSYYHT-IFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSI 176

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFD 485
            CG +H+             ++I G++F++G  D G+LG    +  + LP  V  L    
Sbjct: 177 GCGQYHSVV-----------SSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS-- 223

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP--KAKDRSITVVEGKLKEEFVKGISS 543
             Q +CG   TV +   G++Y+ G    GQLG     AK+   T+V   L+++ +  ++ 
Sbjct: 224 -TQIACGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVR-DLEDQEIVSVAC 280

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           G YH   L   G ++++G+N++GQLG G +     P  ++ L D++V  +  G
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG 333



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 7/190 (3%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P L+E+     + +I  G  H+ + + +GE+F +G    G+LG    + ++S PK V+ L
Sbjct: 162 PTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNL 221

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
                  ++CG + T A+  +G++Y+WG N+ G   +G   ++   LP  + D L+   +
Sbjct: 222 KS---TQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAK-EILPTLVRD-LEDQEI 275

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
             VACG +HT  +  +GQLF++G  + G LG G   N  +P  ++ L   KV  +A G +
Sbjct: 276 VSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFY 335

Query: 432 HTAAIVDIMV 441
           H+  + + ++
Sbjct: 336 HSIVLANPVI 345



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 19/137 (13%)

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-----PKAKDRS----------ITV 528
            + +Q + G   T+ LT  G VY+ G   + ++GN     P A  ++          + +
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGG---YNEMGNSLSQGPNAMSQNNNNNNTRTGQLKL 57

Query: 529 VEGKLKEEFVKGISS-GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           VE    +  VK  +S G  HV  LT+ G V+++G N  GQLG GD     +P  VEAL  
Sbjct: 58  VEKLRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSR 117

Query: 588 RQVESVVCGSSITAAIC 604
           + V +V C    T   C
Sbjct: 118 KFVTAVGCSYYHTIFSC 134


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 144/270 (53%), Gaps = 18/270 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM---DVSCPKLVE 309
           P ++ +     +Q +S G  H  +V  + +VF WG    G+LGH +     +   P++V+
Sbjct: 75  PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVK 134

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            LS + +  V+CG   + AL+  G I++WG+N+HG   +G  +++    P++L  +L G+
Sbjct: 135 ELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPK--PQEL-TSLTGI 191

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
              ++  G  H+ ++S SG +F +G  TFG LG G+  +   P  V+SLR LKV  ++CG
Sbjct: 192 PFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCG 251

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HTA +            + G + T+G    G+LGH     + LP  V  L+  +  Q 
Sbjct: 252 EEHTAVL-----------TLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQL 300

Query: 490 SCGRMLTVG-LTGLGKVYTMGSAVHGQLGN 518
           +CGRM T+  +   G++Y+ G   +GQLG+
Sbjct: 301 ACGRMHTMAYVESSGRIYSFGLGGNGQLGS 330



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 151/327 (46%), Gaps = 25/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +FCWG  ++G LG   +  DV   PK     +   ++ VSCG   T  +   G +YT G 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G   +G+   + H  P  +   LD   + +V+CG++H  +V+   Q+F++G    G 
Sbjct: 61  NDYGQ--LGQ--DKGHKRP-TVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQ 115

Query: 401 LGH-----GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           LGH     GN  N  +P+ V+ L  L++  VACG  H+ A+ +            G++F+
Sbjct: 116 LGHTLEAGGN--NSRRPRMVKELSSLQIVQVACGGKHSLALSN-----------DGRIFS 162

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG+   G+LG    + +  P  +T L    F Q   G   +  L+  G V+  G    GQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG     DR        L+   V  IS G  H AVLT  G V T+G  + GQLG   +  
Sbjct: 223 LGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNH 282

Query: 576 RETPTFVEALRDRQVESVVCGSSITAA 602
              P  V  L   +V  + CG   T A
Sbjct: 283 EALPRKVFELMGLEVTQLACGRMHTMA 309



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 169/363 (46%), Gaps = 35/363 (9%)

Query: 234 GGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
           G A +G +     + D +L PK         ++ +S G +H   V  EG V+  G    G
Sbjct: 5   GAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGSNDYG 64

Query: 293 RLG----HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----H 343
           +LG    HK       P ++  L   ++Q VSCG++    +    ++++WG+++     H
Sbjct: 65  QLGQDKGHKR------PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGH 118

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
             +  G    R    PR +   L  +++ +VACG  H+  +S  G++F++G+ + G LG 
Sbjct: 119 TLEAGGNNSRR----PR-MVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI 173

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           G+ +N  +P+E+ SL G+    +  G  H+  +        KS A+    F +G    G+
Sbjct: 174 GSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVL-------SKSGAV----FGFGRNTFGQ 222

Query: 464 LGHVD-GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           LG  D G+RK  PT V  L        SCG   T  LT  G V T G+  +GQLG+    
Sbjct: 223 LGLGDTGDRKY-PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281

Query: 523 DRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
             ++     +L    V  ++ G  H +A + S G +Y++G   NGQLG   +    TP  
Sbjct: 282 HEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPIT 341

Query: 582 VEA 584
           V+ 
Sbjct: 342 VDG 344



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 24/240 (10%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +V+CG  HT  V   G ++T G   +G LG    +   +P  + +L    ++ V+CG +H
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYH 95

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV---DGERKLLPTCVTRLVDFDFVQA 489
              + D             ++F+WG  D G+LGH     G     P  V  L     VQ 
Sbjct: 96  NLVVNDKY-----------QVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQV 144

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           +CG   ++ L+  G++++ G+  HGQLG      + K + +T + G     F + ++ GS
Sbjct: 145 ACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI---PFCQIVAGGS 201

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            H  VL+  G+V+ +G+N  GQLGLGD+ +R+ PT V++LR  +V  + CG   TA + L
Sbjct: 202 -HSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTL 260


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +  +      C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 189/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +V+CG +H+  +S + ++F++G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQS-----SCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQS     S   C  P  FR
Sbjct: 337 SPFTVKG--NWFSYNGQCPPDIDSQEYFCVKRIFSGGDQSFSHYFSPQNCGPPDDFR 391


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 152/328 (46%), Gaps = 24/328 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      VQ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG   D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAIC 604
             P  V  L    V  + CG   T+A  
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 177/369 (47%), Gaps = 27/369 (7%)

Query: 219 KDVMIWGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           KD+  WG  + G   +GG  D ++         L+P+ L+     ++Q I+ G  +  ++
Sbjct: 26  KDMFCWGSTIHGELGLGGIEDENI---------LIPRELDFKKAAEIQQIACGENYTVVI 76

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T+ GE++  G    G+LGH+        +L+  L     +  +CG + T A+ + G++++
Sbjct: 77  TQIGEIYSCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKAACGAYHTLAINEWGQLFS 134

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N  G   +G           ++  TL    V ++ACG  H   ++ +G+L+++G  +
Sbjct: 135 WGSNTEGQ--LGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNS 192

Query: 398 FGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LG G + +   +PK + +  G+ +  +ACG +H+ AI           +  G +F W
Sbjct: 193 EGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAI-----------SKSGAVFGW 241

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G    G+LG  D + + LP  +  L +     A+CG   +V LT  G V+T G+ ++GQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G+    +  +     +L    V  IS G  H +A++ S G VY WG    GQLG   ++ 
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361

Query: 576 RETPTFVEA 584
             TP  V  
Sbjct: 362 VTTPQVVHG 370



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 154/330 (46%), Gaps = 22/330 (6%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           K+ ++FCWG    G LG     D  +  P+ ++      +Q ++CGE  T  +T+ GEIY
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           + G+N++G   +G  + R      +L   LD     K ACG +HT  ++  GQLF++G  
Sbjct: 84  SCGNNDYGQ--LGHEKGRKR---LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSN 138

Query: 397 TFGVLGHGNLQNV--SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           T G LG  N +N   S P+ V++L    V  +ACG  H  A+ +            G+L+
Sbjct: 139 TEGQLGL-NSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN-----------NGELY 186

Query: 455 TWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +WG   +G+LG   D + ++ P  ++  +       +CG   ++ ++  G V+  G    
Sbjct: 187 SWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTF 246

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG    +DR++      L+   +   + G      LT  G V+T G    GQLG G +
Sbjct: 247 GQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSN 306

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
                P  V  L    V  + CG   T A+
Sbjct: 307 SNEILPRQVMELMGSTVTQISCGKRHTLAL 336



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 32/287 (11%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           L K  +++ WG   HG   +G     +  +PR+L D      + ++ACGE +T +++  G
Sbjct: 22  LHKKKDMFCWGSTIHGELGLGGIEDENILIPREL-DFKKAAEIQQIACGENYTVVITQIG 80

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           ++++ G+  +G LGH   +   + + +  L     K  ACG +HT AI +          
Sbjct: 81  EIYSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKAACGAYHTLAINE---------- 128

Query: 449 IGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             G+LF+WG   +G+LG      ++   +++ T  T +V    VQ +CG      LT  G
Sbjct: 129 -WGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVV----VQIACGMKHAFALTNNG 183

Query: 504 KVYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           ++Y+ GS   GQLG       + K + I+   G      +  I+ G YH   ++  G+V+
Sbjct: 184 ELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIP----IAFIACGGYHSIAISKSGAVF 239

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            WGKN  GQLGL D+Q+R  P  ++ L++ ++    CG   +  + +
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTV 286


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +  +      C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +  +      C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         VQ++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVQDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 152/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      VQ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG   D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +  +      C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + PK ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I      C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWLPYNGQCPPDIDYEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +  +      C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 185/415 (44%), Gaps = 32/415 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+          +  +      C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 188/417 (45%), Gaps = 34/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G   Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFRR 628
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FRR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCGPPDDFRR 392


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 156/340 (45%), Gaps = 20/340 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +T  GEV+CWG    G+LG       S P  V  L    V++++ G+
Sbjct: 311 VTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLP-SGVETIAAGD 369

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCAL  SG ++ WG NN G    G   +RS   P  +     GV  + +A G  HT  
Sbjct: 370 YHTCALMSSGGVWCWGRNNSGQLGDGTTTARS--TPAAVSGLPSGV--TAIAAGGLHTCA 425

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           + +SG ++ +G    G LG G+  + S P  V  L    V+++A G WHT A+       
Sbjct: 426 LMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLA-SGVETIAAGGWHTCALTSS---- 480

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG  + G+LG       + P  V+ L        + G   T  LTG G
Sbjct: 481 -------GGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCALTGSG 532

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G  + GQLG+    DRS  V    L       I++G +H   LTS G V+ WG N
Sbjct: 533 GVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTV-IAAGRFHTCALTSSGGVWCWGAN 591

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +GQLG G +  R TP  V  L    V ++  G   T A+
Sbjct: 592 FDGQLGDGTTTNRTTPVAVSGL-PSGVTAIAAGGWHTCAL 630



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 153/339 (45%), Gaps = 20/339 (5%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           + +  D+  P  + S +   V+ I+ G  H   +T  G V+CWG    G+LG    +   
Sbjct: 445 DGSDTDSSTPVAV-SGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHI 503

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            P  V  L    V +++ G++ TCALT SG ++ WG+N  G    G    RS   P  + 
Sbjct: 504 TPVAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRS--TPVAVS 560

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
               GV V  +A G +HT  +++SG ++ +G    G LG G   N + P  V  L    V
Sbjct: 561 GLTSGVTV--IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLP-SGV 617

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
            ++A G WHT A+              G+++ WGD   G+LG      +  P  V+ L  
Sbjct: 618 TAIAAGGWHTCALTSS-----------GEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS 666

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
                 + G   T  LT  G+V+  G   +GQLG+    +RS       L    V  I++
Sbjct: 667 -GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAA 724

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           G YH   LT  G V  WG N +GQLG G    R TP  V
Sbjct: 725 GVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 763



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 147/322 (45%), Gaps = 19/322 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +   G V+CWG    G+LG   + D S P  V  L+   V++++ G 
Sbjct: 413 VTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLA-SGVETIAAGG 471

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCALT SG ++ WG NN G   +G+  +  H  P  +     GV  + +A G++HT  
Sbjct: 472 WHTCALTSSGGVWCWGRNNSGQ--LGDGSTIYHITPVAVSGLPSGV--TAIAAGDYHTCA 527

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ SG ++ +G    G LG G   + S P  V  L    V  +A G +HT A+       
Sbjct: 528 LTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLT-SGVTVIAAGRFHTCALTSS---- 582

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG    G+LG      +  P  V+ L        + G   T  LT  G
Sbjct: 583 -------GGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSG 634

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +V+  G   +GQLG+    +RS       L    V  I++G  H   LTS G V+ WG N
Sbjct: 635 EVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGWEHTCALTSSGEVWCWGDN 693

Query: 564 ANGQLGLGDSQERETPTFVEAL 585
             GQLG G +  R TP  V  L
Sbjct: 694 YYGQLGDGTTTNRSTPGAVSGL 715



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 143/322 (44%), Gaps = 19/322 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ I+ G  H   +   G V+CWG    G+LG       S P  V  L    V +++ G 
Sbjct: 362 VETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLP-SGVTAIAAGG 420

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             TCAL  SG ++ WG NN G   +G+        P  +     GV    +A G WHT  
Sbjct: 421 LHTCALMSSGGVWCWGLNNSGQ--LGDGSDTDSSTPVAVSGLASGVE--TIAAGGWHTCA 476

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +++SG ++ +G    G LG G+      P  V  L    V ++A G +HT A+       
Sbjct: 477 LTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLP-SGVTAIAAGDYHTCALTGS---- 531

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG    G+LG      +  P  V+ L     V A+ GR  T  LT  G
Sbjct: 532 -------GGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAA-GRFHTCALTSSG 583

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G+   GQLG+    +R+  V    L    V  I++G +H   LTS G V+ WG N
Sbjct: 584 GVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG-VTAIAAGGWHTCALTSSGEVWCWGDN 642

Query: 564 ANGQLGLGDSQERETPTFVEAL 585
             GQLG G +  R TP  V  L
Sbjct: 643 YYGQLGDGTTTNRSTPGAVSGL 664



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 144/319 (45%), Gaps = 19/319 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I+ G  H   +   G V+CWG    G+LG   + D S P  V  L    V +++ G++ T
Sbjct: 263 IAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLP-SGVTAIAAGDYHT 321

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
           CALT SGE++ WG N  G    G   +RS   P  +     GV    +A G++HT  + +
Sbjct: 322 CALTGSGEVWCWGGNGFGQLGDGTTTARS--TPAAVSGLPSGVE--TIAAGDYHTCALMS 377

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG ++ +G    G LG G     S P  V  L    V ++A G  HT A++         
Sbjct: 378 SGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLP-SGVTAIAAGGLHTCALMSS------- 429

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G ++ WG  + G+LG         P  V+ L       A+ G   T  LT  G V+
Sbjct: 430 ----GGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIAA-GGWHTCALTSSGGVW 484

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G    GQLG+  +    IT V        V  I++G YH   LT  G V+ WG N +G
Sbjct: 485 CWGRNNSGQLGD-GSTIYHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSG 543

Query: 567 QLGLGDSQERETPTFVEAL 585
           QLG G + +R TP  V  L
Sbjct: 544 QLGDGTTTDRSTPVAVSGL 562



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 144/343 (41%), Gaps = 25/343 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +T  G V CWG    G+LG       S P  V  L    V +++ G 
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLP-SGVTAIAAGN 113

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCALT SG +  WG N  G    G    RS   P  +     G  V+ +A G  HT  
Sbjct: 114 YHTCALTGSGGVRCWGANYSGQLGNGLTFGRS--TPGAVSGLPSG--VTAIAAGGDHTCA 169

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           + +SG +  +GD  +G LG G   N   P  V  L    V ++A G  HT A+       
Sbjct: 170 LMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLP-SGVTAIAAGGLHTCALTGS---- 224

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  G+++ WG    G+LG  DG        P  V  L        + G + T  L 
Sbjct: 225 -------GEVWCWGYNYYGQLG--DGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALM 274

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G V+  G    GQLG+    D S  V    L    V  I++G YH   LT  G V+ W
Sbjct: 275 SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG-VTAIAAGDYHTCALTGSGEVWCW 333

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G N  GQLG G +  R TP  V  L    VE++  G   T A+
Sbjct: 334 GGNGFGQLGDGTTTARSTPAAVSGL-PSGVETIAAGDYHTCAL 375



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 148/341 (43%), Gaps = 21/341 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +   G V CWG+   G+LG     +   P  V  L    V +++ G 
Sbjct: 157 VTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLP-SGVTAIAAGG 215

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             TCALT SGE++ WG+N +G  L     + S   P  +     G  ++ +A G  HT  
Sbjct: 216 LHTCALTGSGEVWCWGYNYYG-QLGDGTTTYSRSTPAAVGGLPSG--MTAIAAGGLHTCA 272

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           + +SG ++ +G    G LG G+  + S P  V  L    V ++A G +HT A+       
Sbjct: 273 LMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLP-SGVTAIAAGDYHTCALTGS---- 327

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQASCGRMLTVGLTGL 502
                  G+++ WG    G+LG      +  P  V+ L    + + A  G   T  L   
Sbjct: 328 -------GEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSGVETIAA--GDYHTCALMSS 378

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G V+  G    GQLG+     RS       L    V  I++G  H   L S G V+ WG 
Sbjct: 379 GGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG-VTAIAAGGLHTCALMSSGGVWCWGL 437

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N +GQLG G   +  TP  V  L    VE++  G   T A+
Sbjct: 438 NNSGQLGDGSDTDSSTPVAVSGLA-SGVETIAAGGWHTCAL 477


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 163/332 (49%), Gaps = 27/332 (8%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            DV +WG G +       +   + Q +   D LLP  LES  + DV ++S+G  H A V  
Sbjct: 769  DVYLWGRGAVKTPAVPIL--GIPQIE---DQLLPFKLES--LSDVVSVSIGFCHGAAVRA 821

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             GE+  WG G++G+LGH    +   PK+++ L+   +  V CGE  T  LTK+G++Y+WG
Sbjct: 822  NGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWG 881

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             + +G   +G+     H  P ++   L+   V ++A G  H A+++TS ++  +G+G   
Sbjct: 882  ASEYGQLGLGD--VTQHSSPMQV-SALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG--A 936

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             +G  ++  VS P  V SL+ L +  + CG + TAAI +     C      G ++TWG  
Sbjct: 937  AMGAASV--VSLPTLVPSLKYLHIDRLCCGHYSTAAITE-----C------GDVYTWGTG 983

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             +  LGH     +  P  +  L +    Q SCG   T  LT  G+++T G    GQLG  
Sbjct: 984  QE--LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQM 1041

Query: 520  KAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
                     +E   K  F+      +Y+VA+ 
Sbjct: 1042 SGDQNKPKRIESLTKTTFISVSCGENYNVALF 1073



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 157/335 (46%), Gaps = 32/335 (9%)

Query: 276  LVTKEGEVFCWGEGKDGR-----LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
            ++T+ G+V+ WG G         LG     D   P  +E LS  +V SVS G     A+ 
Sbjct: 763  VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS--DVVSVSIGFCHGAAVR 820

Query: 331  KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
             +GE+ TWG   +G   +G   + +   P K+  +L    +++V CGE HT  ++ +G++
Sbjct: 821  ANGELLTWGVGENGQ--LGHGDTNNQIEP-KIIQSLTSFWITQVQCGEKHTICLTKNGKV 877

Query: 391  FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
            +++G   +G LG G++   S P +V +L    V  +A G  H A +              
Sbjct: 878  YSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVL-----------TTS 926

Query: 451  GKLFTWGD-ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
             ++  +G+ A  G    V      LPT V  L      +  CG   T  +T  G VYT G
Sbjct: 927  KEVLVFGNGAAMGAASVVS-----LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG 981

Query: 510  SAVH-GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +    G  GN  + + S  ++E  L+ + ++ IS G  H A LT  G ++T GK++ GQL
Sbjct: 982  TGQELGHGGN--STETSPKLIEA-LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQL 1038

Query: 569  GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G   S ++  P  +E+L      SV CG +   A+
Sbjct: 1039 G-QMSGDQNKPKRIESLTKTTFISVSCGENYNVAL 1072



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 22/227 (9%)

Query: 383 IVSTSGQLFTYGDGTF-----GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           +++ +G ++ +G G        +LG   +++   P ++ESL    V SV+ G  H AA+ 
Sbjct: 763 VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS--DVVSVSIGFCHGAAV- 819

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                  ++N   G+L TWG  + G+LGH D   ++ P  +  L  F   Q  CG   T+
Sbjct: 820 -------RAN---GELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTI 869

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            LT  GKVY+ G++ +GQLG       S  +    L++  V  I+SGS H AVLT+   V
Sbjct: 870 CLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEV 929

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             +G  A     +G +     PT V +L+   ++ + CG   TAAI 
Sbjct: 930 LVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAIT 972



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 10/176 (5%)

Query: 263  DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
            +V  I+ G+ H A++T   EV  +G G    +G      VS P LV  L  +++  + CG
Sbjct: 909  NVLQIASGSTHCAVLTTSKEVLVFGNG--AAMG--AASVVSLPTLVPSLKYLHIDRLCCG 964

Query: 323  EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
             + T A+T+ G++YTWG    G +L G   + +   P KL + L    + +++CG  HTA
Sbjct: 965  HYSTAAITECGDVYTWGT---GQEL-GHGGNSTETSP-KLIEALRNQSIRQISCGGRHTA 1019

Query: 383  IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             ++ SG++FT G  +FG LG  +  + ++PK +ESL      SV+CG  +  A+ D
Sbjct: 1020 FLTDSGRIFTCGKDSFGQLGQMS-GDQNKPKRIESLTKTTFISVSCGENYNVALFD 1074



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 7/166 (4%)

Query: 451 GKLFTWGDADKGR-----LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           G ++ WG           LG    E +LLP  +  L D   V  S G      +   G++
Sbjct: 768 GDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFCHGAAVRANGEL 825

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            T G   +GQLG+    ++    +   L   ++  +  G  H   LT  G VY+WG +  
Sbjct: 826 LTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEY 885

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
           GQLGLGD  +  +P  V AL    V  +  GS+  A +   K + V
Sbjct: 886 GQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLV 931


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 188/381 (49%), Gaps = 34/381 (8%)

Query: 210 PLIE-RKDILK--DVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLD 263
           P+IE +K +LK  D+  WG    G LG  +GG  D  +         L+P  ++     +
Sbjct: 35  PVIEVQKSLLKKEDMFCWGNTRHGELG--LGGIEDEII---------LVPCEVDFKKASE 83

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +Q I+ G  +  ++T +G+++  G    G+LGH+        +L+  L     +  +CG 
Sbjct: 84  IQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRL--QLILGLDAFVFKKAACGA 141

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + T A+ + G++++WG N+ G   +G           ++  TL    + ++ACG  H   
Sbjct: 142 YHTIAVNEWGQLFSWGSNSEGQ--LGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++ +G+L+++G  + G LG G +++   +PK + +L G+ +  +ACG +H+ AI      
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAI------ 253

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
             KS AI    F WG    G+LG  D + + LP  +  L +     A+CG   +V LT  
Sbjct: 254 -SKSGAI----FGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVD 308

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+ ++GQLG+    +  +     +L    V  IS G  H +A++ S G VY WG
Sbjct: 309 GGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWG 368

Query: 562 KNANGQLGLGDSQERETPTFV 582
               GQLG   ++   TP  V
Sbjct: 369 LGGAGQLGNNSTRSTTTPQVV 389



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 32/288 (11%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +  N        P+++++     +  I+ G KHA  +T  GE++ WG   +G+
Sbjct: 157 GSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQ 216

Query: 294 LGHKVNMDVSC---PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
           LG  + +D+ C   PKL+  L+G+ +  ++CG + + A++KSG I+ WG N  G   + +
Sbjct: 217 LG--LGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND 274

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
            ++R+  LP +L  TL   +V   ACGE  +  ++  G +FT G G +G LGHG+  N  
Sbjct: 275 TQNRN--LPYQL-QTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEI 331

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P++V  L G  V  ++CG  HT A+V             G+++ WG    G+LG+    
Sbjct: 332 LPRQVMELMGSTVTQISCGKRHTLALVPSQ----------GRVYAWGLGGAGQLGNNSTR 381

Query: 471 RKLLPTCV---------TRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
               P  V         + ++DFD   +SC    TVG   +  ++T G
Sbjct: 382 STTTPQVVRGPWVAPNGSSMMDFDKQFSSC----TVGYV-VKHIFTGG 424



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 22/332 (6%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           + K+ ++FCWG  + G LG     D  +  P  V+      +Q ++CGE  T  +T  G+
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           IY+ G+N++G   +G  + R      +L   LD     K ACG +HT  V+  GQLF++G
Sbjct: 103 IYSCGNNDYGQ--LGHEQGRKRL---QLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWG 157

Query: 395 DGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
             + G LG  N +N  +  P+ V++L    +  +ACG  H  A+ +            G+
Sbjct: 158 SNSEGQLGL-NSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTN-----------NGE 205

Query: 453 LFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           L++WG   +G+LG  VD   ++ P  +  L        +CG   ++ ++  G ++  G  
Sbjct: 206 LYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKN 265

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG    ++R++      L+   V   + G      LT  G V+T G    GQLG G
Sbjct: 266 TFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 325

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +     P  V  L    V  + CG   T A+
Sbjct: 326 SNNNEILPRQVMELMGSTVTQISCGKRHTLAL 357



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 32/288 (11%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           +L K  +++ WG+  HG   +G        +P ++ D      + ++ACGE +T +++  
Sbjct: 42  SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEV-DFKKASEIQQIACGENYTVVITHD 100

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G++++ G+  +G LGH   Q   + + +  L     K  ACG +HT A+ +         
Sbjct: 101 GKIYSCGNNDYGQLGHE--QGRKRLQLILGLDAFVFKKAACGAYHTIAVNE--------- 149

Query: 448 AIGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
              G+LF+WG   +G+LG      ++   +++ T  T ++    VQ +CG    + LT  
Sbjct: 150 --WGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSII----VQIACGMKHALALTNN 203

Query: 503 GKVYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           G++Y+ GS   GQLG       + K + I  + G      +  I+ G YH   ++  G++
Sbjct: 204 GELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVP----IAFIACGGYHSIAISKSGAI 259

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           + WGKN  GQLGL D+Q R  P  ++ LR+ +V    CG   +  + +
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTV 307



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 21/212 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+ +   + +  I+ G  H+  ++K G +F WG+   G+LG     + + P  ++ L 
Sbjct: 229 PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLR 288

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V   +CGE  +  LT  G ++T G   +G   +G   + +  LPR++ + L G  V+
Sbjct: 289 NAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQ--LGHGSNNNEILPRQVME-LMGSTVT 345

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           +++CG+ HT A+V + G+++ +G G  G LG+ + ++ + P+ V             GPW
Sbjct: 346 QISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVR------------GPW 393

Query: 432 ---HTAAIVDI--MVDRCKSNAIGGKLFTWGD 458
              + ++++D       C    +   +FT GD
Sbjct: 394 VAPNGSSMMDFDKQFSSCTVGYVVKHIFTGGD 425


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 42/365 (11%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK--VNMDVSCPK 306
           + L+P+ +     L V  +S G KH+ LVT++G+++  G     +LG +          K
Sbjct: 104 EVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFK 163

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWG---HNNHGADLVGERRSRSHWLPRKLF 363
            VE L+ I ++ V+CG++ T AL+K G++Y WG   HN  G D   ER+  + + P  L 
Sbjct: 164 PVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG-DRSQERKDNAKYKPV-LL 221

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
            +  G ++ ++ CG++H+  +  +G L+++G G  G  GHG  ++   P+ ++   G  +
Sbjct: 222 QSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKII 281

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV----- 478
             +  G  HT AI               +++ WGD   G+ G  + E   +P  V     
Sbjct: 282 TQIEAGNHHTLAI-----------TADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQ 330

Query: 479 ---TRLVD-------FDFV-------QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
              T  +D        +F        Q + G M T+ LT  G++++ G    GQLG+   
Sbjct: 331 GNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTV 390

Query: 522 KDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +     +VEG L  + V+ +++G  H   LT+   VY  G N  GQ GL D + R+T +
Sbjct: 391 DNYCRPKLVEGMLNHKTVQ-VAAGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFS 449

Query: 581 FVEAL 585
            V +L
Sbjct: 450 HVLSL 454



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 162/374 (43%), Gaps = 52/374 (13%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ +G+   G LG     +V  P+ V  L  + V  +S G   +  +T+ G+++  G N 
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145

Query: 343 HGADLVG----ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           H  D +G       S+  + P +L   L  + + +VACG++HT  +S  GQ++ +G    
Sbjct: 146 H--DKLGLEGITTGSKKTFKPVEL---LTQIFIKQVACGDYHTLALSKEGQVYVWGGSLH 200

Query: 399 GVLGHGNLQNVS----QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
              G  + +       +P  ++S  G K+K + CG +H+ A+ D            G L+
Sbjct: 201 NKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDD-----------NGTLY 249

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFD---FVQASCGRMLTVGLTGLGKVYTMGSA 511
           +WG  +KG  GH   E +  P    R+  FD     Q   G   T+ +T   +VY  G  
Sbjct: 250 SWGVGEKGECGHGKFEDQETPQ---RIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDG 306

Query: 512 VHGQLG-------------NPKAKDRSITVVEGKLKEEF---------VKGISSGSYHVA 549
            +GQ G             N  ++  + + ++  +++E          +K I++G  H  
Sbjct: 307 RYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTL 366

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           VLTS G ++++G N  GQLG         P  VE + + +   V  G + +  +     +
Sbjct: 367 VLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDV 426

Query: 610 SVGDQSSCSQCRMP 623
                +   QC +P
Sbjct: 427 YACGNNQYGQCGLP 440



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 24/234 (10%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G  SQ +       P LL+S     ++ I  G  H+  +   G ++ WG G+ G  GH  
Sbjct: 204 GDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGK 263

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
             D   P+ ++   G  +  +  G   T A+T   ++Y WG   +G    GE  + +  +
Sbjct: 264 FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTA--I 321

Query: 359 PR------------KLFDTL---------DGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           P+             L D++         D  ++ ++A GE HT ++++SGQ+F++G   
Sbjct: 322 PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQ 381

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM-VDRCKSNAIG 450
            G LGH  + N  +PK VE +   K   VA G  H+  + +   V  C +N  G
Sbjct: 382 QGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYG 435



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 9/124 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ I+ G  H  ++T  G++F +G  + G+LGH    +   PKLVE +       V+ G 
Sbjct: 355 IKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGR 414

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSR---SHWLPRKLFDTLDGVRVSKVACGEWH 380
             +  LT   ++Y  G+N +G   + +R  R   SH L      +L  V   K+  G +H
Sbjct: 415 NHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVL------SLLSVNSFKLYAGGFH 468

Query: 381 TAIV 384
           + +V
Sbjct: 469 SWVV 472


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 139/251 (55%), Gaps = 23/251 (9%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           +H+A VT++G+V+ WG GK G+LGH  + ++  P+L+  L    +  V+CG   T  ++K
Sbjct: 45  QHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSK 104

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           +G ++ WG  + G   VG   + +   P ++  +LDGV+V KVACG  HTA+V+ SG ++
Sbjct: 105 AGLVFAWGWGHFGQLGVGSTHNSND--PVQV-TSLDGVKVCKVACGSAHTAVVTESGHVY 161

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           T+G G  G LGHG+  + S+P  V+ L G+ V ++ACG  HT  + +  VDR        
Sbjct: 162 TWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSE--VDR-------- 211

Query: 452 KLFTWGDADKGRLGH-----VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +F+WG  + G+LGH       G +   P  +      D  Q +CG   T+ L+  G VY
Sbjct: 212 AVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIK-----DLQQIACGSSYTLALSSRGDVY 266

Query: 507 TMGSAVHGQLG 517
             G    GQLG
Sbjct: 267 AFGWGKDGQLG 277



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 150/297 (50%), Gaps = 31/297 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG----EFQTCALTKSGEIYTWG 339
           F WG   DG LG      V  P  +  L G+ V SV+CG    E  + A+T+ G++YTWG
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
               G   +G   S++  LPR L   L    + +VACG  HT +VS +G +F +G G FG
Sbjct: 61  SGKSGQ--LGHGDSQNLVLPR-LIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LG G+  N + P +V SL G+KV  VACG  HTA + +            G ++TWG  
Sbjct: 118 QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTE-----------SGHVYTWGWG 166

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQLGN 518
             G+LGH D   +  P  V +L        +CG   TV ++ + + V++ G   +GQLG+
Sbjct: 167 VNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH 226

Query: 519 PKA------KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
                    K+RS   ++  L++     I+ GS +   L+S G VY +G   +GQLG
Sbjct: 227 GGWDIFGGNKNRSPRPIK-DLQQ-----IACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 105/217 (48%), Gaps = 15/217 (6%)

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW----HTAAIVDIMVDRCKS 446
           F++G    G LG G    V  P  + +L+GL V SVACG      H+AA+ +        
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQ------- 53

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G+++TWG    G+LGH D +  +LP  +  L     V+ +CG   TV ++  G V+
Sbjct: 54  ----GQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVF 109

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G    GQLG     + +  V    L    V  ++ GS H AV+T  G VYTWG   NG
Sbjct: 110 AWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNG 169

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           QLG GD   +  P +V+ L    V ++ CG + T  +
Sbjct: 170 QLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVV 206



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 132/278 (47%), Gaps = 29/278 (10%)

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG----EWHTAIVSTSGQLF 391
           ++WG NN GA  +G   +     P      L G+ V  VACG    E H+A V+  GQ++
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCP---IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVY 57

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           T+G G  G LGHG+ QN+  P+ +  L+   +  VACG  HT     ++V +       G
Sbjct: 58  TWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHT-----VVVSKA------G 106

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            +F WG    G+LG         P  VT L      + +CG   T  +T  G VYT G  
Sbjct: 107 LVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWG 166

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG-SVYTWGKNANGQLGL 570
           V+GQLG+     +S  +   KL   +V  ++ G  H  V++    +V++WG +  GQLG 
Sbjct: 167 VNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH 226

Query: 571 G-----DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G        +  +P     ++D Q   + CGSS T A+
Sbjct: 227 GGWDIFGGNKNRSP---RPIKDLQ--QIACGSSYTLAL 259



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 8/189 (4%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           +LP+L+       +  ++ G+ H  +V+K G VF WG G  G+LG     + + P  V  
Sbjct: 76  VLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTS 135

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF-DTLDGV 369
           L G+ V  V+CG   T  +T+SG +YTWG   +G    G+  S+S    R ++   L G+
Sbjct: 136 LDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQS----RPMYVKKLHGI 191

Query: 370 RVSKVACGEWHTAIVS-TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVA 427
            VS +ACG  HT +VS     +F++G   +G LGHG        K   S R +K ++ +A
Sbjct: 192 YVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKN-RSPRPIKDLQQIA 250

Query: 428 CGPWHTAAI 436
           CG  +T A+
Sbjct: 251 CGSSYTLAL 259


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + PK ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I      C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWLPYNGQCPPDIDYEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 153/325 (47%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  E   G  V+ V CG   T  L + G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G  +SR    P ++   LD   +  ++CGE HT  ++  GQ+F++G G+ G 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  N +  +  P+ ++SL  ++V  VACG WH+ A+           + GG +F+WG  
Sbjct: 116 LGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLAL-----------SKGGHIFSWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG  + G+   +P  +  L    F Q + G   +  LT  G V+  G    GQLG 
Sbjct: 165 RYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               DR    +   L+ + V  IS G  H A LT  G V+T+G    GQLG   +     
Sbjct: 225 NDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L    V  + CG   T A 
Sbjct: 285 PRKVFELMGNVVTQIACGRQHTLAF 309



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 25/327 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+++  G +H A + ++G V+  G    G+LGH+ +     P+ V  L    + ++SCGE
Sbjct: 36  VRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQIIVALSCGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T AL   G++++WG  + G  L          +PR +  +L  V+V++VACG WH+  
Sbjct: 94  SHTLALNDKGQVFSWGLGSDG-QLGLNNFEECIRVPRNI-KSLSDVQVAQVACGYWHSLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +S  G +F++G   +G LG G   Q++S P+ ++SL+G+    +A G  H+ A+      
Sbjct: 152 LSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                 + G +F WG    G+LG  D   +  P  +  L     +  SCG   T  LT  
Sbjct: 206 -----TLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKE 260

Query: 503 GKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT-SGGSV 557
           G V+T G+  +GQLG    N +   R +  + G +    V  I+ G  H    T S G +
Sbjct: 261 GGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV----VTQIACGRQHTLAFTPSSGKM 316

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEA 584
            ++G   NGQLG   +  R++P  V+ 
Sbjct: 317 DSFGLGGNGQLGTRSTCNRKSPAPVKG 343



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 18/273 (6%)

Query: 257 ESAVMLDVQNI---SLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLS 312
           E  V LD Q I   S G  H   +  +G+VF WG G DG+LG +     +  P+ ++ LS
Sbjct: 76  EQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLS 135

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            + V  V+CG + + AL+K G I++WG N +G   +G    +S  +P+ L  +L G+  +
Sbjct: 136 DVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG-MTGQSISVPQHL-QSLQGIPFA 193

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           ++A G  H+  ++ SG +F +G   FG LG  +  +   P  +++LR  +V  ++CG  H
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDH 253

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TAA+              G +FT+G    G+LGH     ++ P  V  L+     Q +CG
Sbjct: 254 TAALTK-----------EGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACG 302

Query: 493 RMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDR 524
           R  T+  T   GK+ + G   +GQLG     +R
Sbjct: 303 RQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNR 335



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +  N  +    +P+ ++S   + V  ++ G  H+  ++K G +F WG+ + G+
Sbjct: 109 GLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQ 168

Query: 294 LGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  +    +S P+ ++ L GI    ++ G   + ALT SG ++ WG N  G   +G   
Sbjct: 169 LGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQ--LGLND 226

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           +     P  L   L   RV  ++CGE HTA ++  G +FT+G G +G LGH +  +   P
Sbjct: 227 TNDRCFP-ALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           ++V  L G  V  +ACG  HT A               GK+ ++G    G+LG
Sbjct: 286 RKVFELMGNVVTQIACGRQHTLAF----------TPSSGKMDSFGLGGNGQLG 328



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 16/181 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           +P+ L+S   +    I+ G  H+  +T  G VF WG  K G+LG     D   P L++ L
Sbjct: 180 VPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKAL 239

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
               V  +SCGE  T ALTK G ++T+G   +G   +G   +     PRK+F+ +  V V
Sbjct: 240 RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSTNHEVNPRKVFELMGNV-V 296

Query: 372 SKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +++ACG  HT A   +SG++ ++G G  G LG  +  N   P  V+            GP
Sbjct: 297 TQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVK------------GP 344

Query: 431 W 431
           W
Sbjct: 345 W 345


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT-SGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H +    S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 148/322 (45%), Gaps = 19/322 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +T  G V+CWG    G+LG       S P  V  L    V++++ G+
Sbjct: 310 VTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLP-SGVETIAAGD 368

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCAL  SG +  WGHN+ G    G   +RS   P  +     GV  + +A G  HT  
Sbjct: 369 YHTCALMSSGGVRCWGHNDRGQLGDGTTTARS--TPVAVSGLPSGV--TAIAAGRLHTCA 424

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            ++SG ++ +GD + G LG G+  + S P  V  L    V+++A G WHT A+       
Sbjct: 425 RTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLA-SGVETIAAGGWHTCALTGS---- 479

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG  + G+LG       + P  V+ L        + G + T  LTG G
Sbjct: 480 -------GGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSG 531

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G    GQLG+    DRS  V    L    V  I++G  H   LT  G V+ WG N
Sbjct: 532 GVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG-VTAIAAGDIHTCALTGSGGVWCWGGN 590

Query: 564 ANGQLGLGDSQERETPTFVEAL 585
             GQLG G +  R TP  V  L
Sbjct: 591 DFGQLGDGTTTNRSTPVAVSGL 612



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 153/340 (45%), Gaps = 20/340 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H    T  G V+CWG    GRLG     D S P  V  L    V +++ G 
Sbjct: 55  VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLP-SGVTAIAAGG 113

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             TCALT SGE++ WG N +G    G   +RS   P  +     GV  + +A G WHT  
Sbjct: 114 AHTCALTSSGEVWCWGSNFYGQLGDGSYTTRS--TPVAVSGLPSGV--TAIAAGGWHTCA 169

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            ++SG ++ +G    G LG G   + S P  V  L   +V ++A G  HT A       R
Sbjct: 170 RTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLP-SEVTAIAAGDAHTCA-------R 221

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             S    G+++ WG  + G+LG         P  V+ L        + G + T  LTG G
Sbjct: 222 MSS----GEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGVHTCALTGSG 276

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V   G+   GQLGN     RS       L    V  I++G YH   LT  G V+ WG N
Sbjct: 277 GVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG-VTAIAAGDYHTCALTGSGGVWCWGGN 335

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +GQLG G +  R TP  V  L    VE++  G   T A+
Sbjct: 336 YSGQLGDGTTTARSTPVAVSGL-PSGVETIAAGDYHTCAL 374



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 154/340 (45%), Gaps = 21/340 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H    T  G V+CWG+  DG+LG     D S P  V  L+   V++++ G 
Sbjct: 412 VTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLA-SGVETIAAGG 470

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCALT SG ++ WG NN G   +G+  +  H  P  +     GV  + +A G  HT  
Sbjct: 471 WHTCALTGSGGVWCWGRNNSGQ--LGDGSTIYHITPVAVSGLPSGV--TAIAAGGVHTCA 526

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ SG ++ +G    G LG G   + S P  V  L    V ++A G  HT A+       
Sbjct: 527 LTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLP-SGVTAIAAGDIHTCALTGS---- 581

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG  D G+LG      +  P  V+ L        + G   T  LTG G
Sbjct: 582 -------GGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSG 633

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G  + GQL +     RS  V    L    V  I++G ++    TS G V  WG N
Sbjct: 634 GVWCWGYNLSGQL-DDGTTSRSTPVAVSGLPSG-VTAIAAGGWYTCARTSSGGVRCWGAN 691

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +GQLG G + +R TP  V  L    V ++  G   T A+
Sbjct: 692 GSGQLGDGTTTKRSTPVAVSGL-PSGVTAIAAGGEHTCAL 730



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 157/372 (42%), Gaps = 44/372 (11%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG    G D G   DGS + + T V         S +   V  I+ G  H   +T  
Sbjct: 74  VWCWG----GNDFGRLGDGSYTDSSTPVAV-------SGLPSGVTAIAAGGAHTCALTSS 122

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           GEV+CWG    G+LG       S P  V  L    V +++ G + TCA T SG ++ WG 
Sbjct: 123 GEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLP-SGVTAIAAGGWHTCARTSSGGVWCWGG 181

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G    G    RS   P  +        V+ +A G+ HT    +SG+++ +G   +G 
Sbjct: 182 NYRGQLGDGTTTDRS--TPVAVSGLPS--EVTAIAAGDAHTCARMSSGEVWCWGGNNYGQ 237

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G+  + S P  V  L    V ++A G  HT A+      RC           WG   
Sbjct: 238 LGDGSYTDSSTPVAVSGLP-SGVTAIAAGGVHTCALTGSGGVRC-----------WGANY 285

Query: 461 KGRLGH-------VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            G+LG+         G    LP+ VT +   D+         T  LTG G V+  G    
Sbjct: 286 SGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGDY--------HTCALTGSGGVWCWGGNYS 337

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG+     RS  V    L    V+ I++G YH   L S G V  WG N  GQLG G +
Sbjct: 338 GQLGDGTTTARSTPVAVSGLPSG-VETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTT 396

Query: 574 QERETPTFVEAL 585
             R TP  V  L
Sbjct: 397 TARSTPVAVSGL 408



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 151/348 (43%), Gaps = 26/348 (7%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DGS + + T V         S +   V  I+ G  H   +T  G V CWG    G+LG+ 
Sbjct: 240 DGSYTDSSTPVAV-------SGLPSGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNG 292

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
           +    S P  V  L    V +++ G++ TCALT SG ++ WG N  G    G   +RS  
Sbjct: 293 LTFGRSTPGAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARS-- 349

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  +     GV    +A G++HT  + +SG +  +G    G LG G     S P  V  
Sbjct: 350 TPVAVSGLPSGVE--TIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSG 407

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    V ++A G  HT A       R  S    G ++ WGD   G+LG         P  
Sbjct: 408 LP-SGVTAIAAGRLHTCA-------RTSS----GGVWCWGDNSDGQLGDGSFTDSSTPVA 455

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           V+ L       A+ G   T  LTG G V+  G    GQLG+  +    IT V        
Sbjct: 456 VSGLASGVETIAA-GGWHTCALTGSGGVWCWGRNNSGQLGD-GSTIYHITPVAVSGLPSG 513

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           V  I++G  H   LT  G V+ WG N  GQLG G + +R TP  V  L
Sbjct: 514 VTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGL 561



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 147/346 (42%), Gaps = 29/346 (8%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DGS + + T V         S +   V+ I+ G  H   +T  G V+CWG    G+LG  
Sbjct: 444 DGSFTDSSTPVAV-------SGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDG 496

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             +    P  V  L    V +++ G   TCALT SG ++ WG N  G    G    RS  
Sbjct: 497 STIYHITPVAVSGLP-SGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRS-- 553

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  +     GV  + +A G+ HT  ++ SG ++ +G   FG LG G   N S P  V  
Sbjct: 554 TPVAVSGLPSGV--TAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSG 611

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-RKLLPT 476
           L    V ++A G  +T A+              G ++ WG    G+L   DG   +  P 
Sbjct: 612 LP-SGVTAIAAGLRYTCALTGS-----------GGVWCWGYNLSGQL--DDGTTSRSTPV 657

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V+ L        + G   T   T  G V   G+   GQLG+     RS  V    L   
Sbjct: 658 AVSGLPS-GVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPSG 716

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            V  I++G  H   L S G V+ WG+N +GQLG G    R TP  V
Sbjct: 717 -VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVDV 761


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 165/326 (50%), Gaps = 38/326 (11%)

Query: 300 MDVSCPKL------VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           +D S P +      +E  + + ++ V+        +T    +Y+WG  + G    G+   
Sbjct: 57  IDTSLPGIPPIPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDP 116

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
           R+  +P  + + L G  +++VACG   +   S +G + T GDG+ G LGHG+  + S+P+
Sbjct: 117 RN--VPTSV-EALKGKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPR 173

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            +E+L  + V S++CGP H   +V + VD        G++F WG    GRLG  D E   
Sbjct: 174 LIETLLSVDVTSISCGPEH---VVGVGVD--------GEIFAWGKGKDGRLGLGDEEDFC 222

Query: 474 LPTCVTRLVDFDFVQ-ASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPK----AKDRSI- 526
            P  VT L D  F+Q   CG   T+ LT +G +   GS  + +LG N +    A  +++ 
Sbjct: 223 EPMEVT-LRDPVFIQEVKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMF 281

Query: 527 --TVVEGKLKEEFVKGISS--------GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             T VEG+     VK +S         G +H AV+   G VY +GKN +GQLG G+++ R
Sbjct: 282 TKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPR 341

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
           E P  V+ + D+ + +V CG   T A
Sbjct: 342 EAPAQVQTMADKLISTVACGEDYTVA 367



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 146/331 (44%), Gaps = 22/331 (6%)

Query: 247 QVDALLPKL------LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
           Q+D  LP +      +E   +L ++ +++   H ALVT E  V+ WGEG  G+LGH    
Sbjct: 56  QIDTSLPGIPPIPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLD 115

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
             + P  VE L G ++  V+CG   +   + +G + T G  + G    G+  S S   PR
Sbjct: 116 PRNVPTSVEALKGKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASR--PR 173

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            L +TL  V V+ ++CG  H   V   G++F +G G  G LG G+ ++  +P EV     
Sbjct: 174 -LIETLLSVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDP 232

Query: 421 LKVKSVACGPWHTAAIVDI-MVDRCKSNAIG--------GKLFTWGDADKGRLGHVDGER 471
           + ++ V CG   T  + D+  +  C SNA          G L +     K      + E 
Sbjct: 233 VFIQEVKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASM----KNMFTKTEVEG 288

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
           + +PT V  L  F  +    G   +  +   G VY  G   HGQLG    K R       
Sbjct: 289 RKVPTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQ 348

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            + ++ +  ++ G  +         +Y WGK
Sbjct: 349 TMADKLISTVACGEDYTVAGAMDNFLYLWGK 379



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            P  V+ LS   V  +  G   +  + + G +Y +G N HG    G  + R    P ++ 
Sbjct: 291 VPTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPRE--APAQVQ 348

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
              D + +S VACGE +T   +    L+ +G G
Sbjct: 349 TMADKL-ISTVACGEDYTVAGAMDNFLYLWGKG 380


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 29/363 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V     + +  L K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK--------TVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T  L   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGF 110

Query: 341 NNHG-ADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
              G   L G E  +R   +PR +  +L  V++ +VACG +H+  +S   ++F++G    
Sbjct: 111 AADGQLGLPGTEEYTR---VPRNI-KSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166

Query: 399 GVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG G +L+  + P+ ++SL G+    +A G  H+ A+            + G +F WG
Sbjct: 167 GQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFAL-----------TLSGAVFGWG 215

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG  D   + +P  +  L     V  SCG   T  LT  G V+T G+  +GQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +             +L    V  I+ G  H  A + S G +Y++G   NGQLG+G +  R
Sbjct: 276 HNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335

Query: 577 ETP 579
           ++P
Sbjct: 336 KSP 338



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 20/326 (6%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ +V   P+         V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G    G 
Sbjct: 61  NDLGQ--LGHEKSRKR--PEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115

Query: 401 LG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  G  +    P+ ++SL  +++  VACG +H+ A+           + G ++F+WG  
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL-----------SKGSEVFSWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   D +++  P  +  L+   F Q + G   +  LT  G V+  G    GQLG 
Sbjct: 165 KHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               DR +  +   L+ + +  IS G  H A LT  G V+T+G    GQLG   +     
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEIN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAIC 604
           P  V  L    V  + CG   T+A  
Sbjct: 285 PRKVFELMGNIVTQIACGRQHTSAFV 310



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L++S + +    I+ G  H+  +T  G VF WG  K G+LG     D   P L++ L 
Sbjct: 181 PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLR 240

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  +SCGE  T ALTK G ++T+G   +G   +G   +     PRK+F+ +  + V+
Sbjct: 241 SQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSTGHEINPRKVFELMGNI-VT 297

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
           ++ACG  HT A V ++G+++++G G  G LG G+  N   P  V+
Sbjct: 298 QIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 153/330 (46%), Gaps = 39/330 (11%)

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           ++ P+LV+ L  IN + VS G  Q   +  SGE+Y WG N+ G    G+RR  S  +PR 
Sbjct: 1   MASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDAS--VPR- 57

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HG---------------- 404
           L   L G  V  VAC + HT      G  + +G    G LG HG                
Sbjct: 58  LVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 117

Query: 405 --------NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
                   +   V  P+ +ESL G  +  VACGP+H+A +     DR         LFT 
Sbjct: 118 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRT-------SLFTC 170

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G    GRLGH D E + LPT V  L + +    +CG   T  +T  G +YT G A  G+L
Sbjct: 171 GLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKL 230

Query: 517 GNPKAKDRSITV--VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN-GQLGLGDS 573
           G    +   +    V G L+ + V  ++ GS H A +T+ G +YTWG+    G    G+S
Sbjct: 231 GLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGES 290

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
            E   P  VEAL    V  VVCG + TA I
Sbjct: 291 DEI-LPRRVEALLGLFVIHVVCGDAHTACI 319



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 180/394 (45%), Gaps = 56/394 (14%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++   ++ + +S G    A+V   GE++ WG   +G+LG     D S P+LV+ L 
Sbjct: 4   PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 63

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWG------HNNHGADL-----VGERRSRSHWLPRK 361
           G  V++V+C +  T      G  Y WG         HG  +     +G     +   P  
Sbjct: 64  GKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 123

Query: 362 L-----------FDTLDGVRVSKVACGEWHTAIVSTSGQ----LFTYGDGTFGVLGHGNL 406
           L            ++L G  ++ VACG +H+A +    Q    LFT G G  G LGHG+ 
Sbjct: 124 LASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDE 183

Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
           ++   P  V +L  + + ++ACG  HTA         C ++A  G L+TWG A  G+LG 
Sbjct: 184 EDRHLPTAVHALENVNITAIACGAHHTA---------CVTSA--GTLYTWGGAAFGKLG- 231

Query: 467 VDGER--KLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYT------MGSAVHGQLG 517
           +   R  +LLP  V+  L +   V  + G   +  +T  G++YT      +G  V G+  
Sbjct: 232 LGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGE-- 289

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ER 576
           + +   R +  + G     FV  +  G  H A +   G+V+ WG +    LG GD +   
Sbjct: 290 SDEILPRRVEALLGL----FVIHVVCGDAHTACIVENGNVWAWGTSR--ILGHGDPEVPP 343

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
             P  + AL  + V  + C S+ T A C  + +S
Sbjct: 344 NRPACLRALNGKGVVQLSCASTFTVAFCDPQRVS 377



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 54/321 (16%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMD------ 301
           DA +P+L+++     V+ ++   +H      +G  + WG   +GRLG H +++       
Sbjct: 52  DASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLG 111

Query: 302 ------------------VSCPKLVECLSGINVQSVSCGEFQTCAL----TKSGEIYTWG 339
                             V  P+++E L G  +  V+CG + +  L         ++T G
Sbjct: 112 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCG 171

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              +G    G+   R   LP  +   L+ V ++ +ACG  HTA V+++G L+T+G   FG
Sbjct: 172 LGLNGRLGHGDEEDR--HLPTAVH-ALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 228

Query: 400 VLGHGNLQNVSQ--PKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            LG G+ +  SQ  PK V   LR   V SVA G  H+A +              G+L+TW
Sbjct: 229 KLGLGSTRG-SQLLPKHVSGPLRNKAVVSVALGSQHSACVT-----------TDGELYTW 276

Query: 457 GDADKGRLGH-VDGER-KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA--- 511
           G     RLGH V GE  ++LP  V  L+    +   CG   T  +   G V+  G++   
Sbjct: 277 GQGR--RLGHEVQGESDEILPRRVEALLGLFVIHVVCGDAHTACIVENGNVWAWGTSRIL 334

Query: 512 VHGQLGNPKAKDRSITVVEGK 532
            HG    P  +   +  + GK
Sbjct: 335 GHGDPEVPPNRPACLRALNGK 355



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 10/194 (5%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKL 307
           D  LP  + +   +++  I+ GA H A VT  G ++ WG    G+LG          PK 
Sbjct: 185 DRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKH 244

Query: 308 VEC-LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH-GADLVGERRSRSHWLPRKLFDT 365
           V   L    V SV+ G   +  +T  GE+YTWG     G ++ GE       LPR++ + 
Sbjct: 245 VSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGE---SDEILPRRV-EA 300

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVK 424
           L G+ V  V CG+ HTA +  +G ++ +  GT  +LGHG+ +   ++P  + +L G  V 
Sbjct: 301 LLGLFVIHVVCGDAHTACIVENGNVWAW--GTSRILGHGDPEVPPNRPACLRALNGKGVV 358

Query: 425 SVACGPWHTAAIVD 438
            ++C    T A  D
Sbjct: 359 QLSCASTFTVAFCD 372


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 191/423 (45%), Gaps = 34/423 (8%)

Query: 214 RKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKH 273
           +  ++  ++ WG    G    G +D  +         L P+  +  V   V+++  G +H
Sbjct: 3   KTKVIPSMLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRH 54

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
              V  +G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G
Sbjct: 55  TVFVLDDGTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHTLALNDKG 112

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++Y WG ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +
Sbjct: 113 QVYAWGLDSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCW 170

Query: 394 GDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           G   +G LG G + Q  + P+ ++SL G+    VA G  H+  +            + G 
Sbjct: 171 GQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGA 219

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +F WG    G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  
Sbjct: 220 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLG 571
           +GQLG+             +L    V  ++ G  H  A + S G +Y++G   NGQLG G
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 339

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPF 624
            +  R++P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P 
Sbjct: 340 STSNRKSPFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPD 397

Query: 625 GFR 627
            FR
Sbjct: 398 DFR 400


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 187/418 (44%), Gaps = 39/418 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
           +P  V+   +    +  C   I +    C+ +  S GDQS        F     + NC
Sbjct: 337 SPFTVKG--NWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS--------FSHYSNRQNC 384


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKG--NWFPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F++G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G +    + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 152/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F+WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFSWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D  ++  P  +  L    F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 29/363 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V     + +  L K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK--------TVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T  L   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGF 110

Query: 341 NNHG-ADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
              G   L G E  +R   +PR +  +L  V++ +VACG +H+  +S   ++F++G    
Sbjct: 111 AADGQLGLPGTEEYTR---VPRNI-KSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166

Query: 399 GVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG G +L+  + P+ ++SL G+    +A G  H+ A+            + G +F WG
Sbjct: 167 GQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFAL-----------TLSGAVFGWG 215

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG  D   + +P  +  L     V  SCG   T  LT  G V+T G+  +GQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +             +L    V  I+ G  H  A + S G +Y++G   NGQLG+G +  R
Sbjct: 276 HNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNR 335

Query: 577 ETP 579
           ++P
Sbjct: 336 KSP 338



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 20/326 (6%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ +V   P+         V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G    G 
Sbjct: 61  NDLGQ--LGHEKSRKR--PEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115

Query: 401 LG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  G  +    P+ ++SL  +++  VACG +H+ A+           + G ++F+WG  
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL-----------SKGSEVFSWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   D +++  P  +  L+   F Q + G   +  LT  G V+  G    GQLG 
Sbjct: 165 KHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               DR +  +   L+ + +  IS G  H A LT  G V+T+G    GQLG   +     
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEIN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAIC 604
           P  V  L    V  + CG   T+A  
Sbjct: 285 PRKVFELMGNIVTQIACGRQHTSAFV 310



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L++S + +    I+ G  H+  +T  G VF WG  K G+LG     D   P L++ L 
Sbjct: 181 PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLR 240

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  +SCGE  T ALTK G ++T+G   +G   +G   +     PRK+F+ +  + V+
Sbjct: 241 SQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSTGHEINPRKVFELMGNI-VT 297

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
           ++ACG  HT A V ++G+++++G G  G LG G+  N   P  V+
Sbjct: 298 QIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 187/418 (44%), Gaps = 39/418 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
           +P  V+   +    +  C   I +    C+ +  S GDQS        F     + NC
Sbjct: 337 SPFTVKG--NWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS--------FSHYSNRQNC 384


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 187/418 (44%), Gaps = 39/418 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQSSCSQCRMPFGFRRKKHNC 633
           +P  V+   +    +  C   I +    C+ +  S GDQS        F     + NC
Sbjct: 337 SPFTVKG--NWFPYTGQCPPDIDSEEYFCVKRIFSGGDQS--------FSHYSNRQNC 384


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG  H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 182/387 (47%), Gaps = 27/387 (6%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           L +V +WG         GA         T+V  + P+L+ S  + DVQ +  G     ++
Sbjct: 341 LSEVFMWGSNSSNQHAEGA---------TEVTDI-PRLVRS--LSDVQQVEAGQYCTFII 388

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG-EFQTCALTKSGEIY 336
             +G V   G+   GRLG   + +   PK +     I   S S G +  + AL+ +GE+Y
Sbjct: 389 DTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVY 448

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           +WG  ++G   +G     +H  P+ +     G  +  V+ G  H+A V++ GQL+T+G+G
Sbjct: 449 SWGDGDYGK--LGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEG 506

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             G LGHG+      P  V+SL  + V  VACG  HT A        C  +  G  ++++
Sbjct: 507 DHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLA--------CSRD--GNTVWSF 556

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G  D G+LGH +  R   P  +  L  +   + + G   +V LT  G+V+T G   +   
Sbjct: 557 GSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGC 616

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G+ +    S  VVE  L ++ +  IS G  H   LT   +VY WG N  GQ G G S   
Sbjct: 617 GSSEITLFSPAVVE-DLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSP 675

Query: 577 ET-PTFVEALRDRQVESVVCGSSITAA 602
            + P+ V  L  +Q+  +  G+S + A
Sbjct: 676 VSRPSKVINLEGKQINQISAGTSHSVA 702



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 182/386 (47%), Gaps = 27/386 (6%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
            D  +WG G   G +G   D +V Q    ++   P  +++  +   Q I  G     ++T 
Sbjct: 3393 DAYLWGNG-RNGQLG---DTAVGQ---CINIWSPIKIQNFKI--AQRIVCGQNCTFVLTS 3443

Query: 280  EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG---EFQTCALTKSGEIY 336
            +G V   GEG  GRLGH  +  +    ++  L G  +  VS     +  + ALT++GE++
Sbjct: 3444 QGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVF 3503

Query: 337  TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            +WG  + G   +G   +     P KL ++L  V V +VACG  H+A++S  G+++ +G  
Sbjct: 3504 SWGDGDFGK--LGHGNNERQRKP-KLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSA 3560

Query: 397  TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              G LG G   N  +P ++     L +K +ACG  HT  I + +V            + +
Sbjct: 3561 EHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGENVV------------WAF 3608

Query: 457  GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            G+ + G+LG    +   +P  +  L   +  +A CG   T+ L+  G++Y+ GS      
Sbjct: 3609 GEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDA 3668

Query: 517  GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             +    ++ I     + + + V  +++G  HV VLT+ G V+ WG N  G LG G     
Sbjct: 3669 TDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPV 3728

Query: 577  ETPTFVEALRDRQVESVVCGSSITAA 602
            + P  ++ L D+ ++ +    +  AA
Sbjct: 3729 QKPMIIQILSDKNIKQIATSRTHCAA 3754



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 176/377 (46%), Gaps = 22/377 (5%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
           V  LL K L S     V    L    A L     EVF WG     +           P+L
Sbjct: 309 VALLLMKKLVSFGETSVVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEGATEVTDIPRL 368

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           V  LS  +VQ V  G++ T  +   G +   G N++G   +G   S +  +P+++     
Sbjct: 369 VRSLS--DVQQVEAGQYCTFIIDTKGCVSACGKNSYGR--LGLGNSSNQPVPKRININCK 424

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSV 426
             +VS     + H+  +S +G+++++GDG +G LGHG++    +PK ++    G  ++ V
Sbjct: 425 IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIELV 484

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           + G  H+AA+              G+L+TWG+ D GRLGH D   + +PT V  L D   
Sbjct: 485 SAGYRHSAAVTS-----------DGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPV 533

Query: 487 VQASCGRMLTVGLTGLGK-VYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGISSG 544
              +CG   T+  +  G  V++ GS  +G+LG+    +      +EG L+   +K +++G
Sbjct: 534 GYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEG-LRHYKIKKVAAG 592

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +    LT  G V+TWG+ +N  LG G S+    +P  VE L  + +  +  G S   A+
Sbjct: 593 IHFSVALTCTGEVFTWGQGSN--LGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLAL 650

Query: 604 CLHKSISVGDQSSCSQC 620
             + ++     +   QC
Sbjct: 651 TRNCAVYAWGSNGKGQC 667



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 24/291 (8%)

Query: 268  SLGAK-HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
            S+G+  H+  +T+ GEVF WG+G  G+LGH  N     PKL+E L  + V  V+CG   +
Sbjct: 3486 SIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHS 3545

Query: 327  CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              L++ GE+Y +G   HG   +G   ++    P K+      + +  +ACG+ HT  +  
Sbjct: 3546 AVLSQDGEVYVFGSAEHGKLGLGGHINKKR--PTKIVHK-GFLNIKYIACGQNHTICIG- 3601

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
               ++ +G+G  G LG G+ +++  P+E+ +L G  +K   CG   T  + +        
Sbjct: 3602 ENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSE-------- 3653

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
                G+L++ G  +      V    KL+P  +           + G    + LT  G V+
Sbjct: 3654 ---DGELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVW 3710

Query: 507  TMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
              G+   G LG     P  K   I +    L ++ +K I++   H A  T+
Sbjct: 3711 AWGNNCEGILGFGHDLPVQKPMIIQI----LSDKNIKQIATSRTHCAAWTA 3757



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 27/228 (11%)

Query: 391  FTYGDGTFGVLGH---GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            + +G+G  G LG    G   N+  P ++++ +    + + CG   T  +           
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIKIQNFK--IAQRIVCGQNCTFVLTS--------- 3443

Query: 448  AIGGKLFTWGDADKGRLGHVDGERKLLP--TCVTRLVDFDFVQASCG---RMLTVGLTGL 502
               G + + G+ + GRLGH  G    LP  T ++ L  F   Q S        ++ LT  
Sbjct: 3444 --QGTVLSCGEGNYGRLGH--GHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTET 3499

Query: 503  GKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+V++ G    G+LG+    + R   ++E  L +  V  ++ G  H AVL+  G VY +G
Sbjct: 3500 GEVFSWGDGDFGKLGHGNNERQRKPKLIES-LYDVVVIQVACGHKHSAVLSQDGEVYVFG 3558

Query: 562  KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
               +G+LGLG    ++ PT +       ++ + CG + T  IC+ +++
Sbjct: 3559 SAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHT--ICIGENV 3604


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKG--NWFPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG  H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   LVG        +PR +  +L  +++ +VACG  H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLVGSEECIR--VPRNI-KSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 337 SPFTVKG--NWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 168/340 (49%), Gaps = 43/340 (12%)

Query: 264 VQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL---SGIN--VQ 317
           + NIS G  H+ A  T+  +V+CWG G+ G+LG+K + D+  P++   L    GI   + 
Sbjct: 93  INNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQWEIS 152

Query: 318 SVSCGEFQTCALTKS---------GEIYTWGHNNHGADLVGERRSRSHWLPRKLF---DT 365
            +SCGE  T A+ K           ++Y WG ++     +G    ++ ++ + L    D 
Sbjct: 153 EISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQ--LGIDTGKTDYVNQPLEMSPDY 210

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVESLRGLKVK 424
            +G   S  AC ++  AI    G++F++G G F  LG+   + N   P ++ESL   ++ 
Sbjct: 211 WEGNVESVKACSDFTIAI-DKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESLSKQQII 269

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
             + G +H+AAI +            G+L+TWG    G+LGH   +  + P  V  L + 
Sbjct: 270 QFSLGSFHSAAITN-----------NGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNT 318

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKD-RSITVVEGKLKEEFVK 539
             V  +CG   T+ L+   ++++ G    GQLG    N K+ D + I+  E K     +K
Sbjct: 319 YIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKS----IK 374

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERET 578
            I+ GS H  VL   G+VY+WG N  GQLG   DS  + T
Sbjct: 375 QIACGSKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNT 414



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 53/324 (16%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE-----SAVMLDVQNISLGAK 272
           L  V  WG G  G  +G         NK   D   P++         +  ++  IS G  
Sbjct: 110 LNQVYCWGIGEYG-KLG---------NKESKDLQYPEIFNGLKQPEGIQWEISEISCGEN 159

Query: 273 HAALVTKE---------GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI---NVQSV- 319
           H   V K+          +++ WG   D +LG          + +E        NV+SV 
Sbjct: 160 HTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVK 219

Query: 320 SCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           +C +F T A+ K G I++WG        + A++V ++       P ++ ++L   ++ + 
Sbjct: 220 ACSDF-TIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKH------PLQI-ESLSKQQIIQF 271

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           + G +H+A ++ +G+L+T+G  + G LGHG  +    PKEV++L+   + SVACG  HT 
Sbjct: 272 SLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTL 331

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGR 493
           A+        K+N    +LF+WG    G+LG      K   P  ++   D    Q +CG 
Sbjct: 332 AL-------SKNN----ELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKSIKQIACGS 380

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLG 517
             ++ L   G VY+ GS  +GQLG
Sbjct: 381 KHSLVLLQDGTVYSWGSNQYGQLG 404



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 48/334 (14%)

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           V  P L+  +S  N+  + CG   + A+  + E+Y WG N      +G +   S     +
Sbjct: 18  VQTPHLISDIS--NIVKIVCGANHSYAIDTNFEVYAWGCN------LGRKLGLSDEYYNQ 69

Query: 362 LFDT--------------LDGVRVSKVACGEWHTAIVSTS-GQLFTYGDGTFGVLGHGNL 406
           +F                L   +++ ++ G  H+   ST   Q++ +G G +G LG+   
Sbjct: 70  IFQADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKES 129

Query: 407 QNVSQPKEVESLRGLK--------VKSVACGPWHTAAIV-DIMVDRCKSNAIGGKLFTWG 457
           +++  P   E   GLK        +  ++CG  HT A++  I V+  +S     KL+ WG
Sbjct: 130 KDLQYP---EIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQ---NKLYVWG 183

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDF-----DFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +   +LG   G+   +   +    D+     + V+A C    T+ +   G++++ G   
Sbjct: 184 SSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKA-CSD-FTIAIDKQGRIFSWGKGG 241

Query: 513 HGQLGNPK--AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
             +LG        +    +E   K++ ++  S GS+H A +T+ G +YTWG+++NGQLG 
Sbjct: 242 FNRLGYKAEIVNQKHPLQIESLSKQQIIQ-FSLGSFHSAAITNNGRLYTWGRDSNGQLGH 300

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           G ++    P  V+AL++  + SV CG   T A+ 
Sbjct: 301 GQAKADIFPKEVQALQNTYIVSVACGEGHTLALS 334



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 49/364 (13%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG-----------HKVNMDVSCPKLVECLSGIN 315
           I  GA H+  +    EV+ WG     +LG             +   +  P  V  LS   
Sbjct: 33  IVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTELSNKK 92

Query: 316 VQSVSCGEFQTCAL-TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL---DGVR- 370
           + ++S G   + A  T+  ++Y WG   +G   +G + S+    P ++F+ L   +G++ 
Sbjct: 93  INNISTGTNHSFAWSTELNQVYCWGIGEYGK--LGNKESKDLQYP-EIFNGLKQPEGIQW 149

Query: 371 -VSKVACGEWHTAIV---------STSGQLFTYGDGTFGVLG--HGNLQNVSQPKEV--E 416
            +S+++CGE HT  V          +  +L+ +G  +   LG   G    V+QP E+  +
Sbjct: 150 EISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPD 209

Query: 417 SLRGLKVKSV-ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLL 474
              G  V+SV AC  +       I +D+       G++F+WG     RLG+  +   +  
Sbjct: 210 YWEG-NVESVKACSDF------TIAIDK------QGRIFSWGKGGFNRLGYKAEIVNQKH 256

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
           P  +  L     +Q S G   +  +T  G++YT G   +GQLG+ +AK          L+
Sbjct: 257 PLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQ 316

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESV 593
             ++  ++ G  H   L+    +++WG N++GQLG      + + P  +    D+ ++ +
Sbjct: 317 NTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKSIKQI 376

Query: 594 VCGS 597
            CGS
Sbjct: 377 ACGS 380


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 27/329 (8%)

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECL--SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
           G G  GRLGH        P LV+ L   GI  +SV CG F +  ++  G++YT G    G
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKG 131

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
              +G + ++++     L D L  ++V++V     H+ +V++ GQ++++G    G LGHG
Sbjct: 132 --FLGHK-NQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHG 188

Query: 405 NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           +      P  +E LRG KV    C   H A + D            G++F WG    G+L
Sbjct: 189 DDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD-----------AGQVFMWGSGTDGKL 237

Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
           G  D E    P  V  L         CG      +   G ++T G  + G+LG+   ++R
Sbjct: 238 GQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENR 297

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
           ++  +   L E  ++ I+ G+ H+A ++    +YTWGKNA GQLG GD  +R  PT V  
Sbjct: 298 TVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVAT 357

Query: 585 L----------RDRQVESVVCGSSITAAI 603
           L          R R V  V CG++ TA++
Sbjct: 358 LLLAPSEDAPPRGR-VAKVSCGANHTASL 385



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 23/301 (7%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           +  +++  G  H+ +++ +G+V+  G G  G LGHK   ++    LV+ L+ + V  V  
Sbjct: 101 IKAKSVVCGYFHSMVISSKGQVYTCGRGYKGFLGHKNQNNIRSFLLVDALASLKVTQVCA 160

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
               +  +T  G++Y++G   HG    G+   R   LP  + + L G +V +  C   H 
Sbjct: 161 ARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYRR--LP-TMIEGLRGKKVVQTTCFGAHN 217

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A+++ +GQ+F +G GT G LG G+ ++   P  V +L G  +KS+ CG    AAI     
Sbjct: 218 AVLTDAGQVFMWGSGTDGKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAI----- 272

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                  + G LFTWG    GRLGH D E + +P+ VT L +      +CG      ++ 
Sbjct: 273 ------NVEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISD 326

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL---------KEEFVKGISSGSYHVAVLT 552
           +  +YT G    GQLG+    DR    V   L             V  +S G+ H A L 
Sbjct: 327 MNVLYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLV 386

Query: 553 S 553
           S
Sbjct: 387 S 387



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 16/240 (6%)

Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           +N+  + + L  L+++   L V  +     H+ +VT +G+V+ +G  K GRLGH  +   
Sbjct: 136 KNQNNIRSFL--LVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHGDDAYR 193

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
             P ++E L G  V   +C       LT +G+++ WG    G   +G+  + SH+ P  L
Sbjct: 194 RLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGK--LGQGDNESHFAP-VL 250

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L+G  +  + CG    A ++  G LFT+G G  G LGHG+ +N + P  V +L  + 
Sbjct: 251 VRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVP 310

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           ++++ACG  H AAI D+ V           L+TWG   +G+LGH D   +  PT V  L+
Sbjct: 311 IRAIACGAGHMAAISDMNV-----------LYTWGKNAEGQLGHGDRHDRHGPTVVATLL 359



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 29/331 (8%)

Query: 283 VFCWGE----GKDGRLGHKVNMDVSCPKLVECLSGINVQSVS------CGEFQTCALTKS 332
           ++ WG+    G++    H    D+ CP L+   +  +  + S       G+    +    
Sbjct: 13  LYTWGDQSLIGREASEDHPA--DLPCPVLLHVGAEPSASTSSRTGAQIPGDGAAISTISL 70

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           G + + G   HG     ER+ R   L + L     G++   V CG +H+ ++S+ GQ++T
Sbjct: 71  GGLGSTGRLGHGD----ERKYRDPTLVQSLHK--QGIKAKSVVCGYFHSMVISSKGQVYT 124

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            G G  G LGH N  N+     V++L  LKV  V     H+  +              G+
Sbjct: 125 CGRGYKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTS-----------DGQ 173

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           ++++G    GRLGH D   + LPT +  L     VQ +C       LT  G+V+  GS  
Sbjct: 174 VYSFGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGT 233

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            G+LG    +     V+   L+ + +K I  G    A +   G ++TWG    G+LG GD
Sbjct: 234 DGKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGD 293

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            + R  P+ V AL +  + ++ CG+   AAI
Sbjct: 294 EENRTVPSLVTALAEVPIRAIACGAGHMAAI 324



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 14/196 (7%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP ++E      V   +    H A++T  G+VF WG G DG+LG   N     P LV  L
Sbjct: 195 LPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHFAPVLVRAL 254

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            G  ++S+ CG     A+   G ++TWGH   G    G+  +R+  +P  L   L  V +
Sbjct: 255 EGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRT--VP-SLVTALAEVPI 311

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL----------RGL 421
             +ACG  H A +S    L+T+G    G LGHG+  +   P  V +L          RG 
Sbjct: 312 RAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG- 370

Query: 422 KVKSVACGPWHTAAIV 437
           +V  V+CG  HTA++V
Sbjct: 371 RVAKVSCGANHTASLV 386


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 33/304 (10%)

Query: 262 LDVQNISL---GAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQ 317
           LD Q I+L   G  H+  V ++G+VF WG G++G+LG       V  P+L++ L    + 
Sbjct: 80  LDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIA 139

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF----DTLDGVRVSK 373
            V CG     AL+K G+++TWG N  G   +G+        P KLF     +L G+ ++K
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE------PSKLFPQPLKSLAGIPLAK 193

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +  G  H+  +S SG +F +G    G LG  ++Q+ + P  ++ LR  KV  ++CG  HT
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHT 253

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
           AA+              G LFT+GD   G+LGH     +LLP  V  L+  +  Q +CGR
Sbjct: 254 AALTK-----------DGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGR 302

Query: 494 MLTVGLT-GLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
             T+      G VY  G   HGQLG    + D+S       LK  F+ G   G+  V  +
Sbjct: 303 HHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKS----PYPLKTSFLSGSIHGT--VTKI 356

Query: 552 TSGG 555
           T GG
Sbjct: 357 TCGG 360



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 19/324 (5%)

Query: 283 VFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           + CWG+ KDG+LG  V  + +  P+     +G  ++ + CG   +  L   G +YT G N
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           + G   +G  +     +  +    LD  +++ V+CG+ H+  V+  GQ+F +G G  G L
Sbjct: 61  SCGQ--LGHNKPG---ITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQL 115

Query: 402 GHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G G  +  V  P+ ++ L   ++  V CG  H           C + +  G+LFTWG   
Sbjct: 116 GLGTTETAVRIPRLIKRLCDHRIAQVMCGNQH-----------CIALSKDGQLFTWGQNT 164

Query: 461 KGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            G+LG   GE  KL P  +  L      + + G   +  L+  G V+  G    GQLG  
Sbjct: 165 SGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLN 224

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
             +DR++      L+ + V  IS G  H A LT  G ++T+G  + GQLG G +     P
Sbjct: 225 DIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLP 284

Query: 580 TFVEALRDRQVESVVCGSSITAAI 603
             V  L   +V  + CG   T A 
Sbjct: 285 RRVLELMGTEVSQITCGRHHTLAF 308



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 157/340 (46%), Gaps = 22/340 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ I  G +H+  +  +G V+  G    G+LGH  N     P+ V  L    +  VSCG+
Sbjct: 35  LKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGH--NKPGITPEFVGALDTQKITLVSCGQ 92

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A+ + G+++ WG    G   +G   +    +PR L   L   R+++V CG  H   
Sbjct: 93  AHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVR-IPR-LIKRLCDHRIAQVMCGNQHCIA 150

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +S  GQLFT+G  T G LG G  +     P+ ++SL G+ +  +  G  H+ A+      
Sbjct: 151 LSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFAL------ 204

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG    G+LG  D + + +P  +  L     V  SCG   T  LT  
Sbjct: 205 -----SLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKD 259

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G ++T G    GQLG+    +  +     +L    V  I+ G +H +A   S G VY +G
Sbjct: 260 GGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFG 319

Query: 562 KNANGQLGLGDSQERETP-----TFVEALRDRQVESVVCG 596
            N++GQLG G     ++P     +F+       V  + CG
Sbjct: 320 CNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCG 359



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +    T+    +P+L++      +  +  G +H   ++K+G++F WG+   G+
Sbjct: 108 GAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQ 167

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K       P+ ++ L+GI +  ++ G   + AL+ SG ++ WG N  G   + + +
Sbjct: 168 LGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQ 227

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R+  +P  +   L   +V  ++CGE HTA ++  G LFT+GDG++G LGHG+  N   P
Sbjct: 228 DRA--VPCHI-KFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLP 284

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  + CG  HT A               G ++ +G    G+LG
Sbjct: 285 RRVLELMGTEVSQITCGRHHTLAFA----------PSSGGVYAFGCNSHGQLG 327


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 176/394 (44%), Gaps = 57/394 (14%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ I+ G  H+  +T++ ++  WG+G+ GRLGH    DV  PK +  LS      +S GE
Sbjct: 346 IEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGE 405

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A+++   +YTWG   +G   +G     S   P KL + LD   +  V+CG +HT  
Sbjct: 406 SHSAAISEKLNLYTWGTGTYGR--LGHGMDTSEKKP-KLIEDLDQYEIIHVSCGAFHTLA 462

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQN---VSQPKEVESLR-GLKVKSVACGPWHTAAIVDI 439
           ++  G ++ +G G +G LG    Q     S+P+++   + G++ + +     + A +   
Sbjct: 463 ITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAA 522

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL------------------ 481
             +     A  GK+++WG   KG LG   G  + LP  + ++                  
Sbjct: 523 GYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRG 582

Query: 482 -------VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-------------- 520
                    ++ +Q +CG + TV LT  G+VY  GS  +GQL   K              
Sbjct: 583 DLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQN 642

Query: 521 -------AKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
                  A D S  +   K   E    +  I+ G  H+  ++    ++ WG+N  GQLGL
Sbjct: 643 NNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGL 702

Query: 571 GD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  S     PT +  +  + ++ + CG + +AA+
Sbjct: 703 GFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAV 736



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 67/364 (18%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK--LVECLS-GINVQSVS 320
           +  ++ G+ H   +T++ E+F WG G+ G LG     D+  P+  ++E       ++ ++
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIA 350

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           CG++ +  LT+  +I TWG    G   +G        +P++++D L   +   ++ GE H
Sbjct: 351 CGKYHSMCLTRKKKILTWGQGQGGR--LGHGDEDDVLVPKEIYD-LSKKKPIFISAGESH 407

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +A +S    L+T+G GT+G LGHG   +  +PK +E L   ++  V+CG +HT AI    
Sbjct: 408 SAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITG-- 465

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF-------------- 486
                     G ++ +G    G+LG     RK      +R     F              
Sbjct: 466 ---------QGTVYAFGQGKYGKLGI---NRKQREGVFSRPEKISFYKVGVEPQEMLVQD 513

Query: 487 ----VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
               + A+ G   ++ L   GK+Y+ G    G LG  K  +  + +  G++  E +  I 
Sbjct: 514 KNEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIP 573

Query: 543 S-------------------------GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
           +                         G  +   LT+GG VY +G NA GQL    +++++
Sbjct: 574 NIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQL----AKDKD 629

Query: 578 TPTF 581
             TF
Sbjct: 630 QTTF 633



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/462 (22%), Positives = 189/462 (40%), Gaps = 107/462 (23%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           ++  WG G  G  +G  +D S  +         PKL+E     ++ ++S GA H   +T 
Sbjct: 416 NLYTWGTGTYG-RLGHGMDTSEKK---------PKLIEDLDQYEIIHVSCGAFHTLAITG 465

Query: 280 EGEVFCWGEGKDGRLGHKVNMD-----VSCPKLVECLS-GINVQSV-----------SCG 322
           +G V+ +G+GK G+LG  +N        S P+ +     G+  Q +           + G
Sbjct: 466 QGTVYAFGQGKYGKLG--INRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAG 523

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-------------FDTLD-- 367
              +  L KSG+IY+WG+N  G  L+G ++     LP ++              D L   
Sbjct: 524 YNHSLCLAKSGKIYSWGYNGKG--LLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQR 581

Query: 368 ---------GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV--------- 409
                       V +VACG  +T  ++  G+++ +G   +G L     Q           
Sbjct: 582 GDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQ 641

Query: 410 ------------SQPKEVESLRG---LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
                       S+   +    G   +++  +ACG  H  AI  +            +LF
Sbjct: 642 NNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRM-----------NELF 690

Query: 455 TWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            WG  D+G+LG     +    PT + ++   +    +CG   +  ++  G+++  G+  +
Sbjct: 691 GWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLEN 750

Query: 514 GQLGNPKAKDR----SITVVEGKLKEEFVKGISSGSYHVAVLTS--------GGSVYTWG 561
           G+LG  +A  +    S T+++       +K ++ G  H+  +           G  Y+WG
Sbjct: 751 GKLGLGQALKKGFLLSFTLIQNLAP---IKSVACGPNHMLAIADYNPDHPIKDGMCYSWG 807

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +N  GQLG+G  ++   P  +   ++R  + V CG   +  +
Sbjct: 808 RNWKGQLGIGSKEDSNVPKKIHNAKER-FKKVACGQDFSIGL 848



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 29/255 (11%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV---ESLRGLKVKSVA 427
           +++VACG  H   ++   +LF++G G +G LG G   ++ +P+ +   +      ++ +A
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIA 350

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG +H+  +      R K      K+ TWG    GRLGH D +  L+P  +  L     +
Sbjct: 351 CGKYHSMCLT-----RKK------KILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPI 399

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSY 546
             S G   +  ++    +YT G+  +G+LG+     ++   ++E   + E +  +S G++
Sbjct: 400 FISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIH-VSCGAF 458

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQER------ETPTFV-------EALRDRQVESV 593
           H   +T  G+VY +G+   G+LG+   Q        E  +F        E L   + E++
Sbjct: 459 HTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAI 518

Query: 594 VCGSSITAAICLHKS 608
           +  +    ++CL KS
Sbjct: 519 LAAAGYNHSLCLAKS 533



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 153/346 (44%), Gaps = 41/346 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCG 322
           +  I+ G +H   +++  E+F WG   +G+LG     D +  P L+  ++  N+Q ++CG
Sbjct: 670 INYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACG 729

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + A++  GE++  G+  +G   +G+   +   L   L   L  ++   VACG  H  
Sbjct: 730 DNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIK--SVACGPNHML 787

Query: 383 IVST--------SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
            ++          G  +++G    G LG G+ ++ + PK++ + +  + K VACG   + 
Sbjct: 788 AIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKE-RFKKVACGQDFSI 846

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGD----ADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            +             G +++ WG+     D      VD     +P  +  L        +
Sbjct: 847 GL-----------TYGNQVYLWGNNKYFCDSKITKDVD-----IPQLLQALEQAQIKDIA 890

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR------SITVVEGKLKEEFVKGISSG 544
           C       L   G++   GS +  ++   + KD+      +IT    +  +  ++ IS+G
Sbjct: 891 CSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAG 950

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET---PTFVEALRD 587
             H A ++   S+YTWG    G+LGL + + +     P  V+++ D
Sbjct: 951 QNHSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHD 996



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLG--LGDSQERETPTFVE---ALRDRQVESVVC 595
           IS+G  H A++   G++Y WG N N QL     D    E P  V+     ++ + +SVVC
Sbjct: 7   ISAGFSHSAIINQKGNLYVWGDNKNQQLTSYFSDQTILERPGHVKLKYKTQEYKAKSVVC 66

Query: 596 GSSITAAICLHKSISV 611
           G + T  I  +K  +V
Sbjct: 67  GPTYTFVIAQNKQNTV 82



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 6/106 (5%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--- 301
           K   D  +P+LL++     +++I+   K  +++  +GE+  WG     R+      D   
Sbjct: 867 KITKDVDIPQLLQALEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKS 926

Query: 302 ---VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
              ++  K         ++++S G+  + A++    +YTWGH   G
Sbjct: 927 QNHLAITKFPMRKFDFLMETISAGQNHSAAVSVKRSLYTWGHAEGG 972


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 200/436 (45%), Gaps = 48/436 (11%)

Query: 211 LIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLG 270
           L E    +  +  WG   LG   G   D    QN T      P+ +++    DV + + G
Sbjct: 29  LPELPPAVSSLYTWGRSDLG-QTGSGRD----QNSTA-----PEPVQALQGKDVVHAAGG 78

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
           + ++A VT++GE++  G     +LG K       P  V  L   NV  V+CG+    A+ 
Sbjct: 79  SYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVV 138

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
            +G +  WG N +G    GE  + S   PR L   + G   ++VA G  H+  +++SGQ+
Sbjct: 139 DNGHLAAWGSNEYGQLGTGEVGA-SAAQPRVL-KRIRGAHFARVAAGATHSLALTSSGQV 196

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +++G+G+FG LGHG++ N ++P  V++L    + S+A G + +AA+           ++ 
Sbjct: 197 YSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAV-----------SLS 245

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G++FTWG    G+LG+ +     LP  V  +     VQ +CG    + LT  G+VYT G 
Sbjct: 246 GRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIE--QAVQVACGDHHCIALTRWGEVYTWGL 303

Query: 511 AVHGQLGNPKAKDRSITVVEG---------KLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
              GQLG  +  +     + G          L ++ ++ +S+G+ H   ++ G  ++  G
Sbjct: 304 HSSGQLG--QGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAG 361

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            N  GQL L        PT V  L    +   V             SI+V D+SS  Q  
Sbjct: 362 ANDEGQLALQSVPSVALPTRVPGLPGLPMRFAVAAGD--------HSIAVLDESSGLQNG 413

Query: 622 MPFGF-RRKKHNCYNC 636
              G  RR    C +C
Sbjct: 414 ---GLQRRTSGPCRSC 426


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 188/417 (45%), Gaps = 36/417 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           +P  V+   +    +  C   I +    C+ +  S GDQ     S+   C  P  FR
Sbjct: 337 SPFTVKG--NWFPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHYSNPQNCGPPDDFR 391


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 27/369 (7%)

Query: 219 KDVMIWGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           K++  WG  + G   +GG  D ++         L+P+ L+     +++ I+ G  +  L+
Sbjct: 76  KNMFCWGSTIHGELGLGGIEDENI---------LVPRELDFQKATEIEQIACGENYTVLI 126

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T++G+V+  G    G+LGH+        +L+  L     + V+CG   T A+ + G++++
Sbjct: 127 TRDGQVYSCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKVACGAHHTLAVNEWGQLFS 184

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N  G  L    ++    +P  +   L    V +VACG  H   ++ +G+L+++G  +
Sbjct: 185 WGSNAEG-QLGLNSKNLIECVPH-MVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNS 242

Query: 398 FGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LG G +++N  +PK + SL G+ +  + CG +H+ AI           +  G +F W
Sbjct: 243 DGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAI-----------SKSGAVFGW 291

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G    G+LG  D   + LP  +  L +     A+CG   +V LT  G V+T G+ ++GQL
Sbjct: 292 GKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 351

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G+    +  +     +L    V  IS G  H + ++ S G VY WG    GQLG   ++ 
Sbjct: 352 GHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRS 411

Query: 576 RETPTFVEA 584
             TP  V  
Sbjct: 412 VATPQVVHG 420



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 148/326 (45%), Gaps = 22/326 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +FCWG    G LG     D  +  P+ ++      ++ ++CGE  T  +T+ G++Y+ G+
Sbjct: 78  MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G   +G  + R      +L   LD     KVACG  HT  V+  GQLF++G    G 
Sbjct: 138 NDYGQ--LGHEKGRKRL---QLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQ 192

Query: 401 LGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           LG  N +N+ +  P  V +L    V  VACG  H  A+ +            GKL++WG 
Sbjct: 193 LGL-NSKNLIECVPHMVRALGTSVVVQVACGINHVLALTN-----------NGKLYSWGS 240

Query: 459 ADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              G+LG   D + ++ P  ++ L        +CG   ++ ++  G V+  G    GQLG
Sbjct: 241 NSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLG 300

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               ++R++      L+   V   + G      LT  G V+T G    GQLG G++    
Sbjct: 301 LNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEI 360

Query: 578 TPTFVEALRDRQVESVVCGSSITAAI 603
            P  V  L    V  + CG   T  +
Sbjct: 361 LPRQVMELMGSTVTQISCGKRHTLGL 386


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 34/416 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G + Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D    Q +T      P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V++VACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 167/343 (48%), Gaps = 38/343 (11%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I+ G +H AL+T+ G++F +G    G+LG    + V+ P  V+ L    VQ V+CG   T
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G++Y  G N+ G   +G+   R+ +     FD+   +++  +A G   +A ++ 
Sbjct: 101 LICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKM--LAAGSNTSAALTV 158

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG+LF +GD T G +G G    VS P+EV    G  +  V+CG +H+A +          
Sbjct: 159 SGKLFMWGDNTEGQIGLGKESQVSSPQEVSV--GQPISWVSCGYYHSALVT--------- 207

Query: 447 NAIGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
             + G L+T+G+ D G+LG     + G R  +P  V  + +    Q +CG   TV L   
Sbjct: 208 --VDGALYTFGERDSGKLGLGTHQLPGHR--VPQLVKSIKE-PVRQVACGGGHTVAL-AE 261

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEG---KLKEEFVKG----ISSGSYHVAVLTSGG 555
           G VYT G    GQLG+         + E    +L E F KG    +  G  H AV+T  G
Sbjct: 262 GNVYTFGLGQFGQLGH------GTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDG 315

Query: 556 SVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
            +YT+G   +G+LGLG+     +  PT         V+  +CG
Sbjct: 316 LLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCG 358



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 36/282 (12%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           + +SG ++T+G +    ++  +      WL   +          ++ACG+ HTA+++ +G
Sbjct: 9   IPESGAVFTFGKSKFADNIPSK-----FWLKNDI--------PLRIACGDEHTALITENG 55

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +LF +G   +G LG G+   V++P  V++L+  KV+ VACG  HT          C +  
Sbjct: 56  KLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLI--------CTAK- 106

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD----FVQASCGRMLTVGLTGLGK 504
             GK++  G   +G+LG  D E +   T   RL  FD        + G   +  LT  GK
Sbjct: 107 --GKVYASGGNSEGQLGLGDCEER---TSFKRLDFFDSQGPIKMLAAGSNTSAALTVSGK 161

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           ++  G    GQ+G    K+  ++  +     + +  +S G YH A++T  G++YT+G+  
Sbjct: 162 LFMWGDNTEGQIG--LGKESQVSSPQEVSVGQPISWVSCGYYHSALVTVDGALYTFGERD 219

Query: 565 NGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAIC 604
           +G+LGLG  Q      P  V+++++  V  V CG   T A+ 
Sbjct: 220 SGKLGLGTHQLPGHRVPQLVKSIKE-PVRQVACGGGHTVALA 260



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 28/261 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
           VQ ++ G  H  + T +G+V+  G   +G+LG        S  +L    S   ++ ++ G
Sbjct: 90  VQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAG 149

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              + ALT SG+++ WG N  G   +G+    S   P+++     G  +S V+CG +H+A
Sbjct: 150 SNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSS--PQEVS---VGQPISWVSCGYYHSA 204

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +V+  G L+T+G+   G LG G  Q      P+ V+S++   V+ VACG  HT A+ +  
Sbjct: 205 LVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIK-EPVRQVACGGGHTVALAE-- 261

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF----DFVQASCGRMLT 496
                     G ++T+G    G+LGH      +  + V RLV+        Q  CG   T
Sbjct: 262 ----------GNVYTFGLGQFGQLGH---GTFIFESRVPRLVEHFKKGRACQVVCGENHT 308

Query: 497 VGLTGLGKVYTMGSAVHGQLG 517
             +T  G +YT G   HG+LG
Sbjct: 309 AVITEDGLLYTFGDGRHGKLG 329



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 98/208 (47%), Gaps = 35/208 (16%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRL--------GHKVNMDVSCPKLVECLSGINVQS 318
           +S G  H+ALVT +G ++ +GE   G+L        GH+V      P+LV+ +    V+ 
Sbjct: 196 VSCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRV------PQLVKSIKE-PVRQ 248

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           V+CG   T AL + G +YT+G    G       + E R     +PR L +     R  +V
Sbjct: 249 VACGGGHTVALAE-GNVYTFGLGQFGQLGHGTFIFESR-----VPR-LVEHFKKGRACQV 301

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK--VKSVACGPWH 432
            CGE HTA+++  G L+T+GDG  G LG G     +Q K    LR LK  V+   CG  H
Sbjct: 302 VCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCH 361

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
                  MV   +  A G    T  D D
Sbjct: 362 -------MVVLARPRARGAGEITLEDND 382


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 31/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+ ++   P  +E L   KV+ VACG  H
Sbjct: 195 QISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV +   Q +CG
Sbjct: 255 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ + +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIM 363

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 364 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 403



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ V+CG   +  LT+ G ++T+G   HG  
Sbjct: 216 GKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 332

Query: 406 LQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  +  P +V S   LK++S      HT+    IM+
Sbjct: 333 TRDQLMPLPVKVSSSEELKLES------HTSEKELIMI 364



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGAEHMLILSSDGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   +  L+  G +Y+ G    GQLG  + ++KD   +++EG L  + V+ ++
Sbjct: 192 PLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEG-LDNQKVEFVA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 34/416 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G + Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D    Q +T      P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V++VACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 34/416 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G + Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D    Q +T      P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V++VACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 168/337 (49%), Gaps = 26/337 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G +H ALVT+ G++F +G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G +Y  G NN G   +G+   R+ +   + F+    +++  +A G   +A ++ 
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKM--LAAGSNTSAALTQ 158

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+L+ +GD + G +G G   N   P+EV    G +V  V+CG +H+A +          
Sbjct: 159 DGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT--------- 207

Query: 447 NAIGGKLFTWGDADKGRLGHVDGER---KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             + G L+T+G+ D G+LG +  E+     +P  VT + D   VQ +CG   TV LT   
Sbjct: 208 --VDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALT-EN 262

Query: 504 KVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           +VY+ G    GQLG+     + R   VVE   ++  VK  + G  H A++T  G +YT+G
Sbjct: 263 EVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 562 KNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
              +G+LGLG+     +  PT      D  V SV CG
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 127/252 (50%), Gaps = 35/252 (13%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++CG+ HTA+V+ +G+LF +G   +G LG G    V++P  V++L+  +VK  ACG  H
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTH 99

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR----LVDFDFVQ 488
           T     +   R       G L+  G  ++G+LG        L  C  R    LV+F F +
Sbjct: 100 TL----VFTSR-------GNLYACGGNNEGQLG--------LGDCNDRTSFHLVEF-FNK 139

Query: 489 ASCGRMLTVG------LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
               +ML  G      LT  G++Y  G    GQ+G  K  + ++T  E  + +  V  +S
Sbjct: 140 QGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESN-ALTPQEVSVGKR-VFWVS 197

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSIT 600
            G YH A +T  G++YT+G+  +G+LGL   +    + P  V  + DR V+ V CG   T
Sbjct: 198 CGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHT 256

Query: 601 AAICLHKSISVG 612
            A+  ++  S G
Sbjct: 257 VALTENEVYSFG 268



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNM--DVSCP 305
           LP+++E      V++ + G  H AL+T  G ++ +G+G+ G+LG    +  N      CP
Sbjct: 286 LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCP 345

Query: 306 KLVECLSGINVQSVSCGEFQTCALTK 331
           + ++     +V SV+CG      L K
Sbjct: 346 RFLD----YHVHSVTCGGCHMLVLAK 367


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 34/416 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G + Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D    Q +T      P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V++VACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 31/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+ ++   P  +E L   KV+ VACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV +   Q +CG
Sbjct: 255 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ + +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIM 363

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 364 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 403



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ V+CG   +  LT+ G ++T+G   HG  
Sbjct: 216 GKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 332

Query: 406 LQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  +  P +V S   LK++S      HT+    IM+
Sbjct: 333 TRDQLMPLPVKVSSSEELKLES------HTSEKELIMI 364



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGAEHMLILSSDGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G +Y+ G    GQLG  + ++KD   +++EG L  + V+ ++
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEG-LDNQKVEFVA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 31/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+ ++   P  +E L   KV+ VACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV +   Q +CG
Sbjct: 255 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ + +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIM 363

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 364 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 403



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ V+CG   +  LT+ G ++T+G   HG  
Sbjct: 216 GKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 332

Query: 406 LQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  +  P +V S   LK++S      HT+    IM+
Sbjct: 333 TRDQLMPLPVKVSSSEELKLES------HTSEKELIMI 364



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGAEHMLILSSDGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G +Y+ G    GQLG  + ++KD   +++EG L  + V+ ++
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEG-LDNQKVEFVA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 31/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+ ++   P  +E L   KV+ VACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV +   Q +CG
Sbjct: 255 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ + +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIM 363

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 364 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 403



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ V+CG   +  LT+ G ++T+G   HG  
Sbjct: 216 GKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 332

Query: 406 LQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  +  P +V S   LK++S      HT+    IM+
Sbjct: 333 TRDQLMPLPVKVSSSEELKLES------HTSEKELIMI 364



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGAEHMLILSSDGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G +Y+ G    GQLG  + ++KD   +++EG L  + V+ ++
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEG-LDNQKVEFVA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 185/401 (46%), Gaps = 33/401 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D    K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y+WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 341 NNHG-ADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           ++ G   L+G E   R   +PR +  +L  +++ +VACG +H+  +S + ++F +G   +
Sbjct: 111 DSDGQLGLLGSEEYIR---VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 399 GVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWG 215

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +             +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 577 ETPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQS 615
           ++P  V+   +    +  C   I +    C+ +  S GDQS
Sbjct: 336 KSPFTVKG--NWFSYNGQCPQDIDSEDCFCVKRIFSGGDQS 374


>gi|405964700|gb|EKC30153.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 774

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 167/365 (45%), Gaps = 46/365 (12%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINVQSVSCGEFQT 326
           +L AK  AL      VF WG G            VS P KL    S   V  VS G  Q 
Sbjct: 303 ALSAKPPAL----SSVFFWGIG------------VSSPVKLPLPSSDTQVTQVSTGRTQK 346

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSH---WLPRKLFDTLDGVRVSKVACGEWHTAI 383
            A+TK+G ++ W  +N G D +    + SH   ++PR L +   GV + +VACG+  TA 
Sbjct: 347 AAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYL-EGQSGVNIQQVACGDLFTAC 405

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++  G L T+G G +G LGHGN  +V+Q K VE L G +V  V+CG  H  A+ +     
Sbjct: 406 LTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVTN----- 460

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                   ++F+WG  D GRLG  D E    P  V            CG   ++ LT   
Sbjct: 461 ------EHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTLDN 514

Query: 504 KVYTMGSAVHGQLGNP---------KAKDRSITVVEGK---LKEEFVKGISSGSYHVAVL 551
           K+   GS  + +L            K  D   T V+     +    VKG++ G+ H A +
Sbjct: 515 KLLCCGSNRYNKLALDVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAV 574

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI-S 610
           T  G  YT+G N  GQLG   +  R+ P  V+  + ++V  V CG + T  +     + S
Sbjct: 575 TVEGQCYTFGTNQFGQLGNQTNNSRQ-PQEVKIAQTQKVAMVACGDTFTVIVADEGEVYS 633

Query: 611 VGDQS 615
            G+QS
Sbjct: 634 FGNQS 638



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 139/320 (43%), Gaps = 48/320 (15%)

Query: 221 VMIWGEGVLGGD--IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           + +W    +G D  I GA +   S   T V    P+ LE    +++Q ++ G    A +T
Sbjct: 355 LFVWESSNVGTDTLIPGATE---SHTLTYV----PRYLEGQSGVNIQQVACGDLFTACLT 407

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G +  +G G  G LGH    DV+  K+VE L G  V  VSCG     A+T   E+++W
Sbjct: 408 DRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVTNEHEVFSW 467

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  ++G   +G++ S S   P  + + L   R S V CG   + I++   +L   G   +
Sbjct: 468 GRGDNGRLGLGDQESHSSPRPVVIPEPL---RPSSVHCGVDCSMILTLDNKLLCCGSNRY 524

Query: 399 GVLG-----------------HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             L                  H  +Q  S P     +  L VK VA G  HTAA+     
Sbjct: 525 NKLALDVIATDGTCMKLVDEIHTFVQTASHP-----IGNLLVKGVAMGTSHTAAV----- 574

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  + G+ +T+G    G+LG+  +  R+  P  V           +CG   TV + 
Sbjct: 575 ------TVEGQCYTFGTNQFGQLGNQTNNSRQ--PQEVKIAQTQKVAMVACGDTFTVIVA 626

Query: 501 GLGKVYTMGSAVHGQLGNPK 520
             G+VY+ G+   G+LG P+
Sbjct: 627 DEGEVYSFGNQSRGRLGRPE 646



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 146/341 (42%), Gaps = 50/341 (14%)

Query: 264 VQNISLGAKHAALVTKEGEVFCW---GEGKDGRL--GHKVNMDVSCPKLVECLSGINVQS 318
           V  +S G    A VTK G +F W     G D  +    + +     P+ +E  SG+N+Q 
Sbjct: 336 VTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQSGVNIQQ 395

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           V+CG+  T  LT  G + T+G   +G    G     +     K+ + L G  V +V+CG 
Sbjct: 396 VACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQ---AKIVEDLLGYEVVQVSCGA 452

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            H   V+   ++F++G G  G LG G+ ++ S P+ V     L+  SV CG         
Sbjct: 453 SHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCG--------- 503

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVD--FDFVQAS-- 490
             VD      +  KL   G     +L       DG      TC+ +LVD    FVQ +  
Sbjct: 504 --VDCSMILTLDNKLLCCGSNRYNKLALDVIATDG------TCM-KLVDEIHTFVQTASH 554

Query: 491 -CGRML----------TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
             G +L          T  +T  G+ YT G+   GQLGN     R    V+    ++ V 
Sbjct: 555 PIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSRQPQEVKIAQTQK-VA 613

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            ++ G     ++   G VY++G  + G+LG    +  E PT
Sbjct: 614 MVACGDTFTVIVADEGEVYSFGNQSRGRLG----RPEEDPT 650


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 178/354 (50%), Gaps = 28/354 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  ++ G +H+A+VT+ G ++ +G    G+LG      ++ P  V+ L    V+ V+CG 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGR 99

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T   ++SG+++++G N  G   +G     +  LP+++ +++  + + ++ACG +H+ I
Sbjct: 100 NHTIVYSESGKLFSFGCNEDGQ--LGHVDKENELLPKEI-ESIPQMEIKQIACGTYHSII 156

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +S  G ++ +G+   G LG G     S PK+++  +  +V SV+CG +HTA     +V R
Sbjct: 157 LSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EVVSVSCGYYHTA-----LVTR 209

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGE--RKLLPTCVTRLVDFD-FVQASCGRMLTVGLT 500
                  G L+T+G+ + G+LG    +     +P  V    D D ++  SCG   TV +T
Sbjct: 210 ------DGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAIT 263

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVE----GKLKEEFVKGISSGSYHVAVLTSGGS 556
             G  Y  G    GQLG+     + + V E     KL  +    +S G  H AV+T  G 
Sbjct: 264 KQGHCYAWGDGSQGQLGHGT---KLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGK 320

Query: 557 VYTWGKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAICLHKS 608
           V+T+G   +G+LG G+     +  P ++       V  V CG   T  + +HK+
Sbjct: 321 VFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKN 374



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 16/255 (6%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           + LLPK +ES   ++++ I+ G  H+ +++++G+V+ WG   +G+LG    ++ S PK +
Sbjct: 129 NELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKL 188

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           +      V SVSCG + T  +T+ G +YT+G N  G   +   +  +  +P+ +    D 
Sbjct: 189 KFKK--EVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADN 246

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVA 427
                V+CG  HT  ++  G  + +GDG+ G LGHG  L  V++PK+++ L G K  SV+
Sbjct: 247 DEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVS 306

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFD 485
           CG  HTA + +            GK+FT+GD   G+LG  +        P  ++R   F+
Sbjct: 307 CGESHTAVVTE-----------SGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFN 355

Query: 486 FVQASCGRMLTVGLT 500
            V  SCG   T+ L 
Sbjct: 356 VVYVSCGGCHTLVLA 370



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 40/349 (11%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF-DTLDGVRVSKV 374
           V  ++CG+  +  +T+SG +Y +G N+ G   +G  +S    L +  F   L   +V KV
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKS----LNKPSFVKPLKPEKVRKV 95

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           ACG  HT + S SG+LF++G    G LGH + +N   PKE+ES+  +++K +ACG +H+ 
Sbjct: 96  ACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSI 155

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQASCG 492
            + +            G ++ WG+ ++G+LG  +     LP    + + F  + V  SCG
Sbjct: 156 ILSE-----------DGDVYVWGNNNEGQLGLGEEVENSLP----KKLKFKKEVVSVSCG 200

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL----KEEFVKGISSGSYHV 548
              T  +T  G +YT G    G+LG   ++  + TV +        +E++  +S G+ H 
Sbjct: 201 YYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYI-SVSCGARHT 259

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDS-QERETPTFVEALRDRQVESVVCGSSITAAICLH- 606
             +T  G  Y WG  + GQLG G    E   P  ++ L  ++  SV CG S TA +    
Sbjct: 260 VAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESG 319

Query: 607 KSISVGD---------QSSCSQCRMPFGFRRKKHNCYNCGLHFCSACST 646
           K  + GD         + S S    P    R   N +N     C  C T
Sbjct: 320 KVFTFGDGRHGKLGQGEDSFSNSFDPVYLSR--FNYFNVVYVSCGGCHT 366



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           +K + V  ++ G  H AV+T  G +Y +G N  GQLGLG ++    P+FV+ L+  +V  
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRK 94

Query: 593 VVCGSSIT 600
           V CG + T
Sbjct: 95  VACGRNHT 102



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC--PKLVECLSGINVQSVSCGEF 324
           +S G  H A+VT+ G+VF +G+G+ G+LG   +   +   P  +   +  NV  VSCG  
Sbjct: 305 VSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGC 364

Query: 325 QTCALT--KSGEIYTWGHNNHGADLVGER 351
            T  L   K+ + +  G N+  A +  ++
Sbjct: 365 HTLVLAVHKNKDDFVDGENSLRASMTSQK 393


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 185/401 (46%), Gaps = 33/401 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D    K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y+WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 341 NNHG-ADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           ++ G   L+G E   R   +PR +  +L  +++ +VACG +H+  +S + ++F +G   +
Sbjct: 111 DSDGQLGLLGSEEYIR---VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 399 GVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWG 215

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +             +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 577 ETPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQS 615
           ++P  V+   +    +  C   I +    C+ +  S GDQS
Sbjct: 336 KSPFTVKG--NWFSYNGQCPQDIDSEDCFCVKRIFSGGDQS 374


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 24/328 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAIC 604
             P  V  L    V  + CG   T+A  
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 34/416 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G + Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----------LSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D    Q +T      P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ L G  V++VACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFE-LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 17/324 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+ ++ G  H+  + ++GEV+  G    G+LGH+   + S P+L+  L+G ++  V+CG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--SEGSKPELIGALAGQHIVHVACG 92

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  + AL+  G++++WG  + G   +G           +L   L+   + +++CG WH  
Sbjct: 93  ESHSVALSDQGQVFSWGAGSDGQ--LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCL 150

Query: 383 IVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  GQ FT+G  ++G LG G    + + P+ V+SL G+ +  VA G  H+ A+     
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 205

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 ++ G +F WG    G+LG  D   +  P  V  L     V  SCG   T  LT 
Sbjct: 206 ------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK 259

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
            G V+T G+   GQLG+    D        +L    V  I+ G +H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 561 GKNANGQLGLGDSQERETPTFVEA 584
           G    GQLG G +   + P+ V+ 
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 147/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCP--KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+ V  P  ++   +   NV+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G     S     +L   L G  +  VACGE H+  +S  GQ+F++G G+ G 
Sbjct: 61  NTKGQ--LGHESEGSK---PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG   +++ V+ P+ ++ L    +  ++CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH-----------CLALAADGQFFTWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVSQIACGRHHTLAF 309



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 139/268 (51%), Gaps = 15/268 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECL 311
           P+L+ +     + +++ G  H+  ++ +G+VF WG G DG+LG     D V+ P+L++ L
Sbjct: 75  PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKL 134

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +   +  +SCG +   AL   G+ +TWG N++G   +G +   S   P+++  +LDG+ +
Sbjct: 135 NQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG-KECPSQASPQRV-KSLDGIPL 192

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           ++VA G  H+  +S SG +F +G  + G LG  + ++   P  V+ LR  KV  ++CG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HTA +              G +FT+G    G+LGH     ++ P  V  L+  +  Q +C
Sbjct: 253 HTAVLTK-----------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIAC 301

Query: 492 GRMLTVGLT-GLGKVYTMGSAVHGQLGN 518
           GR  T+      G +Y  G    GQLG 
Sbjct: 302 GRHHTLAFVPSSGMIYAFGCGTRGQLGT 329



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 142/289 (49%), Gaps = 26/289 (8%)

Query: 338 WGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           WG+++ G   +G        +P  +++  +    V +VACG  H+  +   G+++T G  
Sbjct: 4   WGYSSFGQPGIGSNLQVI--IPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
           T G LGH +    S+P+ + +L G  +  VACG  H+ A+ D            G++F+W
Sbjct: 62  TKGQLGHES--EGSKPELIGALAGQHIVHVACGESHSVALSD-----------QGQVFSW 108

Query: 457 GDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G    G+LG    E  + +P  + +L     +Q SCG    + L   G+ +T G   +GQ
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168

Query: 516 LGNPK-----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           LG  K     A  + +  ++G    +    +++G  H   L+  G+V+ WGKN++GQLGL
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQ----VAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            D ++RE+P  V+ LR ++V  + CG   TA +     +      SC Q
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     +    +P+L++      +  IS G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG N+ G   + + R
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL   L   +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKL---LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFV----------PSSGMIYAFGCGTRGQLG 328


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 169/344 (49%), Gaps = 31/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG G+ ++   P  +E+L   +V+ +ACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV     Q +CG
Sbjct: 255 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ I +       E +K  +  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIM 363

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 364 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVRRWIADV 403



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ ++CG   +  LT+ G ++T+G   HG  
Sbjct: 216 GKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 332

Query: 406 L--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
              Q +  P +V S   LK+++      HT+    IM+
Sbjct: 333 TRDQLIPLPVKVSSSEELKLET------HTSEKELIMI 364



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 31/250 (12%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGAEHMLILSSDGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
              Q S G   ++ L+  G +Y+ G    GQLG    + +    +   L  + V+ ++ G
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACG 251

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A  
Sbjct: 252 GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYV 311

Query: 605 --LHKSISVG 612
             L K  S G
Sbjct: 312 SDLGKVFSFG 321


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 185/401 (46%), Gaps = 33/401 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D    K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y+WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL 110

Query: 341 NNHG-ADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           ++ G   L+G E   R   +PR +  +L  +++ +VACG +H+  +S + ++F +G   +
Sbjct: 111 DSDGQLGLLGSEEYIR---VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 399 GVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG G + +  + P+ ++SL G+    VA G  H+  +            + G +F WG
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWG 215

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +             +L    V  ++ G  H  A + S G +Y++G   NGQLG G +  R
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 577 ETPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQS 615
           ++P  V+   +    +  C   I +    C+ +  S GDQS
Sbjct: 336 KSPFTVKG--NWFSYNGQCPQDIDSEDCFCVKRIFSGGDQS 374


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 175/398 (43%), Gaps = 27/398 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  L K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--------RVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+       P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              G   L G        +PR +  +L  +++ +VACG +H+  +S   ++F++G   +G
Sbjct: 111 ATDGQLGLPGTEECVR--VPRNI-RSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G   +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +PT +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
           +P  V+             +      C+ +  S GDQS
Sbjct: 337 SPFTVKGSWIPFSPQCPMSTDSEECYCVKRIFSGGDQS 374


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 27/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++ G   L+G        +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G
Sbjct: 111 DSDGQLGLLGSEECIR--VPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G + +  + P+ ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 336

Query: 578 TPTFVEA 584
           +P  V+ 
Sbjct: 337 SPFTVKG 343



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  +      V+ V CG   T  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGT 397
           N+ G   +G  +SR    P ++   LD   +  V+CGE HT  ++  GQ++ +G   DG 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G+LG  + + +  P+ ++SL  +++  VACG +H+ A+           +   ++F WG
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL-----------SKASEVFCWG 162

Query: 458 DADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  +D +++  P  +  L+   F+Q + G   +  LT  G ++  G    GQL
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G     DR +  +   L+ + +  I  G  H A LT  G V+T+G    GQLG   +   
Sbjct: 223 GLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T+A 
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 175/398 (43%), Gaps = 27/398 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  L K         ++++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--------RIRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+       P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              G   L G        +PR +  +L  +++ +VACG +H+  +S   ++F++G   +G
Sbjct: 111 ATDGQLGLPGTEECIR--VPRNI-KSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G   +  + P  ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +PT +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
           +P  V+          +  +      C+ +  S GDQS
Sbjct: 337 SPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 164/324 (50%), Gaps = 21/324 (6%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
           +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 20  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 79

Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           LS   V+ V+   G     ALT  G+++ WG  + G   +G   SR +    +L + L  
Sbjct: 80  LSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGK--LGH-FSRMNCDKPRLIEALKT 136

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 137 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 196

Query: 429 GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 197 GSRDAQTLALTDE-----------GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 245

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGS 545
            Q  CG   ++ LT  G V+T G   + +LG+      R   VVEG   ++ V  ++ G+
Sbjct: 246 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVGA 304

Query: 546 YHVAVLTSGGSVYTWGKNANGQLG 569
            H   +T  G VY WG N +GQ G
Sbjct: 305 LHCLAVTDSGQVYAWGDNDHGQQG 328



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 151/316 (47%), Gaps = 17/316 (5%)

Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
           WG     +LG      +  P   E LS +NV  V+ G     A+T  G++Y  G   +G 
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61

Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGH 403
             +G   S +  +PR++   L    V KVA   G  H   ++  G++F +G+G  G LGH
Sbjct: 62  LGLG-ISSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGH 119

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
            +  N  +P+ +E+L+  +++ +ACG  H+AA+              G+L+TWG  + GR
Sbjct: 120 FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLGEYGR 168

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           LGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    G+LG   +
Sbjct: 169 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 228

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
           +  +I     +L  + V  I  G+     LT  G V+TWGK    +LG G       P  
Sbjct: 229 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 288

Query: 582 VEALRDRQVESVVCGS 597
           VE LR +++  V  G+
Sbjct: 289 VEGLRGKKIVHVAVGA 304



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 23/274 (8%)

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            WG N+   D +G  +     +P    +TL  + V +VA G      V+  G+++  G+ 
Sbjct: 1   VWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 57

Query: 397 TFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGGKL 453
           T G LG G +   V  P+++ +L    VK VA   G  H  A+            + GK+
Sbjct: 58  TNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----------VDGKV 106

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F WG+ D G+LGH        P  +  L        +CG   +  LT  G++YT G   +
Sbjct: 107 FWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 166

Query: 514 GQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           G+LG+     + K + + V+ G    +   G  S       LT  G V++WG    G+LG
Sbjct: 167 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSWGDGDFGKLG 224

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G S+    P  +E L  + V  + CG+  + A+
Sbjct: 225 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 258



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 117/283 (41%), Gaps = 32/283 (11%)

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HV 467
           +  P   E+L  L V  VA G   + ++  + V+        GK++  G+A  GRLG  +
Sbjct: 18  IKVPSFSETLSALNVVQVAGG---SKSLFAVTVE--------GKVYACGEATNGRLGLGI 66

Query: 468 DGERKLLPTCVTRLVDFDFVQA---SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
                 +P  +T L  +   +    S GR  T  LT  GKV+  G    G+LG+    + 
Sbjct: 67  SSGTVPIPRQITALSSYVVKKVAVHSGGRHATA-LTVDGKVFWWGEGDDGKLGHFSRMNC 125

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
               +   LK + ++ I+ GS H A LTS G +YTWG    G+LG GD+  +  P  V+ 
Sbjct: 126 DKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 185

Query: 585 LRDRQVESVVCGSSITAAICLHKS---ISVGD-------QSSCSQCRMPFGFRRKKHNC- 633
           L   +V  V CGS     + L       S GD       +     C +P    R      
Sbjct: 186 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 245

Query: 634 --YNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHLQK 674
               CG  F  A +   ++    T  KG   R+      H++K
Sbjct: 246 CQIECGAQFSLALTKSGVV---WTWGKGDYFRLGHGSDVHVRK 285


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 175/398 (43%), Gaps = 27/398 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  L K         ++++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--------RIRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+       P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              G   L G        +PR +  +L  +++ +VACG +H+  +S   ++F++G   +G
Sbjct: 111 ATDGQLGLPGTEECIR--VPRNI-KSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G   +  + P  ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +PT +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
           +P  V+          +  +      C+ +  S GDQS
Sbjct: 337 SPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 175/398 (43%), Gaps = 27/398 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  L K         ++++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNK--------RIRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+       P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKAR--KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              G   L G        +PR +  +L  +++ +VACG +H+  +S   ++F++G   +G
Sbjct: 111 ATDGQLGLPGTEECIR--VPRNI-KSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167

Query: 400 VLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G   +  + P  ++SL G+    +A G  H+  +            + G +F WG 
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL-----------TLSGAIFGWGR 216

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   + +PT +  L     V   CG   T  LT  G V+T G+  +GQLG+
Sbjct: 217 NKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                        +L    V  I+ G  H  A + S G +Y++G   NGQLG G +  R+
Sbjct: 277 NSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 578 TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
           +P  V+          +  +      C+ +  S GDQS
Sbjct: 337 SPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 170/378 (44%), Gaps = 23/378 (6%)

Query: 228 VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWG 287
           V G +I G + G   Q KT    L P L+ +     V+ I  G     L+   G VF  G
Sbjct: 292 VWGSNIHGELPGL--QGKT---CLQPNLVST--FKQVREIVCGQNCTFLLQTNGSVFACG 344

Query: 288 EGKDGRLGHKVNMDVSCPKLVECLSG---INVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
           EG  GRLG   + D      +  L G   I + +   G+  T A+  SGE+++WG  ++G
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYG 404

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
              +G   S     P+++   L    V + +CG  H+A+++  G++FT+G G +G+LG G
Sbjct: 405 K--LGHGNSERQRKPKQII-ALQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDG 461

Query: 405 NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
                  P+ + SL+   +  +ACG  HT A+ +           G KL+ WGD + G+L
Sbjct: 462 GNSPQKTPQLILSLKNEHISQIACGKDHTLALANN----------GKKLYAWGDGEFGKL 511

Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
           G      + +P  V    +    + +CG   ++ L   G +YT G      +      D 
Sbjct: 512 GLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDN 571

Query: 525 SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
           +I  +   L    +  I+ G  ++  L + G+++ WG N  GQLG+G +     P  V  
Sbjct: 572 TIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCT 631

Query: 585 LRDRQVESVVCGSSITAA 602
                +  +  G++  AA
Sbjct: 632 FSGTNITRLSAGTTHCAA 649



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 134/273 (49%), Gaps = 20/273 (7%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +Y WG N HG +L G +      L   L  T   VR  ++ CG+  T ++ T+G +F  G
Sbjct: 290 VYVWGSNIHG-ELPGLQGKTC--LQPNLVSTFKQVR--EIVCGQNCTFLLQTNGSVFACG 344

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC---GPWHTAAIVDIMVDRCKSNAIGG 451
           +GT+G LG G   +      +  L+G  +  +A    G  HT A+ D            G
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVAD-----------SG 393

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++F+WGD D G+LGH + ER+  P  +  L     VQASCG   +  LT  GKV+T G  
Sbjct: 394 EVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQG 453

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGL 570
            +G LG+     +    +   LK E +  I+ G  H +A+  +G  +Y WG    G+LGL
Sbjct: 454 QYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G +  R  P  V++ R+  ++ + CGS  +  +
Sbjct: 514 GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVL 546



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 14/322 (4%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG    G L          P LV       V+ + CG+  T  L  +G ++  G   
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFK--QVREIVCGQNCTFLLQTNGSVFACGEGT 347

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G    G        +P         ++++    G+ HT  V+ SG++F++GDG +G LG
Sbjct: 348 YGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLG 407

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           HGN +   +PK++ +L+   V   +CG  H+A +              GK+FT+G    G
Sbjct: 408 HGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTK-----------DGKVFTFGQGQYG 456

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQLGNPKA 521
            LG      +  P  +  L +    Q +CG+  T+ L   GK +Y  G    G+LG    
Sbjct: 457 ILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGST 516

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
             RSI  +    +   +K I+ GS    VL + G +YT+G      +   D  +   P  
Sbjct: 517 SVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQI 576

Query: 582 VEALRDRQVESVVCGSSITAAI 603
           V +L    +  +  G +   A+
Sbjct: 577 VSSLMPHPIIDIAVGCNYILAL 598



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 25/236 (10%)

Query: 378 EWHTAI-----VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +W T       +S    ++ +G    G L     +   QP  V + +  +V+ + CG   
Sbjct: 273 DWFTNFPKDWEISAPITVYVWGSNIHGELPGLQGKTCLQPNLVSTFK--QVREIVCGQNC 330

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFDFVQAS 490
           T  +              G +F  G+   GRLG    D E  L+P  +T L  +  +Q +
Sbjct: 331 TFLL-----------QTNGSVFACGEGTYGRLGQGTSDDEHSLVP--ITELQGYCIIQLA 377

Query: 491 C---GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
               G   T+ +   G+V++ G   +G+LG+  ++ +        L+ E V   S G  H
Sbjct: 378 TSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKH 437

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            AVLT  G V+T+G+   G LG G +  ++TP  + +L++  +  + CG   T A+
Sbjct: 438 SAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLAL 493



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/85 (24%), Positives = 42/85 (49%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
           +D  +P+++ S +   + +I++G  +   +   G ++ WG  ++G+LG         P+L
Sbjct: 569 LDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQL 628

Query: 308 VECLSGINVQSVSCGEFQTCALTKS 332
           V   SG N+  +S G     A + S
Sbjct: 629 VCTFSGTNITRLSAGTTHCAAWSNS 653


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G +H ALVT+ G++F +G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G +Y  G NN G   +G+   R+ +   + F+    +++  +A G   +A ++ 
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKM--LAAGSNTSAALTQ 158

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+L+  GD + G +G G   N   P+EV    G +V  V+CG +H+A +          
Sbjct: 159 DGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT--------- 207

Query: 447 NAIGGKLFTWGDADKGRLGHVDGER---KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             + G L+T+G+ D G+LG +  E+     +P  VT + D   VQ +CG   TV LT   
Sbjct: 208 --VDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALTE-N 262

Query: 504 KVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           +VY+ G    GQLG+     + R   VVE   ++  VK  + G  H A++T  G +YT+G
Sbjct: 263 EVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 562 KNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
              +G+LGLG+     +  PT      D  V SV CG
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 35/252 (13%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++CG+ HTA+V+ +G+LF +G   +G LG G    V++P  V++LR  +VK  ACG  H
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTH 99

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR----LVDFDFVQ 488
           T     +   R       G L+  G  ++G+LG        L  C  R    LV+F F +
Sbjct: 100 TL----VFTSR-------GNLYACGGNNEGQLG--------LGDCNDRTSFHLVEF-FNK 139

Query: 489 ASCGRMLTVG------LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
               +ML  G      LT  G++Y  G    GQ+G  K  + ++T  E  + +  V  +S
Sbjct: 140 QGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESN-ALTPQEVSVGKR-VFWVS 197

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSIT 600
            G YH A +T  G++YT+G+  +G+LGL   +    + P  V  + DR V+ V CG   T
Sbjct: 198 CGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHT 256

Query: 601 AAICLHKSISVG 612
            A+  ++  S G
Sbjct: 257 VALTENEVYSFG 268



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 116/283 (40%), Gaps = 68/283 (24%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL----------SG 313
           V+  + G  H  + T  G ++  G   +G+LG     D +   LVE            +G
Sbjct: 90  VKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAG 149

Query: 314 INVQS-----------------------------------------VSCGEFQTCALTKS 332
            N  +                                         VSCG + +  +T  
Sbjct: 150 SNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVD 209

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           G +YT+G  + G   +   +  +H +P+++ D  D  RV +VACG  HT +  T  ++++
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD--RVVQVACGGGHT-VALTENEVYS 266

Query: 393 YGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           +G G FG LGHG     S+ P+ VE  R  +VK  ACG  HTA I D            G
Sbjct: 267 FGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITD-----------NG 315

Query: 452 KLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
            L+T+GD   G+  LG  +   +  PT   R +D+     +CG
Sbjct: 316 LLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNM--DVSCP 305
           LP+++E      V++ + G  H AL+T  G ++ +G+G+ G+LG    +  N      CP
Sbjct: 286 LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCP 345

Query: 306 KLVECLSGINVQSVSCGEFQTCALTK 331
           + ++     +V SV+CG      L K
Sbjct: 346 RFLD----YHVHSVTCGGCHMLVLAK 367


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 151/290 (52%), Gaps = 8/290 (2%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           VF +G+   G LG     + S P  V     +NV  ++ G      LT++G++ T G N 
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFN- 99

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKV--ACGEWHTAIVSTSGQLFTYGDGTFGV 400
            G+  +G   ++S   P+K+ ++L  +R++ +  A G  + AI+S  G+L+T G   +G 
Sbjct: 100 -GSGQLGHGNNKSISTPKKI-ESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQ 157

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LGHG   N+S P  V++L+  +V +V+C  +H+  +   M  R  SN     +++ G  D
Sbjct: 158 LGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDM--RQASNQ-QTTVYSVGRND 214

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG      ++ P  +  L     +Q +CG   +V +T  G+V++ G   +GQLG+  
Sbjct: 215 NGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHND 274

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            K R+  V+   LK +F+   + G YH  V    G +Y +G+N  GQLG+
Sbjct: 275 TKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGI 324



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 184/382 (48%), Gaps = 48/382 (12%)

Query: 253 PKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           PK +ES   + + +IS   G ++ A+++++G+++  G    G+LGH    ++S P LV+ 
Sbjct: 115 PKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQA 174

Query: 311 LSGINVQSVSCGEFQTCALTKS--------GEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           L    V +VSC  + +  +T+           +Y+ G N++G   +G+  +  H +  K+
Sbjct: 175 LKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ--LGQEHT-CHEITPKI 231

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
             +L+  +V + ACG  H+  V+  G++F+ G    G LGH + ++ +QP  +ESL+   
Sbjct: 232 IRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKF 291

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRL 481
           +   ACG +HT    D            G+++ +G  DKG+LG   +G+  + P  +   
Sbjct: 292 IVQAACGYYHTLVRRDT-----------GEIYAFGRNDKGQLGIETNGQALIQPKQIQEF 340

Query: 482 VDFDFVQASCGRM--------------LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
           +    +Q S G                 ++G +G       G A    L N + + + ++
Sbjct: 341 LTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESG---AIMQGLAESNNLNNQQPQVQYLS 397

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
                 K+  +  I+ G YH   L   G ++T+G+  +GQLG G++++++ P  V +L D
Sbjct: 398 ------KKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHD 451

Query: 588 RQVESVVCGSSITAAICLHKSI 609
           ++V  +  G   T  +   K +
Sbjct: 452 KKVIGIAGGFYHTIVLVKQKKV 473



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 24/266 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           ++V  I+ G +H A++T+ G+V   G    G+LGH  N  +S PK +E L  I +  +S 
Sbjct: 72  MNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNNKSISTPKKIESLKNIRITHISS 131

Query: 322 --GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
             G      +++ G++YT G+NN+G    G   ++S+     L   L   +V+ V+C  +
Sbjct: 132 ANGCENLAIISQDGKLYTCGYNNYGQLGHG---TQSNLSTPTLVQALKDTQVTNVSCSYY 188

Query: 380 HTAIVS-----TSGQ---LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           H+ IV+      S Q   +++ G    G LG  +  +   PK + SL   +V   ACG  
Sbjct: 189 HSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLH 248

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           H+  +            + G++F+ G  D G+LGH D + +  P  +  L +   VQA+C
Sbjct: 249 HSVFV-----------TVHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAAC 297

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG 517
           G   T+     G++Y  G    GQLG
Sbjct: 298 GYYHTLVRRDTGEIYAFGRNDKGQLG 323



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 18/316 (5%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE--------GEVFCWGEGKDGRLGHK 297
           TQ +   P L+++     V N+S    H+ +VT++          V+  G   +G+LG +
Sbjct: 162 TQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQE 221

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
                  PK++  L+   V   +CG   +  +T  GE+++ G N++G   +G   ++S  
Sbjct: 222 HTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQ--LGHNDTKSRN 279

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVSQPKEVE 416
            P  L ++L    + + ACG +HT +   +G+++ +G    G LG   N Q + QPK+++
Sbjct: 280 QP-VLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQIQ 338

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
               L V ++     H+    + +    + N    +      A    L   +      P 
Sbjct: 339 EF--LTVSNI----QHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQ 392

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
                   +  + +CG   ++ L   G+++T G   HGQLG    +D+ +      L ++
Sbjct: 393 VQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDK 452

Query: 537 FVKGISSGSYHVAVLT 552
            V GI+ G YH  VL 
Sbjct: 453 KVIGIAGGFYHTIVLV 468



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 127/280 (45%), Gaps = 23/280 (8%)

Query: 233 IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
           +G   +G + Q  T    + PK++ S     V   + G  H+  VT  GEVF  G   +G
Sbjct: 210 VGRNDNGQLGQEHT-CHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNG 268

Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           +LGH      + P L+E L    +   +CG + T     +GEIY +G N+ G  L  E  
Sbjct: 269 QLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKG-QLGIETN 327

Query: 353 SRSHWLPRKL--FDTLDGVRVS-----KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
            ++   P+++  F T+  ++ S     ++  G+ H    S S  L   G    G+    N
Sbjct: 328 GQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQS--LGESGAIMQGLAESNN 385

Query: 406 LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           L N  QP+     + + +  +ACG +H+ A+       C+S    G+LFT+G  + G+LG
Sbjct: 386 LNN-QQPQVQYLSKKVNISKIACGCYHSIAL-------CES----GQLFTFGRGNHGQLG 433

Query: 466 HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
             + E + LP  V  L D   +  + G   T+ L    KV
Sbjct: 434 QGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 2/145 (1%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +F +G    G LG  D + + +P+ V    + +  Q + G      LT  G V T+G   
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNG 100

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISS--GSYHVAVLTSGGSVYTWGKNANGQLGL 570
            GQLG+   K  S       LK   +  ISS  G  ++A+++  G +YT G N  GQLG 
Sbjct: 101 SGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGH 160

Query: 571 GDSQERETPTFVEALRDRQVESVVC 595
           G      TPT V+AL+D QV +V C
Sbjct: 161 GTQSNLSTPTLVQALKDTQVTNVSC 185



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 53/94 (56%)

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           TG   V+  G   +G+LG    ++RSI        E  V  I++G+ H+AVLT  G V T
Sbjct: 36  TGAPLVFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLT 95

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            G N +GQLG G+++   TP  +E+L++ ++  +
Sbjct: 96  VGFNGSGQLGHGNNKSISTPKKIESLKNIRITHI 129


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G +H ALVT+ G++F +G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G +Y  G NN G   +G+   R+ +   + F+    +++  +A G   +A ++ 
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKM--LAAGSNTSAALTQ 158

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+L+  GD + G +G G   N   P+EV    G +V  V+CG +H+A +          
Sbjct: 159 DGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT--------- 207

Query: 447 NAIGGKLFTWGDADKGRLGHVDGER---KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
             + G L+T+G+ D G+LG +  E+     +P  VT + D   VQ +CG   TV LT   
Sbjct: 208 --VDGALYTFGEKDSGKLG-LSTEKLANHKVPQQVTDIPDR-VVQVACGGGHTVALT-EN 262

Query: 504 KVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           +VY+ G    GQLG+     + R   VVE   ++  VK  + G  H A++T  G +YT+G
Sbjct: 263 EVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 562 KNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
              +G+LGLG+     +  PT      D  V SV CG
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 35/252 (13%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++CG+ HTA+V+ +G+LF +G   +G LG G    V++P  V++LR  +VK  ACG  H
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTH 99

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR----LVDFDFVQ 488
           T     +   R       G L+  G  ++G+LG        L  C  R    LV+F F +
Sbjct: 100 TL----VFTSR-------GNLYACGGNNEGQLG--------LGDCNDRTSFHLVEF-FNK 139

Query: 489 ASCGRMLTVG------LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
               +ML  G      LT  G++Y  G    GQ+G  K  + ++T  E  + +  V  +S
Sbjct: 140 QGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESN-ALTPQEVSVGKR-VFWVS 197

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSIT 600
            G YH A +T  G++YT+G+  +G+LGL   +    + P  V  + DR V+ V CG   T
Sbjct: 198 CGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHT 256

Query: 601 AAICLHKSISVG 612
            A+  ++  S G
Sbjct: 257 VALTENEVYSFG 268



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNM--DVSCP 305
           LP+++E      V++ + G  H AL+T  G ++ +G+G+ G+LG    +  N      CP
Sbjct: 286 LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCP 345

Query: 306 KLVECLSGINVQSVSCGEFQTCALTK 331
           + ++     +V SV+CG      L K
Sbjct: 346 RFLD----YHVHSVTCGGCHMLVLAK 367


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 168/341 (49%), Gaps = 24/341 (7%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC- 321
           +V +++ G +H  L+   GEV+  G   +G+ G      V     V    G     V   
Sbjct: 265 EVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAY 324

Query: 322 -GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G   T  +   G++ ++G+N  G   +G+  + S  +P+ +   L+G+RV++ +C  +H
Sbjct: 325 NGCEHTLVVLDDGQMMSFGYNYRGQ--LGQGNTSSEPVPKPV-RGLNGIRVTQASCSYYH 381

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT-AAIVDI 439
           + I   +G+++T+G   FG LG G++ +   P  VESLRG ++ ++ACG +HT  + ++I
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEI 441

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
            V  C  N            D G+LG    + +RK +     +L         CG   T+
Sbjct: 442 GVQSCGKN------------DYGQLGLESTESQRKFV-AVKGKLDGAQVRHVRCGYYHTI 488

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSI--TVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
            LT    V+  G   +GQLG      R    T++EG  +E+ V  IS+G YH  ++ + G
Sbjct: 489 VLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGA-QEKHVYRISAGCYHTVLIDADG 547

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            ++ +G+N +GQLG GD+ ER +P  V     +++  V  G
Sbjct: 548 MLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAG 588



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 157/362 (43%), Gaps = 32/362 (8%)

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E EV+  G+   G LGH          LV+   G  V  V+ G   T  L  +GE+YT G
Sbjct: 230 EREVWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAG 289

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGT 397
           +N++G    G  + R   L R   D   G +  +V    G  HT +V   GQ+ ++G   
Sbjct: 290 YNDNGQCGQGTTQ-RVGVLTRVPID--GGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNY 346

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LG GN  +   PK V  L G++V   +C  +H+    D            G+++T+G
Sbjct: 347 RGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACD-----------NGEVYTFG 395

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
             D G+LG  D   + LP  V  L        +CG+  TV  T    V + G   +GQLG
Sbjct: 396 RNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLG 455

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
                  R    V+GKL    V+ +  G YH  VLT+   V+ +G+N  GQLGLG + +R
Sbjct: 456 LESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQR 515

Query: 577 E-TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
              PT +E  +++ V  +  G       C H  +   D        M F F R  H    
Sbjct: 516 VFGPTIIEGAQEKHVYRISAG-------CYHTVLIDADG-------MLFVFGRNHHGQLG 561

Query: 636 CG 637
            G
Sbjct: 562 TG 563



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 15/264 (5%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G + Q  T  + + PK +     + V   S    H+ +    GEV+ +G    G+LG   
Sbjct: 348 GQLGQGNTSSEPV-PKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGD 406

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
            +D   P LVE L G  + +++CG++ T   T    + + G N++G   +    S+  ++
Sbjct: 407 VIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFV 466

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVES 417
             K    LDG +V  V CG +HT +++    +F +G   +G LG G+  Q V  P  +E 
Sbjct: 467 AVK--GKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEG 524

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
            +   V  ++ G +HT     +++D        G LF +G    G+LG  D   +  P  
Sbjct: 525 AQEKHVYRISAGCYHT-----VLID------ADGMLFVFGRNHHGQLGTGDTNERHSPFP 573

Query: 478 VTRLVDFDFVQASCGRMLTVGLTG 501
           V+  +     + + G   T+ LTG
Sbjct: 574 VSTFLGKRIAKVAAGFYHTIVLTG 597



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 103/254 (40%), Gaps = 45/254 (17%)

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           AC  +H   V T GQ       ++G LGH +         V+   G +V  VA G  HT 
Sbjct: 224 ACSSFHEREVWTCGQ------NSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTV 277

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-------------VDGERKLLPTCVTRL 481
            +       C +    G+++T G  D G+ G              +DG RK +       
Sbjct: 278 LL-------CST----GEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQ------ 320

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
                V A  G   T+ +   G++ + G    GQLG        +      L    V   
Sbjct: 321 -----VHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQA 375

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           S   YH  +    G VYT+G+N  GQLG GD  +R+ P  VE+LR +++ ++ CG   T 
Sbjct: 376 SCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTV 435

Query: 602 AICLHKSISVGDQS 615
                 ++ +G QS
Sbjct: 436 V----STLEIGVQS 445


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 185/395 (46%), Gaps = 35/395 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G LG    G V  S  +N  +   L PKLLE+     + ++  GA H+A + ++
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYE--ELTPKLLEAFEGKAITHVEFGASHSAAIDED 101

Query: 281 GEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G+++ WG  +  +LG   + ++ + P+ VE L G+ +  VSCG++ T A+   G++Y+WG
Sbjct: 102 GKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWG 161

Query: 340 HNN---HGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWHTAIVSTSGQLFTYGD 395
                  GA  +G    +    PR L   +D GV +  V CGE+HT  +S  G+++ +G+
Sbjct: 162 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGN 221

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G +G LG+G       P+ +E      V S+A G   + A+ D            G+L++
Sbjct: 222 GEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTD-----------NGELYS 270

Query: 456 WGDADKGRLGHVDG------ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           WG   + +LG   G        + +P  V         Q + G      +T  G++Y  G
Sbjct: 271 WGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           S +         +   +T V     E  +  ++ G  +   L+  G V+T+GK ++  LG
Sbjct: 331 SKIW-------IEPHEMTAV----NEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLG 379

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            GD + +  P  +EAL D  + S+ CG     AI 
Sbjct: 380 HGDRKNQLQPVQIEALADVNITSISCGDYHMGAIA 414



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 30/295 (10%)

Query: 328 ALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           A +    +YTWG+       HG  +    R+    L  KL +  +G  ++ V  G  H+A
Sbjct: 37  AFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSA 96

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            +   G+L+ +G   +  LG G    + + P+EVE+L+G+K+  V+CG + TAA+     
Sbjct: 97  AIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAV----- 151

Query: 442 DRCKSNAIGGKLFTWG---DADKGRLGHVDGERKLLPT--CVTRLVD--FDFVQASCGRM 494
                    GK+++WG      KG  G      K  PT   +T LVD     +   CG  
Sbjct: 152 ------DADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEF 205

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            TV L+  G+++  G+  +G+LGN ++    +        ++ V  I++G      LT  
Sbjct: 206 HTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDN 265

Query: 555 GSVYTWGKNANGQLGLGDSQERET------PTFVEALRDRQVESVVCGSSITAAI 603
           G +Y+WG N+  QLG+G     +       P  VEA     V+ +  G    AA+
Sbjct: 266 GELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAV 320


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 187/416 (44%), Gaps = 34/416 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +         L P+  +  V   V+++  G +H   V  +
Sbjct: 1   MLCWGNASYGQLGLGGIDEEI--------VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +V+CGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           ++ G  L  +       +PR +  +L  +++ +VACG +H+  +S + ++F +G   +G 
Sbjct: 111 DSDG-QLGLQGSEECIRVPRNI-KSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQ 168

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G + Q  + P+ ++SL G+    VA G  H+  +            + G +F WG  
Sbjct: 169 LGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG  D   + +P  +  L     V   CG   T  LT  G V+T G+  +GQLG+ 
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                       +L    V   + G  H  A + S G +Y++G   NGQLG G +  R++
Sbjct: 278 STSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKS 337

Query: 579 PTFVEALRDRQVESVVCGSSITA--AICLHKSISVGDQ-----SSCSQCRMPFGFR 627
           P  V+   +    +  C   I +    C+ +  S GDQ     SS   C  P  FR
Sbjct: 338 PFTVKG--NWFSYNGQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFR 391



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+   G  +G  +D    Q +T      P+L++S + +    ++ G  H+ ++T 
Sbjct: 157 EVFCWGQNKYG-QLGLGID---CQKQTS-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G +F WG  K G+LG     D   P L++ L    +  + CGE  T ALTK G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTF 398
              +G   +G   +     PRK+F+ + G  V++ ACG  HT A V +SG+++++G G  
Sbjct: 268 AGGYGQ--LGHNSTSHEINPRKVFELM-GSIVTQAACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 399 GVLGHGNLQNVSQPKEVE 416
           G LG G+  N   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 162/343 (47%), Gaps = 35/343 (10%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +VT+  EV+ WG     +L       +  PKL    +  N Q++  G++ T  +   G +
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTV 429

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYG 394
              G  ++G   +G+  +++  L +  FD    +R +S     + HT  ++  G++F++G
Sbjct: 430 RACGKGSYGRLGLGDSNNQTT-LKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVFSWG 488

Query: 395 DGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           DG +G LGHGN      PK+++ +L+G  VKS++ G  H+AA+ +            G+L
Sbjct: 489 DGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE-----------DGEL 537

Query: 454 FTWGDADKGRLGHVDGERKL---------LPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           FTWG+ D GRLGH D  RKL          P  +  LV     +  CG   ++ LT  G+
Sbjct: 538 FTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQ 597

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----VKGISSGSYHVAVLTSGGSVYTW 560
           ++  G       G+P++     T +  KL EE     +  ++ G  H   LT    VY W
Sbjct: 598 LFAWGCGACLGCGSPES-----TALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAW 652

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
           G NA GQ G G SQ   T P  V  L    V  +  G+S + A
Sbjct: 653 GNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLA 695



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 25/235 (10%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDV-QNISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PK ++ A+   V ++IS G +H+A VT
Sbjct: 483 EVFSWGDG----DYGKLGHGNSSTQK------YPKQIQGALQGKVVKSISAGYRHSAAVT 532

Query: 279 KEGEVFCWGEGKDGRLGH-----KVNMD----VSCPKLVECLSGINVQSVSCGEFQTCAL 329
           ++GE+F WGEG  GRLGH     K+       V  PK++E L G+ ++ V CG   + AL
Sbjct: 533 EDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLAL 592

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           T +G+++ WG    GA L G     S  L  KL + L   R+  VACG+ H   ++   +
Sbjct: 593 TSTGQLFAWG---CGACL-GCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNE 648

Query: 390 LFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ +G+   G  G G+ Q+ +++PK+V  L G+ V  ++ G  H+ A   +  DR
Sbjct: 649 VYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTALPTDR 703



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 37/325 (11%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           +Q   L PKL  S    + Q I  G     +V  +G V   G+G  GRLG   + + +  
Sbjct: 394 SQEKILQPKL--SPAFANAQTIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTL 451

Query: 306 KLVECLSGINVQSVSC---GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +       ++ +S     +  T ALT  GE+++WG  ++G   +G   S +   P+++
Sbjct: 452 KKLNFDHRYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGK--LGHGNSSTQKYPKQI 509

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG---------VLGHGNLQNVSQPK 413
              L G  V  ++ G  H+A V+  G+LFT+G+G +G          LGHG+   V +PK
Sbjct: 510 QGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPK 569

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            +E+L GL ++ V CG   + A+              G+LF WG       G  +    L
Sbjct: 570 VIEALVGLYIRKVCCGSQSSLALTST-----------GQLFAWGCGACLGCGSPE-STAL 617

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-----NPKAKDRSITV 528
            P  V  L +   V  +CG    + LT   +VY  G+   GQ G     +P  K + +  
Sbjct: 618 RPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVG 677

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTS 553
           ++G      V  IS+G+ H    T+
Sbjct: 678 LDGVT----VHQISAGTSHSLAWTA 698



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 24/240 (10%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTK 331
           H   +T +GEVF WG+G  G+LGH  +     PK ++  L G  V+S+S G   + A+T+
Sbjct: 474 HTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE 533

Query: 332 SGEIYTWGHNNHGADLVGE-RRSRSH------WLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            GE++TWG  ++G    G+  R   H      + P K+ + L G+ + KV CG   +  +
Sbjct: 534 DGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKP-KVIEALVGLYIRKVCCGSQSSLAL 592

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +++GQLF +G G    LG G+ ++ + +PK VE L   ++  VACG  H  A+       
Sbjct: 593 TSTGQLFAWGCG--ACLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTH----- 645

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   +++ WG+   G+ G    +  +  P  V  L      Q S G   ++  T L
Sbjct: 646 ------DNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTAL 699



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 27/322 (8%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
           C S + +   S GE     +T++ E+Y WG N+      G   S+   L  KL       
Sbjct: 355 CPSPVPIDDSSTGE-NGNMVTENSEVYVWGSNSSHQLAEG---SQEKILQPKLSPAFANA 410

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +   +  G++ T +V + G +   G G++G LG G+  N +  K++       ++ ++  
Sbjct: 411 QT--IEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSS 468

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                  + +  D        G++F+WGD D G+LGH +   +  P  +   +    V++
Sbjct: 469 KGSDGHTLALTAD--------GEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKS 520

Query: 490 -SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-----SITVVEGKLKEE----FVK 539
            S G   +  +T  G+++T G   +G+LG+  +  +     +  V + K+ E     +++
Sbjct: 521 ISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIR 580

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSS 598
            +  GS     LTS G ++ WG  A   LG G  +     P  VE L + ++  V CG S
Sbjct: 581 KVCCGSQSSLALTSTGQLFAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDS 638

Query: 599 ITAAICLHKSISVGDQSSCSQC 620
              A+     +     ++  QC
Sbjct: 639 HCLALTHDNEVYAWGNNAMGQC 660



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 40/261 (15%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV-DIMV 441
           +V+ + +++ +G  +   L  G+ + + QPK   +      +++  G + T  +  D  V
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTV 429

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML------ 495
             C            G    GRLG  D   +      T L   +F      R +      
Sbjct: 430 RAC------------GKGSYGRLGLGDSNNQ------TTLKKLNFDHRYVIRKISSSKGS 471

Query: 496 ---TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVL 551
              T+ LT  G+V++ G   +G+LG+  +  +     ++G L+ + VK IS+G  H A +
Sbjct: 472 DGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAV 531

Query: 552 TSGGSVYTWGKNANGQLGLGDSQER---------ETPTFVEALRDRQVESVVCGSSITAA 602
           T  G ++TWG+   G+LG GDS  +           P  +EAL    +  V CGS  + A
Sbjct: 532 TEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLA 591

Query: 603 ICLHKSISVGDQSSCSQCRMP 623
           +     +      +C  C  P
Sbjct: 592 LTSTGQLFAWGCGACLGCGSP 612


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 20/346 (5%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           N + +++ +P L+ +   +    +S GA H+  V  +G  + WG   DGRLG+  +   S
Sbjct: 83  NNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSS 142

Query: 304 CPKLVEC---LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
            P LV      SG+ +  V  G F + A+  +G+IY+WG+N  G   +G+  + +  +P 
Sbjct: 143 VPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQ--LGDGTTLASSVPL 200

Query: 361 KLFDTL--DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           K+       GV  S+V+ G+ H+  + ++G+ + +G+   G LG G++     P  V + 
Sbjct: 201 KVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAP 260

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            G+    V+ G  H+ A+         S+   GK + WG+ D G+LG+      L P  V
Sbjct: 261 AGVSFTQVSAGDLHSLAV--------GSD---GKAYAWGNNDSGQLGNATTTSSLAPVLV 309

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEF 537
           + +      Q S G   ++ +   G  Y  G  V+GQLGN      ++ V V       F
Sbjct: 310 SPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTF 369

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
            + I +G  H     S  + YTWG N+ GQLG G S     P  + 
Sbjct: 370 TR-IEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAIS 414



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 146/346 (42%), Gaps = 21/346 (6%)

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
           +   T V  +LP ++          +S G  H+  +  +G ++ WG    G+LG+   ++
Sbjct: 36  TAGGTTVSGVLPGVV-------FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILN 88

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            S P LV    G+    VS G   + A+   G  Y WG N  G    G     S  L   
Sbjct: 89  SSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVS 148

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES---L 418
                 GV +S+V  G +H+  V ++G ++++G    G LG G     S P +V +    
Sbjct: 149 AGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP 208

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            G+    V+ G  H+ AI         SN   GK + WG+A  G+LG     R   P  V
Sbjct: 209 AGVTFSQVSAGDRHSLAI--------GSN---GKTYAWGEARGGQLGIGSISRTPAPALV 257

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
           +      F Q S G + ++ +   GK Y  G+   GQLGN         V+   +    V
Sbjct: 258 SAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAV 317

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             +S+G+ H   + + G+ Y WG N NGQLG         P  V A
Sbjct: 318 TQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTA 363



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 130/309 (42%), Gaps = 38/309 (12%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            L G+    VS G   + A+   G IY WG+N+ G   +G     +  +P  L  T DGV
Sbjct: 45  VLPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQ--LGNNSILNSSVP-VLVSTPDGV 101

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES---LRGLKVKSV 426
             ++V+ G  H+  V + G  + +G  T G LG+G     S P  V +     G+ +  V
Sbjct: 102 TFTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQV 161

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG-----------ERKLLP 475
             G +H+ A+         SN   G +++WG    G+LG  DG               +P
Sbjct: 162 MAGGFHSLAV--------GSN---GDIYSWGYNRSGQLG--DGTTLASSVPLKVSAGAVP 208

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLK 534
             VT      F Q S G   ++ +   GK Y  G A  GQLG    ++  +  +V     
Sbjct: 209 AGVT------FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAG 262

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
             F + +S+G  H   + S G  Y WG N +GQLG   +     P  V  +    V  V 
Sbjct: 263 VSFTQ-VSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVS 321

Query: 595 CGSSITAAI 603
            G+  + AI
Sbjct: 322 AGADHSLAI 330



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H+  +   G+ + WGE + G+LG         P LV   +G++   VS G+  +
Sbjct: 216 VSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHS 275

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            A+   G+ Y WG+N+ G   +G   + S   P  L   + G+ V++V+ G  H+  +  
Sbjct: 276 LAVGSDGKAYAWGNNDSGQ--LGNATTTSSLAP-VLVSPMGGLAVTQVSAGADHSLAIGA 332

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G  + +G    G LG+  +   + P  V +  G+    +  G  H+      +      
Sbjct: 333 DGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHS------LTAASDE 386

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
           N      +TWG    G+LG+   +  L+P  ++R 
Sbjct: 387 NT-----YTWGANSFGQLGNGTSDGSLVPVAISRF 416



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 13/181 (7%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE   GG +G    GS+S+         P L+ +   +    +S G  H+  V  +G+ 
Sbjct: 235 WGE-ARGGQLG---IGSISRTPA------PALVSAPAGVSFTQVSAGDLHSLAVGSDGKA 284

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG    G+LG+        P LV  + G+ V  VS G   + A+   G  Y WG N +
Sbjct: 285 YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVN 344

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G     +  +P  +    DGV  +++  G  H+   ++    +T+G  +FG LG+
Sbjct: 345 GQ--LGNNTITTSTVP-VMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGN 401

Query: 404 G 404
           G
Sbjct: 402 G 402


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 134/243 (55%), Gaps = 20/243 (8%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + V +I+ G+ H+A +T  G V  WG+G+ GRLGH  + D   PKLVE L G     ++C
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60

Query: 322 G--EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           G  + QT  +T    +++WG  ++G   +G   S    LP K+ ++L G+ V KV CG  
Sbjct: 61  GSGDAQTLCITDDDNVWSWGDGDYGK--LGRGGSDGCKLPYKI-ESLAGLGVVKVECGSQ 117

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            +  ++ SG ++T+G G F  LGHG++ +V +PK+V +L+G K+ S+A G  H  A  D 
Sbjct: 118 FSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD- 176

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTV 497
                      G+++TWGD D+G+LG  DG    +  P  V  L     V+ +CG   T+
Sbjct: 177 ----------SGEVYTWGDNDEGQLG--DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTL 224

Query: 498 GLT 500
            L+
Sbjct: 225 ALS 227



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 17/237 (7%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V+ +ACG  H+A ++ SG + T+G G +G LGHG+ ++  +PK VE+L G +   +ACG 
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
                +       C ++     +++WGD D G+LG    +   LP  +  L     V+  
Sbjct: 63  GDAQTL-------CITD--DDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 113

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSY 546
           CG   +V LT  G VYT G     +LG+       + + +  ++GK     +  I++GS 
Sbjct: 114 CGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK----IISIATGSL 169

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H    +  G VYTWG N  GQLG G     + P  V AL+ + +  V CGS+ T A+
Sbjct: 170 HCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 226



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG+G  G    G  DG            LP  +ES   L V  +  G++ +  +TK
Sbjct: 75  NVWSWGDGDYGKLGRGGSDG----------CKLPYKIESLAGLGVVKVECGSQFSVALTK 124

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G V+ WG+G   RLGH     V  PK V  L G  + S++ G     A + SGE+YTWG
Sbjct: 125 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 184

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            N+ G   +G+    +   PR L   L G  + KV CG  HT  +STS
Sbjct: 185 DNDEGQ--LGDGTVTAIQRPR-LVAALQGKHIVKVTCGSAHTLALSTS 229



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V  I+ GS H A +T+ G V TWGK   G+LG GDS+++  P  VEAL   +   + CGS
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 598 SITAAICLHKSISV-----GDQSSCSQ-----CRMPF 624
                +C+    +V     GD     +     C++P+
Sbjct: 63  GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 99


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 152/334 (45%), Gaps = 34/334 (10%)

Query: 283 VFCWGEGKDGRLGHKVNMD-------VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           ++ WG G +G LG     D       VS P+ V       V+ V+CG   T  L  +G +
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           Y+ G N+ G   +G+ RS      RKL     L    +  VACGE H+  +S +GQ+F++
Sbjct: 107 YSCGANDFGQ--LGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 159

Query: 394 GDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           G    G LG G  +    +PK ++ L  L +  +ACG  H           C + A  G+
Sbjct: 160 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH-----------CLALANNGE 208

Query: 453 LFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           LF+WG    G+LG        ER  LP  V+ LV       +CG M +VGLT  G V+  
Sbjct: 209 LFSWGGNASGQLGLGRDSTGNER--LPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVW 266

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQLG    +DR    V   L+ + +K +  G  H A LT+ G V+T+G    GQL
Sbjct: 267 GRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQL 326

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           G G       P  V  L    +  + CG   T A
Sbjct: 327 GHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVA 360



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 43/393 (10%)

Query: 203 VTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAV-- 260
           +TP  G+P++        +  WG G   G++G      ++Q K  VD   P      V  
Sbjct: 37  LTPGSGAPML--------LYSWGLGP-NGELG------LTQGKDGVDTETPVSQPERVRR 81

Query: 261 --MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINV 316
                V+ ++ G KH  ++   G V+  G    G+LG     D S  KL  V  LS   +
Sbjct: 82  FGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQ----DRSMRKLEQVAALSAHEI 137

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++V+CGE  + AL+ +G++++WG N +G    G E  SR   L  K+   L  + + ++A
Sbjct: 138 RAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESR---LRPKVIKKLATLHIVQIA 194

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           CG  H   ++ +G+LF++G    G LG G  +  N   P+ V  L G+ +  VACG  H+
Sbjct: 195 CGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHS 254

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
             +              G +F WG    G+LG  D   +L PT +  L         CG 
Sbjct: 255 VGLTP-----------SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGE 303

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLT 552
             T  LT  G V+T G+  +GQLG+    + ++     +L    +  +S G  H VA   
Sbjct: 304 NHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAP 363

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
             G +Y +G   +GQLG G  +    P  V  L
Sbjct: 364 QSGRLYIFGLGMSGQLGNGTLESSALPVTVPGL 396



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 26/241 (10%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  HT ++  +G +++ G   FG LG    +++ + ++V +L   ++++VACG 
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGE 144

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQA 489
            H+ A+ D            G++F+WG    G+LG   + E +L P  + +L     VQ 
Sbjct: 145 AHSLALSD-----------AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 193

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLG-------NPKAKDRSITVVEGKLKEEFVKGIS 542
           +CG +  + L   G++++ G    GQLG       N +   R   +V   L       ++
Sbjct: 194 ACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLAL-----VA 248

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G+ H   LT  G+V+ WG+N+ GQLGL D ++R  PT ++ LR ++++ V CG + TAA
Sbjct: 249 CGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAA 308

Query: 603 I 603
           +
Sbjct: 309 L 309


>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
          Length = 660

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 191/408 (46%), Gaps = 57/408 (13%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALL--PKLLESAVMLDVQNISLGAKHAALVT 278
           V  WG+   G       + S SQ K Q  +    PK LE    + ++ IS    H++ V+
Sbjct: 60  VYAWGKNEYG-------ELSFSQTKQQFYSKPENPKNLEK---IYIKQISTSQNHSSCVS 109

Query: 279 KEGEVFCWGEGKDGRLG-HKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
             G+++  G    G+LG   + M +++  +++  L GI V  V+CG++ T ALT++ ++Y
Sbjct: 110 SNGDLYVCGSALHGKLGLENLTMANINKFQILTALKGIKVLQVACGDYHTLALTENDQVY 169

Query: 337 TWGHNNHGADLVGERRSRS---HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            WG   +    VG+R  +    H L  K         V+ + CG++H+  ++  G ++T+
Sbjct: 170 AWGGTLYKK--VGQRGGKPGPIHQLTNK--------GVTYIDCGDFHSVAITNQGDIYTW 219

Query: 394 GDG----TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           G G      G LG G+++++  P++++  +  KV  V+CG +HT A++D           
Sbjct: 220 GGGGQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMALID----------- 268

Query: 450 GGKLFTWGDADKGRLG-------------HVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
             +L+ WG  + G LG              +  +   +        D       CG   T
Sbjct: 269 DNQLYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKKDPQISDIKCGGHHT 328

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           + L  +G VY+ G   +GQLG     +     +V    K++ +K I++G  H  VLT   
Sbjct: 329 LILLNIGYVYSTGYGSYGQLGLKTTNNHCEFQLVWTLTKKKIIK-IAAGWNHSLVLTDTN 387

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            V++ G NA GQLGLGD + R   T + AL  + V  +  G S + AI
Sbjct: 388 DVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVVEISAGGSHSWAI 435


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 167/367 (45%), Gaps = 27/367 (7%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            PK L   +  ++  +S G++H   +T  G V+ WG G  G+LGH     ++ P+ +   
Sbjct: 43  FPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFF 102

Query: 312 S--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGERRSRSHWLPRK--LFDTL 366
              G+ V  VSCG   + A+T  G +Y WG  + G   L  E  +     P K  L + +
Sbjct: 103 EQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGV 162

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN----------LQNVSQPKEVE 416
               V KV+CG  HTA ++  G+++ +G G  G LG G+          L  VS+P  VE
Sbjct: 163 ADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVE 222

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
              G KV  VACG +H+AA+ +            G ++ WG  D G LG      +  P 
Sbjct: 223 GFNGEKVVQVACGAFHSAAVTEQ-----------GHVYIWGKEDYGMLGVGQTSDQQTPK 271

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V    D   ++ SCG   T+ +   G  Y  G   +G+LG    K R+   +   LK +
Sbjct: 272 RVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQ 331

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V   + G  H   +TS G  Y  G+  +G+LG+ D +    PT ++ L    V  V  G
Sbjct: 332 TVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD-LGPIPVRQVSAG 390

Query: 597 SSITAAI 603
            + + A+
Sbjct: 391 GAHSMAL 397



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 12/223 (5%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALL----PKLLESAVMLDVQNISLGAKH 273
           L  V +WG G    D G    GS     T  + LL    P L+E      V  ++ GA H
Sbjct: 183 LGRVYVWGRG----DSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFH 238

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           +A VT++G V+ WG+   G LG     D   PK VE    I    VSCG + T  + KSG
Sbjct: 239 SAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSG 298

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           + Y +G   +G   +G+ +SR+      L   L G  V + ACG  HT  V++ G  +  
Sbjct: 299 DCYAFGRGEYGRLGLGDTKSRTR---PHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVA 355

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G    G LG  +++ +S P  ++ L  + V+ V+ G  H+ A+
Sbjct: 356 GRPDHGRLGMTDMKPLSVPTRLD-LGPIPVRQVSAGGAHSMAL 397


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 152/334 (45%), Gaps = 34/334 (10%)

Query: 283 VFCWGEGKDGRLGHKVNMD-------VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           ++ WG G +G LG     D       VS P+ V       V+ V+CG   T  L  +G +
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           Y+ G N+ G   +G+ RS      RKL     L    +  VACGE H+  +S +GQ+F++
Sbjct: 113 YSCGANDFGQ--LGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 165

Query: 394 GDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           G    G LG G  +    +PK ++ L  L +  +ACG  H           C + A  G+
Sbjct: 166 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH-----------CLALANNGE 214

Query: 453 LFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           LF+WG    G+LG        ER  LP  V+ LV       +CG M +VGLT  G V+  
Sbjct: 215 LFSWGGNASGQLGLGRDSTGNER--LPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVW 272

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQLG    +DR    V   L+ + +K +  G  H A LT+ G V+T+G    GQL
Sbjct: 273 GRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQL 332

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           G G       P  V  L    +  + CG   T A
Sbjct: 333 GHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVA 366



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 43/393 (10%)

Query: 203 VTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAV-- 260
           +TP  G+P++        +  WG G   G++G      ++Q K  VD   P      V  
Sbjct: 43  LTPGSGAPML--------LYSWGLGP-NGELG------LTQGKDGVDTETPVSQPERVRR 87

Query: 261 --MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINV 316
                V+ ++ G KH  ++   G V+  G    G+LG     D S  KL  V  LS   +
Sbjct: 88  FGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQ----DRSMRKLEQVAALSAHEI 143

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG-ERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++V+CGE  + AL+ +G++++WG N +G    G E  SR   L  K+   L  + + ++A
Sbjct: 144 RAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESR---LRPKVIKKLATLHIVQIA 200

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           CG  H   ++ +G+LF++G    G LG G  +  N   P+ V  L G+ +  VACG  H+
Sbjct: 201 CGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHS 260

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
             +              G +F WG    G+LG  D   +L PT +  L         CG 
Sbjct: 261 VGLTP-----------SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGE 309

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLT 552
             T  LT  G V+T G+  +GQLG+    + ++     +L    +  +S G  H VA   
Sbjct: 310 NHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAP 369

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
             G +Y +G   +GQLG G  +    P  V  L
Sbjct: 370 QSGRLYIFGLGMSGQLGNGTLESSALPVTVPGL 402



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 26/241 (10%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  HT ++  +G +++ G   FG LG    +++ + ++V +L   ++++VACG 
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGE 150

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQA 489
            H+ A+ D            G++F+WG    G+LG   + E +L P  + +L     VQ 
Sbjct: 151 AHSLALSD-----------AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQI 199

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLG-------NPKAKDRSITVVEGKLKEEFVKGIS 542
           +CG +  + L   G++++ G    GQLG       N +   R   +V   L       ++
Sbjct: 200 ACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLAL-----VA 254

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G+ H   LT  G+V+ WG+N+ GQLGL D ++R  PT ++ LR ++++ V CG + TAA
Sbjct: 255 CGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAA 314

Query: 603 I 603
           +
Sbjct: 315 L 315


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 169/344 (49%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA H  +++ +G+ F +    D  + H  +  +        L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSESI--------LQ 135

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L GV ++
Sbjct: 136 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLA 193

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG G+ ++   P  +E+L   KV+ +ACG  H
Sbjct: 194 QISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV     Q +CG
Sbjct: 254 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 302

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN    D+ I +       E +K  S  S    ++
Sbjct: 303 RWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIM 362

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 363 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 402



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G V+ W
Sbjct: 155 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSW 214

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ ++CG   +  LT+ G ++T+G   HG  
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ- 273

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 274 -LGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGG 331

Query: 406 L--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
              Q +  P +V S   LK++S      HT+    IM+
Sbjct: 332 TLDQLIPLPVKVSSSEELKLES------HTSEKELIMI 363



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 3/119 (2%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSG 544
           +Q +CG   ++ L+  G+++  G  +HGQLG  +    + T  +VE  L    +  IS+G
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPLAQISAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             H   L+  G+VY+WGKN  GQLGLG ++ +++P+ +EAL +++VE + CG S +A +
Sbjct: 199 EAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 36/252 (14%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGADHMLILSSDGKPFEYDYS----MKHLRSESILQEK--------KIIQITC 144

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 145 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 190

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G VY+ G    GQLG  + ++KD S +++E  L  + V+ ++
Sbjct: 191 PLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKD-SPSLIEA-LDNQKVEFLA 248

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 249 CGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 308

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 309 YVSDLGKVFSFG 320


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 152/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ +V   P+  E   G  V+ V CG   T  L + G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G  ++R    P ++  +LD   +  V+CGE HT  ++  GQ+F +G G+ G 
Sbjct: 61  NDLGQ--LGHEKARKK--PEQVV-SLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG   +++ +  P+ V+SL  + +  VACG WH+ A+           A GG++F+WG  
Sbjct: 116 LGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLAL-----------ARGGEIFSWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG    G     P  +  L    F Q S G   + GLT  G ++  G    GQLG 
Sbjct: 165 KYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               DR   V+   L+ + V  I  G  H A LT  G V+T+G    GQLG   +     
Sbjct: 225 GDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L    V  + CG   T A 
Sbjct: 285 PRKVFELMGSVVSQIACGRQHTLAF 309



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 183/403 (45%), Gaps = 35/403 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  V         L P+  E      V+++  G +H   + ++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEV--------LLEPRRCEFFEGKRVRDVGCGRRHTVFLLED 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+       P+ V  L   N+ +VSCGE  T AL   G+++ WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKARKK--PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGL 110

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G  L          +PR +  +L  V +++VACG WH+  ++  G++F++G   +G 
Sbjct: 111 GSDG-QLGLSIVEDCLRVPRTV-KSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQ 168

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G     V  P+ ++SL+G+    ++ G  H+  +            + G +F WG  
Sbjct: 169 LGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGL-----------TLSGAIFGWGRN 217

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-- 517
             G+LG  D + +  P  +  L     V   CG   T  LT  G V+T G+  +GQLG  
Sbjct: 218 KFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 518 --NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQ 574
             N +   R +  + G +    V  I+ G  H +A + S G + ++G   NGQLG   + 
Sbjct: 278 STNHEVNPRKVFELMGSV----VSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTC 333

Query: 575 ERETPTFVEALRDRQVESVV--CGSSITAAICLHKSISVGDQS 615
            R +PT V+       +  V  C S    + C+ +  + GDQS
Sbjct: 334 NRISPTPVKGCWRAHADPCVELCISEAERSYCVKRIYAGGDQS 376


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 44/343 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEF 324
           +S G+ H+A +++ GE++ WG    G LGH     ++VSCP+++  L    + SVSCG  
Sbjct: 226 VSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSLQRTRIVSVSCGAN 285

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            T A++++G++++ G   HG    G        +   L DT+   RV  VA G  H+  +
Sbjct: 286 HTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLM---LVDTIRHERVVSVAAGRAHSVAL 342

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQ-----------PKEVESLRGLKVK------SVA 427
           +  G++FT+GD + G LGH  L  V Q           P+ ++SL   ++K      ++A
Sbjct: 343 AADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIA 402

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG--RLGHVDGERKLLPTCVTRLVDFD 485
            G  H+ A+            + G L  +G    G  RLG  D   +++PT V   ++ +
Sbjct: 403 AGGDHSMAVT-----------VAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESE 451

Query: 486 ------FVQASCGRMLTVGLT---GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
                  +Q  CG   T+ L    G  +V ++G   +G+LG     +R        LK +
Sbjct: 452 GGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGK 511

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            +  +S G +H A +   G +Y WG+   GQLGLGD + R  P
Sbjct: 512 SIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAP 554



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 170/406 (41%), Gaps = 70/406 (17%)

Query: 267 ISLGAKHAALV-------TKEGEVFCWGEGKDGRLGHK-------------VNMDVSCPK 306
           I+LG  H   +         E  ++  G G  G+LG +             V  DV  P 
Sbjct: 154 IALGTYHTVGLLCQPEQAAPEYAMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPL 213

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP-----RK 361
                  I++  VS G   + ++++ GE+YTWG  + G            W P      +
Sbjct: 214 YQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSG------ELGHGGWTPIEVSCPR 267

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           +  +L   R+  V+CG  HT  +S +GQL++ G G  G LGHG+  +      V+++R  
Sbjct: 268 MITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHE 327

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-------- 473
           +V SVA G  H+ A+           A  GK+FTWGDA KG+LGH      +        
Sbjct: 328 RVVSVAAGRAHSVAL-----------AADGKIFTWGDASKGQLGHAQLAAVMQGPNPQPL 376

Query: 474 ---LPTCV-----TRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQ--LGNPKAK 522
               P  +      RL     V A + G   ++ +T  G +   GS  HGQ  LG     
Sbjct: 377 SIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTL 436

Query: 523 DRSI-TVVEGKLKEE---FVKG--ISSGSYHVAVLT---SGGSVYTWGKNANGQLGLGDS 573
           DR I T V   L+ E    V+   +  G+ H   L        V + G N+ G+LGLGD 
Sbjct: 437 DRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDR 496

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            ER     + AL+ + +  V  G    AAIC    + V  +  C Q
Sbjct: 497 LERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQ 542



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 36/304 (11%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T ++   P+++ S     + ++S GA H   +++ G+++  G G+ G+LGH    D    
Sbjct: 259 TPIEVSCPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLL 318

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRK 361
            LV+ +    V SV+ G   + AL   G+I+TWG  + G    A L    +  +   P+ 
Sbjct: 319 MLVDTIRHERVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGPN---PQP 375

Query: 362 L-------FDTLD------GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV--LGHGNL 406
           L         +L+        RV+ +A G  H+  V+ +G L  +G    G   LG G+ 
Sbjct: 376 LSIPFPQAIQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDT 435

Query: 407 QNVSQPKEV----ESLRGLKVKS--VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            +   P EV    ES  G  V++  V CG  HT A+V +     +  ++GG  +      
Sbjct: 436 LDRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQVQ-GHHQVRSVGGNSY------ 488

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G LG  D   +     +  L     V  S G      +   G++Y  G    GQLG   
Sbjct: 489 -GELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGD 547

Query: 521 AKDR 524
            ++R
Sbjct: 548 DRNR 551



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 14/163 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDG--RLGHKVNMD----VSCPKLVECLSG--IN 315
           V  I+ G  H+  VT  G +  +G  K G  RLG    +D       P  +E   G  + 
Sbjct: 398 VTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVR 457

Query: 316 VQSVSCGEFQTCALTK---SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V CG   T AL +     ++ + G N++G   +G+R  R  + P      L G  + 
Sbjct: 458 AMQVHCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHP---IPALKGKSIV 514

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            V+ G+WH A +   G+L+ +G G  G LG G+ +N   PK++
Sbjct: 515 CVSVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPKQL 557


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 180/386 (46%), Gaps = 27/386 (6%)

Query: 202 LVTPTYGSPLIERKDILKDVMIWGEGVLG-GDIGGAVDGSVSQNKTQVDALLPKLLESAV 260
           +VT  Y   +      ++ ++ WG   LG   I   + G V++         P++     
Sbjct: 436 IVTAAYYLAVFVDVSWIRTMLCWGYWSLGQPGISSNLQGIVAE---------PQVCGFIA 486

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
              V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+
Sbjct: 487 DRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVA 544

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           CGE  + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH
Sbjct: 545 CGESHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 602

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
              ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+   
Sbjct: 603 CLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL--- 659

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                   ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  L
Sbjct: 660 --------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 711

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVY 558
           T  G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y
Sbjct: 712 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 771

Query: 559 TWGKNANGQLGLGDSQERETPTFVEA 584
            +G  A GQLG G +   + P+ V+ 
Sbjct: 772 AFGCGARGQLGTGHTCNVKCPSPVKG 797



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   ++  +V+ V+CG   +  L + GE+YT G 
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGL 514

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 515 NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 569

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 570 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 618

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 619 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 678

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 679 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 738

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 739 PRRVLELMGSEVTQIACGRQHTLAF 763



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 547

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 548 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 596

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 597 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 652

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 653 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 713 KSGGVFTFGAGSCGQ 727


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 15/258 (5%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
           G+ H  +V + G++F WG   +G+LG  +V+  +  P++V+ L    +  ++CG   + A
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           LT +GE+Y WG N+ G   +G        L  KL  +L  V ++ VACG +HT ++S SG
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKME--LKPKLVHSLAAVPIAFVACGGYHTIVISKSG 209

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            +F +G  TFG LG  ++QN + P ++ +LR  +V   ACG   +  +            
Sbjct: 210 AVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFL-----------T 258

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVYT 507
           + G +FT G    G+LGH +   ++LP  +  L+     Q SCGR  T+ L    G+VY 
Sbjct: 259 MDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYA 318

Query: 508 MGSAVHGQLGNPKAKDRS 525
            G    GQLGN  A++ +
Sbjct: 319 WGLGGAGQLGNRIAQNST 336



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 23/325 (7%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN---VQSV 319
           +++ I+ G  +   VTKEG+V+  G    G+LG +        K ++ +SGI+    +  
Sbjct: 35  EIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGR-----KRLQLISGIDPLAFRKA 89

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           +CG   T  + + G++++WG N  G  L  +R S +   PR +  TL    + ++ACG  
Sbjct: 90  ACGSSHTLVVNEWGQLFSWGSNVEG-QLGLDRVSATIREPR-MVKTLGTKIIVQIACGLK 147

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVD 438
           H+  ++ +G+L+ +G  + G LG G+   +  +PK V SL  + +  VACG +HT  I  
Sbjct: 148 HSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVI-- 205

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                    +  G +F WG    G+LG  D + + +P  +  L +     A+CG   +V 
Sbjct: 206 ---------SKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVF 256

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSV 557
           LT  G V+T G+ ++GQLG+       +     +L    V  IS G  H +A++ S G V
Sbjct: 257 LTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRV 316

Query: 558 YTWGKNANGQLGLGDSQERETPTFV 582
           Y WG    GQLG   +Q   TP  V
Sbjct: 317 YAWGLGGAGQLGNRIAQNSTTPQVV 341



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +FCWG    G LG     D  +  P+ V       ++ ++CG+  T A+TK G++Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+HG   +G+ + R      +L   +D +   K ACG  HT +V+  GQLF++G    G 
Sbjct: 61  NDHGQ--LGQEKGRKRL---QLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115

Query: 401 LGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG   +   + +P+ V++L    +  +ACG  H+ A+ +            G+L+ WG  
Sbjct: 116 LGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTN-----------NGELYAWGSN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   D + +L P  V  L        +CG   T+ ++  G V+  G    GQLG 
Sbjct: 165 SDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              ++R++      L+   V   + G      LT  G V+T G    GQLG G+      
Sbjct: 225 SDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  +  L    V  + CG   T A+
Sbjct: 285 PRQIMELMGSTVTQISCGRRHTLAL 309



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 14/246 (5%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G  V+G +  ++       P+++++     +  I+ G KH+  +T  GE++ WG   DG+
Sbjct: 109 GSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQ 168

Query: 294 LGHKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG   +  +   PKLV  L+ + +  V+CG + T  ++KSG ++ WG N  G   + + +
Sbjct: 169 LGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQ 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           +R+  +P +L  TL   RV   ACGE  +  ++  G +FT G G +G LGHGN  +   P
Sbjct: 229 NRN--VPCQL-RTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           +++  L G  V  ++CG  HT A+V             G+++ WG    G+LG+   +  
Sbjct: 286 RQIMELMGSTVTQISCGRRHTLALV----------PSRGRVYAWGLGGAGQLGNRIAQNS 335

Query: 473 LLPTCV 478
             P  V
Sbjct: 336 TTPQVV 341



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 26/278 (9%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++ WG   HG   +G     + + PR++ F+  +   + ++ACG+ +T  V+  GQ+++ 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKAN--EIEQIACGDNYTIAVTKEGQVYSC 58

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G+   G LG    +   + + +  +  L  +  ACG  HT  + +            G+L
Sbjct: 59  GNNDHGQLGQE--KGRKRLQLISGIDPLAFRKAACGSSHTLVVNE-----------WGQL 105

Query: 454 FTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           F+WG   +G+LG         E +++ T  T+++    VQ +CG   ++ LT  G++Y  
Sbjct: 106 FSWGSNVEGQLGLDRVSATIREPRMVKTLGTKII----VQIACGLKHSIALTNNGELYAW 161

Query: 509 GSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
           GS   GQLG     K      +   L    +  ++ G YH  V++  G+V+ WG+N  GQ
Sbjct: 162 GSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQ 221

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           LGL D Q R  P  +  LR+ +V    CG   +  + +
Sbjct: 222 LGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTM 259



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +         L PKL+ S   + +  ++ G  H  +++K G VF WG    G+
Sbjct: 162 GSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQ 221

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LG     + + P  +  L    V   +CGE  +  LT  G ++T G   +G   +G    
Sbjct: 222 LGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQ--LGHGNK 279

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            S  LPR++ + L G  V++++CG  HT A+V + G+++ +G G  G LG+   QN + P
Sbjct: 280 TSEILPRQIME-LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTP 338

Query: 413 KEVESLRGLKVKSVACGPW 431
           +            V  GPW
Sbjct: 339 Q------------VVFGPW 345


>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
 gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
           SB210]
          Length = 1146

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 174/357 (48%), Gaps = 36/357 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNM-DVSCPKLVECLSGINVQSVSC 321
           ++ IS    H+A ++  GE++  G    G+LG  ++ M +++  +++    GI V  V+C
Sbjct: 580 IKQISTSQNHSACISANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVAC 639

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G++ T ALT + ++Y+WG   H    VG+R  +   + +     L+   V +V CG++H+
Sbjct: 640 GDYHTLALTDTDQVYSWGGTLHKK--VGQRSGKPAPIQQ-----LNKKGVIQVDCGDYHS 692

Query: 382 AIVSTSGQLFTYG----DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           A ++ +G ++T+G    D   G LG G+++++  P++++   G K+  V+CG +HT A+ 
Sbjct: 693 AAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALT 752

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR----------LVDFDFV 487
                         +LF WG  + G LG    E   +   V            L +    
Sbjct: 753 S-----------ENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQ 801

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSY 546
              CG   T+ LT  G +Y+ G    GQLG   ++++    +V    K++ +K I++G  
Sbjct: 802 NIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIK-IAAGWN 860

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   L+    ++  G  A GQLGLGD + R   T V +L  +   ++  G   + A+
Sbjct: 861 HSLALSDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAV 917



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 165/357 (46%), Gaps = 46/357 (12%)

Query: 283 VFCWGEGKDGRL--GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +F WG+ + G L  G++     + P+  + L  I ++ +S  +  +  ++ +GE+Y  G 
Sbjct: 545 IFAWGKNESGELSFGNQKQPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCGS 604

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             HG  L  E  + ++    ++     G++V +VACG++HT  ++ + Q++++G    G 
Sbjct: 605 ALHGK-LGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVYSWG----GT 659

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG--- 457
           L     Q   +P  ++ L    V  V CG +H+AAI              G ++TWG   
Sbjct: 660 LHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHSAAITQ-----------NGDIYTWGGGG 708

Query: 458 -DADKGR--LGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            D +KG+  LGHV D E    P  +        V+ SCG+  T+ LT   +++  G+   
Sbjct: 709 QDYNKGQLGLGHVKDIEN---PEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEF 765

Query: 514 GQLGNPKAKDRSITV----------VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           G+LG  K +   I V           E  L E  ++ I  G +H  +LT+ G +Y+ G  
Sbjct: 766 GELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYG 825

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
             GQLGL +S+ +     V  L  +++  +  G         + S+++ DQ+    C
Sbjct: 826 RQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAG--------WNHSLALSDQNDIFAC 874



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 19/229 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           D+  WG G    + G    G V       D   P+ L+      +  +S G  H   +T 
Sbjct: 700 DIYTWGGGGQDYNKGQLGLGHVK------DIENPEKLKFFEGKKIVKVSCGQFHTMALTS 753

Query: 280 EGEVFCWGEGKDGRLGH----------KVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           E E+F WG G+ G LG           KVN +         L   ++Q++ CG   T  L
Sbjct: 754 ENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLL 813

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           T +G IY+ G+   G   +G R S +     +L  TL   ++ K+A G  H+  +S    
Sbjct: 814 TNNGYIYSSGYGRQGQ--LGLRNSENQ-CEFQLVWTLTKKKIIKIAAGWNHSLALSDQND 870

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           +F  G G  G LG G+ ++ +    V SL G    +++ G  H+ A++D
Sbjct: 871 IFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAVLD 919


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 35/350 (10%)

Query: 262 LDVQNISLGAKH---AA------LVTKEGEVFCWGE-GKDGRLGHKVNMDVSCPKLVECL 311
           + VQ + +GA +   AA      L+T   E++ WG  G    L  + +  +  P L E  
Sbjct: 78  VPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRRDKRIYYPTLCEPA 137

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
             + +  +  G     AL+K+GE+Y WG++  G   +G + ++   LP ++ +      +
Sbjct: 138 QSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQH--LPIRM-EFFRDKSI 194

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
             V+CG  H+A VS  G+++T+G G  G LGH   ++  +PKE+  +RG  +  V CG  
Sbjct: 195 VDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTD 254

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQAS 490
            T  +          N   G+LFT+G+ + G+LGH  GER L L   V  L +   V A 
Sbjct: 255 FTGLL----------NETEGRLFTFGNGEAGQLGH--GERGLCLEPSVVPLDNVKEVAAG 302

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGSY 546
              ML   LT  G+ ++ G    G+LG+   +D      I  +   +    V  +S+G  
Sbjct: 303 GAHMLA--LTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVG---VVSVSAGGG 357

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           H   LT  G VY WG NA+G+LGLG+     TPT ++AL D++V   +CG
Sbjct: 358 HSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICG 407



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L E A  L +  I  G +H   ++K GEV+ WG  + G+ G         P  +E   
Sbjct: 131 PTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEFFR 190

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             ++  VSCG   + A++K G ++TWG+   G   +G   +     P++L   + G  +S
Sbjct: 191 DKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQ--LGHNGTEDELKPKEL-TVIRGEGIS 247

Query: 373 KVACGEWHTAIVS-TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V CG   T +++ T G+LFT+G+G  G LGHG      +P  V       VK VA G  
Sbjct: 248 RVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL---DNVKEVAAGGA 304

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQAS 490
           H  A+              G+ ++WG  + GRLGH   E  L P  +  L      V  S
Sbjct: 305 HMLALTK-----------DGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVS 353

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            G   ++ LT  G+VY  G    G+LG
Sbjct: 354 AGGGHSLALTESGQVYGWGFNASGRLG 380



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 23/245 (9%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP  +E      + ++S G  H+A V+K+G V+ WG G DG+LGH    D   PK +  +
Sbjct: 182 LPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVI 241

Query: 312 SGINVQSVSCGEFQTCALTKS-GEIYTWGHNNHGADLVGERR--SRSHWLPRKLFDTLDG 368
            G  +  V+CG   T  L ++ G ++T+G+   G    GER        +P      LD 
Sbjct: 242 RGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVP------LDN 295

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVA 427
           V+  +VA G  H   ++  GQ +++G G  G LGHG  ++  +P+ + +L   + V SV+
Sbjct: 296 VK--EVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVS 353

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            G  H+ A+ +            G+++ WG    GRLG  +    + PT +  L D   +
Sbjct: 354 AGGGHSLALTE-----------SGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVL 402

Query: 488 QASCG 492
           +A CG
Sbjct: 403 RAICG 407



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 18/225 (8%)

Query: 384 VSTSGQ-LFTYGDGTFGVLGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMV 441
           V   GQ ++T G G    LG G+L++   P  V+ L  G      A G W    ++    
Sbjct: 48  VPKPGQGVYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAG-WTQNFLLTTRH 106

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLT 500
           +          L+ WG +    L  +  ++++  PT          V+   GR   + L+
Sbjct: 107 E----------LYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALS 156

Query: 501 GLGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
             G+VY  G++  GQ  LGN +A+   I +     +++ +  +S G  H A ++  G V+
Sbjct: 157 KNGEVYIWGNSEFGQTGLGNKEAQHLPIRME--FFRDKSIVDVSCGLDHSAAVSKDGRVW 214

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           TWG   +GQLG   +++   P  +  +R   +  V CG+  T  +
Sbjct: 215 TWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLL 259



 Score = 43.1 bits (100), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 238 DGSVSQNKTQVDALLPKLLES-AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           DG +    T+ D L P+ + +    + V ++S G  H+  +T+ G+V+ WG    GRLG 
Sbjct: 323 DGRLGHGATE-DFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGL 381

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
                V  P L++ L+   V    CG   +  +T++
Sbjct: 382 GNESSVMTPTLIKALADKRVLRAICGLDHSLFITQA 417


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 166/375 (44%), Gaps = 35/375 (9%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + +G+   G L H   +D + P  +     + +  V+CG  QT  L ++G+++T G+N+ 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73

Query: 344 GADLVG--ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           G   +G   R      +P  + + +  +R +    G  H   +S SG L+T+G  + G L
Sbjct: 74  GQCGIGSTSRVQSLRLVPALVTEDIAHIRSAN---GCEHLTAISRSGALYTFGFNSRGQL 130

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           GHG+   ++ P +++ L    V  VAC  +HT  +            + G L+ +G  D 
Sbjct: 131 GHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVM-----------TMEGTLYAFGRNDL 179

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG  DG  + +P  +T       +  +CG+  TV     G V   G   HGQLG    
Sbjct: 180 GQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYT 239

Query: 522 KDR--SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            D   S +++   L    V  ++ G YH   L   GSVY++G+N  GQLG G       P
Sbjct: 240 LDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEP 299

Query: 580 TFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLH 639
           T ++AL       V CG       C H  +   D         PFG  R  H     GL 
Sbjct: 300 TLIKALAKTHAVQVTCG-------CYHTLVLSEDGKV-----YPFG--RNNHG--QLGLG 343

Query: 640 FCSACSTKKIINASL 654
               C++ +II ASL
Sbjct: 344 NLIDCTSPQII-ASL 357



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 168/371 (45%), Gaps = 21/371 (5%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G +  N T VD  LP  +     + + +++ G +  A + + G+VF  G    G+ G   
Sbjct: 22  GELCHNDT-VDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGS 80

Query: 299 NMDVSCPKLVECLSGINVQSV--SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
              V   +LV  L   ++  +  + G     A+++SG +YT+G N+ G   +G   +   
Sbjct: 81  TSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQ--LGHGSTNPI 138

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
             P K+ D L    V +VAC  +HT +++  G L+ +G    G LG  +  +   P  + 
Sbjct: 139 TTPTKIKD-LASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLT 197

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLP 475
                 V +VACG  HT             +   G +  +G  D G+LG     +    P
Sbjct: 198 YFNSRPVLAVACGQHHTVV-----------SLTNGGVVAFGKNDHGQLGTGYTLDYHASP 246

Query: 476 TCVTRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
           + +   +D   V + +CG   T+ L   G VY+ G   +GQLG+      S   +   L 
Sbjct: 247 SLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALA 306

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
           +     ++ G YH  VL+  G VY +G+N +GQLGLG+  +  +P  + +LRD+ V  V 
Sbjct: 307 KTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVKVA 366

Query: 595 CGSSITAAICL 605
            G     +ICL
Sbjct: 367 SG--FYHSICL 375


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  N+  V+CGE
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQNIVHVACGE 140

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 141 SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 198

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 199 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 252

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 253 -----SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 307

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 308 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 368 CGARGQLGTGHTCNVKCPSPVKG 390



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 30/308 (9%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSC 321
           ++ +++ G  H+  ++  G++F WG G DG+LG     D V+ P+L++ L+   +  VSC
Sbjct: 132 NIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSC 191

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G +   AL   G+ +TWG N+HG   +G +   S   P+++  +L+G+ +++VA G  H+
Sbjct: 192 GNWHCLALAADGQFFTWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIPLAQVAAGGAHS 249

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S SG +F +G    G LG  + ++   P  V+ LR  KV  ++CG  HTA +     
Sbjct: 250 FALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK--- 306

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT- 500
                    G +FT+G    G+LGH     ++ P  V  L+  +  Q +CGR  T+    
Sbjct: 307 --------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP 358

Query: 501 GLGKVYTMGSAVHGQLG-----NPK----------AKDRSITVVEGKLKEEFVKGISSGS 545
             G +Y  G    GQLG     N K          A +  ++    + K   VK I SG 
Sbjct: 359 SSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGG 418

Query: 546 YHVAVLTS 553
               VL S
Sbjct: 419 DQTFVLCS 426



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 140/304 (46%), Gaps = 18/304 (5%)

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           V+ P++   +S  +V+ V+CG   +  L + GE+YT G N  G   +G  R  +   P +
Sbjct: 69  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQ--LGHEREGNK--PEQ 124

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRG 420
           +   L    +  VACGE H+  +S  GQLF++G G+ G LG    ++ V+ P+ ++ L  
Sbjct: 125 I-GALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 183

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVT 479
             +  V+CG WH           C + A  G+ FTWG    G+LG   +   +  P  V 
Sbjct: 184 QTILQVSCGNWH-----------CLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 232

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            L      Q + G   +  L+  G V+  G    GQLG    +DR        L+ + V 
Sbjct: 233 SLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV 292

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            IS G  H AVLT  G V+T+G  + GQLG     +   P  V  L   +V  + CG   
Sbjct: 293 YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQH 352

Query: 600 TAAI 603
           T A 
Sbjct: 353 TLAF 356



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQNIVHVACGE 140

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 141 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 189

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 190 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 245

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 246 GAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 306 KSGGVFTFGAGSCGQ 320



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 156 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 215

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 216 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE 275

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 276 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 332

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 333 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 375


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 124/214 (57%), Gaps = 14/214 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC 321
           ++  I+ G  H+  ++K GE+F WG+  DG+LG  ++    S P++VE LSG+ +  +S 
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           GE  + AL+ SG +Y+WG N+ G   +G   ++         +TLD  +V  +ACG  HT
Sbjct: 183 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKD---SPSCIETLDDQKVEFLACGGCHT 239

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A+++ SG +FT+GDG +G LGH + QN  +P+ V  L G +V  +ACG  HT A V    
Sbjct: 240 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV---- 295

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                 +  GK+F++G   +G+LG+     +L+P
Sbjct: 296 ------SDTGKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  G +H  +++ +G+ F            +    +   +    L 
Sbjct: 73  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPF------------EYKYSIEHARFQCILQ 120

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             N+  ++CG++ + AL+K GE++ WG N  G   VG R   S   P ++ + L GV + 
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTP-EIVENLSGVPLV 178

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+  N   P  +E+L   KV+ +ACG  H
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCH 238

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G +FT+GD   G+LGH   + +L P  VT LV     Q +CG
Sbjct: 239 TALLTK-----------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACG 287

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++  GKV++ GS   GQLGN   +++ I      L  E +K  SS S    ++
Sbjct: 288 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELII 347

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W +  N  + L     R+ PT  E    R +  V
Sbjct: 348 VAGGNQSILIWMEKENSYVNL----RRKIPTLNEGTVKRWIADV 387



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 11/190 (5%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  +DG +   +       P+++E+   + +  IS G  H+  ++  G V+ W
Sbjct: 140 GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSW 199

Query: 287 GEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
           G    G+LG  H  N D   P  +E L    V+ ++CG   T  LTKSG ++T+G   +G
Sbjct: 200 GRNDCGQLGLGHTYNKD--SPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYG 257

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGH 403
              +G   +++   PR L   L G RV+++ACG  HT A VS +G++F++G G  G LG+
Sbjct: 258 Q--LGHNSTQNELRPR-LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGN 314

Query: 404 GNLQNVSQPK 413
           G  +N   P+
Sbjct: 315 GGTRNQLIPR 324



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 26/236 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  +  GE H  ++S+ G+ F Y       + H   Q + Q K         +  + C
Sbjct: 82  MKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQCILQEK--------NIIQITC 129

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG   +       P  V  L     
Sbjct: 130 GDYHSLAL-----------SKGGELFAWGQNLDGQLGVGRIFASTST-PEIVENLSGVPL 177

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G   ++ L+  G VY+ G    GQLG     ++        L ++ V+ ++ G  
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGC 237

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           H A+LT  G V+T+G    GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 238 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 293



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 3/121 (2%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGIS 542
           + +Q +CG   ++ L+  G+++  G  + GQLG  +  A   +  +VE       V+ IS
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQ-IS 181

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +G  H   L+  G+VY+WG+N  GQLGLG +  +++P+ +E L D++VE + CG   TA 
Sbjct: 182 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTAL 241

Query: 603 I 603
           +
Sbjct: 242 L 242


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 173/362 (47%), Gaps = 27/362 (7%)

Query: 224 WGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
           WG  + G   +GG  D ++          +P+ ++     +V+ I+ G  +   +TKEG+
Sbjct: 4   WGSTIHGELGLGGIEDENI---------FMPREVDFIEASNVEQIACGENYTVAITKEGK 54

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+  G    G+LGH+        +L+  L     + ++CG   T A+ + G++++WG N 
Sbjct: 55  VYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNM 112

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G  L       +  +PR +   L    + ++ACG  H+  ++  G+L+ +G    G LG
Sbjct: 113 NG-QLGLNSVDCTERVPR-MIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLG 170

Query: 403 HGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
            G+      +PK + +L  + +  +ACG +HT  I           +  G +F+WG    
Sbjct: 171 LGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVI-----------SKSGAVFSWGRNTF 219

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG  D +++ LP  +  L +     A+CG   +V LT  G V+T G+ ++GQLG+   
Sbjct: 220 GQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNT 279

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +  +     +L    V  IS G  H +A++ S G VY WG    GQLG   SQ   TP 
Sbjct: 280 TNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQ 339

Query: 581 FV 582
            V
Sbjct: 340 VV 341



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 152/327 (46%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +FCWG    G LG     D  +  P+ V+ +   NV+ ++CGE  T A+TK G++Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G   +G  ++R      +L   LD     K+ACG  HT  V+  GQLF++G    G 
Sbjct: 61  NDYGQ--LGHEKARKRL---QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115

Query: 401 LGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  ++    + P+ ++ L    +  +ACG  H+ A+ +            G+L+ WG  
Sbjct: 116 LGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN-----------DGELYAWGSN 164

Query: 460 DKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            +G+LG   +   E K  P  ++ L        +CG   T+ ++  G V++ G    GQL
Sbjct: 165 REGQLGLGSYTTTEIK--PKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G    + R++      L+   V   + G      LT  G V+T G    GQLG G++   
Sbjct: 223 GLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T A+
Sbjct: 283 ILPRQVMELMGSTVTQISCGKRHTLAL 309



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 26/278 (9%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           ++ WG   HG   +G     + ++PR++ D ++   V ++ACGE +T  ++  G++++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREV-DFIEASNVEQIACGENYTVAITKEGKVYSCG 59

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +  +G LGH   +   Q   +  L     + +ACG  HT A+ +            G+LF
Sbjct: 60  NNDYGQLGHEKARKRLQL--IPGLDAFVFRKIACGNCHTLAVNE-----------WGQLF 106

Query: 455 TWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +WG    G+LG   VD   ++ P  +  L     VQ +CG   ++ LT  G++Y  GS  
Sbjct: 107 SWGCNMNGQLGLNSVDCTERV-PRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNR 165

Query: 513 HGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            GQLG       + K + I+     L    +  I+ G YH  V++  G+V++WG+N  GQ
Sbjct: 166 EGQLGLGSYTTTEIKPKRIST----LAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQ 221

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           LGL D Q+R  P  +  LR+ +V    CG   +  + +
Sbjct: 222 LGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTM 259


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 17/324 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+ ++ G  H+  + ++GEV+  G    G+LGH  + + S P+ +  L+G ++  V+CG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEGSKPEQIGALAGQHIVHVACG 92

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  + AL+  G++++WG  + G   +G           +L   L+   + +V+CG WH  
Sbjct: 93  ESHSVALSDQGQLFSWGAGSDGQ--LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCL 150

Query: 383 IVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  GQ FT+G  ++G LG G    + + P+ V+SL G+ +  VA G  H+ A+     
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 205

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 ++ G +F WG    G+LG  D   +  P  V  L     V  SCG   T  LT 
Sbjct: 206 ------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK 259

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
            G V+T G+   GQLG+    D        +L    V  I+ G +H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 561 GKNANGQLGLGDSQERETPTFVEA 584
           G    GQLG G +   + P+ V+ 
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 148/328 (45%), Gaps = 26/328 (7%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCP--KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+ V  P  ++   +   NV+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGA---DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N  G    D  G +       P ++   L G  +  VACGE H+  +S  GQLF++G G+
Sbjct: 61  NTKGQLGHDCEGSK-------PEQI-GALAGQHIVHVACGESHSVALSDQGQLFSWGAGS 112

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LG   +++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTW
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH-----------CLALAADGQFFTW 161

Query: 457 GDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G    G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQ
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQ 221

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG    +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +
Sbjct: 222 LGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAI 603
              P  V  L   +V  + CG   T A 
Sbjct: 282 EVNPRRVLELMGSEVSQIACGRHHTLAF 309



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 24/288 (8%)

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG++++G   +G         P +++  +    V +VACG  H+  +   G+++T G  T
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEP-QVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGH      S+P+++ +L G  +  VACG  H+ A+ D            G+LF+WG
Sbjct: 63  KGQLGHDC--EGSKPEQIGALAGQHIVHVACGESHSVALSD-----------QGQLFSWG 109

Query: 458 DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG    E  + +P  + +L     +Q SCG    + L   G+ +T G   +GQL
Sbjct: 110 AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQL 169

Query: 517 GNPK-----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G  K     A  + +  ++G    +    +++G  H   L+  G+V+ WGKN++GQLGL 
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQ----VAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           D ++RE+P  V+ LR ++V  + CG   TA +     +      SC Q
Sbjct: 226 DERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     +    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG N+ G   + + R
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL   L   +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKL---LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFV----------PSSGMIYAFGCGTRGQLG 328


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 26/333 (7%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG--INVQSVS 320
           D+  +S G++H   +T  G V+ WG G  G+LGH     ++ P+ +       + V  +S
Sbjct: 50  DIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYIS 109

Query: 321 CGEFQTCALTKSGEIYTWGHNNHG-ADLVGERRSRSHWLPRK--LFDTLDGVRVSKVACG 377
           CG   + A+TK G +Y WG ++ G   L  E  +    LP K  + +   G  + KV+CG
Sbjct: 110 CGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCG 169

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGN----------LQNVSQPKEVESLRGLKVKSVA 427
             HTA +++ G+++ +G G  G LG G+          L   S+P  +++  G KV  VA
Sbjct: 170 GTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVA 229

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG +H+AA+ +            G ++ WG  D G LG      + +P  +    D   +
Sbjct: 230 CGAFHSAAVTEQ-----------GHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVL 278

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           + SCG   TV +   G  Y  G   +G+LG    K R+   +   LK + V   + G  H
Sbjct: 279 RVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSH 338

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
              +TS G+ Y  G+  +G+LGL D +    PT
Sbjct: 339 TLFVTSDGTAYVAGRPDHGRLGLADMKALGVPT 371



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 148/319 (46%), Gaps = 40/319 (12%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG--------HKVNMDVSCPKLVECLSG 313
           L+V  IS G  H+A VTK+G ++ WGE   G+LG        H+ ++ V CP + E  +G
Sbjct: 103 LEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHE-SLPVKCP-MPEGEAG 160

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE------------RRSRSHWLPRK 361
             +  VSCG   T ALT  G +Y WG  + G   +G               SR H     
Sbjct: 161 ETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPH----- 215

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L    +G +V +VACG +H+A V+  G ++ +G   +G+LG G   +   PK +E    +
Sbjct: 216 LLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDI 275

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            V  V+CG WHT  +           A  G  + +G  + GRLG  D + +  P  V  L
Sbjct: 276 PVLRVSCGGWHTVVV-----------AKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKAL 324

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
                +QA+CG   T+ +T  G  Y  G   HG+LG    K   +      L    V+  
Sbjct: 325 KGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVP-TRLDLGPIPVRQF 383

Query: 542 SSGSYH-VAVLTSGGSVYT 559
           S+G  H VA++ S   +++
Sbjct: 384 SAGGAHSVALMHSSRPIFS 402



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 156/353 (44%), Gaps = 56/353 (15%)

Query: 283 VFCWGEGKDGRLGHKVNM-------DVSC---PKLVECLSGINVQSVSCGEFQTCALTKS 332
           V  +G   DG+LG            DVS    P+ +  L   ++ +VSCG   T ALT S
Sbjct: 8   VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           G +Y+WG  + G    G+ +  +   P+K+ F   + + V  ++CG  H+A V+  G L+
Sbjct: 68  GAVYSWGWGSMGQLGHGDLKIINE--PQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLY 125

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLR--------------GLKVKSVACGPWHTAAIV 437
            +G+  +G LG         PKE E+                G  +  V+CG  HTAA+ 
Sbjct: 126 VWGESHWGQLG--------LPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALT 177

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLG-----HVDGERKLL-----PTCVTRLVDFDFV 487
                        G+++ WG  D G+LG       D E + L     P  +        V
Sbjct: 178 SF-----------GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVV 226

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           Q +CG   +  +T  G VY  G   +G LG  ++ D+ I        +  V  +S G +H
Sbjct: 227 QVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWH 286

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
             V+   G  Y +G+   G+LGLGD++ R  P  V+AL+ + V    CG S T
Sbjct: 287 TVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHT 339



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 29/251 (11%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG--LKVKSVAC 428
           +  V+CG  HT  +++SG ++++G G+ G LGHG+L+ +++P+++       L+V  ++C
Sbjct: 51  IVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISC 110

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG---HVDGERKLLPT-CVTRLVDF 484
           G  H+AA+              G L+ WG++  G+LG     +   + LP  C     + 
Sbjct: 111 GGCHSAAVTK-----------DGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEA 159

Query: 485 D--FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA--KDRSITVVEGKLKEEFVKG 540
               V+ SCG   T  LT  G+VY  G    GQLG      KD     + G  +   +K 
Sbjct: 160 GETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKA 219

Query: 541 --------ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
                   ++ G++H A +T  G VY WGK   G LG+G S +++ P  +E   D  V  
Sbjct: 220 FNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLR 279

Query: 593 VVCGSSITAAI 603
           V CG   T  +
Sbjct: 280 VSCGGWHTVVV 290



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 4/217 (1%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V +WG G  G    G+V     +N++ + A  P LL++     V  ++ GA H+A VT++
Sbjct: 182 VYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQ 241

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+ WG+   G LG   + D   PK +E    I V  VSCG + T  + KSG+ Y +G 
Sbjct: 242 GHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGR 301

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             +G   +G+ +SR+      L   L G  V + ACG  HT  V++ G  +  G    G 
Sbjct: 302 GEYGRLGLGDTKSRTR---PHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGR 358

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           LG  +++ +  P  ++ L  + V+  + G  H+ A++
Sbjct: 359 LGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVALM 394


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 14/213 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
           +  I+ G  H+  ++K GE+F WG+   G+LG  ++   +  P+LVE LSG+ +  +S G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + AL+ SG IY+WG N+ G   +G         P  L + LD  +V  +ACG  HTA
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGED--FP-SLIEALDNQKVEFLACGGSHTA 495

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++  G +FT+G G +G LGH + QN  +P+ V  L G +V  VACG WHT A V  +  
Sbjct: 496 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDL-- 553

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                   GK+F++G   +G+LG+     +L+P
Sbjct: 554 --------GKVFSFGSGKEGQLGNGGTHNQLIP 578



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 158/335 (47%), Gaps = 32/335 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + + ++  GA+H  +++ +G+ F            + N  +   +    L   ++  ++C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPF------------EYNYSIEHARFQCILQEKSIIQITC 384

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G++ + AL+K GE++ WG N HG   VG R   S   P +L + L GV + +++ G+ H+
Sbjct: 385 GDYHSLALSKGGELFAWGQNLHGQLGVG-RLFTSIPTP-QLVEHLSGVPLVQISAGKAHS 442

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S SG ++++G    G LG G+      P  +E+L   KV+ +ACG  HTA +     
Sbjct: 443 MALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK--- 499

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LT 500
                    G +FT+G    G+LGH   + +L P  VT L      Q +CGR  T+  ++
Sbjct: 500 --------DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVS 551

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVY 558
            LGKV++ GS   GQLGN    ++ I +       E +K  S  S    ++ +GG  S+ 
Sbjct: 552 DLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGNQSIL 611

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            W    N  + L     R  PT  E    R +  V
Sbjct: 612 LWMGKKNPYVNL----RRRIPTLNEGTVKRWIADV 642



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 9/202 (4%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+L+E    + +  IS G  H+  ++  G ++ W
Sbjct: 395 GGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSW 454

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G    G+LG         P L+E L    V+ ++CG   T  LTK G ++T+G   +G  
Sbjct: 455 GRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ- 513

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   PR L   L G RV++VACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 514 -LGHNSTQNELRPR-LVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGG 571

Query: 406 LQN--VSQPKEVESLRGLKVKS 425
             N  +  P ++ S   LK +S
Sbjct: 572 THNQLIPLPMKLPSNEELKFES 593



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 104/248 (41%), Gaps = 28/248 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   Q + Q K         +  + C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQCILQEK--------SIIQITC 384

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT--CVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG V      +PT   V  L     
Sbjct: 385 GDYHSLAL-----------SKGGELFAWGQNLHGQLG-VGRLFTSIPTPQLVEHLSGVPL 432

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G+  ++ L+  G +Y+ G    GQLG           +   L  + V+ ++ G  
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGS 492

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-- 604
           H A+LT  G V+T+G    GQLG   +Q    P  V  L   +V  V CG   T A    
Sbjct: 493 HTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSD 552

Query: 605 LHKSISVG 612
           L K  S G
Sbjct: 553 LGKVFSFG 560


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 18/348 (5%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK--LVECLSGIN 315
           SAV  D Q +  G     L+  +G V   G+G  GRLG   + + S PK  L +      
Sbjct: 424 SAVFTDCQQVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKK 483

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           + S    +  + ALT +GE+Y+WG  ++G   +G     +  +P+ +   L G  V  V+
Sbjct: 484 ISSSKGSDGHSLALTTTGEVYSWGDGDYGK--LGHGTHSTQKIPKLVKGPLVGKVVKCVS 541

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            G  H+A V+  G+L+T+GDG FG LGH    + + P +V+S+    V  VACG  HT A
Sbjct: 542 AGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIE--SVGLVACGGSHTLA 599

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
           +          +  G  ++++G  + G+LGH D  R+L P  +  L      + +CG   
Sbjct: 600 V----------SQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQS 649

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           ++ +T  G++Y  G       G+ +       +VE  L+ + +  I+ G  HV  LT   
Sbjct: 650 SLAVTSSGQLYAWGCGAILGCGSAEYTALRPRLVE-DLQSKRMVDIACGDSHVIALTHES 708

Query: 556 SVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
            VY WG NA GQ G G +Q   T P  V  L    V  V  G+S + A
Sbjct: 709 EVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVA 756



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 168/359 (46%), Gaps = 23/359 (6%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           N S    +A L    GEV+ WG     +L       ++ PK     +  + Q V  G+F 
Sbjct: 382 NNSTSHSNANLSGSCGEVYVWGSNCTHQLAEGGQEKITTPKYSAVFT--DCQQVEAGQFC 439

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK-LFDTLDGVRVSKVACGEWHTAIV 384
           T  +   G +   G  ++G   +G+  + S  +P+K LFD     ++S     + H+  +
Sbjct: 440 TFLIYSDGTVGACGKGSYGRLGLGDSNNCS--VPKKPLFDKKYVKKISSSKGSDGHSLAL 497

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDR 443
           +T+G+++++GDG +G LGHG       PK V+  L G  VK V+ G  H+AA+ +     
Sbjct: 498 TTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTE----- 552

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G+L+TWGD + GRLGH     K  PT V  +     V  +CG   T+ ++  G
Sbjct: 553 ------DGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV--ACGGSHTLAVSQDG 604

Query: 504 K-VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           K +++ G   +G+LG+     +    V   L   +++ ++ GS     +TS G +Y WG 
Sbjct: 605 KTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGC 664

Query: 563 NANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
            A   LG G ++     P  VE L+ +++  + CG S   A+     +     ++  QC
Sbjct: 665 GA--ILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQC 721



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 30/289 (10%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LSGINVQSVSCGEFQTCALTK 331
           H+  +T  GEV+ WG+G  G+LGH  +     PKLV+  L G  V+ VS G   + A+T+
Sbjct: 493 HSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTE 552

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-L 390
            GE+YTWG    G   +G   + S   P K+  +++ V +  VACG  HT  VS  G+ +
Sbjct: 553 DGELYTWGDGEFGR--LGHDYTSSKNFPTKV-QSIESVGL--VACGGSHTLAVSQDGKTI 607

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +++G G  G LGHG+     +PK +E+L GL ++ VACG   + A+              
Sbjct: 608 WSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTS-----------S 656

Query: 451 GKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           G+L+ WG      LG    E   L P  V  L     V  +CG    + LT   +VY  G
Sbjct: 657 GQLYAWGCG--AILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWG 714

Query: 510 SAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
           +   GQ G     +P  + + +  ++G      V  +S+G+ H    T+
Sbjct: 715 NNAMGQCGQGHAQSPITRPKRVIGLDGV----SVHQVSAGTSHSVAWTA 759



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 36/289 (12%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDV-QNISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K      +PKL++  ++  V + +S G +H+A VT
Sbjct: 502 EVYSWGDG----DYGKLGHGTHSTQK------IPKLVKGPLVGKVVKCVSAGYRHSAAVT 551

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WG+G+ GRLGH      + P  V+ +  + +  V+CG   T A+++ G+ I++
Sbjct: 552 EDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL--VACGGSHTLAVSQDGKTIWS 609

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G   +G    G+   +   L  K+ + L+G+ + KVACG   +  V++SGQL+ +G G 
Sbjct: 610 FGGGENGKLGHGDTNRQ---LKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGA 666

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             +LG G+ +  + +P+ VE L+  ++  +ACG  H  A+               +++ W
Sbjct: 667 --ILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTH-----------ESEVYAW 713

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFV---QASCGRMLTVGLTGL 502
           G+   G+ G    +  +  T   R++  D V   Q S G   +V  T L
Sbjct: 714 GNNAMGQCGQGHAQSPI--TRPKRVIGLDGVSVHQVSAGTSHSVAWTAL 760


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 165/356 (46%), Gaps = 37/356 (10%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECL--SGINVQSVSCGE 323
           I+ G  H A VT   E++ WG+   GR   K N+  +C P  +E L   GI V SV+CGE
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGGR---KDNVQNTCLPMRMENLHNQGIQVVSVACGE 506

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           F T AL + G +Y+WG N +G   VG+ R+R  + P  L   +   ++  V CG +HT  
Sbjct: 507 FHTIALCEEG-VYSWGSNEYGQLGVGDTRTR--YRP-VLITHISSKQIVSVVCGAYHTLA 562

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +++  +++++G G  G LG  +++N   PK+++ L   KV   A G  H+A +       
Sbjct: 563 ITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTS----- 617

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                    ++T+G    G+LG     ++++P  V  L        SCG   T+ ++   
Sbjct: 618 ------QRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQ 671

Query: 504 KVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEF------------VKGISSGSYH 547
            ++  G   H      KA+     R +      L   F            +  I  G++H
Sbjct: 672 TIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWH 731

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             +LTS   VYTWG N  GQLG  +  ++  P  V+AL  R +  V  G+  + A 
Sbjct: 732 YIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAF 787



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 11/315 (3%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + V +++ G  H   + +EG V+ WG  + G+LG         P L+  +S   + SV C
Sbjct: 497 IQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVC 555

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G + T A+T   ++Y+WG   HG   +G +   +   P+++ D LD  +V + A G  H+
Sbjct: 556 GAYHTLAITSDYKVYSWGWGVHGQ--LGLKSVENQLTPKQI-DLLDSHKVIQAAAGYAHS 612

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A++++   ++T+G   +G LG G+      P+ V+SL    +  ++CGP+ T AI +   
Sbjct: 613 AVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQT 672

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHV------DGERKLLPTCVTRLVDFDFVQASCGRML 495
             C       + +    A+  + G        D   +  P  +   +     Q  CG   
Sbjct: 673 IFCWGRNYH-QFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWH 731

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
            + LT + +VYT G    GQLG+    D+S   +   L    + G++ G+       +  
Sbjct: 732 YIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADD 791

Query: 556 SVYTWGKNANGQLGL 570
           ++  WG+N  G++G+
Sbjct: 792 NIMAWGRNDEGKIGI 806



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 30/268 (11%)

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACG 429
           +++ACG  H A V+ + +L+T+G    G     N+QN   P  +E+L  +G++V SVACG
Sbjct: 448 ARIACGRNHIAFVTNNKELYTWGKECGG--RKDNVQNTCLPMRMENLHNQGIQVVSVACG 505

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
            +HT A+       C+       +++WG  + G+LG  D   +  P  +T +     V  
Sbjct: 506 EFHTIAL-------CEEG-----VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSV 553

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
            CG   T+ +T   KVY+ G  VHGQLG    +++        L    V   ++G  H A
Sbjct: 554 VCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSA 613

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           VLTS   VYT+G +  GQLG+G   ++  P  V++L    +  + CG   T AI   ++I
Sbjct: 614 VLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTI 673

Query: 610 SVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
                         F + R  H  Y C 
Sbjct: 674 --------------FCWGRNYHQFYICA 687



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 36/259 (13%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG GV  G +G          K+  + L PK ++      V   + G  H+A++T +
Sbjct: 569 VYSWGWGV-HGQLGL---------KSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQ 618

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
             V+ +G    G+LG   +     P+LV+ L+  ++  +SCG F+T A+++   I+ WG 
Sbjct: 619 RYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIFCWGR 678

Query: 341 NNH-------------GADLVGERRSRSH-WLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
           N H             G  +    +  +H + P  L   L    ++++ CG WH  I+++
Sbjct: 679 NYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQH-PITQIFCGNWHYIILTS 737

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
             Q++T+G    G LGH N  + S P+ V++L    +  VA G   + A           
Sbjct: 738 VNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAF---------- 787

Query: 447 NAIGGKLFTWGDADKGRLG 465
                 +  WG  D+G++G
Sbjct: 788 -DADDNIMAWGRNDEGKIG 805



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 127/318 (39%), Gaps = 47/318 (14%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+       + ++  GA H   +T + +V+ WG G  G+LG K   +   PK ++ L 
Sbjct: 539 PVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLD 598

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW---LPRKLFDTLDGV 369
              V   + G   +  LT    +YT+     GADL G+    SH+   +P +L D+L   
Sbjct: 599 SHKVIQAAAGYAHSAVLTSQRYVYTF-----GADLYGQLGIGSHYKQVIP-QLVDSLTLD 652

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYG-------------DGTFGVLGHGNLQNVSQ---PK 413
            +  ++CG + T  +S    +F +G                +G     N ++++    P+
Sbjct: 653 SIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPE 712

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            ++      +  + CG WH   +  +            +++TWG  D G+LGH +   + 
Sbjct: 713 TLQFQLQHPITQIFCGNWHYIILTSV-----------NQVYTWGYNDCGQLGHYNKIDQS 761

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT--------MGSAVHGQLGNPKAKDRS 525
            P  V  L+    +  + G   +V       +          +G    G LGN  +  +S
Sbjct: 762 APRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSSSARQS 821

Query: 526 ITVVEGKLKEEFVKGISS 543
           I  V   L    V G+ S
Sbjct: 822 IYCV---LAPTLVHGLPS 836


>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
          Length = 1128

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 180/395 (45%), Gaps = 40/395 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV----SCPKL 307
           LPK L   V+  +Q +S G+ H + ++K+G VF +G   DG+LG  VN       S P L
Sbjct: 34  LPKSLSFEVL--IQQVSCGSAHTSFISKQGYVFSFGCNSDGQLG--VNDPAIKFSSAPLL 89

Query: 308 VECLSGI--NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           +  L  +  N   +SCG F T  LT  G++Y WG N  G        ++  + P KL   
Sbjct: 90  ISDLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGRNLQGQCGRSINYNQFMFAPHKLHTD 149

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVK 424
                  +V CG+ HTA+VS++G+L+T+GD + G LG G   +N      + +    +  
Sbjct: 150 SANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEGQLGIGVEFKNTVDRAALVTGISEETI 209

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            V+CG  HT  + +            G +F  G   +  L     ++   P  + + +D 
Sbjct: 210 QVSCGYKHTLVLTN-----------HGTVFGMGTNKRYELASGTLQKSSQPIRI-QTIDM 257

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
             V+       +V +T   ++   GS   G   +P+     I + + +    FV    S 
Sbjct: 258 FAVEKIIAGGFSVAITSQNELLVWGSGDFGVFQSPQK----IFMEDVR----FVDVSLSK 309

Query: 545 SYHV--AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           SY    A +   G VYTWG+N  GQLG GD + R+ PT +  LR ++V  +V G S   A
Sbjct: 310 SYDSFGAAIDDQGFVYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVRQLVAGGSFIVA 369

Query: 603 ICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
             L K I  G     S+ ++    +  K +  NCG
Sbjct: 370 --LGKDIPEG-----SKQKLQKKPKESKEHEQNCG 397



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 452 KLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFV--QASCGRMLTVGLTGLGKVYTM 508
           + F+WG+ + G+LGH  +G  +     + + + F+ +  Q SCG   T  ++  G V++ 
Sbjct: 7   EFFSWGNDEMGQLGHGQEGPDRKKIFNLPKSLSFEVLIQQVSCGSAHTSFISKQGYVFSF 66

Query: 509 GSAVHGQLG--NPKAKDRSITVVEGK---LKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           G    GQLG  +P  K  S  ++      L+   V+ IS G +H AVLTS G VY WG+N
Sbjct: 67  GCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQ-ISCGGFHTAVLTSVGDVYIWGRN 125

Query: 564 ANGQLG 569
             GQ G
Sbjct: 126 LQGQCG 131


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 171/365 (46%), Gaps = 41/365 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V ++  G KH   +  +G V+  G    G+LGH+       P+ V  L    + +VS GE
Sbjct: 36  VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHE--KPRKKPEHVVALDAQIIVAVSGGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T AL   G+I++WG  + G  L          +PR +   L  V++++VACG  H+  
Sbjct: 94  SHTLALNDKGQIFSWGLGSDG-QLGLNNFEECVRVPRNI-KCLSDVQIAQVACGYRHSHA 151

Query: 384 VSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +S  GQ+F++G   FG LG   HG+  ++S P+ ++SL+G+    ++ G  H+ AI    
Sbjct: 152 LSKGGQVFSWGQNQFGQLGLGMHGS--SISTPQIIQSLQGIPFAQLSAGGAHSFAI---- 205

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                   + G +F WG    G+LG  D   +  P  +  L     +  SCG   T  LT
Sbjct: 206 -------TLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALT 258

Query: 501 GLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT-SGG 555
             G V+T G+  +GQLG    N +   R +  + G +    V  IS G  H    T S G
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNI----VTQISCGRQHTLAFTPSSG 314

Query: 556 SVYTWGKNANGQLGLGDSQERETPT-----FVEALRDRQVESVVCGSSITAAICLHKSIS 610
            +Y++G   NGQLG   +  R++P      FV +    + ES  C        C+H+  +
Sbjct: 315 KMYSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIESESEQC-------FCIHRIYA 367

Query: 611 VGDQS 615
            GDQS
Sbjct: 368 GGDQS 372



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 137/273 (50%), Gaps = 18/273 (6%)

Query: 257 ESAVMLDVQNI---SLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLS 312
           E  V LD Q I   S G  H   +  +G++F WG G DG+LG +     V  P+ ++CLS
Sbjct: 76  EHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLS 135

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            + +  V+CG   + AL+K G++++WG N  G   +G   S       ++  +L G+  +
Sbjct: 136 DVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFA 193

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ G  H+  ++ SG +F +G   FG LG  +  +   P  ++SLR  +V  V+CG  H
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDH 253

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TAA+              G +FT+G    G+LGH     ++ P  V  L+     Q SCG
Sbjct: 254 TAALTK-----------EGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCG 302

Query: 493 RMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDR 524
           R  T+  T   GK+Y+ G   +GQLG     +R
Sbjct: 303 RQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNR 335



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  E   G  V  V CG   T  L   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G  + R    P  +   LD   +  V+ GE HT  ++  GQ+F++G G+ G 
Sbjct: 61  NDLGQ--LGHEKPRKK--PEHVV-ALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  N +  V  P+ ++ L  +++  VACG  H+ A+           + GG++F+WG  
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHAL-----------SKGGQVFSWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG  + G     P  +  L    F Q S G   +  +T  G V+  G    GQLG 
Sbjct: 165 QFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               DR    +   L+ + V  +S G  H A LT  G V+T+G    GQLG   +     
Sbjct: 225 NDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEIN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L    V  + CG   T A 
Sbjct: 285 PRKVFELMGNIVTQISCGRQHTLAF 309



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +  N  +    +P+ ++    + +  ++ G +H+  ++K G+VF WG+ + G+
Sbjct: 109 GLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQ 168

Query: 294 LGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  ++   +S P++++ L GI    +S G   + A+T SG ++ WG N  G   +G   
Sbjct: 169 LGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQ--LGLND 226

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           +   W P  L  +L   RV  V+CGE HTA ++  G +FT+G G +G LGH +  +   P
Sbjct: 227 TNDRWFP-ALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           ++V  L G  V  ++CG  HT A               GK++++G    G+LG
Sbjct: 286 RKVFELMGNIVTQISCGRQHTLAF----------TPSSGKMYSFGLGGNGQLG 328



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 13/197 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+   G  +G  + GS            P++++S   +    +S G  H+  +T  
Sbjct: 158 VFSWGQNQFG-QLGLGMHGSSIST--------PQIIQSLQGIPFAQLSAGGAHSFAITLS 208

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G VF WG  K G+LG     D   P L++ L    V  VSCGE  T ALTK G ++T+G 
Sbjct: 209 GAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGA 268

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFG 399
             +G   +G   +     PRK+F+ +  + V++++CG  HT A   +SG+++++G G  G
Sbjct: 269 GGYGQ--LGHNSTNHEINPRKVFELMGNI-VTQISCGRQHTLAFTPSSGKMYSFGLGGNG 325

Query: 400 VLGHGNLQNVSQPKEVE 416
            LG  +  N   P  V+
Sbjct: 326 QLGTRSTCNRKSPAPVK 342


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 182/384 (47%), Gaps = 54/384 (14%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P +++  + L VQ +  G +HAA++T  GE+F WG G  GRLGH     +  P+ +E L 
Sbjct: 262 PVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALE 321

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--R 370
           GI    V+CG   T A+T SGE+YTWG   +G   +G+   R    P +    ++G+  +
Sbjct: 322 GIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRH--TPSR----VEGLHSK 375

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL---RGLKVKSVA 427
           V +V  G  H+ +++  G ++ +G   +   GHG+ ++V  P+ + +     G  V+ ++
Sbjct: 376 VKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGDHEDVLDPRLIPTFSGGSGALVRQIS 433

Query: 428 CGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG---------HVDGERKLL-P 475
            GP  +HT A+       C+     G+++ WG     +LG         +++G   L  P
Sbjct: 434 VGPGGYHTMALT------CQ-----GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSP 482

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL-------------GNPKAK 522
             V  LV  + V+   G   +  LT  G++Y  G    GQL             G+P   
Sbjct: 483 QLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQA 542

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D  +     +L+   +K I+ G  H   +   G V+++G    GQLG   +   + P  V
Sbjct: 543 DFCLI---DRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLV 599

Query: 583 EALRD--RQVESVVCGSSITAAIC 604
           +AL+   R++  V CG++ T  + 
Sbjct: 600 QALKSTRREIMHVACGNNCTLVLA 623



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 453 LFTWGDADKGRLGHV----DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           +F  G  D G    V    +G   + P  V  L+     Q  CG      LT  G+++T 
Sbjct: 236 VFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTW 295

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI-----SSGSYHVAVLTSGGSVYTWGKN 563
           G    G+LG+   +      +E   + E ++GI     + G  + A +T+ G +YTWG  
Sbjct: 296 GRGGFGRLGHGNREG-----LESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAG 350

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
            NG+LGLGD  +R TP+ VE L  + V+ V  GS
Sbjct: 351 ENGRLGLGDVADRHTPSRVEGLHSK-VKEVYAGS 383



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           L++    L ++ I+ G +H+  V + GEV+ +G G+ G+LGH+       P+LV+ L   
Sbjct: 546 LIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKST 605

Query: 315 --NVQSVSCGEFQTCALTKSGEI 335
              +  V+CG    C L  +G +
Sbjct: 606 RREIMHVACG--NNCTLVLAGGV 626


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 176/372 (47%), Gaps = 42/372 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L +++   D+  ++ G +  A++T  GEV+  G   +G+ G    +D + P++V  L+
Sbjct: 35  PTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIG-EIDETVPEMVPSLT 93

Query: 313 GINVQSVSC-------------GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
            + ++  S              G      +T+ GE+ T G NN G    GE   + + LP
Sbjct: 94  KVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEV-GKGYSLP 152

Query: 360 RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
           R +     G RV+KVAC   HT +V+   + +T+G   +G LGHG+  + S P  +   +
Sbjct: 153 RPV-AGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQ 211

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT--- 476
           GL V SVACG +HT   V             G L+++G  D G+LG   GE +  P    
Sbjct: 212 GLGVLSVACGVYHTVVSV-----------ASGGLYSFGKNDHGQLGLEGGESRFTPVQHR 260

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
             T +V+    Q +CG   TV L+  G+V   G   +GQLG      R  T   G++ + 
Sbjct: 261 ACTSVVE----QLACGYYHTVALSRAGEVVAFGRNDYGQLG---LGHRESTWQGGQVPDL 313

Query: 537 F---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
               +  ++ GSYH   L   G VY +G+N +GQLG G  ++   P FVE L    V  V
Sbjct: 314 AGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQV 373

Query: 594 VCGSSITAAICL 605
             G   T  +CL
Sbjct: 374 AAGFYHT--LCL 383



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 36/364 (9%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           +E E++ +G+   G LG    ++   P L +   G ++  V+ G   T  LT +GE+Y+ 
Sbjct: 9   QERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSC 68

Query: 339 GHNNHGADLVGE-RRSRSHWLPRKLFDTL------DGVRVSKVACGEW--HTAIVSTSGQ 389
           G+N+ G   +GE   +    +P     TL         RVS V  G    H  +V+  G+
Sbjct: 69  GYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGE 128

Query: 390 LFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           L T G    G LGHG + +  S P+ V    G +V  VAC   HT  + D   DR     
Sbjct: 129 LQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDD--DR----- 181

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
                +T+G    G+LGH D   +  P  +        +  +CG   TV     G +Y+ 
Sbjct: 182 ----TWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSF 237

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G   HGQLG    + R  T V+ +     V+ ++ G YH   L+  G V  +G+N  GQL
Sbjct: 238 GKNDHGQLGLEGGESR-FTPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQL 296

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRR 628
           GLG  +       V  L   ++  V CGS        + +IS+ D+        PFG  R
Sbjct: 297 GLGHRESTWQGGQVPDLAGLRIIQVACGS--------YHTISLDDEGRV----YPFG--R 342

Query: 629 KKHN 632
             H 
Sbjct: 343 NNHG 346



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 29/320 (9%)

Query: 247 QVDALLPKLLESAVMLDVQNISL-------------GAKHAALVTKEGEVFCWGEGKDGR 293
           ++D  +P+++ S   + ++  S              G++H  +VT+EGE+   G    G+
Sbjct: 80  EIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQ 139

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LGH +V    S P+ V   +G  V  V+C    T  +T     +T+G N +G    G+  
Sbjct: 140 LGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHS 199

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           SRS       F    G+ V  VACG +HT +   SG L+++G    G LG    ++   P
Sbjct: 200 SRSAPAALACFQ---GLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTP 256

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
            +  +   + V+ +ACG +HT A+           +  G++  +G  D G+LG    E  
Sbjct: 257 VQHRACTSV-VEQLACGYYHTVAL-----------SRAGEVVAFGRNDYGQLGLGHREST 304

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
                V  L     +Q +CG   T+ L   G+VY  G   HGQLG    +D         
Sbjct: 305 WQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEG 364

Query: 533 LKEEFVKGISSGSYHVAVLT 552
           L + FV  +++G YH   LT
Sbjct: 365 LSQSFVCQVAAGFYHTLCLT 384



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 30/296 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP+ +       V  ++    H  +VT +   + +G    G+LGH  +   S P  + C 
Sbjct: 151 LPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACF 210

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            G+ V SV+CG + T     SG +Y++G N+HG   +G     S + P +         V
Sbjct: 211 QGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQ--LGLEGGESRFTPVQHRACTS--VV 266

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            ++ACG +HT  +S +G++  +G   +G LG G+ ++  Q  +V  L GL++  VACG +
Sbjct: 267 EQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSY 326

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HT ++ D            G+++ +G  + G+LG    E    P  V  L      Q + 
Sbjct: 327 HTISLDDE-----------GRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAA 375

Query: 492 GRMLTVGLT--------GLGKVY------TMGSAVHGQLGNPKAKDRSITVVEGKL 533
           G   T+ LT        G G  +      ++ S ++  L NP   D + T VEGK+
Sbjct: 376 GFYHTLCLTGPPLERKAGHGSAFVVRDSKSLSSDLYRLLNNPSQSDVTFT-VEGKV 430


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 165/360 (45%), Gaps = 38/360 (10%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           ++ WG  K+ RLG +   D SC P+L++      +Q V+CG   T  L + G ++++G+N
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
            +G    G +        R +    +  ++  VACG +H+A +  +G +FT+G G  G L
Sbjct: 72  QYGQLGNGTKVDSPLDASRDISSLSN--KLIAVACGRYHSAALDVNGTVFTWGGGKNGRL 129

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           GH + Q  + P  +  L   +   + CG   TAAI D              L+TWG  + 
Sbjct: 130 GHNDEQTRTIPCRITHLP--RAHKIFCGYHITAAITD------------DGLYTWGWGEH 175

Query: 462 GRLGHVDGERKLLPTCVTRLVDFD-----FVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G+LG    E    P    + V FD       Q +CG    +  T  G VYT GS   GQL
Sbjct: 176 GQLGQGSLEDSYGP----KKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQL 231

Query: 517 GNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G  +  +  S  V+   L    V  +++G  H A +T+ GS++TWG  A GQ G GD  +
Sbjct: 232 GIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYND 291

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-----------GDQSSCSQCRMPF 624
            + P  VE+L    +  V CG + T A+     I V           G +SSC   R  F
Sbjct: 292 CDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLF 351



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 136/277 (49%), Gaps = 18/277 (6%)

Query: 244 NKTQVDALLPKLLE-SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           N T+VD+ L    + S++   +  ++ G  H+A +   G VF WG GK+GRLGH      
Sbjct: 78  NGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTR 137

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           + P  +  L       + CG   T A+T  G +YTWG   HG   +G+      + P+K+
Sbjct: 138 TIPCRITHLP--RAHKIFCGYHITAAITDDG-LYTWGWGEHGQ--LGQGSLEDSYGPKKV 192

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGL 421
                 + +S++ACG+ H  + + SG ++T+G   FG LG G    + S P  + SL G+
Sbjct: 193 IFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGM 252

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            V  VA G  H+AA+ +            G LFTWG   +G+ GH D     +P  V  L
Sbjct: 253 MVTFVAAGDRHSAAVTNT-----------GSLFTWGCGAEGQCGHGDYNDCDMPFLVESL 301

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           V    ++  CG   TV L+    +Y  G+  +GQLG+
Sbjct: 302 VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGD 338



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 133/300 (44%), Gaps = 34/300 (11%)

Query: 199 SHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLES 258
           S++L+    G       D+   V  WG         G  +G +  N  Q   +  ++   
Sbjct: 96  SNKLIAVACGRYHSAALDVNGTVFTWG---------GGKNGRLGHNDEQTRTIPCRITH- 145

Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK-LVECLSGINVQ 317
             +     I  G    A +T +G ++ WG G+ G+LG     D   PK ++   + + + 
Sbjct: 146 --LPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAIS 202

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            ++CG+      T+SG++YTWG N  G   +G  R    +    L  +L G+ V+ VA G
Sbjct: 203 QLACGDRHCLVRTESGDVYTWGSNEFGQ--LGIGRYNEIYSSPVLLTSLAGMMVTFVAAG 260

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           + H+A V+ +G LFT+G G  G  GHG+  +   P  VESL G+ +  V CG   T A+ 
Sbjct: 261 DRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALS 320

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF---VQASCGRM 494
                  K N I    + +G+   G+LG  DG +     C  R + F     +  +CG  
Sbjct: 321 -------KDNDI----YVFGNNSYGQLG--DGSKS--SCCTPRKLFFSIPGTIDITCGHF 365



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 4/134 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P LL S   + V  ++ G +H+A VT  G +F WG G +G+ GH    D   P LVE L 
Sbjct: 243 PVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLV 302

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           G+ +  V CG   T AL+K  +IY +G+N++G   +G+    S   PRKLF ++ G    
Sbjct: 303 GVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQ--LGDGSKSSCCTPRKLFFSIPG--TI 358

Query: 373 KVACGEWHTAIVST 386
            + CG +H  + +T
Sbjct: 359 DITCGHFHCTLWTT 372


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 159/324 (49%), Gaps = 17/324 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+ ++ G  H+  + ++GEV+  G    G+LGH+   + S P+ +  L+G ++  V+CG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--SEGSKPEPIGALAGQHIVHVACG 92

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  + AL+  G++++WG  + G   +G           +L   L+   + +++CG WH  
Sbjct: 93  ESHSVALSDQGQVFSWGAGSDGQ--LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCL 150

Query: 383 IVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  GQ FT+G  ++G LG G    + + P+ V+SL G+ +  VA G  H+ A+     
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 205

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 ++ G +F WG    G+LG  D   +  P  V  L     V  SCG   T  LT 
Sbjct: 206 ------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK 259

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
            G V+T G+   GQLG+    D        +L    V  I+ G +H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 561 GKNANGQLGLGDSQERETPTFVEA 584
           G    GQLG G +   + P+ V+ 
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 146/325 (44%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCP--KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+ V  P  ++   +   NV+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G     S   P      L G  +  VACGE H+  +S  GQ+F++G G+ G 
Sbjct: 61  NTKGQ--LGHESEGSKPEP---IGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG   +++ V+ P+ ++ L    +  ++CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH-----------CLALAADGQFFTWGQN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVSQIACGRHHTLAF 309



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 142/289 (49%), Gaps = 26/289 (8%)

Query: 338 WGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           WG+++ G   +G        +P  +++  +    V +VACG  H+  +   G+++T G  
Sbjct: 4   WGYSSFGQPGIGSNLQVI--IPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
           T G LGH +    S+P+ + +L G  +  VACG  H+ A+ D            G++F+W
Sbjct: 62  TKGQLGHES--EGSKPEPIGALAGQHIVHVACGESHSVALSD-----------QGQVFSW 108

Query: 457 GDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G    G+LG    E  + +P  + +L     +Q SCG    + L   G+ +T G   +GQ
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168

Query: 516 LGNPK-----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           LG  K     A  + +  ++G    +    +++G  H   L+  G+V+ WGKN++GQLGL
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQ----VAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            D ++RE+P  V+ LR ++V  + CG   TA +     +      SC Q
Sbjct: 225 SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     +    +P+L++      +  IS G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG N+ G   + + R
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL   L   +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKL---LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFV----------PSSGMIYAFGCGTRGQLG 328


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 17/310 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK L+      V   +LGA H   +TK+G+V+  G    G+LGH  +     P+LV  L 
Sbjct: 25  PKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGH--DQPRKRPQLVSGLD 82

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             ++ +V+CGE  + AL++ GE+++WG +N+G   +G +   +  +  KL  +L   +V 
Sbjct: 83  AYSIINVACGEMHSLALSRWGEVFSWGSDNYGQ--LGHQLGGTLQIVPKLIKSLAKYQVV 140

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGLKVKSVACGPW 431
           ++A G+ H+  ++ +G++F +G   FG LG G +    S P  V SL G+    +ACG  
Sbjct: 141 QIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGAN 200

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HT A+        KS A+    F WG    G+LG  D   K  PT +  L +      SC
Sbjct: 201 HTFAV-------SKSGAV----FGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISC 249

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAV 550
           G   +  LT  G V++ G+ ++GQLG+    +  +     +L    +  IS G  H +A 
Sbjct: 250 GDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAF 309

Query: 551 LTSGGSVYTW 560
           + S G VY++
Sbjct: 310 VPSRGRVYSY 319



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 135/274 (49%), Gaps = 18/274 (6%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           ++ WG   HG   +G       + P+ L D  +   V K A G  HT  ++  G++++ G
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKAL-DWFEAKSVMKAALGANHTLFLTKDGKVYSCG 59

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
              +G LGH   Q   +P+ V  L    + +VACG  H+ A+           +  G++F
Sbjct: 60  SNDYGQLGHD--QPRKRPQLVSGLDAYSIINVACGEMHSLAL-----------SRWGEVF 106

Query: 455 TWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +WG  + G+LGH + G  +++P  +  L  +  VQ + G+  +V LT  G+++  G+   
Sbjct: 107 SWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDF 166

Query: 514 GQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           GQLG       + + T V       F   I+ G+ H   ++  G+V+ WGKN NGQLGL 
Sbjct: 167 GQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSKSGAVFGWGKNINGQLGLN 225

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           D+  ++ PT +  LR+ +V  + CG   +  + L
Sbjct: 226 DTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTL 259



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 140/323 (43%), Gaps = 30/323 (9%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +F WG    G LG        V  PK ++     +V   + G   T  LTK G++Y+ G 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 341 NNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N++G           H  PRK   L   LD   +  VACGE H+  +S  G++F++G   
Sbjct: 61  NDYG--------QLGHDQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDN 112

Query: 398 FGVLGH---GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +G LGH   G LQ V  PK ++SL   +V  +A G  H+ A+ +            G++F
Sbjct: 113 YGQLGHQLGGTLQIV--PKLIKSLAKYQVVQIAAGQRHSVALTN-----------AGEIF 159

Query: 455 TWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            WG  D G+LG       +  PT V  L    F   +CG   T  ++  G V+  G  ++
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG      +        L+   V+ IS G      LT  G V++ G    GQLG G +
Sbjct: 220 GQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGT 279

Query: 574 QERETPTFVEALRDRQVESVVCG 596
                P  V  L    +  + CG
Sbjct: 280 SNEILPRQVLELMGSTITQISCG 302



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 111/222 (50%), Gaps = 19/222 (8%)

Query: 220 DVMIWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           +V  WG    G LG  +GG +             ++PKL++S     V  I+ G +H+  
Sbjct: 104 EVFSWGSDNYGQLGHQLGGTLQ------------IVPKLIKSLAKYQVVQIAAGQRHSVA 151

Query: 277 VTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           +T  GE+F WG    G+LG   +    S P  V  LSGI    ++CG   T A++KSG +
Sbjct: 152 LTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAV 211

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           + WG N +G   +G   + S   P +L  TL   RV  ++CG+  +  ++  G +F+ G 
Sbjct: 212 FGWGKNINGQ--LGLNDTVSKKFPTQL-RTLRNSRVRFISCGDEFSTFLTLDGGVFSCGA 268

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           G +G LGHG   N   P++V  L G  +  ++CG  H+ A V
Sbjct: 269 GMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFV 310


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 17/324 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+ ++ G  H+  + ++GEV+  G    G+LGH  + + S P+ +  L+G ++  V+CG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEGSKPEQIGALAGQHIVHVACG 92

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  + AL+  G++++WG  + G   +G           +L   L+   + +V+CG WH  
Sbjct: 93  ESHSLALSDQGQLFSWGAGSDGQ--LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCL 150

Query: 383 IVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  GQ FT+G  ++G LG G    + + P+ V+SL G+ +  VA G  H+ A+     
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 205

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 ++ G +F WG    G+LG  D   +  P  V  L     V  SCG   T  LT 
Sbjct: 206 ------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK 259

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
            G V+T G+   GQLG+    D        +L    V  I+ G +H +A + S G +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 561 GKNANGQLGLGDSQERETPTFVEA 584
           G    GQLG G +   + P+ V+ 
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 283 VFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+  +G  + + V  P++   +   NV+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGA---DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N  G    D  G +       P ++   L G  +  VACGE H+  +S  GQLF++G G+
Sbjct: 61  NTKGQLGHDCEGSK-------PEQI-GALAGQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LG   +++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTW
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH-----------CLALAADGQFFTW 161

Query: 457 GDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G    G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQ
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQ 221

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG    +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +
Sbjct: 222 LGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 281

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAI 603
              P  V  L   +V  + CG   T A 
Sbjct: 282 EVNPRRVLELMGSEVSQIACGRHHTLAF 309



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 24/288 (8%)

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG+++ G   +G         P +++  +    V +VACG  H+  +   G+++T G  T
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEP-QVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGH      S+P+++ +L G  +  VACG  H+ A+ D            G+LF+WG
Sbjct: 63  KGQLGHDC--EGSKPEQIGALAGQHIVHVACGESHSLALSD-----------QGQLFSWG 109

Query: 458 DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG    E  + +P  + +L     +Q SCG    + L   G+ +T G   +GQL
Sbjct: 110 AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQL 169

Query: 517 GNPK-----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G  K     A  + +  ++G    +    +++G  H   L+  G+V+ WGKN++GQLGL 
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQ----VAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           D ++RE+P  V+ LR ++V  + CG   TA +     +      SC Q
Sbjct: 226 DERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     +    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG N+ G   + + R
Sbjct: 169 LGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL   L   +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKL---LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFV----------PSSGMIYAFGCGTRGQLG 328


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 169/346 (48%), Gaps = 28/346 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV---NMDVSCPKLVECLSGI--NVQS 318
           +++I+ G +  A+V K+G VF  G  K G+ G+      + ++ P  V  LSGI  N+ +
Sbjct: 504 IRDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATP--VRALSGIVINMVA 561

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
            + G     A+   G +Y+WG+N+ G   +G   S+SH  PR +    +   ++  A   
Sbjct: 562 AANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSH-TPRMIDSLREKYHITTAAVSY 620

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            H+A+VS++G+L  +G    G LG  + Q+   P+ V+SL    +  VACG +HT AI  
Sbjct: 621 HHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITS 680

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFD--FVQASCGRML 495
                      GG+++++G  D G+LG        +PT V T L + D   V  SCG   
Sbjct: 681 -----------GGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYH 729

Query: 496 TVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           TV ++  GK+ T G   +GQLG   K    S   V   L  + +K  S G YH  +L S 
Sbjct: 730 TVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSK-IKTASCGCYHTLILMSN 788

Query: 555 GSVYTWGKNANGQLGLGD----SQERETPTFVEALRDRQVESVVCG 596
           G V  +G+N  GQLG G     S +   P    +L + +V  +  G
Sbjct: 789 GRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAG 834



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 25/305 (8%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECL-SGIN 315
           S +++++   + G +H   V  +G V+ WG    G+LG    +  S  P++++ L    +
Sbjct: 553 SGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYH 612

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           + + +     +  ++ +GE+  +G N+ G   +G   ++    P +L D+L    +++VA
Sbjct: 613 ITTAAVSYHHSAVVSSNGELLMFGMNDCGQ--LGLDHTQHQHTP-QLVDSLSSQVITEVA 669

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG---LKVKSVACGPWH 432
           CG +HT  +++ G+++++G   +G LG G+ +N+  P  V++  G    K+ +V+CG +H
Sbjct: 670 CGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYH 729

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T  I +            GKL TWG  D G+LG    + K     V   +      ASCG
Sbjct: 730 TVTISE-----------KGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCG 778

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGN-----PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
              T+ L   G+V   G    GQLG      P A D  + V    L  + V  I++G Y 
Sbjct: 779 CYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSA-DLPLPVPSNSLANDEVVRIAAGFYS 837

Query: 548 VAVLT 552
             +LT
Sbjct: 838 SYILT 842



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 23/246 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +   ++   H+A+V+  GE+  +G    G+LG         P+LV+ LS   +  V+CG 
Sbjct: 613 ITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGL 672

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL--DGVRVSKVACGEWHT 381
           + T A+T  GE+Y++G N++G   +G   +R+  +P  +  +L     ++  V+CG +HT
Sbjct: 673 YHTIAITSGGEVYSFGKNDYGQ--LGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHT 730

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S  G+L T+G   +G LG G+  + +  + V      K+K+ +CG +HT  ++    
Sbjct: 731 VTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILM---- 786

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKL------LPTCVTRLVDFDFVQASCGRML 495
               SN   G++  +G  +KG+LG   G R L      LP     L + + V+ + G   
Sbjct: 787 ----SN---GRVMVFGRNNKGQLGA--GSRTLPSADLPLPVPSNSLANDEVVRIAAGFYS 837

Query: 496 TVGLTG 501
           +  LTG
Sbjct: 838 SYILTG 843



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 25/334 (7%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           E+F  G+   G L        S  + V   S   ++ ++ G      + K G ++T G N
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
             G    G        +       L G+ ++ VA   G  H   V++ G ++++G    G
Sbjct: 530 KSGQ--CGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRG 587

Query: 400 VLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G+  + S  P+ ++SLR     + A   +H +A+V        SN   G+L  +G 
Sbjct: 588 QLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVV-------SSN---GELLMFGM 637

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            D G+LG    + +  P  V  L      + +CG   T+ +T  G+VY+ G   +GQLG 
Sbjct: 638 NDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGL 697

Query: 519 PKAKDRSI-TVVEGKLKE--EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
             A++  + T+V+  L E  E +  +S G YH   ++  G + TWG+N  GQLG+G    
Sbjct: 698 GHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDH 757

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           + +  +V      ++++  CG       C H  I
Sbjct: 758 KNSAQYVPLPLSSKIKTASCG-------CYHTLI 784



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 34/296 (11%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +S   F  C      E+++ G NN+G   +G   S S  L    F +   +R   +A G 
Sbjct: 461 LSVASFDDC------ELFSCGQNNYGELCLGHCNSTSK-LEHVPFFSAKAIR--DIAGGN 511

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVAC--GPWHTAA 435
              A+V   G +FT G    G  G+G  +  V     V +L G+ +  VA   G  H  A
Sbjct: 512 EVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLA 571

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-----FDFVQAS 490
           +           A  G +++WG  D+G+LG      K   +   R++D     +    A+
Sbjct: 572 V-----------ASDGAVYSWGYNDRGQLGLGSTISK---SHTPRMIDSLREKYHITTAA 617

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
                +  ++  G++   G    GQLG    + +    +   L  + +  ++ G YH   
Sbjct: 618 VSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIA 677

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL---RDRQVESVVCGSSITAAI 603
           +TSGG VY++GKN  GQLGLG ++  + PT V+      D ++ +V CG   T  I
Sbjct: 678 ITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTI 733


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 20/293 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G + Q++ Q   +    LE+ V   +++++ G  H   V+  G+V  WG    G+
Sbjct: 62  GANSKGQLGQDRNQYKPVQVSALETVV---IKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118

Query: 294 LGHKVNMDVSC---PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            G     D+     P++++ L+      V CG   + ALT+ G +++WG N +G   +G 
Sbjct: 119 CGLATG-DIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGT 177

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             +     P +L  +L GV + +VACG +H+  ++ SG +F +G    G LG GN +N +
Sbjct: 178 LVTNYTDRPTEL-TSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA 236

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P  + ++R   VK +ACG  HTA +              G +F +G   +G+LGH    
Sbjct: 237 YPTLLRNMRSQMVKHIACGQDHTAML-----------TADGGVFLFGQGSEGQLGHGSNY 285

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTG-LGKVYTMGSAVHGQLGNPKAK 522
            ++ P  V  L+  D  Q +CG+  T+ L G  G++Y  G  +HGQLG  +A+
Sbjct: 286 NEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEAR 338



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 156/327 (47%), Gaps = 23/327 (7%)

Query: 284 FCWGEGKDGRLGHKVN---MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           FCWG   +G+LG  +          K V  LSG  VQS+SCG+  T  +   G +Y  G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G+ R++  + P ++   L+ V +  VACG+ HT  VS  GQ+  +G    G 
Sbjct: 64  NSKGQ--LGQDRNQ--YKPVQV-SALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118

Query: 401 --LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             L  G+++N  +P+ ++ L   +   V CG  H+ A+              G+LF+WGD
Sbjct: 119 CGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTR-----------DGRLFSWGD 167

Query: 459 ADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
              G+LG   +       PT +T L     V+ +CG   +  LT  G V+  G    GQL
Sbjct: 168 NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQL 227

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G    ++++   +   ++ + VK I+ G  H A+LT+ G V+ +G+ + GQLG G +   
Sbjct: 228 GLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNE 287

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    +  V CG   T  +
Sbjct: 288 VNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 25/292 (8%)

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           + WG +  G   +G    ++     K   TL G RV  ++CG+ HT IV   G L+  G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            + G LG    +N  +P +V +L  + +K VACG  HT A+ D            G++  
Sbjct: 64  NSKGQLGQD--RNQYKPVQVSALETVVIKHVACGDDHTLAVSD-----------RGQVLG 110

Query: 456 WGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           WG  D+G+ G   G  E K  P  +  L  + FV+  CG + ++ LT  G++++ G   +
Sbjct: 111 WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 170

Query: 514 GQLG------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
           GQLG      N   +   +T + G      V+ ++ G +H   LT  GSV+ WGKN  GQ
Sbjct: 171 GQLGIGTLVTNYTDRPTELTSLRGV---PLVR-VACGGFHSFALTISGSVFGWGKNDVGQ 226

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           LGLG+ + +  PT +  +R + V+ + CG   TA +     + +  Q S  Q
Sbjct: 227 LGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQ 278



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 136/271 (50%), Gaps = 20/271 (7%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC---PKLVECLS 312
           LE+ V   +++++ G  H   V+   +V  WG    G+ G     D+     P+++  L+
Sbjct: 424 LETVV---IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATG-DIENKPRPRILRHLA 479

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
                 V CG   + ALT+ G +++WG N +G   +G   +     P +L  +L GV + 
Sbjct: 480 SYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTEL-TSLRGVPLV 538

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +VACG +H+  ++ SG +F +G    G LG GN +N S P  + ++R   VK +ACG  H
Sbjct: 539 RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDH 598

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G +F +G   +G+LGH     ++ P  V  L+  D  Q +CG
Sbjct: 599 TAML-----------TADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCG 647

Query: 493 RMLTVGLTG-LGKVYTMGSAVHGQLGNPKAK 522
           +  T+ L G  G++Y  G  +HGQLG  +A+
Sbjct: 648 KHHTLVLEGSKGRLYAFGQGIHGQLGQDEAR 678



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 15/272 (5%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L  + ++ V+CG+  T A++   ++  WG N+ G   +      +   PR +   L   +
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPR-ILRHLASYQ 482

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVAC 428
             KV CG  H+  ++  G+LF++GD T+G LG G L      +P E+ SLRG+ +  VAC
Sbjct: 483 FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVAC 542

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G +H+ A+            I G +F WG  D G+LG  + E K  PT +  +       
Sbjct: 543 GGFHSFAL-----------TISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKH 591

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            +CG+  T  LT  G V+  G    GQLG+    +         L    +  ++ G +H 
Sbjct: 592 IACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHT 651

Query: 549 AVLT-SGGSVYTWGKNANGQLGLGDSQERETP 579
            VL  S G +Y +G+  +GQLG  +++    P
Sbjct: 652 LVLEGSKGRLYAFGQGIHGQLGQDEARSCSNP 683



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 15/215 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL--GHKVNMDVSCPKLVEC 310
           P++L          +  G+ H+  +T++G +F WG+   G+L  G  V      P  +  
Sbjct: 472 PRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS 531

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G+ +  V+CG F + ALT SG ++ WG N+ G   +G + ++S+     L   +    
Sbjct: 532 LRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSY---PTLLRNMRSQM 588

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +ACG+ HTA+++  G +F +G G+ G LGHG+  N   P++V  L G  +  V CG 
Sbjct: 589 VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGK 648

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            HT  +              G+L+ +G    G+LG
Sbjct: 649 HHTLVL----------EGSKGRLYAFGQGIHGQLG 673



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 155/374 (41%), Gaps = 52/374 (13%)

Query: 263 DVQNISLGAKHAALVTK--EGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC----LSGINV 316
           D+  ++ G KH  LV +  +G ++ +G+G  G+LG       S P+ V       S    
Sbjct: 300 DITQVTCG-KHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEK 358

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFD------- 364
            S S G    C       IY  GH+      + AD +  +        R  F        
Sbjct: 359 NSSSKGRVVRC-------IYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXX 411

Query: 365 -----------TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV--LGHGNLQNVSQ 411
                       L+ V +  VACG+ HT  VS   Q+  +G    G   L  G+++N  +
Sbjct: 412 XXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPR 471

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDG 469
           P+ +  L   +   V CG  H+ A+              G+LF+WGD   G+LG   +  
Sbjct: 472 PRILRHLASYQFVKVCCGSLHSMALTR-----------DGRLFSWGDNTYGQLGIGTLVT 520

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
                PT +T L     V+ +CG   +  LT  G V+  G    GQLG    +++S   +
Sbjct: 521 NYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTL 580

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
              ++ + VK I+ G  H A+LT+ G V+ +G+ + GQLG G +     P  V  L    
Sbjct: 581 LRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSD 640

Query: 590 VESVVCGSSITAAI 603
           +  V CG   T  +
Sbjct: 641 ITQVTCGKHHTLVL 654



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 136/579 (23%), Positives = 228/579 (39%), Gaps = 78/579 (13%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  L S   + +  ++ G  H+  +T  G VF WG+   G+LG     + + P L+  + 
Sbjct: 186 PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMR 245

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V+ ++CG+  T  LT  G ++ +G  + G   +G   + +   PRK+ D L G  ++
Sbjct: 246 SQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQ--LGHGSNYNEVNPRKVID-LMGSDIT 302

Query: 373 KVACGEWHTAIVSTS-GQLFTYGDGTFGVLGHGNLQNVSQPKEV-------------ESL 418
           +V CG+ HT ++  S G+L+ +G G  G LG    ++ S P+ V              S 
Sbjct: 303 QVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSS 362

Query: 419 RGLKVKSVACGPWH-----TAAIVDIMVDRCKSNAIGGKLF--TWGDADKGRLGHVDGER 471
           +G  V+ +  G  H     T A  DI + +     I  ++F                   
Sbjct: 363 KGRVVRCIYAGGHHCFSTATNAADDIQI-KLLFRDISTRIFFQLTXXXXXXXXXXXXXXX 421

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ----LGNPKAKDRSIT 527
             L T V + V       +CG   T+ ++   +V   G    GQ     G+ + K R   
Sbjct: 422 XXLETVVIKHV-------ACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRP-R 473

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD--SQERETPTFVEAL 585
           ++      +FVK +  GS H   LT  G +++WG N  GQLG+G   +   + PT + +L
Sbjct: 474 ILRHLASYQFVK-VCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSL 532

Query: 586 RDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACS 645
           R   +  V CG   + A+ +  S+    ++   Q     G   K++  Y   L    +  
Sbjct: 533 RGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQ----LGLGNKENKSYPTLLRNMRSQM 588

Query: 646 TKKII-----NASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQ---SPRNLLNLQG 697
            K I       A LT + G            L      G+L    N    +PR +++L G
Sbjct: 589 VKHIACGQDHTAMLTADGGV----------FLFGQGSEGQLGHGSNYNEVNPRKVIDLMG 638

Query: 698 SLSEEV---KEEKGALTPSRGQSFTSKQS-------------RNVERKPGECLESASSLS 741
           S   +V   K     L  S+G+ +   Q               N +R PG  +  +S+  
Sbjct: 639 SDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTAK 698

Query: 742 SGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSP 780
           +   +   V C      HC   +      P+  +    P
Sbjct: 699 NSSSKGRVVRCIYAGGHHCFSTATNAADNPELPLDFRDP 737


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 183/409 (44%), Gaps = 52/409 (12%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG------HKVNM---- 300
           L PK +  A    +  ++ G +H   +T  G+V+ +G+ +D ++       H   +    
Sbjct: 466 LRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNE 525

Query: 301 --------DVSCPKLVE------CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
                       P LVE       L    +  V+CG   + A+T +GE+YTWG    G  
Sbjct: 526 STRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRL 585

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL 406
             G+ R R+  +PRK+   L    VS  +CG  HTA+++  G +FT+G G  G LG G+ 
Sbjct: 586 GHGDMRDRA--VPRKVMSLLRESVVS-ASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDN 642

Query: 407 QNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR-- 463
           +    P  +    +G  +  V CG W+  A +D            G +FTWG   +G+  
Sbjct: 643 KWRDTPHPIVGFPQGTSISLVVCG-WNFTAALDRQ----------GSVFTWGKTGEGQCG 691

Query: 464 LGHVDGERKLLPTCVTRLVDF---DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
           LG+VD + +++P CV +L D      V  +CG   TV LT  G++Y+ G   +GQLG   
Sbjct: 692 LGYVDRD-QVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGD 750

Query: 521 AKD----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
                  R     +     + +  +  G++H    T    ++ WG N+ G  GLG +  +
Sbjct: 751 VYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANK 810

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
           + P  ++    +    V CG   T A+ ++ S+      S SQ  +P G
Sbjct: 811 DKPERIDCFSSQTELVVACGHKYTIALEVNASLYT---HSPSQTMLPTG 856



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 28/285 (9%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     + D  +P+ + S +   V + S G  H A++T +G VF +G G++GR
Sbjct: 578 GSGEDGRLGHGDMR-DRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGR 636

Query: 294 LGHKVNMDVSCPK-LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG   N     P  +V    G ++  V CG   T AL + G ++TWG    G   +G   
Sbjct: 637 LGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLG-YV 695

Query: 353 SRSHWLPR---KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN- 408
            R   +PR   KL D + G  V  VACG  HT +++ SG+L+++G G +G LG G++   
Sbjct: 696 DRDQVVPRCVDKLRD-VAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQP 754

Query: 409 ----VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR- 463
               V  P +       ++  V CG +H+ A  +  V           +F WG    G  
Sbjct: 755 LPARVQLPADALCAPD-QLARVYCGAFHSIATTEQRV-----------MFAWGLNSYGAC 802

Query: 464 -LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
            LGH   + K  P  +        +  +CG   T+ L     +YT
Sbjct: 803 GLGHTANKDK--PERIDCFSSQTELVVACGHKYTIALEVNASLYT 845


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 181/366 (49%), Gaps = 38/366 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ I+ G  H   +T+ G V+  G    G+LG       S    VE         +S G 
Sbjct: 132 LKGIACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEP-VEVRIPKEAMHISAGY 190

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             +C +T  GE+Y WG N++G   +G++ +++  LP K+ D+LDG+ + + A G  H+  
Sbjct: 191 NHSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKV-DSLDGIVIKRAALGSDHSIA 249

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-------LQNVSQ--PKEVESLRGLKVKSVACGPWHTA 434
           V+  G++F++GDG  G LGHG+       L++ S+  P+ ++ L G+KVK VA G  H+A
Sbjct: 250 VADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSA 309

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
            + +            G ++ +G+    R+   +  +   P+ ++ L+D +  + +CG  
Sbjct: 310 CVDE-----------NGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE--EVACGGY 356

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTS 553
            T  LT  G +Y+ GS  +G LGN       +   VEG   +  V  +S G  H A + S
Sbjct: 357 HTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI-S 415

Query: 554 GGSVYTWG------------KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           GG+++TWG             ++ GQLG G   +   PT ++   + +V  V CG + T 
Sbjct: 416 GGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTG 475

Query: 602 AICLHK 607
           AI  +K
Sbjct: 476 AILEYK 481



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 151/341 (44%), Gaps = 51/341 (14%)

Query: 286 WGEGKDGRLGHKVNMD-----VSCPKL-VECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           WG G  GRLG   N+D     V C     E L GI     +CG   T  LT+SG +Y  G
Sbjct: 102 WGNGDFGRLGLG-NLDSQWSPVPCSSFDREMLKGI-----ACGGAHTLFLTESGRVYATG 155

Query: 340 HNNHG-ADLVGERRSRSHWLPRKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYG 394
            NN G   +  E+R  +   P +       VR+ K    ++ G  H+ +V+  G+L+ +G
Sbjct: 156 LNNFGQLGISDEKRFSTE--PVE-------VRIPKEAMHISAGYNHSCVVTADGELYMWG 206

Query: 395 DGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
             + G LG G  + + V  P +V+SL G+ +K  A G  H+ A+ D           GG+
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD-----------GGE 255

Query: 453 LFTWGDADKGRLGH---------VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
           +F+WGD   GRLGH         +    +  P  +  L        + G + +  +   G
Sbjct: 256 VFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENG 315

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            VY  G     ++   +A   +   +   L +   + ++ G YH  VLT GG +Y+WG N
Sbjct: 316 AVYIFGERATNRVSFGEANKATTPSLISTLLD--CEEVACGGYHTCVLTKGGDLYSWGSN 373

Query: 564 ANGQLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAAI 603
            NG LG G +     P  VE       V  V CG   TAAI
Sbjct: 374 ENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI 414



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 53/325 (16%)

Query: 191 DTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           + R PK   H  ++  Y    +   D   ++ +WG            +G +   K    A
Sbjct: 176 EVRIPKEAMH--ISAGYNHSCVVTAD--GELYMWGVNS---------NGQLGLGKKSAKA 222

Query: 251 L-LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK---------VNM 300
           + LP  ++S   + ++  +LG+ H+  V   GEVF WG+G+ GRLGH           + 
Sbjct: 223 VHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKST 282

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
               P+L++ L GI V+ V+ G   +  + ++G +Y +G         GE    +   P 
Sbjct: 283 SEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKAT--TPS 340

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LR 419
            +   LD     +VACG +HT +++  G L+++G    G LG+G+      P+ VE    
Sbjct: 341 LISTLLD---CEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFS 397

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW------------GDADKGRLGHV 467
              V  V+CG  HTAAI             GG +FTW            G +  G+LGH 
Sbjct: 398 KSPVSKVSCGWKHTAAIS------------GGAIFTWGWGGSHGTFSVDGHSSGGQLGHG 445

Query: 468 DGERKLLPTCVTRLVDFDFVQASCG 492
                + PT +    +   VQ SCG
Sbjct: 446 SDVDYVKPTKIDLGENVKVVQVSCG 470



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 107/198 (54%), Gaps = 17/198 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L++    + V++++ G  H+A V + G V+ +GE    R+        + P L+  L 
Sbjct: 287 PRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPSLISTL- 345

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            ++ + V+CG + TC LTK G++Y+WG N +G  L     S SH LP ++        VS
Sbjct: 346 -LDCEEVACGGYHTCVLTKGGDLYSWGSNENGC-LGNGSTSVSH-LPERVEGPFSKSPVS 402

Query: 373 KVACGEWHTAIVSTSGQLFTYG----DGTFGV--------LGHGNLQNVSQPKEVESLRG 420
           KV+CG  HTA +S  G +FT+G     GTF V        LGHG+  +  +P +++    
Sbjct: 403 KVSCGWKHTAAIS-GGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGEN 461

Query: 421 LKVKSVACGPWHTAAIVD 438
           +KV  V+CG  HT AI++
Sbjct: 462 VKVVQVSCGFNHTGAILE 479


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 137/295 (46%), Gaps = 37/295 (12%)

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           +++ P+LV+ L  IN + VS G  Q   +  SGE+Y WG N+ G    G+RR  S  +PR
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDAS--VPR 177

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HG--------------- 404
            L   L G  V  VAC + HT      G  + +G    G LG HG               
Sbjct: 178 -LVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 405 ---------NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
                    +   V  P+ +ESL G  +  VACGP+H+A +     DR         LFT
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRT-------SLFT 289

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            G    GRLGH D E + LPT V  L + +    +CG   T  +T  G +YT G A  G+
Sbjct: 290 CGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGK 349

Query: 516 LGNPKAKDRSITV--VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           LG    +   +    V G L+ + V  ++ GS H A +T+ G +YTWG+   G L
Sbjct: 350 LGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNL 404



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 168/388 (43%), Gaps = 60/388 (15%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++   ++ + +S G    A+V   GE++ WG   +G+LG     D S P+LV+ L 
Sbjct: 124 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 183

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWG------HNNHGADL-----VGERRSRSHWLPRK 361
           G  V++V+C +  T      G  Y WG         HG  +     +G     +   P  
Sbjct: 184 GKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 243

Query: 362 L-----------FDTLDGVRVSKVACGEWHTAIVSTSGQ----LFTYGDGTFGVLGHGNL 406
           L            ++L G  ++ VACG +H+A +    Q    LFT G G  G LGHG+ 
Sbjct: 244 LASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDE 303

Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
           ++   P  V +L  + + ++ACG  HTA         C ++A  G L+TWG A  G+LG 
Sbjct: 304 EDRHLPTAVHALENVNITAIACGAHHTA---------CVTSA--GTLYTWGGAAFGKLG- 351

Query: 467 VDGER--KLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           +   R  +LLP  V+  L +   V  + G   +  +T  G++YT G    G L       
Sbjct: 352 LGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNL------- 404

Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFV 582
                        F +G    S   +  TS     T   ++   LG GD +     P  +
Sbjct: 405 -----------TRFFRGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACL 453

Query: 583 EALRDRQVESVVCGSSITAAICLHKSIS 610
            AL  + V  + C S+ T A C  + +S
Sbjct: 454 RALNGKGVVQLSCASTFTVAFCDPQRVS 481



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 47/248 (18%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC--- 304
           DA +P+L+++     V+ ++   +H      +G  + WG   +GRLG H +++  S    
Sbjct: 172 DASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLG 231

Query: 305 ---------------------PKLVECLSGINVQSVSCGEFQTCAL----TKSGEIYTWG 339
                                P+++E L G  +  V+CG + +  L         ++T G
Sbjct: 232 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCG 291

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              +G    G+   R   LP  +   L+ V ++ +ACG  HTA V+++G L+T+G   FG
Sbjct: 292 LGLNGRLGHGDEEDR--HLPTAVH-ALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348

Query: 400 VLGHGNLQNVSQ--PKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            LG G+ +  SQ  PK V   LR   V SVA G  H+A +              G+L+TW
Sbjct: 349 KLGLGSTRG-SQLLPKHVSGPLRNKAVVSVALGSQHSACVT-----------TDGELYTW 396

Query: 457 GDADKGRL 464
           G   +G L
Sbjct: 397 GQGRRGNL 404


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 166/344 (48%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA H  +++ +G+ F +    D  + H  +  +        L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSESI--------LQ 135

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG  R+       ++ + L GV ++
Sbjct: 136 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RTFPSTTTPQIVEHLAGVPLA 193

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG G+ ++   P  +E+L   KV+ +ACG  H
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV     Q +CG
Sbjct: 254 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 302

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++  GKV++ GS   GQLGN    D+ I +       E +K  S  S    ++
Sbjct: 303 RWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIM 362

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 363 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 402



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +T      P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 155 GGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 214

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ ++CG   +  LT+ G ++T+G   HG  
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ- 273

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 274 -LGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGG 331

Query: 406 L--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
              Q +  P +V S   LK++S      HT+    IM+
Sbjct: 332 TLDQLIPLPVKVSSSEELKLES------HTSEKELIMI 363



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 73/119 (61%), Gaps = 3/119 (2%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSG 544
           +Q +CG   ++ L+  G+++  G  +HGQLG  +    + T  +VE  L    +  IS+G
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVE-HLAGVPLAQISAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             H   L+  G++Y+WGKN  GQLGLG ++ +++P+ +EAL +++VE + CG S +A +
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 28/237 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGADHMLILSSDGKPFEYDYS----MKHLRSESILQEK--------KIIQITC 144

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
           G +H+ A+           + GG+LF WG    G+LG          P  V  L      
Sbjct: 145 GDYHSLAL-----------SKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLA 193

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           Q S G   ++ L+  G +Y+ G    GQLG  + ++KD S +++E  L  + V+ ++ G 
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD-SPSLIEA-LDNQKVEFLACGG 251

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 308


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 137/295 (46%), Gaps = 37/295 (12%)

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           +++ P+LV+ L  IN + VS G  Q   +  SGE+Y WG N+ G    G+RR  S  +PR
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDAS--VPR 177

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HG--------------- 404
            L   L G  V  VAC + HT      G  + +G    G LG HG               
Sbjct: 178 -LVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 405 ---------NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
                    +   V  P+ +ESL G  +  VACGP+H+A +     DR         LFT
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRT-------SLFT 289

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            G    GRLGH D E + LPT V  L + +    +CG   T  +T  G +YT G A  G+
Sbjct: 290 CGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGK 349

Query: 516 LGNPKAKDRSITV--VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           LG    +   +    V G L+ + V  ++ GS H A +T+ G +YTWG+   G L
Sbjct: 350 LGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNL 404



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 168/388 (43%), Gaps = 60/388 (15%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++   ++ + +S G    A+V   GE++ WG   +G+LG     D S P+LV+ L 
Sbjct: 124 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 183

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWG------HNNHGADL-----VGERRSRSHWLPRK 361
           G  V++V+C +  T      G  Y WG         HG  +     +G     +   P  
Sbjct: 184 GKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 243

Query: 362 L-----------FDTLDGVRVSKVACGEWHTAIVSTSGQ----LFTYGDGTFGVLGHGNL 406
           L            ++L G  ++ VACG +H+A +    Q    LFT G G  G LGHG+ 
Sbjct: 244 LASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDE 303

Query: 407 QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
           ++   P  V +L  + + ++ACG  HTA         C ++A  G L+TWG A  G+LG 
Sbjct: 304 EDRHLPTAVHALENVNITAIACGAHHTA---------CVTSA--GTLYTWGGAAFGKLG- 351

Query: 467 VDGER--KLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           +   R  +LLP  V+  L +   V  + G   +  +T  G++YT G    G L       
Sbjct: 352 LGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNL------- 404

Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFV 582
                        F +G    S   +  TS     T   ++   LG GD +     P  +
Sbjct: 405 -----------TRFFRGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACL 453

Query: 583 EALRDRQVESVVCGSSITAAICLHKSIS 610
            AL  + V  + C S+ T A C  + +S
Sbjct: 454 RALNGKGVVQLSCASTFTVAFCDPQRVS 481



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 47/248 (18%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSC--- 304
           DA +P+L+++     V+ ++   +H      +G  + WG   +GRLG H +++  S    
Sbjct: 172 DASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLG 231

Query: 305 ---------------------PKLVECLSGINVQSVSCGEFQTCAL----TKSGEIYTWG 339
                                P+++E L G  +  V+CG + +  L         ++T G
Sbjct: 232 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCG 291

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
              +G    G+   R   LP  +   L+ V ++ +ACG  HTA V+++G L+T+G   FG
Sbjct: 292 LGLNGRLGHGDEEDR--HLPTAVH-ALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348

Query: 400 VLGHGNLQNVSQ--PKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            LG G+ +  SQ  PK V   LR   V SVA G  H+A +              G+L+TW
Sbjct: 349 KLGLGSTRG-SQLLPKHVSGPLRNKAVVSVALGSQHSACVT-----------TDGELYTW 396

Query: 457 GDADKGRL 464
           G   +G L
Sbjct: 397 GQGRRGNL 404


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 166/344 (48%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA H  +++ +G+ F +    D  + H  +  +        L 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEY----DYSMKHLRSESI--------LQ 135

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG  R+       ++ + L GV ++
Sbjct: 136 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG--RTFPSTTTPQIVEHLAGVPLA 193

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG G+ ++   P  +E+L   KV+ +ACG  H
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSH 253

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +              G LFT+G    G+LGH   + +L P  V  LV     Q +CG
Sbjct: 254 SALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACG 302

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++  GKV++ GS   GQLGN    D+ I +       E +K  S  S    ++
Sbjct: 303 RWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIM 362

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 363 IAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 402



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +T      P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 155 GGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 214

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ ++CG   +  LT+ G ++T+G   HG  
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ- 273

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 274 -LGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGG 331

Query: 406 L--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
              Q +  P +V S   LK++S      HT+    IM+
Sbjct: 332 TLDQLIPLPVKVSSSEELKLES------HTSEKELIMI 363



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 73/119 (61%), Gaps = 3/119 (2%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSG 544
           +Q +CG   ++ L+  G+++  G  +HGQLG  +    + T  +VE  L    +  IS+G
Sbjct: 140 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVE-HLAGVPLAQISAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             H   L+  G++Y+WGKN  GQLGLG ++ +++P+ +EAL +++VE + CG S +A +
Sbjct: 199 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 28/237 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSVDQGADHMLILSSDGKPFEYDYS----MKHLRSESILQEK--------KIIQITC 144

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
           G +H+ A+           + GG+LF WG    G+LG          P  V  L      
Sbjct: 145 GDYHSLAL-----------SKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLA 193

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           Q S G   ++ L+  G +Y+ G    GQLG  + ++KD S +++E  L  + V+ ++ G 
Sbjct: 194 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD-SPSLIEA-LDNQKVEFLACGG 251

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 308


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 158/357 (44%), Gaps = 32/357 (8%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
           +L P +++  +  DV  +S G  H+A + ++G ++ WG G  GRLGH    ++  P+ VE
Sbjct: 292 SLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVE 351

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDG 368
              G+ V  V+CG F T ALT  G ++ WG         GE        +P+ L D    
Sbjct: 352 GFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDI--E 409

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           V V  VA G +H+A V+  G L  +G G    LGHG+ QN   PK V  LR         
Sbjct: 410 VAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRM------ 463

Query: 429 GPWHTAAIVDIM-VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
              + A +  ++ V R + +        + D D      V GE             +   
Sbjct: 464 ---YVADLQSMLGVSRLRRD--------YSDFD------VLGESAG--GAGANAAAWTLQ 504

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSY 546
              CG   TV LTG G V+  GS   GQLG   + ++     V+       ++ I+ GS 
Sbjct: 505 SLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSK 564

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   +   G V+ WG N +GQLGLG  +    P  V AL  RQ   V CG   +A I
Sbjct: 565 HCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTAL--RQAIDVFCGDDYSACI 619



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 158/385 (41%), Gaps = 60/385 (15%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKE-----GEVFCWGEGKDGRLGHK-------- 297
           + P L+       V  +S G  ++A++ K      G+V+ +G G  GRLG+         
Sbjct: 91  VFPGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGA 150

Query: 298 --------------VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
                          +     P  V       +  +SCG   T AL+  G +Y WG  ++
Sbjct: 151 RQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSY 210

Query: 344 GADLVGERRSRSHWLPRKLF------------------DTLDGVRVSKVACGEWHTAIVS 385
           G   +G+  +   + P ++                      D V V+  A G  H+   +
Sbjct: 211 GN--LGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACT 268

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           + G L+T+G G  G LG G+ +    P  V+ +    V  V+ G  H+A I     DR  
Sbjct: 269 SDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACI-----DR-- 321

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G L+TWG    GRLGH D     +P  V        +Q +CG   T+ LT  G V
Sbjct: 322 ----QGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTV 377

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +  G+ +   LG  +     +  V   L   E  V  +++G YH A +T GG +  WG  
Sbjct: 378 FAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVG 437

Query: 564 ANGQLGLGDSQERETPTFVEALRDR 588
            + +LG GD Q +  P +V  LR+R
Sbjct: 438 GSSRLGHGDQQNQPFPKYVADLRNR 462



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 58/360 (16%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV--- 308
           +PK L S + + V N++ G  H+A VT  G++  WG G   RLGH    +   PK V   
Sbjct: 401 VPKHL-SDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADL 459

Query: 309 ---------ECLSGIN---------------------------VQSVSCGEFQTCALTKS 332
                    + + G++                           +QS+ CGE  T ALT +
Sbjct: 460 RNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGT 519

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQL 390
           G ++ WG N+ G   +GE+     + P KL  F T     + ++ACG  H   V+  G +
Sbjct: 520 GAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST----PIRRIACGSKHCLAVAQYGDV 575

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI- 449
           F +G    G LG G L+   +P  V +LR  +   V CG  ++A I      +  S A+ 
Sbjct: 576 FAWGANDDGQLGLGVLRPSFEPAAVTALR--QAIDVFCGDDYSACITSNGGAQTVSLALE 633

Query: 450 ----GGKLFTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFVQASC--GRMLTVGLTGL 502
                G L+TWG A+ G+LG   GE     + +T + V F     +C  G    + +T  
Sbjct: 634 SGTEFGDLWTWGAAESGKLGL--GEDVASGSILTPQKVPFSVPVCACSLGTSHALAITAR 691

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G+ Y  G+  +G+LG     +          K   ++ +++G+ H   L+  G ++ WGK
Sbjct: 692 GECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGK 751



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 147/340 (43%), Gaps = 48/340 (14%)

Query: 264 VQNISLGAKHAALVTKEGE---VFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSV 319
           V+ ++LG  H  +V  +G+   +  WG+  +  LG  V   +   P LV   S   V  V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107

Query: 320 SCGEFQTCALTK-----SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL-------- 366
           SCG   +  L K      G++YT+G  N G   +G  +S++    R+  D          
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLGNRGR--LGYPKSKAEGGARQQGDDAGDGQEDGP 165

Query: 367 -------------DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
                        D  ++++++CG  HT  +S  G L+ +G G++G LG G+  +   P 
Sbjct: 166 SWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPV 225

Query: 414 EV----ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA-------IGGKLFTWGDADKG 462
            V    E   G K +++  G   T  +V   V  C + A         G L+TWG    G
Sbjct: 226 RVLLGSEKGSGKKKENLGIGRRGTDPVV---VTCCAAGAKHSMACTSDGTLWTWGHGGNG 282

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           RLG       L P  V  ++D D V  S G   +  +   G +YT GS   G+LG+    
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342

Query: 523 DRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           +  +   VEG      V  ++ G++H   LT  G+V+ WG
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWG 381



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 179/461 (38%), Gaps = 86/461 (18%)

Query: 209 SPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNIS 268
           S  I+R+ +L     WG G  G  +G    G +          +P+ +E    + V  ++
Sbjct: 316 SACIDRQGVL---YTWGSGGFG-RLGHGDQGEIP---------VPRKVEGFGGVPVLQVA 362

Query: 269 LGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ--SVSCGEFQT 326
            G  H   +T +G VF WG G    LG   +       + + LS I V   +V+ G + +
Sbjct: 363 CGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHS 422

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV------------ 374
            A+T  G++  WG    G+  +G    ++   P+ + D  + + V+ +            
Sbjct: 423 AAVTVGGDLLVWGVG--GSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRD 480

Query: 375 --------------------------ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
                                      CGE HT  ++ +G ++ +G    G LG G    
Sbjct: 481 YSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVE 540

Query: 409 VSQPKEVE-SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
             Q + V+       ++ +ACG  H           C + A  G +F WG  D G+LG  
Sbjct: 541 EDQYEPVKLDCFSTPIRRIACGSKH-----------CLAVAQYGDVFAWGANDDGQLGLG 589

Query: 468 DGERKLLPTCVTRLV---------DFDFVQASCGRMLTVGL-----TGLGKVYTMGSAVH 513
                  P  VT L          D+     S G   TV L     T  G ++T G+A  
Sbjct: 590 VLRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAES 649

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           G+LG    +D +   +    K  F   V   S G+ H   +T+ G  Y WG    G+LG+
Sbjct: 650 GKLG--LGEDVASGSILTPQKVPFSVPVCACSLGTSHALAITARGECYAWGAGYYGRLGI 707

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
           G +     PT  +  +  ++ SV  G+S + A+ +   + +
Sbjct: 708 GTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWI 748



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 116/278 (41%), Gaps = 51/278 (18%)

Query: 371 VSKVACGEWHTAIVSTSG---QLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSV 426
           V +VA G +HT +V   G   QL  +G     VLG G   +    P  V       V  V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV------------------- 467
           +CG  ++A    ++V R + +  GGK++T+G  ++GRLG+                    
Sbjct: 108 SCGTNNSA----VLVKRAQQS--GGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQ 161

Query: 468 -DGERKLLPTCV-TRLVD-FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            DG     P     R  D     + SCG   T+ L+  G +Y  G   +G LG     D 
Sbjct: 162 EDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDA 221

Query: 525 SITVV--------EGKLKEEFVKG-----------ISSGSYHVAVLTSGGSVYTWGKNAN 565
              V          GK KE    G            ++G+ H    TS G+++TWG   N
Sbjct: 222 YSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGN 281

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+LGLG ++   +P  V+ + DR V  V  G S +A I
Sbjct: 282 GRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACI 319



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 28/226 (12%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           SLG  HA  +T  GE + WG G  GRLG     +   P   +   G+ ++SV+ G   + 
Sbjct: 679 SLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSL 738

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD---GV-RVSKVACGEWHTAI 383
           AL+  G+++ WG          +  S +++   ++F  L+   GV +V  +A  E H+  
Sbjct: 739 ALSMDGDLWIWGKKE-------DTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLA 791

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQ--NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           V+ +G++F +GD      G G  Q   + +P+ +  L  +  + VA GP  +  ++    
Sbjct: 792 VTETGEVFAWGDNKLYQTGCGKRQAERLDRPEMIAGLPNV-CQWVATGPQASFFVL---- 846

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCV-TRLVDF 484
             C      G+++  G  + GRLG    +RK    P  V T   DF
Sbjct: 847 --CS-----GEVYAAGVINGGRLGTGWSKRKYQFAPAAVLTHWADF 885



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 134/347 (38%), Gaps = 65/347 (18%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGE---IYTWGHN-NHGADLVGERRSRSHWLPRKLFDTL 366
           L   +V+ V+ G + T  +   G+   +  WG N N+   L  E R R    P  L    
Sbjct: 43  LGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERV--FP-GLVPFF 99

Query: 367 DGVRVSKVACGEWHTAIV-----STSGQLFTYGDGTFGVLGH----------------GN 405
               V +V+CG  ++A++      + G+++T+G G  G LG+                G+
Sbjct: 100 SRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGD 159

Query: 406 LQN------VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            Q         +P  V      K+  ++CG  HT A+ D           GG L+ WG  
Sbjct: 160 GQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSD-----------GGALYAWGVG 208

Query: 460 DKGRLGHVDGERKLLPTCVTRLVD----------------FDFVQASC---GRMLTVGLT 500
             G LG  D      P  V    +                 D V  +C   G   ++  T
Sbjct: 209 SYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACT 268

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G ++T G   +G+LG    +      V   + +  V  +S+G  H A +   G +YTW
Sbjct: 269 SDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTW 328

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
           G    G+LG GD  E   P  VE      V  V CG+  T A+  HK
Sbjct: 329 GSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HK 374



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 134/347 (38%), Gaps = 46/347 (13%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSC 321
           +Q++  G  H   +T  G V+ WG   +G+  LG +V  D   P  ++C S   ++ ++C
Sbjct: 503 LQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIAC 561

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G     A+ + G+++ WG N+ G   +G    R  + P  +      +    V CG+ ++
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQ--LGLGVLRPSFEPAAVTALRQAI---DVFCGDDYS 616

Query: 382 AIVSTS----------------GQLFTYGDGTFGVLGHGN---LQNVSQPKEVESLRGLK 422
           A ++++                G L+T+G    G LG G      ++  P++V       
Sbjct: 617 ACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVP----FS 672

Query: 423 VKSVAC--GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
           V   AC  G  H  AI              G+ + WG    GRLG         PT    
Sbjct: 673 VPVCACSLGTSHALAIT-----------ARGECYAWGAGYYGRLGIGTTANAYAPTKCDF 721

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
                    + G   ++ L+  G ++  G              R    +E       VK 
Sbjct: 722 PKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKS 781

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ER-ETPTFVEAL 585
           I++  +H   +T  G V+ WG N   Q G G  Q ER + P  +  L
Sbjct: 782 IAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRPEMIAGL 828



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 10/163 (6%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T  +A  P   +    + +++++ GA H+  ++ +G+++ WG+ +D         + + P
Sbjct: 709 TTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKED----TCSTTNYNSP 764

Query: 306 KL---VECLSGI-NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           ++   +E  SG+  V+S++  E  + A+T++GE++ WG N       G+R++     P +
Sbjct: 765 RIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRP-E 823

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
           +   L  V    VA G   +  V  SG+++  G    G LG G
Sbjct: 824 MIAGLPNV-CQWVATGPQASFFVLCSGEVYAAGVINGGRLGTG 865


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 16/336 (4%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLV 308
            ++P+ ++ +   +V  +  G  H   +TKEG+++  G    G+LGH ++ +    P+ +
Sbjct: 24  VMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRL 83

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L    +  +SCG   + ALT  G++++WG N  G   +G           ++   +  
Sbjct: 84  TSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ--LGHDAENGRQPTPRMIKAIGA 141

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVA 427
             V ++A G++H   ++ +G+L+ +G  ++G LG G   + V  P  ++SL G+ +  +A
Sbjct: 142 KHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIA 201

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H+ A+        KS AI    F WG    G+LG  D   +  PT +  L      
Sbjct: 202 CGGNHSFAV-------SKSGAI----FGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVR 250

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             SCG   +V LT  G V+T G+   GQLG+    +  +     +L    +  I+ G  H
Sbjct: 251 YISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRH 310

Query: 548 -VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            +A + S G +Y +G    GQLG+G      TP  V
Sbjct: 311 TLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIV 346



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 19/326 (5%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG    G LG        V  P+ ++      V  V CG   T  LTK G++Y  G+
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+HG  L  +  +  +  P++L  +L+   ++ ++CG  H+  ++  GQ+F++G    G 
Sbjct: 63  NDHG-QLGHDLDTLPNKRPQRL-TSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 120

Query: 401 LGHGNLQNVSQP--KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           LGH + +N  QP  + ++++    V  +A G +H  A+ +            G+L+ WG 
Sbjct: 121 LGH-DAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTN-----------NGELYAWGS 168

Query: 459 ADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              G+LG     E+  +PT +  L        +CG   +  ++  G ++  G    GQLG
Sbjct: 169 NSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                 R        L+   V+ IS G      LT+ G V+T G    GQLG G      
Sbjct: 229 LNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEI 288

Query: 578 TPTFVEALRDRQVESVVCGSSITAAI 603
            P  V  L   ++  + CG   T A 
Sbjct: 289 VPRKVFELMGSKITQIACGRRHTLAF 314


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 158/362 (43%), Gaps = 23/362 (6%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           +G+ + + T VD  LP          +  ++ G  H+  +T  G V  WG    G+LG+ 
Sbjct: 71  NGTTTGSSTPVDVYLPA------GTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNG 124

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
              + S P  V+  +G  + +++ G F + ALT +G +  WG N HG    G   + S  
Sbjct: 125 DTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTP 184

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           +   L     GV ++ VA G +H+  V+++G +  +GD + G LG+G     S P +V+ 
Sbjct: 185 VGVSLP---AGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDL 241

Query: 418 LRGLKVK---SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
             G  +    +   G  H+ A+              G    WG+   G+LG+ D   +  
Sbjct: 242 PAGTTITAVAAGVAGAAHSLALTST-----------GAALAWGNNADGQLGNGDTTNRST 290

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
           P  V           + G + ++ LT  G V   G  V GQLGN      S  V      
Sbjct: 291 PVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPT 350

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
              +  I++G      LT+ G+V  WG+N +GQLG GD+  R TP  V+      + +V 
Sbjct: 351 GATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVA 410

Query: 595 CG 596
            G
Sbjct: 411 AG 412



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 142/325 (43%), Gaps = 35/325 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           F WG+  DG+LG+      S P  V   +G  + +V+ G   + ALT +G +  WG N  
Sbjct: 59  FAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFS 118

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G    G+  +RS   P  + D   G  ++ +A G +H+  ++++G +  +G+   G LG+
Sbjct: 119 GQLGNGDTTNRS--TPVDV-DLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGN 175

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           G   N+S P  V    G+ + +VA G +H+ A+              G +  WGD   G+
Sbjct: 176 GGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTST-----------GAVLAWGDNSNGQ 224

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT------------VGLTGLGKVYTMGSA 511
           LG+        P      VD D      G  +T            + LT  G     G+ 
Sbjct: 225 LGNGTTTGSSTP------VDVDL---PAGTTITAVAAGVAGAAHSLALTSTGAALAWGNN 275

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLGN    +RS  V         +  +++G  H   LT+ G+V  WG+N +GQLG G
Sbjct: 276 ADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNG 335

Query: 572 DSQERETPTFVEALRDRQVESVVCG 596
            +    TP  V+      + ++  G
Sbjct: 336 TTTGSSTPVDVDLPTGATINAIAAG 360



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 140/334 (41%), Gaps = 27/334 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG     G +G   +G  +   T VD  LP          +  I+ GA H+  +T  
Sbjct: 110 VLAWGRN-FSGQLG---NGDTTNRSTPVDVDLPA------GTTITAIAAGAFHSLALTSA 159

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V  WGE   G+LG+    ++S P  V   +G+ + +V+ G F + A+T +G +  WG 
Sbjct: 160 GTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGD 219

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVS---KVACGEWHTAIVSTSGQLFTYGDGT 397
           N++G   +G   +     P  + D   G  ++       G  H+  ++++G    +G+  
Sbjct: 220 NSNGQ--LGNGTTTGSSTPVDV-DLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNA 276

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LG+G+  N S P +V+   G+ + +VA G  H+ A+              G +  WG
Sbjct: 277 DGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALT-----------AAGAVVAWG 325

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG+        P  V           + G    + LT  G V   G  V GQLG
Sbjct: 326 RNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLG 385

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           N    +RS  V         +  +++G  H   L
Sbjct: 386 NGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 123/214 (57%), Gaps = 14/214 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC 321
           ++  I+ G  H+  ++K GE+F WG+  DG+LG  ++    S P++VE LSG+ +  +S 
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           GE  + AL+ SG +Y+WG N+ G   +G   ++         + LD  +V  +ACG  HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKE---SPSCIEALDDQKVEFLACGGCHT 269

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A+++ SG +FT+GDG +G LGH + QN  +P+ V  L G +V  +ACG  HT A V    
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV---- 325

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                 +  GK+F++G   +G+LG+     +L+P
Sbjct: 326 ------SDTGKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  G +H  +++ +G+ F            +    +   +    L 
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPF------------EYKYSIEHARFQCILQ 150

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             N+  ++CG++ + AL+K GE++ WG N  G   VG R   S   P ++ + L GV + 
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTP-EIVENLSGVPLV 208

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+  N   P  +E+L   KV+ +ACG  H
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 268

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G +FT+GD   G+LGH   + +L P  VT LV     Q +CG
Sbjct: 269 TALLTK-----------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACG 317

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++  GKV++ GS   GQLGN   +++ I      L  E +K  SS S    ++
Sbjct: 318 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIM 377

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W +  N  + L     R+ PT  E    R +  V
Sbjct: 378 VAGGNQSILIWMEKENSYVNL----RRKIPTLNEGTVKRWIADV 417



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 7/188 (3%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  +DG +   +       P+++E+   + +  IS G  H+  ++  G V+ W
Sbjct: 170 GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSW 229

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G    G+LG     +   P  +E L    V+ ++CG   T  LTKSG ++T+G   +G  
Sbjct: 230 GRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQ- 288

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   PR L   L G RV+++ACG  HT A VS +G++F++G G  G LG+G 
Sbjct: 289 -LGHNSTQNELRPR-LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGG 346

Query: 406 LQNVSQPK 413
            +N   P+
Sbjct: 347 TRNQLIPR 354



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 26/236 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  +  GE H  ++S+ G+ F Y       + H   Q + Q K         +  + C
Sbjct: 112 MKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQCILQEK--------NIIQITC 159

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG   +       P  V  L     
Sbjct: 160 GDYHSLAL-----------SKGGELFAWGQNLDGQLGVGRIFASTST-PEIVENLSGVPL 207

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G   ++ L+  G VY+ G    GQLG     ++        L ++ V+ ++ G  
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           H A+LT  G V+T+G    GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 323



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 3/121 (2%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGIS 542
           + +Q +CG   ++ L+  G+++  G  + GQLG  +  A   +  +VE       V+ IS
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQ-IS 211

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +G  H   L+  G+VY+WG+N  GQLGLG +  +E+P+ +EAL D++VE + CG   TA 
Sbjct: 212 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTAL 271

Query: 603 I 603
           +
Sbjct: 272 L 272


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 22/288 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G  G    G  D S     T VDAL    +       + +++ G+ H A V   
Sbjct: 1   VFSWGRGEDGQL--GIGDTSDQDEPTYVDALRGVGI-------ITHVTCGSYHTAAVASN 51

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+++ WG G  G+LGH      S P+ VE L G+++  ++CG   T  +T  G +YTWG 
Sbjct: 52  GDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGD 111

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             +G  + G   +  H    KL + L+G +V +++   +HTA ++   + F +G+G FG 
Sbjct: 112 KENG--VAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGR 169

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG+G  +N   P+ +ESL G     VACG +H+A I              GK++T+G  +
Sbjct: 170 LGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITR-----------DGKMYTFGGGE 218

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
            G+LGH D   KL PT V  L      Q +CG   +V LT  G+ + +
Sbjct: 219 HGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHLV 266



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 142/279 (50%), Gaps = 18/279 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS-VSCGEFQTCALTKSGEIYTWGHN 341
           VF WG G+DG+LG     D   P  V+ L G+ + + V+CG + T A+  +G++YTWG  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
            +G   +G      H  PR++ + L G+ +  +ACG  HTA+V++ G L+T+GD   GV 
Sbjct: 61  MYGK--LGHGNESGHSTPRRV-EALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117

Query: 402 GHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           GHG+ + +   PK +E L G KV  ++   +HTA + D             + F WG+  
Sbjct: 118 GHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDH-----------ETFAWGEGK 166

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP- 519
            GRLG+        P  +  L+     Q +CG   +  +T  GK+YT G   HGQLG+  
Sbjct: 167 FGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHAD 226

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           K      T+VE  L    VK I+ G  H   LTS G  +
Sbjct: 227 KVNKLKPTLVE-ALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 137/272 (50%), Gaps = 18/272 (6%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV-SKVACGEWHTAIVSTSGQLFTY 393
           +++WG    G   +G+   +         D L GV + + V CG +HTA V+++G L+T+
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQD---EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTW 57

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G G +G LGHGN    S P+ VE+L GL +  +ACG  HTA +              G L
Sbjct: 58  GGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSK-----------GCL 106

Query: 454 FTWGDADKGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +TWGD + G  GH D E  +  P  + RL     VQ S     T  LT   + +  G   
Sbjct: 107 YTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGK 166

Query: 513 HGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            G+LGN   ++  S  ++E  L  ++   ++ G +H AV+T  G +YT+G   +GQLG  
Sbjct: 167 FGRLGNGTERNCHSPRLIE-SLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHA 225

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           D   +  PT VEAL    V+ + CG S + A+
Sbjct: 226 DKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 160/355 (45%), Gaps = 36/355 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H    T  G V+CWG    G+LG     D S P  V  L    V +++ G 
Sbjct: 368 VTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLP-SGVTAIAAGN 426

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCALT S  ++ WG N +G    G   +RS   P  +     GV  + +A G +HT  
Sbjct: 427 YHTCALTGSDGVWCWGDNFYGQLGDGTTTNRS--TPGAVSGLPSGV--TAIAAGNYHTCA 482

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +++SG ++ +G    G LG G   N S P  V  L    V ++A G +HT A++      
Sbjct: 483 LTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAGDYHTCALMSS---- 537

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG  ++G+LG         P  V  L       A+ G   T  LTG  
Sbjct: 538 -------GGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMAIAA-GNYHTCALTGSD 589

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G+   GQLG+    +RS  V    L    V  I++G+YH   LTS G V+ WG N
Sbjct: 590 GVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG-VTAIAAGNYHTCALTSSGGVWCWGYN 648

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
            +GQLG G +  R TP  V  L           S +TA       I+ GD+ +C+
Sbjct: 649 LSGQLGDGTTTNRSTPGAVSGLP----------SGVTA-------IAAGDEHTCA 686



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 156/341 (45%), Gaps = 20/341 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V  I+ G  H   +T  G V+CWG+   G+LG     D S P  V  L    V +++ G
Sbjct: 214 EVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLP-SGVTAIAAG 272

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              TCALT SG ++ WG N+ G    G   +RS   P  +     GV  + +A G  HT 
Sbjct: 273 GRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRS--TPGAVGGLPSGV--TAIAAGGAHTC 328

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +++SG ++ +G    G LG G+  + S P  V  L    V ++A G  HT A       
Sbjct: 329 ALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLP-SGVTAIAAGGAHTCA------- 380

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
           R  S    G ++ WG    G+LG      +  P  V+ L        + G   T  LTG 
Sbjct: 381 RTSS----GGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGS 435

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
             V+  G   +GQLG+    +RS       L    V  I++G+YH   LTS G V+ WG+
Sbjct: 436 DGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGNYHTCALTSSGGVWCWGR 494

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N +GQLG G +  R TP  V  L    V ++  G   T A+
Sbjct: 495 NDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAGDYHTCAL 534



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 139/319 (43%), Gaps = 19/319 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +T  G V+CWG    G+LG     + S P  V  L    V +++ G+
Sbjct: 470 VTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAGD 528

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCAL  SG ++ WG NN G    G     S   P  +     GV    +A G +HT  
Sbjct: 529 YHTCALMSSGGVWCWGLNNRGQLGDGSYTDSS--TPVAVGGLPSGVM--AIAAGNYHTCA 584

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ S  ++ +G  + G LG G   N S P  V  L    V ++A G +HT A+       
Sbjct: 585 LTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLP-SGVTAIAAGNYHTCALTSS---- 639

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WG    G+LG      +  P  V+ L        + G   T  LTG G
Sbjct: 640 -------GGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGDEHTCALTGSG 691

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G   +GQLG+    +RS       L    V  I++G YH   LT  G V  WG N
Sbjct: 692 GVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNN 750

Query: 564 ANGQLGLGDSQERETPTFV 582
            +GQLG G    R TP  V
Sbjct: 751 GDGQLGDGRPLYRTTPVDV 769



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 152/342 (44%), Gaps = 20/342 (5%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           + T  D   P  + S +   V  I+ G  H   +T    V+CWG+   G+LG     + S
Sbjct: 400 DGTTTDRSTPGAV-SGLPSGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRS 458

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            P  V  L    V +++ G + TCALT SG ++ WG N+ G    G   +RS   P  + 
Sbjct: 459 TPGAVSGLP-SGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRS--TPGAVG 515

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
               GV  + +A G++HT  + +SG ++ +G    G LG G+  + S P  V  L    V
Sbjct: 516 GLPSGV--TAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLP-SGV 572

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
            ++A G +HT A+         S+ +    + WG    G+LG      +  P  V+ L  
Sbjct: 573 MAIAAGNYHTCALT-------GSDGV----WCWGTNSDGQLGDGTTTNRSTPVAVSGLPS 621

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
                 + G   T  LT  G V+  G  + GQLG+    +RS       L    V  I++
Sbjct: 622 -GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSG-VTAIAA 679

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           G  H   LT  G V+ WG N  GQLG G +  R TP  V  L
Sbjct: 680 GDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGL 721



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 148/339 (43%), Gaps = 20/339 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G+ H   +T  GEV+CWG    G+LG     D S P  V  L    V +++ G 
Sbjct: 62  VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLP-SGVTAIAAGG 120

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             TCALT SG +  WG N  G    G    RS   P  +     G  V+ +A G  HT  
Sbjct: 121 AHTCALTSSGGVMCWGGNYFGQLGDGSYTDRS--TPVAVSGLPSG--VTAIAAGGAHTCA 176

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           + +SG ++ +G    G LG G+      P  V  L   +V ++A G  HT A+       
Sbjct: 177 LMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLP-SEVTAIAAGYAHTCALTGS---- 231

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WGD   G+LG         P  V  L       A+ GR  T  LT  G
Sbjct: 232 -------GGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRY-TCALTSSG 283

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G    GQLG+    +RS     G L    V  I++G  H   LTS G V+ WG N
Sbjct: 284 GVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG-VTAIAAGGAHTCALTSSGGVWCWGGN 342

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            +GQLG G   +R TP  V  L    V ++  G + T A
Sbjct: 343 DSGQLGDGSYTDRSTPGAVSGLP-SGVTAIAAGGAHTCA 380



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 132/289 (45%), Gaps = 19/289 (6%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            V +++ G + TCALT SGE++ WG+N  G    G    RS   P  +     G  V+ +
Sbjct: 61  GVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS--TPVAVSGLPSG--VTAI 116

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           A G  HT  +++SG +  +G   FG LG G+  + S P  V  L    V ++A G  HT 
Sbjct: 117 AAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLP-SGVTAIAAGGAHTC 175

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           A++             G ++ WG    G+LG       + P  V+ L   +    + G  
Sbjct: 176 ALMSS-----------GGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPS-EVTAIAAGYA 223

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            T  LTG G V+  G    GQLG+    D S     G L    V  I++G  +   LTS 
Sbjct: 224 HTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSG-VTAIAAGGRYTCALTSS 282

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G V+ WG+N +GQLG G    R TP  V  L    V ++  G + T A+
Sbjct: 283 GGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLP-SGVTAIAAGGAHTCAL 330



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 60/135 (44%), Gaps = 8/135 (5%)

Query: 475 PTCVTRLVDFDF------VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
           P+  TRL    F         + G   T  LTG G+V+  G    GQLG+    DRS  V
Sbjct: 45  PSTTTRLHTSSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV 104

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
               L    V  I++G  H   LTS G V  WG N  GQLG G   +R TP  V  L   
Sbjct: 105 AVSGLPSG-VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLP-S 162

Query: 589 QVESVVCGSSITAAI 603
            V ++  G + T A+
Sbjct: 163 GVTAIAAGGAHTCAL 177


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 123/214 (57%), Gaps = 14/214 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC 321
           ++  I+ G  H+  ++K GE+F WG+  DG+LG  ++    S P++VE LSG+ +  +S 
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           GE  + AL+ SG +Y+WG N+ G   +G   ++         + LD  +V  +ACG  HT
Sbjct: 208 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKE---SPSCIEALDDQKVEFLACGGCHT 264

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A+++ SG +FT+GDG +G LGH + QN  +P+ V  L G +V  +ACG  HT A V    
Sbjct: 265 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV---- 320

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                 +  GK+F++G   +G+LG+     +L+P
Sbjct: 321 ------SDTGKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  G +H  +++ +G+ F            +    +   +    L 
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPF------------EYKYSIEHARFQCILQ 145

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             N+  ++CG++ + AL+K GE++ WG N  G   VG R   S   P ++ + L GV + 
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTP-EIVENLSGVPLV 203

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G    G LG G+  N   P  +E+L   KV+ +ACG  H
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 263

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G +FT+GD   G+LGH   + +L P  VT LV     Q +CG
Sbjct: 264 TALLTK-----------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACG 312

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++  GKV++ GS   GQLGN   +++ I      L  E +K  SS S    ++
Sbjct: 313 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIM 372

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W +  N  + L     R+ PT  E    R +  V
Sbjct: 373 VAGGNQSILIWMEKENSYVNL----RRKIPTLNEGTVKRWIADV 412



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 7/188 (3%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  +DG +   +       P+++E+   + +  IS G  H+  ++  G V+ W
Sbjct: 165 GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSW 224

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G    G+LG     +   P  +E L    V+ ++CG   T  LTKSG ++T+G   +G  
Sbjct: 225 GRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQ- 283

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   PR L   L G RV+++ACG  HT A VS +G++F++G G  G LG+G 
Sbjct: 284 -LGHNSTQNELRPR-LVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGG 341

Query: 406 LQNVSQPK 413
            +N   P+
Sbjct: 342 TRNQLIPR 349



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 26/236 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  +  GE H  ++S+ G+ F Y       + H   Q + Q K         +  + C
Sbjct: 107 MKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQCILQEK--------NIIQITC 154

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG   +       P  V  L     
Sbjct: 155 GDYHSLAL-----------SKGGELFAWGQNLDGQLGVGRIFASTST-PEIVENLSGVPL 202

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G   ++ L+  G VY+ G    GQLG     ++        L ++ V+ ++ G  
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           H A+LT  G V+T+G    GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 263 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 318



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 3/121 (2%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGIS 542
           + +Q +CG   ++ L+  G+++  G  + GQLG  +  A   +  +VE       V+ IS
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQ-IS 206

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +G  H   L+  G+VY+WG+N  GQLGLG +  +E+P+ +EAL D++VE + CG   TA 
Sbjct: 207 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTAL 266

Query: 603 I 603
           +
Sbjct: 267 L 267


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 180/381 (47%), Gaps = 92/381 (24%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKV-NMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
            G +H+  V  +  V+ WG+ K G+LGH   ++  + PK++E +SG  +Q+++ G   T  
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIV 1340

Query: 329  LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGV-----RVSKVACGEWHTA 382
            L KSGE+Y++G+ + G    G   S+S  +P ++  +T+ G+     +++++ACG  H+ 
Sbjct: 1341 LKKSGELYSFGYGDQGQLGHGSFVSKS--IPTRIELNTIVGIQHGGGKITQIACGFGHSV 1398

Query: 383  IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            I S +G+++++G G  G LGHGN +++++P+ +E+L+G  V  ++CG ++T A  D+   
Sbjct: 1399 ICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKISCGHFYTMATTDL--- 1453

Query: 443  RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS-----CGRMLTV 497
                      +++WG  +  +LGH   + +  P    R+VDF F+Q +     CG   T+
Sbjct: 1454 --------KNVYSWGLGEHMKLGHGSDKNEATP----RVVDF-FIQKNVSKIVCGLNHTI 1500

Query: 498  GLTGLGK----------------------------------------------------- 504
             LT  G                                                      
Sbjct: 1501 TLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSP 1560

Query: 505  VYTMGSAVHGQLG------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
            +Y  G+  HG+LG      +P       T ++G      +  IS G+   A++TS G++Y
Sbjct: 1561 IYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLID-ISCGTDFTAMITSNGALY 1619

Query: 559  TWGKNANGQLGLGDSQERETP 579
             WG    GQ+G G + +   P
Sbjct: 1620 VWGYGNFGQIGNGKTDDAWVP 1640



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 35/306 (11%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGIN-VQSVSCGE 323
            +S G  H AL+++ GE+F WG+ + G+LGH +++    + PK +E   G + +  V CG 
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGG 1282

Query: 324  FQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
              +  +     +Y+WG +      HG   V + R        K+ + + G ++  +A G 
Sbjct: 1283 EHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRP-------KIIEDISGQKIQAIAAGF 1335

Query: 379  WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGL-----KVKSVACGPW 431
             HT ++  SG+L+++G G  G LGHG+  + S P  +E  ++ G+     K+  +ACG  
Sbjct: 1336 AHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFG 1395

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
            H+          C  N   G++++WG   +G+LGH + E    P  +  L      + SC
Sbjct: 1396 HSVI--------CSDN---GEVYSWGLGKQGQLGHGNYESIARPRLIEALK--GVTKISC 1442

Query: 492  GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            G   T+  T L  VY+ G   H +LG+   K+ +   V     ++ V  I  G  H   L
Sbjct: 1443 GHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITL 1502

Query: 552  TSGGSV 557
            T  G +
Sbjct: 1503 TYPGDL 1508



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 30/254 (11%)

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNV-SQPKEVESLRGLK-VKSV 426
            R  KV+CG  H A++S SG+LFT+G    G LGHG ++  + + PK +E  RG   +  V
Sbjct: 1219 RAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMV 1278

Query: 427  ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH----VDGERKLLPTCVTRLV 482
             CG  H+  +    V           +++WG    G+LGH    V   R   P  +  + 
Sbjct: 1279 ECGGEHSICVDSDYV-----------VYSWGQDKFGQLGHGTKSVSQNR---PKIIEDIS 1324

Query: 483  DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-------TVVEGKLKE 535
                   + G   T+ L   G++Y+ G    GQLG+     +SI       T+V  +   
Sbjct: 1325 GQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGG 1384

Query: 536  EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
              +  I+ G  H  + +  G VY+WG    GQLG G+ +    P  +EAL+   V  + C
Sbjct: 1385 GKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKISC 1442

Query: 596  GSSITAAICLHKSI 609
            G   T A    K++
Sbjct: 1443 GHFYTMATTDLKNV 1456



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 283  VFCWGEGKDGRLGHKVNM-----DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
            ++  G G+ G+LG   ++     D   P  ++ ++ +N+  +SCG   T  +T +G +Y 
Sbjct: 1561 IYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYV 1620

Query: 338  WGHNNHGADLVGERRSRSHWLPRKL 362
            WG+ N G   +G  ++   W+P ++
Sbjct: 1621 WGYGNFGQ--IGNGKTDDAWVPIRI 1643


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 160/323 (49%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++ GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+  +GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALASDGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G++G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 141/281 (50%), Gaps = 17/281 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+LL+  V+     I+ G++H+  +++ G+V  WG+   G+LG   + D V  PK+V 
Sbjct: 83  LIPELLDYVVV----QIACGSRHSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            L    V  ++CG   + ALT  GE+Y+WG N +G   V   +  +H        TL G+
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGI 198

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V+ +ACG  H+ I+S S  +F +G    G LG  +  + S P ++++LR L V+ VACG
Sbjct: 199 PVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACG 258

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
              +  + +            G +FT G    G+LGH  G  ++LP  V  L+     Q 
Sbjct: 259 DEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQV 307

Query: 490 SCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
           +CG   T+ L    G+VY  G    GQLG    K  ++  V
Sbjct: 308 ACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLPQV 348



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 134/279 (48%), Gaps = 18/279 (6%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +T   E+Y WG+ +HG   +G         P ++  T D   + +VACG  HT  +++SG
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSA-IKQVACGHRHTLFLTSSG 59

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +++  G      LGH       +P  +  L    V  +ACG  H+ A+ +          
Sbjct: 60  RVYACGSNDHSQLGHD--LPTKRPLLIPELLDYVVVQIACGSRHSMALSE---------- 107

Query: 449 IGGKLFTWGDADKGRLGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
             G++ +WGD D G+LG   D +   LP  V +LV    VQ +CG   ++ LT  G++Y+
Sbjct: 108 -WGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYS 166

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNA 564
            GS ++GQLG    K+ + +    +L       V  I+ G  H  +++   +V+ WG+N 
Sbjct: 167 WGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNN 226

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GQLGL D   R  PT ++ LR   V  V CG   +  +
Sbjct: 227 CGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFL 265



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 150/337 (44%), Gaps = 30/337 (8%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           +T   E++CWG    G+LG     D  +  P  V       ++ V+CG   T  LT SG 
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 335 IYTWGHNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           +Y  G N+H   G DL  +R       P  + + LD V V ++ACG  H+  +S  GQ+ 
Sbjct: 61  VYACGSNDHSQLGHDLPTKR-------PLLIPELLDYV-VVQIACGSRHSMALSEWGQVL 112

Query: 392 TYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           ++GD   G LG    Q++ Q PK V  L    V  +ACG  H+ A+       C      
Sbjct: 113 SWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS-----C------ 161

Query: 451 GKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           G+L++WG    G+LG V+  +++     P  +T L+       +CG   +  ++    V+
Sbjct: 162 GELYSWGSNIYGQLG-VNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVF 220

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G    GQLG      RS       L+   V+ ++ G      LT+ G V+T G  A G
Sbjct: 221 GWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           QLG G       P  V  L    +  V CG+  T A+
Sbjct: 281 QLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 25/261 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG+   G  +G A D  + Q        LPK++   V   V  I+ G  H+  +T  
Sbjct: 111 VLSWGDNDCG-QLGQATDQDIVQ--------LPKIVRQLVSKTVVQIACGNNHSLALTSC 161

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSC---PKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           GE++ WG    G+LG     +V+    P  +  L GI V +++CG   +  ++KS  ++ 
Sbjct: 162 GELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFG 221

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG NN G   + +  SRS+    K   TL GVR   VACG+  +  ++  G +FT G G 
Sbjct: 222 WGRNNCGQLGLNDETSRSYPTQLKTLRTL-GVRF--VACGDEFSVFLTNEGGVFTCGAGA 278

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           +G LGHG   N   P+ V  L G  +  VACG  HT A+V             G+++ +G
Sbjct: 279 YGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALV----------PSRGRVYGFG 328

Query: 458 DADKGRLGHVDGERKLLPTCV 478
               G+LG    +   LP  V
Sbjct: 329 LGSSGQLGTRSTKSLTLPQVV 349


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 41/371 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE------CLSGINVQ 317
           +  I+ G  H   ++  G+V+   E          NM +  P+LV+       L    + 
Sbjct: 242 IAEIACGGNHILYLSSAGDVYS-SEDHAISTTEPTNM-LQTPQLVKELTLEKALHRRPII 299

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            ++CG   + ALT +GE+Y+WG    G    GE R R+  +PRK+   L   R+  V+CG
Sbjct: 300 HIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRN--VPRKIMALLRH-RIEYVSCG 356

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES--LRGLKVKSVACGPWHTAA 435
             HTA+VS    +FT+G G  G LG G+ +    P+EV +   R  ++  V CG   T A
Sbjct: 357 GSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIA 416

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
           +           ++ G++F+WG   +G+  LG  D + +L P  + +L+D   V  +CG 
Sbjct: 417 L-----------SLEGRVFSWGKQSEGQCGLGFCD-QDELSPCLIEKLLDNRIVDVACGY 464

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLG-------NPKAKDRSITVVEGKLKEEFVKGISSGSY 546
             ++ LT   +V + G   +GQLG       +P++ D+S+   EG   +     I  G++
Sbjct: 465 THSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQR----IYCGAF 520

Query: 547 HVAVLTSGGSV-YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV-CGSSITAAIC 604
           H +++T+G  + Y WG N+ G  GLG +  R+ P   +   +   + V+ CG   T A+ 
Sbjct: 521 H-SIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLCCGHKYTIALE 579

Query: 605 LHKSISVGDQS 615
           + K  SV   S
Sbjct: 580 VDKVPSVSADS 590



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 28/291 (9%)

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
           K   ++ WG         G   + S   P+K+ D L G  ++++ACG  H   +S++G +
Sbjct: 209 KCARVFLWGRPP------GWSHTNSLLTPQKV-DVLPGQSIAEIACGGNHILYLSSAGDV 261

Query: 391 FTYGDGTFGVLGHGN-LQNVSQPKEV---ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           ++  D         N LQ     KE+   ++L    +  +ACG  H+ A+          
Sbjct: 262 YSSEDHAISTTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTS-------- 313

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G++++WG  + GRLGH +   + +P  +  L+       SCG   T  ++    V+
Sbjct: 314 ---AGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVF 370

Query: 507 TMGSAVHGQ--LGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           T G   +G+  LG+ K  D    V   G  K+  +K +   ++ +A L+  G V++WGK 
Sbjct: 371 TFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIA-LSLEGRVFSWGKQ 429

Query: 564 ANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAIC-LHKSISVG 612
           + GQ GLG   Q+  +P  +E L D ++  V CG + + A+   H+ +S G
Sbjct: 430 SEGQCGLGFCDQDELSPCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWG 480



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 2/141 (1%)

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
            +  +CG   +V LT  G+VY+ GS   G+LG+ + +DR++      L    ++ +S G 
Sbjct: 298 IIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGG 357

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA--LRDRQVESVVCGSSITAAI 603
            H AV++    V+T+G+  NG+LGLGD++  +TP  V     R +++  VVCG + T A+
Sbjct: 358 SHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIAL 417

Query: 604 CLHKSISVGDQSSCSQCRMPF 624
            L   +    + S  QC + F
Sbjct: 418 SLEGRVFSWGKQSEGQCGLGF 438



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 21/206 (10%)

Query: 187 LNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGV---LGGDI---GGAVDGS 240
           L   DT+C          PT+G     ++ I+K V  W   +   L G +   G   +G 
Sbjct: 380 LGLGDTKCHDTPQE---VPTWG---FRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQ 433

Query: 241 VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
                   D L P L+E  +   + +++ G  H+  +T + EV  WG G+ G+LG  +  
Sbjct: 434 CGLGFCDQDELSPCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVY 493

Query: 301 DVSCPKLVECL---SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             S   + + L    G + Q + CG F +     S  +Y WG N++GA  +G   +R   
Sbjct: 494 QPSPESIDQSLFACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRD-- 551

Query: 358 LPRK--LFDTLDGVRVSKVACGEWHT 381
           +P +   F  +D   V  + CG  +T
Sbjct: 552 IPERNDFFANIDTDVV--LCCGHKYT 575


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 27/294 (9%)

Query: 319  VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACG 377
            ++CG   T AL ++G IYTWG    G    G   SR H LP  +       + V  VACG
Sbjct: 828  LNCGYGHT-ALIRNGTIYTWGQTVKGCLGQGPTMSR-HSLPSPISLLNCFKLEVLYVACG 885

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            + HT  ++ +G ++ +G   +G LG G++     P+ + SL    V +++CG +HT A+ 
Sbjct: 886  KNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLALT 944

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
            +            G++F WG    G+  LG++D +R  LP CV  L D      + G   
Sbjct: 945  E-----------KGQVFAWGWGVHGQLGLGNIDDQR--LPVCVNHLKDQVIKDIAAGHGH 991

Query: 496  TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV-------KGISSGSYHV 548
            ++ L+  G++++ GS V GQLG       S+ V+   + E+ +         IS G +H 
Sbjct: 992  SLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHS 1051

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            A+LT  G VYTWG++ +GQLG G  +E   PT +      + + + CG   TAA
Sbjct: 1052 ALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINE-NTFKADCISCGCEFTAA 1104



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 23/242 (9%)

Query: 372  SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLR--GLKVKSVAC 428
            S + CG  HTA++  +G ++T+G    G LG G  +   S P  +  L    L+V  VAC
Sbjct: 826  SVLNCGYGHTALIR-NGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVAC 884

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G  HT A+ +              ++ WG +  G+LG  D      P  +T L + + + 
Sbjct: 885  GKNHTTALTN------------NGVYAWGCSKYGQLGLGDVYESPYPRLITSLANENVIT 932

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
             SCG+  T+ LT  G+V+  G  VHGQLG     D+ + V    LK++ +K I++G  H 
Sbjct: 933  LSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHS 992

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV-------ESVVCGSSITA 601
             VL+  G ++++G    GQLG G++ +   P  ++ + ++ +        S+ CG   +A
Sbjct: 993  LVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSA 1052

Query: 602  AI 603
             +
Sbjct: 1053 LL 1054



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 34/316 (10%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPK---LVECLSGINVQSVSCG 322
            ++ G  H AL+ + G ++ WG+   G LG    M   S P    L+ C   + V  V+CG
Sbjct: 828  LNCGYGHTALI-RNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFK-LEVLYVACG 885

Query: 323  EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            +  T ALT +G +Y WG + +G   +G+     +  PR L  +L    V  ++CG++HT 
Sbjct: 886  KNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPY--PR-LITSLANENVITLSCGQFHTL 941

Query: 383  IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
             ++  GQ+F +G G  G LG GN+ +   P  V  L+   +K +A G  H+  + D    
Sbjct: 942  ALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSD---- 997

Query: 443  RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-------TRLVDFDFVQASCGRML 495
                    G++F++G    G+LG  +  +  +P  +         +    F   SCG   
Sbjct: 998  -------KGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHH 1050

Query: 496  TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG--ISSG-SYHVAVLT 552
            +  LT  G VYT G ++ GQLGN   K+        ++ E   K   IS G  +  A   
Sbjct: 1051 SALLTVSGGVYTWGRSLDGQLGNGGHKE---VTAPTQINENTFKADCISCGCEFTAAQEK 1107

Query: 553  SGGSVYTWGKNANGQL 568
              G ++ WG N+ GQ+
Sbjct: 1108 QTGKIFCWGSNSVGQV 1123



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 145/311 (46%), Gaps = 24/311 (7%)

Query: 234  GGAVDGSVSQNKTQVDALLPK--LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
            G  V G + Q  T     LP    L +   L+V  ++ G  H   +T  G V+ WG  K 
Sbjct: 847  GQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKY 905

Query: 292  GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            G+LG     +   P+L+  L+  NV ++SCG+F T ALT+ G+++ WG   HG   +G  
Sbjct: 906  GQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQ--LGLG 963

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                  LP  +    D V +  +A G  H+ ++S  GQ+F++G G FG LG GN    S 
Sbjct: 964  NIDDQRLPVCVNHLKDQV-IKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSV 1022

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA---IGGKLFTWGDADKGRLGHVD 468
            P  ++ +   K+  +A G +H+ +        C  +A   + G ++TWG +  G+LG+  
Sbjct: 1023 PVLIQGISE-KIILIATGYFHSISC------GCHHSALLTVSGGVYTWGRSLDGQLGNGG 1075

Query: 469  GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG-LGKVYTMGSAVHGQ-----LGNPKAK 522
             +    PT +     F     SCG   T       GK++  GS   GQ     L  P  K
Sbjct: 1076 HKEVTAPTQINE-NTFKADCISCGCEFTAAQEKQTGKIFCWGSNSVGQVRVTNLAIP-VK 1133

Query: 523  DRSITVVEGKL 533
            + +   ++GKL
Sbjct: 1134 ESATKSLDGKL 1144


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 162/325 (49%), Gaps = 32/325 (9%)

Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
           KLLE+   LD  +I+ G     +V++ G +F  G+G  G LG     DV+ P+ +  L  
Sbjct: 152 KLLEN---LDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLP 208

Query: 314 INVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           + V +V+   G     ALT  G++Y+WG  + G   +G   +  +  P  L D L    V
Sbjct: 209 VMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQ--LGHGNTLGYLDP-TLIDELKSKEV 265

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACG 429
           +K+ACG  H+  V + G++F++GDG+ G LGHGN  N++Q  PK++ SL G  + +VACG
Sbjct: 266 TKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGN--NLAQLLPKKIMSLNGKHIMAVACG 323

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQ 488
             +T A+             G  +++WG    G LG+ V+     +PT +  L       
Sbjct: 324 ECYTIAVA------------GDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITN 371

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQ--LGNPK--AKDRSITVVEGKLKEEFVKGISSG 544
            +CG   +  ++  GKV+  GS    +  LGN K   K R I   +G LK + +K + + 
Sbjct: 372 VACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREI---QGDLKGKKIKRVVAS 428

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLG 569
            +H   +   G VY WG    G +G
Sbjct: 429 LFHALAIDENGQVYIWGSQEIGPVG 453



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 22/295 (7%)

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           GI+V+      ++   +  S E+Y WG   +   L  + ++       KL + LD    S
Sbjct: 106 GIDVEKSRTDPYKEMRVEPS-EVYVWGSKRN-LLLAADEKNPLEPDKSKLLENLD---PS 160

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW- 431
            +ACG     +VS +G +F  G G  G LG GN  +V+ P+++  L  + V +VA  P  
Sbjct: 161 DIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGG 220

Query: 432 -HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            H  A+              GK+++WG  D+G+LGH +    L PT +  L   +  + +
Sbjct: 221 RHAMAL-----------TAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIA 269

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS-YHVA 549
           CG M ++ +   GK+++ G   +G LG+     + +      L  + +  ++ G  Y +A
Sbjct: 270 CGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIA 329

Query: 550 VLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           V  +G  V++WG   NG+LG G +      PT +EAL  + + +V CG + + A+
Sbjct: 330 V--AGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAV 382



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 117/217 (53%), Gaps = 15/217 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L P L++     +V  I+ GA H+  V  +G++F WG+G +G LGH  N+    PK +  
Sbjct: 252 LDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMS 311

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+G ++ +V+CGE  T A+    ++++WG   +G    G     S+++P K+ + L    
Sbjct: 312 LNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGYGVEMP-SYYMPTKI-EALFFKG 368

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACG 429
           ++ VACG   +  VS +G+++ +G G    LG GN + + +P+E++  L+G K+K V   
Sbjct: 369 ITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVAS 428

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
            +H  AI +            G+++ WG  + G +G+
Sbjct: 429 LFHALAIDE-----------NGQVYIWGSQEIGPVGN 454



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +++ WG + +  L   D +  L P     L + D    +CG      ++  G ++  G  
Sbjct: 126 EVYVWG-SKRNLLLAADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKG 184

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVK--GISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
             G LG     D ++     +L    V    I  G  H   LT+ G VY+WG    GQLG
Sbjct: 185 HMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLG 244

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH-KSISVGDQSS 616
            G++     PT ++ L+ ++V  + CG+  + A+    K  S GD S+
Sbjct: 245 HGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSN 292



 Score = 47.8 bits (112), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV  WG G   G++G  V+       T+++AL  K         + N++ G   +  V+ 
Sbjct: 334 DVWSWGLGG-NGELGYGVEMPSYYMPTKIEALFFK--------GITNVACGYATSFAVSA 384

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LSGINVQSVSCGEFQTCALTKSGEIYTW 338
            G+V+ WG G   RLG      +  P+ ++  L G  ++ V    F   A+ ++G++Y W
Sbjct: 385 NGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIW 444

Query: 339 GHNNHG 344
           G    G
Sbjct: 445 GSQEIG 450


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 27/321 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++ LGA H  +++ +G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTAP-QIVEHLAGIPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG  + ++   P  +E+L   KV+ +ACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G LFT+G    G+LGH   + +L P  V  L      Q +CG
Sbjct: 255 TALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ I +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIM 363

Query: 552 TSG--GSVYTWGKNANGQLGL 570
            +G   S+  W K  N  + L
Sbjct: 364 IAGENQSILLWIKKENSYVNL 384



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC 428
           ++ ++ CG++H+  +S  G+LF +G    G LG G    + + P+ VE L G+ +  ++ 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISA 198

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  H+ A+           ++ G +++WG  + G+LG    E K  P+ +  L +     
Sbjct: 199 GEAHSMAL-----------SMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEF 247

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH- 547
            +CG   T  LT  G ++T G+  HGQLG+   ++     +  +L    V  I+ G +H 
Sbjct: 248 LACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHT 307

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           +A ++  G V+++G    GQLG G ++++  P
Sbjct: 308 LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  +  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSMDLGADHMLILSSDGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTAPQIVEHLAGI 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G +Y+ G    GQLG  + ++KD S +++E  L  + V+ ++
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKD-SPSLIEA-LDNQKVEFLA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 26/246 (10%)

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL---QNVSQPKEVESL 418
           LF +  G+R + +   E    I  +SG+L     G  GV  H  L     +  PK ++  
Sbjct: 35  LFPSTAGLRRALLRSVEATRQICCSSGRLAFLERGGAGVQVHQLLPGSDGLRTPKCIKLG 94

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
           + +K+ S+  G  H   +           +  GK F +   D   + H+  E        
Sbjct: 95  KNMKIHSMDLGADHMLIL-----------SSDGKPFEY---DNYSMKHLRFE-------- 132

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEF 537
           + L +   +Q +CG   ++ L+  G+++  G  +HGQLG   K    +   +   L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIP 192

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           +  IS+G  H   L+  G++Y+WGKN  GQLGL  ++ +++P+ +EAL +++VE + CG 
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGG 252

Query: 598 SITAAI 603
           S TA +
Sbjct: 253 SHTALL 258


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 19/324 (5%)

Query: 283 VFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           + CWG  +DG+LG  V  + V  P++    SG  ++ V+CG   T  L + G +YT G N
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           + G   +G  ++ +     +L   LD  +++ V+CG  H+  V+  GQ+F +G G  G L
Sbjct: 61  SCGQ--LGHDKAGN---SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQL 115

Query: 402 GHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G    +  V  P+ ++ L    +  V CG  H           C + +  G+LFTWG   
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQH-----------CIALSRDGQLFTWGQNS 164

Query: 461 KGRLGHVDGER-KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            G+LG   GE  KL P+ V  L      Q + G      L+  G V+  G    GQLG  
Sbjct: 165 SGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLN 224

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
             +DR++      L+ + V  IS G  H A LT  G ++T+G  + GQLG G S     P
Sbjct: 225 DKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLP 284

Query: 580 TFVEALRDRQVESVVCGSSITAAI 603
             V  L   +V  + CG   T A 
Sbjct: 285 RRVMELMGTEVSQITCGRHHTLAF 308



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 133/267 (49%), Gaps = 18/267 (6%)

Query: 262 LDVQNISL---GAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQ 317
           LD Q I++   G  H+  V ++G+VF WG G  G+LG       V  P+L++ L   ++ 
Sbjct: 80  LDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSIS 139

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            V CG     AL++ G+++TWG N+ G   +G  +  +  L      +L G+ ++++  G
Sbjct: 140 QVVCGNQHCIALSRDGQLFTWGQNSSGQ--LGLGKGETSKLSPSPVKSLAGIPLAQITAG 197

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             H   +S SG +F +G    G LG  + Q+ + P  ++ LR  +V  ++CG  HTAA+ 
Sbjct: 198 GDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALT 257

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                        G LFT+GD  +G+LGH     +LLP  V  L+  +  Q +CGR  T+
Sbjct: 258 K-----------SGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTL 306

Query: 498 GLT-GLGKVYTMGSAVHGQLGNPKAKD 523
                 G VY  G   HGQLG     D
Sbjct: 307 AFVPSSGTVYAFGCNSHGQLGTGILAD 333



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 153/318 (48%), Gaps = 17/318 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G +H   + ++G V+  G    G+LGH  +   + P+LV  L    +  VSCG 
Sbjct: 35  LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGH--DKAGNSPELVGALDTQKITMVSCGR 92

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A+ + G+++ WG  + G  L  E    +  +PR L    D   +S+V CG  H   
Sbjct: 93  AHSVAVNEQGQVFVWGAGD-GGQLGLETAETAVRIPRLLKKLCDH-SISQVVCGNQHCIA 150

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +S  GQLFT+G  + G LG G  +     P  V+SL G+ +  +  G            D
Sbjct: 151 LSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGG-----------D 199

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
            C + ++ G +F WG    G+LG  D + + +P  +  L     V  SCG   T  LT  
Sbjct: 200 HCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKS 259

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G ++T G    GQLG+  + +  +     +L    V  I+ G +H +A + S G+VY +G
Sbjct: 260 GGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319

Query: 562 KNANGQLGLGDSQERETP 579
            N++GQLG G   +  +P
Sbjct: 320 CNSHGQLGTGILADLRSP 337



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 23/246 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V +WG G      GG +    ++   ++  LL KL + ++      +  G +H   ++++
Sbjct: 104 VFVWGAG-----DGGQLGLETAETAVRIPRLLKKLCDHSI----SQVVCGNQHCIALSRD 154

Query: 281 GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G++F WG+   G+LG  K       P  V+ L+GI +  ++ G     AL+ SG ++ WG
Sbjct: 155 GQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWG 214

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   + +++ R+  +P  +   L   RV  ++CG+ HTA ++ SG LFT+GDG+ G
Sbjct: 215 KNKAGQLGLNDKQDRA--VPCHI-KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRG 271

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHG+  N   P+ V  L G +V  + CG  HT A V             G ++ +G  
Sbjct: 272 QLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFV----------PSSGTVYAFGCN 321

Query: 460 DKGRLG 465
             G+LG
Sbjct: 322 SHGQLG 327



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 11/153 (7%)

Query: 453 LFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +  WG+A  G+LG  V+G     P            + +CG   T+ L   G VYT GS 
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG+ KA +    V  G L  + +  +S G  H   +   G V+ WG    GQLGL 
Sbjct: 61  SCGQLGHDKAGNSPELV--GALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGL- 117

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             +  ET     A+R  ++   +C  SI+  +C
Sbjct: 118 --ETAET-----AVRIPRLLKKLCDHSISQVVC 143


>gi|449476265|ref|XP_004154689.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 171

 Score =  136 bits (343), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 25/177 (14%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           E F WGE   GRLGH    D   PKL++ LS + V+ V+CGE  TCA+T S ++YTWG  
Sbjct: 12  EFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDLYTWGDG 71

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
            + + ++G     SHW+PR++                  TA+V  +G+LF     TFG L
Sbjct: 72  TYNS-VLGHGNDASHWIPRRV------------------TALVICAGKLF-----TFGAL 107

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK-SNAIGGKLFTWG 457
           GH +  ++S  KEVESL+GL+    ACG WHT A++++++     +N   GKLFTWG
Sbjct: 108 GHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNSLGKLFTWG 164



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 56/198 (28%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +V    + F++G+   G LGHG   +   PK +++L  LKV+ VACG  HT A+      
Sbjct: 6   VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAV------ 59

Query: 443 RCKSNAIGGKLFTWGDAD-KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +   L+TWGD      LGH +     +P  VT LV        C          
Sbjct: 60  -----TLSNDLYTWGDGTYNSVLGHGNDASHWIPRRVTALV-------ICA--------- 98

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-----GSYH-VAVL---- 551
            GK++T G+  H        KDR    +  ++  E +KG+ +     G +H +AVL    
Sbjct: 99  -GKLFTFGALGH--------KDRDSISISKEV--ESLKGLRTARAACGVWHTIAVLEVII 147

Query: 552 -------TSGGSVYTWGK 562
                   S G ++TWG+
Sbjct: 148 GNPNWNNNSLGKLFTWGR 165



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 48/184 (26%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE   GG +G         +  + DA  PKL+++   L V+ ++ G  H   VT   ++
Sbjct: 16  WGEE-YGGRLG---------HGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDL 65

Query: 284 FCWGEGK-DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           + WG+G  +  LGH  +     P+ V  L       V C          +G+++T+G   
Sbjct: 66  YTWGDGTYNSVLGHGNDASHWIPRRVTAL-------VIC----------AGKLFTFGALG 108

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV------------STSGQL 390
           H        + R      K  ++L G+R ++ ACG WHT  V            ++ G+L
Sbjct: 109 H--------KDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNSLGKL 160

Query: 391 FTYG 394
           FT+G
Sbjct: 161 FTWG 164



 Score = 40.0 bits (92), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           ++WG+   G+LG G   +   P  ++AL + +VE V CG   T A+ L   +
Sbjct: 14  FSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDL 65


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 170/386 (44%), Gaps = 37/386 (9%)

Query: 221 VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           VM WG    G LG       DG+ +   T V         S +   V  I+ G  H   +
Sbjct: 292 VMCWGANWSGQLG-------DGTTTARSTPV-------AVSGLASGVTAIAAGDSHTCAL 337

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G V+CWG    G+LG     D S P  V  L G  V +++ G+F TCAL  SG +  
Sbjct: 338 TSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGDFHTCALMSSGGVRC 396

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N  G    G   +RS   P  +   + GV  + +A G+ HT   ++SG +  +GD  
Sbjct: 397 WGRNKDGQLGDGTTTTRS--TPVAVSGLVSGV--TAIAAGDDHTCARTSSGGVMCWGDNW 452

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LG G   + S P  V  L G  V ++A G  HT A++             G ++ WG
Sbjct: 453 SGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSS-----------GGVWCWG 500

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG      +  P  V+ L   +    + G + T  LT  G V   G+   GQLG
Sbjct: 501 RNSSGQLGDGTTTDRGTPVAVSGLPS-EVTAIASGGVHTCALTSSGGVMCWGANWSGQLG 559

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
           +     RS  V    L    V  I++G  H   LTS G V+ WG N++GQLG G +  R 
Sbjct: 560 DGTTTARSTPVAVSGLPSG-VMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARS 618

Query: 578 TPTFVEALRDRQVESVVCGSSITAAI 603
           TP  V  L    V ++  GS  T A+
Sbjct: 619 TPVAVSGL-PSGVTAIAAGSFHTCAL 643



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 151/355 (42%), Gaps = 36/355 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +T  G V CWG    G+LG     D S P  V  L+   V +++ G 
Sbjct: 69  VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLT-SGVTAIAAGY 127

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             TCAL  SG +  WG N  G    G    RS   P  +     G  V+ +A G+ HT  
Sbjct: 128 AHTCALMSSGGVMCWGDNWSGQLGDGTTTDRS--TPVAVSGLASG--VTAIAAGDDHTCA 183

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            ++SG +  +GD   G LG G   + S P  V  L G  V ++A G  HT A++      
Sbjct: 184 RTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSS---- 238

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++ WGD   G+LG      +  P  V+ L        + G   T   T  G
Sbjct: 239 -------GGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTSSG 290

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V   G+   GQLG+     RS  V    L    V  I++G  H   LTS G V+ WG N
Sbjct: 291 GVMCWGANWSGQLGDGTTTARSTPVAVSGLASG-VTAIAAGDSHTCALTSSGGVWCWGYN 349

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
             GQLG G + +R TP  V  L          GS +TA       I+ GD  +C+
Sbjct: 350 FFGQLGDGTTTDRSTPVAVSGL----------GSGVTA-------IAAGDFHTCA 387



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 155/365 (42%), Gaps = 30/365 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           VM WG    G  +G   DG+ +   T V         S +   V  I+ G  H   +   
Sbjct: 88  VMCWGRNGFG-QLG---DGTTTDRSTPV-------AVSGLTSGVTAIAAGYAHTCALMSS 136

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V CWG+   G+LG     D S P  V  L+   V +++ G+  TCA T SG +  WG 
Sbjct: 137 GGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLA-SGVTAIAAGDDHTCARTSSGGVMCWGD 195

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G    G    RS   P  +     G  V+ +A G  HT  + +SG ++ +GD   G 
Sbjct: 196 NWSGQLGDGTTTDRS--TPVAVSGL--GSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQ 251

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G   + S P  V  L    V ++A G +HT A       R  S    G +  WG   
Sbjct: 252 LGDGTTTDRSTPVAVSGLA-SGVTAIAAGGFHTCA-------RTSS----GGVMCWGANW 299

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG      +  P  V+ L        + G   T  LT  G V+  G    GQLG+  
Sbjct: 300 SGQLGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGT 358

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
             DRS  V    L    V  I++G +H   L S G V  WG+N +GQLG G +  R TP 
Sbjct: 359 TTDRSTPVAVSGLGSG-VTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPV 417

Query: 581 FVEAL 585
            V  L
Sbjct: 418 AVSGL 422



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 169/435 (38%), Gaps = 84/435 (19%)

Query: 221 VMIWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           VM WG+   G LG       DG+ +   T V         S +   V  I+ G  H    
Sbjct: 139 VMCWGDNWSGQLG-------DGTTTDRSTPV-------AVSGLASGVTAIAAGDDHTCAR 184

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G V CWG+   G+LG     D S P  V  L G  V +++ G   TCAL  SG ++ 
Sbjct: 185 TSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSSGGVWC 243

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR--------------------------- 370
           WG N  G    G    RS   P  +     GV                            
Sbjct: 244 WGDNWSGQLGDGTTTDRS--TPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSG 301

Query: 371 ----------------------VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
                                 V+ +A G+ HT  +++SG ++ +G   FG LG G   +
Sbjct: 302 QLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTD 361

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
            S P  V  L G  V ++A G +HT A++     RC           WG    G+LG   
Sbjct: 362 RSTPVAVSGL-GSGVTAIAAGDFHTCALMSSGGVRC-----------WGRNKDGQLGDGT 409

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
              +  P  V+ LV       + G   T   T  G V   G    GQLG+    DRS  V
Sbjct: 410 TTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPV 468

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
               L    V  I++G  H   L S G V+ WG+N++GQLG G + +R TP  V  L   
Sbjct: 469 AVSGLGSG-VTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGL-PS 526

Query: 589 QVESVVCGSSITAAI 603
           +V ++  G   T A+
Sbjct: 527 EVTAIASGGVHTCAL 541



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 137/328 (41%), Gaps = 19/328 (5%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ 317
           S ++  V  I+ G  H    T  G V CWG+   G+LG     D S P  V  L G  V 
Sbjct: 420 SGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL-GSGVT 478

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +++ G   TCAL  SG ++ WG N+ G   +G+  +     P  +        V+ +A G
Sbjct: 479 AIAAGGSHTCALMSSGGVWCWGRNSSGQ--LGDGTTTDRGTPVAVSGLPS--EVTAIASG 534

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             HT  +++SG +  +G    G LG G     S P  V  L    V ++A G  HT A+ 
Sbjct: 535 GVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLP-SGVMAIAAGDLHTCALT 593

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                        G ++ WG    G+LG      +  P  V+ L        + G   T 
Sbjct: 594 SS-----------GGVWCWGANSSGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGSFHTC 641

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            LT  G V+  G+   GQLG+    D S  V    L    V  I++G +H    T  G V
Sbjct: 642 ALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLPSG-VTAIAAGRFHTCARTGSGGV 700

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEAL 585
           + W  N  GQLG G   +  TP  V  L
Sbjct: 701 WCWASNRYGQLGDGSYTDSSTPVAVSGL 728



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 148/354 (41%), Gaps = 36/354 (10%)

Query: 221 VMIWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           VM WG+   G LG       DG+ +   T V         S +   V  I+ G  H   +
Sbjct: 445 VMCWGDNWSGQLG-------DGTTTDRSTPV-------AVSGLGSGVTAIAAGGSHTCAL 490

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
              G V+CWG    G+LG     D   P  V  L    V +++ G   TCALT SG +  
Sbjct: 491 MSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLP-SEVTAIASGGVHTCALTSSGGVMC 549

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N  G    G   +RS   P  +     GV    +A G+ HT  +++SG ++ +G  +
Sbjct: 550 WGANWSGQLGDGTTTARS--TPVAVSGLPSGVM--AIAAGDLHTCALTSSGGVWCWGANS 605

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LG G     S P  V  L    V ++A G +HT A+              G ++ WG
Sbjct: 606 SGQLGDGTTTARSTPVAVSGLP-SGVTAIAAGSFHTCALTSS-----------GGVWCWG 653

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG         P  V+ L        + GR  T   TG G V+   S  +GQLG
Sbjct: 654 ANWSGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGRFHTCARTGSGGVWCWASNRYGQLG 712

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           +    D S  V    L    V  I++G  H    TS G V  WG N++GQLG G
Sbjct: 713 DGSYTDSSTPVAVSGLVSG-VTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDG 765



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 96/223 (43%), Gaps = 16/223 (7%)

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
           F  L GV  + +A G  HT  +++SG +  +G   FG LG G   + S P  V  L    
Sbjct: 63  FSPLQGV--TAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLT-SG 119

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V ++A G  HT A++             G +  WGD   G+LG      +  P  V+ L 
Sbjct: 120 VTAIAAGYAHTCALMSS-----------GGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLA 168

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
                  + G   T   T  G V   G    GQLG+    DRS  V    L    V  I+
Sbjct: 169 S-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG-VTAIA 226

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           +G  H   L S G V+ WG N +GQLG G + +R TP  V  L
Sbjct: 227 AGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGL 269


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 162/342 (47%), Gaps = 28/342 (8%)

Query: 233 IGGAVDGSVSQNKTQVDALLP--KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           +GG   G +        + LP     + A    +  +  G +H   +T +G+V  +G G 
Sbjct: 13  VGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGV 72

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            G+LG       S P+ V  LSG  V  ++ G   + ALT+SG++Y +G N  G   +G 
Sbjct: 73  KGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGH 132

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG---DGTFGVLGHGNLQ 407
             +     P+K+   L   +++++ACG+ HTA++++SG+LF +G   DG  GV GH N  
Sbjct: 133 NFTAKEQTPQKV-PPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEG 191

Query: 408 N---VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
                S P+ V  L+G  V  + CG  HT A+           A GG ++ WG+  +G+L
Sbjct: 192 PPIVASAPQLVTGLKGKHVVQIGCGLQHTVAL----------TAAGG-VYCWGENGRGQL 240

Query: 465 GHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           G  D + +  P+ V + L  F  +  +CG   T+ +T    VY  GS  HGQLG  +   
Sbjct: 241 GTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGR--- 297

Query: 524 RSITVVEG----KLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           R + V       +L    VK    G++H  + T  G  Y  G
Sbjct: 298 RGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 140/313 (44%), Gaps = 36/313 (11%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLP-RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++  G N+ G  L     ++S +LP R  F      R+++V CG  HT  +++ G +  +
Sbjct: 10  VWAVGGNSKG-QLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGF 68

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G+G  G LG GN  + S P+ V  L G  V  +A G  H+ A+ +            G L
Sbjct: 69  GNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTE-----------SGDL 117

Query: 454 FTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           + +GD   G+LG  H    ++  P  V  L      Q +CG+  T  LT  G+++  G+ 
Sbjct: 118 YAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNN 177

Query: 512 VHGQLG-------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
             G LG        P     +  +V G LK + V  I  G  H   LT+ G VY WG+N 
Sbjct: 178 RDGALGVAGHANEGPPIVASAPQLVTG-LKGKHVVQIGCGLQHTVALTAAGGVYCWGENG 236

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPF 624
            GQLG GD+Q R TP            S+VC   ++A  C+H +       + + C   +
Sbjct: 237 RGQLGTGDTQNRYTP------------SLVC-KPLSAFKCIHVACGGQHTIAVTDCDDVY 283

Query: 625 GFRRKKHNCYNCG 637
           GF   +H     G
Sbjct: 284 GFGSDRHGQLGLG 296


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 122/214 (57%), Gaps = 14/214 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC 321
           ++  I+ G  H+  ++K GE+F WG+  DG+LG  ++    S P++VE LSG+ +  +S 
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           GE  + AL+ SG +Y+WG N+ G   +G   ++         + LD  +V  +ACG  HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDS---PSCIEALDDQKVEFLACGGSHT 269

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A+++ SG +FT+GDG +G LGH + QN  +P  V  L G +V  +ACG  HT A V  M 
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDM- 328

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                    GK+F++G   +G+LG+     +L+P
Sbjct: 329 ---------GKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 13/211 (6%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACG 429
           + ++ CG++H+  +S  G+LF +G    G LG G +  + S P+ VE+L G+ +  ++ G
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 213

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             H+ A+           ++ G +++WG  D G+LG      K  P+C+  L D      
Sbjct: 214 EAHSMAL-----------SMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFL 262

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           +CG   T  LT  G V+T G   +GQLG+   ++     +   L    V  I+ G  H +
Sbjct: 263 ACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTL 322

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           A ++  G V+++G    GQLG G +  +  P
Sbjct: 323 AYVSDMGKVFSFGSGKEGQLGNGGTCNQLMP 353



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  +DG +   +       P+++E+   + +  IS G  H+  ++  G V+ W
Sbjct: 170 GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSW 229

Query: 287 GEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
           G    G+LG  H  N D   P  +E L    V+ ++CG   T  LTKSG ++T+G   +G
Sbjct: 230 GRNDCGQLGLGHTYNKD--SPSCIEALDDQKVEFLACGGSHTALLTKSGLVFTFGDGKYG 287

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGH 403
              +G   +++   P  L   L G RV+++ACG  HT A VS  G++F++G G  G LG+
Sbjct: 288 Q--LGHNSTQNELRP-CLVAGLVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGN 344

Query: 404 GNLQNVSQPKEVE 416
           G   N   P+ ++
Sbjct: 345 GGTCNQLMPRPMK 357



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 26/236 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  +  GE H  ++S+ G+ F Y       + H   Q + Q K         +  + C
Sbjct: 112 MKIHSMDQGEEHMLVLSSDGKPFEYKYS----IEHARFQCILQEK--------NIIQITC 159

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG   +       P  V  L     
Sbjct: 160 GDYHSLAL-----------SKGGELFAWGQNLDGQLGVGRIFASTST-PEIVENLSGVPL 207

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G   ++ L+  G VY+ G    GQLG     ++        L ++ V+ ++ G  
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGS 267

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           H A+LT  G V+T+G    GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLA 323



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 3/121 (2%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGIS 542
           + +Q +CG   ++ L+  G+++  G  + GQLG  +  A   +  +VE       V+ IS
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQ-IS 211

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +G  H   L+  G+VY+WG+N  GQLGLG +  +++P+ +EAL D++VE + CG S TA 
Sbjct: 212 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGSHTAL 271

Query: 603 I 603
           +
Sbjct: 272 L 272


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 94

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 95  SHSLALSDQGQLFSWGAGSDGQ--LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G    G LG G    + + P+ V+SL G+ +  VA G  H+ A+      
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL------ 206

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D   +  P  V  L     V  SCG   T  LT  
Sbjct: 207 -----SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKS 261

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 262 GGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 322 CGARGQLGTGHTCNVKCPSPVKG 344



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 147/326 (45%), Gaps = 21/326 (6%)

Query: 283 VFCWGE---GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           + CWG    G  G +   +   V+ P+    +S  +++ V+CG   +  L + GE+YT G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G
Sbjct: 61  SNTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDG 115

Query: 400 VLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LGH   ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG 
Sbjct: 116 QLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWH-----------CMALAADGQFFTWGQ 164

Query: 459 ADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG
Sbjct: 165 NRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLG 224

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +  
Sbjct: 225 LSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV 284

Query: 578 TPTFVEALRDRQVESVVCGSSITAAI 603
            P  V  L   +V  + CG   T A 
Sbjct: 285 NPRRVLELMGSEVTQIACGRQHTLAF 310



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+ + G+
Sbjct: 110 GAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQ 169

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 170 LGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDET 229

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+FG LGH ++ +   P
Sbjct: 230 DRQSPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNP 286

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 287 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 329


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 141/275 (51%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+L +  V+     IS G++H+  +++ G+V  WG+   G+LGH  + + V  PK+V 
Sbjct: 83  LIPELQDYVVI----QISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V   +  +H   P +L  TL G
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRL-TTLLG 197

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N + P ++++LR L V+ VAC
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVAC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 258 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+ L    G+VY  G    GQLG    K
Sbjct: 307 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 158/323 (48%), Gaps = 19/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           VQ ++ G +H   +T  G+V+  G     +LGH+  +    P L+  L    V  +SCG 
Sbjct: 42  VQQVACGHRHTLFLTANGKVYACGSNDHSQLGHE--LPTKRPLLIPELQDYVVIQISCGS 99

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL++ G++ +WG N+ G   +G    +      K+   L    V ++ACG  H+  
Sbjct: 100 RHSLALSEWGQVLSWGDNDCGQ--LGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 384 VSTSGQLFTYGDGTFGVLGHG---NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +++ G+L+++G   +G LG     +L + + P  + +L G+ + ++ACG  H+  I    
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI---- 213

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  +  G +F WG  + G+LG  D   +  PT +  L        +CG   +V LT
Sbjct: 214 -------SKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G VY 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 560 WGKNANGQLGLGDSQERETPTFV 582
           +G  ++GQLG   ++    P  V
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 146/332 (43%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       VQ V+CG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 340 HNNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N+H            H LP K   L   L    V +++CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDHS--------QLGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+       C      G+L++
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS-----C------GELYS 166

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+  + L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 167 WGSNIYGQLG-VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +R+       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 226 NCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 448 AIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+  LG ++ E+ L P+ +    D    Q +CG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKV 61

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  H QLG+     R + + E  L++  V  IS GS H   L+  G V +WG N  
Sbjct: 62  YACGSNDHSQLGHELPTKRPLLIPE--LQDYVVIQISCGSRHSLALSEWGQVLSWGDNDC 119

Query: 566 GQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG   D +  + P  V  L  + V  + CG++ + A+
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH    + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--GREGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G +  + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 147/307 (47%), Gaps = 30/307 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
           + +++ G  H+  ++  G++F WG G DG+LG     D V+ P+L++ L+   +  VSCG
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            +   AL   G+ +TWG N+HG   +G +   S   P+++  +L+G+ +++VA G  H+ 
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLG-KDFPSQASPQRV-RSLEGIPLAQVAAGGAHSF 203

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S SG +F +G    G LG  + ++   P  V+ LR  KV  ++CG  HTA +      
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---- 259

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-G 501
                   G +FT+G    G+LGH     ++ P  V  L+  +  Q +CGR  T+     
Sbjct: 260 -------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312

Query: 502 LGKVYTMGSAVHGQLG-----NPK----------AKDRSITVVEGKLKEEFVKGISSGSY 546
            G +Y  G    GQLG     N K          A    ++    + K   VK I SG  
Sbjct: 313 SGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHRGQLSATADRFKYHIVKQIFSGGD 372

Query: 547 HVAVLTS 553
              VL S
Sbjct: 373 QTFVLCS 379



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHGREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   D   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGHG   N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG   +    + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 169 LGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 165/340 (48%), Gaps = 27/340 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+   GE+   G+   G+LG K       PK +  L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   VGE +   + +P K+  TL G+++ +V+CG +H+  +S  GQ
Sbjct: 91  CYKGRVFAWGAGSEGQLGVGEFK-EINLIPTKI-KTLTGIKIIQVSCGHYHSLALSEGGQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL---PTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG  + G+L        +    P  +  L +   +  SCG   T  LT  GKV
Sbjct: 198 LSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKV 257

Query: 506 YTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKN 563
           +T G   +GQLG+ P A+     +VEG   +  V  I  GSYH +A + + G V ++G+ 
Sbjct: 258 FTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVSFGRG 315

Query: 564 ANGQ------LGLGDSQERETPTFVEALRDRQVESVVCGS 597
            + +        L ++ +  +P     L D QV+ +  G+
Sbjct: 316 PSCKSSPTHPKALTENVDFTSPISANDLVDFQVKHIFAGT 355



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 157/317 (49%), Gaps = 30/317 (9%)

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +G  ++  + GE  +  L  +GE+++ G N+ G   +G +  +    P+++  TLD +RV
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNSQGQ--LGRKGVQRDEHPKRI-RTLDNLRV 77

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGP 430
             V+CG+ H+  V   G++F +G G+ G LG G  + ++  P ++++L G+K+  V+CG 
Sbjct: 78  DLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGH 137

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQA 489
           +H+ A+ +           GG++F+WG    G+LG   +   +  P  V  L      Q 
Sbjct: 138 YHSLALSE-----------GGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQV 186

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-------AKDRSITVVEGKLKEEFVKGIS 542
           + G   +  L+  G  +  GS   GQL   +        K RSI    G LK   V  IS
Sbjct: 187 AAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSI----GALKNLGVIYIS 242

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H AVLT  G V+T+G N+ GQLG   + E+E P  VE + D  V  + CGS  T A
Sbjct: 243 CGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGI-DGLVSQIDCGSYHTLA 301

Query: 603 ICLH--KSISVGDQSSC 617
                 K +S G   SC
Sbjct: 302 YVYTTGKVVSFGRGPSC 318



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 135/267 (50%), Gaps = 29/267 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNMDVSCPKLV 308
           PK + +   L V  +S G +H+  V  +G VF WG G +G+LG     ++N+    P  +
Sbjct: 66  PKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINL---IPTKI 122

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           + L+GI +  VSCG + + AL++ G++++WG N+HG   +G +   S   P+++  +LDG
Sbjct: 123 KTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLG-KECPSQASPQRV-RSLDG 180

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG--HGNLQNVS-QPKEVESLRGLKVKS 425
           + +++VA G  H+  +S SG  F +G    G L     N+   S +P+ + +L+ L V  
Sbjct: 181 IPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIY 240

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           ++CG  HTA +              GK+FT+G    G+LGH     K  P  V   +D  
Sbjct: 241 ISCGYEHTAVLTQT-----------GKVFTFGGNSYGQLGHSPTAEKEGPQLVEG-IDGL 288

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAV 512
             Q  CG   T     L  VYT G  V
Sbjct: 289 VSQIDCGSYHT-----LAYVYTTGKVV 310



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 28/256 (10%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           PR+      G  + + A GE H+ ++ ++G+L + GD + G LG   +Q    PK + +L
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLP 475
             L+V  V+CG  H+ A+              G++F WG   +G+LG   GE K   L+P
Sbjct: 73  DNLRVDLVSCGKEHSLAV-----------CYKGRVFAWGAGSEGQLG--VGEFKEINLIP 119

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVE 530
           T +  L     +Q SCG   ++ L+  G+V++ GS  HGQLG  K     A  + +  ++
Sbjct: 120 TKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLD 179

Query: 531 GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRD 587
           G      +  +++G  H   L+  G+ + WG N  GQL L  +    +   P  + AL++
Sbjct: 180 GIP----LTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKN 235

Query: 588 RQVESVVCGSSITAAI 603
             V  + CG   TA +
Sbjct: 236 LGVIYISCGYEHTAVL 251



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 15/220 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G          +G +   + +   L+P  +++   + +  +S G  H+  +++ 
Sbjct: 96  VFAWGAGS---------EGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEG 146

Query: 281 GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G+VF WG    G+LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG
Sbjct: 147 GQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWG 206

Query: 340 HNNHGADLVGERR--SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
            NN G   + +     +SH  PR +   L  + V  ++CG  HTA+++ +G++FT+G  +
Sbjct: 207 SNNAGQLALRQNNVPVQSH-KPRSI-GALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNS 264

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           +G LGH        P+ VE + GL V  + CG +HT A V
Sbjct: 265 YGQLGHSPTAEKEGPQLVEGIDGL-VSQIDCGSYHTLAYV 303



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)

Query: 194 CPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDG---------SVSQN 244
           CP   S + V    G PL +       V   G       + GA  G         ++ QN
Sbjct: 166 CPSQASPQRVRSLDGIPLTQ-------VAAGGAHSFALSLSGASFGWGSNNAGQLALRQN 218

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
              V +  P+ + +   L V  IS G +H A++T+ G+VF +G    G+LGH    +   
Sbjct: 219 NVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEG 278

Query: 305 PKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
           P+LVE + G+ V  + CG + T A +  +G++ ++G
Sbjct: 279 PQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFG 313


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  136 bits (342), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 224 WGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
           WG  V G   +GG  D ++         L+P+ L+      V+ I+ G  H  L+TK+GE
Sbjct: 31  WGSTVYGELGLGGIEDENI---------LMPRELDFQKATAVEQIACGETHTVLITKDGE 81

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           VF  G    G+LGH+        +++  L     +  +CG   + A+   G+++ WG N 
Sbjct: 82  VFSCGNNDSGQLGHE--KPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNA 139

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G   + +H  PR +   L    V ++ACG+ HT  ++ +G+L+ +G  + G LG
Sbjct: 140 DGQLGLGTPLTIAH-TPR-MVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLG 197

Query: 403 HG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
            G +++  ++PK +  L  + +  +ACG +H+     I+V +       G +F WG    
Sbjct: 198 LGQDVKIETRPKLITGLATIPIAFIACGGYHS-----IVVSK------SGAVFGWGRNTF 246

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG  D   K +P  +  L +      +CG   +V LT  G V+T G+ ++GQLG+   
Sbjct: 247 GQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGAN 306

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +  +     +L    V  IS G  H +A++ S G VY WG   +GQLG   ++   TP 
Sbjct: 307 SNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQ 366

Query: 581 FVE---ALRDRQVESVVCGSSITAAICLHKSISVG 612
            V    + ++R +   V  +S T+  C+ K I  G
Sbjct: 367 MVLGPWSSKNRSLAMEVDSASSTSEDCVVKHIFSG 401



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 149/332 (44%), Gaps = 20/332 (6%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           L+  +  ++CWG    G LG     D  +  P+ ++      V+ ++CGE  T  +TK G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+++ G+N+ G  L  E+ ++      ++   LD     + ACG  H+  V+  GQLF +
Sbjct: 81  EVFSCGNNDSG-QLGHEKPTKR----LQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCW 135

Query: 394 GDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           G    G LG G    ++  P+ V++L    V  +ACG  HT A+ +            G+
Sbjct: 136 GSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN-----------NGE 184

Query: 453 LFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           L+ WG    G+LG   D + +  P  +T L        +CG   ++ ++  G V+  G  
Sbjct: 185 LYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRN 244

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     D+ +  +   L+   VK ++ G      LT  G V+T G    GQLG G
Sbjct: 245 TFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHG 304

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +     P  +  L    V  + CG   T A+
Sbjct: 305 ANSNEILPRQIIELMGSVVTQISCGKRHTLAL 336



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 135/282 (47%), Gaps = 34/282 (12%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +Y WG   +G   +G     +  +PR+L D      V ++ACGE HT +++  G++F+ G
Sbjct: 28  MYCWGSTVYGELGLGGIEDENILMPREL-DFQKATAVEQIACGETHTVLITKDGEVFSCG 86

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +   G LGH   +   + + +  L     K  ACG  H+ A+ +            G+LF
Sbjct: 87  NNDSGQLGHE--KPTKRLQMIPGLDAFIFKQAACGASHSVAVNN-----------WGQLF 133

Query: 455 TWGDADKGRLG--------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            WG    G+LG        H     K L T +        VQ +CG+  T+ LT  G++Y
Sbjct: 134 CWGSNADGQLGLGTPLTIAHTPRMVKALGTSIV-------VQIACGKKHTLALTNNGELY 186

Query: 507 TMGSAVHGQLG---NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
             GS   GQLG   + K + R   ++ G L    +  I+ G YH  V++  G+V+ WG+N
Sbjct: 187 AWGSNSDGQLGLGQDVKIETRP-KLITG-LATIPIAFIACGGYHSIVVSKSGAVFGWGRN 244

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             GQLG+ D  ++  P  ++ LR+ +V+ V CG   +  + +
Sbjct: 245 TFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTM 286


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A+V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALV----------PSSGLIYAFGCGAKGQLG 328


>gi|259490066|ref|NP_001159144.1| uncharacterized protein LOC100304223 [Zea mays]
 gi|223942239|gb|ACN25203.1| unknown [Zea mays]
          Length = 450

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 141/267 (52%), Gaps = 16/267 (5%)

Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNHL 672
           +QS CS CR PFGF RK+HNCYNCGL  C +CS+KK + A+L+PN GKP RVCD+CY  L
Sbjct: 2   EQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYVKL 61

Query: 673 QKITHSGRLLKQENQSPRNLLNLQGSLSEEVKEEKGALTPSRGQSFTSKQSRNVERKPGE 732
            K+  SG +    N  PR    L G    E  + K        QS +S   RN++ K  +
Sbjct: 62  SKVLDSG-VSYSRNTIPR----LPGDTKAERIDTKATRV---AQSNSSDMIRNLDVKAAK 113

Query: 733 CL---ESASSLSSGLQRWGQVSCPIRFKTHCHEKSVEPTPIPKTQMSTHSPLLRKISLGS 789
                E +S + + LQ       P          S      P    ST  P LR   L  
Sbjct: 114 QTKKSEYSSQVPATLQ---LKDIPFISAPDLQNLSTVANQYPYDPRSTL-PSLRMPYLNY 169

Query: 790 NFIPIASTVEKDLSESNKMLNEEVQRLRDQARNLEKQCQIGNQKVQECQQKIEEAWSLAR 849
           +   ++S   + L ++N++L +EVQ+L+ +  +L ++ +  + ++Q+   K  EA +LA 
Sbjct: 170 SSS-MSSESSESLKDANELLKQEVQKLQAEVNSLRQEREQQDAELQKADAKAREAMNLAT 228

Query: 850 EEAEKCKAAKEIIKALAVRLHTLSEKI 876
           EEA K K AK++I +L  +L  +SE++
Sbjct: 229 EEASKLKTAKDVINSLTAQLKEMSERL 255



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 4/60 (6%)

Query: 962  EYAEQYEPGIYITFTTLPSGQKGLKRVRF----SRRRFTEKAAERWWEENQVVVYQKYGI 1017
            E+ EQYEPG+Y+T  +L  G K LKRVRF    SRRRF E  AE WW++N   VY KY +
Sbjct: 379  EWIEQYEPGVYLTLVSLRDGTKELKRVRFSVVCSRRRFGEHQAESWWKDNCEKVYDKYNV 438


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 26/330 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G+ H+  +  +G V  WG+   G+LG   N D   P  V+ L+  NV +++ G + +
Sbjct: 63  VSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN--NVTAIAGGAWHS 120

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            ALT  G ++TWG N  G    G  +SR+   P ++ +  +   ++ +A    H   + +
Sbjct: 121 VALTSDGTVWTWGSNWAGQLGDGTTKSRNK--PVQVNNLKN---ITAIASKGLHNLALKS 175

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++T+G   +G LG G   + + P +  SL    + S+A G +H+ A         K+
Sbjct: 176 DGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN--TIISIAGGGYHSLA--------QKA 225

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   G ++TWG    G+LG      + +P  V  + D   ++  CG   ++ L   G ++
Sbjct: 226 D---GTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIR--CGGDHSIVLKNNGTIW 280

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G   HGQLG+    +RS  V  G LK   +  I  G  H  +L S G+V+TWG N NG
Sbjct: 281 IWGFNQHGQLGDRSTDNRSTPVPMGDLKN--IMTIDGGGDHSLILKSDGTVWTWGNNENG 338

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCG 596
           QLG G +  R TP  ++A     V ++  G
Sbjct: 339 QLGDGTTMSRATP--IQASTLSNVTAIASG 366



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 19/226 (8%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +V+ G +H+  + + G + T+G    G LG G   +   P +V+ L    V ++A G 
Sbjct: 60  ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN--NVTAIAGGA 117

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
           WH+ A+              G ++TWG    G+LG    + +  P  V  L +   + AS
Sbjct: 118 WHSVALTS-----------DGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAI-AS 165

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            G +  + L   G V+T G  ++GQLG+    DR+  V    L    +  I+ G YH   
Sbjct: 166 KG-LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNT--IISIAGGGYHSLA 222

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
             + G+++TWG N  GQLG G    R  P  V  ++D  V  + CG
Sbjct: 223 QKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKD--VSMIRCG 266


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 740

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 182/400 (45%), Gaps = 48/400 (12%)

Query: 233 IGGAVDGSVSQNKTQVDALLPKLLESAV-MLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
            G    G++  +++    L+P+ L+  V   +  ++  G   + L+T   E++ WG+   
Sbjct: 15  FGSNAHGALGFDQSIKVQLVPRTLDVPVKAANAVHVVAGNGASTLLTDGWEIYSWGK--- 71

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
                 V  +    + ++ LS  NV  VS G   +  +  SGE+Y WG  +    L G R
Sbjct: 72  -----TVGTNNQSVRKLQQLS--NVLEVSHGSNHSATVLSSGEVYGWGEMSF---LEGLR 121

Query: 352 RSRSHWLPRKLFDTLDGVRVS--KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
           R R+   PRKL  T D V+++  +VACG+ H  I+   G L + G    G LG G     
Sbjct: 122 RKRTIKQPRKL--TFDKVQLNAKQVACGDRHVCILQNDGMLMSLGANDAGQLGIGRQSKE 179

Query: 410 SQP---------KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           ++          K  +SL  ++ K VACG  H  AI          +A  G LF+WG   
Sbjct: 180 TKVPINHIRIVIKRCDSLSNVQFKEVACGNNHCVAI----------SAQDGALFSWGWGT 229

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            GRLGH+  E    PT V  L   + F + +CG   T+  T  G VY  G   H Q+   
Sbjct: 230 NGRLGHMSEEMCYQPTYVEALSGVEPFTRVACGAAHTLAGTQEGDVYGFGWNGHSQVAGG 289

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           +       +    L+ + V  +S G  H A ++S GS++TWG N +GQ G+G+ +    P
Sbjct: 290 ETDCLKPMLC---LENQGVVRLSCGFAHSAAISSSGSLFTWGMNDDGQCGVGNEETVPRP 346

Query: 580 TFVEALRDR------QVESVVCGSSITAAICLHKSISVGD 613
           T VE   DR       V SV CG S T  +  + + S  D
Sbjct: 347 TRVE-FEDRGGRYEGHVISVACGHSHTVCVLSNYTPSQSD 385


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 159/364 (43%), Gaps = 47/364 (12%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
           +L P +++  +  D+  ++ G  H+A + ++G ++ WG G  GRLGH    ++  P+ VE
Sbjct: 292 SLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVE 351

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFD 364
              G+ V  V+CG F T ALT  G ++ WG         G D  G   +    +P+ L D
Sbjct: 352 GFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVA----VPKHLSD 407

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
                 V  +A G +H+A V+  G L  +G G    LGHG+ QN   PK V  LR     
Sbjct: 408 IE--AAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLR----- 460

Query: 425 SVACGPWHTAAIVDIM----VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
                  +   + D+     V R K          + D D   +  V G      T  T 
Sbjct: 461 -------NRMYVSDLQSMLGVSRLKRE--------YSDLD---VLDVPG------TSGTN 496

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVK 539
              +      CG   T+ LTG G V+  GS   GQLG     ++     V+ +     ++
Sbjct: 497 QSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIR 556

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            I+ GS H   +   G V+ WG N NGQLGLG  +    P  V AL  RQ   V CG   
Sbjct: 557 RIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTAL--RQAVDVFCGDDY 614

Query: 600 TAAI 603
           +A I
Sbjct: 615 SACI 618



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 159/351 (45%), Gaps = 43/351 (12%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S GAKH+   T +G ++ WG G +GRLG   N     P +V+ +   ++  V+ G+  + 
Sbjct: 258 SAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSA 317

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            + + G +YTWG    G   +G        +PRK+ +   GV V +VACG +HT  ++  
Sbjct: 318 CIDRQGVLYTWGSGGFGR--LGHGDQGEIPVPRKV-EGFGGVPVLQVACGTFHTLALTHK 374

Query: 388 GQLFTYGDGT---FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           G +F +G G    FG    G+   V+ PK +  +    V ++A GP+H+AA+        
Sbjct: 375 GTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEA-AVLNIAAGPYHSAAVT------- 426

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               +GG L  WG     RLGH D + +  P  V  L +  +V +    ML  G++ L +
Sbjct: 427 ----VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV-SDLQSML--GVSRLKR 479

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE----FVKGISSGSYHVAVLTSGGSVYTW 560
            Y+               D  +  V G          ++ +  G  H   LT  G+V+ W
Sbjct: 480 EYS---------------DLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVW 524

Query: 561 GKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G N +GQLGLG+  E +   P  +E      +  + CGS    A+  +  +
Sbjct: 525 GSNDDGQLGLGEDVEEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDV 574



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 160/389 (41%), Gaps = 60/389 (15%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKE-----GEVFCWGEGKDGRLGHKVNM----- 300
           + P L+     +    +S G  ++A++ K      G+V+ +G G  GRLG+  N      
Sbjct: 91  VFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVA 150

Query: 301 ----DVSC-------------PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
               D S              P  V       +  +SCG   T AL+  G +Y WG  ++
Sbjct: 151 GYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSY 210

Query: 344 GADLVGERRSRSHWLPRKLF------------------DTLDGVRVSKVACGEWHTAIVS 385
           G   +G+  +   + P +++                     D V V+  + G  H+   +
Sbjct: 211 GN--LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACT 268

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           + G L+T+G G  G LG G+ +    P  V+ +    +  V  G  H+A I     DR  
Sbjct: 269 SDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACI-----DRQ- 322

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G L+TWG    GRLGH D     +P  V        +Q +CG   T+ LT  G V
Sbjct: 323 -----GVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTV 377

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +  G+ +    G  +     +  V   L   E  V  I++G YH A +T GG +  WG  
Sbjct: 378 FAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVG 437

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVES 592
            + +LG GD Q +  P +V  LR+R   S
Sbjct: 438 GSSRLGHGDQQNQPFPKYVADLRNRMYVS 466



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 171/424 (40%), Gaps = 92/424 (21%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G+  G  G   DGS           +PK L S +   V NI+ G  H+A VT  
Sbjct: 377 VFAWGAGLALG-FGEGEDGSGGM------VAVPKHL-SDIEAAVLNIAAGPYHSAAVTVG 428

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECL----------------------------- 311
           G++  WG G   RLGH    +   PK V  L                             
Sbjct: 429 GDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLD 488

Query: 312 ----SGIN-----VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
               SG N     +QS+ CGE  T ALT +G ++ WG N+ G   +GE      + P KL
Sbjct: 489 VPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKL 548

Query: 363 --FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
             F T     + ++ACG  H   V+  G +F +G    G LG G ++   +P  V +LR 
Sbjct: 549 ECFST----PIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR- 603

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIG---GKLFTWGDADKGRLGHVDGERKLLPTC 477
            +   V CG  ++A I  +   +  S   G   G L+ WG A+ G+LG   GE     + 
Sbjct: 604 -QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL--GEDVASGSI 660

Query: 478 VT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           +T + V F     +C  + ++ +    +V+ +                            
Sbjct: 661 LTPQKVVFSVPVCAC-SLDSLEMQAYKRVFCVS--------------------------- 692

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT---FVEALRDRQVESV 593
               + SG+ H   +T+ G  Y WG    G+LG+G +    TPT   F + +R R V + 
Sbjct: 693 -FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAG 751

Query: 594 VCGS 597
            C S
Sbjct: 752 ACHS 755



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 116/278 (41%), Gaps = 51/278 (18%)

Query: 371 VSKVACGEWHTAIVSTSG---QLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSV 426
           V +VA G +HT +V   G   QLF +G     VLG G  ++    P  V     +    V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV------------------- 467
           +CG  ++A +V       ++   GGK++T+G  ++GRLG+                    
Sbjct: 108 SCGTNNSAVLVK------RAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQ 161

Query: 468 -DGERKLLP-TCVTRLVD-FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            DG     P     R  D     + SCG   T+ L+  G +Y  G   +G LG     D 
Sbjct: 162 EDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDS 221

Query: 525 SITV--------VEGKLKEEFVKG-----------ISSGSYHVAVLTSGGSVYTWGKNAN 565
              V          GK KE    G            S+G+ H    TS G+++TWG   N
Sbjct: 222 YTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGN 281

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+LGLG ++   +P  V+ + DR +  V  G S +A I
Sbjct: 282 GRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACI 319



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 143/373 (38%), Gaps = 75/373 (20%)

Query: 264 VQNISLGAKHAALVTKEGE---VFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSV 319
           V+ ++LG  H  +V  +G+   +F WG+     LG  V + +   P LV   S +    V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 320 SCGEFQTCALTK-----SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           SCG   +  L K      G++YT+G  N         R R  + P+   D + G +    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGN---------RGRLGY-PKNKADGVAGYQ---- 153

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
             G++              GDG       G      +P  V      K+  ++CG  HT 
Sbjct: 154 --GDFS-------------GDGQ----EDGPSWFTPKPSRVRFRDKCKIARISCGADHTL 194

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---------------- 478
           A+ D            G L+ WG    G LG  D      P  V                
Sbjct: 195 ALSDE-----------GALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 479 TRLVDFDFVQASC---GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLK 534
              V  D V  +C   G   ++  T  G ++T G   +G+LG    +   S  VV+  L 
Sbjct: 244 VGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILD 303

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
            + V  +++G  H A +   G +YTWG    G+LG GD  E   P  VE      V  V 
Sbjct: 304 RDIVF-VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVA 362

Query: 595 CGSSITAAICLHK 607
           CG+  T A+  HK
Sbjct: 363 CGTFHTLALT-HK 374



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 128/346 (36%), Gaps = 102/346 (29%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG- 322
           ++ I+ G+KH   V + G+VF WG   +G+LG  V      P  V  L       V CG 
Sbjct: 555 IRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGD 612

Query: 323 EFQTCAL-------------TKSGEIYTWGHNNHGADLVGERRSRSHWL-PRKL------ 362
           ++  C               T+ G+++ WG    G   +GE  +    L P+K+      
Sbjct: 613 DYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPV 672

Query: 363 ----FDTLDGVRVSKVAC--------GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                D+L+     +V C        G  H+  ++  G+ + +G G +G LG G   N  
Sbjct: 673 CACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY 732

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P   +  +G++++SVA G  H+ A+           ++ G L+ WG  +          
Sbjct: 733 TPTRCDFPKGVRLRSVAAGACHSLAL-----------SMDGDLWFWGRRED--------- 772

Query: 471 RKLLPTCVT--RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
                TC T   +    F+Q                       + GQ G PK        
Sbjct: 773 -----TCSTTNYMSPRIFMQ-----------------------LEGQGGVPK-------- 796

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
                    VK IS+   H   +T  G V+ WG N   Q G G  Q
Sbjct: 797 ---------VKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQ 833



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 28/224 (12%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+  +T +GE + WG G  GRLG     +   P   +   G+ ++SV+ G   + AL
Sbjct: 699 GTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG----VRVSKVACGEWHTAIVS 385
           +  G+++ WG          +  S ++++  ++F  L+G     +V  ++  E H+  V+
Sbjct: 759 SMDGDLWFWGRRE-------DTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVT 811

Query: 386 TSGQLFTYGDGTFGVLGHGNLQ--NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            +G++F +GD      G G  Q   + +P+ V  L     + VA GP  +  I+      
Sbjct: 812 EAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPS-ACQWVATGPQGSFFIL------ 864

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCV-TRLVDF 484
                  G++F  G    GRLG    +R  +  P  V T   DF
Sbjct: 865 -----ASGEVFAAGVIKSGRLGTGWSKRTYQFSPVAVITHWADF 903


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 159/327 (48%), Gaps = 32/327 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           GA+H  +++ +G+ F            + N  +   +    L   N+  ++CG++ + AL
Sbjct: 4   GAEHMLILSSDGKPF------------EYNYSIEHARFQCILQEKNIIQITCGDYHSLAL 51

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           +K GE++ WG N HG   VG+    +     ++ + L GV +++++ G+ H+  +S SG 
Sbjct: 52  SKGGELFAWGQNLHGQLGVGKIFDST--TAPQIVEHLSGVPLAQISAGKSHSMALSVSGN 109

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           ++++G   FG LG G+  +   P  +E+L   KV+ +ACG  HTA +             
Sbjct: 110 IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTK----------- 158

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LTGLGKVYTM 508
            G +FT+G    G+LGH   + +L P  VT+L      Q +CGR  T+  ++ LGKV++ 
Sbjct: 159 DGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSF 218

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVYTWGKNANG 566
           GS   GQLGN    ++ I +       E +K  +  S    ++ +GG  S+  W K  N 
Sbjct: 219 GSGEEGQLGNGGTHNQLIPLPMKLPSNEELKFENRTSEKELIIIAGGNQSILLWIKKENP 278

Query: 567 QLGLGDSQERETPTFVEALRDRQVESV 593
            + L     R+ PT  E    R +  V
Sbjct: 279 YVNL----RRKIPTLNEGTVKRWIADV 301



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 14/214 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSC 321
           ++  I+ G  H+  ++K GE+F WG+   G+LG  K+    + P++VE LSG+ +  +S 
Sbjct: 37  NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  + AL+ SG IY+WG N+ G   +G    +    P  L + L+  +V  +ACG  HT
Sbjct: 97  GKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKD--FP-SLIEALENQKVEFLACGGSHT 153

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           A+++  G +FT+G G +G LGH + QN  +P  V  L G +V  VACG  HT A V  + 
Sbjct: 154 ALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDL- 212

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                    GK+F++G  ++G+LG+     +L+P
Sbjct: 213 ---------GKVFSFGSGEEGQLGNGGTHNQLIP 237



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 17/210 (8%)

Query: 220 DVMIWGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WG+ + G   +G   D + +          P+++E    + +  IS G  H+  ++
Sbjct: 56  ELFAWGQNLHGQLGVGKIFDSTTA----------PQIVEHLSGVPLAQISAGKSHSMALS 105

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G ++ WG    G+LG     D   P L+E L    V+ ++CG   T  LTK G ++T+
Sbjct: 106 VSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTF 165

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
           G   +G   +G   +++   P  L   L G RV++VACG  HT A VS  G++F++G G 
Sbjct: 166 GAGKYGQ--LGHNSTQNELRP-CLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGE 222

Query: 398 FGVLGHGNLQN--VSQPKEVESLRGLKVKS 425
            G LG+G   N  +  P ++ S   LK ++
Sbjct: 223 EGQLGNGGTHNQLIPLPMKLPSNEELKFEN 252



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 100/239 (41%), Gaps = 26/239 (10%)

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G  H  I+S+ G+ F Y       + H   Q + Q K         +  + CG +H+ A+
Sbjct: 4   GAEHMLILSSDGKPFEYNYS----IEHARFQCILQEK--------NIIQITCGDYHSLAL 51

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD-GERKLLPTCVTRLVDFDFVQASCGRML 495
                      + GG+LF WG    G+LG     +    P  V  L      Q S G+  
Sbjct: 52  -----------SKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSH 100

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           ++ L+  G +Y+ G    GQLG     D+    +   L+ + V+ ++ G  H A+LT  G
Sbjct: 101 SMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDG 160

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC--LHKSISVG 612
            V+T+G    GQLG   +Q    P  V  L   +V  V CG   T A    L K  S G
Sbjct: 161 LVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFG 219


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 172

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 173 SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 230

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 231 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 284

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 285 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 339

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 340 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 399

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 400 CGARGQLGTGHTCNVKCPSPVKG 422



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 80  MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 139

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 140 NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 194

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 195 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 243

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 244 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 303

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 304 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 363

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 364 PRRVLELMGSEVTQIACGRQHTLAF 388



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 172

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 173 SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 221

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 277

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 278 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 338 KSGGVFTFGAGSCGQ 352



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 188 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 247

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 248 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 307

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 308 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 364

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 365 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 407


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH    + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHV--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++ GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+  +GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHVREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALASDGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G++G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 27/321 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++ LGA H  +++  G+ F +            N  +   +    L 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYD-----------NYSMKHLRFESILQ 136

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  ++CG++ + AL+K GE++ WG N HG   VG R+  S   P ++ + L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLSGIPLA 194

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S SG ++++G   FG LG  + ++   P  +E+L   KV+ +ACG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G LFT+G    G+LGH   + +L P  V  L      Q +CG
Sbjct: 255 TALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACG 303

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN   +D+ I +       E +K  S  S    ++
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKFESHTSEKELIM 363

Query: 552 TSG--GSVYTWGKNANGQLGL 570
            +G   S+  W K  N  + L
Sbjct: 364 IAGENQSILLWIKKENSYVNL 384



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC 428
           ++ ++ CG++H+  +S  G+LF +G    G LG G    + + P+ VE L G+ +  ++ 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  H+ A+           ++ G +++WG  + G+LG    E K  P+ +  L +     
Sbjct: 199 GEAHSMAL-----------SMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEF 247

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH- 547
            +CG   T  LT  G ++T G+  HGQLG+   ++     +  +L    V  I+ G +H 
Sbjct: 248 LACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHT 307

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           +A ++  G V+++G    GQLG G ++++  P
Sbjct: 308 LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++ W
Sbjct: 156 GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSW 215

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+ + G+LG         P L+E L    V+ ++CG   T  LT+ G ++T+G   HG  
Sbjct: 216 GKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQ- 274

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGN 405
            +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+G 
Sbjct: 275 -LGHNSTQNELRP-CLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGG 332

Query: 406 LQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  +  P +V S   LK +S      HT+    IM+
Sbjct: 333 TRDQLIPLPMKVSSNEDLKFES------HTSEKELIMI 364



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 28/247 (11%)

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL---QNVSQPKEVESL 418
           LF +  G+R + +   E    I  +SG+L     G  GV  H  L     +  PK ++  
Sbjct: 35  LFPSTAGLRRTLLRRVEATRQICCSSGRLAFLERGGAGVQVHQLLPGSDGLRTPKCIKLG 94

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
           + +K+ S+  G  H   +           + GGK F +   D   + H+  E        
Sbjct: 95  KNMKIHSMDLGADHMLIL-----------SSGGKPFEY---DNYSMKHLRFE-------- 132

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEE 536
           + L +   +Q +CG   ++ L+  G+++  G  +HGQLG  +    + T  +VE  L   
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLSGI 191

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            +  IS+G  H   L+  G++Y+WGKN  GQLGL  ++ +++P+ +EAL +++VE + CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACG 251

Query: 597 SSITAAI 603
            S TA +
Sbjct: 252 GSHTALL 258



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 35/252 (13%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  +  G  H  I+S+ G+ F Y + +   + H   +++ Q K        K+  + C
Sbjct: 97  MKIHSMDLGADHMLILSSGGKPFEYDNYS---MKHLRFESILQEK--------KIIQITC 145

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDF 484
           G +H+ A+           + GG+LF WG    G+LG     RK      P  V  L   
Sbjct: 146 GDYHSLAL-----------SKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLSGI 191

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGIS 542
              Q S G   ++ L+  G +Y+ G    GQLG  + ++KD S +++E  L  + V+ ++
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKD-SPSLIEA-LDNQKVEFLA 249

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G  H A+LT  G ++T+G   +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 250 CGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309

Query: 603 IC--LHKSISVG 612
               L K  S G
Sbjct: 310 YVSDLGKVFSFG 321


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 167/340 (49%), Gaps = 27/340 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+  +G V   G+   G+LG +       PK ++ L  + V+ VSCG+  + A+
Sbjct: 42  GERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAV 101

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +   + +P+K+  TL G+++ +V+CG +H+  +S  GQ
Sbjct: 102 CYKGRVFAWGAGSEGQLGIGEFK-EINLIPQKI-KTLTGIKIIQVSCGNYHSLALSEDGQ 159

Query: 390 LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G  L + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 160 VFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFAL-----------S 208

Query: 449 IGGKLFTWGDADKGRLGHVDGE---RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG  + G+L         +   P  V+ L     V  SCG   T  LT  GKV
Sbjct: 209 LSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKV 268

Query: 506 YTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKN 563
           +T G    GQLG+ P A+     ++EG   E  V  I  GSYH +A + + G V ++G+ 
Sbjct: 269 FTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 326

Query: 564 ------ANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
                 +N    L ++ +       E L D QV+ +  G+
Sbjct: 327 PSCKSCSNHPELLTENTDVTCLISAERLVDVQVKHIFAGT 366



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 29/267 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNMDVSCPKLV 308
           PK +++   L V+ +S G +H+  V  +G VF WG G +G+LG     ++N+    P+ +
Sbjct: 77  PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINL---IPQKI 133

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           + L+GI +  VSCG + + AL++ G++++WG N+HG   +G +   S   P+++  +LDG
Sbjct: 134 KTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLG-KELPSQASPQRV-RSLDG 191

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGD---GTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           + +++VA G  H+  +S SG  F +G    G     G        +P+ V +L+ L V  
Sbjct: 192 IPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVY 251

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           ++CG  HTA +              GK+FT+GD   G+LGH     K  P  +  +    
Sbjct: 252 ISCGHEHTAVLTQ-----------NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL- 299

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAV 512
             Q  CG   T     L  VYT G  V
Sbjct: 300 VSQIDCGSYHT-----LAYVYTTGQVV 321



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 28/263 (10%)

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  + + A GE H+ ++ + G + + GD + G LG   LQ   QPK +++L  L+V+ V+
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDF 484
           CG  H+ A+              G++F WG   +G+LG   GE K   L+P  +  L   
Sbjct: 93  CGKEHSLAV-----------CYKGRVFAWGAGSEGQLG--IGEFKEINLIPQKIKTLTGI 139

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVK 539
             +Q SCG   ++ L+  G+V++ GS  HGQLG  K     A  + +  ++G      + 
Sbjct: 140 KIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIP----LA 195

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCG 596
            +++G  H   L+  G+ + WG N  GQL    S    +   P  V AL+   V  + CG
Sbjct: 196 QVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCG 255

Query: 597 SSITAAICLHKSISVGDQSSCSQ 619
              TA +  +  +     +SC Q
Sbjct: 256 HEHTAVLTQNGKVFTFGDNSCGQ 278



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +   L+P+ +++   + +  +S G  H+  ++++G+VF WG    G+
Sbjct: 111 GAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQ 170

Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG    +   + P+ V  L GI +  V+ G   + AL+ SG  + WG NN G     G  
Sbjct: 171 LGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSN 230

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + PR +   L  + V  ++CG  HTA+++ +G++FT+GD + G LGH      + 
Sbjct: 231 VPVQSYKPRSV-SALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTG 289

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ +E + GL V  + CG +HT A V
Sbjct: 290 PQLMEGIEGL-VSQIDCGSYHTLAYV 314



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
           V +  P+ + +   L V  IS G +H A++T+ G+VF +G+   G+LGH    + + P+L
Sbjct: 233 VQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQL 292

Query: 308 VECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
           +E + G+ V  + CG + T A +  +G++ ++G
Sbjct: 293 MEGIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 324


>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1166

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 193/402 (48%), Gaps = 44/402 (10%)

Query: 212 IERKDI-LKD---VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNI 267
           IE+K+  LKD   V +WG    G  +G A          +     P    ++  + +++I
Sbjct: 23  IEKKNKKLKDFTPVYVWGSDTYG-QLGLA--------SREFGKSCPSPRFTSFSVVIEDI 73

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV--SCPKLVECLSGINVQSVSCGEFQ 325
           + G +H + + + G V+  G    G+LG  V+     S P LVE L G     +SCG + 
Sbjct: 74  ACGEEHTSFIAQNGYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYH 133

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  +  +G+++TWG N  G   +G  +S +   P+ + D  + + V  V+CG+ +T +++
Sbjct: 134 TATVCDNGQLFTWGQNCEGQLGIG--KSDNMTTPQ-IVDLKNNLAVF-VSCGKRNTMVIT 189

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            + ++F +GDG  G LG GN  N  +P++++ ++   + +++CG  HT  + +       
Sbjct: 190 QTQKIFGFGDGKCGQLGLGNECNEYKPRQLQ-IQMQNIVAISCGDRHTLFLNE------- 241

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA-SCGRMLTVGLTGLG 503
                G+ F+ G+    +LG  +  +   +P  V +     FV+  +    ++  L+  G
Sbjct: 242 ----EGEAFSCGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEG 297

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +Y  G+   GQ   P       T  E   K+  +  I  G+  + +L   G VY+WG N
Sbjct: 298 YLYLWGTGFFGQFDRP-------TRCEFAPKD--LLDICIGNQFICLLDGEGKVYSWGSN 348

Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G+LG G  + Q+   P  V+ ++D+ V+ + CG++   A+
Sbjct: 349 MFGELGQGIANGQQALEPIQVDKIKDKNVKRLYCGANFVFAM 390



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFV--QASCGRMLTVGLTGLGKVYTMG 509
           ++ WG    G+LG     R+   +C + R   F  V    +CG   T  +   G VY+MG
Sbjct: 36  VYVWGSDTYGQLGL--ASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMG 93

Query: 510 SAVHGQLG---NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           +   GQLG   +      + T+VEG LK      IS G+YH A +   G ++TWG+N  G
Sbjct: 94  NNNQGQLGVSVDESYYKSAPTLVEG-LKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEG 152

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-LHKSISVGD 613
           QLG+G S    TP  V+ L++     V CG   T  I    K    GD
Sbjct: 153 QLGIGKSDNMTTPQIVD-LKNNLAVFVSCGKRNTMVITQTQKIFGFGD 199


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 167/346 (48%), Gaps = 31/346 (8%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
            ++ G  H+ L  ++ +VF WG+G  GRLG     +   P +   +    VQ  S G   
Sbjct: 90  GVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLH 146

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
             ALT+ G +YTWG+   GA  +G        LPR L +     R+  V+ G  H+A V+
Sbjct: 147 NIALTEVGNVYTWGYGAFGA--LGHGSYERELLPR-LLEGPWKDRIVHVSAGGSHSAAVT 203

Query: 386 TSGQLFTYG-DGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            SG+L+T+G D   G LGHGN        +S+P +V++L  + + SV CG + T A+   
Sbjct: 204 ESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFFTMALT-- 260

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                KS    G+L++WG      LGH        P  V  L D   VQ +CG      L
Sbjct: 261 -----KS----GQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           T  GKV T G   +GQLG+   ++     +   + ++    I+ G    A +T  G +YT
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYT 371

Query: 560 WGKNANGQLGL-GDSQERETPTFV---EALRDR---QVESVVCGSS 598
           WGKN + QLG+ G   E+  P  V   +AL ++   +V  V CG++
Sbjct: 372 WGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGAN 417



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 42/368 (11%)

Query: 280 EGEVFCWGEGKDGRLGH------KVNMDVSCPKLVECLSGINVQS------------VSC 321
           E EV+ WG G  G++GH      K+ + +S  KL        +Q             V+C
Sbjct: 34  ELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G F +    +  +++ WG  + G   +G     + + P   +      RV   + G  H 
Sbjct: 94  GLFHSVLFAEQ-DVFVWGKGDGGR--LGIDTEFNQYKP---YVNPRIKRVQMASAGGLHN 147

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             ++  G ++T+G G FG LGHG+ +    P+ +E     ++  V+ G  H+AA+ +   
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTE--- 204

Query: 442 DRCKSNAIGGKLFTWG-DADKGRLGH-----VDGERKLLPTCVTRLVDFDFVQASCGRML 495
                    G+L+TWG D  +GRLGH     +D      PT V  L D       CG   
Sbjct: 205 --------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFF 255

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           T+ LT  G++++ G   + +LG+    +     V   L++  +  ++ G +H A LT  G
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDG 315

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
            V TWG   NGQLG G  +  + P  VEA+ D+    + CG + TAAI  +  +    ++
Sbjct: 316 KVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKN 375

Query: 616 SCSQCRMP 623
              Q  +P
Sbjct: 376 RDYQLGIP 383


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 159/364 (43%), Gaps = 47/364 (12%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
           +L P +++  +  D+  ++ G  H+A + ++G ++ WG G  GRLGH    ++  P+ VE
Sbjct: 292 SLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVE 351

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFD 364
              G+ V  V+CG F T ALT  G ++ WG         G D  G   +    +P+ L D
Sbjct: 352 GFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVA----VPKHLSD 407

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
                 V  +A G +H+A V+  G L  +G G    LGHG+ QN   PK V  LR     
Sbjct: 408 IE--AAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLR----- 460

Query: 425 SVACGPWHTAAIVDIM----VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
                  +   + D+     V R K          + D D   +  V G      T  T 
Sbjct: 461 -------NRMYVSDLQSMLGVSRLKRE--------YSDLD---VLDVPG------TSGTN 496

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVK 539
              +      CG   T+ LTG G V+  GS   GQLG     ++     V+ +     ++
Sbjct: 497 QSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIR 556

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            I+ GS H   +   G V+ WG N NGQLGLG  +    P  V AL  RQ   V CG   
Sbjct: 557 RIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTAL--RQAVDVFCGDDY 614

Query: 600 TAAI 603
           +A I
Sbjct: 615 SACI 618



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 159/351 (45%), Gaps = 43/351 (12%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S GAKH+   T +G ++ WG G +GRLG   N     P +V+ +   ++  V+ G+  + 
Sbjct: 258 SAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSA 317

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            + + G +YTWG    G   +G        +PRK+ +   GV V +VACG +HT  ++  
Sbjct: 318 CIDRQGVLYTWGSGGFGR--LGHGDQGEIPVPRKV-EGFGGVPVLQVACGTFHTLALTHK 374

Query: 388 GQLFTYGDGT---FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           G +F +G G    FG    G+   V+ PK +  +    V ++A GP+H+AA+        
Sbjct: 375 GTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEA-AVLNIAAGPYHSAAVT------- 426

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               +GG L  WG     RLGH D + +  P  V  L +  +V +    ML  G++ L +
Sbjct: 427 ----VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV-SDLQSML--GVSRLKR 479

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE----FVKGISSGSYHVAVLTSGGSVYTW 560
            Y+               D  +  V G          ++ +  G  H   LT  G+V+ W
Sbjct: 480 EYS---------------DLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVW 524

Query: 561 GKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G N +GQLGLG+  E +   P  +E      +  + CGS    A+  +  +
Sbjct: 525 GSNDDGQLGLGEDVEEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDV 574



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 160/389 (41%), Gaps = 60/389 (15%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKE-----GEVFCWGEGKDGRLGHKVNM----- 300
           + P L+     +    +S G  ++A++ K      G+V+ +G G  GRLG+  N      
Sbjct: 91  VFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVA 150

Query: 301 ----DVSC-------------PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
               D S              P  V       +  +SCG   T AL+  G +Y WG  ++
Sbjct: 151 GYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSY 210

Query: 344 GADLVGERRSRSHWLPRKLF------------------DTLDGVRVSKVACGEWHTAIVS 385
           G   +G+  +   + P +++                     D V V+  + G  H+   +
Sbjct: 211 GN--LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACT 268

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           + G L+T+G G  G LG G+ +    P  V+ +    +  V  G  H+A I     DR  
Sbjct: 269 SDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACI-----DRQ- 322

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G L+TWG    GRLGH D     +P  V        +Q +CG   T+ LT  G V
Sbjct: 323 -----GVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTV 377

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLK--EEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +  G+ +    G  +     +  V   L   E  V  I++G YH A +T GG +  WG  
Sbjct: 378 FAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVG 437

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVES 592
            + +LG GD Q +  P +V  LR+R   S
Sbjct: 438 GSSRLGHGDQQNQPFPKYVADLRNRMYVS 466



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 171/424 (40%), Gaps = 92/424 (21%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G+  G  G   DGS           +PK L S +   V NI+ G  H+A VT  
Sbjct: 377 VFAWGAGLALG-FGEGEDGSGGM------VAVPKHL-SDIEAAVLNIAAGPYHSAAVTVG 428

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECL----------------------------- 311
           G++  WG G   RLGH    +   PK V  L                             
Sbjct: 429 GDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLD 488

Query: 312 ----SGIN-----VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
               SG N     +QS+ CGE  T ALT +G ++ WG N+ G   +GE      + P KL
Sbjct: 489 VPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKL 548

Query: 363 --FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
             F T     + ++ACG  H   V+  G +F +G    G LG G ++   +P  V +LR 
Sbjct: 549 ECFST----PIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR- 603

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIG---GKLFTWGDADKGRLGHVDGERKLLPTC 477
            +   V CG  ++A I  +   +  S   G   G L+ WG A+ G+LG   GE     + 
Sbjct: 604 -QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL--GEDVASGSI 660

Query: 478 VT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           +T + V F     +C  + ++ +    +V+ +                            
Sbjct: 661 LTPQKVVFSVPVCAC-SLDSLEMQAYKRVFCVS--------------------------- 692

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT---FVEALRDRQVESV 593
               + SG+ H   +T+ G  Y WG    G+LG+G +    TPT   F + +R R V + 
Sbjct: 693 -FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAG 751

Query: 594 VCGS 597
            C S
Sbjct: 752 ACHS 755



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 116/278 (41%), Gaps = 51/278 (18%)

Query: 371 VSKVACGEWHTAIVSTSG---QLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSV 426
           V +VA G +HT +V   G   QLF +G     VLG G  ++    P  V     +    V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV------------------- 467
           +CG  ++A +V       ++   GGK++T+G  ++GRLG+                    
Sbjct: 108 SCGTNNSAVLVK------RAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQ 161

Query: 468 -DGERKLLP-TCVTRLVD-FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
            DG     P     R  D     + SCG   T+ L+  G +Y  G   +G LG     D 
Sbjct: 162 EDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDS 221

Query: 525 SITV--------VEGKLKEEFVKG-----------ISSGSYHVAVLTSGGSVYTWGKNAN 565
              V          GK KE    G            S+G+ H    TS G+++TWG   N
Sbjct: 222 YTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGN 281

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+LGLG ++   +P  V+ + DR +  V  G S +A I
Sbjct: 282 GRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACI 319



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 143/373 (38%), Gaps = 75/373 (20%)

Query: 264 VQNISLGAKHAALVTKEGE---VFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSV 319
           V+ ++LG  H  +V  +G+   +F WG+     LG  V + +   P LV   S +    V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 320 SCGEFQTCALTK-----SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           SCG   +  L K      G++YT+G  N         R R  + P+   D + G +    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGN---------RGRLGY-PKNKADGVAGYQ---- 153

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
             G++              GDG       G      +P  V      K+  ++CG  HT 
Sbjct: 154 --GDFS-------------GDGQ----EDGPSWFTPKPSRVRFRDKCKIARISCGADHTL 194

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---------------- 478
           A+ D            G L+ WG    G LG  D      P  V                
Sbjct: 195 ALSDE-----------GALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 479 TRLVDFDFVQASC---GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLK 534
              V  D V  +C   G   ++  T  G ++T G   +G+LG    +   S  VV+  L 
Sbjct: 244 VGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILD 303

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
            + V  +++G  H A +   G +YTWG    G+LG GD  E   P  VE      V  V 
Sbjct: 304 RDIVF-VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVA 362

Query: 595 CGSSITAAICLHK 607
           CG+  T A+  HK
Sbjct: 363 CGTFHTLALT-HK 374



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 128/346 (36%), Gaps = 102/346 (29%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG- 322
           ++ I+ G+KH   V + G+VF WG   +G+LG  V      P  V  L       V CG 
Sbjct: 555 IRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGD 612

Query: 323 EFQTCAL-------------TKSGEIYTWGHNNHGADLVGERRSRSHWL-PRKL------ 362
           ++  C               T+ G+++ WG    G   +GE  +    L P+K+      
Sbjct: 613 DYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPV 672

Query: 363 ----FDTLDGVRVSKVAC--------GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
                D+L+     +V C        G  H+  ++  G+ + +G G +G LG G   N  
Sbjct: 673 CACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAY 732

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            P   +  +G++++SVA G  H+ A+           ++ G L+ WG  +          
Sbjct: 733 TPTRCDFPKGVRLRSVAAGACHSLAL-----------SMDGDLWFWGRRED--------- 772

Query: 471 RKLLPTCVT--RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
                TC T   +    F+Q                       + GQ G PK        
Sbjct: 773 -----TCSTTNYMSPRIFMQ-----------------------LEGQGGVPK-------- 796

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
                    VK IS+   H   +T  G V+ WG N   Q G G  Q
Sbjct: 797 ---------VKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQ 833



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 28/224 (12%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+  +T +GE + WG G  GRLG     +   P   +   G+ ++SV+ G   + AL
Sbjct: 699 GTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG----VRVSKVACGEWHTAIVS 385
           +  G+++ WG          +  S ++++  ++F  L+G     +V  ++  E H+  V+
Sbjct: 759 SMDGDLWFWGRRE-------DTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVT 811

Query: 386 TSGQLFTYGDGTFGVLGHGNLQ--NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            +G++F +GD      G G  Q   + +P+ V  L     + VA GP  +  I+      
Sbjct: 812 EAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPS-ACQWVATGPQGSFFIL------ 864

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCV-TRLVDF 484
                  G++F  G    GRLG    +R  +  P  V T   DF
Sbjct: 865 -----ASGEVFAAGVIKSGRLGTGWSKRTYQFSPVAVITHWADF 903


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%)

Query: 283 VFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           + CWG  KDG+LG  V  + V  P+     SG  ++ V CG   +  L   G +YT G N
Sbjct: 1   MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           + G   +G  ++    +  ++   LD  +++ V+CG  H+  V+  GQLF +G G  G L
Sbjct: 61  SCGQ--LGHDKAG---ISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQL 115

Query: 402 GHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G G  +  V  P+ V+ L   ++  V CG  H           C + +  G+LFTWG   
Sbjct: 116 GLGTTETTVRIPRLVKRLCDHRISQVMCGNQH-----------CVALSRDGQLFTWGQNT 164

Query: 461 KGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            G+LG   GE  KL P  +  L      Q + G   +  L+  G V+  G    GQLG  
Sbjct: 165 SGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLN 224

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
             +DR++      L+ + V  IS G  H A LT  G ++T+G  + GQLG G +     P
Sbjct: 225 DKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLP 284

Query: 580 TFVEALRDRQVESVVCGSSITAAIC 604
             V  L   +V  + CG   T A  
Sbjct: 285 RRVLELMGTEVSQIACGRHHTLAFV 309



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 262 LDVQNISL---GAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQ 317
           LD Q I++   G  H+  V ++G++F WG G  G+LG       V  P+LV+ L    + 
Sbjct: 80  LDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRIS 139

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF----DTLDGVRVSK 373
            V CG     AL++ G+++TWG N  G   +G+        P KLF     +L G+ +++
Sbjct: 140 QVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGE------PSKLFPHPLKSLAGIPLAQ 193

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +  G  H+  +S SG +F +G    G LG  + Q+ + P  ++ LR  KV  ++CG  HT
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHT 253

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
           AA+              G LFT+GD   G+LGH     +LLP  V  L+  +  Q +CGR
Sbjct: 254 AALTK-----------DGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGR 302

Query: 494 MLTVGLT-GLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSG 544
             T+      G VY  G   HGQLG     D RS   V+  +  E  + I+ G
Sbjct: 303 HHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINIG 355



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 17/318 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +  G +H+  +  +G V+  G    G+LGH     +S P++V  L    +  VSCG 
Sbjct: 35  LKEVGCGGQHSVFLMHDGSVYTCGSNSCGQLGHD-KAGIS-PEVVGALDTQKITMVSCGR 92

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A+ + G+++ WG  + G   +G   +    +PR L   L   R+S+V CG  H   
Sbjct: 93  GHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVR-IPR-LVKRLCDHRISQVMCGNQHCVA 150

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +S  GQLFT+G  T G LG G  +     P  ++SL G+ +  +  G  H+ A+      
Sbjct: 151 LSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFAL------ 204

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG    G+LG  D + + +P  +  L     V  SCG   T  LT  
Sbjct: 205 -----SLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKD 259

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G ++T G    GQLG+       +     +L    V  I+ G +H +A + S G VY +G
Sbjct: 260 GGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFG 319

Query: 562 KNANGQLGLGDSQERETP 579
            N++GQLG G   +  +P
Sbjct: 320 CNSHGQLGTGILGDARSP 337



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 4/205 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +    T+    +P+L++      +  +  G +H   ++++G++F WG+   G+
Sbjct: 108 GAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQ 167

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K       P  ++ L+GI +  ++ G   + AL+ SG ++ WG N  G   + +++
Sbjct: 168 LGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQ 227

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R+  +P  +   L   +V  ++CG+ HTA ++  G LFT+GDG++G LGHG+  +   P
Sbjct: 228 DRA--VPCHI-KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLP 284

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + V  L G +V  +ACG  HT A V
Sbjct: 285 RRVLELMGTEVSQIACGRHHTLAFV 309


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A+V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALV----------PSSGLIYAFGCGAKGQLG 328


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 172/382 (45%), Gaps = 67/382 (17%)

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E  V+ WG G +G+LG K+  D   P+L+   S  ++ S++CG     ALT +G+  +WG
Sbjct: 17  EQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWG 76

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             N G    GE  S +  L  K   +LDG  ++ V+ G  H+  VS +G +FT GDG+FG
Sbjct: 77  RGNSGQLGHGEVVSNT--LYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFG 134

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV----------------DIMVDR 443
            LGHG+  +   P +V     L V  VACG  H+  ++                 +  DR
Sbjct: 135 QLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDR 194

Query: 444 CKSN---------------------------AIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            KS                            ++ G ++TWG   KG       E   +P 
Sbjct: 195 VKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGF------EDAHVPQ 248

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----------PKAKDRSI 526
           C+      +F + + G    + ++G G+VY +G    G L +          P  ++ ++
Sbjct: 249 CLNS--SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNL 306

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
             V G L    +  I++G+ H  ++T  G + TWG   +GQLGLGD++++ +P  V    
Sbjct: 307 EKVPG-LDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDY 365

Query: 587 DRQVES---VVCGSSITAAICL 605
           D    +   V CGS  T A+ +
Sbjct: 366 DLNEAASIRVFCGSGFTFAVTM 387



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 123/322 (38%), Gaps = 76/322 (23%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G +   +   + L PK + S     + ++S G  H+  V+  G VF  G+G  G+LGH  
Sbjct: 81  GQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGD 140

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           N     P  V C   ++V  V+CG   +  L K  ++Y +G    G   V   R +S  +
Sbjct: 141 NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNV 200

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT--------------------- 397
           P K+    +GV +   A    H+A VS  G ++T+G G                      
Sbjct: 201 P-KVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKV 259

Query: 398 -----------------------FGVLGHGNLQNVSQPKEVESLR-----------GLKV 423
                                   GVL   +LQN+   K    LR           G K+
Sbjct: 260 ALGWNHALAMSGEGEVYMLGGNHLGVL--SDLQNIGPAKHFPDLREFNLEKVPGLDGTKI 317

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
             +A G  H+  + +            G++ TWG  + G+LG  D   +  P  V+  +D
Sbjct: 318 TDIAAGAEHSVIVTEH-----------GEIKTWGWGEHGQLGLGDTRDQTSPVTVS--LD 364

Query: 484 FDFVQAS-----CGRMLTVGLT 500
           +D  +A+     CG   T  +T
Sbjct: 365 YDLNEAASIRVFCGSGFTFAVT 386


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A+V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALV----------PSSGLIYAFGCGAKGQLG 328


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A+V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALV----------PSSGLIYAFGCGAKGQLG 328


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H   + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHE--REGNQPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++T GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 147/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+  +G  +   V+ P+    +S  +V+ V+CG      L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNQ--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALATDGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H   +   G+++T G  T G LGH    N  QP+++ +L    +  VACG 
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN--QPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------QGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A+V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALV----------PSSGLIYAFGCGAKGQLG 328


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A++ S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A+
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAL 309



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A+V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALV----------PSSGLIYAFGCGAKGQLG 328


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 162/378 (42%), Gaps = 78/378 (20%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  WG   DG LGH   ++   P  +E LS + V+ V+ GEF +  LT++GE+ ++G 
Sbjct: 567 GLILSWGANSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGL 626

Query: 341 NNHG------------ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           N+ G            +DL    R R   LP    D L    V  +A G +H+A+V+  G
Sbjct: 627 NDQGQCGQPITKIAESSDLAAVARPRPIVLP----DDLRKKTVVSIAAGGYHSALVTADG 682

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQ--------------------PKEVESLRGLKVKSVAC 428
           +L+T+G G    LGH  +  + +                    P  + +L G  VK VAC
Sbjct: 683 ELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVAC 742

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFV 487
           G +H+A + +            G L+TWG    G+LGH D   +  P  V   + D   V
Sbjct: 743 GRFHSACVTE-----------EGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMV 791

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK--------------- 532
           + +CG   +  +   G +YT G    GQLG     D  I    G+               
Sbjct: 792 KVACGENHSAAVDSAGVIYTTGGDESGQLGK---GDEWICATHGEGCTGSGWSCQERIPT 848

Query: 533 -------LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
                     +FV  I+ G    A +T+ G +YTWGK     LGLG S +   PT + ++
Sbjct: 849 FLSILSVRHVQFVD-IACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSEPTHLSSI 905

Query: 586 RDRQVESVVCGSSITAAI 603
               V SV CG    AA+
Sbjct: 906 DG--VVSVACGDIHAAAL 921



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 200/449 (44%), Gaps = 94/449 (20%)

Query: 196 KNESHRLVTPTYGSPLIERKDILKDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALL 252
           KN+S   +   Y +  I+ +  L  ++ WG   +GVLG   GG            ++ L 
Sbjct: 548 KNKSEEFIAEYYKN--IKEQTGL--ILSWGANSDGVLG-HTGG------------IEQLW 590

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN--------MDVSC 304
           P  +ES   + V+ ++ G  H+  +T+ GEV  +G    G+ G  +           V+ 
Sbjct: 591 PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVAR 650

Query: 305 PK---LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH---GADLV---GERRSRS 355
           P+   L + L    V S++ G + +  +T  GE+YT+G       G D V   GE  +  
Sbjct: 651 PRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNAL 710

Query: 356 HWL------------PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           H+             P +L   L+G  V +VACG +H+A V+  G L+T+G G  G LGH
Sbjct: 711 HYRSNSAQTSYFQPKPTRL-SALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGH 769

Query: 404 GNLQNVSQPKEVESLRGLKVK---SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G++ + + PK VE+  G+K K    VACG  H+AA+              G ++T G  +
Sbjct: 770 GDMTDQATPKRVEA--GIKDKIMVKVACGENHSAAVDS-----------AGVIYTTGGDE 816

Query: 461 KGRLGHVD-------GE---------RKLLPTCVTRLV--DFDFVQASCGRMLTVGLTGL 502
            G+LG  D       GE         ++ +PT ++ L      FV  +CG      +T  
Sbjct: 817 SGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNR 876

Query: 503 GKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           G +YT G      LG     ++   ++ ++G      V  ++ G  H A LT  G +Y W
Sbjct: 877 GLLYTWGKGTALGLGPSGDVSEPTHLSSIDG------VVSVACGDIHAAALTDKGQLYMW 930

Query: 561 GKNANGQLGLGDSQE--RETPTFVEALRD 587
           G +  G+LG G S E    TP  V A  D
Sbjct: 931 GSSEAGRLGDGRSTEGVTRTPKLVPAFAD 959



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 66/324 (20%)

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
           ++G I +WG N+ G  ++G         P  + ++L  V+V  VA GE+H+  ++ +G++
Sbjct: 565 QTGLILSWGANSDG--VLGHTGGIEQLWPLAI-ESLSSVQVKMVAAGEFHSLCLTENGEV 621

Query: 391 FTYGDGTFGVLGH--------GNLQNVSQPKEV---ESLRGLKVKSVACGPWHTAAIVDI 439
            ++G    G  G          +L  V++P+ +   + LR   V S+A G +H+A +   
Sbjct: 622 TSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVT-- 679

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHV------DGERKLL--------------PTCVT 479
                      G+L+T+G   + +LGH       +G   L               PT ++
Sbjct: 680 ---------ADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLS 730

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFV 538
            L      Q +CGR  +  +T  G +YT G   +GQLG+    D++    VE  +K++ +
Sbjct: 731 ALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIM 790

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS-----------------QERETPTF 581
             ++ G  H A + S G +YT G + +GQLG GD                  QER  PTF
Sbjct: 791 VKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQER-IPTF 849

Query: 582 VEALRDRQVE--SVVCGSSITAAI 603
           +  L  R V+   + CG    AAI
Sbjct: 850 LSILSVRHVQFVDIACGHGFCAAI 873


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 169 LGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   KG+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGAKGQLG 328


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 121/213 (56%), Gaps = 14/213 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
           +  I+ G  H+  ++K GE+F WG+   G+LG  ++   +  P+LVE LSG+ +  +S G
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + AL+ SG IY+WG N+ G   +G   +     P  L + LD  +V  +ACG  HTA
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQ--LGLGHTDGEEFP-SLVEALDSQKVEFLACGGSHTA 165

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++  GQ+FT+G G  G LGH + QN  +P+ V  L G++V  VACG  HT A V  +  
Sbjct: 166 LLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDL-- 223

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                   GK+F++G   +G+LG+     +L+P
Sbjct: 224 --------GKVFSFGSGKEGQLGNGGTHNQLIP 248



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 32/335 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + + ++  GA+H  +++ +G+ F            + N  +   +    L   ++  ++C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPF------------EYNYSIEHARFQCILQEKSIIQITC 54

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G++ + AL+K GE++ WG N HG   +G R   S   P +L + L GV + +++ G+ H+
Sbjct: 55  GDYHSLALSKGGELFAWGQNLHGQLGIG-RLFASIPTP-QLVEHLSGVPLVQISAGKAHS 112

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S SG ++++G    G LG G+      P  VE+L   KV+ +ACG  HTA + +   
Sbjct: 113 MALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE--- 169

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LT 500
                    G++FT+G    G+LGH   + +L P  VT L      Q +CGR  T+  ++
Sbjct: 170 --------DGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVS 221

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVY 558
            LGKV++ GS   GQLGN    ++ I +       E +K  S  S    ++ +GG  S+ 
Sbjct: 222 DLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGNQSIL 281

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            W    N  + L     R+ PT  E    R +  V
Sbjct: 282 LWMGKKNPYVNL----RRKIPTLNEGTIKRWIADV 312



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 17/210 (8%)

Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WG+  L G +G G +  S+           P+L+E    + +  IS G  H+  ++
Sbjct: 67  ELFAWGQN-LHGQLGIGRLFASIPT---------PQLVEHLSGVPLVQISAGKAHSMALS 116

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G ++ WG    G+LG         P LVE L    V+ ++CG   T  LT+ G+++T+
Sbjct: 117 MSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTF 176

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
           G   HG   +G   +++   PR L   L G+RV++VACG  HT A VS  G++F++G G 
Sbjct: 177 GAGKHGQ--LGHNSTQNELRPR-LVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGK 233

Query: 398 FGVLGHGNLQN--VSQPKEVESLRGLKVKS 425
            G LG+G   N  +  P ++ S   LK +S
Sbjct: 234 EGQLGNGGTHNQLIPLPMKLPSNEDLKFES 263



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 105/248 (42%), Gaps = 28/248 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   Q + Q K         +  + C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQCILQEK--------SIIQITC 54

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT--CVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG +      +PT   V  L     
Sbjct: 55  GDYHSLAL-----------SKGGELFAWGQNLHGQLG-IGRLFASIPTPQLVEHLSGVPL 102

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G+  ++ L+  G +Y+ G    GQLG           +   L  + V+ ++ G  
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGS 162

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-- 604
           H A+LT  G V+T+G   +GQLG   +Q    P  V  L   +V  V CG   T A    
Sbjct: 163 HTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSD 222

Query: 605 LHKSISVG 612
           L K  S G
Sbjct: 223 LGKVFSFG 230


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 37  IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 94

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 95  SHSLALSDQGQLFSWGAGSDGQ--LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G    G LG G    + + P+ V+SL G+ +  VA G  H+ A+      
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL------ 206

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D   +  P  V  L     V  SCG   T  LT  
Sbjct: 207 -----SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKS 261

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 262 GGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 322 CGARGQLGTGHTCNVKCPSPVKG 344



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 147/326 (45%), Gaps = 21/326 (6%)

Query: 283 VFCWGE---GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           + CWG    G  G +   +   V+ P+    +S  +++ V+CG   +  L + GE+YT G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G
Sbjct: 61  LNTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDG 115

Query: 400 VLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LGH   ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG 
Sbjct: 116 QLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWH-----------CMALAADGQFFTWGQ 164

Query: 459 ADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG
Sbjct: 165 NRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLG 224

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +  
Sbjct: 225 LSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEV 284

Query: 578 TPTFVEALRDRQVESVVCGSSITAAI 603
            P  V  L   +V  + CG   T A 
Sbjct: 285 NPRRVLELMGSEVTQIACGRQHTLAF 310



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+ + G+
Sbjct: 110 GAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQ 169

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 170 LGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDET 229

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+FG LGH ++ +   P
Sbjct: 230 DRQSPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNP 286

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 287 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 329


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADEHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    + +V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL   L   +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKL---LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 157/332 (47%), Gaps = 47/332 (14%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           + ++G I+T+G +        E  S   W+           R+  VACG+ HTA+V+ +G
Sbjct: 8   VPETGAIFTFGKSK-----FAENISSKFWIRND--------RICAVACGDEHTALVTENG 54

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +L+T+G   +G LG G+ +  S+P  V+SL+  K K VACG  HT              A
Sbjct: 55  RLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLI------------A 102

Query: 449 IG-GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD--FVQASCGRMLTVGLTGLGKV 505
            G GK++ WG   +G+LG   GE     T  T L+DFD   +  SCG   T  +T  G +
Sbjct: 103 TGDGKVYVWGGGSEGQLGL--GEDTTECTEPT-LLDFDSKAISVSCGYYHTAVVTEDGNL 159

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           YT G   +G+LG N    D S T  +    +E VK +  G  H   +   G+VYT+G  A
Sbjct: 160 YTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGA 219

Query: 565 NGQLGLGDS-QERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVG 612
           +GQLG G+S  E  TP  VE  RD   +   CG + TA I             H  + +G
Sbjct: 220 SGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLG 279

Query: 613 DQSSCSQCRMPFGFRRKKHNCYNCGLHFCSAC 644
           D+S  +Q R PF   R   N +      C  C
Sbjct: 280 DESFTNQFR-PFKVAR--FNKFQVQWVACGGC 308



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 127/257 (49%), Gaps = 25/257 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G +H ALVT+ G ++ +G    G+LG       S P  V+ L     + V+CG   T
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G++Y WG  + G   +GE  +         FD+    +   V+CG +HTA+V+ 
Sbjct: 100 LIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS----KAISVSCGYYHTAVVTE 155

Query: 387 SGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            G L+T+G+  +G LG  N  L +   P++V  ++  KVK V CG  HT AI        
Sbjct: 156 DGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAI-------- 206

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLT 500
              A  G ++T+G+   G+LGH +    LL    P  V R  D D   ASCG   T  +T
Sbjct: 207 ---AESGAVYTFGNGASGQLGHGN---SLLESPTPHRVERFRDADCKHASCGENFTAVIT 260

Query: 501 GLGKVYTMGSAVHGQLG 517
           G G +YT G   HG+LG
Sbjct: 261 GKGHLYTFGDGRHGKLG 277



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +V+CG+  T  +T++G +YT+G N+ G   +G  ++ S         +L   +   VACG
Sbjct: 39  AVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASK---PSCVKSLKHEKAKLVACG 95

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
             HT I +  G+++ +G G+ G LG G +    ++P  ++     K  SV+CG +HTA +
Sbjct: 96  RSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS--KAISVSCGYYHTAVV 153

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVD-FDFVQASCGR 493
            +            G L+T+G+ + G+LG  + D +    P  VT + +   FV   CG 
Sbjct: 154 TE-----------DGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFV--VCGG 200

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGKLKEEFVKGISSGSYHVAVL 551
             T  +   G VYT G+   GQLG+  +   S T   VE + ++   K  S G    AV+
Sbjct: 201 GHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVE-RFRDADCKHASCGENFTAVI 259

Query: 552 TSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
           T  G +YT+G   +G+LGLGD     +  P  V      QV+ V CG
Sbjct: 260 TGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACG 306



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 19/230 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++ G  H  + T +G+V+ WG G +G+LG  +   + + P L++  S     SVSCG + 
Sbjct: 92  VACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS--KAISVSCGYYH 149

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  +T+ G +YT+G   +G   +      S   P+K+    + V+   V CG  HT  ++
Sbjct: 150 TAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKF--VVCGGGHTTAIA 207

Query: 386 TSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            SG ++T+G+G  G LGHGN L     P  VE  R    K  +CG   TA I        
Sbjct: 208 ESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITGK----- 262

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGE--RKLLPTCVTRLVDFDFVQASCG 492
                 G L+T+GD   G+LG  D     +  P  V R   F     +CG
Sbjct: 263 ------GHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACG 306



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 2/152 (1%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G +  N + +D+       + +   V+ +  G  H   + + G V+ +G G  G+LGH  
Sbjct: 168 GKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGN 227

Query: 299 N-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
           + ++   P  VE     + +  SCGE  T  +T  G +YT+G   HG   +G+    + +
Sbjct: 228 SLLESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQF 287

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            P K+    +  +V  VACG  H  ++++  Q
Sbjct: 288 RPFKVA-RFNKFQVQWVACGGCHMMVIASPRQ 318


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVE 309
           L+P+L +  ++     IS G++H+  ++  G+V  WG+   G+LGH  + ++   PK+V 
Sbjct: 83  LIPELQDYVII----QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V   +  +H   P +L  TL G
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRL-TTLLG 197

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N + P ++++LR L V+ VAC
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVAC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 258 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+ L    G+VY  G    GQLG    K
Sbjct: 307 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 157/323 (48%), Gaps = 19/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G +H   +T  G+V+  G     +LGH  ++    P L+  L    +  +SCG 
Sbjct: 42  VEQVACGHRHTLFLTANGKVYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGS 99

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++ +WG N+ G   +G    +      K+   L    V ++ACG  H+  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQ--LGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLA 157

Query: 384 VSTSGQLFTYGDGTFGVLGHG---NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +++ G+L+++G   +G LG     +L + + P  + +L G+ + ++ACG  H+  I    
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI---- 213

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  +  G +F WG  + G+LG  D   +  PT +  L        +CG   +V LT
Sbjct: 214 -------SKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G VY 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 560 WGKNANGQLGLGDSQERETPTFV 582
           +G  ++GQLG   ++    P  V
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 146/332 (43%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       V+ V+CG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 340 HNNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N+H            H LP K   L   L    + +++CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDHS--------QLGHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+       C      G+L++
Sbjct: 118 DCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS-----C------GELYS 166

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+  + L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 167 WGSNIYGQLG-VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +R+       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 448 AIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+LG   ++ E+ L P+ +    D    Q +CG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKV 61

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  H QLG+     R + + E  L++  +  IS GS H   L+  G V +WG N  
Sbjct: 62  YACGSNDHSQLGHDLPTKRPLLIPE--LQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119

Query: 566 GQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG   D +  + P  V  L  + V  + CG++ + A+
Sbjct: 120 GQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERE--TPTFVEALRDRQVESVVCG 596
           + SG  +Y WG  ++GQLGLG  ++ +  TP+ +    D  VE V CG
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACG 48


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
               AL+  G++++WG  + G   +G   +       ++   L+   + +V+CG WH+  
Sbjct: 94  SHNLALSDRGQLFSWGAGSDGQ--LGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D E +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H   +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH+ A+           A  G+ FTWG  
Sbjct: 116 LGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLAL-----------AADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +DR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H  A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHNLALSD-----------RGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG   ++ L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P++++      +  +S G  H+  +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + +  
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEE 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 188/397 (47%), Gaps = 39/397 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSV--SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           V  WG G LG  +G    GSV  S  ++  + L PKL E+     + ++  GA H+A + 
Sbjct: 71  VYTWGNGTLG-QLG---HGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAID 126

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           +EG+++ WG  +  +LG   + ++ + P+ VE L GI +  VSCG++ T A+ + G++Y+
Sbjct: 127 EEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYS 186

Query: 338 WGHNN---HGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWHTAIVSTSGQLFTY 393
           WG       GA  +G    +    PR L   +D GV ++ V CGE+HT  ++  G+++ +
Sbjct: 187 WGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAW 246

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G+G +G LG+G       P+ +E      V S+A G   + A+ D            G+L
Sbjct: 247 GNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTD-----------KGEL 295

Query: 454 FTWGDADKGRLGHVDG------ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           ++WG   + +LG   G        + +P  V         Q + G      +T  G++Y 
Sbjct: 296 YSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYM 355

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G+ +         +   +T V     E  +  ++ G  +   LT  G V+T+GK ++  
Sbjct: 356 WGAKIW-------IEPHEMTAV----NEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNC 404

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           LG GD + +  P  ++AL    + SV CG     AI 
Sbjct: 405 LGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAIA 441



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)

Query: 324 FQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
            +T +      +YTWG+       HG+ +    RS    L  KL + L+G  ++ V  G 
Sbjct: 60  LRTASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGA 119

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGLKVKSVACGPWHTAAIV 437
            H+A +   G+L+ +G   +  LG G    + + P+EVE+L+G+K+  V+CG + TAA+ 
Sbjct: 120 SHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVD 179

Query: 438 DIMVDRCKSNAIGGKLFTWG---DADKGRLGHVDGERKLLPT--CVTRLVD--FDFVQAS 490
           +            GK+++WG      KG  G      K  PT   +T LVD         
Sbjct: 180 E-----------DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVE 228

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
           CG   TV LT  G+++  G+  +G+LGN ++    +        ++ V  I++G      
Sbjct: 229 CGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFA 288

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERET------PTFVEALRDRQVESVVCGSSITAAI 603
           LT  G +Y+WG N+  QLG+G     +       P  VEA     V+ +  G    AA+
Sbjct: 289 LTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAV 347


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 21/309 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+  + G +H+ L+  +G V   G+   G+LG +       P L++ L  + V  VSCG
Sbjct: 22  EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + A+   G ++ WG  + G   + E + +  + P+K+  TL G+++ +V+CG +H+ 
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKI-FTPKKI-KTLTGIKIIQVSCGHYHSL 139

Query: 383 IVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            +S  GQ++++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+     
Sbjct: 140 ALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 194

Query: 442 DRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                 ++ G  F WG  + G+L   G+    ++  P  +  L   D +  SCG   T  
Sbjct: 195 ------SLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAV 248

Query: 499 LTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGS 556
           LT  GKV+T G    GQLG NP AK R    VEG   +  V  I  GSYH +A + + G 
Sbjct: 249 LTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYTTGE 306

Query: 557 VYTWGKNAN 565
           V ++G+  N
Sbjct: 307 VVSFGRGRN 315



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 154/317 (48%), Gaps = 36/317 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P L+++   L V  +S G +H+  V  +G VF WG G +G+LG  +    +  PK ++ L
Sbjct: 64  PGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL 123

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  VSCG + + AL++ G++Y+WG N+ G   +G +   S   P+++  +L+G+ +
Sbjct: 124 TGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLG-KEFPSQASPQRV-RSLEGIPL 181

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G    G L   GN   V   +P  + +L+ L V  ++C
Sbjct: 182 AQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISC 241

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LG+    +K  P  V   +D    Q
Sbjct: 242 GYEHTAVLTQ-----------NGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG-IDGLVSQ 289

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK------------DRSITVVEGKLKEE 536
             CG   T     L  VYT G  V    G   A             D S  +    L + 
Sbjct: 290 IDCGSYHT-----LAYVYTTGEVVSFGRGRNCASSPTHSEAQMENFDMSCLISANDLVDV 344

Query: 537 FVKGISSGSYHVAVLTS 553
            VK I +G+Y V V+T+
Sbjct: 345 QVKHIFAGTY-VNVVTT 360



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 154/342 (45%), Gaps = 34/342 (9%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG G   R            ++     G  V+  +CGE  +  L   G +++ G N  
Sbjct: 3   FCWGNGGQLR------------RVPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGDNTQ 50

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R       P  L   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 51  GQ--LGRRGKPREERP-GLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 107

Query: 404 GNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
               + +  PK++++L G+K+  V+CG +H+ A+ +            G++++WG   +G
Sbjct: 108 EECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSE-----------DGQVYSWGKNSQG 156

Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GN 518
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL   GN
Sbjct: 157 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGN 216

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                R      G LK   V  IS G  H AVLT  G V+T+G N+ GQLG   + ++  
Sbjct: 217 NTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRG 276

Query: 579 PTFVEALRDRQVESVVCGSSITAAICLH--KSISVGDQSSCS 618
           P  VE + D  V  + CGS  T A      + +S G   +C+
Sbjct: 277 PQQVEGI-DGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRNCA 317



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 24/261 (9%)

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  V + ACGE H+ ++ + G + + GD T G LG        +P  +++L  L V  V+
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVS 79

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDF 486
           CG  H+ A+       C      G++F WG   +G+LG  + + K+  P  +  L     
Sbjct: 80  CGKEHSLAV-------CHK----GRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKI 128

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGI 541
           +Q SCG   ++ L+  G+VY+ G    GQLG  K     A  + +  +EG      +  +
Sbjct: 129 IQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIP----LAQV 184

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCGSS 598
           ++G  H   L+  G+ + WG N  GQL L  +    +R  P  + AL+   V  + CG  
Sbjct: 185 AAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYE 244

Query: 599 ITAAICLHKSISVGDQSSCSQ 619
            TA +  +  +     +SC Q
Sbjct: 245 HTAVLTQNGKVFTFGDNSCGQ 265



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +     PK +++   + +  +S G  H+  ++++G+V+ WG+   G+
Sbjct: 98  GAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQ 157

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG NN G   L G  
Sbjct: 158 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNN 217

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++ +G++FT+GD + G LG+        
Sbjct: 218 TPVQRYKPHSI-GALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRG 276

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P++VE + GL V  + CG +HT A V
Sbjct: 277 PQQVEGIDGL-VSQIDCGSYHTLAYV 301



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S N T V    P  + +   LDV  IS G +H A++T+ G+VF +G+   G+LG+   
Sbjct: 212 ALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPT 271

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
                P+ VE + G+ V  + CG + T A +  +GE+ ++G
Sbjct: 272 AKKRGPQQVEGIDGL-VSQIDCGSYHTLAYVYTTGEVVSFG 311


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 166/346 (47%), Gaps = 31/346 (8%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
            ++ G  H+ L  ++ +VF WG+G  GRLG     +   P +   +    VQ  S G   
Sbjct: 90  GVTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLH 146

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
             ALT+ G +YTWG+   GA  +G        LPR L +     R+  V+ G  HTA V+
Sbjct: 147 NIALTEVGNVYTWGYGAFGA--LGHGSYERELLPR-LLEGPWKDRIVHVSAGGSHTAAVT 203

Query: 386 TSGQLFTYG-DGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            SG+L+T+G D   G LGHGN        +S+P +V++L  + +  V CG + T A+   
Sbjct: 204 ESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFFTMALT-- 260

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                KS    G+L++WG      LGH        P  V  L D   VQ +CG      L
Sbjct: 261 -----KS----GQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           T  GKV T G   +GQLG+   ++     +   + ++    I+ G    A +T  G +YT
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYT 371

Query: 560 WGKNANGQLGL-GDSQERETPTFV---EALRDR---QVESVVCGSS 598
           WGKN + QLG+ G   E+  P  V   +AL ++   +V  V CG++
Sbjct: 372 WGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGAN 417



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 42/368 (11%)

Query: 280 EGEVFCWGEGKDGRLGH------KVNMDVSCPKLVECLSGINVQS------------VSC 321
           E EV+ WG G  G++GH      K+ + +S  KL        +Q             V+C
Sbjct: 34  ELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G F +    +  +++ WG  + G   +G     + + P   +      RV   + G  H 
Sbjct: 94  GLFHSVLFAEQ-DVFVWGKGDGGR--LGIDTEFNQYKP---YVNPRIKRVQMASAGGLHN 147

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             ++  G ++T+G G FG LGHG+ +    P+ +E     ++  V+ G  HTAA+ +   
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTE--- 204

Query: 442 DRCKSNAIGGKLFTWG-DADKGRLGH-----VDGERKLLPTCVTRLVDFDFVQASCGRML 495
                    G+L+TWG D  +GRLGH     +D      PT V  L D       CG   
Sbjct: 205 --------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFF 255

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           T+ LT  G++++ G   + +LG+    +     V   L++  +  ++ G +H A LT  G
Sbjct: 256 TMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDG 315

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQS 615
            V TWG   NGQLG G  +  + P  VEA+ D+    + CG + TAAI  +  +    ++
Sbjct: 316 KVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKN 375

Query: 616 SCSQCRMP 623
              Q  +P
Sbjct: 376 RDYQLGIP 383


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 21/325 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G KH   + ++G+V+  G   +G+LGH  + + + P  V  L+  +++ ++CG+
Sbjct: 36  VKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGH--SHEGTHPAPVATLAEEHIKHIACGQ 93

Query: 324 FQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             + AL+  G +Y+WG  N G       E  SR   +PR +   L   ++ +++CG+ H 
Sbjct: 94  SHSLALSLQGNLYSWGAGNDGQLGHATVEHYSR---IPR-IIKKLSQQKIQQMSCGDDHC 149

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
             +   GQLFT+G  T G LG GN   + S P++V+SL G+ +  V  G  H+ A+    
Sbjct: 150 LALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL---- 205

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  ++ G +F WG    G+LG  D + K  P  V  L     V  SCG   T  LT
Sbjct: 206 -------SLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILT 258

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G ++T G+   GQLG+    +        +L    V  I+ G  H +A + S G++Y 
Sbjct: 259 KAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYA 318

Query: 560 WGKNANGQLGLGDSQERETPTFVEA 584
           +G    GQLG G     + PT V+ 
Sbjct: 319 FGCGDLGQLGTGHENNVKCPTVVKG 343



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 144/325 (44%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG  H +   VS P          V+ V+CG   T  L + G++Y+ G 
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G     +H  P     TL    +  +ACG+ H+  +S  G L+++G G  G 
Sbjct: 61  NGEGQ--LGHSHEGTHPAPVA---TLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQ 115

Query: 401 LGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LGH  +++ S+ P+ ++ L   K++ ++CG  H  A+ D            G+LFTWG  
Sbjct: 116 LGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD-----------DGQLFTWGQN 164

Query: 460 DKGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG  +G   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 THGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              + +        L+   V  IS G  H A+LT  G ++T+G   +GQLG         
Sbjct: 225 NDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEIN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVSQIACGRKHTLAF 309



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 20/236 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     +  + +P++++      +Q +S G  H   +  +G++F WG+   G+
Sbjct: 109 GAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQ 168

Query: 294 LGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG     +  S P+ V+ L GI +  V+ G   + AL+ SG ++ WG N+ G   + + +
Sbjct: 169 LGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQ 228

Query: 353 SRS---HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
            +    H  P +        +V  ++CGE HTAI++ +G LFT+G G  G LGH +L N 
Sbjct: 229 VKETPCHVKPLRTH------KVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNE 282

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
             P+ V  L G +V  +ACG  HT A V             G L+ +G  D G+LG
Sbjct: 283 INPRRVLELMGSEVSQIACGRKHTLAFV----------PSSGTLYAFGCGDLGQLG 328



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 6/104 (5%)

Query: 509 GSAVHGQLGNPKAKDRSIT---VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           G +  GQLGN  +   +++        L    VK ++ G  H   L   G VY+ G N  
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLAT-CVKEVACGGKHTLFLMEDGQVYSCGWNGE 63

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           GQL  G S E   P  V  L +  ++ + CG S + A+ L  ++
Sbjct: 64  GQL--GHSHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNL 105


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 15/349 (4%)

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK-----DGRLGH 296
           S +   VD L PK +E+     V+++S G  H+ + TK+G +  +G G      DGRLGH
Sbjct: 89  SGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
                   P+ V  LSG+ +  V+ G   +  L+  G ++++G    G+  +G       
Sbjct: 149 GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGS--LGHGDQARQ 206

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P KL  +L   +V  +A G  H+ +V+ SG ++++G G+ G LGHG+      PK++E
Sbjct: 207 LVP-KLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIE 265

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
                    VA G  H+  +  + V   +     G++ ++G    G+LG +    +++ +
Sbjct: 266 HFVQRPAVKVAAGGSHSLVLSKLYVLEQE-----GRVLSFGQNSYGQLG-LGHFSRMIAS 319

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKE 535
                V+   V+   G   ++ LT  G+VY+ G A HGQLG+    +D     +   L+ 
Sbjct: 320 PAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLER 379

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
           E +  +++G+    VL++ G+V+++G   NG+LG GD      PT V A
Sbjct: 380 ERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFA 428



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 38/353 (10%)

Query: 295 GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV-----G 349
           GH  ++D   PK VE L+   V+ VS G + +   TK G + ++G+ +  A++V     G
Sbjct: 90  GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGS--ANVVVDGRLG 147

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
               R+  +PR +  +L GVR+ KVA G  H+ ++S  G +F++G G  G LGHG+    
Sbjct: 148 HGDQRTQMIPRPVL-SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
             PK + SL+  KV  +A G  H+  + +            G ++++G   +G LGH D 
Sbjct: 207 LVPKLISSLQREKVVDIAAGSAHSLVVAE-----------SGDVYSFGLGSEGALGHGDT 255

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL------GKVYTMGSAVHGQLGNPKAKD 523
           +  L+P  +   V    V+ + G   ++ L+ L      G+V + G   +GQLG      
Sbjct: 256 DMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSR 315

Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFV 582
              +  + +++   V+ I +G++H  VLT+ G VY++G   +GQLG G D ++   PT +
Sbjct: 316 MIASPAQVQVEAAAVE-IEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLI 374

Query: 583 EALRDRQVESVVCGSSITAAICLHKSI-----------SVGDQSSCSQCRMPF 624
           ++L   ++  V  G++ +  +    ++             GD+S+ +Q  + F
Sbjct: 375 QSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVF 427



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 141/289 (48%), Gaps = 25/289 (8%)

Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           VDG +     Q   ++P+ + S   + +  ++ GA H+ +++ +G VF +G G DG LGH
Sbjct: 142 VDGRLGHGD-QRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGH 200

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
                   PKL+  L    V  ++ G   +  + +SG++Y++G  + GA  +G   +   
Sbjct: 201 GDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGA--LGHGDTDMS 258

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVS------TSGQLFTYGDGTFGVLGHGNL-QNV 409
            +P+K+   +    V KVA G  H+ ++S        G++ ++G  ++G LG G+  + +
Sbjct: 259 LVPKKIEHFVQRPAV-KVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMI 317

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
           + P +V+ +    V+ +  G  H+  + +            G+++++G A  G+LGH + 
Sbjct: 318 ASPAQVQ-VEAAAVE-IEAGAHHSLVLTN-----------DGRVYSFGLAQHGQLGHGND 364

Query: 470 ER-KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            R    PT +  L     V  + G   ++ L+  G V++ G   +G+LG
Sbjct: 365 LRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLG 413


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 148/320 (46%), Gaps = 20/320 (6%)

Query: 283 VFCWGEGKDGRLGHK-VNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+LG   ++ ++   P+  E   G  V  V CG   T  L   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G  +SR    P  +   LD   +  V+CGE HT  ++  GQ+F++G G+ G 
Sbjct: 61  NDLGQ--LGHEKSRKK--PEHVV-ALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  N +  V  P+ ++ L  +++  VACG WH+ A+           + GG++F+WG  
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL-----------SKGGQVFSWGQN 164

Query: 460 DKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG  + G     P  +  L    F Q S G   +  +T  G V+  G    GQLG 
Sbjct: 165 QFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR    +   L+ + V  +S G  H A LT    V+T+G    GQLG   +     
Sbjct: 225 NDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEIN 284

Query: 579 PTFVEALRDRQVESVVCGSS 598
           P  V  L    V  + CGS+
Sbjct: 285 PRKVFELMGNVVTQISCGST 304



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 20/258 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V ++  G KH   +  +G V+  G    G+LGH+ +     P+ V  L    + +VSCGE
Sbjct: 36  VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKSR--KKPEHVVALDAQIIVAVSCGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T AL   G++++WG  ++G  L          +PR +   L  V++++VACG WH+  
Sbjct: 94  SHTLALNDKGQVFSWGLGSNG-QLGLNNFEECVRVPRNI-KCLSDVQIAQVACGYWHSHA 151

Query: 384 VSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +S  GQ+F++G   FG LG   HG+  ++S P+ ++SL+G+    ++ G  H+ AI    
Sbjct: 152 LSKGGQVFSWGQNQFGQLGLGMHGS--SISTPQIIQSLQGIPFAQLSAGGAHSFAI---- 205

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                   + G +F WG    G+LG  D + +  P  +  L     +  SCG   T  LT
Sbjct: 206 -------TLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALT 258

Query: 501 GLGKVYTMGSAVHGQLGN 518
            L  V+T G+  +GQLG+
Sbjct: 259 KLRGVFTFGAGGYGQLGH 276



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 134/275 (48%), Gaps = 24/275 (8%)

Query: 257 ESAVMLDVQNI---SLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLS 312
           E  V LD Q I   S G  H   +  +G+VF WG G +G+LG +     V  P+ ++CLS
Sbjct: 76  EHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLS 135

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            + +  V+CG + + AL+K G++++WG N  G   +G   S       ++  +L G+  +
Sbjct: 136 DVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFA 193

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ G  H+  ++ SG +F +G   FG LG  + ++   P  ++SLR  +V  V+CG  H
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDH 253

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TAA+  +             +FT+G    G+LGH     ++ P  V  L+     Q SCG
Sbjct: 254 TAALTKLR-----------GVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302

Query: 493 ------RMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
                 R   V  T LG V T  S V   L   KA
Sbjct: 303 STRWLLRPPLVRCTHLGSVVT-ASLVPVPLATEKA 336



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 25/300 (8%)

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG+ ++G   +G         PRK  +   G RV  V CG  HT  +   G ++T G   
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKC-EFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCND 62

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGH   ++  +P+ V +L    + +V+CG  HT A+ D            G++F+WG
Sbjct: 63  LGQLGHE--KSRKKPEHVVALDAQIIVAVSCGESHTLALND-----------KGQVFSWG 109

Query: 458 DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+LG  + E  + +P  +  L D    Q +CG   +  L+  G+V++ G    GQL
Sbjct: 110 LGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQL 169

Query: 517 G-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G        S   +   L+      +S+G  H   +T  G+V+ WGKN  GQLGL D+++
Sbjct: 170 GLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKD 229

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R  P  +++LR ++V  V CG   TAA+   + +               G+ +  HNC N
Sbjct: 230 RWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG---------GYGQLGHNCTN 280



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 4/197 (2%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +  N  +    +P+ ++    + +  ++ G  H+  ++K G+VF WG+ + G+
Sbjct: 109 GLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQ 168

Query: 294 LGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  ++   +S P++++ L GI    +S G   + A+T SG ++ WG N  G   +G   
Sbjct: 169 LGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQ--LGLND 226

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           ++  W P  L  +L   RV  V+CGE HTA ++    +FT+G G +G LGH    +   P
Sbjct: 227 TKDRWFP-ALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINP 285

Query: 413 KEVESLRGLKVKSVACG 429
           ++V  L G  V  ++CG
Sbjct: 286 RKVFELMGNVVTQISCG 302



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+   G  +G  + GS            P++++S   +    +S G  H+  +T  
Sbjct: 158 VFSWGQNQFG-QLGLGMHGSSIST--------PQIIQSLQGIPFAQLSAGGAHSFAITLS 208

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G VF WG+ K G+LG     D   P L++ L    V  VSCGE  T ALTK   ++T+G 
Sbjct: 209 GAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGA 268

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
             +G   +G   +     PRK+F+ +  V V++++CG
Sbjct: 269 GGYGQ--LGHNCTNHEINPRKVFELMGNV-VTQISCG 302


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 477 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 526

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP--- 359
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 527 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 580

Query: 360 RKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 581 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 640

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ D            G++++WGD D G+LG    +   
Sbjct: 641 AGLKGLKVIDVACGSGDAQTLAVTD-----------NGQVWSWGDGDYGKLGRGGSDGCK 689

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 690 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 748

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 749 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 808

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 809 IACGPAQSFA-----------WSSCSEWSIGLRVPF 833



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 467 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 521

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 522 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 567

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 568 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 616

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 617 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGD 676

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 677 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 736

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 737 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 783



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 669 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 718

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 719 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 778

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 779 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 812


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 262 LDVQNISL---GAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQ 317
           LD Q I+L   G  H+  V ++G+VF WG G  G+LG       V  P+L++ L    + 
Sbjct: 80  LDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIA 139

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF----DTLDGVRVSK 373
            V CG     AL+K G+++TWG N  G   +G+        P KLF     +L G+ ++K
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE------PSKLFPQPLKSLAGIPLAK 193

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +  G  H+  +S SG +F +G    G LG  ++Q+ + P  ++ LR  KV  ++CG  HT
Sbjct: 194 ITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHT 253

Query: 434 AAIVDIMV-----------DRCKS----NAIG----------------GKLFTWGDADKG 462
           AA+  + +            RC +      IG                G LFT+GD   G
Sbjct: 254 AALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWG 313

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPK- 520
           +LGH     +LLP  V  L+  +  Q +CGR  T+      G VY  G   HGQLG  + 
Sbjct: 314 QLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGEL 373

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           + ++ +  V+  L         S  Y V  +T GG
Sbjct: 374 SAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGG 408



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 152/366 (41%), Gaps = 61/366 (16%)

Query: 283 VFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           + CWG+ KDG+LG +V  + +  P+     SG  ++   CG   +  L   G +YT G N
Sbjct: 1   MLCWGKAKDGQLGIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSN 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
             G   +G  +  +     +L   LD  R++ V+CG+ H+  V+  GQ+F +G G  G L
Sbjct: 61  --GCGQLGHNKPGT---SPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQL 115

Query: 402 GHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G G  +  V  P+ ++ L   ++  V CG  H           C + +  G+LFTWG   
Sbjct: 116 GLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQH-----------CIALSKDGQLFTWGQNT 164

Query: 461 KGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            G+LG   GE  KL P  +  L      + + G   +  L+  G V+  G    GQLG  
Sbjct: 165 SGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLN 224

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVL-------------TSG------------ 554
             +DR++      L+ + V  IS G  H A L             TSG            
Sbjct: 225 DIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRI 284

Query: 555 -----------------GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
                            G ++T+G  + GQLG G +     P  V  L   +V  + CG 
Sbjct: 285 GCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGR 344

Query: 598 SITAAI 603
             T A 
Sbjct: 345 HHTLAF 350



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 167/387 (43%), Gaps = 44/387 (11%)

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    G  L  E    S + PR   +   G  + +  CG  H+  +   G ++T G   
Sbjct: 4   WGKAKDG-QLGIEVERNSMFEPRNC-NVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSNG 61

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LGH   +  + P+ V +L   ++  V+CG  H+ A+ +            G++F WG
Sbjct: 62  CGQLGHN--KPGTSPELVGALDTQRITLVSCGQAHSMAVNE-----------QGQVFAWG 108

Query: 458 DADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
             D G+LG    E  + +P  + RL D    Q  CG    + L+  G+++T G    GQL
Sbjct: 109 AGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQL 168

Query: 517 GNPKAKDRSITVVEGK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           G  K +   +     K L    +  I++G  H   L+  G+V+ WGKN  GQLGL D Q+
Sbjct: 169 GLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQD 228

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYN 635
           R  P  ++ LR ++V  + CG   TAA+     + +    S SQC     FR     C N
Sbjct: 229 RAVPCHIKFLRSQKVVHISCGDEHTAAL---TKVRI---RSASQC-----FRTSGGRCSN 277

Query: 636 CGLHFCS--AC--STKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQENQSPRN 691
               FC    C  ST+  I   L  + G  +   D  +  L   + S  LL      PR 
Sbjct: 278 P--FFCQRIGCSHSTRVTILLWLFQDGGLFT-FGDGSWGQLGHGSTSNELL------PRR 328

Query: 692 LLNLQGSLSEEV---KEEKGALTPSRG 715
           +L L G+   ++   +    A  PS G
Sbjct: 329 VLELMGTEVSQITCGRHHTLAFAPSSG 355



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 149/347 (42%), Gaps = 59/347 (17%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+  +  +G V+  G    G+LGH  N   + P+LV  L    +  VSCG+  + A+
Sbjct: 41  GGQHSVFLLHDGSVYTCGSNGCGQLGH--NKPGTSPELVGALDTQRITLVSCGQAHSMAV 98

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            + G+++ WG  + G   +G   +    +PR L   L   R+++V CG  H   +S  GQ
Sbjct: 99  NEQGQVFAWGAGDGGQLGLGTTEAAVR-IPR-LIKRLCDHRIAQVMCGNQHCIALSKDGQ 156

Query: 390 LFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           LFT+G  T G LG G  +     P+ ++SL G+ +  +  G  H+ A+           +
Sbjct: 157 LFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFAL-----------S 205

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL------ 502
           + G +F WG    G+LG  D + + +P  +  L     V  SCG   T  LT +      
Sbjct: 206 LSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSAS 265

Query: 503 ------------------------------------GKVYTMGSAVHGQLGNPKAKDRSI 526
                                               G ++T G    GQLG+    +  +
Sbjct: 266 QCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELL 325

Query: 527 TVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGD 572
                +L    V  I+ G +H +A   S G VY +G N++GQLG G+
Sbjct: 326 PRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGE 372



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 67/306 (21%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G  GG +G           T+    +P+L++      +  +  G +H   ++K+
Sbjct: 104 VFAWGAGD-GGQLG--------LGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKD 154

Query: 281 GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G++F WG+   G+LG  K       P+ ++ L+GI +  ++ G   + AL+ SG ++ WG
Sbjct: 155 GQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWG 214

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS-------------- 385
            N  G   + + + R+  +P  +   L   +V  ++CG+ HTA ++              
Sbjct: 215 KNKAGQLGLNDIQDRA--VPCHI-KFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTS 271

Query: 386 ----------------------------TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
                                         G LFT+GDG++G LGHG+  N   P+ V  
Sbjct: 272 GGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLE 331

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL--GHVDGERKLLP 475
           L G +V  + CG  HT A               G ++ +G    G+L  G +  E+ L P
Sbjct: 332 LMGTEVSQITCGRHHTLAFA----------PSSGVVYAFGGNSHGQLGTGELSAEKCLYP 381

Query: 476 TCVTRL 481
             +  L
Sbjct: 382 VKINLL 387


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 147/317 (46%), Gaps = 16/317 (5%)

Query: 247 QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           QV +  P++L+ A+   V++++ G  H+A+V   GEV CWGE K G+ G         P 
Sbjct: 14  QVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPT 73

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
            V  L G+   SVSCG   T  +++ G +++WG   +G    G   SR +     +   +
Sbjct: 74  FVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG---SRDNLTTPSVVQAM 130

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
            G  V  V CG  HT IV   G+L+T G    G  G G+  ++  P+ VESLRG  V+  
Sbjct: 131 RGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHA 190

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +             GG++FT+G    G+LGH D +   +P  V  LV    
Sbjct: 191 SCGAGHTAVVTG-----------GGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVM 239

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK--LKEEFVKGISSG 544
              +CG   TV      +V+  G    GQLG        ++       LKEE V+     
Sbjct: 240 SMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCN 299

Query: 545 SYHVAVLTSGGSVYTWG 561
              V  LT  G++  WG
Sbjct: 300 QSEVIALTRRGALRAWG 316



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 152/323 (47%), Gaps = 19/323 (5%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG+     +G +V+   S P++++   G  V+ V+CG   +  +  SGE+  WG N 
Sbjct: 1   VYFWGQAGS-AVGEQVSS--STPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENK 57

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
           +G    G +    H        +L GV    V+CG  HT +VS  G++F++G G  G LG
Sbjct: 58  YGQCGTGTQEQTEH---PTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLG 114

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           HG+  N++ P  V+++RG  V +V CG  HT  ++            GG+L+T G    G
Sbjct: 115 HGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVL-----------AGGELYTCGWNKNG 163

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           + G       L P CV  L       ASCG   T  +TG G+V+T GS   GQLG+   +
Sbjct: 164 QCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQ 223

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE--RETPT 580
           D S+    G L    +  ++ G  +         V+ +G N  GQLG   +       P 
Sbjct: 224 DLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPR 283

Query: 581 FVEALRDRQVESVVCGSSITAAI 603
            +E L++ +VE   C  S   A+
Sbjct: 284 QMEFLKEEEVELCKCNQSEVIAL 306



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 131/246 (53%), Gaps = 24/246 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V+ WGE   G        G+ +Q +T+    +  L   A M    ++S G  H  +V++
Sbjct: 49  EVLCWGENKYG------QCGTGTQEQTEHPTFVGSLFGVACM----SVSCGGAHTVVVSE 98

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           +G VF WG G +G+LGH    +++ P +V+ + G +V +V+CG   T  +   GE+YT G
Sbjct: 99  DGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCG 158

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N +G   VG   S S  L  +  ++L G  V   +CG  HTA+V+  G++FT+G G+ G
Sbjct: 159 WNKNGQCGVG---STSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCG 215

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHG+ Q++S P+ V +L G+ +  VACG  +T              A   ++F +G  
Sbjct: 216 QLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCA-----------AFDHRVFGFGLN 264

Query: 460 DKGRLG 465
           + G+LG
Sbjct: 265 NVGQLG 270



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 11/210 (5%)

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
           S P+ ++   G +V+ VACG  H+A ++             G++  WG+   G+ G    
Sbjct: 18  STPRMLKKAMGRQVRDVACGLVHSAMVMG-----------SGEVLCWGENKYGQCGTGTQ 66

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
           E+   PT V  L     +  SCG   TV ++  G+V++ G   +GQLG+    + +   V
Sbjct: 67  EQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSV 126

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
              ++   V  ++ G  H  ++ +GG +YT G N NGQ G+G + +  +P  VE+LR   
Sbjct: 127 VQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEG 186

Query: 590 VESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           V+   CG+  TA +     +      SC Q
Sbjct: 187 VQHASCGAGHTAVVTGGGEVFTFGSGSCGQ 216


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 138/275 (50%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+L +  ++     IS G++H+  ++  G+V  WG+   G+LGH    + V  PK+V 
Sbjct: 83  LIPELQDYVII----QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V      +H   P +L  TL G
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRL-TTLLG 197

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N + P ++++LR L V+ VAC
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVAC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 258 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+ L    GKVY  G    GQLG    K
Sbjct: 307 VACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTK 341



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 33/371 (8%)

Query: 219 KDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           K++  WG    G LG  +GG  D  +         L P+ +       VQ ++ G +H  
Sbjct: 5   KELYCWGSTSHGQLG--LGGIEDEQI---------LTPRQIPWTPDTAVQQVACGHRHTL 53

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            +T  G+V+  G     +LGH  ++    P+L+  L    +  +SCG   + AL+  G++
Sbjct: 54  FLTATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQV 111

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            +WG N+ G   +G    +      K+   L    V ++ACG  H+  +++ G+L+++G 
Sbjct: 112 LSWGDNDCGQ--LGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169

Query: 396 GTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
             +G LG     +L + + P  + +L G+ + ++ACG  H+  I           +  G 
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI-----------SKSGA 218

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +F WG  + G+LG  D   +  PT +  L        +CG   +V LT  G V+T G+  
Sbjct: 219 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLG 571
           +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G VY +G  ++GQLG  
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTR 338

Query: 572 DSQERETPTFV 582
            ++    P  V
Sbjct: 339 STKSLMLPQVV 349



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P+ +       VQ V+CG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 340 HNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++   G DL  +R         +L   L    + +++CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDYSQLGHDLPTKRP--------QLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+              G+L++
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC-----------GELYS 166

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+    L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 167 WGSNIYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +R+       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 16/191 (8%)

Query: 448 AIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+  LG ++ E+ L P  +    D    Q +CG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  + QLG+     R   + E  L++  +  IS GS H   L+  G V +WG N  
Sbjct: 62  YACGSNDYSQLGHDLPTKRPQLIPE--LQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119

Query: 566 GQLGLGDSQE-RETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVGD 613
           GQLG    +E  + P  V  L  + V  + CG++ + A+            ++  + V  
Sbjct: 120 GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 614 QSSCSQCRMPF 624
            +  + C  P 
Sbjct: 180 PNDLTHCNYPL 190


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 16/319 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCG 322
           +Q IS G  H   ++  G ++  G  + G+LG + N  D + P LV+   G  + +++CG
Sbjct: 37  IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACG 96

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              + AL + G+ ++WG ++ G   +G           K+  TL    V +VACG +HT 
Sbjct: 97  LQHSMALDEWGQPFSWGSDSMGQ--LGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTV 154

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           +++ +G L+ +G  ++G  G GN  N  + P+ + S+ G+ +  +ACG  HT A+     
Sbjct: 155 VLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFAL----- 209

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                 +  G +F WG    G+LG  D E +  PT +  L +      SCG   T  LT 
Sbjct: 210 ------SQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTL 263

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G V+T G+  +GQ G+   KD  +     +L    V  ++ G  H+ +   G  +   G
Sbjct: 264 DGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHM-LCRVGERILACG 322

Query: 562 KNANGQLGLGDSQERETPT 580
             A GQLG         PT
Sbjct: 323 YGARGQLGCPHMAFALVPT 341



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 15/282 (5%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G + +     D   P L+++     +  I+ G +H+  + + G+ F WG    G+LG  +
Sbjct: 65  GQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNL 124

Query: 299 NMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
                  PK+++ L+  NV  V+CG + T  LT +G++Y WG N++G   +G  RS    
Sbjct: 125 GSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLG-NRSNKET 183

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P+ L   L G+ ++ +ACG  HT  +S SG +F +G  + G LG  + ++   P  +++
Sbjct: 184 TPQALSSIL-GIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKT 242

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           LR +KV  ++CG   TA +            + G +FT G  + G+ GH + + +L+P  
Sbjct: 243 LRNVKVCHISCGEDFTAFL-----------TLDGGVFTCGAGEYGQTGHGNTKDELVPRK 291

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           V  L+     Q +CGR   +   G  ++   G    GQLG P
Sbjct: 292 VMELMGSTVTQVACGRRHMLCRVG-ERILACGYGARGQLGCP 332



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 144/320 (45%), Gaps = 20/320 (6%)

Query: 283 VFCWGEGKDGRLGHKV--NMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           +FCWG      L  +   N+D+   P L +     ++Q +S GEF T  L+ +G +YT G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N  G   +G + + +      L DT  G  +S +ACG  H+  +   GQ F++G  + G
Sbjct: 61  SNEVGQ--LGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMG 118

Query: 400 VLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            LG  NL + +Q  PK +++L    V  VACG +HT  + +            G L+ WG
Sbjct: 119 QLG-SNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTN-----------NGDLYAWG 166

Query: 458 DADKGRLGHVD-GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
               G+ G  +   ++  P  ++ ++       +CG   T  L+  G V+  G   HGQL
Sbjct: 167 ANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQL 226

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G    + R        L+   V  IS G    A LT  G V+T G    GQ G G++++ 
Sbjct: 227 GLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDE 286

Query: 577 ETPTFVEALRDRQVESVVCG 596
             P  V  L    V  V CG
Sbjct: 287 LVPRKVMELMGSTVTQVACG 306



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 136/258 (52%), Gaps = 27/258 (10%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG   +G  +G  + GS +Q+K       PK++++    +V  ++ G+ H  ++T  G++
Sbjct: 112 WGSDSMG-QLGSNL-GSHAQDK-------PKIIKTLATKNVIQVACGSYHTVVLTNNGDL 162

Query: 284 FCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           + WG    G+  LG++ N + + P+ +  + GI +  ++CG   T AL++SG ++ WG N
Sbjct: 163 YAWGANSYGQCGLGNRSNKETT-PQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKN 221

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           +HG   + +R SR +  P  L  TL  V+V  ++CGE  TA ++  G +FT G G +G  
Sbjct: 222 SHGQLGLQDRESRCY--PTHL-KTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQT 278

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           GHGN ++   P++V  L G  V  VACG  H           C+   +G ++   G   +
Sbjct: 279 GHGNTKDELVPRKVMELMGSTVTQVACGRRHML---------CR---VGERILACGYGAR 326

Query: 462 GRLGHVDGERKLLPTCVT 479
           G+LG       L+PT VT
Sbjct: 327 GQLGCPHMAFALVPTPVT 344



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 24/244 (9%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVAC 428
            + +++ GE+HT  +S +G L+T G    G LG   N  + + P  V++ +G  + ++AC
Sbjct: 36  HIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIAC 95

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVD 483
           G  H+ A+ +            G+ F+WG    G+LG     H   + K++ T  T+ V 
Sbjct: 96  GLQHSMALDE-----------WGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNV- 143

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGI 541
              +Q +CG   TV LT  G +Y  G+  +GQ  LGN   K+ +   +   L    +  I
Sbjct: 144 ---IQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIP-IALI 199

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           + GS H   L+  G+V+ WGKN++GQLGL D + R  PT ++ LR+ +V  + CG   TA
Sbjct: 200 ACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTA 259

Query: 602 AICL 605
            + L
Sbjct: 260 FLTL 263



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 11/178 (6%)

Query: 453 LFTWGDADKGRL-----GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
           +F WG+A    L     G++D   K  PT           Q S G   T+ L+  G +YT
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIK--PTLSKWKESSHIQQISAGEFHTLYLSNNGHLYT 58

Query: 508 MGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            GS   GQLG    + D +  V+    K   +  I+ G  H   L   G  ++WG ++ G
Sbjct: 59  CGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMG 118

Query: 567 QLG--LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRM 622
           QLG  LG S  ++ P  ++ L  + V  V CGS  T  +  +  +     +S  QC +
Sbjct: 119 QLGSNLG-SHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGL 175


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 30/307 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
           + +++ G  H+  ++  G++F WG G DG+LG     D V+ P+L++ L+   +  VSCG
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            +   AL   G+ +TWG N+HG   +G +   S   P+++  +L+G+ +++VA G  H+ 
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIPLAQVAAGGAHSF 203

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S SG +F +G    G LG  + ++   P  V+ LR  KV  ++CG  HTA +      
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---- 259

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-G 501
                   G +FT+G    G+LGH     ++ P  V  L+  +  Q +CGR  T+     
Sbjct: 260 -------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312

Query: 502 LGKVYTMGSAVHGQLG-----NPK----------AKDRSITVVEGKLKEEFVKGISSGSY 546
            G +Y  G    GQLG     N K          A    +T    + K   VK I SG  
Sbjct: 313 SGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGD 372

Query: 547 HVAVLTS 553
              VL S
Sbjct: 373 QTFVLCS 379



 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 130/240 (54%), Gaps = 25/240 (10%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +V CGE HT +V   G+LF++G   +G LGH   +  ++P  V+ L    +  VACG 
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGA 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT--CVTRLVDFDFVQ 488
            HT A  +            G++F WG    G+LG ++ E  ++PT   V  L     VQ
Sbjct: 94  QHTLAQNE-----------WGEVFAWGSNSNGQLG-LNVEESMMPTPKMVKSLATKQVVQ 141

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISS 543
            +CGR  ++ LT +G++Y  GS  HGQLG      P+ K   + +++G      +  IS 
Sbjct: 142 IACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIP----ISHISC 197

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+     +T  G+VY WGKN+ GQLGLGD+ +R  PT +++LR ++V  + CG   TAA+
Sbjct: 198 GADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 146/325 (44%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +FCWG  K G LG     +  ++ P+        ++  V CGE  T  + K G+++++G 
Sbjct: 1   MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G   +G  RSR+   P    D L+   +++VACG  HT   +  G++F +G  + G 
Sbjct: 61  NDYGQ--LGHCRSRTRAEP---VDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQ 115

Query: 401 LGHGNLQNV-SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    +++   PK V+SL   +V  +ACG  H+ A+ ++           G+++ WG  
Sbjct: 116 LGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNV-----------GEIYCWGSN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG    G  +  P  V  L        SCG   +  +T  G VY  G    GQLG 
Sbjct: 165 SHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               DR        L+ + V  I  G  H A LT  G V+T+G    GQLG   S     
Sbjct: 225 GDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEML 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L    V  + CG   T A 
Sbjct: 285 PRKVLELMGTTVTQICCGRCHTLAF 309



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 133/307 (43%), Gaps = 65/307 (21%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-------------------------- 296
           D+  +  G  H  LV K+G++F +G    G+LGH                          
Sbjct: 35  DIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGLEAHNITQVACGAQ 94

Query: 297 --------------------KVNMDVS-----CPKLVECLSGINVQSVSCGEFQTCALTK 331
                               ++ ++V       PK+V+ L+   V  ++CG   + ALT 
Sbjct: 95  HTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTN 154

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            GEIY WG N+HG   +G   S +      L   L G+ +S ++CG   +  V+ SG ++
Sbjct: 155 VGEIYCWGSNSHGQ--LGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVY 212

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            +G  +FG LG G+  +  QP +++SLR  +V  + CG  HTAA+              G
Sbjct: 213 GWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTR-----------DG 261

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVYTMGS 510
            +FT+G    G+LGH     ++LP  V  L+     Q  CGR  T+      G++Y  G 
Sbjct: 262 GVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGL 321

Query: 511 AVHGQLG 517
              GQLG
Sbjct: 322 GGSGQLG 328



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 17/243 (6%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WGE    G      +G +  N  +     PK+++S     V  I+ G  H+  +T  GE+
Sbjct: 102 WGEVFAWGS---NSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEI 158

Query: 284 FCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           +CWG    G+LG        + P LV+ L GI +  +SCG   + A+T SG +Y WG N+
Sbjct: 159 YCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNS 218

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G+   R    P +L  +L   RV+ + CG  HTA ++  G +FT+G G +G LG
Sbjct: 219 FGQLGLGDTTDRPQ--PTQL-KSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLG 275

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           H    N   P++V  L G  V  + CG  HT A V             G+++ +G    G
Sbjct: 276 HCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFV----------PSKGRIYAFGLGGSG 325

Query: 463 RLG 465
           +LG
Sbjct: 326 QLG 328


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 425 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 474

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 475 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 528

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 529 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 588

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 589 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 637

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 638 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 696

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 697 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 756

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 757 IACGPAQSFA-----------WSSCSEWSIGLRVPF 781



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 469

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 470 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 515

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 516 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 564

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 565 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 624

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 625 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 684

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 685 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 731



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 581 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 640

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 641 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 692

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 693 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 749

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 750 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 786



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 617 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 666

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 726

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 727 NDQCQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 760


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 159/341 (46%), Gaps = 21/341 (6%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM------DVS 303
            ++P+ ++ +   +V  +  G  H   +TKEG+++  G    G+LGH ++        +S
Sbjct: 24  VMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMS 83

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
             K +  L    +  +SCG   + ALT  G++++WG N  G   +G           ++ 
Sbjct: 84  RFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ--LGHDAENGRQPTPRMI 141

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLK 422
             +    V ++A G++H   ++ +G+L+ +G  ++G LG G   + V  P  ++SL G+ 
Sbjct: 142 KAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVP 201

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           +  +ACG  H+ A+        KS AI    F WG    G+LG  D   +  PT +  L 
Sbjct: 202 IAFIACGGNHSFAV-------SKSGAI----FGWGKNTFGQLGLNDLNSRCYPTQLRTLR 250

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
                  SCG   +V LT  G V+T G+   GQLG+    +  +     +L    +  I+
Sbjct: 251 SLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIA 310

Query: 543 SGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            G  H +A + S G +Y +G    GQLG+G      TP  V
Sbjct: 311 CGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 24/331 (7%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG    G LG        V  P+ ++      V  V CG   T  LTK G++Y  G+
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 341 NNHG-----ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           N+HG      D +  +R R     R    +L+   ++ ++CG  H+  ++  GQ+F++G 
Sbjct: 63  NDHGQLGHDLDTLPNKRPRMSRFKR--LTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120

Query: 396 GTFGVLGHGNLQNVSQP--KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
              G LGH + +N  QP  + ++++    V  +A G +H  A+ +            G+L
Sbjct: 121 NAVGQLGH-DAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTN-----------NGEL 168

Query: 454 FTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           + WG    G+LG     E+  +PT +  L        +CG   +  ++  G ++  G   
Sbjct: 169 YAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNT 228

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            GQLG      R        L+   V+ IS G      LT+ G V+T G    GQLG G 
Sbjct: 229 FGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGS 288

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
                 P  V  L   ++  + CG   T A 
Sbjct: 289 CSNEIVPRKVFELMGSKITQIACGRRHTLAF 319


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------QGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 153/362 (42%), Gaps = 25/362 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG+    G +G   DG+ +   T V   LP          +  ++ G  H+  +T  
Sbjct: 59  VLAWGDN-FSGQLG---DGTTTARSTPVTVGLPA------GTTITALAAGGSHSLALTDT 108

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V  WG    G+LG     D S P  V   +G  + +++ G   + ALT +G +  WG 
Sbjct: 109 GVVLAWGSNSRGQLGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGS 168

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G    G   +RS  +   L     G  ++ +A   +  A+  T G    +G  + G 
Sbjct: 169 NSNGQLGDGTTTARSTPVTVGLPA---GTTITALAASTYSLALTDT-GAALAWGSNSRGQ 224

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G   + S P  V    G  + ++A    H+ A+ D            G +  WG   
Sbjct: 225 LGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDT-----------GAVLAWGSNS 273

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG      +  P  V           + GR  T+ LT  G V   GS  +GQLG+  
Sbjct: 274 NGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGT 333

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
             DRS  V  G      +  +++G YH   LT  G+V  WG N+ GQLG G + +R TP 
Sbjct: 334 TTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTDRSTPV 393

Query: 581 FV 582
            V
Sbjct: 394 TV 395



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 121/314 (38%), Gaps = 31/314 (9%)

Query: 221 VMIWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           V+ WG    G LG       DG+ +   T V   LP          +  ++ G +H+  +
Sbjct: 111 VLAWGSNSRGQLG-------DGTTTDRSTPVTVGLPA------GTTITALAAGRRHSLAL 157

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G V  WG   +G+LG       S P  V   +G  + +++   +   ALT +G    
Sbjct: 158 TDTGAVLAWGSNSNGQLGDGTTTARSTPVTVGLPAGTTITALAASTYS-LALTDTGAALA 216

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N+ G    G    RS  +   L     G  ++ +A    H+  ++ +G +  +G  +
Sbjct: 217 WGSNSRGQLGDGTTTDRSTPVTVSLPA---GTTITALAASYDHSLALTDTGAVLAWGSNS 273

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G LG G   N S P  V    G  + ++A G  HT  +              G +  WG
Sbjct: 274 NGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTS-----------AGAVLAWG 322

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG      +  P  V           + G   ++ LT  G V   G   +GQLG
Sbjct: 323 SNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382

Query: 518 NPKAKDRSITVVEG 531
           +    DRS  V  G
Sbjct: 383 DGTTTDRSTPVTVG 396



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 122/306 (39%), Gaps = 19/306 (6%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +  WG N  G    G   +RS  +   L     G  ++ +A G  H+  ++ +G +  +
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVTVGLPA---GTTITALAAGGSHSLALTDTGVVLAW 114

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G  + G LG G   + S P  V    G  + ++A G  H+ A+ D            G +
Sbjct: 115 GSNSRGQLGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDT-----------GAV 163

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
             WG    G+LG  DG      T VT  L     + A      ++ LT  G     GS  
Sbjct: 164 LAWGSNSNGQLG--DGTTTARSTPVTVGLPAGTTITALAASTYSLALTDTGAALAWGSNS 221

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            GQLG+    DRS  V         +  +++   H   LT  G+V  WG N+NGQLG G 
Sbjct: 222 RGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGT 281

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHN 632
           +  R TP  V       + ++  G S T  + L  + +V    S S  ++  G    +  
Sbjct: 282 TTNRSTPVTVGLPAGTTITALAAGRSHT--LVLTSAGAVLAWGSNSNGQLGDGTTTDRST 339

Query: 633 CYNCGL 638
               GL
Sbjct: 340 PVTVGL 345


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 27/340 (7%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G  H+A VT++G +F +G+   G+LG ++   V+ P  V+ L G   QSV+CG   
Sbjct: 38  HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T  GEI   G N+ G   +G       +  ++L    D   +  ++ G+  +A ++
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G LG GN  +   P+E+    G  +  V+CG  H+A + D       
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPQELN--MGQSIHWVSCGYRHSALVTD------- 206

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGE--RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G ++T+G++  GRLG    +      P  V  L     +Q +CG   T+ LT   
Sbjct: 207 ----SGDVYTFGESADGRLGLSAHQLANHSYPQRVESL--RSVLQVACGGKHTLALTE-D 259

Query: 504 KVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           ++Y  G    GQLG        D  + V  G  +++ V  ++ G  H A++T  G +YT+
Sbjct: 260 ELYCFGGGEFGQLGLGMLVFVADSPVAV--GHFRKDRVTHVTCGEQHSALITDSGLLYTF 317

Query: 561 GKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSS 598
           G   +G+LG GD     + TPT  +   +  V +V CGSS
Sbjct: 318 GDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 125/266 (46%), Gaps = 37/266 (13%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
            Q+++ G  H  + T +GE+   G   DG+LG    N  +S  +L        ++ +S G
Sbjct: 88  AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGVRVSKVACGEWHT 381
           +  + ALT+ G ++ WG N+ G    G   + SH  LP++L     G  +  V+CG  H+
Sbjct: 148 DHTSAALTEDGRLFLWGDNSAGQLGFG---NDSHALLPQELN---MGQSIHWVSCGYRHS 201

Query: 382 AIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           A+V+ SG ++T+G   DG  G+  H  L N S P+ VESLR   V  VACG  HT A+ +
Sbjct: 202 ALVTDSGDVYTFGESADGRLGLSAH-QLANHSYPQRVESLRS--VLQVACGGKHTLALTE 258

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGH------VDGERKLLPTCVTRLVDFDFVQASCG 492
                        +L+ +G  + G+LG        D      P  V           +CG
Sbjct: 259 ------------DELYCFGGGEFGQLGLGMLVFVADS-----PVAVGHFRKDRVTHVTCG 301

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGN 518
              +  +T  G +YT G   HG+LG+
Sbjct: 302 EQHSALITDSGLLYTFGDGRHGKLGH 327



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 18/125 (14%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +FT+G   K ++ +    R  L + +        V  SCG+  +  +T  G+++  G 
Sbjct: 11  GAVFTFG---KSKIANSAPSRLWLKSDIP-------VHISCGQSHSAFVTEQGRLFVFGD 60

Query: 511 AVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              GQLG     P  K   + V++G    E  + ++ G+ H  V TS G +   G N++G
Sbjct: 61  NNRGQLGLQIKGPVTKPVCVKVLKG----ERAQSVACGTDHTLVSTSQGEILAAGGNSDG 116

Query: 567 QLGLG 571
           QLGLG
Sbjct: 117 QLGLG 121



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           LK +    IS G  H A +T  G ++ +G N  GQLGL        P  V+ L+  + +S
Sbjct: 31  LKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQS 90

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ-----CRMPFGFRRKKHNCYNCGLHFCSA 643
           V CG+  T        I     +S  Q     C     F+R +  C    +   SA
Sbjct: 91  VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSA 146


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 151/299 (50%), Gaps = 21/299 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+  +G V   G+   G+LG K       P+ +  L  +NV  VSCG+  + A+
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  + ++P+K+  TL G+++ +VACG +H+  +S  GQ
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETT-FIPKKI-KTLAGIKIIQVACGHYHSVALSEDGQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG    G+L   G+    ++  P  +  L     V  SCG   T  LT  GKV
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           +T G   +GQLG +P A+ R   +VE    E  V  I  GS H +A + + G V ++G+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 33/308 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P+ + +   L+V  +S G +H+  V  +G VF WG   +G+LG  +       PK ++ L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  V+CG + + AL++ G++++WG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 183

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G  + G L   GN   V   +P  + +L+ L V S++C
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LGH     K  P  V R+      Q
Sbjct: 244 GYKHTAVLTQ-----------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQ 291

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAK--DRSITVVEGKLKEEFV 538
             CG   T     L  +YT G  V    G        +P A+  D S  V    L +  V
Sbjct: 292 IDCGSDHT-----LAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQV 346

Query: 539 KGISSGSY 546
           K I +G+Y
Sbjct: 347 KHIFAGTY 354



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 141/298 (47%), Gaps = 20/298 (6%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
           C  G  +   + GE  +  L   G + + G N+ G   +G + +     P ++   L+ +
Sbjct: 19  CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERI-PALETL 75

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVAC 428
            V+ V+CG+ H+  V   G++F +G  + G LG G  +  +  PK++++L G+K+  VAC
Sbjct: 76  NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVAC 135

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
           G +H+ A+ +            G++F+WG    G+LG   +   +  P  V  L      
Sbjct: 136 GHYHSVALSE-----------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 184

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSG 544
           Q + G   +  L+  G  +  GS   GQL   GN     R   V  G LK   V  IS G
Sbjct: 185 QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H AVLT  G V+T+G N+ GQLG   + E+  P  VE + +  V  + CGS  T A
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLA 301



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G A +G +   + +    +PK +++   + +  ++ G  H+  ++++G+VF WG    G+
Sbjct: 100 GAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG N+ G   L G  
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++  G++FT+GD ++G LGH        
Sbjct: 220 APVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG  HT A +
Sbjct: 279 PQLVERIEGL-VSQIDCGSDHTLAYI 303



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S N   V    P  + +   L V +IS G KH A++T++G+VF +G+   G+LGH   
Sbjct: 214 ALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
            +   P+LVE + G+ V  + CG   T A +  +G++ ++G
Sbjct: 274 AEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S G+V + G N+ GQLG   +   E P  + AL    V  V CG   + 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 396 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 445

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 446 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 499

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 500 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 559

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 560 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 608

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 609 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 667

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 668 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 727

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 728 IACGPAQSFA-----------WSSCSEWSIGLRVPF 752



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 386 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 440

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 441 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 486

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 487 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 535

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 536 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 595

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 596 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 655

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 656 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 702



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 552 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 611

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 612 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 663

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 664 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 720

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 721 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 757



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+G+V
Sbjct: 591 WGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 640

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG N+ 
Sbjct: 641 YSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 700

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
                  R ++    P  L   LD   +  +ACG
Sbjct: 701 CQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 731


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 151/299 (50%), Gaps = 21/299 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+  +G V   G+   G+LG K       P+ +  L  +NV  VSCG+  + A+
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  + ++P+K+  TL G+++ +VACG +H+  +S  GQ
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETT-FIPKKI-KTLAGIKIIQVACGHYHSVALSEDGQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG    G+L   G+    ++  P  +  L     V  SCG   T  LT  GKV
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           +T G   +GQLG +P A+ R   +VE    E  V  I  GS H +A + + G V ++G+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 33/308 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P+ + +   L+V  +S G +H+  V  +G VF WG   +G+LG  +       PK ++ L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  V+CG + + AL++ G++++WG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 183

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G  + G L   GN   V   +P  + +L+ L V S++C
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LGH     K  P  V R+      Q
Sbjct: 244 GYKHTAVLTQ-----------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQ 291

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAK--DRSITVVEGKLKEEFV 538
             CG   T     L  +YT G  V    G        +P A+  D S  V    L +  V
Sbjct: 292 IDCGSDHT-----LAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQV 346

Query: 539 KGISSGSY 546
           K I +G+Y
Sbjct: 347 KHIFAGTY 354



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 141/298 (47%), Gaps = 20/298 (6%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
           C  G  +   + GE  +  L   G + + G N+ G   +G + +     P ++   L+ +
Sbjct: 19  CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERI-PALETL 75

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVAC 428
            V+ V+CG+ H+  V   G++F +G  + G LG G  +  +  PK++++L G+K+  VAC
Sbjct: 76  NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVAC 135

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
           G +H+ A+ +            G++F+WG    G+LG   +   +  P  V  L      
Sbjct: 136 GHYHSVALSE-----------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 184

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSG 544
           Q + G   +  L+  G  +  GS   GQL   GN     R   V  G LK   V  IS G
Sbjct: 185 QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H AVLT  G V+T+G N+ GQLG   + E+  P  VE + +  V  + CGS  T A
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLA 301



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G A +G +   + +    +PK +++   + +  ++ G  H+  ++++G+VF WG    G+
Sbjct: 100 GAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG N+ G   L G  
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++  G++FT+GD ++G LGH        
Sbjct: 220 APVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG  HT A +
Sbjct: 279 PQLVERIEGL-VSQIDCGSDHTLAYI 303



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S N   V    P  + +   L V +IS G KH A++T++G+VF +G+   G+LGH   
Sbjct: 214 ALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
            +   P+LVE + G+ V  + CG   T A +  +G++ ++G
Sbjct: 274 AEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 43.1 bits (100), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S G+V + G N+ GQLG   +   E P  + AL    V  V CG   + 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 154/321 (47%), Gaps = 26/321 (8%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSC 321
            +Q+I+ G +   ++ K+G VF  G  K G+ G   N D  +  P  +  LSGI +  V+ 
Sbjct: 3168 IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIG-NFDERLIVPSPIPALSGIPITMVAA 3226

Query: 322  --GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
              G     A++  G +Y+WG+N+ G   +G   S+SH  PR +    +   ++  A    
Sbjct: 3227 SNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSH-TPRVIESLREKYFITFAAVSYH 3285

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            H+A+VS +G L T+G    G LG  + Q+   P+ VE+L   KV  VACG +HT AIVD 
Sbjct: 3286 HSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD- 3344

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLG--HVDGER-----KLLPTCVTRLVDF--DFVQAS 490
                       G ++++G  + G+LG  H    +     K+ P   T ++D     VQ  
Sbjct: 3345 ----------DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVY 3394

Query: 491  CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            CG   TV +   GKV T G   +GQLG    + +SI           VK  S G YH  +
Sbjct: 3395 CGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLL 3454

Query: 551  LTSGGSVYTWGKNANGQLGLG 571
            L   G    +G+N  GQLG+ 
Sbjct: 3455 LLVNGRPMVFGRNNKGQLGVA 3475



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 149/313 (47%), Gaps = 25/313 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSV-- 319
           ++ +  G +  A++T +G V   G  K G+ GH  N D  V   + ++ L    V+ +  
Sbjct: 383 IRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHG-NFDERVMLLRPIQALRSHRVKYINA 441

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           S G     A+T +G  Y+WG+N+ G  L  E      +LP KL +++   ++   A    
Sbjct: 442 SNGCEHLIAITDTGLAYSWGYNDRG-QLGHENVGTKLYLP-KLIESIKEKKMKSAAVSYH 499

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           H+A+VS SG+L+T+G    G LG  + Q+ S P+ V++L G  V  V+CG +H       
Sbjct: 500 HSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCT-- 557

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT---RLVDFDFVQASCGRMLT 496
                    I G++FT G  D G+LG    ++  +PT V     LV F     +CG    
Sbjct: 558 ---------ISGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNELVCF----VACGYYHA 604

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
             +T  G  Y+ G   +GQLG      ++I +         +   + G YH  +++  G 
Sbjct: 605 TAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQ 664

Query: 557 VYTWGKNANGQLG 569
           V+ +G+N  GQLG
Sbjct: 665 VFVFGRNNKGQLG 677



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 17/272 (6%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCGEF 324
           N S G +H   +T  G  + WG    G+LGH+ V   +  PKL+E +    ++S +    
Sbjct: 440 NASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYH 499

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            +  ++ SGE+YT+G N+ G   +G   ++    P +L   L G  VS V+CG +H  + 
Sbjct: 500 HSALVSVSGELYTFGMNDCGQ--LGLDHTQHQSTP-QLVKALLGHHVSMVSCGLYHMVLC 556

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           + SG++FT G    G LG G+ + V  P +V  L    V  VACG +H  AI        
Sbjct: 557 TISGEVFTCGKNDHGQLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAITST----- 610

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G  +++G  D G+LG      + +P  +T   +   V A+CG   T+ ++  G+
Sbjct: 611 ------GLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQ 664

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           V+  G    GQLGN    D S+  V  K++ E
Sbjct: 665 VFVFGRNNKGQLGNRGNTD-SLLPVPLKVRPE 695



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 15/238 (6%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G +          LPKL+ES     +++ ++   H+ALV+  GE++ +G    G+LG   
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDH 525

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
               S P+LV+ L G +V  VSCG +     T SGE++T G N+HG   +G  +     +
Sbjct: 526 TQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK--V 583

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           P ++   L    V  VACG +H   ++++G  +++G   +G LG G+  + + P  +   
Sbjct: 584 PTQV--VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTIS 641

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
              ++   ACG +HT  + D            G++F +G  +KG+LG+      LLP 
Sbjct: 642 SNTRMVHAACGCYHTLLMSD-----------SGQVFVFGRNNKGQLGNRGNTDSLLPV 688



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 41/331 (12%)

Query: 281 GEVFCWGEGKDGRLGHKVNMD----VSCP-----KLVECLSGINVQSV--SCGEFQTCAL 329
           GE++  G+   G LG   +++     S P      + + +SG  + ++  S G   TC L
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGL 407

Query: 330 TKSGEIYTWGHNNHGADLVGER---RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            KSG+    GH N    ++  R     RSH            V+    + G  H   ++ 
Sbjct: 408 NKSGQC---GHGNFDERVMLLRPIQALRSH-----------RVKYINASNGCEHLIAITD 453

Query: 387 SGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           +G  +++G    G LGH N+   +  PK +ES++  K+KS A    H+A +         
Sbjct: 454 TGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALV--------- 504

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
             ++ G+L+T+G  D G+LG    + +  P  V  L+       SCG    V  T  G+V
Sbjct: 505 --SVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEV 562

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +T G   HGQLG    K   +   +  L  E V  ++ G YH   +TS G  Y++G+N  
Sbjct: 563 FTCGKNDHGQLGLGHNKQVKVPT-QVVLPNELVCFVACGYYHATAITSTGLTYSFGRNDY 621

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           GQLG+G    +  P  +    + ++    CG
Sbjct: 622 GQLGIGSKIHQNIPIALTISSNTRMVHAACG 652



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 19/275 (6%)

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           GE+Y+ G N++G   +G+   R H L        D +R  +V  G    AI+++ G + T
Sbjct: 348 GELYSCGQNSYGELGLGDDIER-HQLTSVPLCGWDHIR--QVVSGNEILAILTSDGVVLT 404

Query: 393 YGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAI 449
            G    G  GHGN  + V   + +++LR  +VK +    G  H  AI D           
Sbjct: 405 CGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDT---------- 454

Query: 450 GGKLFTWGDADKGRLGHVD-GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
            G  ++WG  D+G+LGH + G +  LP  +  + +     A+     +  ++  G++YT 
Sbjct: 455 -GLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTF 513

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQLG    + +S   +   L    V  +S G YH+ + T  G V+T GKN +GQL
Sbjct: 514 GMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQL 573

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG +++ + PT V  L +  V  V CG     AI
Sbjct: 574 GLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAI 607



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 150/348 (43%), Gaps = 41/348 (11%)

Query: 248  VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPK 306
            V + +P L  S + + +   S G +H   ++ +G V+ WG    G+LG    +  S  P+
Sbjct: 3209 VPSPIPAL--SGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPR 3266

Query: 307  LVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
            ++E L     +   +     +  ++ +G++ T+G N+ G   +G   ++    P +L +T
Sbjct: 3267 VIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQ--LGLDHTQHQHTP-QLVET 3323

Query: 366  LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--------S 417
            L   +V +VACG +HT  +   G ++++G   +G LG  + QN   P  V+         
Sbjct: 3324 LSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPM 3383

Query: 418  LRGL-KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L  + K   V CG +HT  I++            GK+ TWG  D G+LG    E K +  
Sbjct: 3384 LDAVNKAVQVYCGYYHTVTILEC-----------GKVVTWGRNDYGQLGIGSKEHKSIAQ 3432

Query: 477  CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-----PKAKDRSITVVEG 531
             V   +     +ASCG   T+ L   G+    G    GQLG      P A       +  
Sbjct: 3433 FVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVASRSLPSADLPLPIPLHP 3492

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
               +E V  IS+G Y   +LT        GK AN QL        E P
Sbjct: 3493 LSSDEVVY-ISAGFYCSYILT--------GKEANDQLQAMGGNPTENP 3531



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 24/294 (8%)

Query: 315  NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            ++QS++ G      L K G ++T G N  G   +G    R   +P  +   L G+ ++ V
Sbjct: 3167 SIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERL-IVPSPI-PALSGIPITMV 3224

Query: 375  AC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPW 431
            A   G  H   +S  G ++++G    G LG G   + S  P+ +ESLR     + A   +
Sbjct: 3225 AASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSY 3284

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
            H +A+V        SN   G L T+G  D G+LG    + +  P  V  L      + +C
Sbjct: 3285 HHSAVV--------SN--NGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVAC 3334

Query: 492  GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV-------EGKLKEEFVKGISS- 543
            G   TV +   G VY+ G   +GQLG    ++  + ++          + +   K +   
Sbjct: 3335 GLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVY 3394

Query: 544  -GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
             G YH   +   G V TWG+N  GQLG+G  + +    FV      +V+   CG
Sbjct: 3395 CGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCG 3448



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 22/223 (9%)

Query: 389  QLFTYGDGTFG--VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            ++F+ G   +G   LGH N  N  +     S +   ++S+A G      +V +M D    
Sbjct: 3134 EIFSCGQNNYGELCLGHCNPTNKLERASFFSYKS--IQSIAGG---NEVLVVLMKD---- 3184

Query: 447  NAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTGL 502
                G +FT G    G+  +G+ D ER ++P+ +  L  +    V AS G    + ++  
Sbjct: 3185 ----GAVFTCGLNKSGQCGIGNFD-ERLIVPSPIPALSGIPITMVAASNGCEHMLAISHD 3239

Query: 503  GKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G VY+ G    GQLG     +K  +  V+E   ++ F+   +   +H AV+++ G + T+
Sbjct: 3240 GAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF 3299

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G N +GQLGL  +Q + TP  VE L  ++V  V CG   T AI
Sbjct: 3300 GMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAI 3342



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 25/271 (9%)

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            S S   F+ C      EI++ G NN+G   +G     ++ L R  F +   ++   +A G
Sbjct: 3124 STSSPMFEEC------EIFSCGQNNYGELCLGHCNP-TNKLERASFFSYKSIQ--SIAGG 3174

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVAC--GPWHTA 434
                 ++   G +FT G    G  G GN  + +  P  + +L G+ +  VA   G  H  
Sbjct: 3175 NEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHML 3234

Query: 435  AIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQ-ASCG 492
            AI           +  G +++WG  D+G+LG      +   P  +  L +  F+  A+  
Sbjct: 3235 AI-----------SHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVS 3283

Query: 493  RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
               +  ++  G + T G    GQLG    + +    +   L  + V  ++ G YH   + 
Sbjct: 3284 YHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIV 3343

Query: 553  SGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
              G VY++GKN  GQLGL  +Q  + P  V+
Sbjct: 3344 DDGDVYSFGKNEYGQLGLSHTQNTKVPMLVK 3374


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 151/299 (50%), Gaps = 21/299 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+  +G V   G+   G+LG K       P+ +  L  +NV  VSCG+  + A+
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  + ++P+K+  TL G+++ +VACG +H+  +S  GQ
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETT-FIPKKI-KTLAGIKIIQVACGHYHSVALSEDGQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG    G+L   G+    ++  P  +  L     V  SCG   T  LT  GKV
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           +T G   +GQLG +P A+ R   +VE    E  V  I  GS H +A + + G V ++G+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 33/308 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P+ + +   L+V  +S G +H+  V  +G VF WG   +G+LG  +       PK ++ L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  V+CG + + AL++ G++++WG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 183

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G  + G L   GN   V   +P  + +L+ L V S++C
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LGH     K  P  V R+      Q
Sbjct: 244 GYKHTAVLTQ-----------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQ 291

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAK--DRSITVVEGKLKEEFV 538
             CG   T     L  +YT G  V    G        +P A+  D S  V    L +  V
Sbjct: 292 IDCGSDHT-----LAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQV 346

Query: 539 KGISSGSY 546
           K I +G+Y
Sbjct: 347 KHIFAGTY 354



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 141/298 (47%), Gaps = 20/298 (6%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
           C  G  +   + GE  +  L   G + + G N+ G   +G + +     P ++   L+ +
Sbjct: 19  CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERI-PALETL 75

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVAC 428
            V+ V+CG+ H+  V   G++F +G  + G LG G  +  +  PK++++L G+K+  VAC
Sbjct: 76  NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVAC 135

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
           G +H+ A+ +            G++F+WG    G+LG   +   +  P  V  L      
Sbjct: 136 GHYHSVALSE-----------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 184

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSG 544
           Q + G   +  L+  G  +  GS   GQL   GN     R   V  G LK   V  IS G
Sbjct: 185 QVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H AVLT  G V+T+G N+ GQLG   + E+  P  VE + +  V  + CGS  T A
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLA 301



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G A +G +   + +    +PK +++   + +  ++ G  H+  ++++G+VF WG    G+
Sbjct: 100 GAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG N+ G   L G  
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNN 219

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++  G++FT+GD ++G LGH        
Sbjct: 220 APVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG  HT A +
Sbjct: 279 PQLVERIEGL-VSQIDCGSDHTLAYI 303



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S N   V    P  + +   L V +IS G KH A++T++G+VF +G+   G+LGH   
Sbjct: 214 ALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
            +   P+LVE + G+ V  + CG   T A +  +G++ ++G
Sbjct: 274 AEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S G+V + G N+ GQLG   +   E P  + AL    V  V CG   + 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 97

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 98  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 155

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 156 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 209

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 210 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 264

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 265 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 324

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 325 CGARGQLGTGHTCNVKCPSPVKG 347



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 5   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 64

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 65  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 119

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 120 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 168

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 169 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 228

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 229 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 288

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 289 PRRVLELMGSEVTQIACGRQHTLAF 313



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 97

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 98  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 146

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 147 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 202

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 203 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 263 KSGGVFTFGAGSCGQ 277



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 113 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 172

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 173 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 232

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 233 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 289

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 290 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 332


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 30/307 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
           + +++ G  H+  ++  G++F WG G DG+LG     D V+ P+L++ L+   +  VSCG
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            +   AL   G+ +TWG N+HG   +G +   S   P+++  +L+G+ +++VA G  H+ 
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIPLAQVAAGGAHSF 203

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S SG +F +G    G LG  + ++   P  V+ LR  KV  ++CG  HTA +      
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---- 259

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-G 501
                   G +FT+G    G+LGH     ++ P  V  L+  +  Q +CGR  T+     
Sbjct: 260 -------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312

Query: 502 LGKVYTMGSAVHGQLG-----NPK----------AKDRSITVVEGKLKEEFVKGISSGSY 546
            G +Y  G    GQLG     N K          A    +T    + K   VK I SG  
Sbjct: 313 SGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGD 372

Query: 547 HVAVLTS 553
              VL S
Sbjct: 373 QTFVLCS 379



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   ++   V+ P++   +S   V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 425 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 474

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 475 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 528

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 529 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 588

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 589 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 637

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 638 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 696

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 697 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 756

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 757 IACGPAQSFA-----------WSSCSEWSIGLRVPF 781



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 469

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 470 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 515

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 516 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 564

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 565 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 624

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 625 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 684

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 685 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 731



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAAL--VTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 581 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 640

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 641 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 692

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 693 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 749

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 750 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 786



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+G+V
Sbjct: 620 WGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 669

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG N+ 
Sbjct: 670 YSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 729

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
                  R ++    P  L   LD   +  +ACG
Sbjct: 730 CQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 760


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 172/353 (48%), Gaps = 50/353 (14%)

Query: 253 PKLLESAVMLDVQNISLGAKHA-ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           P ++++     +  +S G  H+ A   + G V+ WG G +GRLG++    V  P+++ECL
Sbjct: 151 PTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLECL 210

Query: 312 S-----GINVQSVSCGEFQTCAL----------TKSGEIYTWGHNN------------HG 344
                  + V  +SCGE  T AL          T   +++ WG+N+            + 
Sbjct: 211 KIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNN 270

Query: 345 ADLVGERR-SRSHWL-PRKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTF 398
            D+   R  S  H L P       D    S     V    +++A ++++G ++T+G G F
Sbjct: 271 EDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEF 330

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LG+ +++   QPK ++ L G +V  ++ G +H AAI +            G++F+WG 
Sbjct: 331 GRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITE-----------QGQVFSWGR 379

Query: 459 ADKGRLGH--VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
              G+LGH  V  E ++ P  V+ L +   +  SCG   T+ LT  G+VY+ G    GQL
Sbjct: 380 GINGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLALTNKGEVYSWGGGQLGQL 437

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           G+     +S+ +    L E+ +  IS+G  H + LT  G ++TWG N  GQLG
Sbjct: 438 GHGDFLRQSLPIKVANL-EDNIAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 44/382 (11%)

Query: 263 DVQNISLGAKHAALVTK--EGEVFCWGEGKDGRLGHKVNMD------------VSCPKLV 308
           ++  +  G+     +TK  E  VF WG  ++ +LGH                 V  P +V
Sbjct: 95  NINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIV 154

Query: 309 ECLSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHGADLVGERRSRSHWLPRKL----F 363
           + L    +  +SCG   + A + +SG +Y WG   +G   +G         P+ L     
Sbjct: 155 KALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGR--LGNENEGVVQEPQVLECLKI 212

Query: 364 DTLDGVRVSKVACGEWHT-AIV---------STSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
                ++V +++CGE HT A++         ++  +LF +G+     LG  N Q     +
Sbjct: 213 AMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDN-QADGNNE 271

Query: 414 EVESLRGLKV-KSVACGPW--------HTAAIVDIMVDRCKSNAI--GGKLFTWGDADKG 462
           +++S R + V   +   P+        ++  ++ +      S A+   G ++TWG  + G
Sbjct: 272 DMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSGEFG 331

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           RLG++D +++  P  +  L  F   + S G      +T  G+V++ G  ++GQLG+    
Sbjct: 332 RLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVL 391

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           +         L+   +  IS G  H   LT+ G VY+WG    GQLG GD   +  P  V
Sbjct: 392 NEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKV 451

Query: 583 EALRDRQVESVVCGSSITAAIC 604
             L D  +  +  G   ++A+ 
Sbjct: 452 ANLEDN-IAQISAGKRHSSALT 472


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 21/371 (5%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           LLP  +E      VQ I+ G +H   +T  G+V+  G     +LGH++      P  +  
Sbjct: 25  LLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP--IPE 82

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L    V  ++CG   + ALT+ G+I +WG N+ G   VG           K+   L    
Sbjct: 83  LQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ--VGHSTDNDVIELPKILRFLVSRT 140

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVA 427
           V ++ACG  H+  +++ G+L+++G   +G LG     +L + + P  + ++ G+ + ++A
Sbjct: 141 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIA 200

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H+  I        KS+A+    F WG    G+LG  D + +  P+ +  +      
Sbjct: 201 CGGNHSFLI-------SKSSAV----FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR 249

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             +CG   +V LT  G V+T G+  +GQLG+  + +  I  +  +L    +  ++ G+ H
Sbjct: 250 FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRH 309

Query: 548 -VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA--AIC 604
            +A++ SGG VY++G  A+GQLG  ++  +  P  V         S +  SS  A  ++ 
Sbjct: 310 TLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWVSPNGSALMESSEGADKSVV 369

Query: 605 LHKSISVGDQS 615
           + K  S GDQS
Sbjct: 370 IRKIFSGGDQS 380



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 18/273 (6%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +Y WG  +HG   +G   +    LP ++    D   V ++ACG  HT  ++ +GQ++  G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYACG 61

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +     LGH       +P  +  L+   V  +ACG  H+ A+ +            G++ 
Sbjct: 62  NNDHHQLGHE--LPTKRPLPIPELQAYVVIQIACGSRHSMALTE-----------WGQIL 108

Query: 455 TWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +WGD D G++GH  D +   LP  +  LV    VQ +CG   ++ LT  G++Y+ GS ++
Sbjct: 109 SWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIY 168

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           GQLG    KD   +    +L       +  I+ G  H  +++   +V+ WGKN  GQLGL
Sbjct: 169 GQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGL 228

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            D Q R  P+ ++++R   V  V CG   +  +
Sbjct: 229 NDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 146/332 (43%), Gaps = 30/332 (9%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG+   G+LG     N  +  P  +E      VQ ++CG   T  LT +G++Y  G+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 341 NNHGADLVGERRSRSHWLPRKL---FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N+H            H LP K       L    V ++ACG  H+  ++  GQ+ ++GD  
Sbjct: 63  NDH--------HQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 398 FGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G +GH    +V + PK +  L    V  +ACG  H+ A+       C      G+L++W
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS-----C------GELYSW 163

Query: 457 GDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           G    G+LG V   + L     P  +T ++       +CG   +  ++    V+  G   
Sbjct: 164 GSNIYGQLG-VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            GQLG    ++R+       ++   V+ ++ G  +   LT+ G V+T G    GQLG G 
Sbjct: 223 CGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGA 282

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S     P  V  L    +  V CG+  T A+ 
Sbjct: 283 SNNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG+   G  +G + D  V +        LPK+L   V   V  I+ G  H+  +T  
Sbjct: 107 ILSWGDNDCG-QVGHSTDNDVIE--------LPKILRFLVSRTVVQIACGNNHSLALTSC 157

Query: 281 GEVFCWGEGKDGRLGHKVNMDV---SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           GE++ WG    G+LG +   D+   + P  +  + GI + +++CG   +  ++KS  ++ 
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG 217

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG N  G   + + ++R++    K   TL GVR   V CG+ ++  ++  G +FT G G 
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTL-GVRF--VTCGDEYSVFLTNEGGVFTCGAGN 274

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           +G LGHG   N   P+ V  L G  +  VACG  HT A+V            GG+++++G
Sbjct: 275 YGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALV----------PSGGRVYSFG 324

Query: 458 DADKGRLGHVDGERKLLPTCV 478
               G+LG  +   + LP  V
Sbjct: 325 LGASGQLGTRNTISQTLPKVV 345


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 55/396 (13%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 434 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 483

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-- 360
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 484 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 537

Query: 361 -KLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597

Query: 416 ESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 646

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 647 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 705

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + +  
Sbjct: 706 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVG 765

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ----CRMPF 624
           + CG + + A            SSCS+     R+PF
Sbjct: 766 IACGPAQSFA-----------WSSCSEWSIGLRVPF 790



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 479 -------------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT-GEVYSWGCGDG 524

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 573

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 634 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 740



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 32/217 (14%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHA--ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           D  +P L+     L V +++ G+  A    VT+ G+V+ WG+G  G+LG   +     PK
Sbjct: 590 DEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK 649

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRK 361
           L+E L  ++V  V CG   + ALTK G++Y+WG  +     HG +         H    K
Sbjct: 650 LIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE--------EHVRYPK 701

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           L + L G +V  VA G  H   ++   ++ ++G        H +   V++P E  +L GL
Sbjct: 702 LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKP-EPAALPGL 758

Query: 422 KVK---SVACGP-----------WHTAAIVDIMVDRC 444
             K    +ACGP           W     V  +VD C
Sbjct: 759 DTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDIC 795



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+G+V
Sbjct: 629 WGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQV 678

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG N+ 
Sbjct: 679 YSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 738

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
                  R ++    P  L   LD   +  +ACG
Sbjct: 739 CQHFDTLRVTKPE--PAAL-PGLDTKHIVGIACG 769


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 159/339 (46%), Gaps = 43/339 (12%)

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
           + +++ S P+LV+ L GIN  SV+ G  Q   +++SGE+Y WG N+ G    G+RR  S 
Sbjct: 94  ETSLESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDAS- 152

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-------- 408
            +PR +   L G  V  VAC + HT      G  + +G    G LG   L          
Sbjct: 153 -VPR-VVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGV 210

Query: 409 ---------------------VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
                                V  P+ +ESL G  +  VACG +HTA +   + ++ K++
Sbjct: 211 SAPPGAPTKGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLG--VYEQHKTS 268

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
                LFT G    GRLGH D E + LPT V  L + +    +CG   T  +T  G +Y 
Sbjct: 269 -----LFTCGLGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLYM 323

Query: 508 MGSAVHGQLGNPKAKDRSITV--VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            G A  G+LG    +   +    V G L+ + V  ++ GS H A +T+ G +YTWG+   
Sbjct: 324 WGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR 383

Query: 566 -GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G    G+S E   P  VEAL    V  VVCG + TA I
Sbjct: 384 LGHEVQGESDEF-LPRRVEALVGLFVIHVVCGDAHTACI 421



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 180/406 (44%), Gaps = 60/406 (14%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           +T +++  P+L+++   ++  +++ G    A+V++ GE++ WG   +G+LG     D S 
Sbjct: 94  ETSLESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASV 153

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG------HNNHGADL---VGERRSRS 355
           P++V+ L G  V+ V+C +  T      G  Y WG         HG  +    G   S  
Sbjct: 154 PRVVKALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAP 213

Query: 356 HWLPRK-----------------LFDTLDGVRVSKVACGEWHTAIVSTSGQ----LFTYG 394
              P K                 + ++L G  ++ VACG +HTA +    Q    LFT G
Sbjct: 214 PGAPTKGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCG 273

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            G  G LGHG+ ++   P  V +L  L + ++ACG  HTA +             GG L+
Sbjct: 274 LGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTS-----------GGTLY 322

Query: 455 TWGDADKGRLGHVDGER--KLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYT---- 507
            WG A  G+LG +   R  +LLP  V   L +   V  + G   +  +T  G++YT    
Sbjct: 323 MWGGAAFGKLG-LGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQG 381

Query: 508 --MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             +G  V G+       D  +      L   FV  +  G  H A +   G+V+ WG +  
Sbjct: 382 RRLGHEVQGE------SDEFLPRRVEALVGLFVIHVVCGDAHTACIVENGNVWAWGTSR- 434

Query: 566 GQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
             LG GD +     P+ + AL  + V  + C  + TAA C  + +S
Sbjct: 435 -ILGHGDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCDPQRVS 479


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 180/371 (48%), Gaps = 21/371 (5%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           LLP  +E      VQ I+ G +H   +T  G+V+  G     +LGH++      P  +  
Sbjct: 25  LLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP--IPE 82

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L    V  ++CG   + ALT+ G+I +WG N+ G   VG           K+   L    
Sbjct: 83  LQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQ--VGHSTDNDVIELPKILRFLVSRT 140

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVA 427
           V ++ACG  H+  +++ G+L+++G   +G LG     +L + + P  + ++ G+ + ++A
Sbjct: 141 VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIA 200

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H+  I        KS+A+    F WG    G+LG  D + +  P+ +  +      
Sbjct: 201 CGGNHSFLI-------SKSSAV----FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVR 249

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             +CG   +V LT  G V+T G+  +GQLG+  + +  I  +  +L    +  ++ G+ H
Sbjct: 250 FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRH 309

Query: 548 -VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA--AIC 604
            +A++ SGG VY++G  A+GQLG  ++  +  P  V         S +  SS  A  ++ 
Sbjct: 310 TLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWVSPSGSALMESSEGADKSVV 369

Query: 605 LHKSISVGDQS 615
           + K  S GDQS
Sbjct: 370 IRKIFSGGDQS 380



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 18/273 (6%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +Y WG  +HG   +G   +    LP ++    D   V ++ACG  HT  ++ +GQ++  G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYACG 61

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +     LGH       +P  +  L+   V  +ACG  H+ A+ +            G++ 
Sbjct: 62  NNDHHQLGHE--LPTKRPLPIPELQAYVVIQIACGSRHSMALTE-----------WGQIL 108

Query: 455 TWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +WGD D G++GH  D +   LP  +  LV    VQ +CG   ++ LT  G++Y+ GS ++
Sbjct: 109 SWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIY 168

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           GQLG    KD   +    +L       +  I+ G  H  +++   +V+ WGKN  GQLGL
Sbjct: 169 GQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGL 228

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            D Q R  P+ ++++R   V  V CG   +  +
Sbjct: 229 NDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 146/332 (43%), Gaps = 30/332 (9%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG+   G+LG     N  +  P  +E      VQ ++CG   T  LT +G++Y  G+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 341 NNHGADLVGERRSRSHWLPRKL---FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N+H            H LP K       L    V ++ACG  H+  ++  GQ+ ++GD  
Sbjct: 63  NDH--------HQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 398 FGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G +GH    +V + PK +  L    V  +ACG  H+ A+       C      G+L++W
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS-----C------GELYSW 163

Query: 457 GDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           G    G+LG V   + L     P  +T ++       +CG   +  ++    V+  G   
Sbjct: 164 GSNIYGQLG-VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            GQLG    ++R+       ++   V+ ++ G  +   LT+ G V+T G    GQLG G 
Sbjct: 223 CGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGV 282

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           S     P  V  L    +  V CG+  T A+ 
Sbjct: 283 SNNEMIPRMVIELMGSTITQVACGNRHTLALV 314


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 27/340 (7%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G  H+A VT++G +F +G+   G+LG ++   V+ P  V+ L G   QSV+CG   
Sbjct: 38  HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T  GEI   G N+ G   +G       +  ++L    D   +  ++ G+  +A ++
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G LG GN  +   PKE+    G  +  V+CG  H+A + D       
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELN--MGQSIHWVSCGYRHSALVTD------- 206

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGE--RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G ++++G++  GRLG    +      P  V  L     +Q +CG   T+ LT   
Sbjct: 207 ----SGDVYSFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHTLALTE-D 259

Query: 504 KVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           ++Y  G    GQLG        D  + V  G  ++  V  ++ G  H A++T  G +YT+
Sbjct: 260 ELYCFGGGEFGQLGLGTLVFVADSPVAV--GHFRKGRVTHVTCGEQHSALITDSGLLYTF 317

Query: 561 GKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSS 598
           G   +G+LG GD     + TPT  +   +  V +V CGSS
Sbjct: 318 GDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 29/262 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
            Q+++ G  H  + T +GE+   G   DG+LG    N  +S  +L        ++ +S G
Sbjct: 88  AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + ALT+ G ++ WG N+ G    G   + SH L  K  +   G  +  V+CG  H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNSAGQLGFG---NDSHALLPKELNM--GQSIHWVSCGYRHSA 202

Query: 383 IVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           +V+ SG ++++G   DG  G+  H  L N S P+ VESL    V  VACG  HT A+ + 
Sbjct: 203 LVTDSGDVYSFGESADGRLGLSAH-QLANHSYPQRVESLHS--VLQVACGGKHTLALTE- 258

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL---PTCVTRLVDFDFVQASCGRMLT 496
                       +L+ +G  + G+LG   G    +   P  V           +CG   +
Sbjct: 259 -----------DELYCFGGGEFGQLGL--GTLVFVADSPVAVGHFRKGRVTHVTCGEQHS 305

Query: 497 VGLTGLGKVYTMGSAVHGQLGN 518
             +T  G +YT G   HG+LG+
Sbjct: 306 ALITDSGLLYTFGDGRHGKLGH 327



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGIS 542
           V  SCG+  +  +T  G+++  G    GQLG     P  K   + V++G    E  + ++
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKG----ERAQSVA 92

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            G+ H  V TS G +   G N++GQLGLG
Sbjct: 93  CGTDHTLVSTSQGEILAAGGNSDGQLGLG 121



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           LK +    IS G  H A +T  G ++ +G N  GQLGL        P  V+ L+  + +S
Sbjct: 31  LKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQS 90

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ-----CRMPFGFRRKKHNCYNCGLHFCSA 643
           V CG+  T        I     +S  Q     C     F+R +  C    +   SA
Sbjct: 91  VACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSA 146


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 152/299 (50%), Gaps = 21/299 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+  +G V   G+   G+LG K       P+ +  L  ++V  VSCG+  + A+
Sbjct: 31  GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  + ++P+K+  TL G+++ +VACG +H+  +S  GQ
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETT-FIPKKI-KTLAGIKIIQVACGHYHSVALSEDGQ 148

Query: 390 LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG  + G+L   G+    ++  P  +  L     V  SCG   T  LT  GKV
Sbjct: 198 LSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           +T G   +GQLG +P A+ R   +VE    E  V  I  GS H +A + + G V ++G+
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVSFGR 314



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 152/317 (47%), Gaps = 35/317 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P+ + +   L V  +S G +H+  V  +G VF WG   +G+LG  +       PK ++ L
Sbjct: 66  PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  V+CG + + AL++ G++++WG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 183

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G    G L   GN   V   +P  + +L+ L V S++C
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LGH     K  P  V R+      Q
Sbjct: 244 GYKHTAVLTQ-----------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQ 291

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKA----KDRSITVVEGKLKEE 536
             CG   T     L  +YT G  V    G        +P A     D S  V    L + 
Sbjct: 292 IDCGSDHT-----LAYIYTTGQVVSFGRGPGCASRSPHPGALAESSDISCLVSAKDLADV 346

Query: 537 FVKGISSGSYHVAVLTS 553
            VK I +G+Y   V TS
Sbjct: 347 QVKHIFAGTYANFVTTS 363



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 141/298 (47%), Gaps = 20/298 (6%)

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
           C  G  +   + GE  +  L   G + + G N+ G   +G + +     P ++   L+ +
Sbjct: 19  CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERI-PALETL 75

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVAC 428
            V+ V+CG+ H+  V   G++F +G  + G LG G  +  +  PK++++L G+K+  VAC
Sbjct: 76  HVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVAC 135

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFV 487
           G +H+ A+ +            G++F+WG    G+LG   +   +  P  V  L      
Sbjct: 136 GHYHSVALSE-----------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLA 184

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSG 544
           Q + G   +  L+  G  +  GS   GQL   GN     R   V  G LK   V  IS G
Sbjct: 185 QVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             H AVLT  G V+T+G N+ GQLG   + E+  P  VE + +  V  + CGS  T A
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLA 301



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G A +G +   + +    +PK +++   + +  ++ G  H+  ++++G+VF WG    G+
Sbjct: 100 GAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG NN G   L G  
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNN 219

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++  G++FT+GD ++G LGH        
Sbjct: 220 APVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRG 278

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG  HT A +
Sbjct: 279 PQLVERIEGL-VSQIDCGSDHTLAYI 303



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S N   V    P  + +   L V +IS G KH A++T++G+VF +G+   G+LGH   
Sbjct: 214 ALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
            +   P+LVE + G+ V  + CG   T A +  +G++ ++G
Sbjct: 274 AEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S G+V + G N+ GQLG   +   E P  + AL    V  V CG   + 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 34/346 (9%)

Query: 221 VMIWGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           V  WG  V G   +GG  D  V         LLP+ ++      VQ  + G  H  L+TK
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQV---------LLPREMDWCHSSSVQQAACGTSHTLLLTK 53

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSC-----PKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           +G++F  G    G+LGH    D  C     P+ +  L    V  VSCG   + ALT  G+
Sbjct: 54  DGKLFSCGNNDHGQLGH----DTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQ 109

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +++WG N+ G   +G       +   ++  T+    V ++A G++H+  ++ SG+LF++G
Sbjct: 110 VFSWGSNSIGQ--LGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWG 167

Query: 395 DGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
              +G LG G   + V  P  V+SL G+ +  +ACG  H+ A+        KS AI    
Sbjct: 168 ANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAV-------SKSGAI---- 216

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F WG    G+LG  D   +  P  +  L +      SCG   +  LT  G V+T G+   
Sbjct: 217 FGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTF 276

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVY 558
           GQLG+    +  +  +  +L    +  I+ G  H +A + S G +Y
Sbjct: 277 GQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 149/329 (45%), Gaps = 23/329 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           V+CWG    G LG     D  V  P+ ++     +VQ  +CG   T  LTK G++++ G+
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 341 NNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N+HG     +    +  LP K      +L+   V+ V+CG  H+  ++  GQ+F++G  +
Sbjct: 63  NDHG-----QLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 398 FGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LGH  +LQ  + P+ ++++    V  +A G +H+ A+ +            G+LF+W
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTN-----------SGELFSW 166

Query: 457 GDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G    G+LG    GE+ + PT V  L        +CG   +  ++  G ++  G    GQ
Sbjct: 167 GANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQ 226

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG      R        L+   V+ IS G    A LT  G V+T G    GQLG G    
Sbjct: 227 LGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSN 286

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAIC 604
              P  V  L   ++  + CG   T A  
Sbjct: 287 EILPRMVFELMGSKITQIACGRRHTLAFV 315



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 120/251 (47%), Gaps = 24/251 (9%)

Query: 188 NYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQ 247
           NY  T      +H L    +G            V  WG   +G  +G   D    Q  T 
Sbjct: 88  NYIVTHVSCGTTHSLALTNWGQ-----------VFSWGSNSIG-QLGHDTD---LQTYTT 132

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPK 306
                P+++++     V  I+ G  H+  +T  GE+F WG    G+LG     + V  P 
Sbjct: 133 -----PRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPT 187

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
           LV+ L+GI +  ++CG   + A++KSG I+ WG N  G   + +  SR    P++L  TL
Sbjct: 188 LVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRC--FPQQL-KTL 244

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             + V  ++CG+  +A ++  G +FT G GTFG LGHG   N   P+ V  L G K+  +
Sbjct: 245 RNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQI 304

Query: 427 ACGPWHTAAIV 437
           ACG  HT A V
Sbjct: 305 ACGRRHTLAFV 315



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 155/350 (44%), Gaps = 51/350 (14%)

Query: 390 LFTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           ++ +G+   G LG G +++  V  P+E++      V+  ACG  HT  +           
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTK--------- 53

Query: 448 AIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
              GKLF+ G+ D G+LGH  D      P  ++ L ++     SCG   ++ LT  G+V+
Sbjct: 54  --DGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVF 111

Query: 507 TMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           + GS   GQLG+          R I  +  K     V  I+SG +H   LT+ G +++WG
Sbjct: 112 SWGSNSIGQLGHDTDLQTYTTPRMIKTIATKT----VVQIASGQFHSLALTNSGELFSWG 167

Query: 562 KNANGQLGLGDSQERE-TPTFVEALRDRQVESVVCGSSITAAICLHKSI---------SV 611
            N  GQLGLG + E+  TPT V++L    +  + CG + + A+    +I          +
Sbjct: 168 ANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227

Query: 612 GDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGKPSRVCDTCYNH 671
           G     S+C     F ++     N G+ + S C      +A LT   G  +    T +  
Sbjct: 228 GLNDLVSRC-----FPQQLKTLRNLGVRYIS-CGDD--FSAFLTQEGGVFTCGAGT-FGQ 278

Query: 672 LQKITHSGRLLKQENQSPRNLLNLQGSLSEEV---KEEKGALTPSRGQSF 718
           L   T S  +L      PR +  L GS   ++   +    A  PSRG+ +
Sbjct: 279 LGHGTCSNEIL------PRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 169/363 (46%), Gaps = 28/363 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ IS G +H ALV K G VF +G+   G+LG      V+ P  ++ L       V+CG+
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTA 382
             T   T+  +I+ +G N+ G   VG+   R  W+P+ +   L+    +  ++ G  H+A
Sbjct: 98  SHTLISTECNKIFAFGCNSDGQLGVGDLDDR--WVPQMISTDLEKTNNIIALSAGCHHSA 155

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            ++  G ++ +GD + G  G  N   +  P+++E      + S++CG +HTA I      
Sbjct: 156 FLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQN--PINSISCGYYHTAFIS----- 208

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD--FVQASCGRMLTVGLT 500
                   GK++T+G+ D G+LG  D     LP  V   V+ D   +   CG   T+ LT
Sbjct: 209 -------LGKVYTFGEDDNGKLGRSDK----LPNDVPEGVELDENCISVKCGGSHTIILT 257

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI--SSGSYHVAVLTSGGSVY 558
             GK Y  GS   GQLG    +            +E V  I  + G  H A LT  G +Y
Sbjct: 258 ESGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLY 317

Query: 559 TWGKNANGQLGLGD-SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
           T G   NG+L   D S    TPT +E  +      V CG   T  + L K++ + +  + 
Sbjct: 318 TCGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHT--MVLAKALKLENHENA 375

Query: 618 SQC 620
           S+C
Sbjct: 376 SEC 378



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 33/278 (11%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +  +G ++T+G +    DL       SH+  R      D V+  +++CG+ HTA+V  SG
Sbjct: 9   IPDTGAVFTFGKSRFAEDL------SSHFFVRN-----DPVK--EISCGDEHTALVCKSG 55

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           ++F +G   FG LG G+ + V++P  ++SL+  +   VACG  HT     ++   C    
Sbjct: 56  RVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHT-----LISTECN--- 107

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD--FDFVQASCGRMLTVGLTGLGKVY 506
              K+F +G    G+LG  D + + +P  ++  ++   + +  S G   +  LT  G VY
Sbjct: 108 ---KIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVY 164

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G    GQ G    K+ +  +   K++ +  +  IS G YH A + S G VYT+G++ N
Sbjct: 165 IWGDNSDGQCG---IKNENYLLNPRKIEFQNPINSISCGYYHTAFI-SLGKVYTFGEDDN 220

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+LG  D    + P  VE   D    SV CG S T  +
Sbjct: 221 GKLGRSDKLPNDVPEGVEL--DENCISVKCGGSHTIIL 256



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 34/309 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV--EC 310
           P  L+S       +++ G  H  + T+  ++F +G   DG+LG     D   P+++  + 
Sbjct: 79  PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGV 369
               N+ ++S G   +  LT+ G +Y WG N+ G    G +       PRK+ F      
Sbjct: 139 EKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQ--CGIKNENYLLNPRKIEFQN---- 192

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            ++ ++CG +HTA +S  G+++T+G+   G LG  +      P+ VE        SV CG
Sbjct: 193 PINSISCGYYHTAFISL-GKVYTFGEDDNGKLGRSDKLPNDVPEGVE--LDENCISVKCG 249

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF----- 484
             HT  + +            GK + +G    G+LG  + E +     + + V+F     
Sbjct: 250 GSHTIILTE-----------SGKAYAFGSNFSGQLGLGNFETEF---SIPQRVNFTDENV 295

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR--SITVVEGKLKEEFVKGIS 542
           + +  +CG   +  LT  GK+YT G   +G+L N        + T +E   K  F   +S
Sbjct: 296 NLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDESTNICTPTTIE-MFKSFFCTYVS 354

Query: 543 SGSYHVAVL 551
            G  H  VL
Sbjct: 355 CGGCHTMVL 363


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 138/275 (50%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+L +  ++     I  G++H+  ++  G+V  WG+   G+LGH  + + V  PK+V 
Sbjct: 88  LIPELQDYVII----QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVR 143

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V      +H   P +L  TL G
Sbjct: 144 QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRL-TTLLG 202

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N S P ++++LR L V+ VAC
Sbjct: 203 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVAC 262

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 263 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 311

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+ L    G+VY  G    GQLG    K
Sbjct: 312 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 346



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 146/332 (43%), Gaps = 25/332 (7%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       VQ V+CG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 340 HNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++   G DL  +R   S   P  L   L    + ++ CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDYSQLGHDLPTKRPRMS---PFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 122

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+              G+L++
Sbjct: 123 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC-----------GELYS 171

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+    L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 172 WGSNIYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 230

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +RS       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 231 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 290

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 291 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 322



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 20/326 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD---VSCPKLVECLSGINVQSVS 320
           VQ ++ G +H   +T  G+V+  G     +LGH +      +S   L+  L    +  + 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQIC 101

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           CG   + AL+  G++ +WG N+ G   +G    +      K+   L    V ++ACG  H
Sbjct: 102 CGSRHSLALSDWGQVLSWGDNDCGQ--LGHATDKEIVQLPKVVRQLVTKTVVQIACGNNH 159

Query: 381 TAIVSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           +  +++ G+L+++G   +G LG     +L + + P  + +L G+ + ++ACG  H+  I 
Sbjct: 160 SLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI- 218

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                     +  G +F WG  + G+LG  D   +  PT +  L        +CG   +V
Sbjct: 219 ----------SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV 268

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGS 556
            LT  G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G 
Sbjct: 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 328

Query: 557 VYTWGKNANGQLGLGDSQERETPTFV 582
           VY +G  ++GQLG   ++    P  V
Sbjct: 329 VYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 17/194 (8%)

Query: 448 AIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+LG   ++ E+ L P+ +    D    Q +CG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 506 YTMGSAVHGQLGN--PKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           Y  GS  + QLG+  P  + R S  ++  +L++  +  I  GS H   L+  G V +WG 
Sbjct: 62  YACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 121

Query: 563 NANGQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSIS 610
           N  GQLG   D +  + P  V  L  + V  + CG++ + A+            ++  + 
Sbjct: 122 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 181

Query: 611 VGDQSSCSQCRMPF 624
           V   +  + C  P 
Sbjct: 182 VNSPNDLTHCNYPL 195


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 193/404 (47%), Gaps = 34/404 (8%)

Query: 220 DVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           D+  WG    G LG  +GG  D  +         L+P  +       ++ I+ G +H   
Sbjct: 2   DLFCWGNASHGQLG--MGGIEDEQI---------LIPSQIPWKPDAPLRQIACGHRHTLF 50

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           +T  G+V+  G     +LGH  N+    P L+  L    V +++CG   + ALT+ G++ 
Sbjct: 51  LTANGKVYACGNNDQAQLGH--NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVL 108

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           +WG N+ G   +G+   +S     K+  +L    V ++ACG  H+  +++ G+L+++G  
Sbjct: 109 SWGDNDCGQ--LGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSN 166

Query: 397 TFGVLGHGNLQNVSQ---PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
            +G LG    Q +S    P  + +L G+ + ++ACG  H+  I        KS+A+    
Sbjct: 167 IYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLI-------SKSSAV---- 215

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F +G  + G+LG  D   +  PT +  L        +CG   +V LT  G V+T G+  +
Sbjct: 216 FGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTY 275

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGD 572
           GQLG+    +  +  +  +L    +  ++ G+ H +A++ S G VY +G  ++GQLG   
Sbjct: 276 GQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRS 335

Query: 573 SQERETPTFVEALRDRQVESVVCGSS-ITAAICLHKSISVGDQS 615
           +     P  V        +S +  S+   A++ +H+  S GDQS
Sbjct: 336 TNSVTLPQEVLGPWVSPSDSALLQSNDAKASVVIHQIFSGGDQS 379


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 138/275 (50%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+L +  ++     I  G++H+  ++  G+V  WG+   G+LGH  + + V  PK+V 
Sbjct: 83  LIPELQDYVII----QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V      +H   P +L  TL G
Sbjct: 139 QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRL-TTLLG 197

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N S P ++++LR L V+ VAC
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVAC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 258 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+ L    G+VY  G    GQLG    K
Sbjct: 307 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           VQ ++ G +H   +T  G+V+  G     +LGH  ++    P L+  L    +  + CG 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGS 99

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++ +WG N+ G   +G    +      K+   L    V ++ACG  H+  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQ--LGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA 157

Query: 384 VSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +++ G+L+++G   +G LG     +L + + P  + +L G+ + ++ACG  H+  I    
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI---- 213

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  +  G +F WG  + G+LG  D   +  PT +  L        +CG   +V LT
Sbjct: 214 -------SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G VY 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 560 WGKNANGQLGLGDSQERETPTFV 582
           +G  ++GQLG   ++    P  V
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 143/332 (43%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       VQ V+CG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 340 HNNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++            H LP K   L   L    + ++ CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDYS--------QLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+              G+L++
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC-----------GELYS 166

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+    L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 167 WGSNIYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +RS       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 448 AIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+  LG ++ E+ L P+ +    D    Q +CG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  + QLG+     R + + E  L++  +  I  GS H   L+  G V +WG N  
Sbjct: 62  YACGSNDYSQLGHDLPTKRPLLIPE--LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119

Query: 566 GQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVGD 613
           GQLG   D +  + P  V  L  + V  + CG++ + A+            ++  + V  
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 614 QSSCSQCRMPF 624
            +  + C  P 
Sbjct: 180 PNDLTHCNYPL 190


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 21/316 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ LE+   L +   + G +H+ L+     V+  G+   G+LG K       P+ ++ LS
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            +++  VSCG+  + A+   G ++TWG  + G   +GE +  S ++P K+ ++L G+++ 
Sbjct: 79  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKI-NSLAGIKII 136

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V+CG +H+  +S  GQ+F++G    G LG G NL + + P++V+SL G+ +  VA G  
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 196

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQ 488
           H+ A+           ++ G  F WG+   G+L   G+   E+   P  +  L   + V 
Sbjct: 197 HSFAL-----------SLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVY 245

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
            SCG   T  LT  G+V+T G +   QL + P++      ++EG      V  I  GSYH
Sbjct: 246 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSYH 303

Query: 548 -VAVLTSGGSVYTWGK 562
            +A + + G V + G+
Sbjct: 304 TIAYVYTTGQVVSLGR 319



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 34/345 (9%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G  F W  G+              P+ +E  +G+ +   + GE  +  L  +  +Y+ G 
Sbjct: 7   GMYFTWAPGRRQ------------PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGD 54

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G++  +S   P  +   L  V +  V+CG+ H+  V   G++FT+G G+ G 
Sbjct: 55  NSRGQ--LGQKSPQSTKRPEPI-QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQ 111

Query: 401 LGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G  + +S  P ++ SL G+K+  V+CG +H+ A+ +            G++F+WG  
Sbjct: 112 LGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE-----------DGQVFSWGSN 160

Query: 460 DKGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL-- 516
            +G+LG  +    +  P  V  L      Q + G   +  L+ +G  +  G+   GQL  
Sbjct: 161 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 220

Query: 517 -GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            GN   +        G LK   V  IS G  H +VLT  G V+T+G +++ QL       
Sbjct: 221 SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSG 280

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLH--KSISVGDQSSCS 618
           R  P  +E +    V  + CGS  T A      + +S+G   SC+
Sbjct: 281 RGGPQLIEGI-GGHVSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 324



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   +++  + +P  + S   + +  +S G  H+  ++++G+VF WG  + G+
Sbjct: 105 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQ 164

Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG   N+   + P+ V+ L GI +  V+ G   + AL+  G  + WG+N  G   L G  
Sbjct: 165 LGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNS 224

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HT++++  GQ+FT+G  +   L H        
Sbjct: 225 AKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 283

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ +E + G  V  + CG +HT A V
Sbjct: 284 PQLIEGIGG-HVSQIECGSYHTIAYV 308


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 138/275 (50%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+L +  ++     I  G++H+  ++  G+V  WG+   G+LGH  + + V  PK+V 
Sbjct: 83  LIPELQDYVII----QICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V      +H   P +L  TL G
Sbjct: 139 QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRL-TTLLG 197

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N S P ++++LR L V+ VAC
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVAC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 258 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+ L    G+VY  G    GQLG    K
Sbjct: 307 VACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           VQ ++ G +H   +T  G+V+  G     +LGH  ++    P L+  L    +  + CG 
Sbjct: 42  VQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGS 99

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++ +WG N+ G   +G    +      K+   L    V ++ACG  H+  
Sbjct: 100 RHSLALSDWGQVLSWGDNDCGQ--LGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA 157

Query: 384 VSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +++ G+L+++G   +G LG     +L + + P  + +L G+ + ++ACG  H+  I    
Sbjct: 158 LTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI---- 213

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  +  G +F WG  + G+LG  D   +  PT +  L        +CG   +V LT
Sbjct: 214 -------SKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G VY 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 560 WGKNANGQLGLGDSQERETPTFV 582
           +G  ++GQLG   ++    P  V
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQVV 349



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 143/332 (43%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       VQ V+CG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 340 HNNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++            H LP K   L   L    + ++ CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDYS--------QLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+              G+L++
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC-----------GELYS 166

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+    L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 167 WGSNIYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +RS       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 448 AIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+LG   ++ E+ L P+ +    D    Q +CG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  + QLG+     R + + E  L++  +  I  GS H   L+  G V +WG N  
Sbjct: 62  YACGSNDYSQLGHDLPTKRPLLIPE--LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119

Query: 566 GQLGLG-DSQERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVGD 613
           GQLG   D +  + P  V  L  + V  + CG++ + A+            ++  + V  
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 614 QSSCSQCRMPF 624
            +  + C  P 
Sbjct: 180 PNDLTHCNYPL 190


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 152/313 (48%), Gaps = 26/313 (8%)

Query: 280 EGEVFCWGEGKDGRLGHKVNM-----DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           +G ++ +G+G  GRLGH V        V  PK +E L+ ++V  ++CG+  T ALT +G+
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +YTWG +  G   +G  +  +  +P +L   L    V +++ G  H A  +   + F +G
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVP-QLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWG 632

Query: 395 DGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
             TFG LG  ++ + +  P E+ SLR   ++S+ACG WHT    +            G +
Sbjct: 633 SNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT-----------GSV 681

Query: 454 FTWGDADKGRLGHVDGE-----RKLLP---TCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            + G    G+LGH D E      K LP     V    D   V+ S G+  +  +T  G++
Sbjct: 682 MSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRL 741

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +T G     QLG+  +K+ +         +  V  +S G  H+  L   G  Y+WG  + 
Sbjct: 742 FTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSA 801

Query: 566 GQLGLGDSQERET 578
           GQLG G+  ERET
Sbjct: 802 GQLGHGEMCERET 814



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 182/424 (42%), Gaps = 83/424 (19%)

Query: 244  NKTQVDALLPK-LLE-SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
            ++T  D L P  LLE   +  DV++I+ G   +A ++ +GEVF WG G+ G LGH   + 
Sbjct: 1464 HETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVL 1523

Query: 302  VSCPKLVECLSGINVQSVSCG-----------EFQTCALTKS------------------ 332
               P L++  S   V  ++CG             +T  LT S                  
Sbjct: 1524 TYAPSLIKDFS--EVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGS 1581

Query: 333  ----------------------------GEIYTWGHNNHG-ADLVGERRSRSHWLPRKLF 363
                                        G ++ WG +  G   + G + +RS  L + L 
Sbjct: 1582 VSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLL 1641

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             T     +  ++     +A V+ SG L+  G    G LG G++     P E+ SL  +K+
Sbjct: 1642 AT----SIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKI 1697

Query: 424  KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
              VACG +H  A+ +             +++ WGD   G  G  +    L P  ++ L  
Sbjct: 1698 MKVACGTYHCLALTEEK-----------RVYAWGDGKWGNAGVSNTNDVLEPQELSSLAA 1746

Query: 484  FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGI 541
               +    G   +  L+  G ++  G   +GQ  LG   A + S T +     +  V  +
Sbjct: 1747 CSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISN--LDGVVMDV 1804

Query: 542  SSGSYHVAVL--TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            S G+ H AVL   +  +++T G NANGQLGLGD  +R T T V+AL DRQ+ S  CG++ 
Sbjct: 1805 SLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAH 1864

Query: 600  TAAI 603
            TAA+
Sbjct: 1865 TAAV 1868



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 169/373 (45%), Gaps = 36/373 (9%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD------VSCPKLVECLSGINVQ 317
            +  ++ G +H+   + +G V+ WG G  G+LG   N D         P+ V  L    + 
Sbjct: 1215 IVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFIL 1274

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            S++CG +    LT   ++ +WG    G   +G   + S   P ++   LDG    K+ CG
Sbjct: 1275 SIACGRWHNMTLTSERQVLSWGAGEFGQ--LGLDHNLSKGTP-QMVKALDGRAPCKILCG 1331

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAI 436
             WH+A +  SG++  +G   +G LGHG+ ++ S P+  + LR   KV++   G  HT  +
Sbjct: 1332 GWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVV 1391

Query: 437  VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRM 494
            +           +  K+F  G    G+LG  D  R  K +P  +  L   +  Q + G  
Sbjct: 1392 M-----------VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQ 1440

Query: 495  LTVGLTGLGKVYTMGSAVHGQLGNPKAKDR--SITVVEGKLKEEFVKGISSGSYHVAVLT 552
             ++ L+  G+V++ G +  GQLG+    D+     ++E       VK I+ G    A ++
Sbjct: 1441 HSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMS 1500

Query: 553  SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-------- 604
            + G V+TWG   +G+LG         P+ ++     +V  + CG    A I         
Sbjct: 1501 AKGEVFTWGNGESGELGHAPKVLTYAPSLIKDF--SEVVQIACGFKHMAGIVFKPRMKTI 1558

Query: 605  -LHKSISVGDQSS 616
             L  S ++GD S+
Sbjct: 1559 ELTGSSNIGDNST 1571



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 151/334 (45%), Gaps = 28/334 (8%)

Query: 279  KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
            + G VF WGE   G+LG +       P L++ L   ++  +S     +  +T SG +Y  
Sbjct: 1608 RHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVS 1667

Query: 339  GHNNHGADLVGERRSRSHWLPRKL---FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            G + HG      R    H  P        +L+ V++ KVACG +H   ++   +++ +GD
Sbjct: 1668 GGSEHG------RLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGD 1721

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G +G  G  N  +V +P+E+ SL    +  V  G +H+AA+              G LF 
Sbjct: 1722 GKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQY-----------GDLFM 1770

Query: 456  WGDADKGRLGHVDGERKLLPTCVTRLVDFDFV--QASCGRMLTVGLTGLG--KVYTMGSA 511
            WG    G+LG   G         T++ + D V    S G   +  L  +    ++T G  
Sbjct: 1771 WGKNSNGQLGL--GTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLN 1828

Query: 512  VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL- 570
             +GQLG     DRS       L +  +   S G+ H A ++  G + TWG   NGQLGL 
Sbjct: 1829 ANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLK 1888

Query: 571  -GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G S++ E P  + A+ +  +  VVCG  +T  +
Sbjct: 1889 AGLSKDIENPVQLPAICNDPMVKVVCGQEVTIVV 1922



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 36/345 (10%)

Query: 277  VTKEGE--VFCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSG 333
            V  EGE  ++ WG G +GRLGH  +   S P+ +    S   +  V+CG   + A +  G
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG 1232

Query: 334  EIYTWGHNNHGA-------DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             +Y WG  + G        D V   +    + P+ + + L    +  +ACG WH   +++
Sbjct: 1233 GVYAWGAGDRGQLGSLENFDCV---KINYAFNPQPVLN-LKRYFILSIACGRWHNMTLTS 1288

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
              Q+ ++G G FG LG  +  +   P+ V++L G     + CG WH+AAI++        
Sbjct: 1289 ERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE-------- 1340

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQASCGRMLTVGLTGLGKV 505
                GK+  WG    G+LGH D +    P     L ++     A  G   T+ +    KV
Sbjct: 1341 ---SGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKV 1397

Query: 506  YTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            + MGS + GQLG  +P    +++ V   +L  + +  +++G  H   L+  G V++WG +
Sbjct: 1398 FAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGS 1457

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQ-----VESVVCGSSITAAI 603
              GQLG     ++  PT    L +R      V+S+ CG + +AA+
Sbjct: 1458 PFGQLGHETITDKLAPT---PLLERHKIPPDVKSIACGYTFSAAM 1499



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 39/332 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           +NI L   H         VF WG+G++G+LG++       P +V     + V+  + G+ 
Sbjct: 83  ENIELQGSH---------VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQ 133

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERR-SRSHWLP----RKLFDTLDGV-----RVSKV 374
            T  L+  G + + G N +G   +G+   SRS  +     +K  D L  +      +  +
Sbjct: 134 HTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGI 193

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           A G +H+  ++ +G++F++G G++G LG G+  N   P+ V SL+  KV  +ACG  HTA
Sbjct: 194 AAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTA 253

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           AI  +           G ++TWG   +G+LGH   + +  P     L      +  CG  
Sbjct: 254 AITTV-----------GDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDD 302

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTS 553
            T+ +   G++Y+MG+  HGQLG   A DR I T+V G   E+ +   + G   +A LT+
Sbjct: 303 HTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIA-LTN 361

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            G V+ +G      L          P FV  L
Sbjct: 362 TGKVFAFGNETEPHL-------NRIPRFVAGL 386



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 147/308 (47%), Gaps = 25/308 (8%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P  + S   + +  ++ G  H   +T+E  V+ WG+GK G  G     DV  P+ +  L+
Sbjct: 1686 PVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLA 1745

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              ++  V  G F + AL++ G+++ WG N++G   +G   S +   P K+   LDGV V 
Sbjct: 1746 ACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGT-TSAAEDSPTKI-SNLDGV-VM 1802

Query: 373  KVACGEWHTAIVS--TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
             V+ G  H+A++   TS  LFT G    G LG G+  + S    V++L   ++ S +CG 
Sbjct: 1803 DVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGA 1862

Query: 431  WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQ 488
             HTAA+              G L TWG+   G+LG   G  K +  P  +  + +   V+
Sbjct: 1863 AHTAAVSQY-----------GDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVK 1911

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSG 544
              CG+ +T+ ++  G++Y  G      LG   ++ R   V    VEG ++      I+ G
Sbjct: 1912 VVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREFDVSFREVEGLIQP---TQIAVG 1968

Query: 545  SYHVAVLT 552
            S HV  L 
Sbjct: 1969 SVHVLALV 1976



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 175/398 (43%), Gaps = 53/398 (13%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V +WG+G   G +G         N+++    +P ++ +   + V+  +LG +H   ++ +
Sbjct: 92  VFMWGDGE-NGKLG---------NQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSAD 141

Query: 281 GEVFCWGEGKDGRLGHKVNM-----DVSCP---KLVECLSGI-----NVQSVSCGEFQTC 327
           G V   G    G+LG   +M      VS P   K ++ L  I     N+  ++ G + + 
Sbjct: 142 GVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSL 201

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           AL  +G+I++WG  + G   +G   +     PR    +L   +V  +ACG  HTA ++T 
Sbjct: 202 ALNDTGKIFSWGSGSWGKLGIGSDANAES--PR-FVASLQNSKVVHIACGAHHTAAITTV 258

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G ++T+G G  G LGH +++    P+   SLR    + + CG  HT  I+          
Sbjct: 259 GDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILR--------- 309

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              G+L++ G    G+LG  D   +++PT VT   +   +        ++ LT  GKV+ 
Sbjct: 310 --SGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFA 367

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G+     L      +R    V G  K + +  ++  ++    ++  G ++ W       
Sbjct: 368 FGNETEPHL------NRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPF---- 417

Query: 568 LGLGDSQERETPTFVEALRD-RQVESVVCGSSITAAIC 604
                S E E+   +E+    + V  + CG +  A IC
Sbjct: 418 -----SSEEESSRMLESFHAIKGVVRMFCGHNHMAVIC 450



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 28/304 (9%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++ WG   +G   +G +      +P  +      V V   A G+ HT  +S  G + + 
Sbjct: 91  HVFMWGDGENGK--LGNQSEEIQHVPY-IVPAFRNVLVKVCALGKQHTLFLSADGVVLSC 147

Query: 394 GDGTFGVLGHGNLQ-----NVSQPKEVESLRGLK--------VKSVACGPWHTAAIVDIM 440
           G   +G LG G+        VS+P + +SL  L+        +  +A G +H+ A+ D  
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT- 206

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                     GK+F+WG    G+LG         P  V  L +   V  +CG   T  +T
Sbjct: 207 ----------GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAIT 256

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            +G V+T G  + GQLG+   K+     +   L++   + I  G  H  V+   G +Y+ 
Sbjct: 257 TVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSM 316

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVC-GSSITAAICLHKSISVGDQSSCSQ 619
           G N +GQLGLGD+ +R  PT V    + +V  +   G    A     K  + G+++    
Sbjct: 317 GANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376

Query: 620 CRMP 623
            R+P
Sbjct: 377 NRIP 380



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 138/314 (43%), Gaps = 28/314 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +  +G+GV G  +G  V+ + S+   +     PK +E+   + V  I+ G    A +T  
Sbjct: 517 IYTYGKGVFG-RLGHGVEYTRSEESVK----HPKRIETLAKMSVVFIACGKDSTAALTDT 571

Query: 281 GEVFCWGEGKDGRLGHKVN--MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           G+V+ WG+   G+LG      + +  P+LV+ LS   V  +S G       T   + + W
Sbjct: 572 GKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVW 631

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G N  G   +G     S+        +L    +  +ACG WHT I + +G + + G G  
Sbjct: 632 GSNTFGQ--LGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWH 689

Query: 399 GVLGHGNLQNVSQ--------PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           G LGHG+ ++++          K VE      +  V+ G   +AAI +            
Sbjct: 690 GQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITN-----------K 738

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+LFTWG  D+ +LGH   + +  P  V        V  S G    + L   G  Y+ G+
Sbjct: 739 GRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGN 798

Query: 511 AVHGQLGNPKAKDR 524
              GQLG+ +  +R
Sbjct: 799 GSAGQLGHGEMCER 812



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 142/329 (43%), Gaps = 18/329 (5%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P L++S +   + +IS  +  +A VT  G ++  G  + GRLG         P  +  L+
Sbjct: 1634 PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLN 1693

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             + +  V+CG +   ALT+   +Y WG    G    G   +     P++L  +L    + 
Sbjct: 1694 TVKIMKVACGTYHCLALTEEKRVYAWGDGKWGN--AGVSNTNDVLEPQEL-SSLAACSII 1750

Query: 373  KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGLKVKSVACGPW 431
             V  G +H+A +S  G LF +G  + G LG G        P ++ +L G+ V  V+ G  
Sbjct: 1751 GVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGAN 1809

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
            H+A ++ +             LFT G    G+LG  D   +   T V  L D   V ASC
Sbjct: 1810 HSAVLMQVTSP---------NLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASC 1860

Query: 492  GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI---TVVEGKLKEEFVKGISSGSYHV 548
            G   T  ++  G + T G+  +GQLG      + I     +     +  VK +  G    
Sbjct: 1861 GAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVK-VVCGQEVT 1919

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERE 577
             V++  G +Y  G  +   LG   S+ RE
Sbjct: 1920 IVVSEKGELYMAGYESTIGLGGNSSRRRE 1948



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 160/405 (39%), Gaps = 53/405 (13%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSC 321
            V+   LGA H  +V    +VF  G   DG+LG         + P  +E L+G N+  V+ 
Sbjct: 1378 VRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAA 1437

Query: 322  GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWH 380
            G+  + AL+  GE+++WG +  G   +G         P  L +       V  +ACG   
Sbjct: 1438 GDQHSLALSVFGEVWSWGGSPFGQ--LGHETITDKLAPTPLLERHKIPPDVKSIACGYTF 1495

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV--- 437
            +A +S  G++FT+G+G  G LGH        P  ++     +V  +ACG  H A IV   
Sbjct: 1496 SAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFS--EVVQIACGFKHMAGIVFKP 1553

Query: 438  -DIMVDRCKSNAIG------------------------------------------GKLF 454
                ++   S+ IG                                          G +F
Sbjct: 1554 RMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVF 1613

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
             WG+   G+LG    +    P+ +  L+    V  S    ++  +T  G +Y  G + HG
Sbjct: 1614 VWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHG 1673

Query: 515  QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
            +LG          V    L    +  ++ G+YH   LT    VY WG    G  G+ ++ 
Sbjct: 1674 RLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTN 1733

Query: 575  ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            +   P  + +L    +  V  G   +AA+  +  + +  ++S  Q
Sbjct: 1734 DVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQ 1778



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 18/232 (7%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVE 309
           ++P+L++      V  ISLG  HAA  T   + F WG    G+LG   ++  +  P  + 
Sbjct: 596 VVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEIT 655

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR---SHWLP--RKLFD 364
            L   N++S++CG + T   T +G + + G   HG    G+  S    S  LP  +K+ +
Sbjct: 656 SLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVE 715

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
                 + KV+ G+  +A ++  G+LFT+G G    LGH + +N + P+EVE    ++V 
Sbjct: 716 GFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVV 775

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG-ERKLLP 475
            V+ G  H  A+              G  ++WG+   G+LGH +  ER+ LP
Sbjct: 776 DVSIGDSHMLAL-----------DYSGLPYSWGNGSAGQLGHGEMCERETLP 816



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 18/177 (10%)

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           G  +F WGD + G+LG+   E + +P  V    +      + G+  T+ L+  G V + G
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCG 148

Query: 510 SAVHGQLG------------NPKAKDRSITVVEGKLKE-EFVKGISSGSYHVAVLTSGGS 556
           S V+GQLG            +  +K +S+  ++  ++    + GI++G YH   L   G 
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGK 208

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGD 613
           +++WG  + G+LG+G     E+P FV +L++ +V  + CG+  TAAI      +VGD
Sbjct: 209 IFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAIT-----TVGD 260



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 40/305 (13%)

Query: 323 EFQTCALTKS------GEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           EF T  +  S      G IYT+G        HG +      S  H  P+++ +TL  + V
Sbjct: 499 EFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKH--PKRI-ETLAKMSV 555

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS--QPKEVESLRGLKVKSVACG 429
             +ACG+  TA ++ +G+++T+G    G LG G+ + ++   P+ V+ L    V  ++ G
Sbjct: 556 VFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLG 615

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFV 487
             H A   D+            K F WG    G+LG  H+       P  +T L + +  
Sbjct: 616 RNHAACSTDMH-----------KFFVWGSNTFGQLGIPHISSYMPD-PYEITSLREANIR 663

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT---------VVEGKLKEEFV 538
             +CG   T+  T  G V + G   HGQLG+   +  +           +VEG   + F+
Sbjct: 664 SIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEG-FGDSFI 722

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             +S+G    A +T+ G ++TWGK    QLG   S+    P  VE     +V  V  G S
Sbjct: 723 VKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDS 782

Query: 599 ITAAI 603
              A+
Sbjct: 783 HMLAL 787



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)

Query: 377  GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAA 435
            GE+H         ++T+G G  G LGHG     S P+E+ S     K+  VACG  H+ A
Sbjct: 1177 GEYH---------IYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLA 1227

Query: 436  IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG------ERKLLPTCVTRLVDFDFVQA 489
                        +  G ++ WG  D+G+LG ++            P  V  L  +  +  
Sbjct: 1228 -----------RSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSI 1276

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGS 545
            +CGR   + LT   +V + G+   GQLG      K   + +  ++G+   +    I  G 
Sbjct: 1277 ACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCK----ILCGG 1332

Query: 546  YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR-DRQVESVVCGSSITAAIC 604
            +H A +   G +  WGKN  GQLG GD++    P   + LR + +V +   G++ T  + 
Sbjct: 1333 WHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVM 1392

Query: 605  LHKSI 609
            +   +
Sbjct: 1393 VANKV 1397



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 18/188 (9%)

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            ++TWG    GRLGH        P  +T    +   V+ +CG   ++  +  G VY  G+ 
Sbjct: 1181 IYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAG 1240

Query: 512  VHGQLGNPKAKD-RSITVVEG-----KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              GQLG+ +  D   I           LK  F+  I+ G +H   LTS   V +WG    
Sbjct: 1241 DRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEF 1300

Query: 566  GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVGDQ 614
            GQLGL  +  + TP  V+AL  R    ++CG   +AAI            ++  +  GD 
Sbjct: 1301 GQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDT 1360

Query: 615  SSCSQCRM 622
             SCS  R+
Sbjct: 1361 KSCSAPRV 1368



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +  +S G + +A +T +G +F WG+G + +LGH+ + + + P+ VE  + I V  VS G+
Sbjct: 722 IVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGD 781

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
               AL  SG  Y+WG+ + G    GE   R   LPR +     G+R
Sbjct: 782 SHMLALDYSGLPYSWGNGSAGQLGHGEMCERET-LPRPIMLCRRGLR 827


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 168/377 (44%), Gaps = 39/377 (10%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN----VQSVSCGEFQTCALTKSGEIYTW 338
           +F +G+   G L      D S P  V+ L  IN    V  V+CG  QT  L ++G+++T 
Sbjct: 32  LFSFGQNTYGELALGDTNDRSTPTRVD-LGRINDTKHVVDVACGNEQTTILFENGDVFTC 90

Query: 339 GHNNHGADLVG--ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           G+N+ G   +G  ER     + P     +   VR+     G  H A +  +G L+T G  
Sbjct: 91  GYNDSGQCAIGTTERVPSLRFSPG--LSSHHTVRLFS-GNGSEHLAALCANGFLYTVGFN 147

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             G LG G    V++   VE L G +V  VAC  +HTA ++D            G L   
Sbjct: 148 MRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMD-----------NGDLHAC 196

Query: 457 GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
           G  D G+LG  D    L+P  V        +  +CG+  TV     G V   G   HGQL
Sbjct: 197 GCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256

Query: 517 GNPKAKDRSI--TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           G  +  +  +  T +   L    V  +S G +H A++T  G+VYT+G+N  GQLGLG   
Sbjct: 257 GLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKL 316

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCY 634
               PT VE+L   ++  V CG       C H ++++ D         PFG  R  H   
Sbjct: 317 HMARPTPVESLSRMRITQVACG-------CYH-TLALSDDGKV----FPFG--RNNHG-- 360

Query: 635 NCGLHFCSACSTKKIIN 651
             GL     C + ++I+
Sbjct: 361 QLGLETSMDCLSPQLIS 377



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 133/274 (48%), Gaps = 21/274 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +++    H A+V   G++   G    G+LG   +     P+ V+      V +V+CG+
Sbjct: 174 VVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQ 233

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T A  + G +  +G N+HG  L  +R S    LP +L   LD   V +++CG  HTAI
Sbjct: 234 HYTVASLRDGGVVAFGKNDHG-QLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAI 292

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           V+  G ++T+G   +G LG G+  ++++P  VESL  +++  VACG +HT A+ D     
Sbjct: 293 VTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSD----- 347

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  GK+F +G  + G+LG       L P  ++ L +      + G   +V L G  
Sbjct: 348 ------DGKVFPFGRNNHGQLGLETSMDCLSPQLISTLRN---KPVAAGFYHSVCLVGTP 398

Query: 504 KV-----YTMGSAVHGQLGNPKAKDRSITVVEGK 532
           K      YT+   +   L NP   D +  V+EG+
Sbjct: 399 KSENPPPYTLSGDLRKMLNNPTRSDTTF-VIEGR 431



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 150/335 (44%), Gaps = 22/335 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +++ G +   ++ + G+VF  G    G+        V   +    LS  +   +  G 
Sbjct: 68  VVDVACGNEQTTILFENGDVFTCGYNDSGQCAIGTTERVPSLRFSPGLSSHHTVRLFSGN 127

Query: 324 F--QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
                 AL  +G +YT G N  G   +G   + +      L + L G RV  VAC  +HT
Sbjct: 128 GSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEA---TLVEELAGKRVVDVACSYFHT 184

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           AIV  +G L   G   +G LG G+      P+ V+      V +VACG  +T A +    
Sbjct: 185 AIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLR--- 241

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVD--GERKLLPTCVTRLVDFDFV-QASCGRMLTVG 498
                    G +  +G  D G+LG +D   E  LLPT +   +D   V Q SCG   T  
Sbjct: 242 --------DGGVVAFGKNDHGQLG-LDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAI 292

Query: 499 LTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           +T  G VYT G   +GQLG   K      T VE  L    +  ++ G YH   L+  G V
Sbjct: 293 VTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVE-SLSRMRITQVACGCYHTLALSDDGKV 351

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           + +G+N +GQLGL  S +  +P  +  LR++ V +
Sbjct: 352 FPFGRNNHGQLGLETSMDCLSPQLISTLRNKPVAA 386


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 177/365 (48%), Gaps = 41/365 (11%)

Query: 234 GGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF-------- 284
           GG+V G + + +  Q  A +P  L +A    VQ IS    HAA VT+ G+V+        
Sbjct: 134 GGSVLGQNPAVSNLQRPASIP--LPAAATRIVQ-ISANFNHAAFVTESGQVYTFGDNVSC 190

Query: 285 CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
           C G G+ G+        +S P LV  L     Q VS G+  T ALT++GE+++WG N+HG
Sbjct: 191 CCGVGESGQ-------PISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWGCNSHG 243

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
              +G+  ++  + PR++ +  +   V++V+ G  HT  V+ SGQLF++G G+   LGH 
Sbjct: 244 Q--LGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTKSGQLFSWGYGSNYCLGHD 301

Query: 405 NLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           +     +PK VE      L + S A G  H+AAI  +           G ++TWG    G
Sbjct: 302 DFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSL-----------GYVYTWGKGYCG 350

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
            LGH  G  +  P  V  L     VQ    R  T  L   G V++ G   +  LG  + K
Sbjct: 351 ALGHGAGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLG-VQGK 409

Query: 523 DRSITVVEGK-----LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
             S TVV  +     L    V  I++G YH  V+T  G+++ +G N + QLG   S   E
Sbjct: 410 SASDTVVSPQSLDLALHGHKVSTIAAGMYHTLVITRKGAIFGFGDNDSSQLG-PVSVTNE 468

Query: 578 TPTFV 582
           TP  V
Sbjct: 469 TPLAV 473



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 19/281 (6%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACG 377
           V+ G + T  + + GE+Y  G    G  ++G+  + S+   P  +       R+ +++  
Sbjct: 112 VAAGRYHTLLVDRKGELYACGT---GGSVLGQNPAVSNLQRPASIPLPAAATRIVQISAN 168

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
             H A V+ SGQ++T+GD      G G + Q +S+P  V +L     + V+ G  +T A+
Sbjct: 169 FNHAAFVTESGQVYTFGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVAL 228

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRML 495
                         G+LF+WG    G+LG  + + +  P  +    + + V Q S G   
Sbjct: 229 TR-----------NGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICH 277

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
           T+ +T  G++++ G   +  LG+     + R   V  G   + F+   ++G  H A + S
Sbjct: 278 TLAVTKSGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDS 337

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
            G VYTWGK   G LG G   ++ TP  V AL+  +   VV
Sbjct: 338 LGYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVV 378



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 153/359 (42%), Gaps = 22/359 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-LSGINVQSVSCGEFQ 325
           ++ G  H  LV ++GE++  G G      +    ++  P  +    +   +  +S     
Sbjct: 112 VAAGRYHTLLVDRKGELYACGTGGSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNH 171

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
              +T+SG++YT+G N      VGE  S        L  TL+     +V+ G+ +T  ++
Sbjct: 172 AAFVTESGQVYTFGDNVSCCCGVGE--SGQPISKPTLVTTLERNPCQQVSTGQGYTVALT 229

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR-GLKVKSVACGPWHTAAIVDIMVDRC 444
            +G+LF++G  + G LG GN Q   +P+++E       V  V+ G  HT A+        
Sbjct: 230 RNGELFSWGCNSHGQLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTK------ 283

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR--LVDFDFVQASCGRMLTVGLTGL 502
                 G+LF+WG      LGH D   +L P  V      D   + A+ G   +  +  L
Sbjct: 284 -----SGQLFSWGYGSNYCLGHDDFLTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSL 338

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G VYT G    G LG+    D+   +V   LK      + +      VL   G+V+++G 
Sbjct: 339 GYVYTWGKGYCGALGHGAGTDQRTPLVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGW 398

Query: 563 NANGQLGLGDSQERET---PTFVE-ALRDRQVESVVCGSSITAAICLHKSI-SVGDQSS 616
            A   LG+      +T   P  ++ AL   +V ++  G   T  I    +I   GD  S
Sbjct: 399 MAYHSLGVQGKSASDTVVSPQSLDLALHGHKVSTIAAGMYHTLVITRKGAIFGFGDNDS 457


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  V  G  H+ A+      
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 148/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGA 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGRN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q   G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------QGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    + V    +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV----AG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG    G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V  G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 40/366 (10%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           K   + + P   E    L V  I+   K   ++++ G V+              N D   
Sbjct: 631 KYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLA 680

Query: 305 PKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP--- 359
           P+LV+ L+  N+  ++         AL  +GE+Y+WG  + G      R      +P   
Sbjct: 681 PQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVPLEE 734

Query: 360 RKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            K+     G +  K    +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P  V
Sbjct: 735 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 794

Query: 416 ESLRGLKVKSVACGPW--HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
             L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +   
Sbjct: 795 AGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSDGCK 843

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGK 532
            P  + +L D D V+  CG   ++ LT  G+VY+ G   + +LG+   +  R   ++EG 
Sbjct: 844 TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG- 902

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+ + V  +++GS H   LT    V++WG N   Q        +  P+ +  L  + +  
Sbjct: 903 LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVG 962

Query: 593 VVCGSS 598
           + CG +
Sbjct: 963 IACGPA 968



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV  WG      +G K   +V  P   E L+ + V  ++C E +   L+++G +YT  +N
Sbjct: 621 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 675

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC---GEWHTAIVSTSGQLFTYGDGTF 398
                        S  L  +L   L    + K+A    G  + A+ +T G+++++G G  
Sbjct: 676 -------------SDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT-GEVYSWGCGDG 721

Query: 399 GVLGHGNLQNVSQPKEVESLRGLK----VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           G LGHG+   + +PK + +  G +    V  +ACG  ++AAI              G+L+
Sbjct: 722 GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT-----------AEGELY 770

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAV 512
           TWG  + GRLGH   E + +P  V  L     +  +CG     T+ +T  G+V++ G   
Sbjct: 771 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 830

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +G+LG   +       +  KL++  V  +  GS     LT  G VY+WGK  N +LG G 
Sbjct: 831 YGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 890

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCR 621
            +    P  +E L+ ++V  V  GS  T  + L +   V    S  QC+
Sbjct: 891 EEHVRYPKLLEGLQGKKVIDVAAGS--THCLALTEDSEVHSWGSNDQCQ 937



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 13/157 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G    G  DG  +          PKL+E    LDV  +  G++ +  +TK+
Sbjct: 823 VWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALTKD 872

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V+ WG+G + RLGH     V  PKL+E L G  V  V+ G     ALT+  E+++WG 
Sbjct: 873 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 932

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           N+        R ++    P  L   LD   +  +ACG
Sbjct: 933 NDQCQHFDTLRVTKPE--PSAL-PGLDTKHIVGIACG 966


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 166/341 (48%), Gaps = 34/341 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I+ G +H AL+TK G +F +G    G+LG      V+ P  V+ L    V  V+CG   T
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT 100

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G++++ G N+ G   +G+   R+ +     FD+L  V++  +A G   +A ++ 
Sbjct: 101 LICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKM--LAAGSNTSAALTE 158

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG+LF +GD T G +G     +   P+EV+   G  +  V+CG +H+A +          
Sbjct: 159 SGKLFMWGDNTEGQIGLAKESHAPSPQEVDV--GGPISWVSCGYYHSAFVT--------- 207

Query: 447 NAIGGKLFTWGDADKGRLGHVDGE--RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G L+T+G+ D G+LG    +  R  +P  V  + +    Q +CG   TV LT   +
Sbjct: 208 --ADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE-PVTQVACGGGHTVALT-EER 263

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLK---EEFVKG----ISSGSYHVAVLTSGGSV 557
           ++T G    GQLG+         + E +L    E F KG    ++ G  H AV+T GG +
Sbjct: 264 LFTFGLGQFGQLGH------GTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLL 317

Query: 558 YTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
           YT+G   +G+LGLG+     +  PT         V++  CG
Sbjct: 318 YTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCG 358



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 125/249 (50%), Gaps = 29/249 (11%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           K+ACG+ HTA+++ +G+LF +G   +G LG G+ + V++P  V++L+  KV  VACG  H
Sbjct: 40  KIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNH 99

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV----Q 488
           T          C +    GK+F+ G   +G+LG  D E +   T   R+  FD +     
Sbjct: 100 TLI--------CTAQ---GKVFSSGGNSEGQLGLGDCEER---TTFQRIHAFDSLGPVKM 145

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGS 545
            + G   +  LT  GK++  G    GQ+G  K   A       V G      +  +S G 
Sbjct: 146 LAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGP-----ISWVSCGY 200

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAI 603
           YH A +T+ G++YT+G+  +G+LGL   Q      P  V+++++  V  V CG   T A+
Sbjct: 201 YHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE-PVTQVACGGGHTVAL 259

Query: 604 CLHKSISVG 612
              +  + G
Sbjct: 260 TEERLFTFG 268



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           ++ +CG   T  +T  G+++  GS   GQLG    +  +       LK E V  ++ G  
Sbjct: 39  LKIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRN 98

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAI 603
           H  + T+ G V++ G N+ GQLGLGD +ER T   + A      V+ +  GS+ +AA+
Sbjct: 99  HTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAAL 156



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           LK +    I+ G  H A++T  G ++ +G N  GQLGLG  +    PT V+AL+  +V  
Sbjct: 33  LKNDVPLKIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLL 92

Query: 593 VVCGSSITAAIC 604
           V CG + T  IC
Sbjct: 93  VACGRNHT-LIC 103


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 167/358 (46%), Gaps = 32/358 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA---------------LRDRQVESVVCGSSITAAIC 604
             A GQLG G +   + P+ V+                 + R V+ +  G   T  +C
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +++ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G  L  ER       P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NSKG-QLGHEREGNK---PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG G   +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGHG++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +VACG  H+  +   G+++T G  + G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K        + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 173/363 (47%), Gaps = 29/363 (7%)

Query: 224 WGEGVLGG-DIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
           WG  + G   +GG  D ++          +P+ ++ A   +V+ I+ G  +   +T +G+
Sbjct: 4   WGSTIHGELGLGGIEDENI---------FMPRQVDFAKANEVEQIACGENYTVTITNDGQ 54

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+  G    G+LGH+        +L+  L     + ++CG   T A+ + G++++WG N 
Sbjct: 55  VYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNM 112

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G           ++   L    + ++ACG  H+  ++  G+L+++G    G LG
Sbjct: 113 KGQ--LGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLG 170

Query: 403 HGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            G+   V++  PK + +L  + +  +ACG +HT  I           +  G +F WG   
Sbjct: 171 IGS-HTVTEIKPKRIITLAAVPIAFIACGGYHTVVI-----------SKSGVVFAWGRNT 218

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG  D +++++P  +  L +     A+CG   +V LT  G V+T G+ ++GQLG+  
Sbjct: 219 FGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGN 278

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
             +  +     +L    V  IS G  H +A++ S G VY WG    GQLG   S+   TP
Sbjct: 279 GMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTP 338

Query: 580 TFV 582
             V
Sbjct: 339 LVV 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 24/277 (8%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           ++ WG   HG   +G     + ++PR++ D      V ++ACGE +T  ++  GQ+++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQV-DFAKANEVEQIACGENYTVTITNDGQVYSCG 59

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
           +  +G LGH   +   Q   +  L     K +ACG  HT A+ +            G+LF
Sbjct: 60  NNDYGQLGHEKARKRLQL--IPGLDAFVFKKIACGSCHTLAVNE-----------WGQLF 106

Query: 455 TWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +WG   KG+LG   VD   +  P  V  L     VQ +CG   ++ LT  G++Y+ GS  
Sbjct: 107 SWGCNMKGQLGLNSVDCTERT-PRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNR 165

Query: 513 HGQLGNPKAKDRSITVVEGK----LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            GQLG       ++T ++ K    L    +  I+ G YH  V++  G V+ WG+N  GQL
Sbjct: 166 EGQLG---IGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQL 222

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           GL D+Q+R  P  +  LR+ +V    CG   +  + L
Sbjct: 223 GLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTL 259



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 146/327 (44%), Gaps = 24/327 (7%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           +FCWG    G LG     D  +  P+ V+      V+ ++CGE  T  +T  G++Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G   +G  ++R      +L   LD     K+ACG  HT  V+  GQLF++G    G 
Sbjct: 61  NDYGQ--LGHEKARKR---LQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQ 115

Query: 401 LGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG  ++    + P+ V++L    +  +ACG  H+ A+ +            G+L++WG  
Sbjct: 116 LGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN-----------DGELYSWGSN 164

Query: 460 DKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
            +G+LG   H   E K  P  +  L        +CG   TV ++  G V+  G    GQL
Sbjct: 165 REGQLGIGSHTVTEIK--PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQL 222

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G    + R +      L+   V   + G      LT  G V+T G    GQLG G+    
Sbjct: 223 GLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNE 282

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V  L    V  + CG   T A+
Sbjct: 283 ILPRQVMELMGSTVTQISCGKRHTLAL 309


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  V  G S   A+     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             +S G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  V+ G  H           C + +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSH-----------CLALSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  V+ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 132/241 (54%), Gaps = 15/241 (6%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-K 297
           GSV +        LP++LE+   + V  ++ G++H   +TKEG+V+ WG+   G+LG  K
Sbjct: 94  GSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGK 153

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
               +S P+ V  LSG+ +  VS G   + AL+ SG ++ WG N+ G   +G+ + R   
Sbjct: 154 KGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRC-- 211

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  + D+L+  + + ++CG+ HTAI++  G +FT+G G FG LGH + +N  +P+ V  
Sbjct: 212 TPTSV-DSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAE 270

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L G KV  +ACG +HT  + +             K++++G  D+ +LG  +     +P  
Sbjct: 271 LWGAKVTRIACGRYHTLVLQE-----------NNKIYSFGCNDQNQLGRSNDSHPSVPLP 319

Query: 478 V 478
           V
Sbjct: 320 V 320



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 163/358 (45%), Gaps = 43/358 (12%)

Query: 260 VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
           V   + ++S G    A     G  F      DG  G ++       K V+C   I  ++V
Sbjct: 27  VSFHIADLSAGRGALAFAKTNGNAFVM-RTSDGENGARMR---GKQKFVKCKEKI--EAV 80

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
            CG+ +   L++ G +Y         D+     +++ +LPR L +    + VS+VACG  
Sbjct: 81  GCGDDEVILLSEKGSVYR-------VDV-----TQALYLPRML-EAFCRIPVSQVACGSR 127

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           HT  ++  GQ++T+G  + G LG G    ++S P+ V SL G+ +  V+ G  H+ A+  
Sbjct: 128 HTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFAL-- 185

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                    ++ G +F WG  D G+LG  D + +  PT V  L        SCG+  T  
Sbjct: 186 ---------SVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAI 236

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           LT  G V+T GS   GQLG+  +++     +  +L    V  I+ G YH  VL     +Y
Sbjct: 237 LTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIY 296

Query: 559 TWGKNANGQLGLGDSQERETPTFVE-------ALRDRQVESVVCGSSITAAICLHKSI 609
           ++G N   QLG  +      P  V        +L  R+++      + ++A CL++S 
Sbjct: 297 SFGCNDQNQLGRSNDSHPSVPLPVLLPQVYKCSLLYREIQ-----RTFSSASCLNRSF 349


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 13/265 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
           +  I+ G++H+  +++ G+VF WG+ + G+LGH  + D V  PK+V  L    V  ++CG
Sbjct: 88  ITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACG 147

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              + ALT  GE+Y+WG N +G   V                TL G+ VS +ACG  H+ 
Sbjct: 148 SNHSLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSF 207

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++S S  +F +G    G LG  +  N + P ++++LR L V+ VACG   +  +      
Sbjct: 208 LISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL------ 261

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-G 501
                 I G +FT G    G+LGH     ++LP  V  L+     Q +CG   T+ L   
Sbjct: 262 -----TIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSI 526
            G++Y  G    GQLG    K  ++
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNL 341



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 135/280 (48%), Gaps = 18/280 (6%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+Y WG+ +HG   +G         P ++    D   V+++ACG  HT  ++ SG+++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSA-VNQIACGHRHTLFLTASGKVYAC 60

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G   +  LGH       +P ++  L+   +  +ACG  H+ A+ +            G++
Sbjct: 61  GSNDYSQLGHE--LPTKRPLQIPELQDYVITQIACGSRHSMALSE-----------WGQV 107

Query: 454 FTWGDADKGRLGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           F+WGD + G+LGH  D +   LP  V  LV    VQ +CG   ++ LT  G++Y+ GS +
Sbjct: 108 FSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNL 167

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           +GQLG     D   +    +L       V  I+ G  H  +++   +V+ WG+N  GQLG
Sbjct: 168 YGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLG 227

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           L D   R  PT ++ LR   V  V CG   +  + +   +
Sbjct: 228 LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGV 267



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 171/357 (47%), Gaps = 20/357 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G +H   +T  G+V+  G     +LGH+  +    P  +  L    +  ++CG 
Sbjct: 38  VNQIACGHRHTLFLTASGKVYACGSNDYSQLGHE--LPTKRPLQIPELQDYVITQIACGS 95

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL++ G++++WG N  G   +G    +      K+   L    V ++ACG  H+  
Sbjct: 96  RHSMALSEWGQVFSWGDNECGQ--LGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLA 153

Query: 384 VSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           ++  G+L+++G   +G LG     +LQ  + P  + +L G+ V ++ACG  H+  I    
Sbjct: 154 LTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLI---- 209

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
               KS+A+    F WG  + G+LG  D   +  PT +  L        +CG   +V LT
Sbjct: 210 ---SKSSAV----FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT 262

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G +Y 
Sbjct: 263 IEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYG 322

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS-ITAAICLHKSISVGDQS 615
           +G  ++GQLG  +++    P  V         S +  S+    A  +H+  S GDQS
Sbjct: 323 FGLGSSGQLGTRNTKSLNLPQLVIGPWVSPSGSTLLQSNDAKIASVIHQIFSGGDQS 379



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 28/331 (8%)

Query: 282 EVFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG        +  P  +       V  ++CG   T  LT SG++Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 340 HNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++   G +L  +R       P ++ +  D V ++++ACG  H+  +S  GQ+F++GD 
Sbjct: 62  SNDYSQLGHELPTKR-------PLQIPELQDYV-ITQIACGSRHSMALSEWGQVFSWGDN 113

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH + Q++ + PK V +L    V  +ACG  H+ A+              G+L++
Sbjct: 114 ECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLAL-----------TCCGELYS 162

Query: 456 WGDADKGRLGHV---DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           WG    G+LG     D ++   P  +T L+       +CG   +  ++    V+  G   
Sbjct: 163 WGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNN 222

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            GQLG     +R+       L+   V+ ++ G      LT  G V+T G  A GQLG G 
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGF 282

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           S     P  V  L    +  V CG+  T A+
Sbjct: 283 SSNEMLPRMVMELMGSTISQVACGNRHTLAL 313



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 25/261 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+   G  +G A D  + +        LPK++ + V   V  I+ G+ H+  +T  
Sbjct: 107 VFSWGDNECG-QLGHASDQDIVK--------LPKIVRNLVSKTVVQIACGSNHSLALTCC 157

Query: 281 GEVFCWGEGKDGRLGHKVNMDV---SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           GE++ WG    G+LG     D+   + P  +  L GI V +++CG   +  ++KS  ++ 
Sbjct: 158 GELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFG 217

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG NN G   + +  +R++    K   TL GVR   VACG+  +  ++  G +FT G G 
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTL-GVRF--VACGDEFSVFLTIEGGVFTCGAGA 274

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           +G LGHG   N   P+ V  L G  +  VACG  HT A+V             G+++ +G
Sbjct: 275 YGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALV----------PSRGRIYGFG 324

Query: 458 DADKGRLGHVDGERKLLPTCV 478
               G+LG  + +   LP  V
Sbjct: 325 LGSSGQLGTRNTKSLNLPQLV 345



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 146/351 (41%), Gaps = 52/351 (14%)

Query: 389 QLFTYGDGTFGVLGHGNLQ--NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           +L+ +G+ + G LG G ++   +  P  +       V  +ACG  HT  +          
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFL---------- 51

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               GK++  G  D  +LGH    ++  P  +  L D+   Q +CG   ++ L+  G+V+
Sbjct: 52  -TASGKVYACGSNDYSQLGHELPTKR--PLQIPELQDYVITQIACGSRHSMALSEWGQVF 108

Query: 507 TMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           + G    GQLG+   +D   +  +   L  + V  I+ GS H   LT  G +Y+WG N  
Sbjct: 109 SWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLY 168

Query: 566 GQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRM 622
           GQLG+    D Q+  TP  +  L    V ++ CG + +  I    ++    +++C Q   
Sbjct: 169 GQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQ--- 225

Query: 623 PFGFRRKKHNCY--------NCGLHFCSACSTKKIINASLTPNKGKPSRVCDTC----YN 670
             G   + +  Y          G+ F  AC  +   +  LT   G       TC    Y 
Sbjct: 226 -LGLNDETNRAYPTQLKTLRTLGVRFV-ACGDE--FSVFLTIEGG-----VFTCGAGAYG 276

Query: 671 HLQKITHSGRLLKQENQSPRNLLNLQGSLSEEV---KEEKGALTPSRGQSF 718
            L     S  +L      PR ++ L GS   +V        AL PSRG+ +
Sbjct: 277 QLGHGFSSNEML------PRMVMELMGSTISQVACGNRHTLALVPSRGRIY 321


>gi|223997658|ref|XP_002288502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975610|gb|EED93938.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 597

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 134/300 (44%), Gaps = 17/300 (5%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V +WG        G  + G  S +K  V    P+L+E     ++   S+G+ HA  V+K 
Sbjct: 164 VFVWG------GTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVSKG 217

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G++F WG G  G LG     +V  PK +  L  I V  V  GE   C  T   E+Y WGH
Sbjct: 218 GDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACIKTSQHELYAWGH 277

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             +G   +G                    +V  +ACG  HT +  TS  +F++G G  G 
Sbjct: 278 CANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHT-LACTSSTVFSWGSGDGGR 336

Query: 401 LGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI--MVDRCKSNAIGGKLFTWG 457
           LGHG +  +  +P E+ +L+G  V  +  G WH+A ++ I  M D        G L+TWG
Sbjct: 337 LGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVIAIPLMKDS-------GWLYTWG 389

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              +G+LG     +   P  VT L D       CG      +   G +YT GS  HG LG
Sbjct: 390 SGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYTWGSNKHGALG 449



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 143/316 (45%), Gaps = 29/316 (9%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGH----KVNMDVSCPKLVECLSGINVQSVSCGE 323
           S GA  +   T + +VF WG    G LG     K N+    P+LVE L+G  +   S G 
Sbjct: 149 SNGANISFATTHQHQVFVWGGTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGS 208

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
              CA++K G+++ WG+ + G    G+  +       K  +TLD + V  V  GE H  I
Sbjct: 209 SHACAVSKGGDLFVWGNGSFGVLGTGDTNNVD---TPKCLNTLDKIAVVDVVTGEKHACI 265

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQN---VSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            ++  +L+ +G    G LG GN      +S P  +      KV+ +ACG  HT A     
Sbjct: 266 KTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLA----- 320

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
              C S+ +    F+WG  D GRLGH  D   +  PT +  L     +    G   +  +
Sbjct: 321 ---CTSSTV----FSWGSGDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACV 373

Query: 500 TGL------GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             +      G +YT GS   GQLG       S   +   L + FV  +  GS H A + S
Sbjct: 374 IAIPLMKDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIAS 433

Query: 554 GGSVYTWGKNANGQLG 569
            G++YTWG N +G LG
Sbjct: 434 DGNLYTWGSNKHGALG 449



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 156/359 (43%), Gaps = 35/359 (9%)

Query: 264 VQNISLGAKH--AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
            Q + L  KH   A + ++G V+C G+   G+LG     D  C  ++    G +V  VS 
Sbjct: 89  TQELELETKHRRIADLEEQGAVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVST 148

Query: 322 --GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH---WLPRKLFDTLDGVRVSKVAC 376
             G   + A T   +++ WG    G  L+G   S      +   +L + L+G  + K + 
Sbjct: 149 SNGANISFATTHQHQVFVWGGT--GVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSI 206

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G  H   VS  G LF +G+G+FGVLG G+  NV  PK + +L  + V  V  G  H    
Sbjct: 207 GSSHACAVSKGGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACIK 266

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASC 491
                          +L+ WG    GRLG  + +  +      P  +       F+  +C
Sbjct: 267 TSQH-----------ELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFI--AC 313

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVA- 549
           G   T+  T    V++ GS   G+LG+     DR        LK   V  + +G++H A 
Sbjct: 314 GAEHTLACTS-STVFSWGSGDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSAC 372

Query: 550 -----VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                ++   G +YTWG    GQLG G   +  TP  V  L D  V +V CGSS  AAI
Sbjct: 373 VIAIPLMKDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAI 431


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 21/316 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ LE+   L +   + G +H+ L+     V+  G+   G+LG K       P+ ++ LS
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 229

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            +++  VSCG+  + A+   G ++TWG  + G   +GE +  S ++P K+ ++L G+++ 
Sbjct: 230 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKI-NSLAGIKII 287

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V+CG +H+  +S  GQ+F++G    G LG G NL + + P++V+SL G+ +  VA G  
Sbjct: 288 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 347

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQ 488
           H+ A+           ++ G  F WG+   G+L   G+   E+   P  +  L   + V 
Sbjct: 348 HSFAL-----------SLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVY 396

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
            SCG   T  LT  G+V+T G +   QL + P++      ++EG      V  I  GSYH
Sbjct: 397 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSYH 454

Query: 548 -VAVLTSGGSVYTWGK 562
            +A + + G V + G+
Sbjct: 455 TIAYVYTTGQVVSLGR 470



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 34/345 (9%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G  F W  G+              P+ +E  +G+ +   + GE  +  L  +  +Y+ G 
Sbjct: 158 GMYFTWAPGRRQ------------PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGD 205

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G++  +S   P  +   L  V +  V+CG+ H+  V   G++FT+G G+ G 
Sbjct: 206 NSRGQ--LGQKSPQSTKRPEPI-QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQ 262

Query: 401 LGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G  + +S  P ++ SL G+K+  V+CG +H+ A+ +            G++F+WG  
Sbjct: 263 LGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE-----------DGQVFSWGSN 311

Query: 460 DKGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL-- 516
            +G+LG  +    +  P  V  L      Q + G   +  L+ +G  +  G+   GQL  
Sbjct: 312 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 371

Query: 517 -GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            GN   +        G LK   V  IS G  H +VLT  G V+T+G +++ QL       
Sbjct: 372 SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSG 431

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLH--KSISVGDQSSCS 618
           R  P  +E +    V  + CGS  T A      + +S+G   SC+
Sbjct: 432 RGGPQLIEGI-GGHVSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 475



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   +++  + +P  + S   + +  +S G  H+  ++++G+VF WG  + G+
Sbjct: 256 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQ 315

Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG   N+   + P+ V+ L GI +  V+ G   + AL+  G  + WG+N  G   L G  
Sbjct: 316 LGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNS 375

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HT++++  GQ+FT+G  +   L H        
Sbjct: 376 AKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 434

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ +E + G  V  + CG +HT A V
Sbjct: 435 PQLIEGIGG-HVSQIECGSYHTIAYV 459


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 165/321 (51%), Gaps = 25/321 (7%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D+  P+ L     L++   + G +H+ L+     V+  G+   G+LG K   +   P+ +
Sbjct: 8   DSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPI 67

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           + L  +++  VSCG+  + A+   G ++ WG  + G   +GE +   + +P ++  TL G
Sbjct: 68  QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFK-EINLMPMRI-KTLGG 125

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSV 426
           +++ +V+CG +H+  +S  GQ+F++G  + G LG G +Q+ SQ  P++V SL G+ +  V
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLG-MQSSSQASPQKVTSLEGIPLAQV 184

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLV 482
           A G  H+ A+           ++ G  + WG    G+L  + GE   +    P  +  L 
Sbjct: 185 AAGGSHSFAL-----------SLTGTSYGWGSNSVGQLA-LSGENSTVQISKPHSIDALK 232

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL-GNPKAKDRSITVVEGKLKEEFVKGI 541
           +   +  SCG   T  LT  G+V+T G    GQL  NP+ K R   +VEG +K + V  I
Sbjct: 233 NLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEG-IKGQ-VSKI 290

Query: 542 SSGSYH-VAVLTSGGSVYTWG 561
             GSYH +A + + G V + G
Sbjct: 291 ECGSYHTIAYVYTTGQVVSLG 311



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 148/304 (48%), Gaps = 22/304 (7%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+ +    G+ +   + GE  +  L  +  +Y+ G N+ G   +G++R ++   P  +  
Sbjct: 12  PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQ--LGQKREQNTEQPEPI-Q 68

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKV 423
            L  + +  V+CG+ H+  V   G++F +G G+ G LG G  + ++  P  +++L G+K+
Sbjct: 69  ALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGIKI 128

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLV 482
             V+CG +H+ A+ +            G++F+WG   +G+LG  +    +  P  VT L 
Sbjct: 129 IQVSCGHYHSLALSE-----------DGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLE 177

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE----GKLKEEFV 538
                Q + G   +  L+  G  Y  GS   GQL     ++ ++ + +      LK   V
Sbjct: 178 GIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLA-LSGENSTVQISKPHSIDALKNLGV 236

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             IS G  H AVLT  G V+T+G N++GQL      +R  P  VE ++  QV  + CGS 
Sbjct: 237 IYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKG-QVSKIECGSY 295

Query: 599 ITAA 602
            T A
Sbjct: 296 HTIA 299



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 8/208 (3%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +   L+P  +++   + +  +S G  H+  ++++G+VF WG+   G+
Sbjct: 98  GAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQ 157

Query: 294 LGHKVNMDVS---CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVG 349
           LG  + M  S    P+ V  L GI +  V+ G   + AL+ +G  Y WG N+ G   L G
Sbjct: 158 LG--LGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSG 215

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
           E  +     P  + D L  + V  ++CG  HTA+++  GQ+FT+GD + G L +      
Sbjct: 216 ENSTVQISKPHSI-DALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKR 274

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIV 437
             P+ VE ++G +V  + CG +HT A V
Sbjct: 275 RGPQLVEGIKG-QVSKIECGSYHTIAYV 301



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 13/197 (6%)

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
           QP+ +    GL++   A G  H+  +               ++++ GD   G+LG    +
Sbjct: 11  QPRRLNGRDGLELLQAASGERHSLLLFS-----------NHRVYSCGDNSLGQLGQKREQ 59

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
               P  +  L   D    SCG+  ++ +   G+V+  G+   GQLG  + K+ ++  + 
Sbjct: 60  NTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMR 119

Query: 531 GK-LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEALRDR 588
            K L    +  +S G YH   L+  G V++WGKN+ GQLGLG  S  + +P  V +L   
Sbjct: 120 IKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGI 179

Query: 589 QVESVVCGSSITAAICL 605
            +  V  G S + A+ L
Sbjct: 180 PLAQVAAGGSHSFALSL 196



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +++   L V  IS G +H A++TK+G+VF +G+   G+L +        P+LVE + 
Sbjct: 225 PHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIK 284

Query: 313 GINVQSVSCGEFQTCA-LTKSGEIYTWGH 340
           G  V  + CG + T A +  +G++ + GH
Sbjct: 285 G-QVSKIECGSYHTIAYVYTTGQVVSLGH 312



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L S   VY+ G N+ GQLG    Q  E P  ++AL    ++ V CG   + 
Sbjct: 27  ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSI 86

Query: 602 AICLHK 607
           A+C HK
Sbjct: 87  AVC-HK 91


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 21/316 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ LE+   L +   + G +H+ L+     V+  G+   G+LG K       P+ ++ LS
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 229

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            +++  VSCG+  + A+   G ++TWG  + G   +GE +  S ++P K+ ++L G+++ 
Sbjct: 230 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKI-NSLAGIKII 287

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V+CG +H+  +S  GQ+F++G    G LG G NL + + P++V+SL G+ +  VA G  
Sbjct: 288 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 347

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQ 488
           H+ A+           ++ G  F WG+   G+L   G+   E+   P  +  L   + V 
Sbjct: 348 HSFAL-----------SLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVY 396

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
            SCG   T  LT  G+V+T G +   QL + P++      ++EG      V  I  GSYH
Sbjct: 397 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSYH 454

Query: 548 -VAVLTSGGSVYTWGK 562
            +A + + G V + G+
Sbjct: 455 TIAYVYTTGQVVSLGR 470



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 34/345 (9%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G  F W  G+              P+ +E  +G+ +   + GE  +  L  +  +Y+ G 
Sbjct: 158 GMYFTWAPGRRQ------------PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGD 205

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G++  +S   P  +   L  V +  V+CG+ H+  V   G++FT+G G+ G 
Sbjct: 206 NSRGQ--LGQKSPQSTKRPEPI-QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQ 262

Query: 401 LGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG G  + +S  P ++ SL G+K+  V+CG +H+ A+ +            G++F+WG  
Sbjct: 263 LGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSE-----------DGQVFSWGSN 311

Query: 460 DKGRLGHVDGE-RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL-- 516
            +G+LG  +    +  P  V  L      Q + G   +  L+ +G  +  G+   GQL  
Sbjct: 312 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLAL 371

Query: 517 -GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
            GN   +        G LK   V  IS G  H +VLT  G V+T+G +++ QL       
Sbjct: 372 SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSG 431

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLH--KSISVGDQSSCS 618
           R  P  +E +    V  + CGS  T A      + +S+G   SC+
Sbjct: 432 RGGPQLIEGI-GGHVSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 475



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   +++  + +P  + S   + +  +S G  H+  ++++G+VF WG  + G+
Sbjct: 256 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQ 315

Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG   N+   + P+ V+ L GI +  V+ G   + AL+  G  + WG+N  G   L G  
Sbjct: 316 LGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNS 375

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HT++++  GQ+FT+G  +   L H        
Sbjct: 376 AKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 434

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ +E + G  V  + CG +HT A V
Sbjct: 435 PQLIEGIGG-HVSQIECGSYHTIAYV 459


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 134/257 (52%), Gaps = 15/257 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCG 322
           + +++ G  H+  ++ +G +F WG G DG+LG     D V+ P+L++ L+   +  VSCG
Sbjct: 145 IIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCG 204

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            +   AL   G+ + WG N+HG   +G +   S   P+++  +LDG+ +++VA G  H+ 
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLG-KEFPSQASPQRV-KSLDGIPLAQVAAGGAHSF 262

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S SG +F +G  T G LG  + Q+   P  V+ LR  KV  ++CG  HTA +      
Sbjct: 263 ALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKT--- 319

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-G 501
                   G +FT+G    G+LGH     ++ P  V  L+  +  Q +CGR  T+     
Sbjct: 320 --------GGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPS 371

Query: 502 LGKVYTMGSAVHGQLGN 518
            G +Y  G  + GQLG+
Sbjct: 372 SGLIYAFGCGIKGQLGS 388



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 155/323 (47%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + S P+ +  L+  ++  V+CGE
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHE--KEGSKPEQIGALADQHIIHVACGE 152

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G +++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 153 SHSLALSDQGRLFSWGAGSDGQ--LGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLA 210

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ F +G  + G LG G    + + P+ V+SL G+ +  VA G  H+ A+      
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL------ 264

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG    G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 265 -----SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKT 319

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 320 GGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFG 379

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
               GQLG G +   + P+ V+ 
Sbjct: 380 CGIKGQLGSGHTCNLKCPSPVKG 402



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 127/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH   +  S+P+++ +L    +  VACG 
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHE--KEGSKPEQIGALADQHIIHVACGE 152

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG    E  + +P  + +L     +Q 
Sbjct: 153 SHSLALSD-----------QGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQV 201

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +  G   HGQLG  K     A  + +  ++G    +    +++G
Sbjct: 202 SCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQ----VAAG 257

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WGKN +GQLGL D Q+RE+P  V+ LR ++V  + CGS  TA + 
Sbjct: 258 GAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLT 317

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 318 KTGGVFTFGAGSCGQ 332



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 146/329 (44%), Gaps = 20/329 (6%)

Query: 279 KEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           K  ++ CWG    G  G    V   +  P+    +   +V+ V+CG   +  L + GE+Y
Sbjct: 56  KGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVY 115

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           T G N  G   +G  +  S   P ++   L    +  VACGE H+  +S  G+LF++G G
Sbjct: 116 TCGVNTKGQ--LGHEKEGSK--PEQI-GALADQHIIHVACGESHSLALSDQGRLFSWGAG 170

Query: 397 TFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           + G LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ F 
Sbjct: 171 SDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWH-----------CLALAADGQFFA 219

Query: 456 WGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
           WG    G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    G
Sbjct: 220 WGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSG 279

Query: 515 QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           QLG    +DR        L+ + V  IS GS H AVLT  G V+T+G  + GQLG     
Sbjct: 280 QLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFN 339

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAI 603
           +   P  V  L   +V  + CG   T A 
Sbjct: 340 DEVNPRRVLELMGSEVSQIACGRQHTLAF 368



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 168 GAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQ 227

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG ++ WG N  G   + + +
Sbjct: 228 LGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ 287

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CG  HTA+++ +G +FT+G G+ G LGH +  +   P
Sbjct: 288 DRESPCHVKLLRT---QKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNP 344

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   KG+LG
Sbjct: 345 RRVLELMGSEVSQIACGRQHTLAFV----------PSSGLIYAFGCGIKGQLG 387


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  132 bits (333), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + + GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKN 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG    E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
            +  +      SC Q
Sbjct: 259 KNGGVFTFGAGSCGQ 273



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ +G +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  +A   D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 399 TQEKILQPKL--AATFADAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTL 456

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +       ++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 457 KKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 514

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A VS  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 515 QGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 572

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  V  L 
Sbjct: 573 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQ 622

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     V
Sbjct: 623 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELATTRV 677

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 678 VDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGT 737

Query: 598 SITAA 602
           S + A
Sbjct: 738 SHSLA 742



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 169/357 (47%), Gaps = 22/357 (6%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    +  + Q++  G++ T 
Sbjct: 369 SIQTGEAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFA--DAQTIEAGQYCTF 426

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    + +VS     + HT   +T
Sbjct: 427 VISSDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRAIKKVSSSKGSDGHTLAFTT 485

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 486 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE------- 538

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 539 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 592

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V++ G   +G+LG+          V   L+  F++ + +GS     LTS G VY WG  A
Sbjct: 593 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 565 NGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              LG G S+     P  +E L   +V  +  G S   A+     +     +S  QC
Sbjct: 653 C--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQC 707



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 541 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 587

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK+VE L G+ ++ V  G   + ALT +G++Y 
Sbjct: 588 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 647

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   RV  ++ G+ H   +S   +++ +G+ +
Sbjct: 648 WG---CGACL-GCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNS 703

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 704 MGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLAWTALPRDR 750



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 25/295 (8%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
           ++  S+  GE     ++++ E+Y WG N+    + G   ++   L  KL  T    +   
Sbjct: 365 VSPDSIQTGE--APVVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAATFADAQT-- 417

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRGLK-VKSVACGP 430
           +  G++ T ++S+ G +   G G++G LG G+  N S  K++  E  R +K V S     
Sbjct: 418 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSD 477

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ-A 489
            HT A               G++F+WGD D G+LGH +   +  P  +   +    V   
Sbjct: 478 GHTLAFT-----------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCV 526

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           S G   +  ++  G++YT G    G+LG+  +  R+I  +   +    V  +S GS H  
Sbjct: 527 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTI 584

Query: 550 VLTSGG-SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            L+  G +V+++G   NG+LG GD+     P  VEAL+   +  V  GS  + A+
Sbjct: 585 ALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLAL 639


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  V  G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKN 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VTAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
            +  +      SC Q
Sbjct: 259 KNGGVFTFGAGSCGQ 273



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ +G +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 150/300 (50%), Gaps = 22/300 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+   GE+  +G+   G+LG +       PK +  L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE  +  + +PRK+  TL  +++ +V+CG  H+  +S  G+
Sbjct: 91  CYKGRVFAWGAGSEGQLGIGE-FNEINLIPRKI-KTLTDIKIIQVSCGHHHSLALSEDGR 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           LFT+G  + G LG G    + + P+ V+ L G+ +  VA G  H+ A+           +
Sbjct: 149 LFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG   +G+L     +V   +   P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGK 257

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G   +GQLG +P A      +VEG   +  V  I  GSYH +A + + G V ++G+
Sbjct: 258 VFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVSFGR 315



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 153/316 (48%), Gaps = 29/316 (9%)

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           G  ++  + GE  +  L  +GE++++G N+HG   +G R  +    P+++   L+ +RV 
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQPKRI-PALETLRVD 78

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPW 431
            V+CG+ H+  V   G++F +G G+ G LG G    ++  P+++++L  +K+  V+CG  
Sbjct: 79  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHH 138

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQAS 490
           H+ A+ +            G+LFTWG    G+LG   +   +  P  V  L      Q +
Sbjct: 139 HSLALSE-----------DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVA 187

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK-------LKEEFVKGISS 543
            G   +  L+  G  +  GS   GQL     + +++ VV+         L+   V  IS 
Sbjct: 188 AGGAHSFALSLSGASFGWGSNSEGQLA---LRKKNVPVVQSSKPCSVDALENLGVVYISC 244

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  H AVLT  G V+T+G N+ GQLG   +  +E P  VE + D  V  + CGS  T A 
Sbjct: 245 GYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGI-DGLVSQIDCGSYHTLAY 303

Query: 604 CLH--KSISVGDQSSC 617
                K +S G    C
Sbjct: 304 VYTTGKVVSFGRGPCC 319



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 30/268 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----HKVNMDVSCPKLV 308
           PK + +   L V  +S G +H+  V  +G VF WG G +G+LG    +++N+    P+ +
Sbjct: 66  PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINL---IPRKI 122

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           + L+ I +  VSCG   + AL++ G ++TWG N+HG   +G +   S   P+++   LDG
Sbjct: 123 KTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLG-KECPSQASPQRV-QFLDG 180

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG--HGNLQNV--SQPKEVESLRGLKVK 424
           + +++VA G  H+  +S SG  F +G  + G L     N+  V  S+P  V++L  L V 
Sbjct: 181 IPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVV 240

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            ++CG  HTA +              GK+FT+G    G+LG+     K  P  V   +D 
Sbjct: 241 YISCGYEHTAVLTQT-----------GKVFTFGGNSYGQLGYSPTAGKEGPQLVEG-IDG 288

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAV 512
              Q  CG   T     L  VYT G  V
Sbjct: 289 LVSQIDCGSYHT-----LAYVYTTGKVV 311



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 3/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   +     L+P+ +++   + +  +S G  H+  ++++G +F WG    G+
Sbjct: 100 GAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V+ L GI +  V+ G   + AL+ SG  + WG N+ G   + ++ 
Sbjct: 160 LGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKN 219

Query: 353 SRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                  +    D L+ + V  ++CG  HTA+++ +G++FT+G  ++G LG+        
Sbjct: 220 VPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEG 279

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG +HT A V
Sbjct: 280 PQLVEGIDGL-VSQIDCGSYHTLAYV 304



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L V  IS G +H A++T+ G+VF +G    G+LG+        P+LVE + G+ V  + C
Sbjct: 237 LGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGL-VSQIDC 295

Query: 322 GEFQTCA-LTKSGEIYTWG 339
           G + T A +  +G++ ++G
Sbjct: 296 GSYHTLAYVYTTGKVVSFG 314


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 51/362 (14%)

Query: 267 ISLGAKHAALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           IS GA H+  +   GEV C WG G+DG+LGH    D S P  +  L    + SV+CG   
Sbjct: 16  ISAGASHSVALLS-GEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADH 74

Query: 326 TCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           T A ++S  E+Y+WG  + G   +G   S   + P  +   L GV + ++ACG+ H   V
Sbjct: 75  TVAYSQSRLEVYSWGWGDFGR--LGHGNSSDLFTPLPI-KALHGVMIKQIACGDSHCLAV 131

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           +  G++ ++G    G LG GN ++   P+++++  G+++K VA G  HTAA+     +  
Sbjct: 132 TMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV----TEDG 187

Query: 445 KSNAIGGKLFTWGDADKGR----------LGHVDGE------------------RKLLPT 476
                 GK++ +G +D+            +  VDG                    ++ PT
Sbjct: 188 DLYGWDGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPT 247

Query: 477 CVTRL-------------VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
              RL                 F Q S G   T+ LT  GK+Y  G    GQ+G     D
Sbjct: 248 RTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLD 307

Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
           +   V      ++ V  +S G  H   +T   +V+ WG+  NGQLG+G+S +R +P  +E
Sbjct: 308 QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIE 367

Query: 584 AL 585
           AL
Sbjct: 368 AL 369



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 1/150 (0%)

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVYTMGSAVH 513
           +WG  + G+LGH D E +  PT ++ L +   V  +CG   TV  +    +VY+ G    
Sbjct: 34  SWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDF 93

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           G+LG+  + D    +    L    +K I+ G  H   +T  G V +WG+N NGQLGLG++
Sbjct: 94  GRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNT 153

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
           ++   P  ++A    +++ V  G+  TAA+
Sbjct: 154 EDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 183



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 11/207 (5%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  ++ G  H+  + +   + ++G G  G LGHG+ ++ S P ++ +L   ++ SV CG
Sbjct: 12  KVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCG 71

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A     ++          +++WG  D GRLGH +      P  +  L      Q 
Sbjct: 72  ADHTVAYSQSRLE----------VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQI 121

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG    + +T  G+V + G   +GQLG    +D  +       +   +K +++G+ H A
Sbjct: 122 ACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 181

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQER 576
            +T  G +Y W      + G+ D  +R
Sbjct: 182 AVTEDGDLYGW-DGKIWKFGISDRNDR 207



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-V 548
           S G   +V L     V + G    GQLG+  A+DRS       L E  +  ++ G+ H V
Sbjct: 17  SAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTV 76

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   S   VY+WG    G+LG G+S +  TP  ++AL    ++ + CG S   A+ +   
Sbjct: 77  AYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGE 136

Query: 609 I 609
           +
Sbjct: 137 V 137



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  +S G +H   VT+   VF WG G +G+LG   ++D + P ++E LS
Sbjct: 322 VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIEALS 370


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 33/363 (9%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           +G+ ++NK     ++P ++ +   +  + I   + H+  +T +GE   WG G   RLGH 
Sbjct: 191 EGNCTENK-----MVPTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGDKYRLGHG 245

Query: 298 VNMDVSCPKLVECLS-GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
            +     P+ +E LS    V+ ++CG   T AL +SGE+Y WG+ ++G   +G+   RS 
Sbjct: 246 SSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSS 305

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
              R    ++  VR   + CG  H+  +S  G+ + +G    G  GHG+  +    +E+E
Sbjct: 306 -PTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIE 364

Query: 417 SLRGLKVKS------VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR------- 463
           S R  +          A G W            C ++   G++++ G   K         
Sbjct: 365 SFRDTEEGEEEEFVVYAAGGWEHTLF-------CTAS---GRVYSCGCGYKDSRRAGIPP 414

Query: 464 -LGHVDGERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            LGH D +R+L PT V  L D   + V+ +CG   ++ +T  G+VYT GS  +G+LG+  
Sbjct: 415 VLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGD 474

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            +   I  +   +  + VK   +G  H   LT    ++T G+  +G+LG GDSQ R+ PT
Sbjct: 475 EESFDIPTLVRCMDGKKVKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPT 534

Query: 581 FVE 583
            +E
Sbjct: 535 KIE 537



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 170/395 (43%), Gaps = 56/395 (14%)

Query: 244 NKTQVDALLPKLLE-SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           N  + ++L P   E +A  ++   I+ G +        G +  +G+G  G+LGH     V
Sbjct: 132 NGARFESLGPLFRELAATSIERPQIAFGEEEQPC----GYLMSFGKGDHGKLGHGQCSHV 187

Query: 303 SC-----------PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           SC           P ++     +  + +      + A+T  GE   WG+ +     +G  
Sbjct: 188 SCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGD--KYRLGHG 245

Query: 352 RSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
            S   + PR + F +L G RV  +ACG  HT  +  SG+L+ +G+G+ G LG G+  + S
Sbjct: 246 SSSKEYTPRTIEFLSLKG-RVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRS 304

Query: 411 QPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
            P      S+  ++ + + CG  H+  +           +  G+ + WG  ++G+ GH  
Sbjct: 305 SPTRSNGASIAPVRFRHIFCGASHSLGL-----------SWDGRAYAWGKNNQGQCGHGH 353

Query: 469 GERKLLPTCVTRLVDFD-------FVQASCGRMLTVGLTGLGKVYTMGSAV--------- 512
              +     +    D +        V A+ G   T+  T  G+VY+ G            
Sbjct: 354 TNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIP 413

Query: 513 ----HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
               HG   + + K  S+  ++    EE VK ++ G  H   +T+ G VYTWG  ANG+L
Sbjct: 414 PVLGHGDC-DRRLKPTSVQALD-DTHEEVVK-VACGWDHSLAVTANGRVYTWGSGANGKL 470

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G GD +  + PT V  +  ++V+    G   T  +
Sbjct: 471 GHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFL 505



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V  ++ G  H+  VT  G V+ WG G +G+LGH        P LV C+ G  V+    G
Sbjct: 439 EVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAG 498

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
              T  LT   E++T G  + G    G+ ++R      +LF
Sbjct: 499 CEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIELF 539


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 152/337 (45%), Gaps = 23/337 (6%)

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E EV+  G+   G LGH         + ++ L    +  +  G   T  LT  G+++T G
Sbjct: 561 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +N++G    G     SH       D+  G   +    G  HT +VST G++ T G    G
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDS--GSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 678

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHGN  + S PK + SL    V+ V+C  +HT       V  C+   +   L+T+G  
Sbjct: 679 QLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT-------VLACEDGNLQN-LYTFGRN 730

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           D G+LGH D   + +P  V  L D   V  +CG+  T+ +T  GK +  G   +GQLG  
Sbjct: 731 DYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGID 790

Query: 520 KAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             +++   V V G L+ +    I  G YH   L SG  ++ +G+N  GQLGLG S    T
Sbjct: 791 TMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASST 850

Query: 579 PT------------FVEALRDRQVESVVCGSSITAAI 603
                          ++ L  + +  + CG   T A+
Sbjct: 851 SNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 887



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 164/361 (45%), Gaps = 37/361 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS----CPKLVECLSGINVQS 318
           ++  I  G +H  ++T +G+VF  G   +G+ G      VS     PK+    SG +   
Sbjct: 596 EIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMD---SGSSQAH 652

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
              G   T  ++  G + T G+N  G   +G   + S  +P K+  +L+   V  V+C  
Sbjct: 653 AYNGCEHTILVSTDGRVATCGYNYRGQ--LGHGNTTSESVP-KIIRSLENKIVRLVSCSY 709

Query: 379 WHTAIVSTSGQL---FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           +HT +    G L   +T+G   +G LGH +  +   P+ VE+L   ++ SVACG +HT  
Sbjct: 710 YHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMV 769

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRM 494
           +              GK F +G  D G+LG    E +L P  V   L   + ++  CG  
Sbjct: 770 V-----------TASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYY 818

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE--------GKLKEEF----VKGIS 542
            T+ L     ++  G   +GQLG  ++   S + ++         +L +E     +  I+
Sbjct: 819 HTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIA 878

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G YH   ++  G +Y +G+N +GQLG GD+ ER  P  ++    ++V  V  G   T  
Sbjct: 879 CGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVV 938

Query: 603 I 603
           +
Sbjct: 939 L 939



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 30/301 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H  LV+ +G V   G    G+LGH      S PK++  L    V+ VSC  + T   
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 330 TKSGEI---YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            + G +   YT+G N++G   +G   S    +P +  + L   ++  VACG++HT +V+ 
Sbjct: 716 CEDGNLQNLYTFGRNDYGQ--LGHNDSIDRKIP-QFVEALSDQQIVSVACGQYHTMVVTA 772

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           SG+ F +G   +G LG   ++N   P +V   L   +   + CG +HT A+       C 
Sbjct: 773 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL-------CS 825

Query: 446 SNAIGGKLFTWGDADKGRLG------------HVDGERKLLPTCVTRLVDFDFVQASCGR 493
               G  LF +G  D G+LG             +  +R      +  L   D V+ +CG 
Sbjct: 826 ----GAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGC 881

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             T+ ++  G +Y  G   HGQLG     +R           + V  +++G YH  VLT 
Sbjct: 882 YHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLTG 941

Query: 554 G 554
           G
Sbjct: 942 G 942



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEV---FCWGEGKDGRLGHKVNMDVSCPKLV 308
           +PK++ S     V+ +S    H  L  ++G +   + +G    G+LGH  ++D   P+ V
Sbjct: 690 VPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFV 749

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           E LS   + SV+CG++ T  +T SG+ + +G N++G   +G     +   P ++   L+ 
Sbjct: 750 EALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQ--LGIDTMENQLAPVQVRGGLER 807

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--------NL----QNVSQPKEVE 416
               ++ CG +HT  + +   LF +G   +G LG G        NL    Q  S  + ++
Sbjct: 808 QECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLID 867

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L G  +  +ACG +HT A+ D            G ++ +G  + G+LG  D   ++ P 
Sbjct: 868 ELEGKDIVRIACGCYHTIAVSD-----------NGVMYVFGRNNHGQLGTGDTTERVYPF 916

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTG 501
            +   V       + G   TV LTG
Sbjct: 917 PIDDFVGKRVALVAAGFYHTVVLTG 941



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 120/276 (43%), Gaps = 19/276 (6%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+++ G N++G    G+  SR  +   +    L    + ++  G  HT +++  G++FT 
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSF---ERIQALQQKEIIQIGAGNEHTVVLTADGKVFTC 619

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           G    G  G G    VS   E+  +  G        G  HT  +           +  G+
Sbjct: 620 GYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILV-----------STDGR 668

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT---GLGKVYTMG 509
           + T G   +G+LGH +   + +P  +  L +      SC    TV       L  +YT G
Sbjct: 669 VATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFG 728

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              +GQLG+  + DR I      L ++ +  ++ G YH  V+T+ G  + +GKN  GQLG
Sbjct: 729 RNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLG 788

Query: 570 LGDSQERETPTFVEALRDRQ-VESVVCGSSITAAIC 604
           +   + +  P  V    +RQ    + CG   T A+C
Sbjct: 789 IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC 824



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 2/72 (2%)

Query: 501 GLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           G  +V++ G   +G+LG+   A  +S   ++   ++E ++ I +G+ H  VLT+ G V+T
Sbjct: 560 GEREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQ-IGAGNEHTVVLTADGKVFT 618

Query: 560 WGKNANGQLGLG 571
            G N NGQ G G
Sbjct: 619 CGYNDNGQCGQG 630


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 136/275 (49%), Gaps = 19/275 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE 309
           L+P+L +  ++     IS G++H+  ++  G+V  WG+   G+LGH    + V  PK+V 
Sbjct: 83  LIPELQDYVII----QISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVR 138

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDG 368
            L    V  ++CG   + ALT  GE+Y+WG N +G   V      +H   P +L  TL G
Sbjct: 139 QLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRL-TTLLG 197

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           + ++ +ACG  H+ ++S SG +F +G    G LG  +  N + P ++++LR L V+  AC
Sbjct: 198 IPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAAC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G   +  + +            G +FT G    G+LGH     ++LP  V  L+     Q
Sbjct: 258 GDEFSVFLTN-----------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQ 306

Query: 489 ASCGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAK 522
            +CG   T+      GKVY  G    GQLG    K
Sbjct: 307 VACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTK 341



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 175/371 (47%), Gaps = 33/371 (8%)

Query: 219 KDVMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           K++  WG    G LG  +GG  D  +         L P+ +       VQ +S G +H  
Sbjct: 5   KELYCWGSTSHGQLG--LGGIEDEQI---------LTPRQIPWTPDTAVQQVSCGHRHTL 53

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            +T  G+V+  G     +LGH  ++    P+L+  L    +  +SCG   + AL+  G++
Sbjct: 54  FLTATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQV 111

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            +WG N+ G   +G    +      K+   L    V ++ACG  H+  +++ G+L+++G 
Sbjct: 112 LSWGDNDCGQ--LGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169

Query: 396 GTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
             +G LG     +L + + P  + +L G+ + ++ACG  H+  I           +  G 
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLI-----------SKSGA 218

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +F WG  + G+LG  D   +  PT +  L       A+CG   +V LT  G V+T G+  
Sbjct: 219 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGA 278

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLG 571
           +GQLG+  + +  +  +  +L    +  ++ G+ H +A + S G VY +G  ++GQLG  
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTR 338

Query: 572 DSQERETPTFV 582
            ++    P  V
Sbjct: 339 STKSLMLPQVV 349



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 145/332 (43%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P+ +       VQ VSCG   T  LT +G++Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 340 HNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++   G DL  +R         +L   L    + +++CG  H+  +S  GQ+ ++GD 
Sbjct: 66  SNDYSQLGHDLPTKRP--------QLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH   + + Q PK V  L    V  +ACG  H+ A+              G+L++
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC-----------GELYS 166

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V+    L     P  +T L+       +CG   +  ++  G V+  G  
Sbjct: 167 WGSNIYGQLG-VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +R+       L+   V+  + G      LT+ G V+T G  A GQLG G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A 
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAF 317



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 16/191 (8%)

Query: 448 AIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           A G +L+ WG    G+  LG ++ E+ L P  +    D    Q SCG   T+ LT  GKV
Sbjct: 2   ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKV 61

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  + QLG+     R   + E  L++  +  IS GS H   L+  G V +WG N  
Sbjct: 62  YACGSNDYSQLGHDLPTKRPQLIPE--LQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119

Query: 566 GQLGLGDSQE-RETPTFVEALRDRQVESVVCGSSITAAIC-----------LHKSISVGD 613
           GQLG    +E  + P  V  L  + V  + CG++ + A+            ++  + V  
Sbjct: 120 GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 614 QSSCSQCRMPF 624
            +  + C  P 
Sbjct: 180 PNDLTHCNYPL 190


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 44/337 (13%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLV---ECLSGINVQSVSCGEFQTCALTKSGE-IY 336
           G V+ WG    G+ G K N  +  P  +      + I ++ ++CG+  + A+ +    +Y
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR------VSKVACGEWHTAIVSTSGQL 390
           +WG N  G    G++ +R+   P  L +   G         S VACG  H+ IVS  G+L
Sbjct: 157 SWGVNRWGQLGHGDQLNRNQ--PTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +T+G GT G LGHG+ Q   +P  V SL G  + SVA G  H++ +         SN   
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCV--------DSN--- 263

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPT----------------CVTRLVDFDFVQASCGRM 494
           GK+++WG    G+LG+   + + LPT                    L+  +F++  CG+ 
Sbjct: 264 GKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKN 323

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTS 553
            T+ L+  G+V   G    GQLGN    D+   V   K++  E V  I+SG YH   LT 
Sbjct: 324 HTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPV---KIEFNEHVIDIASGYYHSLCLTD 380

Query: 554 GGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQ 589
            G  Y+WG  ++G LGLG+    +T P  +  +  R 
Sbjct: 381 NGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIRH 417



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 146/347 (42%), Gaps = 64/347 (18%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G++H+ +V+  GE++ +G G  GRLGH        P  V  L G ++ SV+ G   +
Sbjct: 198 VACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHS 257

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-------KLFDT--------LDGVRV 371
             +  +G+IY+WG N +G   +G    +S  LP        KL D         L  +  
Sbjct: 258 SCVDSNGKIYSWGWNRYGQ--LGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNF 315

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            KV CG+ HT  +S+SG++  +G    G LG+GN  +   P ++E      V  +A G +
Sbjct: 316 IKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEFNE--HVIDIASGYY 373

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD-----GERKLLPTCVTRLVDFDF 486
           H+  + D            G+ ++WG    G LG  +      + KL+P    R      
Sbjct: 374 HSLCLTD-----------NGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIR------ 416

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-------EEFVK 539
                    T       ++Y          G         T+ + KL         + V 
Sbjct: 417 ------HCFTDSNDAFNEIY----------GRQDENTTQETIDQHKLYLSKKYSVGDTVD 460

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
            IS+G+++ A++TS G ++ +G     + G     +++ P  VE  +
Sbjct: 461 MISAGAWNSAIITSSGKLFCFGFGDTYRNGNQSEFDQDMPIIVEPTK 507



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 41/193 (21%)

Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           QN    D    +     + L+   +  G  H   ++  GEV  +G    G+LG+  +MD 
Sbjct: 294 QNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQ 353

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE---RRSRSHWLP 359
             P  +E     +V  ++ G + +  LT +GE Y+WG+ + G+  +GE    +++   +P
Sbjct: 354 LYPVKIEFNE--HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIP 411

Query: 360 ----RKLF--------------------DTLD------------GVRVSKVACGEWHTAI 383
               R  F                    +T+D            G  V  ++ G W++AI
Sbjct: 412 LVHIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAI 471

Query: 384 VSTSGQLFTYGDG 396
           +++SG+LF +G G
Sbjct: 472 ITSSGKLFCFGFG 484



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 13/159 (8%)

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFV--QASCG--RMLTVGLTGLGK 504
           GG ++ WG    G+ G    +   +PT +    +D   +  Q +CG    L +     G 
Sbjct: 96  GGLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYG- 154

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVV-------EGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           VY+ G    GQLG+    +R+   +        G         ++ GS H  ++++ G +
Sbjct: 155 VYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           YT+G    G+LG GD Q +  PT V +L  + + SV  G
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAG 253


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 14/213 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
           +  I+ G  H+  ++K GE+F WG+   G+LG  ++   +  P+ VE LSG+ +  +S G
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + AL+ SG +Y+WG N+ G   +G         P  L +TLD  +V  +ACG  HTA
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGED--FP-SLIETLDNQQVEFLACGGSHTA 267

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++T G +FT+G G +G LGH + QN  +P+ V  L G +V  +ACG  HT A V  +  
Sbjct: 268 LLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL-- 325

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                   GK+F++G   +G+LG+     +L+P
Sbjct: 326 --------GKVFSFGSGKEGQLGNGGTHNQLIP 350



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 32/335 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + + ++  GA+H  +++ +G+ F            + N  +   +    L   ++  ++C
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPF------------EYNYSIEHARFQCILQEKSIIQIAC 156

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G++ + AL+K GE++ WG N HG   VG R   S   P+ + + L GV + +++ G+ H+
Sbjct: 157 GDYHSLALSKGGELFAWGQNLHGQLGVG-RLFASIPTPQAV-EHLSGVPLVQISAGKAHS 214

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S SG ++++G    G LG G+      P  +E+L   +V+ +ACG  HTA +     
Sbjct: 215 MALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALL----- 269

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LT 500
                    G +FT+G    G+LGH   + +L P  VT L      Q +CGR  T+  ++
Sbjct: 270 ------TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVS 323

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVY 558
            LGKV++ GS   GQLGN    ++ I +       E +K  S  S    V+ +GG  SV 
Sbjct: 324 DLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVL 383

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            W +  N  + L     R+ PT  E    R +  V
Sbjct: 384 LWMEKKNPYVNL----RRKIPTLNEGTVKRWIADV 414



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 106/248 (42%), Gaps = 28/248 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   Q + Q K         +  +AC
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQCILQEK--------SIIQIAC 156

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT--CVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG V      +PT   V  L     
Sbjct: 157 GDYHSLAL-----------SKGGELFAWGQNLHGQLG-VGRLFASIPTPQAVEHLSGVPL 204

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G+  ++ L+  G VY+ G    GQLG           +   L  + V+ ++ G  
Sbjct: 205 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGS 264

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-- 604
           H A+LT+ G V+T+G    GQLG   +Q    P  V  L   +V  + CG   T A    
Sbjct: 265 HTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSD 324

Query: 605 LHKSISVG 612
           L K  S G
Sbjct: 325 LGKVFSFG 332



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           +V  WG   LG    G  DG             P L+E+     V+ ++ G  H AL+T 
Sbjct: 222 NVYSWGRNDLGQLGLGHTDGED----------FPSLIETLDNQQVEFLACGGSHTALLTT 271

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTW 338
           +G VF +G GK G+LGH    +   P+LV  L+G  V  ++CG   T A ++  G+++++
Sbjct: 272 DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSF 331

Query: 339 GHNNHGADLVGERRSRSHWLPRKL 362
           G    G    G   ++   LP KL
Sbjct: 332 GSGKEGQLGNGGTHNQLIPLPMKL 355


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 214/517 (41%), Gaps = 76/517 (14%)

Query: 132 SPSLSLSER-----CFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSPHM-----ETEN 181
           +P L L +R     C  D L   +DS + S   S     L  +  P    +     +T  
Sbjct: 336 APLLPLLQRFQSMACGKDALHAEADSHFLSGPLSPNESFLRYLTLPQDNDLAIDLQQTAV 395

Query: 182 FMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSV 241
            +   L+   T C        + P   SP    K  L++V+ WG  ++G           
Sbjct: 396 VVMAHLDRLATPC--------MPPLCSSP-ASHKGSLQEVIGWG--LIGW---------- 434

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
              K   + + P        L V  I+   K   ++++ G V+              + D
Sbjct: 435 ---KYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYT----------QAYSSD 481

Query: 302 VSCPKLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
              P+LV+ L   N+  ++         AL  +GE+Y+WG  + G      R      +P
Sbjct: 482 ALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG------RLGHGDTVP 535

Query: 360 R---KLFDTL----DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
               KL         G RV  +ACG  ++A ++  G+L+T+G G +G LGHG+ ++ + P
Sbjct: 536 LEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 413 KEVESLRGLKVKSVACGP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
             V  L+GLKV  VACG     T A+ +            G++++WGD D G+LG    +
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTE-----------NGQVWSWGDGDYGKLGRGGSD 644

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVV 529
               P  V +L D D V+  CG   +V LT  G+VY+ G   + +LG+   +  R   ++
Sbjct: 645 GCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL 704

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           EG L+ + V  +++GS H   LT    V++WG N   Q        +  P  +  L  + 
Sbjct: 705 EG-LQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKPEPAALPGLDTKH 763

Query: 590 VESVVCG--SSITAAICLHKSISVGDQSSCSQCRMPF 624
           +  + CG   S   + C   SI +        C M F
Sbjct: 764 IVGIACGPAQSFAWSSCSEWSIGLRVPFVVDVCSMTF 800


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 154/349 (44%), Gaps = 37/349 (10%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH--KVNMDVSCPKLVECLSGINVQS 318
            M  V N+S G  H A +T+ G V+ WG    G LGH  K  +    PK V       V+ 
Sbjct: 874  MRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKE 933

Query: 319  VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
            V CG   T A T+SG +Y WG+   G   +G+R    HWLP  +  TL  + V+++A G 
Sbjct: 934  VVCGGEHTLARTESGSVYGWGNGRIGQLGLGDR--TLHWLPVPI-KTLRKMHVTQLAAGY 990

Query: 379  WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             HT +V  SG++  +G G  G LG G  +++  P +++++    +   ACG  HTA + +
Sbjct: 991  AHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMP--SIVQAACGYCHTALLTE 1048

Query: 439  IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRMLT 496
                        G+++T G A  G+LGH D  +  +L P  V  L        +CG   T
Sbjct: 1049 -----------AGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHT 1097

Query: 497  VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG--------ISSGSYHV 548
            + +T L  VYT G  V G   +   +      +  ++    VKG        +S G  H 
Sbjct: 1098 IAITDLDNVYTWG-GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHS 1156

Query: 549  AVLTSGGSVYTWGKNANGQLGL--------GDSQERETPTFVEALRDRQ 589
               T  G VY W    + Q  L          S   E P  V A+ D Q
Sbjct: 1157 VATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 161/328 (49%), Gaps = 39/328 (11%)

Query: 316  VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
            V +VSCG     ALT++G +YTWG N  G    G++       P+++        V +V 
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVI-FFKSKCVKEVV 935

Query: 376  CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            CG  HT   + SG ++ +G+G  G LG G+      P  +++LR + V  +A G  HT  
Sbjct: 936  CGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIV 995

Query: 436  IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGR 493
            ++             G++  +G  + G+LG   G RK  L+PT +  +     VQA+CG 
Sbjct: 996  VLK-----------SGEVMVFGGGEVGQLG--TGMRKDLLVPTKLQAMP--SIVQAACGY 1040

Query: 494  MLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDR-SITVVEGKLKEEFVKGISSGSYHVAV 550
              T  LT  G+VYT GSA+ GQLG+      DR +  +VEG L  + ++ I+ GS+H   
Sbjct: 1041 CHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEG-LNGKRIRFIACGSFHTIA 1099

Query: 551  LTSGGSVYTW----GKNANGQLGLGDSQERE-------TPTFVEALRDRQVESVVCGSSI 599
            +T   +VYTW    G +++G +     QER+       TP+ V+ L  +++  V CG + 
Sbjct: 1100 ITDLDNVYTWGGVQGTDSDGAM----RQERKAAILKRVTPSIVKGLMGKRISLVSCGHAH 1155

Query: 600  TAAICLHKSISVGDQSSCSQCRMPFGFR 627
            + A  +   + V   SS    + P   R
Sbjct: 1156 SVATTMDGEVYV--WSSTGSLQPPLLLR 1181



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 153/352 (43%), Gaps = 54/352 (15%)

Query: 218  LKDVMIWGEGVLG----GDIGGAVDGSVSQNKTQVDAL--LPKLLESAVMLDVQNISLGA 271
            +K+V+  GE  L     G + G  +G + Q       L  LP  +++   + V  ++ G 
Sbjct: 931  VKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGY 990

Query: 272  KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
             H  +V K GEV  +G G+ G+LG  +  D+  P  ++ +  I VQ+ +CG   T  LT+
Sbjct: 991  AHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSI-VQA-ACGYCHTALLTE 1048

Query: 332  SGEIYTWGHN-----NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            +GE+YT G        H  +L  +R      L  K+ + L+G R+  +ACG +HT  ++ 
Sbjct: 1049 AGEVYTCGSAMSGQLGHADNLQNDR------LAPKMVEGLNGKRIRFIACGSFHTIAITD 1102

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQ--------PKEVESLRGLKVKSVACGPWHTAAIVD 438
               ++T+G G  G    G ++   +        P  V+ L G ++  V+CG  H+ A   
Sbjct: 1103 LDNVYTWG-GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVA--- 1158

Query: 439  IMVDRCKSNAIGGKLFTW---GDADKGRLGHVDG--------ERKLLPTCVTRLVDFD-- 485
                      + G+++ W   G      L    G        E  LL + +    D    
Sbjct: 1159 --------TTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSK 1210

Query: 486  --FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
                 A+ G   T+ +T  G +Y+ GS   GQLG     DR+  V   K +E
Sbjct: 1211 PVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEE 1262


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   + + P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIVHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G  L       S  +PR L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDQGQLFSWGAGSDG-QLGLMTIEDSVAVPR-LIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  V  G  H+ A+      
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G   +G  R  +   P ++   L    +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKGQ--LGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG   +++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGRN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q   G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSD-----------QGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    + V    +G
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVV----AG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +     +    +P+L++      +  +S G  H   +  +G+ F WG    G+
Sbjct: 109 GAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V  G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFV----------PSSGLIYAFGCGARGQLG 328


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 14/213 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
           +  I+ G  H+  ++K GE+F WG+   G+LG  ++   +  P+ VE LSG+ +  +S G
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + AL+ SG +Y+WG N+ G   +G         P  L +TLD  +V  +ACG  HTA
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGED--FP-SLIETLDNQQVEFLACGGSHTA 224

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++T G +FT+G G +G LGH + QN  +P+ V  L G +V  +ACG  HT A V  +  
Sbjct: 225 LLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL-- 282

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                   GK+F++G   +G+LG+     +L+P
Sbjct: 283 --------GKVFSFGSGKEGQLGNGGTHNQLIP 307



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 32/335 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + + ++  GA+H  +++ +G+ F            + N  +   +    L   ++  ++C
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPF------------EYNYSIEHARFQCILQEKSIIQIAC 113

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G++ + AL+K GE++ WG N HG   VG R   S   P+ + + L GV + +++ G+ H+
Sbjct: 114 GDYHSLALSKGGELFAWGQNLHGQLGVG-RLFASIPTPQAV-EHLSGVPLVQISAGKAHS 171

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S SG ++++G    G LG G+      P  +E+L   +V+ +ACG  HTA +     
Sbjct: 172 MALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALL----- 226

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LT 500
                    G +FT+G    G+LGH   + +L P  VT L      Q +CGR  T+  ++
Sbjct: 227 ------TTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVS 280

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVY 558
            LGKV++ GS   GQLGN    ++ I +       E +K  S  S    V+ +GG  SV 
Sbjct: 281 DLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVL 340

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            W +  N  + L     R+ PT  E    R +  V
Sbjct: 341 LWMEKKNPYVNL----RRKIPTLNEGTVKRWIADV 371



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 106/248 (42%), Gaps = 28/248 (11%)

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           +++  V  G  H  I+S+ G+ F Y       + H   Q + Q K         +  +AC
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPFEYNYS----IEHARFQCILQEK--------SIIQIAC 113

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT--CVTRLVDFDF 486
           G +H+ A+           + GG+LF WG    G+LG V      +PT   V  L     
Sbjct: 114 GDYHSLAL-----------SKGGELFAWGQNLHGQLG-VGRLFASIPTPQAVEHLSGVPL 161

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           VQ S G+  ++ L+  G VY+ G    GQLG           +   L  + V+ ++ G  
Sbjct: 162 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGS 221

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-- 604
           H A+LT+ G V+T+G    GQLG   +Q    P  V  L   +V  + CG   T A    
Sbjct: 222 HTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSD 281

Query: 605 LHKSISVG 612
           L K  S G
Sbjct: 282 LGKVFSFG 289



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 17/210 (8%)

Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WG+  L G +G G +  S+           P+ +E    + +  IS G  H+  ++
Sbjct: 126 ELFAWGQN-LHGQLGVGRLFASIPT---------PQAVEHLSGVPLVQISAGKAHSMALS 175

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G V+ WG    G+LG         P L+E L    V+ ++CG   T  LT  G ++T+
Sbjct: 176 MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 235

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
           G   +G   +G   +++   PR L   L G RV+++ACG  HT A VS  G++F++G G 
Sbjct: 236 GAGKYGQ--LGHNSTQNELRPR-LVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 292

Query: 398 FGVLGHGNLQN--VSQPKEVESLRGLKVKS 425
            G LG+G   N  +  P ++ S   LK +S
Sbjct: 293 EGQLGNGGTHNQLIPLPMKLPSNEELKFES 322


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 157/342 (45%), Gaps = 22/342 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G  + G + Q       +    ++S  +  V ++S    HAA V + GEVF  G+     
Sbjct: 135 GSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFVMQSGEVFTCGDNSSSC 194

Query: 294 LGHK-VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
            GH+     +  P+LVE L GI  + V+ G   T  LT+ G +YT G N HG    G+ +
Sbjct: 195 CGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQ 254

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      K+ + L    V ++A G  +   V+ +G ++++G G    LGHG   +  QP
Sbjct: 255 DRP---TPKMIEVLS--SVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQP 309

Query: 413 KEVESLR--GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
           + ++  R  G+ +  V+ G  H  A+         SN   G ++TWG    G LGH D  
Sbjct: 310 RPIQKFRRKGIHIVRVSAGDEHAVAL--------DSN---GFVYTWGKGYCGALGHGDEI 358

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITV 528
            K  P  +T L +   VQ    +  T  L   G VY  GS   G LG  + +  D+ +  
Sbjct: 359 EKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKP 418

Query: 529 -VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +   L+   V  IS+G YH  V+TS G ++ +G N   QLG
Sbjct: 419 RILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLG 460



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 21/284 (7%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N+Q ++ G++ T  ++ S  +Y+ G    G  ++G+    +  +     D+    RV  V
Sbjct: 113 NMQ-ITTGKYHTLLISNS-SVYSCGSGLCG--VLGQGSETTQCVAFTRIDSPPLPRVVHV 168

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHT 433
           +    H A V  SG++FT GD +    GH +  + + +P+ VESL+G+  K VA G   T
Sbjct: 169 SASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFT 228

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
             +              G ++T G    G+LGH D + +  P  +  L     VQ + G 
Sbjct: 229 VFLTR-----------QGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGP 275

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAVL 551
              + +T  G VY+ GS  +  LG+ +  D  +   + + + K   +  +S+G  H   L
Sbjct: 276 SYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVAL 335

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
            S G VYTWGK   G LG GD  E+ TP  + +L++ Q+   VC
Sbjct: 336 DSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKN-QLAVQVC 378



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 144/350 (41%), Gaps = 36/350 (10%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS-------- 318
           I+ G  H  L++    V+  G G  G LG          +  +C++   + S        
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLCGVLGQG-------SETTQCVAFTRIDSPPLPRVVH 167

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           VS        + +SGE++T G N+  +   G R +       +L ++L G+   +VA G 
Sbjct: 168 VSASFNHAAFVMQSGEVFTCGDNS--SSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGL 225

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             T  ++  G ++T G  T G LGHG+ Q+   PK +E L    V  +A GP +  ++ +
Sbjct: 226 NFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS--SVVQIAAGPSYILSVTE 283

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLT 496
                       G ++++G      LGH +   +L P  + +        V+ S G    
Sbjct: 284 -----------NGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHA 332

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           V L   G VYT G    G LG+    +++   +   LK +    + +      VL + GS
Sbjct: 333 VALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGS 392

Query: 557 VYTWGKNANGQLGLGD---SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           VY +G    G LG  D   S +   P  ++ LR   V  +  G   T  I
Sbjct: 393 VYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVI 442



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 17/269 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+ES   +  + ++ G      +T++G V+  G    G+LGH    D   PK++E LS
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS 266

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             +V  ++ G     ++T++G +Y++G   +     GE+       P + F    G+ + 
Sbjct: 267 --SVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRR-KGIHIV 323

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +V+ G+ H   + ++G ++T+G G  G LGHG+    + P+ + SL+      V      
Sbjct: 324 RVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRK 383

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFVQA 489
           T  +V+            G ++ +G    G LG +D    ++ L P  +  L      Q 
Sbjct: 384 TFVLVN-----------SGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQI 432

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           S G   TV +T  G+++  G     QLG+
Sbjct: 433 STGLYHTVVITSRGQIFGFGDNERAQLGH 461



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 80/154 (51%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + +  +S G +HA  +   G V+ WG+G  G LGH   ++ + P+L+  L       V  
Sbjct: 320 IHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCA 379

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
            + +T  L  SG +Y +G    G+    +RR     L  ++ DTL    VS+++ G +HT
Sbjct: 380 RKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHT 439

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            ++++ GQ+F +GD     LGH  L++  +P ++
Sbjct: 440 VVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQI 473



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 22/248 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +    TQ D   PK++E  V+  V  I+ G  +   VT+ G V+ +G G +  
Sbjct: 241 GTNTHGQLGHGDTQ-DRPTPKMIE--VLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 294 LGHKVNMDVSCPKLVECL--SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           LGH    D   P+ ++     GI++  VS G+    AL  +G +YTWG    GA   G+ 
Sbjct: 298 LGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDE 357

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ---N 408
             ++     +L  +L      +V   +  T ++  SG ++ +G   FG LG  + +    
Sbjct: 358 IEKT---TPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDK 414

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
           V +P+ +++LR   V  ++ G +HT  I              G++F +GD ++ +LGH  
Sbjct: 415 VLKPRILDTLRAHHVSQISTGLYHTVVITS-----------RGQIFGFGDNERAQLGHDT 463

Query: 469 GERKLLPT 476
               L PT
Sbjct: 464 LRSCLEPT 471



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 223 IWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGE 282
           ++G G +G    G +D  VS        L P++L++     V  IS G  H  ++T  G+
Sbjct: 393 VYGFGSMGFGSLGFLDRRVSDK-----VLKPRILDTLRAHHVSQISTGLYHTVVITSRGQ 447

Query: 283 VFCWGEGKDGRLGH 296
           +F +G+ +  +LGH
Sbjct: 448 IFGFGDNERAQLGH 461


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 27/330 (8%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
            +SL   H   +  +G V+ WG    G+LG   +   S P  V  L+G+ +  ++ GE  T
Sbjct: 709  VSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM--IAGGENHT 766

Query: 327  CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             AL   G ++TWG+N +G   +G+  + + + P ++  TL     + V+ GE H+  + +
Sbjct: 767  VALRSDGTLHTWGYNGYG--QLGDDSTTTRYSPVQV-STL--TNWTAVSAGENHSLALKS 821

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
             G ++ +G   +G LG G   +   P +V+ L G  V ++A G   + A+        KS
Sbjct: 822  DGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL--------KS 871

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
            +   G +++WG    G LG+    R  +P  V  L D   + A  G    V L   G V+
Sbjct: 872  D---GTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGSVF 926

Query: 507  TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
              G   +G+LGN     +S  V  G      +KGI++G YH   L S G+V++WG N  G
Sbjct: 927  AWGYNGNGELGNSSTISQSTPVQSGVTG---IKGIAAGPYHTLALKSDGTVWSWGYNGYG 983

Query: 567  QLGLGDSQERETPTFVEALRDRQVESVVCG 596
            QLG G++  R  P  +  L    + S+  G
Sbjct: 984  QLGNGNNTSRSVPAAIPGL--ASIASIAAG 1011



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+   G ++G         N T   + +P  ++ A++ DV+ I+ G  H   + K+
Sbjct: 875  VWSWGQNTYG-ELG---------NGTTTRSSVP--VQVALLTDVKAIAAGDYHGVALKKD 922

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWG 339
            G VF WG   +G LG+   +  S P      SG+  ++ ++ G + T AL   G +++WG
Sbjct: 923  GSVFAWGYNGNGELGNSSTISQSTP----VQSGVTGIKGIAAGPYHTLALKSDGTVWSWG 978

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            +N +G    G   SRS  +P  +        ++ +A GE  +      G L+++G    G
Sbjct: 979  YNGYGQLGNGNNTSRS--VPAAIPGL---ASIASIAAGENQSIAYGNDGILYSWGRNANG 1033

Query: 400  VLGHGNLQNVSQPKEV 415
             LG+G   + + P +V
Sbjct: 1034 QLGNGTTVDTNVPHKV 1049


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 21/317 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ LE+   L +   + G +H+ L+     V+  G+   G+LG K       P+ ++ LS
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 71

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            +++  VSCG+  + A+   G ++TWG  + G   +GE +  S ++P K+ ++L G+++ 
Sbjct: 72  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKI-NSLAGIKII 129

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V+CG +H+  +S  GQ+F++G    G LG G NL + + P++V+SL G+ +  VA G  
Sbjct: 130 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 189

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQ 488
           H+ A+           ++ G  F WG+   G+L   G+   E+   P  +  L   + V 
Sbjct: 190 HSFAL-----------SLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVY 238

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH 547
            SCG   T  LT  G+V+T G +   QL + P++      ++EG      V  I  GSYH
Sbjct: 239 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSYH 296

Query: 548 -VAVLTSGGSVYTWGKN 563
            +A + + G V + G+ 
Sbjct: 297 TIAYVYTTGQVVSLGRG 313



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 22/321 (6%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+ +E  +G+ +   + GE  +  L  +  +Y+ G N+ G   +G++  +S   P  +  
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQ--LGQKSPQSTKRPEPI-Q 68

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKV 423
            L  V +  V+CG+ H+  V   G++FT+G G+ G LG G  + +S  P ++ SL G+K+
Sbjct: 69  ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKI 128

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE-RKLLPTCVTRLV 482
             V+CG +H+ A+ +            G++F+WG   +G+LG  +    +  P  V  L 
Sbjct: 129 IQVSCGHYHSLALSE-----------DGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 177

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVK 539
                Q + G   +  L+ +G  +  G+   GQL   GN   +        G LK   V 
Sbjct: 178 GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 237

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS-- 597
            IS G  H +VLT  G V+T+G +++ QL       R  P  +E +    V  + CGS  
Sbjct: 238 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGI-GGHVSQIECGSYH 296

Query: 598 SITAAICLHKSISVGDQSSCS 618
           +I       + +S+G   SC+
Sbjct: 297 TIAYVYTTGQVVSLGRGPSCT 317



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 11/218 (5%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G          +G +   +++  + +P  + S   + +  +S G  H+  ++++
Sbjct: 94  VFTWGAGS---------EGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSED 144

Query: 281 GEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G+VF WG  + G+LG   N+   + P+ V+ L GI +  V+ G   + AL+  G  + WG
Sbjct: 145 GQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWG 204

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +N  G   +    ++           L  + V  ++CG  HT++++  GQ+FT+G  +  
Sbjct: 205 NNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSE 264

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            L H        P+ +E + G  V  + CG +HT A V
Sbjct: 265 QLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 301



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
           QP+ +E+  GLK+   A G  H+  +         SN    ++++ GD  +G+LG    +
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLF--------SNH---RVYSCGDNSRGQLGQKSPQ 59

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
               P  +  L        SCG+  +V +   G+V+T G+   GQLG  ++K+ S    +
Sbjct: 60  STKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTK 119

Query: 531 -GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDR 588
              L    +  +S G YH   L+  G V++WG N  GQLGLG++   + +P  V++L   
Sbjct: 120 INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 179

Query: 589 QVESVVCGSSITAAICL 605
            +  V  G + + A+ L
Sbjct: 180 PLAQVAAGGTHSFALSL 196


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 32/344 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK ++    + + ++  GA+H  +++ +G+ F            + N  +   +    L 
Sbjct: 33  PKCIKLGRKMKIHSMDQGAEHLLVLSSDGKPF------------EYNYSIEHARFQCVLQ 80

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             N+  ++CG++ + AL+K GE++ WG N +G   VG  R+ +     ++ + L GV + 
Sbjct: 81  EKNIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVG--RTFASTPTPQIVEHLSGVPLV 138

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           +++ GE H+  +S S  ++++G    G LG G+  N   P  +E+L   +V+ +ACG  H
Sbjct: 139 QISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSH 198

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TA +              G +FT+G    G+LGH   + +L P  VT LV     Q +CG
Sbjct: 199 TALLTK-----------DGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACG 247

Query: 493 RMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           R  T+  ++ LGKV++ GS   GQLGN     + I +       E +K  S  S    ++
Sbjct: 248 RRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFESHTSEKELIM 307

Query: 552 TSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +GG  S+  W +  N  + L     R+ PT  E    R +  V
Sbjct: 308 IAGGNQSILLWMEKENPYVNL----RRKIPTLNEGTVKRWIADV 347



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 19/220 (8%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   G    G +   +T      P+++E    + +  IS G  H+  ++    V+ W
Sbjct: 100 GGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEAHSMALSMSRNVYSW 159

Query: 287 GEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
           G    G+LG  H  N D   P L+E L    V+ ++CG   T  LTK G ++T+G    G
Sbjct: 160 GRNDCGQLGLGHTNNKD--SPSLIEALDNQEVEFLACGGSHTALLTKDGLVFTFGAGKCG 217

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGH 403
              +G   +++   P  L   L G RV+++ACG  HT A VS  G++F++G G  G LG+
Sbjct: 218 Q--LGHNSTQNELTP-CLVTELVGKRVTQIACGRRHTLAYVSDLGKVFSFGSGEGGQLGN 274

Query: 404 G--NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           G  + Q +  P ++ S   LK +S      HT+    IM+
Sbjct: 275 GATHHQLIPLPMKLPSNEELKFES------HTSEKELIMI 308



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 115/273 (42%), Gaps = 37/273 (13%)

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G+D  G R+ +   L RK+       ++  +  G  H  ++S+ G+ F Y       + H
Sbjct: 26  GSD--GTRKPKCIKLGRKM-------KIHSMDQGAEHLLVLSSDGKPFEYNYS----IEH 72

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
              Q V Q K         +  + CG +H+ A+           + GG+LF WG    G+
Sbjct: 73  ARFQCVLQEK--------NIIQITCGDYHSLAL-----------SKGGELFAWGQNTYGQ 113

Query: 464 LGHVDGERKLLPT--CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           LG V       PT   V  L     VQ S G   ++ L+    VY+ G    GQLG    
Sbjct: 114 LG-VGRTFASTPTPQIVEHLSGVPLVQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHT 172

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
            ++    +   L  + V+ ++ G  H A+LT  G V+T+G    GQLG   +Q   TP  
Sbjct: 173 NNKDSPSLIEALDNQEVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTPCL 232

Query: 582 VEALRDRQVESVVCGSSITAAIC--LHKSISVG 612
           V  L  ++V  + CG   T A    L K  S G
Sbjct: 233 VTELVGKRVTQIACGRRHTLAYVSDLGKVFSFG 265



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGIS 542
           + +Q +CG   ++ L+  G+++  G   +GQLG  +    + T  +VE       V+ IS
Sbjct: 83  NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQ-IS 141

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +G  H   L+   +VY+WG+N  GQLGLG +  +++P+ +EAL +++VE + CG S TA 
Sbjct: 142 AGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTAL 201

Query: 603 ICLHKSISVGDQSSCSQ 619
           +     +       C Q
Sbjct: 202 LTKDGLVFTFGAGKCGQ 218


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 171/378 (45%), Gaps = 68/378 (17%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           +E +V+ WG G DG+LG     D   P+L+   S  ++  ++CG     ALT  G+++TW
Sbjct: 13  EEQQVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTW 72

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  + G   +G     +  LP KL    DG  +++ A G  H+  VS SG LFT G+G+F
Sbjct: 73  GRGSSGQ--LGHGDILNITLP-KLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSF 129

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV--------------------- 437
           G LGHG+  ++  P +V       VK VACG  H+  ++                     
Sbjct: 130 GQLGHGDNMSLRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSD 189

Query: 438 ---------------DIMVDRCKSN-------AIGGKLFTWGDADKGRLGHVDGERKLLP 475
                          D+ V R  +N       +  G+ F+WG       G   G     P
Sbjct: 190 GTKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGR------GFCAGPDVQTP 243

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
            C+   + F  V       L   LT  G+V+ +G+ ++ Q   P+ +   I   E  L +
Sbjct: 244 QCLPSSLSFRKVAVGWNHALL--LTVDGEVFKLGNTLNKQ---PEKQQLQIDSSEALLAK 298

Query: 536 --EF----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA----L 585
             +F    V  I++G+ H A +T  G V TWG   +GQLGLG++ ++ +P  V      L
Sbjct: 299 VSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQLVSVGSIDL 358

Query: 586 RDRQVESVVCGSSITAAI 603
           R ++++ V CGS  T A+
Sbjct: 359 RTKEIK-VYCGSGFTYAV 375


>gi|55742244|ref|NP_001006906.1| NIMA-related kinase 8 [Xenopus (Silurana) tropicalis]
 gi|49670682|gb|AAH75274.1| NIMA (never in mitosis gene a)- related kinase 8 [Xenopus
           (Silurana) tropicalis]
          Length = 697

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 154/338 (45%), Gaps = 41/338 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G            +S P  +  L+   VQ VS G  Q   +TKSG +  W    
Sbjct: 321 VYTWGSG------------ISTPLRLPMLNTEVVQ-VSAGRTQKAGVTKSGRLIMWEATP 367

Query: 343 HGADLVGERRSRSHWLPR---KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            G        S  H  P+   +  +   GV +  V+CG+  TA ++  G + T+G G+ G
Sbjct: 368 VGTGAPSLPGSIEHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 427

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGH N  +V+QPK VE L G ++  V+CG  H  A+         SN    ++F+WG  
Sbjct: 428 CLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAV---------SNE--KEVFSWGRG 476

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-- 517
           D GRLG    E    P  V    +++  +  CG   ++ LT   ++   GS    +LG  
Sbjct: 477 DNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGIDSSMILTVANQLLACGSNRFNKLGFD 536

Query: 518 ------NPKAKDR-----SITVVE-GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
                  P ++D+     + T ++   L +E +     G+ H AV+T+ G  YT+G N +
Sbjct: 537 RILSASEPSSEDQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFGSNQH 596

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG    +    P  V AL+  +V  V CG + T A+
Sbjct: 597 GQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAV 634



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 10/300 (3%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W E    G    ++ GS+   + Q    + + LE    + ++++S G    A +T  
Sbjct: 360 LIMW-EATPVGTGAPSLPGSIEHAQPQ---FISRFLEGQSGVTIKHVSCGDLFTACLTDR 415

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DV+ PK+VE L G  +  VSCG     A++   E+++WG 
Sbjct: 416 GIIMTFGSGSNGCLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAVSNEKEVFSWGR 475

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            ++G   +G + S +   P+++    +     +V CG   + I++ + QL   G   F  
Sbjct: 476 GDNGRLGLGSQESYNS--PQQVIIPPE-YEAQRVVCGIDSSMILTVANQLLACGSNRFNK 532

Query: 401 LGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWG 457
           LG   + + S+P   + +        +   P +  AI+   V    S  +   G+ +T+G
Sbjct: 533 LGFDRILSASEPSSEDQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFG 592

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG        +P  V+ L        +CG   TV +   G+V+T G    G+LG
Sbjct: 593 SNQHGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAVGAEGQVFTWGKGARGRLG 652



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 140/332 (42%), Gaps = 38/332 (11%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKD---GRLGHKVNMDVSCPKLVECLSGI 314
           +V  +S G    A VTK G +  W     G G     G + H     +S  + +E  SG+
Sbjct: 340 EVVQVSAGRTQKAGVTKSGRLIMWEATPVGTGAPSLPGSIEHAQPQFIS--RFLEGQSGV 397

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            ++ VSCG+  T  LT  G I T+G  ++G   +G         P K+ + L G  +  V
Sbjct: 398 TIKHVSCGDLFTACLTDRGIIMTFGSGSNGC--LGHANFNDVTQP-KIVEDLLGYEIVHV 454

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           +CG  H   VS   ++F++G G  G LG G+ ++ + P++V      + + V CG     
Sbjct: 455 SCGASHAIAVSNEKEVFSWGRGDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCG----- 509

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--------------HVDGERKLLPTCVTR 480
                 +D      +  +L   G     +LG               V+      P     
Sbjct: 510 ------IDSSMILTVANQLLACGSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQSAP 563

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           L     + A  G   +  +T LG+ YT GS  HGQLG    ++  +  +   L+   V  
Sbjct: 564 LNQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSALQGVKVTM 623

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           ++ G  +   + + G V+TWGK A G+LG  D
Sbjct: 624 VACGDAYTVAVGAEGQVFTWGKGARGRLGRRD 655



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           +++ + VQ S GR    G+T  G++  M  A     G P     SI   + +    F++G
Sbjct: 336 MLNTEVVQVSAGRTQKAGVTKSGRL-IMWEATPVGTGAPSLPG-SIEHAQPQFISRFLEG 393

Query: 541 --------ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
                   +S G    A LT  G + T+G  +NG LG  +  +   P  VE L   ++  
Sbjct: 394 QSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHANFNDVTQPKIVEDLLGYEIVH 453

Query: 593 VVCGSSITAAICLHKSI 609
           V CG+S   A+   K +
Sbjct: 454 VSCGASHAIAVSNEKEV 470


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 18/273 (6%)

Query: 257 ESAVMLDVQNI---SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLS 312
           E  V LD QNI   S G  H   +  +G+V+ WG   DG+LG     + +  P+ ++ LS
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLS 84

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            I +  VSCG + + AL+K  E+++WG N +G   +G    +      +L  +L G+   
Sbjct: 85  DIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQ--TSPQLIKSLLGIPFM 142

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           ++A G  H+ +++ SG +F +G   FG LG  +  +   P  ++SLR  K+  + CG  H
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           TAA+              G +FT+G    G+LGH     ++ P  V  L+     Q +CG
Sbjct: 203 TAALTK-----------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACG 251

Query: 493 RMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDR 524
           R  T       G++Y+ G   +GQLG     +R
Sbjct: 252 RQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 284



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 17/316 (5%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGERRSRSHWLPRKLFDTL 366
           V  L   N+ +VSCG+  T AL   G++Y WG +  G   L G        +PR +  +L
Sbjct: 27  VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIR--VPRNI-KSL 83

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKS 425
             +++ +V+CG +H+  +S   ++F++G   +G LG G   +  + P+ ++SL G+    
Sbjct: 84  SDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQ 143

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           +A G  H+  +            + G +F WG    G+LG  D   + +P  +  L    
Sbjct: 144 IAAGGAHSFVL-----------TLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 192

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
            V   CG   T  LT  G V+T G+  +GQLG+             +L    V  ++ G 
Sbjct: 193 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 252

Query: 546 YHV-AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            H  A + S G +Y++G   NGQLG G +  R++P  V+       E            C
Sbjct: 253 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQDPSNIDGEQYYC 312

Query: 605 LHKSISVGDQSSCSQC 620
           + +  S GDQS    C
Sbjct: 313 VKRIFSGGDQSFSHYC 328



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+ ++S   + +  +S G  H+  ++K  EVF WG+ K G+
Sbjct: 58  GLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQ 117

Query: 294 LGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG        + P+L++ L GI    ++ G   +  LT SG I+ WG N  G   +G   
Sbjct: 118 LGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ--LGLND 175

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
               ++P  L  +L   ++  + CGE HTA ++  G +FT+G G +G LGH +  +   P
Sbjct: 176 ENDRYVP-NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 234

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           ++V  L G  V  VACG  HT+A V             G+++++G    G+LG
Sbjct: 235 RKVFELMGSIVTQVACGRQHTSAFV----------PSSGRIYSFGLGGNGQLG 277



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L++S + +    I+ G  H+ ++T  G +F WG  K G+LG     D   P L++ L 
Sbjct: 130 PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR 189

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +  + CGE  T ALTK G ++T+G   +G   +G   +     PRK+F+ + G  V+
Sbjct: 190 SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ--LGHNSTSHEINPRKVFELM-GSIVT 246

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
           +VACG  HT A V +SG+++++G G  G LG G+  N   P  V+
Sbjct: 247 QVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 291



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 15/194 (7%)

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           ++V +L    + +V+CG  HT A+ D            G+++ WG    G+LG    E  
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALND-----------KGQVYAWGLDTDGQLGLPGTEEC 73

Query: 473 L-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVV 529
           + +P  +  L D   VQ SCG   ++ L+   +V++ G   +GQLG      K  S  ++
Sbjct: 74  IRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLI 133

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           +  L   F++ I++G  H  VLT  G+++ WG+N  GQLGL D  +R  P  +++LR ++
Sbjct: 134 KSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 192

Query: 590 VESVVCGSSITAAI 603
           +  + CG   TAA+
Sbjct: 193 IVYICCGEDHTAAL 206


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 14/213 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCG 322
           +  I+ G  H+  ++K GE+F WG+   G+LG       ++ P++VE LSGI +  +S G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + AL+ SG IY+WG N+ G   +G    +    P  L + LD  +V  +ACG  HTA
Sbjct: 318 KAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKD--FP-SLIEALDNQKVEFLACGGSHTA 374

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++  G +FT+G G  G LGH + QN  +P+ V  L G +V  +ACG  HT A V  +  
Sbjct: 375 LLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDL-- 432

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
                   GK+F++G   +G+LG+     +L+P
Sbjct: 433 --------GKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 17/213 (7%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACG 429
           + ++ CG++H+  +S  G+LF +G    G LG G+   +++ P+ VE+L G+ +  ++ G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFV 487
             H+ A+           ++ G +++WG  D G+LG  H DG  K  P+ +  L +    
Sbjct: 318 KAHSMAL-----------SMSGNIYSWGRNDFGQLGLGHTDG--KDFPSLIEALDNQKVE 364

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             +CG   T  LT  G V+T G+  HGQLG+   ++     +  +L    V  I+ G  H
Sbjct: 365 FLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQH 424

Query: 548 -VAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
            +A ++  G V+++G    GQLG G +  +  P
Sbjct: 425 TLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 457



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 17/212 (8%)

Query: 220 DVMIWGEGVLGGDIG-GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WG+  L G +G G+   S++         +P+++E+   + +  IS G  H+  ++
Sbjct: 276 ELFAWGQN-LHGQLGIGSQFASIA---------IPQIVENLSGIPLVQISAGKAHSMALS 325

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G ++ WG    G+LG         P L+E L    V+ ++CG   T  LTK G ++T+
Sbjct: 326 MSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 385

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGT 397
           G   HG   +G   +++   PR L   L G RV+++ACG  HT A VS  G++F++G G 
Sbjct: 386 GAGKHGQ--LGHNSTQNELRPR-LVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGK 442

Query: 398 FGVLGHGNLQN--VSQPKEVESLRGLKVKSVA 427
            G LG+G   N  +  P ++ S   L  +S A
Sbjct: 443 EGQLGNGGTHNQLIPLPMKLPSNEELTFESRA 474



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 26/246 (10%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           ++  V  G  +  I+S+ G+ F Y       + H   Q + Q K         +  + CG
Sbjct: 217 KIHSVDQGAEYMLILSSDGKPFEYNYS----IEHARFQCILQEK--------XIIQITCG 264

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQ 488
            +H+ A+           + GG+LF WG    G+LG       + +P  V  L     VQ
Sbjct: 265 DYHSLAL-----------SKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQ 313

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            S G+  ++ L+  G +Y+ G    GQLG      +    +   L  + V+ ++ G  H 
Sbjct: 314 ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHT 373

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC--LH 606
           A+LT  G V+T+G   +GQLG   +Q    P  V  L   +V  + CG   T A    L 
Sbjct: 374 ALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLG 433

Query: 607 KSISVG 612
           K  S G
Sbjct: 434 KVFSFG 439


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4647

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 145/318 (45%), Gaps = 43/318 (13%)

Query: 282  EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            EV+ WG G+ G+L        S P L   LS    Q V CG+  T  +  +G +   G  
Sbjct: 3861 EVYLWGNGRHGQLA-DAGTSASVPTLAPSLS--QTQQVVCGQNCTFLVQANGTVLAVGEG 3917

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG---EWHTAIVSTSGQLFTYGDGTF 398
            ++G   +G+  S   + P  +   L G  V+++      + H+  ++ +G++F++GDG +
Sbjct: 3918 SYGR--LGQGNSDDLYTP-TIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDY 3974

Query: 399  GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G LGHGN +   +PK++E L+G +V  +ACG  H+A +              GKLFT+G 
Sbjct: 3975 GKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVT-----------ADGKLFTFGS 4023

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             D GRLG      K++P  VT L      Q   G                       L +
Sbjct: 4024 GDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIG-----------------------LPD 4060

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
               K+ +   +   L+  F++ I+ G  H+  L++ G VY WG N   QLGLG S   + 
Sbjct: 4061 AMLKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKE 4120

Query: 579  PTFVEALRDRQVESVVCG 596
            P  V  L+ + +  +  G
Sbjct: 4121 PILVTTLQGKNIRQISAG 4138



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 162/356 (45%), Gaps = 21/356 (5%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L PKL +     D Q I  G      V+ +G V   G+G  GRLG   + + S PK +  
Sbjct: 392 LQPKLAQG--FSDAQMIEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVL 449

Query: 311 LSGINVQSVSC---GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
                ++ VS     +  T A+T  GE+++WG  ++G   +G   S +   P+ +   L 
Sbjct: 450 EPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGK--LGHGNSATQKYPKIIQGPLL 507

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  V  V+ G  H+A V+  G+L+T+G+G FG LGH +  + + P  V+ + G  V  VA
Sbjct: 508 GKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISG--VGQVA 565

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HT A+             G  ++++G  D G+LGH D  R   P  +  L  F   
Sbjct: 566 CGSSHTIAVAQ----------DGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIR 615

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           +   G   ++ LT  G+V+  G       G+ +       ++E +L    +  IS G  H
Sbjct: 616 KVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRLIE-ELSITKIIDISCGDSH 674

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAA 602
              L+    V+ WG NA GQ G G +    T P  V  L    ++ +  G+S + A
Sbjct: 675 CLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLA 730



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 160/345 (46%), Gaps = 28/345 (8%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG     +L       +  PKL +  S  + Q +  G++ T +++  G +   G  +
Sbjct: 372 VYVWGSNSSHQLAEGTLEKILQPKLAQGFS--DAQMIEAGQYCTFSVSADGAVKACGKGS 429

Query: 343 HGADLVGERRSRSHWLPRKLF----DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           +G   +G+  ++S  +P+KL      T+  V  SK + G  HT  V+  G++F++GDG +
Sbjct: 430 YGRLGLGDSNNQS--MPKKLVLEPPRTMRKVSSSKGSDG--HTLAVTAEGEVFSWGDGDY 485

Query: 399 GVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LGHGN      PK ++  L G  V  V+ G  H+AA+ +            G+L+TWG
Sbjct: 486 GKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTN-----------DGELYTWG 534

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-VYTMGSAVHGQL 516
           + D GRLGH D   + +PT V  +      Q +CG   T+ +   G+ V++ G   +G+L
Sbjct: 535 EGDFGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSHTIAVAQDGRIVWSFGGGDNGKL 592

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           G+          V   L    ++ + +GS     LTS G V+ WG      LG G S+  
Sbjct: 593 GHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG--CGSCLGCGSSETT 650

Query: 577 ET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
              P  +E L   ++  + CG S   A+     +     ++  QC
Sbjct: 651 SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQC 695



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 147/328 (44%), Gaps = 31/328 (9%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTK 331
           H   VT EGEVF WG+G  G+LGH  +     PK+++  L G  V  VS G   + A+T 
Sbjct: 467 HTLAVTAEGEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTN 526

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL- 390
            GE+YTWG  + G   +G   S S  +P  L   + G  V +VACG  HT  V+  G++ 
Sbjct: 527 DGELYTWGEGDFGR--LGHSDSHSRNVP-TLVKDISG--VGQVACGSSHTIAVAQDGRIV 581

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +++G G  G LGHG+   V +PK +E+L G  ++ V  G   + A+              
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTS-----------A 630

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G++F WG       G  +    L P  +  L     +  SCG    + L+   +V+  G+
Sbjct: 631 GQVFAWGCGSCLGCGSSE-TTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGN 689

Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              GQ G      P  K + +  +EG   ++   G S      AV T    +  W +   
Sbjct: 690 NAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTD-RQLVAWHRPFC 748

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESV 593
             L      E  T T++ +  +R  +S+
Sbjct: 749 VDL------EESTFTYLRSFLERYCDSI 770



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 31/250 (12%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ +  K       PK+++  ++  V   +S G +H+A VT
Sbjct: 476 EVFSWGDG----DYGKLGHGNSATQK------YPKIIQGPLLGKVVVCVSAGYRHSAAVT 525

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI-YT 337
            +GE++ WGEG  GRLGH  +   + P LV+ +SG+    V+CG   T A+ + G I ++
Sbjct: 526 NDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG--QVACGSSHTIAVAQDGRIVWS 583

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G  + KV  G   +  ++++GQ+F +G G+
Sbjct: 584 FGGGDNGK--LGHGDTNRVYRP-KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGS 640

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  S +P+ +E L   K+  ++CG  H           C + +   ++F W
Sbjct: 641 --CLGCGSSETTSLRPRLIEELSITKIIDISCGDSH-----------CLALSHENEVFAW 687

Query: 457 GDADKGRLGH 466
           G+   G+ G 
Sbjct: 688 GNNAMGQCGQ 697



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 158/378 (41%), Gaps = 71/378 (18%)

Query: 220  DVMIWGEGVLG--GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
            +V +WG G  G   D G             V  L P L ++      Q +  G     LV
Sbjct: 3861 EVYLWGNGRHGQLADAG---------TSASVPTLAPSLSQT------QQVVCGQNCTFLV 3905

Query: 278  TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC---GEFQTCALTKSGE 334
               G V   GEG  GRLG   + D+  P ++  L G  V  +      +  + ALT++GE
Sbjct: 3906 QANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGE 3965

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +++WG  ++G   +G   S     P+++ + L G  V ++ACG  H+A+V+  G+LFT+G
Sbjct: 3966 VFSWGDGDYGK--LGHGNSERQRRPKQI-EGLQGEEVVQLACGFKHSAVVTADGKLFTFG 4022

Query: 395  DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
             G  G LG  +  N   P+ V +L G                          + IG +L 
Sbjct: 4023 SGDSGRLGQRSTSNKMIPERVTALDG--------------------------HHIGQRLI 4056

Query: 455  TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
               DA    +       +++P      V  + +   C  +L   L+  G VY  G     
Sbjct: 4057 GLPDA----MLKNHNRPQIIPAL--EGVFIEDIAVGCEHIL--ALSNTGDVYAWGCNCEA 4108

Query: 515  QLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG-QLG 569
            QLG    NP  +   +T ++GK     ++ IS+G  H +  T+  ++ T     +G QLG
Sbjct: 4109 QLGLGHSNPVKEPILVTTLQGK----NIRQISAGRCHSSAWTT-PALSTRASGCSGIQLG 4163

Query: 570  LGDSQERETPTFVEALRD 587
            L  S     P    AL+D
Sbjct: 4164 LPQS----VPPQYNALKD 4177



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 10/160 (6%)

Query: 450  GGK--LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
            GGK  ++ WG+   G+L    G    +PT    L      Q  CG+  T  +   G V  
Sbjct: 3857 GGKSEVYLWGNGRHGQLADA-GTSASVPTLAPSLSQTQ--QVVCGQNCTFLVQANGTVLA 3913

Query: 508  MGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +G   +G+LG   + D      I+ ++G +  + V    S  + +A LT  G V++WG  
Sbjct: 3914 VGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLA-LTETGEVFSWGDG 3972

Query: 564  ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              G+LG G+S+ +  P  +E L+  +V  + CG   +A +
Sbjct: 3973 DYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVV 4012


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 173/375 (46%), Gaps = 27/375 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           ++ IS G +H  ++ ++G V   G    G+LG  +   +++     E L    +  VSCG
Sbjct: 40  IREISCGLRHTCVLLRDGTVMMCGANDRGQLGQDRPGSELAHVPATETLV---ITQVSCG 96

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T A+T  G++  WG N+ G   +    S     PR L  +L   +V++VACG  H+ 
Sbjct: 97  NDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFL-KSLSSCQVAQVACGSMHSM 155

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNV---SQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            ++  G++F +GD +FG LG G          P+++ SL G+ ++ +ACG WH+ A+   
Sbjct: 156 ALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL--- 212

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                   ++ G +F WG  + G+LG    E ++ PT +  L        +CG+  T  L
Sbjct: 213 --------SVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAIL 264

Query: 500 TGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS-GGSV 557
           T  G ++  G    GQLG+   + + +   V+G L  E  + ++ G  H  VL    G  
Sbjct: 265 TASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQ-VACGRQHTLVLEGRTGRF 323

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
           ++ G+ + GQLGL +   +   + V    +    +  C +   +   +    + GDQS C
Sbjct: 324 FSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFC 383

Query: 618 SQCR-----MPFGFR 627
              R      P  FR
Sbjct: 384 IVSRGNDPDHPLDFR 398



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 20/262 (7%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV--NMDVSCPKLVECLSGINVQSV 319
           L +  +S G  H   VT  G+V  WG    G+ G     + D   P+ ++ LS   V  V
Sbjct: 88  LVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQV 147

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVG---ERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           +CG   + ALT+ G I+ WG N+ G   +G       R H  P++L  +L GV + ++AC
Sbjct: 148 ACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDH--PQQL-SSLPGVPIRRLAC 204

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G WH+  +S SG +F +G    G LG G  ++   P  +++L+  +VK +ACG  +TA +
Sbjct: 205 GGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAIL 264

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                         G LF +G   +G+LGH     ++ P  V   +  +  Q +CGR  T
Sbjct: 265 -----------TASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHT 313

Query: 497 VGLTG-LGKVYTMGSAVHGQLG 517
           + L G  G+ +++G    GQLG
Sbjct: 314 LVLEGRTGRFFSLGQGSKGQLG 335



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 25/330 (7%)

Query: 283 VFCWGEGKDGRLGHKVNMD----VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           VF WG  +DG+LG     D    +S P+ V  L+G  ++ +SCG   TC L + G +   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G N+ G   +G+ R  S        +TL    +++V+CG  HT  V+  GQ+  +G    
Sbjct: 63  GANDRGQ--LGQDRPGSELAHVPATETL---VITQVSCGNDHTLAVTDRGQVLGWGRNDR 117

Query: 399 GVLG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
           G  G   G+ ++  +P+ ++SL   +V  VACG  H+ A+              G++F W
Sbjct: 118 GQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTR-----------DGRIFAW 166

Query: 457 GDADKGRLGHVDGERKLL---PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           GD   G+LG     R L    P  ++ L      + +CG   +  L+  G V+  G    
Sbjct: 167 GDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNC 226

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG    +DR        LK + VK I+ G  + A+LT+ G ++ +G+ + GQLG G  
Sbjct: 227 GQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSH 286

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
                P  V+     ++  V CG   T  +
Sbjct: 287 SNEVNPRSVQGFLGSEITQVACGRQHTLVL 316



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 16/216 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV---NMDVSCPKLVE 309
           P+ L+S     V  ++ G+ H+  +T++G +F WG+   G+LG       +    P+ + 
Sbjct: 133 PRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLS 192

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            L G+ ++ ++CG + + AL+ SG ++ WG NN G   +G    R    P K    L   
Sbjct: 193 SLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLK---NLKTK 249

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  +ACG+ +TAI++ SG LF +G G+ G LGHG+  N   P+ V+   G ++  VACG
Sbjct: 250 QVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACG 309

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
             HT  +              G+ F+ G   KG+LG
Sbjct: 310 RQHTLVL----------EGRTGRFFSLGQGSKGQLG 335



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 21/267 (7%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           PR++   L G ++ +++CG  HT ++   G +   G    G LG    +  S+   V + 
Sbjct: 29  PREV-PALAGKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLGQD--RPGSELAHVPAT 85

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV--DGERKLLPT 476
             L +  V+CG  HT A+ D            G++  WG  D+G+ G    D E K  P 
Sbjct: 86  ETLVITQVSCGNDHTLAVTD-----------RGQVLGWGRNDRGQCGLSTGDSEDKRKPR 134

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK---- 532
            +  L      Q +CG M ++ LT  G+++  G    GQLG   A  R++     +    
Sbjct: 135 FLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGI-GAPGRTLYRDHPQQLSS 193

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L    ++ ++ G +H   L+  G+V+ WGKN  GQLGLG +++R +PT ++ L+ +QV+ 
Sbjct: 194 LPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKY 253

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQ 619
           + CG + TA +     + +  Q S  Q
Sbjct: 254 IACGQNYTAILTASGGLFLFGQGSEGQ 280



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 141/337 (41%), Gaps = 65/337 (19%)

Query: 233 IGGAVDGSVSQNKTQV------DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           + GAV G    N  Q+      D + P  L++     V+ I+ G  + A++T  G +F +
Sbjct: 214 VSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLF 273

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHGA 345
           G+G +G+LGH  + +   P+ V+   G  +  V+CG   T  L  ++G  ++ G  + G 
Sbjct: 274 GQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQ 333

Query: 346 DLVGERRSRSHWLPRKLFDTLDG---VRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGV 400
             +    S+S   P      + G      S   C  GE   +I+   G +F  GD +F +
Sbjct: 334 LGLDNDSSKSCASP------VPGPWEAPSSTEGCSNGEESRSII---GSIFAGGDQSFCI 384

Query: 401 LGHGN------------------------LQNVSQ-------PKEVESLRGLKVKSVACG 429
           +  GN                        LQ VS+        K V++L  + + S AC 
Sbjct: 385 VSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLE-MALSSPAC- 442

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             + + +V          A  G LF +G   +G+LGH     ++ P  V   +  +  Q 
Sbjct: 443 -LNASFLV---------GAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQV 492

Query: 490 SCGRMLTVGLTG-LGKVYTMGSAVHGQLGNPKAKDRS 525
           +CGR  T+ L G  G  Y++G    GQLG      +S
Sbjct: 493 ACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKS 529



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 13/134 (9%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT-KSGEIYTWG 339
           G +F +G+G +G+LGH  + +   P+ V+   G  +  V+CG   T  L  ++G  Y+ G
Sbjct: 454 GGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSLG 513

Query: 340 HNNHGADLV--GERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGD 395
             + G   +  G  +S +  +P            S   C  GE   +I+   G +F  GD
Sbjct: 514 QGSKGQLGLDNGSSKSCASLVPGPW-----EAPSSTEGCSNGEESRSII---GSIFAGGD 565

Query: 396 GTFGVLGHGNLQNV 409
            +F ++  GN+  +
Sbjct: 566 QSFCIVSRGNISGI 579


>gi|443710462|gb|ELU04715.1| hypothetical protein CAPTEDRAFT_111937 [Capitella teleta]
          Length = 689

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 154/341 (45%), Gaps = 47/341 (13%)

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG-INVQSVSCGEFQTCALTKSGEIYTW 338
           +  V+CWG G            +S P L+   S   ++  VS G  Q  A+TK+G +  W
Sbjct: 320 QSRVYCWGGG------------ISAPHLLPLPSSDTHITEVSTGRTQKAAVTKNGRLLLW 367

Query: 339 GHNNHGAD--LVGERRSRS-HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
              + GA+  + G   +    ++PR L +    V +  V+CG+  TA ++  G L T+G 
Sbjct: 368 ETPSVGAEPSMPGATGAGGPAFIPRYL-EGQSAVTIKHVSCGDLFTACLTDRGILMTFGS 426

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G  G LGHGN  +VSQ K VE L G +V  V+CG  H  A+ +              +F+
Sbjct: 427 GANGCLGHGNYNDVSQAKIVEDLLGFEVSQVSCGASHVMAVTN-----------EHDVFS 475

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG---RMLTVGLTGLGKVYTMGSAV 512
           WG  D GRLG    E    P  V  + +   + A CG    ML V    +  ++  GS  
Sbjct: 476 WGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCSMLLV--EPMSTLFCCGSNR 533

Query: 513 HGQLGNPKAKDRSITVVEG----------KLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           + +L    A DR    VE            L  + +  ++ G+ H A + S G  YT+G 
Sbjct: 534 YNKL----ALDRESEHVEEVHSFCPVQSLPLASQAIAMVAMGTSHAAAIMSNGECYTFGS 589

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N  GQLG+  + +   PT V +L    V  V CG + T AI
Sbjct: 590 NQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGDTFTVAI 630



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 67/277 (24%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
           A +P+ LE    + ++++S G    A +T  G +  +G G +G LGH    DVS  K+VE
Sbjct: 388 AFIPRYLEGQSAVTIKHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVE 447

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS-----RSHWLPR-KLF 363
            L G  V  VSCG     A+T   ++++WG  ++G   +G + S     R   +P  +  
Sbjct: 448 DLLGFEVSQVSCGASHVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPI 507

Query: 364 DTLDGVRVSKV---------ACG-----------------EWHT---------------- 381
             L GV  S +          CG                 E H+                
Sbjct: 508 SALCGVDCSMLLVEPMSTLFCCGSNRYNKLALDRESEHVEEVHSFCPVQSLPLASQAIAM 567

Query: 382 --------AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
                   A + ++G+ +T+G   FG LG     + + P  V SL  + V  V+CG   T
Sbjct: 568 VAMGTSHAAAIMSNGECYTFGSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGDTFT 627

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            AI+             GK+++WG A +GRLG +D E
Sbjct: 628 VAIMK-----------DGKIYSWGKAARGRLGRLDCE 653


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 154/300 (51%), Gaps = 22/300 (7%)

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINV 316
           E+A   +++  + G +H+ L+  +G V   G+   G+LG +       P L++ L  +NV
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNV 75

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
             +SCG+  + A+   G ++ WG  + G   +GE +   ++ P K+   L G+++ +V+C
Sbjct: 76  DLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEL-NFTPMKV-KALAGIKIIQVSC 133

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTA 434
           G +H+  +S  GQ+F++G+ + G LG G  + +SQ  P+ V+SL G+ +  VA G  H+ 
Sbjct: 134 GHYHSLALSQDGQVFSWGNNSHGQLGLGK-EFLSQESPQRVKSLEGIPLAQVAAGGAHSF 192

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASC 491
           A+           ++ G  F WG  + G+L   G+    +   P  +  L +   V  SC
Sbjct: 193 AL-----------SLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISC 241

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
           G   T  LT  GKV+T G    GQLG+ P A+ R   +VEG   +  V  I  GSYH  V
Sbjct: 242 GSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLV 299



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 154/328 (46%), Gaps = 44/328 (13%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCW  G  GR               E   G  ++  + GE  +  L   G ++  G N+ 
Sbjct: 3   FCWDAGSRGRQSR------------EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSC 50

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G RR   H     L   L+ + V  ++CG+ H+  V   G++F +G G+ G LG 
Sbjct: 51  GQ--LG-RRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 107

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + ++  P +V++L G+K+  V+CG +H+ A+           +  G++F+WG+   G
Sbjct: 108 GEFKELNFTPMKVKALAGIKIIQVSCGHYHSLAL-----------SQDGQVFSWGNNSHG 156

Query: 463 RLGHVDGERKLL---PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL--- 516
           +LG   G+  L    P  V  L      Q + G   +  L+  G  +  GS   GQL   
Sbjct: 157 QLGL--GKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALS 214

Query: 517 GN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           GN       K RSI    G LKE  V  IS GS H AVLT  G V+T+G N++GQLG G 
Sbjct: 215 GNNVPVQSYKPRSI----GALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGP 270

Query: 573 SQERETPTFVEALRDRQVESVVCGSSIT 600
           + E+  P  VE + D  V  + CGS  T
Sbjct: 271 TAEKRGPQLVEGI-DGLVSQIDCGSYHT 297



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 18/249 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECL 311
           P L+++   L+V  +S G +H+  V  +G VF WG G +G+LG     +++  P  V+ L
Sbjct: 64  PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  VSCG + + AL++ G++++WG+N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 124 AGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLG-KEFLSQESPQRV-KSLEGIPL 181

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G    G L   GN   V   +P+ + +L+ L V  ++C
Sbjct: 182 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISC 241

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LGH     K  P  V   +D    Q
Sbjct: 242 GSEHTAVLTQ-----------DGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG-IDGLVSQ 289

Query: 489 ASCGRMLTV 497
             CG   T+
Sbjct: 290 IDCGSYHTL 298



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +     P  +++   + +  +S G  H+  ++++G+VF WG    G+
Sbjct: 98  GAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQ 157

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K  +    P+ V+ L GI +  V+ G   + AL+ SG  + WG NN G   L G  
Sbjct: 158 LGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNN 217

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + PR +   L  + V  ++CG  HTA+++  G++FT+GD + G LGHG       
Sbjct: 218 VPVQSYKPRSI-GALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRG 276

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG +HT   V
Sbjct: 277 PQLVEGIDGL-VSQIDCGSYHTLVYV 301



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L S G+V+  G N+ GQLG      R+ P  ++AL    V+ + CG   + 
Sbjct: 27  ASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSL 86

Query: 602 AICLHK 607
           A+C HK
Sbjct: 87  AVC-HK 91


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 167/346 (48%), Gaps = 44/346 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      ++ P  V+ L    V+ V+CG   T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G +Y  G NN G   +G+   R+ + P   F +    ++ +++ G   +A ++ 
Sbjct: 100 LVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTSQH--KIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           +G+LF +GD + G +G  N+ NV  P +V    G  +  ++CG +H+A +          
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVCVPHQV--TIGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
             + G+L+T+G+ + G+LG  +   +LL     P  VTR+ +   +Q +CG   TV LT 
Sbjct: 207 --MDGELYTFGECENGKLGLPE---ELLINHKTPQLVTRIPE-KVIQVACGGGHTVVLTE 260

Query: 502 LGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              VYT G    GQLG          PKA +         +K+  +  IS G  H A++T
Sbjct: 261 T-IVYTFGLGQFGQLGLGTFIFETSEPKAIEY--------IKDHKISSISCGENHTALIT 311

Query: 553 SGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
             G +YT+G    G+LGLG  +   +  PT         ++ V CG
Sbjct: 312 ELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACG 357



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 19/232 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T+ GE+F WG+  +G++G K   +V  P  V    G  +  +SCG 
Sbjct: 142 IKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTI--GKPISWISCGY 199

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + +  +T  GE+YT+G   +G   + E    +H  P+ +  T    +V +VACG  HT +
Sbjct: 200 YHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLV--TRIPEKVIQVACGGGHT-V 256

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           V T   ++T+G G FG LG G  +   S+PK +E ++  K+ S++CG  HTA I ++   
Sbjct: 257 VLTETIVYTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITEL--- 313

Query: 443 RCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                   G+++T+GD   G+  LG  +   + +PT     + F     +CG
Sbjct: 314 --------GRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACG 357



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 22/258 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCG 322
           V+ ++ G  H  + T+EG V+  G   DG+LG       +    +   +  + ++ +S G
Sbjct: 89  VKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISFFTSQHKIKQLSAG 148

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              + ALT++GE++ WG N+ G   +G +   +  +P ++  T+ G  +S ++CG +H+A
Sbjct: 149 SNTSAALTENGELFMWGDNSEGQ--IGLKNVTNVCVPHQV--TI-GKPISWISCGYYHSA 203

Query: 383 IVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            V+  G+L+T+G+   G LG     L N   P+ V  +   KV  VACG  HT  + + +
Sbjct: 204 FVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRIPE-KVIQVACGGGHTVVLTETI 262

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
           V            +T+G    G+LG          P  +  + D      SCG   T  +
Sbjct: 263 V------------YTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALI 310

Query: 500 TGLGKVYTMGSAVHGQLG 517
           T LG++YT G   +G+LG
Sbjct: 311 TELGRMYTFGDGRYGKLG 328



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           +S G  H AV+T    +Y +G N  GQLGLG       PT V+AL+  +V+ V CG + T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 168/355 (47%), Gaps = 27/355 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+  +G V   G+   G+LG K       P+ +  L  ++V  VSCG+  + A+
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  + ++P+K+  TL  +++ +VACG +H+  +S  GQ
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETT-FIPKKI-KTLADIKIIQVACGHYHSLALSEDGQ 120

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 121 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 169

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG  + G+L   G+    ++  P  V  L     V  SCG   T  LT  GKV
Sbjct: 170 LSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKV 229

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG-- 561
           +T G   +GQLG +  A+ R   +VE    E  V  I  GSYH +A + + G V ++G  
Sbjct: 230 FTFGDNSYGQLGHDSTAEKRGPQLVER--IEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 287

Query: 562 ----KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
               +++     L +S +         L D QV+ +  G+          + S G
Sbjct: 288 PGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGTYANFVTTYQDTSSTG 342



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 152/316 (48%), Gaps = 35/316 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P+ + +   L V  +S G +H+  V  +G VF WG   +G+LG  ++      PK ++ L
Sbjct: 38  PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTL 97

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           + I +  V+CG + + AL++ G++++WG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 98  ADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 155

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGNLQNVS--QPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G    G L   GN   V   +P  V +L+ L V  ++C
Sbjct: 156 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISC 215

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              GK+FT+GD   G+LGH     K  P  V R+      Q
Sbjct: 216 GYEHTAVLTQ-----------DGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGL-VSQ 263

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKA----KDRSITVVEGKLKEE 536
             CG   T     L  VYT G  V    G        +P+A     D S  +    L++ 
Sbjct: 264 IDCGSYHT-----LAYVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISANDLEDV 318

Query: 537 FVKGISSGSYHVAVLT 552
            VK I +G+Y   V T
Sbjct: 319 QVKHIFAGTYANFVTT 334



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G A +G +   + +    +PK +++   + +  ++ G  H+  ++++G+VF WG+   G+
Sbjct: 72  GAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQ 131

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG NN G   L G  
Sbjct: 132 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNN 191

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  L   L  + V  ++CG  HTA+++  G++FT+GD ++G LGH +      
Sbjct: 192 APVQRYKP-VLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRG 250

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG +HT A V
Sbjct: 251 PQLVERIEGL-VSQIDCGSYHTLAYV 275



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S N   V    P L+ +   L V  IS G +H A++T++G+VF +G+   G+LGH   
Sbjct: 186 ALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDST 245

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
            +   P+LVE + G+ V  + CG + T A +  +G++ ++G
Sbjct: 246 AEKRGPQLVERIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           SG +H  +L S G+V + G N+ GQLG   +   E P  + AL    V  V CG   + A
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61

Query: 603 ICLHK 607
           +C HK
Sbjct: 62  VC-HK 65


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 178/373 (47%), Gaps = 39/373 (10%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKL 307
           D   P+LL    +  + +++ G  H   +T  G+V  WG G  G+LGH + +  S  PK 
Sbjct: 38  DEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKA 97

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           V  L G  +  VS G   +  ++ +G ++T G  + G   +G     SH  P K+   +D
Sbjct: 98  VTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQ--LGHGDHASHCSPVKVSCFVD 155

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKS 425
              V +VACG  H+ ++    Q++ +G G  G LG  N  +++V+ PK V    G+++  
Sbjct: 156 -QHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAG 214

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           +A    H+AA+           ++ G ++TWG   KG       E   +P C+      +
Sbjct: 215 IAANGDHSAAV-----------SVDGHVYTWGRGFKGF------EDARVPQCLNS--SLN 255

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----------PKAKDRSITVVEGKLKE 535
           F + + G    + ++G G+V  +G    G L +          P  ++ ++  V G L  
Sbjct: 256 FTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPG-LDG 314

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD-RQVESVV 594
             +  I++G+ H  ++T  G + TWG   +GQLGLGD+++R +P  V    D  +  SV+
Sbjct: 315 TKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAASVI 374

Query: 595 --CGSSITAAICL 605
             CGS  T A+ +
Sbjct: 375 VFCGSGFTFAVTM 387



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 129/338 (38%), Gaps = 81/338 (23%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG G           G +       ++L PK + S     + ++S G  H+  V+  
Sbjct: 72  VLSWGRGN---------SGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDN 122

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G VF  G+G  G+LGH  +     P  V C    +V+ V+CG   +  L K  ++Y +G 
Sbjct: 123 GCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGS 182

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG---- 396
              G   V   R +S  +P K+    +GV ++ +A    H+A VS  G ++T+G G    
Sbjct: 183 GKRGQLGVSNDRVKSVNVP-KVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGFKGF 241

Query: 397 ----------------------------------------TFGVLGHGNLQNVSQPKEVE 416
                                                     GVL   +LQN+S  K + 
Sbjct: 242 EDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVL--SDLQNISPAKHLP 299

Query: 417 SLR-----------GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            LR           G K+  +A G  H+  + +            G++ TWG  + G+LG
Sbjct: 300 HLREVNLEKVPGLDGTKITDIATGAEHSVIVTEH-----------GEIKTWGWGEHGQLG 348

Query: 466 HVDGERKLLPTCVTRLVDFD---FVQASCGRMLTVGLT 500
             D   ++ P  V+   D +    V   CG   T  +T
Sbjct: 349 LGDTRDRISPVTVSLGYDLNEAASVIVFCGSGFTFAVT 386


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 173/420 (41%), Gaps = 62/420 (14%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG G  G  + G   GSV+     V  + P     +  + +     G++H+  + KE
Sbjct: 1148 VYSWGMGAYG--VLGT--GSVANRYNPVKVVFP-----SDNIFISKCCAGSRHSMALDKE 1198

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G V+ WG G +GRLG     +   P L+       V  +SCG+  +  L + G +YTWG 
Sbjct: 1199 GNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGC 1258

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG-DGTFG 399
               G   +G  +  S  L   + ++L G  + ++ACG  +T  +S SG+++ +G    F 
Sbjct: 1259 CRGGK--LGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGCTLGFN 1316

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
                G + N+    +     G K   +A GP+  AAI            I G L TWG  
Sbjct: 1317 KQSEGLISNIDYVPQPVPDTGFKNVFIAAGPYSCAAI-----------NIFGDLLTWGLG 1365

Query: 460  DKGRLGHVDGERKLLPTCVTRLVDFDFV-------------------------------- 487
               RLGH D +  + P  V+ L    ++                                
Sbjct: 1366 TGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQ 1425

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF---VKGISSG 544
            Q + G    V LT  G VYT G  V+   G    KD+  +  E  L   F   +  I+ G
Sbjct: 1426 QIAVGDGHGVLLTCNGTVYTWG--VNNGTGYNSTKDQIESYSEPMLFNHFSSKISKIACG 1483

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            S H   +T  G ++TWG N NGQLG GD + R  P  V  + +    +V  G   +  IC
Sbjct: 1484 SNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIEN--CINVFAGVDNSGCIC 1541



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 172/406 (42%), Gaps = 66/406 (16%)

Query: 220  DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT- 278
            +V  WG+ V    +G  VD S S+         PK++       +  ++ G  H+A++  
Sbjct: 1014 NVYSWGK-VPFNCLGQGVDVSTSE--------YPKIIPFFSGRKIAQVACGDYHSAVLVS 1064

Query: 279  ------KEGEVFCWGEGKDGRLGHKV--NMDV-----------------SCPKLVECLSG 313
                    G VF +G G  GRLG+ +  N DV                   P+ V    G
Sbjct: 1065 SSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIG 1124

Query: 314  IN--VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            +   + S++CG   T   T  G +Y+WG   +G  ++G     + + P K+    D + +
Sbjct: 1125 LRNAIVSIACGANHTLVTTVDGCVYSWGMGAYG--VLGTGSVANRYNPVKVVFPSDNIFI 1182

Query: 372  SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            SK   G  H+  +   G ++++G G  G LG G+ +N   P  +      +V  ++CG  
Sbjct: 1183 SKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDS 1242

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
            H+A +     DR       G ++TWG    G+LG       +L P  V  L     +Q +
Sbjct: 1243 HSACL-----DRF------GTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIA 1291

Query: 491  CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--------VVEGKLKEEFVKGIS 542
            CG   T+ L+  GK+Y  G      LG  K  +  I+        V +   K  F   I+
Sbjct: 1292 CGTGNTLALSASGKIYQWGCT----LGFNKQSEGLISNIDYVPQPVPDTGFKNVF---IA 1344

Query: 543  SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            +G Y  A +   G + TWG     +LG GDS++   P FV  LR R
Sbjct: 1345 AGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTR 1390



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 141/322 (43%), Gaps = 46/322 (14%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCA 328
            GAKH         V+ WG+     LG  V++  S  PK++   SG  +  V+CG++ +  
Sbjct: 1005 GAKHTV---SHLNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAV 1061

Query: 329  LTKS-------GEIYTWGHNNHG---------ADLVG-----ERRSRSHW---LPRKLFD 364
            L  S       G ++T+G  N G         +D++      E +    W    P+ +  
Sbjct: 1062 LVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGL 1121

Query: 365  TLDGVR--VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP-KEVESLRGL 421
            ++ G+R  +  +ACG  HT + +  G ++++G G +GVLG G++ N   P K V     +
Sbjct: 1122 SI-GLRNAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNI 1180

Query: 422  KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
             +     G  H+ A+     D+       G +++WG    GRLG         P  +   
Sbjct: 1181 FISKCCAGSRHSMAL-----DK------EGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIF 1229

Query: 482  VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI--TVVEGKLKEEFVK 539
              ++  Q SCG   +  L   G VYT G    G+LG  K     +   VVE  LK   + 
Sbjct: 1230 DTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVES-LKGTHII 1288

Query: 540  GISSGSYHVAVLTSGGSVYTWG 561
             I+ G+ +   L++ G +Y WG
Sbjct: 1289 QIACGTGNTLALSASGKIYQWG 1310



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 29/259 (11%)

Query: 390  LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++++G   F  LG G ++     PK +    G K+  VACG +H+A    ++V   K + 
Sbjct: 1015 VYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSA----VLVSSSKQHP 1070

Query: 449  IGGKLFTWGDADKGRLG-HVDGERKLL--------------------PTCVTRLVDFDFV 487
              G +FT+G  + GRLG H+D    +L                    P  ++  +    V
Sbjct: 1071 NAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIV 1130

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSY 546
              +CG   T+  T  G VY+ G   +G LG     +R   V V       F+    +GS 
Sbjct: 1131 SIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSR 1190

Query: 547  HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH 606
            H   L   G+V++WG   NG+LGLG ++   TP  +      +V  + CG S +A  CL 
Sbjct: 1191 HSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSA--CLD 1248

Query: 607  KSISVGDQSSCSQCRMPFG 625
            +  +V     C   ++  G
Sbjct: 1249 RFGTVYTWGCCRGGKLGLG 1267



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 146/362 (40%), Gaps = 64/362 (17%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--------------- 311
            I+ G    A +   G++  WG G   RLGH  + D   PK V  L               
Sbjct: 1343 IAAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDE 1402

Query: 312  ----------SGIN-------VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
                      +G         +Q ++ G+     LT +G +YTWG NN G      +   
Sbjct: 1403 TPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNN-GTGYNSTKDQI 1461

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
              +    LF+     ++SK+ACG  H+  ++ +G LFT+G    G LG G+L++   P  
Sbjct: 1462 ESYSEPMLFNHFSS-KISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDH 1520

Query: 415  VESLR-------GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
            V  +        G+      C   H     D M D        G L+ +G +  G+LG  
Sbjct: 1521 VPYIENCINVFAGVDNSGCICSSNHE----DFMKDDY------GTLWVFGSSSCGKLGLG 1570

Query: 468  DG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
            +      + P  +T +      + + G M +V LT  G +Y+ G+   G+LG     D S
Sbjct: 1571 EALTSTVMTPREITTVT--GVYKLALGTMHSVVLTHEGSLYSAGAGTGGRLG---TGDTS 1625

Query: 526  ITVVEGKLKEE--FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
               V   +K E  FV  + +GS H   ++    +Y WG+   G+    D +    PT +E
Sbjct: 1626 NYFVFTPVKTEVKFVD-VCAGSSHSLAISVDNELYGWGE---GKYICSDEKHVLEPTLME 1681

Query: 584  AL 585
             +
Sbjct: 1682 VI 1683



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 168/412 (40%), Gaps = 72/412 (17%)

Query: 216  DILKDVMIWGEGV---LG-GDIGGAVDGS-VSQNKTQV--DALLPKLLESAVMLD----- 263
            +I  D++ WG G    LG GD    V    VS  +T++  D LL    E+ + L      
Sbjct: 1354 NIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKA 1413

Query: 264  ----------VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD----VSCPKLVE 309
                      +Q I++G  H  L+T  G V+ WG   +   G+    D     S P L  
Sbjct: 1414 GATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWG--VNNGTGYNSTKDQIESYSEPMLFN 1471

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL------F 363
              S   +  ++CG   + A+T +G ++TWG N++G   +G+   RS  +P  +       
Sbjct: 1472 HFSS-KISKIACGSNHSLAITVNGLLFTWGCNDNGQ--LGQGDLRSRVIPDHVPYIENCI 1528

Query: 364  DTLDGVRVSKVACGEWHTAIVSTS-GQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRG 420
            +   GV  S   C   H   +    G L+ +G  + G LG G      V  P+E+ ++ G
Sbjct: 1529 NVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTG 1588

Query: 421  LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
              V  +A G  H+  +              G L++ G    GRLG  D     + T V  
Sbjct: 1589 --VYKLALGTMHSVVLTH-----------EGSLYSAGAGTGGRLGTGDTSNYFVFTPVK- 1634

Query: 481  LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE----- 535
              +  FV    G   ++ ++   ++Y  G       G     D    V+E  L E     
Sbjct: 1635 -TEVKFVDVCAGSSHSLAISVDNELYGWGE------GKYICSDEK-HVLEPTLMEVIPSP 1686

Query: 536  ----EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
                + +  +++G+ H  VLT+ G V  +G N  GQLG+  S +     F++
Sbjct: 1687 TGEAKVISAVAAGN-HSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIK 1737



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 157/351 (44%), Gaps = 41/351 (11%)

Query: 245  KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-----KVN 299
            K Q+++    +L +     +  I+ G+ H+  +T  G +F WG   +G+LG      +V 
Sbjct: 1458 KDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVI 1517

Query: 300  MDVSCPKLVECL---SGINVQSVSC-GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
             D   P +  C+   +G++     C    +       G ++ +G ++ G   +GE  + +
Sbjct: 1518 PD-HVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTST 1576

Query: 356  HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN--VSQPK 413
               PR++  T+ GV   K+A G  H+ +++  G L++ G GT G LG G+  N  V  P 
Sbjct: 1577 VMTPREI-TTVTGVY--KLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPV 1633

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            + E    +K   V  G  H+ AI           ++  +L+ WG+   G+    D +  L
Sbjct: 1634 KTE----VKFVDVCAGSSHSLAI-----------SVDNELYGWGE---GKYICSDEKHVL 1675

Query: 474  LPTCVTRLV----DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---NPKAKDRSI 526
             PT +  +     +   + A      ++ LT  G V   G+  +GQLG   + K+   + 
Sbjct: 1676 EPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNF 1735

Query: 527  TVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
              +   +  +  V  I++  Y  +  T  G  Y+WG +++ +LG+G +  +
Sbjct: 1736 IKMPSTVNLDANVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGVGFTNNK 1786


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 168/333 (50%), Gaps = 32/333 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           ++++  + G +H+ L+   G+V   G+   G+LG +     +  K +  L  ++V  VSC
Sbjct: 23  VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSC 82

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  + A+   G ++ WG  + G    GE +  ++ +P K+  TL+ +++ +V+CG +H+
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFK-ETNLIPMKI-KTLNDIKIKQVSCGHYHS 140

Query: 382 AIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
             +S  GQ+F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+    
Sbjct: 141 LALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL---- 196

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                  ++ G  F WG  + G+L     +V G+    P  ++ L +   +  SCG   T
Sbjct: 197 -------SLSGTSFGWGRNNAGQLALHKNNVSGQ-SYKPYSISALKNLGVIYISCGYEHT 248

Query: 497 VGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSG 554
           V LT  GKV+T G   +GQLG+ P A+     +VEG   +  V  I  GSYH +A + + 
Sbjct: 249 VVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYHTLAYVYTT 306

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           G V ++G+             + +PT  EAL +
Sbjct: 307 GKVVSFGREPTC---------KSSPTHPEALTE 330



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 152/321 (47%), Gaps = 36/321 (11%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR-SHWLPRKLFDTLDGV 369
           L G+ ++  + GE  +  L  +G++++ G N  G   +G+R +  S  L R     L+ +
Sbjct: 20  LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQ--LGQRGAPCSAQLKR--IRALETL 75

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVAC 428
            V  V+CG+ H+  V   G++F +G G+ G LG G  +  +  P ++++L  +K+K V+C
Sbjct: 76  HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 135

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER---KLLPTCVTRLVDFD 485
           G +H+ A+ +           GG++F+WG    G+LG   G++   +  P  V  L    
Sbjct: 136 GHYHSLALSE-----------GGQVFSWGSNSDGQLGL--GKKFPSQASPQRVRSLDGIP 182

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-------AKDRSITVVEGKLKEEFV 538
             Q + G   +  L+  G  +  G    GQL   K        K  SI+     LK   V
Sbjct: 183 LAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISA----LKNLGV 238

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             IS G  H  VLT  G V+T+G N  GQLG   + E+  P  VE + D  V  + CGS 
Sbjct: 239 IYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDCGSY 297

Query: 599 ITAAICLH--KSISVGDQSSC 617
            T A      K +S G + +C
Sbjct: 298 HTLAYVYTTGKVVSFGREPTC 318



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +   L+P  +++   + ++ +S G  H+  +++ G+VF WG   DG+
Sbjct: 100 GAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG NN G   + +  
Sbjct: 160 LGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG  HT +++ +G++FT+GD T+G LGH      S P
Sbjct: 220 VSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVEGIDGL-VSQIDCGSYHTLAYV 303


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 147/312 (47%), Gaps = 22/312 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCG 322
           V ++S    HAA V + GEVF  G+      GH+     +  P+LVE L GI  + V+ G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAG 224

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T  LT+ G +YT G N HG    G+ + R      K+ + L    V ++A G  +  
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRP---TPKMIEVLS--SVVQIAAGPSYIL 279

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDIM 440
            V+ +G ++++G G    LGHG   +  QP+ ++  R  G+ +  V+ G  H  A+    
Sbjct: 280 SVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVAL---- 335

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                SN   G ++TWG    G LGH D   K  P  +T L +   VQ    +  T  L 
Sbjct: 336 ----DSN---GYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLV 388

Query: 501 GLGKVYTMGSAVHGQLG--NPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
             G VY  GS   G LG  + +  D+ +   +   L+   V  IS+G YH  V+TS G +
Sbjct: 389 DSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQI 448

Query: 558 YTWGKNANGQLG 569
           + +G N   QLG
Sbjct: 449 FGFGDNERAQLG 460



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 137/291 (47%), Gaps = 21/291 (7%)

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           ++VE  SG N+Q ++ G++ T  ++ S  +Y+ G    G    G   ++     R  F  
Sbjct: 105 QMVETSSG-NMQ-ITTGKYHTLLISNS-SVYSCGSGLCGVLGQGSETTQCVAFTRIDFPP 161

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVK 424
           L   RV  V+    H A V  SG++FT GD +    GH +    + +P+ VESL+G+  K
Sbjct: 162 L--ARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCK 219

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            VA G   T  +              G ++T G    G+LGH D + +  P  +  L   
Sbjct: 220 QVAAGLNFTVFLTR-----------KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV 268

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGIS 542
             VQ + G    + +T  G VY+ GS  +  LG+ +  D  +   + + + K   +  +S
Sbjct: 269 --VQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVS 326

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           +G  H   L S G VYTWGK   G LG GD  E+ TP  + +L+++ V  V
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 21/271 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+ES   +  + ++ G      +T++G V+  G    G+LGH    D   PK++E LS
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS 266

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL-VGERRSRSHWLPRKLFDTL-DGVR 370
             +V  ++ G     ++T++G +Y++G    GA+  +G         PR +      G+ 
Sbjct: 267 --SVVQIAAGPSYILSVTENGTVYSFGS---GANFCLGHGEQHDELQPRAIQKFRRKGIH 321

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +V+ G+ H   + ++G ++T+G G  G LGHG+    + P+ + SL+   V  V    
Sbjct: 322 IVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARK 381

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFV 487
             T  +VD            G ++ +G    G LG +D    ++ L P  +  L      
Sbjct: 382 RKTFVLVD-----------SGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVS 430

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           Q S G   TV +T  G+++  G     QLG+
Sbjct: 431 QISTGLYHTVVITSRGQIFGFGDNERAQLGH 461



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 141/349 (40%), Gaps = 34/349 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-------VSCPKLVECLSGINVQSV 319
           I+ G  H  L++    V+  G G  G LG             +  P L        V  V
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLAR------VVHV 168

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           S        + +SGE++T G N+  +   G R +       +L ++L G+   +VA G  
Sbjct: 169 SASFNHAAFVMQSGEVFTCGDNS--SSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLN 226

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            T  ++  G ++T G  T G LGHG+ Q+   PK +E L    V  +A GP +  ++ + 
Sbjct: 227 FTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS--SVVQIAAGPSYILSVTE- 283

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTV 497
                      G ++++G      LGH +   +L P  + +        V+ S G    V
Sbjct: 284 ----------NGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAV 333

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            L   G VYT G    G LG+    +++   +   LK + V  + +      VL   GSV
Sbjct: 334 ALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSV 393

Query: 558 YTWGKNANGQLGLGD---SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           Y +G    G LG  D   S +   P  ++ LR   V  +  G   T  I
Sbjct: 394 YGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVI 442



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+ ++      + +  +S G +HA  +   G V+ WG+G  G LGH   ++ + 
Sbjct: 303 QHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTT 362

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L    V  V   + +T  L  SG +Y +G    G+    +RR     L  ++ D
Sbjct: 363 PELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILD 422

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           TL    VS+++ G +HT ++++ GQ+F +GD     LGH  L++  +P E+
Sbjct: 423 TLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEI 473



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 22/248 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +    TQ D   PK++E  V+  V  I+ G  +   VT+ G V+ +G G +  
Sbjct: 241 GTNTHGQLGHGDTQ-DRPTPKMIE--VLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 294 LGHKVNMDVSCPKLVECL--SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           LGH    D   P+ ++     GI++  VS G+    AL  +G +YTWG    GA   G+ 
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDE 357

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ---N 408
             ++     +L  +L    V +V   +  T ++  SG ++ +G   FG LG  + +    
Sbjct: 358 IEKT---TPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDK 414

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
           V +P+ +++LR   V  ++ G +HT  I              G++F +GD ++ +LGH  
Sbjct: 415 VLKPRILDTLRTHHVSQISTGLYHTVVITS-----------RGQIFGFGDNERAQLGHDT 463

Query: 469 GERKLLPT 476
               L PT
Sbjct: 464 LRSCLEPT 471


>gi|449266005|gb|EMC77132.1| Serine/threonine-protein kinase Nek8 [Columba livia]
          Length = 692

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 42/339 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           ++ WG G            ++ P  +  L+   VQ VS G  Q   +TKSG +  W    
Sbjct: 321 IYTWGSG------------ITTPLRLPMLNTEVVQ-VSAGRTQKAGVTKSGRLIMWEAPP 367

Query: 343 HGA----DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            GA     L G           +  +   GV +  V+CG+  TA ++  G + T+G G+ 
Sbjct: 368 MGAAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSN 427

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LGHGN  +VSQPK VE+L G ++  VACG  H  A+ +   +R        ++F WG 
Sbjct: 428 GCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSN---ER--------EVFAWGR 476

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG- 517
            D GRLG    E    P  VT   + +  +  CG   ++ LT   ++   GS    +LG 
Sbjct: 477 GDNGRLGLGTLECHNSPQQVTVPPEHEAQRVICGIDSSMVLTVKNQILACGSNRCNKLGL 536

Query: 518 -------NPKAKDR---SITVV---EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
                   P A+D+   + T V      L +E +     G+ H A +T+ G  YT+G N 
Sbjct: 537 DRISSAEEPSAEDQVEEATTFVCAQSSPLNQEPIVCADIGTAHSAAVTASGQCYTFGSNQ 596

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +GQLG    +    P  V  L+  +V  V CG + T AI
Sbjct: 597 HGQLGTNSGRNSRVPHLVVGLQAMKVTVVACGDAFTVAI 635



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    +G   G ++ G+  Q + Q    + + LE    + ++++S G    A +T  
Sbjct: 360 LIMWEAPPMGAAGGPSLPGATEQLQPQ---FVSRFLEGQSGVTIKHVSCGDLFTACLTDR 416

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DVS PK+VE L G  +  V+CG     A++   E++ WG 
Sbjct: 417 GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGR 476

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            ++G   +G      H  P+++    +     +V CG   + +++   Q+   G      
Sbjct: 477 GDNGR--LGLGTLECHNSPQQVTVPPEH-EAQRVICGIDSSMVLTVKNQILACGSNRCNK 533

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACG---PWHTAAIV--DIMVDRCKSNAIGGKLFT 455
           LG   + +  +P   + +   +  +  C    P +   IV  DI      +    G+ +T
Sbjct: 534 LGLDRISSAEEPSAEDQVE--EATTFVCAQSSPLNQEPIVCADIGTAHSAAVTASGQCYT 591

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG   G    +P  V  L        +CG   TV +   G+V T G    G+
Sbjct: 592 FGSNQHGQLGTNSGRNSRVPHLVVGLQAMKVTVVACGDAFTVAIGADGEVCTWGKGARGR 651

Query: 516 LG 517
           LG
Sbjct: 652 LG 653



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 150/391 (38%), Gaps = 36/391 (9%)

Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GV GG     +   +S   T    +   L    +  +V  +S G    A VTK G +  W
Sbjct: 304 GVRGGSARTGIPPPLSSIYTWGSGITTPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMW 363

Query: 287 GEGKDGRLGHKVNMDVS-------CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
                G  G       +         + +E  SG+ ++ VSCG+  T  LT  G I T+G
Sbjct: 364 EAPPMGAAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFG 423

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             ++G    G     S     K+ + L G  + +VACG  H   VS   ++F +G G  G
Sbjct: 424 SGSNGCLGHGNFTDVSQ---PKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNG 480

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LG G L+  + P++V              P H A  V   +D      +  ++   G  
Sbjct: 481 RLGLGTLECHNSPQQV-----------TVPPEHEAQRVICGIDSSMVLTVKNQILACGSN 529

Query: 460 DKGRLG--------------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
              +LG               V+     +    + L     V A  G   +  +T  G+ 
Sbjct: 530 RCNKLGLDRISSAEEPSAEDQVEEATTFVCAQSSPLNQEPIVCADIGTAHSAAVTASGQC 589

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           YT GS  HGQLG    ++  +  +   L+   V  ++ G      + + G V TWGK A 
Sbjct: 590 YTFGSNQHGQLGTNSGRNSRVPHLVVGLQAMKVTVVACGDAFTVAIGADGEVCTWGKGAR 649

Query: 566 GQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           G+LG  D +     P  +E      V SV C
Sbjct: 650 GRLGRKDEETGTPRPVQLEETHPYLVTSVAC 680



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 11/200 (5%)

Query: 430 PWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVD- 483
           P     +V +   R +   +   G+L  W     G  G         +L P  V+R ++ 
Sbjct: 335 PMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGAAGGPSLPGATEQLQPQFVSRFLEG 394

Query: 484 ---FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVK 539
                    SCG + T  LT  G + T GS  +G LG+    D S   +VE  L  E V+
Sbjct: 395 QSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ 454

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            ++ G+ HV  +++   V+ WG+  NG+LGLG  +   +P  V    + + + V+CG   
Sbjct: 455 -VACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVTVPPEHEAQRVICGIDS 513

Query: 600 TAAICLHKSISVGDQSSCSQ 619
           +  + +   I     + C++
Sbjct: 514 SMVLTVKNQILACGSNRCNK 533


>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 445

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 197/425 (46%), Gaps = 46/425 (10%)

Query: 207 YGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK------LLESAV 260
           Y SP I+   +   +  WG G   G +GG ++  +    + V  LL +      L ++  
Sbjct: 36  YTSPDIDSDPVTLQLFSWGRGA-SGQLGGGIE-EIRMYPSPVANLLFRSDQSFSLAQTPG 93

Query: 261 MLDVQN------ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
            +D  +      IS G  H+ L T +G+++ WG+G  GRLG      V  P L       
Sbjct: 94  RIDADSSSFRIGISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEH 152

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           +++ ++ G   + ALT  G+++TWG+   GA  +G +      +PR++ D+ D  ++S +
Sbjct: 153 SIRCIALGGLHSVALTHQGDVFTWGYGGFGA--LGHKVYTRELVPRRVDDSWD-CKISAI 209

Query: 375 ACGEWHTAIVSTSGQLFTYG--DGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVA 427
           A    HTA ++ SG+L+ +G  +G   +             +S P +V++L  + V SV+
Sbjct: 210 ATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVS 268

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG + T A+              G+L+ WG      LG  D      P  V  L      
Sbjct: 269 CGGFFTMALTKE-----------GQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRIT 317

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           Q +CG   ++ LT  GKV + G   HGQLG+   +++ +      L ++ +  I+SG   
Sbjct: 318 QIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSS 377

Query: 548 VAVLTSGGSVYTWGKNANGQLGL-GDSQERETPTFVEALRD------RQVESVVCGSSIT 600
            A +T GG ++ WG   + QLG+ G  + + TP  V  L +       +V S+  G+S  
Sbjct: 378 SAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS-- 435

Query: 601 AAICL 605
            A+CL
Sbjct: 436 HALCL 440



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%)

Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
           A+ + V ++S G      +TKEG+++ WG   +  LG   N+    P  V  L G+ +  
Sbjct: 259 ALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQ 318

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           ++CG + + ALT+ G++ +WGH  HG   +G    R+  +P ++ + L   ++  +A G 
Sbjct: 319 IACGGYHSLALTEEGKVLSWGHGGHGQ--LGSSSLRNQKVPTEI-EALADKKIVFIASGG 375

Query: 379 WHTAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESL------RGLKVKSVACG 429
             +A ++  G+L+ +G   D   GV G   +Q  + P EV  L      +  KV S++ G
Sbjct: 376 SSSAAITDGGELWMWGNAKDFQLGVPGLPEIQ--TTPVEVNFLTEEDECQPHKVISISIG 433

Query: 430 PWHTAAIV 437
             H   +V
Sbjct: 434 ASHALCLV 441


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
           KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
           KNP414]
          Length = 1224

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 27/330 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +SL   H   +  +G V+ WG    G+LG   +   S P  V  L+G+ +  ++ GE  T
Sbjct: 694 VSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM--IAGGENHT 751

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL   G ++TWG+N +G   +G+  + + + P ++  TL     + V+ GE H+  + +
Sbjct: 752 VALRSDGTLHTWGYNGYG--QLGDDSTTTRYSPVQV-STL--TNWTAVSAGENHSLALKS 806

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++ +G   +G LG G   +   P +V+ L G  V ++A G   + A+        KS
Sbjct: 807 DGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL--------KS 856

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   G +++WG    G LG+    R  +P  V  L D   + A  G    V L   G V+
Sbjct: 857 D---GTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGSVF 911

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G   +G+LGN     +S  V  G      +KGI++G YH   L S G+V++WG N  G
Sbjct: 912 AWGYNGNGELGNSSTISQSTPVQSGVTG---IKGIAAGPYHTLALKSDGTVWSWGYNGYG 968

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCG 596
           QLG G++  R  P  +  L    + S+  G
Sbjct: 969 QLGSGNNTSRSVPAAIPGL--ASMASIAAG 996



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WG+   G ++G         N T   + +P  ++ A++ DV+ I+ G  H   + K+
Sbjct: 860  VWSWGQNTYG-ELG---------NGTTTRSSVP--VQVALLTDVKAIAAGDYHGVALKKD 907

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWG 339
            G VF WG   +G LG+   +  S P      SG+  ++ ++ G + T AL   G +++WG
Sbjct: 908  GSVFAWGYNGNGELGNSSTISQSTP----VQSGVTGIKGIAAGPYHTLALKSDGTVWSWG 963

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            +N +G    G   SRS  +P  +        ++ +A GE  +      G L+++G    G
Sbjct: 964  YNGYGQLGSGNNTSRS--VPAAIPGL---ASMASIAAGENQSIAYGNDGILYSWGRNANG 1018

Query: 400  VLGHGNLQNVSQPKEV 415
             LG+G   + + P +V
Sbjct: 1019 QLGNGTTVDTNVPHKV 1034


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 21/310 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
             +IS G +H+A++T+ G ++ +G    G+LG       + P  V+ L    V  V+CG 
Sbjct: 38  AMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGR 97

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T   TK+G +Y++G  + G    G+ +  +   P+ +   L   +   ++ G  H+A 
Sbjct: 98  SHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATS--PQLI--NLPEQKYKLLSAGTDHSAA 153

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++T G L+ +G G+ G LG GN  +V  PKE++      V  V+CG +HTA + D     
Sbjct: 154 LTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHS--SVSWVSCGYYHTAIVTD----- 206

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                  GKL+T+G+ + G+LG  +   E    P  V  + +      +CG   T  ++ 
Sbjct: 207 ------DGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISD 259

Query: 502 LGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +G +YT G  +HGQLGN P     S+     +L E   K +S G  H AV+T  G++YT+
Sbjct: 260 VGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTF 319

Query: 561 GKNANGQLGL 570
           G   +G+LG+
Sbjct: 320 GDGRHGKLGI 329



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 23/269 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  ++S     V  ++ G  H  + TK G ++ +G G DG+LG       + P+L+  L 
Sbjct: 79  PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LP 137

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRV 371
               + +S G   + ALT  G +Y WG  + G   +G   + S   P++L F +     V
Sbjct: 138 EQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQ--LGLGNTDSVETPKELKFHS----SV 191

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLG--HGNLQNVSQPKEVESLRGLKVKSVACG 429
           S V+CG +HTAIV+  G+L+T+G+  FG LG     L++ + PK VES+   K+K VACG
Sbjct: 192 SWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESIT-EKIKLVACG 250

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQ 488
             HTA I D+           G L+T+GD   G+LG+     +L LP  V RL +     
Sbjct: 251 GAHTAVISDV-----------GNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKY 299

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            SCG   T  +T  G +YT G   HG+LG
Sbjct: 300 VSCGDNHTAVITEKGAMYTFGDGRHGKLG 328



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 30/277 (10%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           + ++G I+T+G +    +L           P K +   D  +   ++CG+ H+AI++ SG
Sbjct: 9   IPETGAIFTFGKSRFADNL-----------PSKFWIRND--KAMHISCGDEHSAIITESG 55

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +L+T+G   +G LG G+++  ++P  V+SL+   V  VACG  HT               
Sbjct: 56  RLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTK---------- 105

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+L+++G    G+LG  D +    P  +  L +  +   S G   +  LT  G +Y  
Sbjct: 106 -AGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQKYKLLSAGTDHSAALTTDGTLYMW 163

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           GS   GQLG     D   T  E K     V  +S G YH A++T  G +YT+G+   G+L
Sbjct: 164 GSGSEGQLGLGNT-DSVETPKELKFHSS-VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKL 221

Query: 569 GLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GL + Q  +  TP  VE++ ++ ++ V CG + TA I
Sbjct: 222 GLTEDQLEDTTTPKHVESITEK-IKLVACGGAHTAVI 257



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 144/287 (50%), Gaps = 19/287 (6%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T+SG +YT+G N+ G   +G  +  +         +L    V+ VACG 
Sbjct: 41  ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTT---KPGCVKSLKQEGVNLVACGR 97

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            HT + + +G+L+++G G+ G LG G+ Q  + P+ + +L   K K ++ G  H+AA+  
Sbjct: 98  SHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQKYKLLSAGTDHSAALT- 155

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                       G L+ WG   +G+LG  + +    P  +       +V  SCG   T  
Sbjct: 156 ----------TDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYHTAI 203

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAK-DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           +T  GK+YT G    G+LG  + + + + T    +   E +K ++ G  H AV++  G++
Sbjct: 204 VTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNL 263

Query: 558 YTWGKNANGQLGLGDS-QERETPTFVEALRDRQVESVVCGSSITAAI 603
           YT+G   +GQLG G S  +   P  V  L + + + V CG + TA I
Sbjct: 264 YTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVI 310


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 15/269 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCG 322
           +  I+ G++H+  +T+ G+V  WG+ + G+LGH  + DV   PK+V  L    V  ++CG
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACG 147

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHT 381
              + ALT  GE+Y+WG N +G   V      S    P +L  TL G+  + +ACG  HT
Sbjct: 148 NNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRL-TTLLGIPAAAIACGGNHT 206

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++S S  +F +G    G LG  +  N + P ++++LR L V+ VACG   +  + +   
Sbjct: 207 FLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTN--- 263

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT- 500
                    G +FT G    G+LGH     ++LP  V  L+     Q +CG   T+ L  
Sbjct: 264 --------EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVP 315

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
             G++Y  G    GQLG    K  ++  V
Sbjct: 316 SRGRIYGFGLGSSGQLGTRNTKSLNLPQV 344



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 20/357 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  ++ G +H   +T  G+V+  G     +LGH+  +    P  +  L    +  ++CG 
Sbjct: 38  VNQVACGHRHTLFLTASGKVYACGSNDYSQLGHE--LPTKRPLQIPELEDYVITQIACGS 95

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + ALT+ G++ +WG N  G   +G    +      K+   L    V ++ACG  H+  
Sbjct: 96  RHSMALTEWGQVLSWGDNECGQ--LGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLA 153

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ---PKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           ++  G+L+++G   +G LG  +   +SQ   P  + +L G+   ++ACG  HT  I    
Sbjct: 154 LTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLI---- 209

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
               KS+A+    F WG  + G+LG  D   +  PT +  L        +CG   +V LT
Sbjct: 210 ---SKSSAV----FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT 262

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G V+T G+  +GQLG+  + +  +  +  +L    +  ++ G+ H +A++ S G +Y 
Sbjct: 263 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYG 322

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI-TAAICLHKSISVGDQS 615
           +G  ++GQLG  +++    P  V         S +  SS    ++ +H+  S GDQS
Sbjct: 323 FGLGSSGQLGTRNTKSLNLPQVVIGPWVSPSGSALLQSSDEKISVVIHQIFSGGDQS 379



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 145/332 (43%), Gaps = 30/332 (9%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       V  V+CG   T  LT SG++Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 340 HNNHGADLVGERRSRSHWLPRKL---FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            N++            H LP K       L+   ++++ACG  H+  ++  GQ+ ++GD 
Sbjct: 62  SNDYS--------QLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDN 113

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LGH + Q+V Q PK V  L    V  +ACG  H+ A+              G+L++
Sbjct: 114 ECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL-----------TCCGELYS 162

Query: 456 WGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           WG    G+LG V    +L     P  +T L+       +CG   T  ++    V+  G  
Sbjct: 163 WGSNIYGQLG-VKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRN 221

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG     +R+       L+   V+ ++ G      LT+ G V+T G  A GQLG G
Sbjct: 222 NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 281

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            S     P  V  L    +  V CG+  T A+
Sbjct: 282 FSSNEMLPRMVMELMGSTISQVACGNRHTLAL 313



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 25/261 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG+   G  +G A D  V Q        LPK++   V   V  I+ G  H+  +T  
Sbjct: 107 VLSWGDNECG-QLGHASDQDVIQ--------LPKIVRYLVSKTVVQIACGNNHSLALTCC 157

Query: 281 GEVFCWGEGKDGRLGHKVNMDVS---CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           GE++ WG    G+LG K   ++S    P  +  L GI   +++CG   T  ++KS  ++ 
Sbjct: 158 GELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFG 217

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG NN G   + +  +R++    K   TL GVR   VACG+  +  ++  G +FT G G 
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTL-GVRF--VACGDEFSVFLTNEGGVFTCGAGA 274

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           +G LGHG   N   P+ V  L G  +  VACG  HT A+V             G+++ +G
Sbjct: 275 YGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALV----------PSRGRIYGFG 324

Query: 458 DADKGRLGHVDGERKLLPTCV 478
               G+LG  + +   LP  V
Sbjct: 325 LGSSGQLGTRNTKSLNLPQVV 345


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 58/346 (16%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-------ADLVGERRSRSHW 357
           P  ++ L    +  V+ G+  T A+   G +Y+WG +  G        DL  +     + 
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ------ 411
              ++ + L  V+V ++ACG+ HT  ++  G+L+++G G  G LGH +   + +      
Sbjct: 74  PTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCP 133

Query: 412 ----PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
               PK +  L+ L+VK VACG  HT A+++            G L++WG    G+LGH 
Sbjct: 134 YQPKPKLIVVLKNLEVKQVACGKAHTVAVLN-----------NGHLYSWGAGACGQLGHP 182

Query: 468 DGER----------KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           D             + +P CVT L  F  + ASCG + T+ LT  G++Y  G    GQLG
Sbjct: 183 DTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLG 242

Query: 518 NPKAKDRSITV-------VEGK---LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
                   + V       V  K   L+  F+  +S G  H   L+  G VY WG+   GQ
Sbjct: 243 FGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQ 302

Query: 568 LGLGDSQE----------RETPTFVEALRDRQVESVVCGSSITAAI 603
           LGL D ++          +  P  V AL ++++ ++ CG + T A+
Sbjct: 303 LGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLAL 348



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 153/356 (42%), Gaps = 64/356 (17%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----------PKLVECLSG 313
           +  ++ G  H   V  +G V+ WG    G+LG     D+            P+++E L  
Sbjct: 25  IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQS 84

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWG--------HNNHGADLVGERRSRSHWLPR-KLFD 364
           + V  ++CG+  T ALT+ G++Y+WG        H +  A  + +      + P+ KL  
Sbjct: 85  VKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSA--MPKDEDGCPYQPKPKLIV 142

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ----------PKE 414
            L  + V +VACG+ HT  V  +G L+++G G  G LGH +  +             P+ 
Sbjct: 143 VLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRC 202

Query: 415 VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           V +L+  K+   +CG  HT  + D            G+++ +G    G+LG  +  +  L
Sbjct: 203 VTALKPFKLIHASCGDVHTMVLTD-----------QGEIYCFGGGSCGQLGFGNISQMPL 251

Query: 475 ----------PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR 524
                     P  +  L     V  SCG   ++ L+  G VY  G A +GQLG    +D 
Sbjct: 252 DVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDL 311

Query: 525 SITVVEGKLKEEF-----------VKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
                + K  + F           +  IS G  H   LT GG +Y++G N  GQLG
Sbjct: 312 PKNT-DNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLG 366



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 66/348 (18%)

Query: 216 DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDAL----LPKLLESAVMLDVQNISLGA 271
           DI  +V  WG    G  +G A   S+    T V+       P+++E    + V  I+ G 
Sbjct: 39  DIKGNVYSWGASACG-QLGLA---SMKDLPTDVEGYPYQPTPRIIELLQSVKVIQIACGD 94

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-------------PKLVECLSGINVQS 318
            H   +T++G+++ WG G  G+LGH    D S              PKL+  L  + V+ 
Sbjct: 95  AHTVALTQDGKLYSWGGGGCGQLGHP---DTSAMPKDEDGCPYQPKPKLIVVLKNLEVKQ 151

Query: 319 VSCGEFQTCALTKSGEIYTW--------GHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           V+CG+  T A+  +G +Y+W        GH +  +    E       +PR     L   +
Sbjct: 152 VACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPR-CVTALKPFK 210

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ----------PKEVESLRG 420
           +   +CG+ HT +++  G+++ +G G+ G LG GN+  +            PK++ESL+G
Sbjct: 211 LIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQG 270

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL------- 473
           + + S++CG  H+ A+           +  G ++ WG+A  G+LG +D  R L       
Sbjct: 271 IFIVSLSCGDSHSMAL-----------SREGHVYAWGEATYGQLG-LDDIRDLPKNTDNK 318

Query: 474 ----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                P  V  L++   V  SCG   T+ LT  G +Y+ G    GQLG
Sbjct: 319 PYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLG 366



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 26/189 (13%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH----KVNMDV-SCP- 305
           +P+ + +     + + S G  H  ++T +GE++C+G G  G+LG     ++ +DV SCP 
Sbjct: 199 IPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPF 258

Query: 306 ----KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-------DLVGERRSR 354
               K +E L GI + S+SCG+  + AL++ G +Y WG   +G        DL     ++
Sbjct: 259 MPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNK 318

Query: 355 SHW-LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
            +   P+K+   ++  ++  ++CGE HT  ++  G L+++G  T G LG    Q V   K
Sbjct: 319 PYQPFPQKVVALMNK-KIVAISCGETHTLALTEGGHLYSFGGNTCGQLG----QYV---K 370

Query: 414 EVESLRGLK 422
           E+E  RG K
Sbjct: 371 ELEKGRGKK 379



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 22/170 (12%)

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK-- 532
           P  +  L +    Q + G   TV +   G VY+ G++  GQLG    KD   T VEG   
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLP-TDVEGYPY 72

Query: 533 ---------LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-------- 575
                    L+   V  I+ G  H   LT  G +Y+WG    GQLG  D+          
Sbjct: 73  QPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 576 --RETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
             +  P  +  L++ +V+ V CG + T A+  +  +      +C Q   P
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHP 182


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 27/330 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +SL   H   +  +G V+ WG    G+LG   +   S P  V  L+G+ +  ++ GE  T
Sbjct: 634 VSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM--IAGGENHT 691

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL   G ++TWG+N +G   +G+  + + + P ++  TL     + V+ GE H+  + +
Sbjct: 692 VALRSDGTLHTWGYNGYG--QLGDDSTTTRYSPVQV-STL--TNWTAVSAGENHSLALKS 746

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++ +G   +G LG G   +   P +V+ L G  V ++A G   + A+        KS
Sbjct: 747 DGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL--------KS 796

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   G +++WG    G LG+    R  +P  V  L D   + A  G    V L   G V+
Sbjct: 797 D---GTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAA--GDYHGVALKKDGSVF 851

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G   +G+LGN     +S  V  G      +KGI++G YH   L S G+V++WG N  G
Sbjct: 852 AWGYNGNGELGNSSTISQSTPVQSGVTG---IKGIAAGPYHTLALKSDGTVWSWGYNGYG 908

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCG 596
           QLG G++  R  P  +  L    + S+  G
Sbjct: 909 QLGNGNNTSRSVPAAIPGL--ASIASIAAG 936



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+   G ++G         N T   + +P  ++ A++ DV+ I+ G  H   + K+
Sbjct: 800 VWSWGQNTYG-ELG---------NGTTTRSSVP--VQVALLTDVKAIAAGDYHGVALKKD 847

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWG 339
           G VF WG   +G LG+   +  S P      SG+  ++ ++ G + T AL   G +++WG
Sbjct: 848 GSVFAWGYNGNGELGNSSTISQSTP----VQSGVTGIKGIAAGPYHTLALKSDGTVWSWG 903

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +N +G    G   SRS  +P  +        ++ +A GE  +      G L+++G    G
Sbjct: 904 YNGYGQLGNGNNTSRS--VPAAIPGL---ASIASIAAGENQSIAYGNDGILYSWGRNANG 958

Query: 400 VLGHGNLQNVSQPKEV 415
            LG+G   + + P +V
Sbjct: 959 QLGNGTTVDTNVPHKV 974


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 161/340 (47%), Gaps = 33/340 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG-INVQSVS 320
           + V+ I+ G +H   +  +G+V+  G  ++G LG     + S       LSG +N+  ++
Sbjct: 68  VSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIA 127

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G     A+   G ++ WG N+HG  L       S  +P+++    + V   +VACG  H
Sbjct: 128 AGRAHNMAVADDGRLFAWGSNSHG-QLALPSNITSTDIPKRVVSLTETV---QVACGTDH 183

Query: 381 TAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           T  +  SG++F +G   DG          + +  PKE+E    L V  V  G  +  A+ 
Sbjct: 184 TIAIVESGRIFVWGLQPDG----------RVLYAPKEIEFFMALPVVQVNAGSDYYVAL- 232

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                      + G +F WG  + G+LG  D + +  P  VT L   + V  +CG   TV
Sbjct: 233 ----------TVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTV 282

Query: 498 GLTGLGKVYTMGSAVHGQLGNP-KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            LT  G+++  GS   GQLG+  K   ++  +   ++    V  ++ G  H   L +GG 
Sbjct: 283 ALTHEGRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLAL-AGGK 341

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           +Y +G N++GQLG G+ + + TP  ++AL D  V SV  G
Sbjct: 342 MYAFGLNSSGQLGSGNVRSQVTPRPIDALTD--VVSVFAG 379



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 116/262 (44%), Gaps = 36/262 (13%)

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKS 425
           DGV V  +A GE HT  ++  G++++ G    G LG G  Q  S       L G + +  
Sbjct: 66  DGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQ 125

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT------ 479
           +A G  H  A+ D            G+LF WG    G+L         LP+ +T      
Sbjct: 126 IAAGRAHNMAVAD-----------DGRLFAWGSNSHGQLA--------LPSNITSTDIPK 166

Query: 480 RLVDF-DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ-LGNPKAKDRSITVVEGKLKEEF 537
           R+V   + VQ +CG   T+ +   G+++  G    G+ L  PK  +  + +         
Sbjct: 167 RVVSLTETVQVACGTDHTIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMALP-------- 218

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V  +++GS +   LT  G+++ WG N  GQLG  D++ER TP  V  L    V  V CG 
Sbjct: 219 VVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGH 278

Query: 598 SITAAICLHKSISVGDQSSCSQ 619
           S T A+     + V    SC Q
Sbjct: 279 SHTVALTHEGRLFVCGSDSCGQ 300



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 5/177 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PK +E  + L V  ++ G+ +   +T  G +F WG  + G+LG   N + + P  V  L 
Sbjct: 208 PKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLH 267

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            +NV  V+CG   T ALT  G ++  G ++ G  L   R+  S      + + L G  V+
Sbjct: 268 SLNVVHVACGHSHTVALTHEGRLFVCGSDSCG-QLGSGRKVPSQNTMLAVTEML-GTHVT 325

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +VACG  HT  ++  G+++ +G  + G LG GN+++   P+ +++L    V SV  G
Sbjct: 326 RVACGRCHTLALA-GGKMYAFGLNSSGQLGSGNVRSQVTPRPIDALT--DVVSVFAG 379


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 152/337 (45%), Gaps = 23/337 (6%)

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E EV+  G+   G LGH         + ++ L    +  +  G   T  LT  G+++T G
Sbjct: 372 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           +N++G    G     SH       D+  G   +    G  HT +VST G++ T G    G
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDS--GSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 489

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHGN  + S PK + SL    V+ V+C  +HT       V  C+   +   L+T+G  
Sbjct: 490 QLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT-------VLACEDGNL-QNLYTFGRN 541

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           D G+LGH D   + +P  V  L D   V  +CG+  T+ +T  GK +  G   +GQLG  
Sbjct: 542 DYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGID 601

Query: 520 KAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             +++   V V G L+ +    I  G YH   L SG  ++ +G+N  GQLGLG S    T
Sbjct: 602 TMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASST 661

Query: 579 PT------------FVEALRDRQVESVVCGSSITAAI 603
                          ++ L  + +  + CG   T A+
Sbjct: 662 SNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 698



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 165/361 (45%), Gaps = 37/361 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS----CPKLVECLSGINVQS 318
           ++  I  G +H  ++T +G+VF  G   +G+ G      VS     PK+    SG +   
Sbjct: 407 EIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMD---SGSSQAH 463

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
              G   T  ++  G + T G+N  G   +G   + S  +P K+  +L+   V  V+C  
Sbjct: 464 AYNGCEHTILVSTDGRVATCGYNYRGQ--LGHGNTTSESVP-KIIRSLENKIVRLVSCSY 520

Query: 379 WHTAIVSTSGQL---FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           +HT +    G L   +T+G   +G LGH +  +   P+ VE+L   ++ SVACG +HT  
Sbjct: 521 YHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMV 580

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRM 494
           +            + GK F +G  D G+LG    E +L P  V   L   + ++  CG  
Sbjct: 581 V-----------TVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYY 629

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE--------GKLKEEF----VKGIS 542
            T+ L     ++  G   +GQLG  ++   S + ++         +L +E     +  I+
Sbjct: 630 HTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIA 689

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            G YH   ++  G +Y +G+N +GQLG GD+ ER  P  ++    +++  V  G   T  
Sbjct: 690 CGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVV 749

Query: 603 I 603
           +
Sbjct: 750 L 750



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEV---FCWGEGKDGRLGHKVNMDVSCPKLV 308
           +PK++ S     V+ +S    H  L  ++G +   + +G    G+LGH  ++D   P+ V
Sbjct: 501 VPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFV 560

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           E LS   + SV+CG++ T  +T SG+ + +G N++G   +G     +   P ++   L+ 
Sbjct: 561 EALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQ--LGIDTMENQLAPVQVRGGLER 618

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--------NL----QNVSQPKEVE 416
               ++ CG +HT  + +   LF +G   +G LG G        NL    Q  S  + ++
Sbjct: 619 QECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLID 678

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L G  +  +ACG +HT A+ D            G ++ +G  + G+LG  D   ++ P 
Sbjct: 679 ELEGKDIVRIACGCYHTIAVSD-----------NGVMYVFGRNNHGQLGTGDTTERVYPF 727

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTG 501
            +   V       + G   TV LTG
Sbjct: 728 PIDDFVGKRIALVAAGFYHTVVLTG 752



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 19/276 (6%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+++ G N++G    G+  SR  +   +    L    + ++  G  HT +++  G++FT 
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSF---ERIQALQQKEIIQIGAGNEHTVVLTADGKVFTC 430

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           G    G  G G    VS   E+  +  G        G  HT  +           +  G+
Sbjct: 431 GYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILV-----------STDGR 479

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT---GLGKVYTMG 509
           + T G   +G+LGH +   + +P  +  L +      SC    TV       L  +YT G
Sbjct: 480 VATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFG 539

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              +GQLG+  + DR I      L ++ +  ++ G YH  V+T  G  + +GKN  GQLG
Sbjct: 540 RNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLG 599

Query: 570 LGDSQERETPTFVEALRDRQ-VESVVCGSSITAAIC 604
           +   + +  P  V    +RQ    + CG   T A+C
Sbjct: 600 IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC 635


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 161/348 (46%), Gaps = 46/348 (13%)

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQ-SVSCGEFQTCALTKSGEIY 336
           T   EVF WG GK              P+ ++  +G +    VS G      +T   E+Y
Sbjct: 458 TVTSEVFFWGGGK------------HIPQKLDVFTGGSTAIEVSAGFCHFAVVTIEKELY 505

Query: 337 TWGHNNHGADLVGE--RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           TW +   G ++VG+    +R+ +   K  D   G+ + +  CGE  T I++ SG +++ G
Sbjct: 506 TWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCG 565

Query: 395 DGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
              +G LG   +   NV  P ++++L  LKV S+ACG  H  A+ +I           G 
Sbjct: 566 SDYYGCLGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNI-----------GS 614

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF-VQASCGRMLTVGLTGLGKVYTMGS- 510
           ++TWG+ + GRLG  +     LP  VT    +++ V+ +CGR  T  LT  G +   G+ 
Sbjct: 615 VYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNN 674

Query: 511 -----AVHGQLGNPKAKDRSITVVEGK----------LKEEFVKGISSGSYHVAVLTSGG 555
                A++  +      D+S T  +            L+   +  ++SG  H AV+   G
Sbjct: 675 ECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHSAVVDEFG 734

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRD-RQVESVVCGSSITAA 602
            + T+G N  G+LGLGD Q R  P+ V  L + ++V    CG + T  
Sbjct: 735 RLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTVV 782



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 23/321 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           +S G  H A+VT E E++ W     G    G+L H        PK V+  +GI ++   C
Sbjct: 488 VSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVC 547

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           GE  T  LT+SG++Y+ G + +G  L  E    S+ L     D L  ++V  +ACG+ H 
Sbjct: 548 GEDFTIILTESGDVYSCGSDYYGC-LGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHV 606

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHT------A 434
             ++  G ++T+G+G  G LG GN  + + P+ V        +  + CG  +T       
Sbjct: 607 VALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNG 666

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKG----RLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            ++    + C   A+   +   G+ DK     ++ +V      LPT V  L  +  V  +
Sbjct: 667 HLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVT-----LPTPVRPLRSYRIVSMA 721

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVA 549
            G+  +  +   G++ T GS   G+LG    + R+  ++V G L  + V   + G     
Sbjct: 722 SGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTV 781

Query: 550 VLTSGGSVYTWGKNANGQLGL 570
           V T+   +++WG   NG+LGL
Sbjct: 782 VATADNQIFSWGCGENGRLGL 802



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 32/284 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK--VNMDVSCPKLVEC 310
           PK ++    + ++    G     ++T+ G+V+  G    G LG +     +V  P  ++ 
Sbjct: 531 PKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDA 590

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           LS + V S++CG+    ALT  G +YTWG+  HG   +G +   +  LP+ +        
Sbjct: 591 LSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFN--LPQLVTLPEKYNY 648

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-------HGN---------LQNVSQPKE 414
           + K+ CG  +T I++++G L  +G+     L         GN         +  V+ P  
Sbjct: 649 IVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTP 708

Query: 415 VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           V  LR  ++ S+A G  H+A + +            G+L T+G    G LG  D + +  
Sbjct: 709 VRPLRSYRIVSMASGKSHSAVVDEF-----------GRLLTFGSNTFGELGLGDYQSRNF 757

Query: 475 PTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           P+ V+ L++   V   +CG   TV  T   ++++ G   +G+LG
Sbjct: 758 PSLVSGLLNGKEVTICNCGDNFTVVATADNQIFSWGCGENGRLG 801


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   +   P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 149/318 (46%), Gaps = 30/318 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECL 311
           P+ + +     + +++ G  H+  ++  G++F WG G DG+LG     D V+ P+L++ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +   +  VSCG +   AL   G+ +TWG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 192

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           ++VA G  H+  +S SG +F +G    G LG  + ++   P  V+ LR  KV  ++CG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HTA +              G +FT+G    G+LGH     ++ P  V  L+  +  Q +C
Sbjct: 253 HTAVLTK-----------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 492 GRMLTVGLT-GLGKVYTMGSAVHGQLGNPK---------------AKDRSITVVEGKLKE 535
           GR  T+      G +Y  G    GQLG                  A    ++    + K 
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKY 361

Query: 536 EFVKGISSGSYHVAVLTS 553
             VK I SG     VL S
Sbjct: 362 HIVKQIFSGGDQTFVLCS 379



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 148/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G  L  ER       P ++    D   +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKG-QLGHEREGNK---PEQIGALAD-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSDR-----------GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRTQ---KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSS----------GLIYAFGCGARGQLG 328


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 151/319 (47%), Gaps = 27/319 (8%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSV 319
           + +V  +S    HAA V + GEVF  G+      GHK  N  +  P+LVE L  ++ + V
Sbjct: 162 LANVVQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQV 221

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGE 378
           S G   T  LT+ G++YT G N HG    G+   R      K+ + L+G+  V ++A G 
Sbjct: 222 SVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRP---TPKIIELLEGIGPVVQIAAGP 278

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAI 436
            +   V+ +G ++++G G+   LGHG   +  QP+ +++ R   + V  V+ G  H  A+
Sbjct: 279 SYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                         G +++WG    G LGH D   K LP+ V  L     VQA   +  T
Sbjct: 339 DS-----------SGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKT 387

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT------VVEGKLKEEFVKGISSGSYHVAV 550
             L   G VY  G    G LG P   DR IT       V   L+   V  IS+G YH  V
Sbjct: 388 FVLVDDGSVYGFGCMGFGSLGFP---DRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVV 444

Query: 551 LTSGGSVYTWGKNANGQLG 569
           +T+ G ++ +G N   QLG
Sbjct: 445 VTNQGQMFGFGDNERVQLG 463



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 142/341 (41%), Gaps = 22/341 (6%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINVQSVSCGEFQTCA 328
            ++  L+ ++  V+  G    G LGH       C     +   S  NV  VS        
Sbjct: 119 GRYHTLLIRDSSVYSCGSSLCGVLGHGAET-TQCVAFTRIRFPSLANVVQVSASHNHAAF 177

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           + +SGE++T G N+  +   G + +       +L + L  V   +V+ G   T  ++  G
Sbjct: 178 VLQSGEVFTCGDNS--SFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQG 235

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSN 447
           QL+T G  T G LGHG+  +   PK +E L G+  V  +A GP +  A+ D         
Sbjct: 236 QLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTD--------- 286

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDFDFVQASCGRMLTVGLTGLGKV 505
              G ++++G      LGH +   +  P  +   R  D   V  S G    V L   G V
Sbjct: 287 --NGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFV 344

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y+ G    G LG+    D+++  +   LK        +      VL   GSVY +G    
Sbjct: 345 YSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGF 404

Query: 566 GQLGLGD---SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G LG  D   +++  TP  +++LR  +V  +  G   T  +
Sbjct: 405 GSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVVV 445



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 20/272 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E+   +  + +S+G      +T++G+++  G    G+LGH   +D   PK++E L 
Sbjct: 207 PRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLE 266

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
           GI  V  ++ G     A+T +G +Y++G+ ++    +G       + PR +  F   D +
Sbjct: 267 GIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFC--LGHGEQHDEFQPRAIQTFRRKD-I 323

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V  V+ G+ H   + +SG ++++G G  G LGHG+  + + P  V  L+          
Sbjct: 324 HVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACAR 383

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
              T  +VD            G ++ +G    G LG  D    E+ + P  +  L     
Sbjct: 384 KRKTFVLVD-----------DGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRV 432

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            Q S G   TV +T  G+++  G     QLG+
Sbjct: 433 SQISTGLYHTVVVTNQGQMFGFGDNERVQLGH 464



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 4/172 (2%)

Query: 247 QVDALLPKLLESAVMLDVQ--NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D   P+ +++    D+   ++S G +HA  +   G V+ WG+G  G LGH   +D + 
Sbjct: 306 QHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTL 365

Query: 305 PKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
           P LV CL S + VQ+ +  + +T  L   G +Y +G    G+    +R      +  ++ 
Sbjct: 366 PSLVNCLKSRLAVQACA-RKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVL 424

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           D+L   RVS+++ G +HT +V+  GQ+F +GD     LGH  L+   QP E+
Sbjct: 425 DSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEI 476



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 129/283 (45%), Gaps = 23/283 (8%)

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           S  N+Q V+ G + T  L +   +Y+ G +  G    G   ++     R  F +L    V
Sbjct: 110 SACNMQ-VTTGRYHT-LLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSL--ANV 165

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGP 430
            +V+    H A V  SG++FT GD +    GH +    + +P+ VE+L+ +  K V+ G 
Sbjct: 166 VQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGL 225

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQA 489
             T     + + R       G+L+T G    G+LGH D   +  P  +  L      VQ 
Sbjct: 226 NFT-----VFLTR------QGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQI 274

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFVKGISSGS 545
           + G    + +T  G VY+ G   +  LG+ +  D    R+I     + K+  V  +S+G 
Sbjct: 275 AAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTF--RRKDIHVVHVSAGD 332

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
            H   L S G VY+WGK   G LG GD  ++  P+ V  L+ R
Sbjct: 333 EHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSR 375


>gi|291221142|ref|XP_002730582.1| PREDICTED: NIMA-related kinase 8-like [Saccoglossus kowalevskii]
          Length = 696

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 150/335 (44%), Gaps = 39/335 (11%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           ++CWG G    L   V + VS        S   V  VS G  Q   +TK+G +  W  ++
Sbjct: 324 IYCWGNG----LQSPVKLPVSH-------SDTQVIEVSTGRTQKAGVTKNGRLIIWEVSS 372

Query: 343 HGAD--LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            G +  L G    +      +  +   GV +  V+CG+  TA ++  G L TYG G  G 
Sbjct: 373 VGNNTTLPGSVEQQIPTFVARFLEGQSGVTIKHVSCGDLFTACLTDRGILMTYGSGANGC 432

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LGHG   +VSQ K VE L G +V  V+CG  H  AI +             ++F+WG  D
Sbjct: 433 LGHGTFHDVSQAKIVEELLGFEVILVSCGTSHVIAITN-----------DHEVFSWGRGD 481

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--- 517
            GRLG    E    P  V     +      CG   ++ +T  G +   G+  H +LG   
Sbjct: 482 NGRLGLDTTESHKSPQPVIIPDPYQARSVHCGVDCSIIVTVDGTLLVCGNNRHNKLGLDD 541

Query: 518 ---NPKAKDRS---ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG-- 569
               P+  D      +VV   L++  +K ++ G+ H AV+T  G  YT+G N  GQLG  
Sbjct: 542 NGKTPRQVDEVHIFTSVVSEPLRQLHIKSVAIGTSHTAVVTDKGECYTFGSNQFGQLGHG 601

Query: 570 -LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +G +++     F E  +   +  V CG + T AI
Sbjct: 602 VVGQNRQMGKVLFPEGTK---ILDVACGDTYTVAI 633



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 154/334 (46%), Gaps = 42/334 (12%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++IW    +G +    + GSV Q   Q+   + + LE    + ++++S G    A +T  
Sbjct: 365 LIIWEVSSVGNNT--TLPGSVEQ---QIPTFVARFLEGQSGVTIKHVSCGDLFTACLTDR 419

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DVS  K+VE L G  V  VSCG     A+T   E+++WG 
Sbjct: 420 GILMTYGSGANGCLGHGTFHDVSQAKIVEELLGFEVILVSCGTSHVIAITNDHEVFSWGR 479

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            ++G   +G   + SH  P+ +    D  +   V CG   + IV+  G L   G+     
Sbjct: 480 GDNGR--LGLDTTESHKSPQPVI-IPDPYQARSVHCGVDCSIIVTVDGTLLVCGNNRHNK 536

Query: 401 LGHGNLQNVSQPKEV-----------ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           LG  +  N   P++V           E LR L +KSVA G  HTA + D           
Sbjct: 537 LGLDD--NGKTPRQVDEVHIFTSVVSEPLRQLHIKSVAIGTSHTAVVTD----------- 583

Query: 450 GGKLFTWGDADKGRLGH-VDGERKLLPTCV----TRLVDFDFVQASCGRMLTVGLTGLGK 504
            G+ +T+G    G+LGH V G+ + +   +    T+++D      +CG   TV +   G+
Sbjct: 584 KGECYTFGSNQFGQLGHGVVGQNRQMGKVLFPEGTKILD-----VACGDTYTVAIGSEGE 638

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
           V++ G A  G+LG  +  +     V+    E F+
Sbjct: 639 VFSWGKAARGRLGRSEETNHLPIQVDFGDDEPFI 672



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 451 GKLFTWGDADKGRLGHVDGE-RKLLPTCVTRLVD----FDFVQASCGRMLTVGLTGLGKV 505
           G+L  W  +  G    + G   + +PT V R ++          SCG + T  LT  G +
Sbjct: 363 GRLIIWEVSSVGNNTTLPGSVEQQIPTFVARFLEGQSGVTIKHVSCGDLFTACLTDRGIL 422

Query: 506 YTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
            T GS  +G LG+    D S   +VE  L  E +  +S G+ HV  +T+   V++WG+  
Sbjct: 423 MTYGSGANGCLGHGTFHDVSQAKIVEELLGFEVIL-VSCGTSHVIAITNDHEVFSWGRGD 481

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
           NG+LGL  ++  ++P  V      Q  SV CG   +  + +  ++ V
Sbjct: 482 NGRLGLDTTESHKSPQPVIIPDPYQARSVHCGVDCSIIVTVDGTLLV 528


>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 445

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 204/446 (45%), Gaps = 49/446 (10%)

Query: 189 YADTRCPKNESHRLVT--PT-YGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNK 245
           ++ TR  +  S    T  PT Y SP I+   I   +  WG G   G +GG ++  +    
Sbjct: 15  FSSTRTTQRSSGGATTKVPTLYTSPDIDSDPITLQLFSWGRGA-SGQLGGGIE-EIRMYP 72

Query: 246 TQVDALLPK------LLESAVMLDVQN------ISLGAKHAALVTKEGEVFCWGEGKDGR 293
           + V  LL +      L ++   +D ++      IS G  H+ L T +G+++ WG+G  GR
Sbjct: 73  SPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISCGLFHSGL-TIDGDLWIWGKGDGGR 131

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LG      V  P L       +++ ++ G   + ALT  G+++TWG+   GA  +G +  
Sbjct: 132 LGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGA--LGHKVY 189

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--DGTFGVLGHGNLQ---- 407
               +PR +  + D  ++S +A    HTA ++ SG+L+ +G  +G   +           
Sbjct: 190 TRELVPRCVDGSWD-CKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEG 248

Query: 408 -NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
             +S P +V++L  + V SV+CG + T A+              G+L+ WG      LG 
Sbjct: 249 GGLSVPSKVKALT-VPVASVSCGGFFTMALTKE-----------GQLWNWGANSNYELGR 296

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
            D      P  V  L      Q +CG   ++ LT  GKV + G   HGQLGN   +++ I
Sbjct: 297 GDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSLRNQKI 356

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL-GDSQERETPTFVEAL 585
                 L ++ +  I+ G    A +T GG ++ WG   + QLG+ G  + + TP  V  L
Sbjct: 357 PTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFL 416

Query: 586 RD------RQVESVVCGSSITAAICL 605
            +       +V SV  G+S   A+CL
Sbjct: 417 TEEDERQPHKVISVSIGAS--HALCL 440


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S+    A +V++  EV+ WG     +L       +  PKL    S  + Q++  G++ T 
Sbjct: 359 SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTF 416

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVST 386
            ++  G +   G  ++G   +G+  ++S  L +  F+    ++ VS     + HT   +T
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTT 475

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            G++F++GDG +G LGHGN      PK ++  L+G  V  V+ G  H+AA+ +       
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------- 528

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK- 504
                G+L+TWG+ D GRLGH D   + +PT V  + +    + SCG   T+ L+  G+ 
Sbjct: 529 ----DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRT 582

Query: 505 VYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           V++ G   +G+LG    N   K + I  ++G     F++ + +GS     LTS G VY W
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGM----FIRKVCAGSQSSLALTSTGQVYAW 638

Query: 561 GKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           G  A   LG G S+     P  +E L   ++  +  G S   ++     +     +S  Q
Sbjct: 639 GCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQ 696

Query: 620 C 620
           C
Sbjct: 697 C 697



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 29/365 (7%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           TQ   L PKL  S    D Q I  G     +++ +G V   G+G  GRLG   + + S  
Sbjct: 389 TQEKILQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTL 446

Query: 306 KLVECLSGINVQSVSCG---EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           K +      +++ VS     +  T A T  GE+++WG  ++G   +G   S +   P+ +
Sbjct: 447 KKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGK--LGHGNSSTQKYPKLI 504

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L G  V  V+ G  H+A V+  G+L+T+G+G FG LGHG+  + + P  V+ +    
Sbjct: 505 QGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           V  V+CG  HT A+          +  G  ++++G  D G+LGH D  R   P  +  L 
Sbjct: 563 VGEVSCGSSHTIAL----------SKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQ 612

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----V 538
                +   G   ++ LT  G+VY  G       G+ +A     T +  KL EE     +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA-----TALRPKLIEELAATRI 667

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGS 597
             IS G  H   L+    VY WG N+ GQ G G+S    T P  V  L    ++ +  G+
Sbjct: 668 VDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGT 727

Query: 598 SITAA 602
           S + A
Sbjct: 728 SHSLA 732



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 32/289 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQN-ISLGAKHAALVT 278
           +V  WG+G    D G    G+ S  K       PKL++  +   V   +S G +H+A VT
Sbjct: 478 EVFSWGDG----DYGKLGHGNSSTQK------YPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE-IYT 337
           ++GE++ WGEG  GRLGH  +   + P LV+ +S  NV  VSCG   T AL+K G  +++
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWS 585

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G  ++G   +G   +   + P K+ + L G+ + KV  G   +  ++++GQ++ +G G 
Sbjct: 586 FGGGDNGK--LGHGDTNRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG- 641

Query: 398 FGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
              LG G+ +  + +PK +E L   ++  ++ G  H           C S +   +++ W
Sbjct: 642 -ACLGCGSSEATALRPKLIEELAATRIVDISIGDSH-----------CLSLSHDNEVYAW 689

Query: 457 GDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           G+   G+ G  +    +  P  V+ L      Q S G   ++  T L +
Sbjct: 690 GNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 20/227 (8%)

Query: 220 DVMIWGEGVLGGDIGGAVDG-SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           ++  WGEG    D G    G S S+N       +P L++   + +V  +S G+ H   ++
Sbjct: 531 ELYTWGEG----DFGRLGHGDSNSRN-------IPTLVKD--ISNVGEVSCGSSHTIALS 577

Query: 279 KEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K+G  V+ +G G +G+LGH     V  PK++E L G+ ++ V  G   + ALT +G++Y 
Sbjct: 578 KDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG    GA L G   S +  L  KL + L   R+  ++ G+ H   +S   +++ +G+ +
Sbjct: 638 WG---CGACL-GCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNS 693

Query: 398 FGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G GN    +++PK+V  L G+ ++ ++ G  H+ A   +  DR
Sbjct: 694 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDR 740


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  130 bits (326), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 48/314 (15%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           ++ IWG+G  GG +G        +N   V  L P L  +      + ++LG  H+  +T 
Sbjct: 126 NIWIWGKGD-GGRLGFG-----HENPVFVPTLNPNLDPA------KCVALGGVHSVALTS 173

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G+VF WG G  G LGH V      P+LV+ +S   ++ ++     T A+T++GE+YTWG
Sbjct: 174 LGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWG 233

Query: 340 HN--------------NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
            +              N G  L    + ++  +P           V+ V CG + TA+++
Sbjct: 234 RDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVP-----------VAAVFCGGFFTAVLT 282

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             GQ++ +G  +   LG GN     QPK + +L G++V  +A G +H+ A+ D       
Sbjct: 283 EEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTD------- 335

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                GK+ +WG    G+LGH   + + +P  +  L D   V  +CG   +  +T  GK+
Sbjct: 336 ----EGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKL 391

Query: 506 YTMGSAVHGQLGNP 519
           Y  G+A   QLG P
Sbjct: 392 YMWGNAKDSQLGVP 405



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 34/353 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G  H+AL+  +G ++ WG+G  GRLG      V  P L   L     + V+ G   +
Sbjct: 112 ISCGLFHSALLV-DGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLD--PAKCVALGGVHS 168

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            ALT  G+++TWG+   GA  +G        LPR L   +   ++  +A    HTA ++ 
Sbjct: 169 VALTSLGQVFTWGYGGFGA--LGHCVYHRELLPR-LVQGISNEKIRHIATSGTHTAAITE 225

Query: 387 SGQLFTYG--DGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           +G+++T+G  +G   +             +S P +V++L  + V +V CG + TA + + 
Sbjct: 226 TGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT-VPVAAVFCGGFFTAVLTE- 283

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                      G+++ WG      LG  +      P  +  L     +Q + G   ++ L
Sbjct: 284 ----------EGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLAL 333

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           T  GKV + G   HGQLG+P  +++ I +V   L ++ V  I+ G    A +T  G +Y 
Sbjct: 334 TDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYM 393

Query: 560 WGKNANGQLGL-GDSQERETPTFV------EALRDRQVESVVCGSSITAAICL 605
           WG   + QLG+ G  + +  P  V      + L   +V SV  G+S   A+CL
Sbjct: 394 WGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGAS--HAMCL 444



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 145/317 (45%), Gaps = 35/317 (11%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG F + AL   G I+ WG  + G   +G       ++P  L   LD  +   VA G 
Sbjct: 112 ISCGLFHS-ALLVDGNIWIWGKGDGGR--LGFGHENPVFVP-TLNPNLDPAKC--VALGG 165

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            H+  +++ GQ+FT+G G FG LGH        P+ V+ +   K++ +A    HTAAI +
Sbjct: 166 VHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITE 225

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHV--------DGERKLLPTCVTRLVDFDFVQAS 490
                       G+++TWG  D+G             +G    +P+ V  L         
Sbjct: 226 T-----------GEVYTWGR-DEGDGRLGLGPGRGPNEGGGLSIPSKVKALT-VPVAAVF 272

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSGSY 546
           CG   T  LT  G+++  G+  + +LG        + + I  +EG      V  I+SG Y
Sbjct: 273 CGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVR----VIQIASGGY 328

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLH 606
           H   LT  G V +WG   +GQLG    Q ++ P  ++AL D++V  + CG S +AAI   
Sbjct: 329 HSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDE 388

Query: 607 KSISVGDQSSCSQCRMP 623
             + +   +  SQ  +P
Sbjct: 389 GKLYMWGNAKDSQLGVP 405



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 30/144 (20%)

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
           D  +++++  +L +WG    G+LG    E +L P+ V  L                    
Sbjct: 38  DHNRNDSVTLQLLSWGRGSSGQLGGGIEETRLYPSPVANL------------------HA 79

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           L   +++ S   GQL     K+++ T+ +   +E    GIS G +H A+L  G +++ WG
Sbjct: 80  LPSSFSL-SPTPGQL---LIKNQNSTITK---QEAIEVGISCGLFHSALLVDG-NIWIWG 131

Query: 562 KNANGQLGLGDSQERETPTFVEAL 585
           K   G+LG G     E P FV  L
Sbjct: 132 KGDGGRLGFG----HENPVFVPTL 151


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 143/285 (50%), Gaps = 22/285 (7%)

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +G+ V  +  G     A T SGE++ WG N HG   VG R+  S   P ++ + L GV +
Sbjct: 71  AGVQVHQLLAG--SGGARTPSGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPL 126

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           ++++ GE H+  +S SG ++++G   FG LG G+ ++   P  +E L   KV+ VACG  
Sbjct: 127 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGS 186

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           H+A +              G LFT+G    G+LGH   + +L P  V  LV++   Q +C
Sbjct: 187 HSALLTQ-----------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIAC 235

Query: 492 GRMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
           GR  T+  ++ LGKV++ GS   GQLGN   +D+ + +       E +K  S  S    +
Sbjct: 236 GRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELI 295

Query: 551 LTSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           + +GG  S+  W K  N  + L    +R  PT  E    R +  V
Sbjct: 296 MIAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKRWIADV 336



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 14/216 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCG 322
           VQ   L A      T  GE+F WG+   G+LG        + P++VE L+G+ +  +S G
Sbjct: 73  VQVHQLLAGSGGARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 132

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  + AL+ SG IY+WG N  G   +G   S+ +     L + LD  +V  VACG  H+A
Sbjct: 133 EAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDY---PSLIEGLDNQKVEFVACGGSHSA 189

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++  G LFT+G G  G LGH + QN  +P  V  L   +V  +ACG WHT A V  +  
Sbjct: 190 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDL-- 247

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
                   GK+F++G    G+LG+     +L+P  V
Sbjct: 248 --------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 275



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 12/192 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+++E    + +  IS G  H+  ++  G ++ WG+ + G+LG         P L+E L 
Sbjct: 115 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLD 174

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V+ V+CG   +  LT+ G ++T+G   HG   +G   +++   P  L   L   RV+
Sbjct: 175 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ--LGHNSTQNELRP-CLVAELVEYRVT 231

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVACG 429
           ++ACG WHT A VS  G++F++G G  G LG+G    Q +  P +V S   LK++S    
Sbjct: 232 QIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLES---- 287

Query: 430 PWHTAAIVDIMV 441
             HT+    IM+
Sbjct: 288 --HTSEKELIMI 297



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           G+++  G  +HGQLG  +    + T  +VE  L    +  IS+G  H   L+  G++Y+W
Sbjct: 90  GELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPLAQISAGEAHSMALSMSGNIYSW 148

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GKN  GQLGLG ++ ++ P+ +E L +++VE V CG S +A +
Sbjct: 149 GKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 191



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 13/170 (7%)

Query: 451 GKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           G+LF WG    G+LG     RK      P  V  L      Q S G   ++ L+  G +Y
Sbjct: 90  GELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 507 TMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           + G    GQLG  + ++KD   +++EG L  + V+ ++ G  H A+LT  G ++T+G   
Sbjct: 147 SWGKNEFGQLGLGHTESKDYP-SLIEG-LDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 204

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC--LHKSISVG 612
           +GQLG   +Q    P  V  L + +V  + CG   T A    L K  S G
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFG 254


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 151/312 (48%), Gaps = 19/312 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           V NIS    HAA VT+ GEVF  G+      GH +V   +  P  ++ L GI+ + V+ G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T  LT  G++YT G N HG    G+   R+     +LF+ L    V +VA G  +T 
Sbjct: 217 LSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGL--APVVQVAAGASYTF 274

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDIM 440
            V+  G ++++G  T   LGHG+  +  +P+ ++S   R + V  V+ G  H  A+    
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL---- 330

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                 +A+G  ++TWG    G LGH D   K  P  ++ L     VQ    +  T  LT
Sbjct: 331 ------DALG-YVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLT 383

Query: 501 GLGKVYTMGSAVHGQLGNPK--AKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
             G V+  G    G LG P   + D+ +   V   L++ +V  IS+G YH   +T+ G V
Sbjct: 384 DEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIV 443

Query: 558 YTWGKNANGQLG 569
           + +G N   QLG
Sbjct: 444 FGFGDNERAQLG 455



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 151/345 (43%), Gaps = 23/345 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINVQSVSCGEF 324
           ++ G  H  LV  +  V+  G    G LGH  +    C     V   S   V ++S    
Sbjct: 108 VATGRYHTLLV-HDSSVYSCGSSLCGVLGHGPDT-TQCAAFSRVPFPSLSRVVNISASHN 165

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
               +T+ GE++T G N+      GE   R+ + P ++   L G+   +VA G   T I+
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEV-GRTIFRPTEI-KALKGISCKQVATGLSFTVIL 223

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDR 443
           +T GQ++T G  T G LGHG+  + + PK VE   GL  V  VA G  +T A+ D     
Sbjct: 224 TTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD----- 278

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRMLTVGLTG 501
                  G ++++G      LGH D   +L P  +      +   V+ S G    V L  
Sbjct: 279 ------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDA 332

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           LG VYT G    G LG+    D++   +   LK +    + +      VLT  GSV+ +G
Sbjct: 333 LGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFG 392

Query: 562 KNANGQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               G LG    G S +   P  +++LRD  V  +  G   T A+
Sbjct: 393 WMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 22/300 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +++   +  + ++ G     ++T +G+V+  G    G+LGH   +D + PK+VE   
Sbjct: 199 PTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFE 258

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
           G+  V  V+ G   T A+T  G +Y++G   +    +G         PR +  F   + +
Sbjct: 259 GLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFC--LGHGDQHDELRPRAIQSFKRRN-I 315

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V +V+ G+ H   +   G ++T+G G  G LGHG+  + + P+ + SL+      V   
Sbjct: 316 HVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCAR 375

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
              T  + D            G +F +G    G LG  D    ++ + P  +  L D   
Sbjct: 376 KRKTFVLTD-----------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYV 424

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSG 544
            Q S G   TV +T  G V+  G     QLG    +   +   ++  K  EE V    SG
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIAAPSG 484



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 23/240 (9%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +VA G +HT +V  S  +++ G    GVLGHG +    +    V      +V +++    
Sbjct: 107 QVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
           H A + ++           G++FT GD      GH +  R +  PT +  L      Q +
Sbjct: 166 HAAFVTEL-----------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVA 214

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-----VKGISSGS 545
            G   TV LT  G+VYT GS  HGQLG+    DR+      K+ E F     V  +++G+
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATP----KIVELFEGLAPVVQVAAGA 270

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            +   +T  G+VY++G   N  LG GD  +   P  +++ + R +  V   +    A+ L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+ ++S     + V  +S G +HA  +   G V+ WG G  G LGH    D + 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L       V   + +T  LT  G ++ +G    G+    +R S    +  ++ D
Sbjct: 358 PELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLD 417

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L    VS+++ G +HT  V+  G +F +GD     LG   ++   +P E+
Sbjct: 418 SLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI 468


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 164/354 (46%), Gaps = 24/354 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L P+ L  +V   V +I+ G      V   G V   G+G  GRLG+  +   S P L+E 
Sbjct: 152 LYPRNL--SVYGKVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEF 209

Query: 311 LSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            + +     S G +  + A+ K+G+I+TWG  ++G   +G   S +   P KL + L   
Sbjct: 210 PAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYGK--LGHGDSTTQKSP-KLIEALASR 266

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            +    CG  H+A V  +G L+ +G+G +G LG G+    S P +V  +R  +   V CG
Sbjct: 267 VIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCG 324

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT  +          +  G  ++++G A+ G+LGH D  R+  P  +  L      Q 
Sbjct: 325 FNHTVVL----------STDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQI 374

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYH 547
           + G  ++  +T  G +Y  G      LGN  + +  +   VV G L    V  I+ G  H
Sbjct: 375 AAGTQISAAVTREGALYVWGFGPC--LGNGSSDETFMLPKVVRG-LSGRVVIDIAIGENH 431

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSIT 600
           V  LT  G V+TWG N NGQ G G      T P  V+ L    ++ V  G++ T
Sbjct: 432 VVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 141/284 (49%), Gaps = 21/284 (7%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H+  + K G+++ WG+G  G+LGH  +     PKL+E L+   +    CG   + A+  +
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-LF 391
           G +Y WG  ++G   +G+   RS  +P ++ D  +    S+V CG  HT ++ST G+ ++
Sbjct: 285 GHLYMWGEGDYGRLGLGDALQRS--VPVQVPDIRE---ASQVVCGFNHTVVLSTDGRTVW 339

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           ++G    G LGHG+     +PK +++L+GL +  +A G   +AA+              G
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR-----------EG 388

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            L+ WG       G  D E  +LP  V  L     +  + G    V LT  G V+T G+ 
Sbjct: 389 ALYVWGFGPCLGNGSSD-ETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNN 447

Query: 512 VHGQ--LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
            +GQ   G+  A   S  +V+G L    ++ +++G+ H  V ++
Sbjct: 448 QNGQCGTGSGMATYTSPQMVQG-LHGAGIQQVTAGTTHTFVWSA 490



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 32/331 (9%)

Query: 298 VNMDVSCPKLVECLSGINVQS----VSCGEFQT-CALTKSGEIYTWGHNNHGADLVGERR 352
           +NM  + PK+    S + + S     SC +  T    + + E++ WG N+    L     
Sbjct: 89  LNMVATKPKVTADQSALTILSSIAAASCNDGGTNGGPSFADEVFCWGSNSS-QQLTDATP 147

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                 PR L  ++ G +V  +  G++ T  V ++G +   G G++G LG+G   + S P
Sbjct: 148 EDKLLYPRNL--SVYG-KVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSP 204

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK---SNAIG--GKLFTWGDADKGRLGHV 467
             +E                 A +  I+  +     S AIG  G+++TWGD D G+LGH 
Sbjct: 205 ILIE---------------FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYGKLGHG 249

Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
           D   +  P  +  L     V A CG   +  +   G +Y  G   +G+LG   A  RS+ 
Sbjct: 250 DSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVP 309

Query: 528 VVEGKLKEEFVKGISSGSYHVAVL-TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
           V    ++E     +  G  H  VL T G +V+++G   NG+LG GD+  +  P  ++AL+
Sbjct: 310 VQVPDIRE--ASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQ 367

Query: 587 DRQVESVVCGSSITAAICLHKSISVGDQSSC 617
              +  +  G+ I+AA+    ++ V     C
Sbjct: 368 GLTITQIAAGTQISAAVTREGALYVWGFGPC 398


>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
 gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
          Length = 753

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 144/284 (50%), Gaps = 26/284 (9%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL---QNVSQPKEVESLRG--LKVKSVA 427
           +++CG+ HTA+VS SG ++T+G    G LGHG+L   +  S P  VE L    +KV SVA
Sbjct: 34  RLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVA 93

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HT A+       C+       +++WG ++ G+LG  D ++   P  VT L D   +
Sbjct: 94  CGIEHTLAL-------CRDG-----VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCI 141

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
              CG   ++ L+   +VY+ G  VHGQLG    +D  +      L   FV  +++G  H
Sbjct: 142 AVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSH 201

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
            AVLT+ G VYT+G    GQLGLG + ++  P  V+AL   ++  + CGS  T A+    
Sbjct: 202 TAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVS--- 258

Query: 608 SISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN 651
                +Q   +  R P  FR    +C N   H+ +    +++  
Sbjct: 259 ----SEQKLFNWGRSPHYFRFHMIHCGNW--HYLAVTEARQVFT 296



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 155/339 (45%), Gaps = 54/339 (15%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD---VSCPKLVECLSG--INVQSVSC 321
           +S G  H A+V+  G+V+ WG+   GRLGH   ++    S P  VE L    I V SV+C
Sbjct: 35  LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVAC 94

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   T AL + G +Y+WG + +G   +G+  ++ H  P  + +  D  +   V CG +H+
Sbjct: 95  GIEHTLALCRDG-VYSWGSSEYGQ--LGQGDTQQHTRPVYVTELSDK-KCIAVVCGHYHS 150

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             +S   Q++++G G  G LG  ++++   P  V SL G  V  +A G  HTA +     
Sbjct: 151 LALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVL----- 205

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD------------------ 483
                    GK++T+G    G+LG     ++ LP  V  L                    
Sbjct: 206 ------TTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSS 259

Query: 484 -------------FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI--TV 528
                        F F    CG    + +T   +V+T G   HGQLG+  + D  +  TV
Sbjct: 260 EQKLFNWGRSPHYFRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTV 319

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
           V+ KL E FV   S G+     + + G V+ WG++ +GQ
Sbjct: 320 VQ-KLNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQ 357



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 37/238 (15%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G  V G +  +  + DALLP  + S     V  ++ G  H A++T EG+V+ +G G  G+
Sbjct: 163 GWGVHGQLGLDSIE-DALLPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQ 221

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LG       + P+LV+ L    +  + CG F+T A++   +++ WG + H          
Sbjct: 222 LGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRSPH---------- 271

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQP 412
                           R   + CG WH   V+ + Q+FT+G    G LGH  ++ ++  P
Sbjct: 272 --------------YFRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFP 317

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
             V+ L    V + + G   + A+              G+++ WG +D G+  H   E
Sbjct: 318 TVVQKLNESFVATASVGAEFSVAM-----------DATGQVWVWGRSDSGQSLHSSSE 364



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 6/122 (4%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-----PKAKDRSITVVEGKLKEEFVKGI 541
           V+ SCG+  T  ++  G VYT G +  G+LG+      + K     V    +    V  +
Sbjct: 33  VRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSV 92

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           + G  H   L   G VY+WG +  GQLG GD+Q+   P +V  L D++  +VVCG   + 
Sbjct: 93  ACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSL 151

Query: 602 AI 603
           A+
Sbjct: 152 AL 153


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 157/378 (41%), Gaps = 26/378 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WGE           DG    N T +D+  P  +       V  +++G +H   +T  
Sbjct: 56  ILAWGEN----------DGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSA 105

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V  WG   +G+LG+      S P  V   +G    +V+ G   + ALT +G I  WG 
Sbjct: 106 GTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGD 165

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG-QLFTYGDGTFG 399
           N  G    G    RS  +   L     G  V+ +A G  H  +++++G  L T+G  T G
Sbjct: 166 NTFGQLGDGSTTDRSTPVAVSLP---AGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRG 222

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LG G       P  V    G+ V SVA G  H+      +V      A+      WG  
Sbjct: 223 QLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHS------LVLTSDDTAL-----AWGGN 271

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             G+LG+      L+P  V      +    + GR+ +  LT  G  +  G    GQLGN 
Sbjct: 272 SFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNG 331

Query: 520 KAKDRSITVVEGKLKEEFVKGISS-GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              D S  V      +  +  I+   S H   +TS G+   WG NANG+LG G + +R T
Sbjct: 332 STTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRST 391

Query: 579 PTFVEALRDRQVESVVCG 596
           P  V      +V ++  G
Sbjct: 392 PVAVSLPAGTRVAAIAAG 409



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 135/323 (41%), Gaps = 13/323 (4%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
           + AA       +  WGE   G+LG+   +D S P  V   +G  V +V+ G+    ALT 
Sbjct: 45  RSAATAVVSDTILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTS 104

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           +G +  WG N  G    G   S S  +   L     G R   VA G  H+  ++++G + 
Sbjct: 105 AGTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPT---GTRAVAVAAGADHSLALTSAGTIL 161

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            +GD TFG LG G+  + S P  V    G  V ++A G  H   +           + G 
Sbjct: 162 AWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVL----------TSTGP 211

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            L TWG   +G+LG      +  P  VT          + GR  ++ LT        G  
Sbjct: 212 TLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGN 271

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLGN    D  + +            I++G  H A LTS G+ + WG N  GQLG G
Sbjct: 272 SFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNG 331

Query: 572 DSQERETPTFVEALRDRQVESVV 594
            + +   P  V    D ++ ++ 
Sbjct: 332 STTDSSEPVAVSLPADTRLTAIA 354


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 4/187 (2%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LPK+++S     +  IS G  H+  +T  GE++ WG   DG+LG  +  +    P L++ 
Sbjct: 125 LPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKS 184

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L GI +  ++CG   + AL+KSG IY WG N +G   + +  ++ H  P +L  TL  +R
Sbjct: 185 LLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH--PTQL-KTLRSIR 241

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +ACGE  +A +S  G +FT G G +G LGHG+  N   P+++  L G  V  V+CG 
Sbjct: 242 VKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGK 301

Query: 431 WHTAAIV 437
            HT A+V
Sbjct: 302 RHTLALV 308



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 136/272 (50%), Gaps = 20/272 (7%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLP-RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           +Y WG   HG   +G       + P    F       VS+V  GE HT +++ SG++F+ 
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKY--ASNVSQVTMGENHTVMLTKSGEVFSC 58

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G+     LGH   +  ++P++VE L   ++  ++CG  HT A  +            G+L
Sbjct: 59  GNNDLDQLGHK--KQRTKPEKVEGLDFYRITKISCGGNHTLAFNE-----------WGQL 105

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F WG    G+LG  +G  + LP  +  L  F  VQ SCG+  ++ LT  G++Y+ G    
Sbjct: 106 FGWGSDSHGQLG-FNGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYD 164

Query: 514 GQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           GQLG       ++  T+++  L    +  I+ GS H   L+  G++Y WGKN  GQLGL 
Sbjct: 165 GQLGLGMRSEYEKQPTLIKSLLGIP-IAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLN 223

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           D + +  PT ++ LR  +V+ + CG   +A +
Sbjct: 224 DEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 151/300 (50%), Gaps = 19/300 (6%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V  +++G  H  ++TK GEVF  G     +LGHK     + P+ VE L    +  +SCG
Sbjct: 35  NVSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQR--TKPEKVEGLDFYRITKISCG 92

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T A  + G+++ WG ++HG   +G     +  LP K+  +L    + +++CG+ H+ 
Sbjct: 93  GNHTLAFNEWGQLFGWGSDSHGQ--LG-FNGTTQPLP-KIIKSLATFHIVQISCGKNHSL 148

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++ +G+L+++G    G LG G       QP  ++SL G+ +  +ACG  H+ A+     
Sbjct: 149 ALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFAL----- 203

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
              KS AI G    WG    G+LG  D E KL PT +  L        +CG   +  L+ 
Sbjct: 204 --SKSGAIYG----WGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSA 257

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTW 560
            G V+T G+ ++GQLG+    +  +     +L    V  +S G  H +A++ S G VY++
Sbjct: 258 DGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 22/326 (6%)

Query: 283 VFCWGEGKDGRLG-HKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG    G LG   +  D +  P         NV  V+ GE  T  LTKSGE+++ G+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+   D +G ++ R+   P K+ + LD  R++K++CG  HT   +  GQLF +G  + G 
Sbjct: 61  ND--LDQLGHKKQRTK--PEKV-EGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQ 115

Query: 401 LG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG +G  Q +  PK ++SL    +  ++CG  H+ A+ +            G+L++WG  
Sbjct: 116 LGFNGTTQPL--PKIIKSLATFHIVQISCGKNHSLALTN-----------NGELYSWGGN 162

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG  +  E +  PT +  L+       +CG   +  L+  G +Y  G   +GQLG 
Sbjct: 163 YDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGL 222

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              +++        L+   VK I+ G    A L++ G V+T G    GQLG G +     
Sbjct: 223 NDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL 282

Query: 579 PTFVEALRDRQVESVVCGSSITAAIC 604
           P  +  L    V  V CG   T A+ 
Sbjct: 283 PRKIMELMGSTVTQVSCGKRHTLALV 308



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 131/257 (50%), Gaps = 15/257 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ +E      +  IS G  H     + G++F WG    G+LG         PK+++ L+
Sbjct: 75  PEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQ-PLPKIIKSLA 133

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             ++  +SCG+  + ALT +GE+Y+WG N  G   +G  RS     P  L  +L G+ ++
Sbjct: 134 TFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG-MRSEYEKQP-TLIKSLLGIPIA 191

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            +ACG  H+  +S SG ++ +G  T+G LG  + +N   P ++++LR ++VK +ACG   
Sbjct: 192 FIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDF 251

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           +A +           +  G +FT G    G+LGH     ++LP  +  L+     Q SCG
Sbjct: 252 SAFL-----------SADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCG 300

Query: 493 RMLTVGLT-GLGKVYTM 508
           +  T+ L    G+VY+ 
Sbjct: 301 KRHTLALVPSRGRVYSF 317



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 18/228 (7%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           GG  DG +           P L++S + + +  I+ G+ H+  ++K G ++ WG+   G+
Sbjct: 160 GGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQ 219

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LG     +   P  ++ L  I V+ ++CGE  +  L+  G ++T G   +G   +G   +
Sbjct: 220 LGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQ--LGHGST 277

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            +  LPRK+ + L G  V++V+CG+ HT A+V + G+++++G G  G LG     N S P
Sbjct: 278 SNEILPRKIME-LMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRVKTNCSTP 336

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS--NAIGGKLFTWGD 458
           +            V  GPW + + V ++ D+ K+  N +   +F+ G+
Sbjct: 337 Q------------VVLGPWVSPSGVPVITDKKKTSENVLVTHIFSGGN 372


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECL 311
           P+ + +     V  +S G  H+  +T  G++F WG    G+LGH ++M     P++++ +
Sbjct: 80  PQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSI 139

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK-LFDTLDGVR 370
           +   V  +SCG     ALT SGE++ WG N +G   +G    +   +P   L  +L G+ 
Sbjct: 140 ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKK---VPTATLVKSLAGIP 196

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           ++ +ACG  H+  VS SG +F +G  TFG LG  +L +   P ++++LR L V+ ++CG 
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGD 256

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
                  D  V   +     G +FT G    G+LGH     ++LP  V  L+     Q +
Sbjct: 257 -------DFSVFLTQE----GGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIA 305

Query: 491 CGRMLTVGLT-GLGKVY 506
           CGR  T+      GKVY
Sbjct: 306 CGRKHTLAFVPSRGKVY 322



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 16/312 (5%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV-NMDVSCPKLV 308
            + P+ ++ +   +VQ  + G  H  L+TK+G+++  G    G+LGH   N+    P+ +
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFI 83

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L    V  VSCG   + ALT  G++++WG N  G   +G       +   ++  ++  
Sbjct: 84  SALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ--LGHDLDMVSYPAPRMIKSIAT 141

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVA 427
             V +++CG  H   ++ SG+LF +G   +G LG G   + V     V+SL G+ +  +A
Sbjct: 142 KTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIA 201

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H+ A+        KS AI    F WG    G+LG  D + +  PT +  L      
Sbjct: 202 CGGNHSFAV-------SKSGAI----FGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR 250

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             SCG   +V LT  G V+T G    GQLG+    +  +  +  +L    +  I+ G  H
Sbjct: 251 YISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKH 310

Query: 548 -VAVLTSGGSVY 558
            +A + S G VY
Sbjct: 311 TLAFVPSRGKVY 322



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 143/328 (43%), Gaps = 23/328 (7%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG    G LG        V  P+ ++     NVQ  +CG   T  LTK G++YT G+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 341 NNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N+HG   +G   +    LP K       L+   V++V+CG  H+  ++  GQLF++G   
Sbjct: 63  NDHGQ--LGHDTNN---LPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117

Query: 398 FGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LGH  ++ +   P+ ++S+    V  ++CG  H  A+ +            G+LF W
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN-----------SGELFAW 166

Query: 457 GDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G  + G+LG    G++    T V  L        +CG   +  ++  G ++  G    GQ
Sbjct: 167 GANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQ 226

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG      R        L+   V+ IS G      LT  G V+T G    GQLG G    
Sbjct: 227 LGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGN 286

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAI 603
              P  V  L   ++  + CG   T A 
Sbjct: 287 EILPRMVFELMGSKITQIACGRKHTLAF 314



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 4/205 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +  +   V    P++++S     V  IS G  H   +T  GE+F WG  + G+
Sbjct: 114 GSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQ 173

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG       V    LV+ L+GI +  ++CG   + A++KSG I+ WG N  G   + +  
Sbjct: 174 LGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD 233

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           SR +  P +L  TL  + V  ++CG+  +  ++  G +FT G GTFG LGHG   N   P
Sbjct: 234 SRCY--PTQL-KTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILP 290

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + V  L G K+  +ACG  HT A V
Sbjct: 291 RMVFELMGSKITQIACGRKHTLAFV 315


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 164/364 (45%), Gaps = 42/364 (11%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--------- 314
            V  I+ G +H AL+T +  ++ +G G+ GRLGH    D + P  V   + +         
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 315  NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
             V  VSCG   T  +T +G++Y +G    G    GE  + S   P +    +D   ++ V
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGE--TGSSLYPSR----VDLRNIAAV 1359

Query: 375  ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
            ACG  HT  +++ G++F +G G  G LG+G+  +   P  VE L    + ++A G  H+ 
Sbjct: 1360 ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSC 1419

Query: 435  AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV----------TRLVDF 484
            A+           +  G++ TWG    G LGH   +  L+PT V          T + D 
Sbjct: 1420 AL-----------SRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDI 1468

Query: 485  DFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK----LKEEFVK 539
              V + +CG   T+  T  G +Y  G A  GQLG      + + V+  K         ++
Sbjct: 1469 SVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIR 1528

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            GI+ G++  AV ++ G ++ WG  A G     D ++      V  L + +   + CG+  
Sbjct: 1529 GIACGTFTSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAYH 1587

Query: 600  TAAI 603
              AI
Sbjct: 1588 AVAI 1591



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 136/292 (46%), Gaps = 45/292 (15%)

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WGE    G +G    GS S   ++VD           + ++  ++ G +H   +T +G V
Sbjct: 1331 WGEA---GRLGTGETGS-SLYPSRVD-----------LRNIAAVACGREHTLALTSKGRV 1375

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            F +G G  GRLG+    D   P LVE L   ++ +++ GE  +CAL++ GE+ TWG  + 
Sbjct: 1376 FAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGEVLTWGFGSS 1435

Query: 344  GADLVGERRSRSHWLPRKLFD---------TL--DGVRVSKVACGEWHTAIVSTSGQLFT 392
            GA   G   +R + L   L D         TL  D   V+ VACG +HT   +  G L+ 
Sbjct: 1436 GALGHG---TRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATNDGVLYG 1492

Query: 393  YGDGTFGVLG--HGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            +GD   G LG  H + Q+  V  PKE+       ++ +ACG + +A         C +  
Sbjct: 1493 WGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGTFTSAV--------CSTQ- 1543

Query: 449  IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
              G+LF WG    G    +D E   +   V  L +F+F Q +CG    V +T
Sbjct: 1544 --GQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAYHAVAIT 1592



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 114/254 (44%), Gaps = 36/254 (14%)

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-------- 421
            RV ++ACG  HTA+++    L+T+G G  G LGHG  ++ + P  V     L        
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304

Query: 422  -KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
              V  V+CG  HT  +              G L+ +G  + GRLG  +    L P+    
Sbjct: 1305 GGVVDVSCGREHTMVVTG-----------NGDLYGFGWGEAGRLGTGETGSSLYPS---- 1349

Query: 481  LVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
             VD   + A +CGR  T+ LT  G+V+  G+   G+LGN    D  +  +   L+E  + 
Sbjct: 1350 RVDLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIV 1409

Query: 540  GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA----------LRDRQ 589
             I++G  H   L+  G V TWG  ++G LG G       PT V+           + D  
Sbjct: 1410 AIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDIS 1469

Query: 590  -VESVVCGSSITAA 602
             V SV CGS  T A
Sbjct: 1470 VVTSVACGSYHTLA 1483


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECL 311
           P+ + +     V  +S G  H+  +T  G++F WG    G+LGH ++M     P++++ +
Sbjct: 80  PQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSI 139

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK-LFDTLDGVR 370
           +   V  +SCG     ALT SGE++ WG N +G   +G    +   +P   L  +L G+ 
Sbjct: 140 ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKK---VPTATLVKSLAGIP 196

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           ++ +ACG  H+  VS SG +F +G  TFG LG  +L +   P ++++LR L V+ ++CG 
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGD 256

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
                  D  V   +     G +FT G    G+LGH     ++LP  V  L+     Q +
Sbjct: 257 -------DFSVFLTQE----GGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIA 305

Query: 491 CGRMLTVGLT-GLGKVY 506
           CGR  T+      GKVY
Sbjct: 306 CGRKHTLAFVPSRGKVY 322



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 16/312 (5%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV-NMDVSCPKLV 308
            + P+ ++ +   +VQ  + G  H  L+TK+G+++  G    G+LGH   N+    P+ +
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFI 83

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L    V  VSCG   + ALT  G++++WG N  G   +G       +   ++  ++  
Sbjct: 84  SALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ--LGHDLDMVSYPAPRMIKSIAT 141

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVA 427
             V +++CG  H   ++ SG+LF +G   +G LG G   + V     V+SL G+ +  +A
Sbjct: 142 KTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIA 201

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H+ A+        KS AI    F WG    G+LG  D + +  PT +  L      
Sbjct: 202 CGGNHSFAV-------SKSGAI----FGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVR 250

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             SCG   +V LT  G V+T G    GQLG+    +  +  +  +L    +  I+ G  H
Sbjct: 251 YISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKH 310

Query: 548 -VAVLTSGGSVY 558
            +A + S G VY
Sbjct: 311 TLAFVPSRGKVY 322



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 143/328 (43%), Gaps = 23/328 (7%)

Query: 283 VFCWGEGKDGRLGHK--VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           ++CWG    G LG        V  P+ ++     NVQ  +CG   T  LTK G++YT G+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 341 NNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N+HG   +G   +    LP K       L+   V++V+CG  H+  ++  GQLF++G   
Sbjct: 63  NDHGQ--LGHDTNN---LPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117

Query: 398 FGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
            G LGH  ++ +   P+ ++S+    V  ++CG  H  A+ +            G+LF W
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN-----------SGELFAW 166

Query: 457 GDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G  + G+LG    G++    T V  L        +CG   +  ++  G ++  G    GQ
Sbjct: 167 GANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQ 226

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE 575
           LG      R        L+   V+ IS G      LT  G V+T G    GQLG G    
Sbjct: 227 LGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGN 286

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAI 603
              P  V  L   ++  + CG   T A 
Sbjct: 287 EILPRMVFELMGSKITQIACGRKHTLAF 314



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 4/205 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +  +   V    P++++S     V  IS G  H   +T  GE+F WG  + G+
Sbjct: 114 GSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQ 173

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG       V    LV+ L+GI +  ++CG   + A++KSG I+ WG N  G   + +  
Sbjct: 174 LGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD 233

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           SR +  P +L  TL  + V  ++CG+  +  ++  G +FT G GTFG LGHG   N   P
Sbjct: 234 SRCY--PTQL-KTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILP 290

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + V  L G K+  +ACG  HT A V
Sbjct: 291 RMVFELMGSKITQIACGRKHTLAFV 315


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 40/316 (12%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRKLF 363
           +E  + I ++ V+ G      +     +YTWG  + G     DL+G  +        ++ 
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKP-------EMV 687

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
           + L G  + +  CG+  +  VS +G + T GDG+ G LGHG+  + S+P+ +E L  + V
Sbjct: 688 EALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDV 747

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
           ++++CGP H  A+              G++F WG    G LG  D E    P  V     
Sbjct: 748 RAISCGPHHVVAV-----------GSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEP 796

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----------------NPKAKDRSIT 527
               +  CG   T+ LT +G V   G+  + +LG                  +   R + 
Sbjct: 797 VFIREVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVP 856

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE--AL 585
            V   L       ++ G +H +VL   G VYT+G+N  GQLG G ++ R+ P  V+  ++
Sbjct: 857 TVVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSI 916

Query: 586 RDRQVESVVCGSSITA 601
            D+ V  + CG   TA
Sbjct: 917 SDKTVTMLACGDMFTA 932



 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 11/314 (3%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
           +E    + ++ +++G +H  +V  E  V+ WGEG  G+LGH   +  S P++VE L G +
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKS 694

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           +    CG+  +  ++ +G + T G  ++G    G+  S S   PR L + L  V V  ++
Sbjct: 695 IVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASR--PR-LIEPLLSVDVRAIS 751

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   V + G++F +G G  G LG G+ ++   P+EV+    + ++ V CG   T  
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDGTMF 811

Query: 436 IVDIMVDRCKSNAIGGKLFT-----WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
           + D+       N    KL       +  A K  L  V+   + +PT V  L +   +  +
Sbjct: 812 LTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMA 871

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQL--GNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            G   T  L   GKVYT G  + GQL  G+ K +D  + V +  + ++ V  ++ G    
Sbjct: 872 VGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFT 931

Query: 549 AV-LTSGGSVYTWG 561
           AV + S  +++ WG
Sbjct: 932 AVGINSENALFFWG 945



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 135/315 (42%), Gaps = 51/315 (16%)

Query: 219 KDVMIWGEGVLG----GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA 274
           + V  WGEG  G    GD+ G                 P+++E+     +     G   +
Sbjct: 660 RAVYTWGEGSKGQLGHGDLLGRSK--------------PEMVEALKGKSIVRACCGDGFS 705

Query: 275 ALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
             V+  G V   G+G +G LGH   M  S P+L+E L  ++V+++SCG     A+   GE
Sbjct: 706 VFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAVGSDGE 765

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           ++ WG   HG   +G+     H+ P+++    + V + +V CG   T  ++  G +   G
Sbjct: 766 VFAWGRGKHGCLGLGDE--EDHFSPQEV-QISEPVFIREVKCGVDGTMFLTDMGSVLACG 822

Query: 395 DGTFGVLGHGN-------LQNVSQ---------PKEVESLRGLKVKSVACGPWHTAAIVD 438
           +     LG  +       ++N+ Q         P  V +L   +   +A GP HT+ +V+
Sbjct: 823 NNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVLVE 882

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLT 496
                       GK++T+G   +G+LG    + +  P  V  L   D      +CG M T
Sbjct: 883 -----------PGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFT 931

Query: 497 -VGLTGLGKVYTMGS 510
            VG+     ++  G+
Sbjct: 932 AVGINSENALFFWGT 946



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           ++ ++ G  H+ V+    +VYTWG+ + GQLG GD   R  P  VEAL+ + +    CG 
Sbjct: 643 IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRACCGD 702

Query: 598 SITAAI 603
             +  +
Sbjct: 703 GFSVFV 708



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 62/170 (36%), Gaps = 20/170 (11%)

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGL------GKVYTMGSAVHGQLGNPKAKDRSIT 527
           L TC   L   +       R + VGL  +        VYT G    GQLG+     RS  
Sbjct: 625 LDTCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKP 684

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            +   LK + +     G      ++  G V T G  +NG LG GD      P  +E L  
Sbjct: 685 EMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLS 744

Query: 588 RQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCG 637
             V ++ CG         H  ++VG           F + R KH C   G
Sbjct: 745 VDVRAISCGP--------HHVVAVGSDGEV------FAWGRGKHGCLGLG 780


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 17/323 (5%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H+  + ++GEV+  G    G+LGH+   +   P+ +  L+  ++  V+CGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK--PEQIGALADQHIIHVACGE 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL+  G++++WG  + G   +G   +       +L   L+   + +V+CG WH   
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQ--LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  GQ FT+G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                ++ G +F WG  + G+LG  D + +  P  V  L     V  SCG   T  LT  
Sbjct: 206 -----SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           G V+T G+   GQLG+    D        +L    V  I+ G  H +A + S G +Y +G
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 562 KNANGQLGLGDSQERETPTFVEA 584
             A GQLG G +   + P+ V+ 
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKG 343



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 15/267 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECL 311
           P+ + +     + +++ G  H+  ++  G++F WG G DG+LG     D V+ P+L++ L
Sbjct: 75  PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +   +  VSCG +   AL   G+ +TWG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 135 NQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIPL 192

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           ++VA G  H+  +S SG +F +G    G LG  + ++   P  V+ LR  KV  ++CG  
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HTA +              G +FT+G    G+LGH     ++ P  V  L+  +  Q +C
Sbjct: 253 HTAVLTK-----------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIAC 301

Query: 492 GRMLTVGLT-GLGKVYTMGSAVHGQLG 517
           GR  T+      G +Y  G    GQLG
Sbjct: 302 GRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 148/325 (45%), Gaps = 20/325 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           + CWG    G+ G   N+   V+ P++   +S  +V+ V+CG   +  L + GE+YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N  G  L  ER       P ++    D   +  VACGE H+  +S  GQLF++G G+ G 
Sbjct: 61  NTKG-QLGHEREGNK---PEQIGALAD-QHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 401 LGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
           LG    ++ V+ P+ ++ L    +  V+CG WH           C + A  G+ FTWG  
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH-----------CLALAADGQFFTWGKN 164

Query: 460 DKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
             G+LG   +   +  P  V  L      Q + G   +  L+  G V+  G    GQLG 
Sbjct: 165 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
              KDR        L+ + V  IS G  H AVLT  G V+T+G  + GQLG     +   
Sbjct: 225 SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN 284

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  V  L   +V  + CG   T A 
Sbjct: 285 PRRVLELMGSEVTQIACGRQHTLAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 23/255 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +VACG  H+  +   G+++T G  T G LGH    N  +P+++ +L    +  VACG 
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQA 489
            H+ A+ D            G+LF+WG    G+LG +  E  + +P  + +L     +Q 
Sbjct: 94  SHSLALSDR-----------GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 142

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKGISSG 544
           SCG    + L   G+ +T G   HGQLG  K     A  + +  +EG    +    +++G
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ----VAAG 198

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             H   L+  G+V+ WG N  GQLGL D ++RE+P  V+ LR ++V  + CG   TA + 
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 605 LHKSISVGDQSSCSQ 619
               +      SC Q
Sbjct: 259 KSGGVFTFGAGSCGQ 273



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 14/233 (6%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +    T+    +P+L++      +  +S G  H   +  +G+ F WG+   G+
Sbjct: 109 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG ++ WG NN G   + + +
Sbjct: 169 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            R      KL  T    +V  ++CGE HTA+++ SG +FT+G G+ G LGH ++ +   P
Sbjct: 229 DRESPCHVKLLRT---QKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           + V  L G +V  +ACG  HT A V             G ++ +G   +G+LG
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSS----------GLIYAFGCGARGQLG 328


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 163/368 (44%), Gaps = 62/368 (16%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMD----VSCPKLVECLSGINVQS----VSCG 322
           A HA L    G V+ WG   DG+LG ++  D    V  P  +E  S +++ +    ++CG
Sbjct: 76  AAHAQLA---GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACG 132

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T  L   G++Y+ G N+ G   +G ++ RS   P ++ D L+   ++++ACGE H+ 
Sbjct: 133 RAHTLFLVD-GQVYSCGSNDQGQ--LGHKKHRSK--PERV-DALEPYTITQIACGETHSL 186

Query: 383 IVSTSGQLFTYGDGTFGVLG----------------------------------HGNLQN 408
            ++++GQ+F +GD     LG                                     +  
Sbjct: 187 ALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDF 246

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
           +++P+ V +L G K+  + CG    A    ++ +R       G +F WGD   G+L   +
Sbjct: 247 MTRPRLVRALTGHKIVQIVCG----ANFSLVLSER-------GDVFAWGDNTSGQLCLRE 295

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
            +   +PT V  L      Q + G   T+ LT  G+VY+ G+   GQLG       +I  
Sbjct: 296 LKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPS 355

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
               L+ +F   I+ G  H  VLT  G VY++G    GQLG G  Q    P  +  L  +
Sbjct: 356 RLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGK 415

Query: 589 QVESVVCG 596
               V+CG
Sbjct: 416 SASQVLCG 423



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 16/234 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+ +     +  I  GA  + ++++ G+VF WG+   G+L  +    V  P LV+ L 
Sbjct: 250 PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELY 309

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           GI ++ ++ G   T ALT +G++Y+WG+N  G   VG+  +  H +P +L  TL+    +
Sbjct: 310 GIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGD--TAPHTIPSRL-KTLEHQFCA 366

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            +ACGE H+ +++ +G ++++G G  G LGHG LQN   P+ +  L G     V CG  H
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRH 426

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH---VDGERKLLPTCVTRLVD 483
           T      +V   K+N    K++ +G    G+LG    V+ ++ +L   + R++D
Sbjct: 427 T------IVFFPKTN----KIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLD 470



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 158/373 (42%), Gaps = 60/373 (16%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I+ G  H  L   +G+V+  G    G+LGHK +   S P+ V+ L    +  ++CGE  +
Sbjct: 129 IACGRAHT-LFLVDGQVYSCGSNDQGQLGHKKHR--SKPERVDALEPYTITQIACGETHS 185

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-------------------------- 360
            ALT +G+++ WG N   A  +G   S S   P                           
Sbjct: 186 LALTSNGQVFAWGDNK--ASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAY 243

Query: 361 -------KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
                  +L   L G ++ ++ CG   + ++S  G +F +GD T G L    L+ V  P 
Sbjct: 244 MDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPT 303

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            V+ L G+ ++ +A G  HT A+              G++++WG+   G+LG  D     
Sbjct: 304 LVKELYGIPIRQLAAGGRHTLALT-----------FNGQVYSWGNNQFGQLGVGDTAPHT 352

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----RSITVV 529
           +P+ +  L        +CG   +V LT  G VY+ G+   GQLG+   ++    R I  +
Sbjct: 353 IPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFEL 412

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE----TPTFVEAL 585
            GK   + + G     + +        +Y +G   NGQLG G   E +    TP  V  L
Sbjct: 413 MGKSASQVLCG---RRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVL 469

Query: 586 RDRQVESVVCGSS 598
               +  +  G+S
Sbjct: 470 DATPILRIATGAS 482



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           +P L++    + ++ ++ G +H   +T  G+V+ WG  + G+LG       + P  ++ L
Sbjct: 301 VPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTL 360

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
                  ++CGE  +  LT++G +Y++G    G   +G    ++   PR +F+ L G   
Sbjct: 361 EHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQ--LGHGTLQNEINPRMIFE-LMGKSA 417

Query: 372 SKVACGEWHTAI-VSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVKSV 426
           S+V CG  HT +    + +++ +G G  G LG G      Q+V  P  V  L    +  +
Sbjct: 418 SQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPILRI 477

Query: 427 ACG 429
           A G
Sbjct: 478 ATG 480


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  129 bits (323), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 96/285 (33%), Positives = 135/285 (47%), Gaps = 26/285 (9%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           GD+G   DGS        D  +P+L++     DV N++ GA H A VT +GE++  G  +
Sbjct: 8   GDMGQLGDGSTE------DVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
           + +LG +   D   P  V  L    VQ V+CG   T A+   G +  +G   +G   +G 
Sbjct: 62  ESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGP 121

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             +R   LPR + D L  + + +VA G  HT  +S++G +F+ G+G+FG LG G  +   
Sbjct: 122 CGARVE-LPRVVKD-LRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGND 179

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL------ 464
            P+ +  L  L V  +ACG  H+AAI              G++ TWG   K RL      
Sbjct: 180 VPRPISRLWPLGVVQIACGENHSAAI-----------TADGRVLTWGRG-KHRLLPAFHC 227

Query: 465 GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           GH D E    P  V  L      Q SCG   TV LT  G VY  G
Sbjct: 228 GHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score =  115 bits (289), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 90/286 (31%), Positives = 131/286 (45%), Gaps = 20/286 (6%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV+ +G G  G+LG     DV  P+LV+ L   +V +++ G   T A+T  GE+Y  G N
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
                 V   R RS  L       L+  +V +VACG  HT  V   G +  +G   +G +
Sbjct: 61  EESQLGV---RQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQV 117

Query: 402 GHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G G     V  P+ V+ LR + +  VA G  HT A+          ++ GG +F+ G+  
Sbjct: 118 GLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLAL----------SSTGG-VFSCGNGS 166

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---- 516
            G LG    E   +P  ++RL     VQ +CG   +  +T  G+V T G   H  L    
Sbjct: 167 FGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFH 226

Query: 517 -GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+   ++ S       LK    + +S G  H  +LT  GSVY WG
Sbjct: 227 CGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 29/268 (10%)

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +++ +G G  G LG G+ ++V  P+ V+ L+   V ++A G  HTAA+            
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTS---------- 50

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+L+  G  ++ +LG       L PT VT L  F   + +CG   T+ +   G V   
Sbjct: 51  -DGELYVMGSNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAF 109

Query: 509 GSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
           GSA +GQ+G  P      +  V   L+   +  +++G  H   L+S G V++ G  + G 
Sbjct: 110 GSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGA 169

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFR 627
           LG G ++  + P  +  L    V  + CG + +AAI     +                + 
Sbjct: 170 LGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRV--------------LTWG 215

Query: 628 RKKHN---CYNCGLHFCSACSTKKIINA 652
           R KH     ++CG      CST K + A
Sbjct: 216 RGKHRLLPAFHCGHGDFENCSTPKPVQA 243


>gi|224076411|ref|XP_002195043.1| PREDICTED: serine/threonine-protein kinase Nek8 [Taeniopygia
           guttata]
          Length = 698

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 146/339 (43%), Gaps = 42/339 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           ++ WG G        +   +  P L        V  VS G  Q   +TKSG +  W    
Sbjct: 320 IYTWGSG--------ITTPLRLPML-----NTEVVQVSAGRTQKAGVTKSGRLILWEAPP 366

Query: 343 HGA----DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            GA     L G           +  +   GV +  V+CG+  TA ++  G + T+G G+ 
Sbjct: 367 VGAAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSN 426

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LGHGN  +VSQPK VE+L G ++  VACG  H  A+ +   +R        ++F WG 
Sbjct: 427 GCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSN---ER--------EVFAWGR 475

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG- 517
            D GRLG    E    P  VT   + +  +  CG   ++ LT   ++   GS    +LG 
Sbjct: 476 GDNGRLGLGTLECHNCPQQVTVPPEHEAQRVICGIDSSMVLTVKNQILACGSNRCNKLGL 535

Query: 518 ---------NPKAKDRSITVV----EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
                    +P+ +    TV        L +E +     G+ H A +T+ G  YT+G N 
Sbjct: 536 DRISSAEEPSPEDQVEEATVFVCAQSAPLNQEPIVCADIGTAHSAAVTASGHCYTFGSNQ 595

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +GQLG    +    P  V  L   +V  V CG + T AI
Sbjct: 596 HGQLGTNSCRNSRVPHLVVGLETMKVTVVACGDAFTVAI 634



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 9/300 (3%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    +G   G ++ G+  Q + Q    + + LE    + ++++S G    A +T  
Sbjct: 359 LILWEAPPVGAAGGPSLPGATEQLQPQ---FVSRFLEGQSGVTIKHVSCGDLFTACLTDR 415

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DVS PK+VE L G  +  V+CG     A++   E++ WG 
Sbjct: 416 GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGR 475

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            ++G   +G      H  P+++    +     +V CG   + +++   Q+   G      
Sbjct: 476 GDNGR--LGLGTLECHNCPQQVTVPPEH-EAQRVICGIDSSMVLTVKNQILACGSNRCNK 532

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVA-CGPWHTAAIV--DIMVDRCKSNAIGGKLFTWG 457
           LG   + +  +P   + +    V   A   P +   IV  DI      +    G  +T+G
Sbjct: 533 LGLDRISSAEEPSPEDQVEEATVFVCAQSAPLNQEPIVCADIGTAHSAAVTASGHCYTFG 592

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG        +P  V  L        +CG   TV +   G+V T G    G+LG
Sbjct: 593 SNQHGQLGTNSCRNSRVPHLVVGLETMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLG 652



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 138/355 (38%), Gaps = 36/355 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-------CPKLVECLSGIN 315
           +V  +S G    A VTK G +  W     G  G       +         + +E  SG+ 
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLILWEAPPVGAAGGPSLPGATEQLQPQFVSRFLEGQSGVT 398

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ VSCG+  T  LT  G I T+G  ++G    G     S     K+ + L G  + +VA
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQ---PKIVEALLGYEMVQVA 455

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   VS   ++F +G G  G LG G L+  + P++V      + + V CG      
Sbjct: 456 CGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNCPQQVTVPPEHEAQRVICG------ 509

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--------------HVDGERKLLPTCVTRL 481
                +D      +  ++   G     +LG               V+     +      L
Sbjct: 510 -----IDSSMVLTVKNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFVCAQSAPL 564

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI 541
                V A  G   +  +T  G  YT GS  HGQLG    ++  +  +   L+   V  +
Sbjct: 565 NQEPIVCADIGTAHSAAVTASGHCYTFGSNQHGQLGTNSCRNSRVPHLVVGLETMKVTVV 624

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           + G      + + G V TWGK A G+LG  D +     P  +E      V SV C
Sbjct: 625 ACGDAFTVAIGADGEVCTWGKGARGRLGRRDEETGVPKPVQLEETHPYLVTSVAC 679



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 11/200 (5%)

Query: 430 PWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVD- 483
           P     +V +   R +   +   G+L  W     G  G         +L P  V+R ++ 
Sbjct: 334 PMLNTEVVQVSAGRTQKAGVTKSGRLILWEAPPVGAAGGPSLPGATEQLQPQFVSRFLEG 393

Query: 484 ---FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVK 539
                    SCG + T  LT  G + T GS  +G LG+    D S   +VE  L  E V+
Sbjct: 394 QSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ 453

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            ++ G+ HV  +++   V+ WG+  NG+LGLG  +    P  V    + + + V+CG   
Sbjct: 454 -VACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNCPQQVTVPPEHEAQRVICGIDS 512

Query: 600 TAAICLHKSISVGDQSSCSQ 619
           +  + +   I     + C++
Sbjct: 513 SMVLTVKNQILACGSNRCNK 532


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 146/315 (46%), Gaps = 28/315 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCG 322
           V ++S    HAA V + GEVF  G+      GH+     +  P+LVE L GI  + V+ G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAG 224

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T  LT+ G +YT G N HG    G+ + R      K+ + L    V ++A G  +  
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRP---TPKMIEVLS--SVVQIAAGPSYIL 279

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDIM 440
            V+ +G ++++G G    LGHG   +  QP+ ++  R  G+ +  V+ G  H  A+    
Sbjct: 280 SVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVAL---- 335

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                SN   G ++TWG    G LGH D   K  P  +T L +   VQ    +  T  L 
Sbjct: 336 ----DSN---GYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLV 388

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSIT------VVEGKLKEEFVKGISSGSYHVAVLTSG 554
             G VY  GS   G LG     DR ++       +   L+   V  IS+G YH  V+TS 
Sbjct: 389 DSGSVYGFGSMGFGSLG---FLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSR 445

Query: 555 GSVYTWGKNANGQLG 569
           G ++ +G N   QLG
Sbjct: 446 GQIFGFGDNERAQLG 460



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 137/291 (47%), Gaps = 21/291 (7%)

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           ++VE  SG N+Q ++ G++ T  ++ S  +Y+ G    G    G   ++     R  F  
Sbjct: 105 QMVETSSG-NMQ-ITTGKYHTLLISNS-SVYSCGSGLCGVLGQGSETTQCVAFTRIDFPP 161

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVK 424
           L   RV  V+    H A V  SG++FT GD +    GH +    + +P+ VESL+G+  K
Sbjct: 162 L--ARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCK 219

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            VA G   T  +              G ++T G    G+LGH D + +  P  +  L   
Sbjct: 220 QVAAGLNFTVFLTR-----------KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV 268

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGIS 542
             VQ + G    + +T  G VY+ GS  +  LG+ +  D  +   + + + K   +  +S
Sbjct: 269 --VQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVS 326

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           +G  H   L S G VYTWGK   G LG GD  E+ TP  + +L+++ V  V
Sbjct: 327 AGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 141/349 (40%), Gaps = 34/349 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-------VSCPKLVECLSGINVQSV 319
           I+ G  H  L++    V+  G G  G LG             +  P L        V  V
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLAR------VVHV 168

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           S        + +SGE++T G N+  +   G R +       +L ++L G+   +VA G  
Sbjct: 169 SASFNHAAFVMQSGEVFTCGDNS--SSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLN 226

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            T  ++  G ++T G  T G LGHG+ Q+   PK +E L    V  +A GP +  ++ + 
Sbjct: 227 FTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS--SVVQIAAGPSYILSVTE- 283

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTV 497
                      G ++++G      LGH +   +L P  + +        V+ S G    V
Sbjct: 284 ----------NGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAV 333

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            L   G VYT G    G LG+    +++   +   LK + V  + +      VL   GSV
Sbjct: 334 ALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSV 393

Query: 558 YTWGKNANGQLGLGD---SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           Y +G    G LG  D   S +   P  ++ LR   V  +  G   T  I
Sbjct: 394 YGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVI 442



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 21/271 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+ES   +  + ++ G      +T++G V+  G    G+LGH    D   PK++E LS
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS 266

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL-VGERRSRSHWLPRKLFDTL-DGVR 370
             +V  ++ G     ++T++G +Y++G    GA+  +G         PR +      G+ 
Sbjct: 267 --SVVQIAAGPSYILSVTENGTVYSFGS---GANFCLGHGEQHDELQPRAIQKFRRKGIH 321

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +V+ G+ H   + ++G ++T+G G  G LGHG+    + P+ + SL+   V  V    
Sbjct: 322 IVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARK 381

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFV 487
             T  +VD            G ++ +G    G LG +D     + L P  +  L      
Sbjct: 382 RKTFVLVD-----------SGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVS 430

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           Q S G   TV +T  G+++  G     QLG+
Sbjct: 431 QISTGLYHTVVITSRGQIFGFGDNERAQLGH 461



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+ ++      + +  +S G +HA  +   G V+ WG+G  G LGH   ++ + 
Sbjct: 303 QHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTT 362

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L    V  V   + +T  L  SG +Y +G    G+    +RR     L  ++ D
Sbjct: 363 PELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILD 422

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           TL    VS+++ G +HT ++++ GQ+F +GD     LGH  L++  +P E+
Sbjct: 423 TLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEI 473


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 21/308 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            ++++ G +H ALVT+ G +F +G    G+LG       + P  V+ L    V+ V+CG 
Sbjct: 38  AKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGR 97

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T   T+SG +YT+G N  G   +G     S   P K+    +  +   +A G  H+  
Sbjct: 98  IHTIVATESGCLYTFGANGDGQ--LGVEDIPSSNCPVKV--ECEPRQYKALAAGADHSVA 153

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++  G+L+ +G G+ G LG G++ + S P  + +    KV SVACG +HTA + D+    
Sbjct: 154 LTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDN--KVISVACGYYHTAFVTDV---- 207

Query: 444 CKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                  G++FT+G+ D G+LG   D  + + P  V   +       +CG   TV LT  
Sbjct: 208 -------GEVFTFGEGDGGKLGQGTDYGKAVAPKKVN--IPEKAKSVACGGSHTVVLTEC 258

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           GKVYT G   +GQLG+        T V    K +  + I++G  H A++T  G +YT+G 
Sbjct: 259 GKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKVTQ-IAAGENHTALVTEKGQLYTFGD 317

Query: 563 NANGQLGL 570
             + +LGL
Sbjct: 318 GRHAKLGL 325



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 20/260 (7%)

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           + G   +SV+CG+  T  +T+SG ++T+G N+ G   + E +  +     K    L   +
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVK---KLKPEK 89

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  VACG  HT + + SG L+T+G    G LG  ++ + + P +VE     + K++A G 
Sbjct: 90  VKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVE-CEPRQYKALAAGA 148

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            H+ A+ D            G+L+ WG   +G+LG  D + K  PT ++   D   +  +
Sbjct: 149 DHSVALTD-----------DGELYVWGGGSEGQLGLGDIDDKSTPTLLS--TDNKVISVA 195

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVA 549
           CG   T  +T +G+V+T G    G+LG  +  D    V   K+   E  K ++ G  H  
Sbjct: 196 CGYYHTAFVTDVGEVFTFGEGDGGKLG--QGTDYGKAVAPKKVNIPEKAKSVACGGSHTV 253

Query: 550 VLTSGGSVYTWGKNANGQLG 569
           VLT  G VYT+G+  NGQLG
Sbjct: 254 VLTECGKVYTFGEGGNGQLG 273



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 22/229 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQ 325
           ++ GA H+  +T +GE++ WG G +G+LG     D S P L   LS  N V SV+CG + 
Sbjct: 144 LAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTL---LSTDNKVISVACGYYH 200

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  +T  GE++T+G  + G   +G+       +  K  +  +  +   VACG  HT +++
Sbjct: 201 TAFVTDVGEVFTFGEGDGGK--LGQGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLT 256

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+++T+G+G  G LGH N     +     + +  KV  +A G  HTA + +       
Sbjct: 257 ECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFK-HKVTQIAAGENHTALVTE------- 308

Query: 446 SNAIGGKLFTWGDADKGRLG--HVDGERKLLPTCVTRLVDFDFVQASCG 492
                G+L+T+GD    +LG  H     +  P    R   F   Q SCG
Sbjct: 309 ----KGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCG 353



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 106/230 (46%), Gaps = 39/230 (16%)

Query: 220 DVMIWG---EGVLG-GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           ++ +WG   EG LG GDI               D   P LL +     V +++ G  H A
Sbjct: 159 ELYVWGGGSEGQLGLGDID--------------DKSTPTLLSTDNK--VISVACGYYHTA 202

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
            VT  GEVF +GEG  G+LG   +   +  PK V        +SV+CG   T  LT+ G+
Sbjct: 203 FVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE--KAKSVACGGSHTVVLTECGK 260

Query: 335 IYTWGHNNHGADLVGERRSRSH-----WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           +YT+G   +G   +G +    +     WL  K        +V+++A GE HTA+V+  GQ
Sbjct: 261 VYTFGEGGNGQ--LGHKNKYFYCETPVWLNFKH-------KVTQIAAGENHTALVTEKGQ 311

Query: 390 LFTYGDGTFGVLG--HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           L+T+GDG    LG  H    N   P+  +      V  V+CG  H   + 
Sbjct: 312 LYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVLA 361



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +CG   T  +T  G+++T G    GQLG  + K  +      KLK E VK ++ G  H  
Sbjct: 42  ACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTI 101

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           V T  G +YT+G N +GQLG+ D      P  VE    RQ +++  G+  + A+
Sbjct: 102 VATESGCLYTFGANGDGQLGVEDIPSSNCPVKVEC-EPRQYKALAAGADHSVAL 154


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 21/327 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G +H+  +  +G V+  G    G+LGH  +   S P+LV  L    +  VSCG+
Sbjct: 36  LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQ 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVG--ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
             + A+ + G+++ WG  + G   +G  E   R   L +KL +     R+S+V CG  H 
Sbjct: 94  AHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEH----RISQVMCGNHHC 149

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
             +S  GQLF +G+ + G LG G  + +   P+ ++SL G+ +  ++ G  H+ A+    
Sbjct: 150 IALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL---- 205

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                  +  G +F WG    G+LG  D + + +P  +  L     V  SCG   T  LT
Sbjct: 206 -------SFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALT 258

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYT 559
             G ++T G+   GQLG+   ++  +     +L    V  I+ G  H +A + S G +Y 
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYA 318

Query: 560 WGKNANGQLGLGDSQERETPTFVEALR 586
           +G N  GQLG G     ++P  V  ++
Sbjct: 319 FGCNTQGQLGTGIRGSAKSPVPVSNIQ 345



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 134/267 (50%), Gaps = 15/267 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECL 311
           P+L+ +     +  +S G  H+  V ++G+VF WG G  G+LG     + V  P+L++ L
Sbjct: 75  PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKL 134

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
               +  V CG     AL+K G+++ WG N+ G   +G  +     L  +   +L G+ +
Sbjct: 135 CEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQ--LGLGKGEPSTLSPQPLKSLCGIPL 192

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           ++++ G  H+  +S SG +F +G  + G LG  + Q+ + P  ++ LR  KV  ++CG  
Sbjct: 193 TQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEE 252

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HTAA+              G LFT+G+  KG+LGH     + LP  V  L+  +  Q +C
Sbjct: 253 HTAALTK-----------EGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIAC 301

Query: 492 GRMLTVGLT-GLGKVYTMGSAVHGQLG 517
           GR  T+      G +Y  G    GQLG
Sbjct: 302 GRNHTLAFVPSTGLIYAFGCNTQGQLG 328



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 147/324 (45%), Gaps = 19/324 (5%)

Query: 283 VFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           + CWG    G+LG   +   V  P+      G  ++ V+CG   +  L   G +YT G N
Sbjct: 2   MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           + G   +G  +  S     +L   LD  ++S V+CG+ H+  V+  GQ+F +G G  G L
Sbjct: 62  SCGQ--LGHDKGGSR---PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116

Query: 402 GHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           G G  +  V  P+ ++ L   ++  V CG  H           C + +  G+LF WG+  
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHH-----------CIALSKDGQLFVWGENS 165

Query: 461 KGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            G+LG   GE   L P  +  L      Q S G   +  L+  G V+  G    GQLG  
Sbjct: 166 SGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLN 225

Query: 520 KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
             +DR++      L+ + V  IS G  H A LT  G ++T+G  + GQLG   ++    P
Sbjct: 226 DEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP 285

Query: 580 TFVEALRDRQVESVVCGSSITAAI 603
             V  L   +V  + CG + T A 
Sbjct: 286 RRVMELMGTEVSQIACGRNHTLAF 309



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 23/246 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G      GG +    ++   +V  L+ KL E      +  +  G  H   ++K+
Sbjct: 105 VFAWGAGD-----GGQLGLGTAEEAVRVPRLIKKLCEH----RISQVMCGNHHCIALSKD 155

Query: 281 GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G++F WGE   G+LG  K       P+ ++ L GI +  +S G   + AL+ SG ++ WG
Sbjct: 156 GQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWG 215

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G   + + + R+  +P  +   L   +V  ++CGE HTA ++  G LFT+G+G+ G
Sbjct: 216 KNSAGQLGLNDEQDRA--VPCHI-KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKG 272

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGH + +N   P+ V  L G +V  +ACG  HT A V             G ++ +G  
Sbjct: 273 QLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPST----------GLIYAFGCN 322

Query: 460 DKGRLG 465
            +G+LG
Sbjct: 323 TQGQLG 328



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 13/202 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           + +WGE            G +   K +   L P+ L+S   + +  IS G  H+  ++  
Sbjct: 158 LFVWGENS---------SGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFS 208

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G VF WG+   G+LG     D + P  ++ L    V  +SCGE  T ALTK G ++T+G+
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGN 268

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFG 399
            + G   +G   +R+  LPR++ + L G  VS++ACG  HT A V ++G ++ +G  T G
Sbjct: 269 GSKGQ--LGHDSTRNEPLPRRVME-LMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQG 325

Query: 400 VLGHGNLQNVSQPKEVESLRGL 421
            LG G   +   P  V +++ L
Sbjct: 326 QLGTGIRGSAKSPVPVSNIQPL 347


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 161/343 (46%), Gaps = 33/343 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC----PKLVECLSGINVQSV 319
           V+ +S    HAA VT+ G+VF  G+      GH+   D SC    P+LVE L+GI  + V
Sbjct: 165 VEQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHR---DTSCRIFRPRLVEALNGIPCKQV 221

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           S G   +  LT+ G +YT G N +G   +G   +     P+ +   ++   V ++A G  
Sbjct: 222 SVGHNFSVFLTRQGHVYTCGTNTYGQ--LGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPS 279

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIV 437
           +   V   G+++++G G+   LGHG   N  QP+ +++ R   + V SV+ G  H  A+ 
Sbjct: 280 YVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVAL- 338

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                   SN   G ++TWG    G LGH D   K +P  +  L +   VQ    +  T 
Sbjct: 339 -------DSN---GLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTF 388

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGK----LKEEFVKGISSGSYHVAVL 551
            L   G VY  G    G LG P   DR ++  V+  +    L+   V  IS+G YH  V+
Sbjct: 389 VLVDTGIVYGFGWMGFGSLGFP---DRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVV 445

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPT--FVEALRDRQVES 592
           T  G ++ +G N   QLG    +    PT  F+  L D  + S
Sbjct: 446 TEKGKIFGFGDNERAQLGHESLRGCLEPTEIFIHDLDDESIVS 488



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 146/345 (42%), Gaps = 23/345 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINVQSVSCGEF 324
           I+ G  H  L++  G V+  G    G LGH  +    C     +     I V+ VS    
Sbjct: 116 IATGRYHTLLISN-GSVYSCGSSLCGVLGHG-SETTQCVTFTRINFPPSIYVEQVSASHN 173

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
               +T+SG+++T G N+  +   G R +       +L + L+G+   +V+ G   +  +
Sbjct: 174 HAAFVTQSGQVFTCGDNS--SFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFL 231

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIVDIMVDR 443
           +  G ++T G  T+G LGHGN      PK V+ L  +  V  +A GP +  A+V+     
Sbjct: 232 TRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVN----- 286

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDFDFVQASCGRMLTVGLTG 501
                  G+++++G      LGH +   +  P  +   RL +   V  S G    V L  
Sbjct: 287 ------DGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDS 340

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G VYT G    G LG+    D++I      LK      + +      VL   G VY +G
Sbjct: 341 NGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFG 400

Query: 562 KNANGQLGLGD---SQERETPTFVEALRDRQVESVVCGSSITAAI 603
               G LG  D   S +   P  +++LR  +V  +  G   T  +
Sbjct: 401 WMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVV 445



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 19/278 (6%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N+Q ++ G + T  L  +G +Y+ G +  G    G   ++     R  F     + V +V
Sbjct: 113 NMQ-IATGRYHT-LLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFP--PSIYVEQV 168

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHT 433
           +    H A V+ SGQ+FT GD +    GH +    + +P+ VE+L G+  K V+ G  H 
Sbjct: 169 SASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG--HN 226

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF-DFVQASCG 492
            ++    + R       G ++T G    G+LGH +      P  V RLV+    +Q + G
Sbjct: 227 FSV---FLTR------QGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAG 277

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAV 550
               + +   G+VY+ GS  +  LG+ +  +  +   +   +LK   V  +S+G  H   
Sbjct: 278 PSYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVA 337

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
           L S G VYTWGK   G LG GD  ++  P  + +L++ 
Sbjct: 338 LDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNH 375



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 18/271 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E+   +  + +S+G   +  +T++G V+  G    G+LGH   ++   PK+V+ L 
Sbjct: 207 PRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLV 266

Query: 313 GI-NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT-LDGVR 370
            I +V  ++ G     A+   G +Y++G  ++    +G     + + PR L    L  + 
Sbjct: 267 EIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFC--LGHGEQHNEFQPRVLQTFRLKNIH 324

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  V+ G+ H   + ++G ++T+G G  G LGHG+  + + P+ + SL+      V    
Sbjct: 325 VVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARK 384

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFV 487
             T  +VD            G ++ +G    G LG  D    ++ L P  +  L      
Sbjct: 385 RKTFVLVDT-----------GIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVS 433

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           Q S G   TV +T  GK++  G     QLG+
Sbjct: 434 QISTGLYHTVVVTEKGKIFGFGDNERAQLGH 464



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q +   P++L++  +  + V ++S G +HA  +   G V+ WG+G  G LGH   +D + 
Sbjct: 306 QHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTI 365

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+ +  L       V   + +T  L  +G +Y +G    G+    +R      L  +  D
Sbjct: 366 PQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLD 425

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L   RVS+++ G +HT +V+  G++F +GD     LGH +L+   +P E+
Sbjct: 426 SLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEI 476


>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1294

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 169/355 (47%), Gaps = 63/355 (17%)

Query: 294 LGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LGHK    + + PK+  C   + +++VSCGE  +  +T+ G IYT G N  G   +  + 
Sbjct: 39  LGHKHQGKNYTIPKI--CCYNLIIRTVSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKS 96

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
             S   P  L + L  ++   ++CG+ HT  V  +G+++ +GDG++G LG+G+ ++   P
Sbjct: 97  ITSSSTPC-LVEDLSKIKCLSLSCGQSHTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAP 155

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
             + S     ++ V CG  HT     I++D      +  K +  G  + G+LG    + +
Sbjct: 156 TRIVSENNEFIQ-VQCGSRHT-----ILLD------LKKKAYVCGSNENGQLGLRSTKIE 203

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITV 528
           L    + +L +  F++A+CG+  ++ L   G+VY+ G+   GQLG    N + +   I  
Sbjct: 204 LF---IKKLDNKGFIEAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQINS 260

Query: 529 VEG----------------KLKEEFVKG------------------------ISSGSYHV 548
           +EG                K  E ++ G                        IS G++  
Sbjct: 261 LEGEQIVKIAAGSHSAALNKKGEMYIWGTGVFGEYLFPNKINRHSSGTTFSDISVGNFFA 320

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           A +   G+V+TWG N+NG+LG GD + +  P  ++AL+ R V+ + CG     A+
Sbjct: 321 AAVDINGAVWTWGANSNGELGQGDYEPKTLPQTLQALKGRHVQKICCGGGFAMAL 375



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 32/285 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+E    +   ++S G  H   V + GEV+ WG+G  G+LG+        P  +   +
Sbjct: 103 PCLVEDLSKIKCLSLSCGQSHTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSEN 162

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +Q V CG   T  L    + Y  G N +G   +G R ++     +K    LD     
Sbjct: 163 NEFIQ-VQCGSRHTILLDLKKKAYVCGSNENGQ--LGLRSTKIELFIKK----LDNKGFI 215

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           + ACG++H+ ++   G++++ G  +FG LG G   N  +  ++ SL G ++  +A G  H
Sbjct: 216 EAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAGS-H 274

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-FDFVQASC 491
           +AA+              G+++ WG         V GE  L P  + R      F   S 
Sbjct: 275 SAAL-----------NKKGEMYIWGTG-------VFGEY-LFPNKINRHSSGTTFSDISV 315

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGN----PKAKDRSITVVEGK 532
           G      +   G V+T G+  +G+LG     PK   +++  ++G+
Sbjct: 316 GNFFAAAVDINGAVWTWGANSNGELGQGDYEPKTLPQTLQALKGR 360


>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Strongylocentrotus purpuratus]
          Length = 536

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 144/293 (49%), Gaps = 18/293 (6%)

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE--CLSGINVQSVSCGEFQTCALTK 331
           A  VTK+ EVF +G   +  LG    M    P+ +E  C  G+   +   G     A T+
Sbjct: 38  AIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGP-HVVAATE 96

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           +GEIY+WGHN  G   +G   +    LP ++   L   ++S++ACG  H+ +++  G++F
Sbjct: 97  NGEIYSWGHN--GYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVF 154

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
            +G    G +G G   N+S P++V S L G +V S+ACG   + A+VD            
Sbjct: 155 AWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVD-----------S 203

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G+++ WG    G+LG  +   +  P  V+ L      QA+CG   ++ L+  G +YT G+
Sbjct: 204 GEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGA 263

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGK 562
             +GQLG     +       G+    F+   ++   H+ A +T  G VY WG+
Sbjct: 264 NSYGQLGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ 316



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 24/269 (8%)

Query: 248 VDALLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCP 305
           + +L P+ +E      +  ++ G+  H    T+ GE++ WG     +LG+   N  +   
Sbjct: 64  MSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPH 123

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           ++   L    +  ++CG   +  LT  GE++ WG+NN G   VG   + +   PRK+   
Sbjct: 124 RITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQ--VGSGATANISTPRKVVSV 181

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           L G RV  +ACG+  +  V  SG+++ +G    G LG GN  N   P +V SL GL +  
Sbjct: 182 LGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQ 241

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTR 480
            ACG  H+ A+ D            G ++TWG    G+LG     ++ G  K+  + + R
Sbjct: 242 AACGYAHSMALSD-----------EGNIYTWGANSYGQLGTGNKANLCGAAKIGES-IGR 289

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
            +D   + A+    ++  +T  GKVY  G
Sbjct: 290 FID---IAATHYAHISAAMTQTGKVYMWG 315



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 25/248 (10%)

Query: 365 TLDGVRVSKVACGEWHTAI-VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGL 421
            + GV+++ V     + AI V+   ++F +G+     LG G++ +   P+++E L  +G+
Sbjct: 21  VVSGVKLACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGM 80

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT-R 480
              +   GP H  A  +            G++++WG     +LG+    + LLP  +T  
Sbjct: 81  FALAFGSGP-HVVAATE-----------NGEIYSWGHNGYCQLGNGTTNQGLLPHRITGN 128

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKE 535
           L      Q +CG   ++ LT  G+V+  G    GQ+G     N     + ++V+ GK   
Sbjct: 129 LGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKR-- 186

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
             V  I+ G      +   G VY WG N NGQLGLG++  + +P  V +L    +    C
Sbjct: 187 --VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAAC 244

Query: 596 GSSITAAI 603
           G + + A+
Sbjct: 245 GYAHSMAL 252



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 25/251 (9%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTS 387
           +TK  E++ +G NNH A L G     S   PRK+ + L    +  +A G   H    + +
Sbjct: 41  VTKDDEVFAFG-NNHNACL-GLGDVMSSLTPRKI-EGLCKKGMFALAFGSGPHVVAATEN 97

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           G+++++G   +  LG+G       P  +  +L   K+  +ACG  H+     ++ DR   
Sbjct: 98  GEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSL----VLTDR--- 150

Query: 447 NAIGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G++F WG  + G++G     ++   RK++     + V    V  +CG+  ++ +  
Sbjct: 151 ----GEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRV----VSIACGQTSSLAVVD 202

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G+VY  G   +GQLG     ++        L    +   + G  H   L+  G++YTWG
Sbjct: 203 SGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWG 262

Query: 562 KNANGQLGLGD 572
            N+ GQLG G+
Sbjct: 263 ANSYGQLGTGN 273


>gi|363741143|ref|XP_415822.3| PREDICTED: serine/threonine-protein kinase Nek8 [Gallus gallus]
          Length = 698

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 148/339 (43%), Gaps = 42/339 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH-- 340
           ++ WG G            ++ P  +  L+   VQ VS G  Q   +TKSG +  W    
Sbjct: 320 IYTWGSG------------ITTPLRLPMLNTEVVQ-VSAGRTQKAGVTKSGRLIMWEAPP 366

Query: 341 --NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
                G  L G           +  +   GV +  V+CG+  TA ++  G + T+G G+ 
Sbjct: 367 MGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSN 426

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LGHGN  +VSQPK VE+L G ++  VACG  H  A+ +   +R        ++F WG 
Sbjct: 427 GCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSN---ER--------EVFAWGR 475

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG- 517
            D GRLG    E    P  V    + +  +  CG   ++ LT   ++   GS    +LG 
Sbjct: 476 GDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGL 535

Query: 518 ---------NPKAKDRSITVV----EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
                    +P+ +    TV        L +E V     G+ H A +T+ G  YT+G N 
Sbjct: 536 DRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQ 595

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +GQLG    +    P  V  LR  +V  V CG + T AI
Sbjct: 596 HGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI 634



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 9/300 (3%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    +G   G ++ G+  Q + Q    + + LE    + ++++S G    A +T  
Sbjct: 359 LIMWEAPPMGTAGGPSLPGATEQLQPQ---FVSRFLEGQSGVTIKHVSCGDLFTACLTDR 415

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DVS PK+VE L G  +  V+CG     A++   E++ WG 
Sbjct: 416 GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGR 475

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            ++G   +G      H  P+++    +     +V CG   + +++ + Q+   G      
Sbjct: 476 GDNGR--LGLGTLECHNSPQQVAVPPEH-EAQRVICGIDSSMVLTVNNQILACGSNRCNK 532

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVA-CGPWHTAAIV--DIMVDRCKSNAIGGKLFTWG 457
           LG   + +  +P   + +    V + A   P +   +V  DI      +    G+ +T+G
Sbjct: 533 LGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFG 592

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG        +P  V  L        +CG   TV +   G+V T G    G+LG
Sbjct: 593 SNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLG 652



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 11/200 (5%)

Query: 430 PWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVD- 483
           P     +V +   R +   +   G+L  W     G  G         +L P  V+R ++ 
Sbjct: 334 PMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEG 393

Query: 484 ---FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVK 539
                    SCG + T  LT  G + T GS  +G LG+    D S   +VE  L  E V+
Sbjct: 394 QSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ 453

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            ++ G+ HV  +++   V+ WG+  NG+LGLG  +   +P  V    + + + V+CG   
Sbjct: 454 -VACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDS 512

Query: 600 TAAICLHKSISVGDQSSCSQ 619
           +  + ++  I     + C++
Sbjct: 513 SMVLTVNNQILACGSNRCNK 532


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 163/381 (42%), Gaps = 46/381 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLS---GINVQSVSCGEFQTCALTKSGEIYTWG 339
           V+ +G+   G L      D S P  V+  +   G  V  V+CG  QT  L + G++YT G
Sbjct: 33  VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCG 92

Query: 340 HNNHGADLVG--ERRSRSHWLPRKLFDTLDGVRVSKVACGEW--HTAIVSTSGQLFTYGD 395
           +N+ G   +G  ER     + P      L   R  ++  G    H A +  +G L+T G 
Sbjct: 93  YNDSGQCAIGTTERVPTLRFSP-----GLSSNRTVRIFSGNGSEHLAALHANGNLYTVGF 147

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              G LG G+   V +   VE L G +V  V C  +HTA ++D            G L+ 
Sbjct: 148 NMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMD-----------NGDLYA 196

Query: 456 WGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            G  D G+LG   H +GE  L+P  V        +  +CG+  T+     G V   G   
Sbjct: 197 CGCNDYGQLGLGDHRNGE--LVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKND 254

Query: 513 HGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
           HGQLG     +     T +   L    V  +S G +H AV+T  G+VYT+G+N  GQLGL
Sbjct: 255 HGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGL 314

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKK 630
           G       P  VE+L   ++  V CG       C H  +   D         PFG  R  
Sbjct: 315 GHKMHMARPARVESLARMRITQVACG-------CYHTLVLSDDGKV-----FPFG--RNN 360

Query: 631 HNCYNCGLHFCSACSTKKIIN 651
           H     GL     C + ++I+
Sbjct: 361 HG--QLGLETSVDCLSPQLIS 379



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 157/348 (45%), Gaps = 23/348 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +++ G +  A++ ++G+V+  G    G+        V   +    LS      +  G 
Sbjct: 69  VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGN 128

Query: 324 F--QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
                 AL  +G +YT G N  G   +G   S +  +   L + L G RV+ V C  +HT
Sbjct: 129 GSEHLAALHANGNLYTVGFNMRGQLGLG---SSTTVMEATLVEELAGKRVADVGCSYFHT 185

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           AIV  +G L+  G   +G LG G+ +N    P+ VE      V +VACG  +T A +   
Sbjct: 186 AIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLR-- 243

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFV-QASCGRMLTV 497
                     G +  +G  D G+LG +D   + +  PT +   +D   V Q SCG   T 
Sbjct: 244 ---------DGGVVAFGKNDHGQLG-LDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTA 293

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            +T  G VYT G   +GQLG       +       L    +  ++ G YH  VL+  G V
Sbjct: 294 VVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKV 353

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           + +G+N +GQLGL  S +  +P  +  LR++ V  V  G     ++CL
Sbjct: 354 FPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAG--FYHSVCL 399



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 17/241 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG---HKVNMDVSCPKLVECLSGINVQSVS 320
           V ++     H A+V   G+++  G    G+LG   H+    V  P+ VE      V +V+
Sbjct: 175 VADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELV--PRPVEYFFRRPVLAVA 232

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           CG+  T A  + G +  +G N+HG  L  +  S     P +L   LD + V +++CG  H
Sbjct: 233 CGQHYTIASLRDGGVVAFGKNDHG-QLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHH 291

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA+V+  G ++T+G   +G LG G+  ++++P  VESL  +++  VACG +HT  + D  
Sbjct: 292 TAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSD-- 349

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                     GK+F +G  + G+LG       L P  ++ L +    + + G   +V L 
Sbjct: 350 ---------DGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400

Query: 501 G 501
           G
Sbjct: 401 G 401



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 15/285 (5%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G++H A +   G ++  G    G+LG   +  V    LVE L+G  V  V C  F T  +
Sbjct: 129 GSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIV 188

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
             +G++Y  G N++G   +G+ R+    +PR + +      V  VACG+ +T      G 
Sbjct: 189 MDNGDLYACGCNDYGQLGLGDHRN-GELVPRPV-EYFFRRPVLAVACGQHYTIASLRDGG 246

Query: 390 LFTYGDGTFGVLGHGNL-QNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           +  +G    G LG  +  + VSQP  + + L  L V  ++CG  HTA + +         
Sbjct: 247 VVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTE--------- 297

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              G ++T+G  D G+LG         P  V  L      Q +CG   T+ L+  GKV+ 
Sbjct: 298 --DGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFP 355

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
            G   HGQLG   + D     +   L+ + V  +++G YH   L 
Sbjct: 356 FGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 41/82 (50%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +ES   + +  ++ G  H  +++ +G+VF +G    G+LG + ++D   P+L+  L 
Sbjct: 323 PARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLR 382

Query: 313 GINVQSVSCGEFQTCALTKSGE 334
              V  V+ G + +  L    E
Sbjct: 383 NKTVTKVAAGFYHSVCLVGPTE 404


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 17/277 (6%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVEC 310
           +P+L++  +      I+ G++H+  +T+ G+V  WG+ + G+LGH  + D V  PK V  
Sbjct: 80  IPELVDCVI----TQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRA 135

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L    V  ++CG   + ALT  GE+Y WG N +G   V             L  TL G+ 
Sbjct: 136 LVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIP 195

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +ACG  H+ ++S S  +F +G    G LG  +  N + P ++++LR L V+ VACG 
Sbjct: 196 VRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGD 255

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
             +  + +            G +FT G    G+LGH     ++LP  V  L+     Q +
Sbjct: 256 EFSVFLTN-----------EGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVA 304

Query: 491 CGRMLTVGLT-GLGKVYTMGSAVHGQLGNPKAKDRSI 526
           CG   T+ +    G++Y  G    GQLG    K  ++
Sbjct: 305 CGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNL 341



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 172/359 (47%), Gaps = 24/359 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSC 321
           V  I+ G +H   +T  G+V+  G     +LGH+++    +  P+LV+C+    +  ++C
Sbjct: 38  VNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV----ITQIAC 93

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   + ALT+ G++ +WG N  G   +G    +      K    L    V ++ACG  H+
Sbjct: 94  GSRHSMALTEWGQVLSWGDNECGQ--LGHASDQDVVQLPKTVRALVSKTVVQIACGNNHS 151

Query: 382 AIVSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             ++  G+L+ +G   +G LG      L   + P  + +L G+ V+++ACG  H+  I  
Sbjct: 152 LALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLI-- 209

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                 KS+A+    F WG  + G+LG  D   +  PT +  L        +CG   +V 
Sbjct: 210 -----SKSSAV----FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVF 260

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSV 557
           LT  G V+T G+  +GQLG+    +  +  +  +L    +  ++ G+ H +A++ + G +
Sbjct: 261 LTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRI 320

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS-ITAAICLHKSISVGDQS 615
           Y +G  ++GQLG  +++    P  V         S +  SS    A+ + +  S GDQS
Sbjct: 321 YGFGLGSSGQLGTRNTKSLNLPQMVIGPWVSPSGSALLQSSDAQIAVVIRQIFSGGDQS 379



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 18/274 (6%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+Y WG+ +HG   +G         P K+    D   V+++ACG  HT  ++ SG+++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSA-VNQIACGHRHTLFLTASGKVYAC 60

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G   +  LGH    +  +P ++  L    +  +ACG  H+ A+ +            G++
Sbjct: 61  GSNDYAQLGHE--LSSKRPLQIPELVDCVITQIACGSRHSMALTE-----------WGQV 107

Query: 454 FTWGDADKGRLGHV-DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            +WGD + G+LGH  D +   LP  V  LV    VQ +CG   ++ LT  G++Y  GS +
Sbjct: 108 LSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNI 167

Query: 513 HGQLGNPKAKDR---SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           +GQLG     +    +  ++   L    V+ I+ G  H  +++   +V+ WG+N  GQLG
Sbjct: 168 YGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLG 227

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           L D   R  PT ++ LR   V  V CG   +  +
Sbjct: 228 LNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFL 261



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 150/329 (45%), Gaps = 24/329 (7%)

Query: 282 EVFCWGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           E++CWG    G+LG     D  +  P  +       V  ++CG   T  LT SG++Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N++ A L  E  S+    P ++ + +D V ++++ACG  H+  ++  GQ+ ++GD   G
Sbjct: 62  SNDY-AQLGHELSSKR---PLQIPELVDCV-ITQIACGSRHSMALTEWGQVLSWGDNECG 116

Query: 400 VLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LGH + Q+V Q PK V +L    V  +ACG  H+ A+              G+L+ WG 
Sbjct: 117 QLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLAL-----------TCCGELYAWGS 165

Query: 459 ADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
              G+LG V    +L     P  +T L+       +CG   +  ++    V+  G    G
Sbjct: 166 NIYGQLG-VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224

Query: 515 QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           QLG     +R+       L+   V+ ++ G      LT+ G V+T G  A GQLG G   
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAI 603
               P  V  L    +  V CG+  T A+
Sbjct: 285 NEMLPRMVMELMGSTISQVACGNRHTLAM 313



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 25/261 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG+   G  +G A D  V Q        LPK + + V   V  I+ G  H+  +T  
Sbjct: 107 VLSWGDNECG-QLGHASDQDVVQ--------LPKTVRALVSKTVVQIACGNNHSLALTCC 157

Query: 281 GEVFCWGEGKDGRLGHKVNMDV---SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           GE++ WG    G+LG K   ++   + P L+  L GI V++++CG   +  ++KS  ++ 
Sbjct: 158 GELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFG 217

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG NN G   + +  +R++    K   TL GVR   VACG+  +  ++  G +FT G G 
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTL-GVRF--VACGDEFSVFLTNEGGVFTCGAGA 274

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           +G LGHG   N   P+ V  L G  +  VACG  HT A+V             G+++ +G
Sbjct: 275 YGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMV----------PARGRIYGFG 324

Query: 458 DADKGRLGHVDGERKLLPTCV 478
               G+LG  + +   LP  V
Sbjct: 325 LGSSGQLGTRNTKSLNLPQMV 345


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 153/338 (45%), Gaps = 26/338 (7%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EV+  G+   G LGH         + +E L    +  +  G   T ALT  G++ T G+N
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYN 493

Query: 342 NHGADLVGERRSRSHW--LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
           ++G    G     SH   +P+   + +  V       G  HT +V+  G+  T G    G
Sbjct: 494 DNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYN---GCEHTILVTMDGRAATCGYNYRG 550

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK-LFTWGD 458
            LGHGN  + S PK V SL    V+ V+C  +HT       V  C+ +  G + L+T+G 
Sbjct: 551 QLGHGNTASESVPKIVRSLENRIVRLVSCSYYHT-------VMACEEDGSGQQYLYTFGR 603

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            D G+LGH D   + +P  V  + D   V  +CG+  T+ +T  GK +  G   +GQLG 
Sbjct: 604 NDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGI 663

Query: 519 PKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
              +++ + V V   L++     I  G YH  VL SG  ++ +G+N  GQLGLG +    
Sbjct: 664 DSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASS 723

Query: 578 TPT------------FVEALRDRQVESVVCGSSITAAI 603
           T               +E L  + +    CG   T A+
Sbjct: 724 TANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAV 761



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 169/384 (44%), Gaps = 38/384 (9%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS----CPKLVECL 311
           +ES    ++  I  G +H   +T +G+V   G   +G+ G      VS     PK+ +  
Sbjct: 460 IESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGD-- 517

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           + I+      G   T  +T  G   T G+N  G   +G   + S  +P K+  +L+   V
Sbjct: 518 NAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQ--LGHGNTASESVP-KIVRSLENRIV 574

Query: 372 SKVACGEWHTAIV---STSGQ--LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             V+C  +HT +      SGQ  L+T+G   +G LGH +  +   P+ VE++    V SV
Sbjct: 575 RLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSV 634

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFD 485
           ACG +HT  +              GK F +G  D G+LG    E +L+P  V   L   +
Sbjct: 635 ACGQYHTMVVTAT-----------GKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHE 683

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE--------GKLKEEF 537
            ++  CG   T+ L     ++  G   +GQLG  +A   S   ++         +L EE 
Sbjct: 684 CLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEEL 743

Query: 538 ----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
               +   + G YH   ++  G +Y +G+N +GQLG GD+ ER  P  ++    ++V  V
Sbjct: 744 EGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALV 803

Query: 594 VCGSSITAAICLHKSISVGDQSSC 617
             G   T  +   K     DQ + 
Sbjct: 804 AAGFYHTVVLTGGKEDEKNDQDAA 827



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 30/267 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEG-----EVFCWGEGKDGRLGHKVNMDVSCPK 306
           +PK++ S     V+ +S    H  +  +E       ++ +G    G+LGH  ++D   P+
Sbjct: 562 VPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQ 621

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
            VE +   +V SV+CG++ T  +T +G+ + +G N++G   +G     +  +P ++   L
Sbjct: 622 HVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQ--LGIDSMENQLVPVQVRAGL 679

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--------NL----QNVSQPKE 414
           +     ++ CG +HT ++ +   LF +G   +G LG G        NL    Q  S  + 
Sbjct: 680 EKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARL 739

Query: 415 VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           +E L G  +   ACG +HT A+ D            G ++ +G  + G+LG  D   ++ 
Sbjct: 740 IEELEGKDIVRFACGCYHTVAVSD-----------NGVMYVFGRNNHGQLGTGDTNERVY 788

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTG 501
           P  +   V       + G   TV LTG
Sbjct: 789 PFPIDDFVGKRVALVAAGFYHTVVLTG 815



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 23/214 (10%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G +  N + +D  +P+ +E+     V +++ G  H  +VT  G+ F +G+   G+LG   
Sbjct: 607 GQLGHNDS-IDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDS 665

Query: 299 NMDVSCPKLV-------ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
             +   P  V       ECL       + CG + T  L     ++ +G N++G   +G  
Sbjct: 666 MENQLVPVQVRAGLEKHECLE------IRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719

Query: 352 RSRS---------HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            + S          +   +L + L+G  + + ACG +HT  VS +G ++ +G    G LG
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG 779

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
            G+      P  ++   G +V  VA G +HT  +
Sbjct: 780 TGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVL 813



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 22/279 (7%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+++ G N++G    G+  SR  +   +  ++L    + ++  G  HT  ++  G++ T 
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSF---ERIESLQQKEIIQIGAGNEHTIALTVDGKVLTC 490

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRCKSNAIGG 451
           G    G  G G    VS   E+  +    +  V    G  HT  +            + G
Sbjct: 491 GYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVT-----------MDG 539

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL-----TGLGKVY 506
           +  T G   +G+LGH +   + +P  V  L +      SC    TV       +G   +Y
Sbjct: 540 RAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLY 599

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           T G   +GQLG+  + DR +      + ++ V  ++ G YH  V+T+ G  + +GKN  G
Sbjct: 600 TFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 567 QLGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAAIC 604
           QLG+   + +  P  V A L   +   + CG   T  +C
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLC 698


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 180/395 (45%), Gaps = 71/395 (17%)

Query: 234 GGAVDGSVSQNKTQV-DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
           G   +G ++ +K      L+PK L+   +  +  I+ G  H   +T +GEV+  G  +  
Sbjct: 13  GSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCGCNEFQ 72

Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           +LGH  +      K+V  L    + SV+CG +   A+T +G ++TWG N++G   +G   
Sbjct: 73  QLGHGQSGG-QLAKVV-ALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQ--LGREG 128

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVS 410
             +     KL   L   +V +V+ G  HT +++ + ++F +G    G LG G  + Q+VS
Sbjct: 129 DDTG---VKLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVS 185

Query: 411 QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG----- 465
            P+++  L GL V+ +  G WH+  +            + G L+ WG  + G+LG     
Sbjct: 186 IPQQILCLSGLPVRRIVAGGWHSFVL-----------TVSGSLYAWGSNNYGQLGLSYFG 234

Query: 466 --------------------HVDGERK---------------LLPTCVTRLVDFDFVQAS 490
                                VD E+                 +PT V  L   + V  +
Sbjct: 235 SSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLA 294

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK-----DRSITVVEGKLKEEFVKGISSGS 545
           CG   TV LT  G V+T G+  +GQLG+ ++       R IT   G +    V  I+ G 
Sbjct: 295 CGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNV----VTQIACGR 350

Query: 546 YH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           +H +A++   G ++ +G+  N QLG+GD++ R  P
Sbjct: 351 FHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLP 385



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 137/312 (43%), Gaps = 58/312 (18%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E++ WG    G   + +  +    +P+ L D  +   + ++ CG  HT  ++  G++++ 
Sbjct: 8   ELFAWGSCEEGQLTLDKNDAYQILIPKAL-DVRNLPTLIQITCGYTHTVFLTIDGEVYSC 66

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G   F  LGHG  Q+  Q  +V +L   ++ SVACG +H AAI              G L
Sbjct: 67  GCNEFQQLGHG--QSGGQLAKVVALEHYRIISVACGAYHNAAI-----------TYNGLL 113

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           FTWG    G+LG    +  +    V  L D   VQ S G   T+ LT   +V+  GS + 
Sbjct: 114 FTWGCNSNGQLGREGDDTGV--KLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLK 171

Query: 514 GQLGNPKAKDRSITVVEGKL--KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL- 570
           GQLG   + ++S+++ +  L      V+ I +G +H  VLT  GS+Y WG N  GQLGL 
Sbjct: 172 GQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLS 231

Query: 571 ------GDSQERET---------------------------------PTFVEALRDRQVE 591
                  D Q   T                                 PTFV+ LR  +V 
Sbjct: 232 YFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVV 291

Query: 592 SVVCGSSITAAI 603
            + CG + T A+
Sbjct: 292 YLACGETHTVAL 303



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 45/197 (22%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----------HKVNM----------- 300
           L V+ I  G  H+ ++T  G ++ WG    G+LG          H+  +           
Sbjct: 196 LPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTS 255

Query: 301 -------------------DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
                              +VS P  V+ L G  V  ++CGE  T ALT+ G ++T+G  
Sbjct: 256 VDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAG 315

Query: 342 NHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFG 399
            +G   +G   S     +PRK+ + +  V V+++ACG +HT A+V  +G+LF +G GT  
Sbjct: 316 RYGQ--LGHNESTIGISVPRKITEFMGNV-VTQIACGRFHTLALVPKTGRLFAFGQGTNA 372

Query: 400 VLGHGNLQNVSQPKEVE 416
            LG G+ +N   P  V+
Sbjct: 373 QLGMGDTKNRLLPCPVK 389



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 148/392 (37%), Gaps = 57/392 (14%)

Query: 383 IVSTSGQLFTYGDGTFG--VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           + S + +LF +G    G   L   +   +  PK ++      +  + CG  HT  +    
Sbjct: 2   VSSATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFL---- 57

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                   I G++++ G  +  +LGH     +L    V  L  +  +  +CG      +T
Sbjct: 58  -------TIDGEVYSCGCNEFQQLGHGQSGGQL--AKVVALEHYRIISVACGAYHNAAIT 108

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G ++T G   +GQLG  +  D  + +V   L +  V  +S G  H  VLT    V+ +
Sbjct: 109 YNGLLFTWGCNSNGQLGR-EGDDTGVKLVRA-LSDHKVVQVSLGVEHTLVLTDTARVFAF 166

Query: 561 GKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
           G N  GQLGLG S E+    P  +  L    V  +V G   +  + +  S+     ++  
Sbjct: 167 GSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYG 226

Query: 619 QCRMP-FGFRRKKHN---CYNCGLHFCSACSTKKIINASLTP------NKGKPSRV---- 664
           Q  +  FG     H       CG    ++   ++  N   +P      N   P+ V    
Sbjct: 227 QLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLR 286

Query: 665 -CDTCY-----NHLQKITHSGRLLK---------QENQS------PRNLLNLQGSLSEEV 703
            C+  Y      H   +T  G +             N+S      PR +    G++  ++
Sbjct: 287 GCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQI 346

Query: 704 ---KEEKGALTPSRGQSFTSKQSRNVERKPGE 732
              +    AL P  G+ F   Q  N +   G+
Sbjct: 347 ACGRFHTLALVPKTGRLFAFGQGTNAQLGMGD 378



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVEC 310
           +P  +++    +V  ++ G  H   +T++G VF +G G+ G+LGH +  + +S P+ +  
Sbjct: 278 IPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITE 337

Query: 311 LSGINVQSVSCGEFQTCALT-KSGEIYTWGHNNHGADLVGERRSR-------SHWL 358
             G  V  ++CG F T AL  K+G ++ +G   +    +G+ ++R        HW+
Sbjct: 338 FMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPVKGHWV 393


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 169/364 (46%), Gaps = 25/364 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L P+ L  +V   V +++ G      V   G V   G+G  GRLG+  +   S P L+E 
Sbjct: 152 LYPRNL--SVYGKVMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEF 209

Query: 311 LSGINVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            + +     S G +  + A+ K+G+I+TWG  ++G   +G   S +   P KL + L   
Sbjct: 210 PAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGK--LGHGDSTTQKSP-KLIEALASR 266

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            +    CG  H+A V  +G L+ +G+G +G LG G+    S P +V  +R  +   V CG
Sbjct: 267 VIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCG 324

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT  +          +  G  ++++G A+ G+LGH D  R+  P  +  L      Q 
Sbjct: 325 FNHTVVL----------STDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQI 374

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYH 547
           + G  ++  +T  G +Y  G      LGN  + +  +   VV G L    V  I+ G  H
Sbjct: 375 AAGTQISAAVTREGALYVWGFGPC--LGNGSSDETFMLPKVVRG-LSGRVVIDIAVGENH 431

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSITAAICLH 606
           V  LT  G V+TWG N NGQ G G      T P  V+ L    ++ V  G++ T  +C  
Sbjct: 432 VVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT-FVCFW 490

Query: 607 KSIS 610
           ++ S
Sbjct: 491 RNTS 494



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 26/328 (7%)

Query: 298 VNMDVSCPKLVECLSGINVQS----VSCGEFQT-CALTKSGEIYTWGHNNHGADLVGERR 352
           +NM  + PK+    S + + S     SC +  T    + + E++ WG N+    L     
Sbjct: 89  LNMVATKPKVTADQSALTILSSIAAASCNDGGTNGGPSFAEEVFCWGSNSS-QQLTDATP 147

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                 PR L  ++ G +V  +  G++ T  V ++G +   G G++G LG+G   + S P
Sbjct: 148 EDKLLYPRNL--SVYG-KVMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSP 204

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGE 470
             +E             P     I+        S AIG  G+++TWGD D G+LGH D  
Sbjct: 205 ILIEF------------PAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLGHGDST 252

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
            +  P  +  L     V A CG   +  +   G +Y  G   +G+LG   A  RS+ V  
Sbjct: 253 TQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQV 312

Query: 531 GKLKEEFVKGISSGSYHVAVL-TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
             ++E     +  G  H  VL T G +V+++G   NG+LG GD+  +  P  ++AL+   
Sbjct: 313 PDIRE--ASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLT 370

Query: 590 VESVVCGSSITAAICLHKSISVGDQSSC 617
           +  +  G+ I+AA+    ++ V     C
Sbjct: 371 ITQIAAGTQISAAVTREGALYVWGFGPC 398


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 140/280 (50%), Gaps = 20/280 (7%)

Query: 286 WGEGKDGRLGHKVNMD--VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           +G    G LG     D  V  P+ +  L GI V+ ++ G   T  LT  G + + G N+H
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
             D +G+  S +   P      L  +R+ +V CG+ H+  ++ +GQ++ +G  + G LG+
Sbjct: 81  --DQLGQEVSTTKPEP---VTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGN 135

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  Q     P+ V++L    V  +ACG  H  A+++            G L+ WGD   G
Sbjct: 136 GEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN-----------NGALYAWGDNGNG 184

Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           +LG    GE + +P  VT L+     Q +CG   ++ L+  G ++  GS   GQLG    
Sbjct: 185 QLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDN 244

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           KDR+   +   L+++ VK I++G  H A LT+ G V+T+G
Sbjct: 245 KDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 20/276 (7%)

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           +G+ N G   +G        +PR +   L+G+RV ++A G  HT ++++ G++ + G   
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSI-PQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSND 79

Query: 398 FGVLGHGNLQNVS--QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              LG    Q VS  +P+ V +L+ L++  V CG  H+ A+ +            G+++ 
Sbjct: 80  HDQLG----QEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTE-----------AGQVYM 124

Query: 456 WGDADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
           WG   KG+LG+ +G E +L P  V  L  F  VQ +CG    + L   G +Y  G   +G
Sbjct: 125 WGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNG 184

Query: 515 QLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           QLG     + + + V    L    +  I+ G+ H  VL+  G ++ WG N  GQLGL D+
Sbjct: 185 QLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDN 244

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           ++R  PT ++ LR + V+ +  G + +AA+  H  +
Sbjct: 245 KDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGV 280



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 57/348 (16%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ I+ GA H  ++T  G V   G     +LG +V+   + P+ V  L  + +  V CG+
Sbjct: 53  VRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVS--TTKPEPVTALQCLRIVQVCCGQ 110

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + ALT++G++Y WG N+ G   +G    +   L  +   TL    V ++ACG  H   
Sbjct: 111 QHSMALTEAGQVYMWGSNSKGQ--LGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLA 168

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +  +G L+ +GD   G LG G +    + P EV +L GL +  +ACG  H+  +      
Sbjct: 169 LLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVL------ 222

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                +  G +F WG    G+LG  D + +  PT +  L        + G   +  LT  
Sbjct: 223 -----SKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAH 277

Query: 503 GKVYTMG---------------------SAV-------------------HGQLGNPKAK 522
           G V+T G                     SA+                   +GQLG+    
Sbjct: 278 GGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKN 337

Query: 523 DRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLG 569
           D+   +   +L    +  I+ G  H V    + G V+T+G   NGQLG
Sbjct: 338 DQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 33/288 (11%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVS 320
           L +  +  G +H+  +T+ G+V+ WG    G+LG+    +    P+ V+ L+   V  ++
Sbjct: 101 LRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIA 160

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           CG     AL  +G +Y WG N +G   +G        +P ++ + L G+ +S++ACG  H
Sbjct: 161 CGSNHCLALLNNGALYAWGDNGNGQLGIGT-VGEPQRVPVEVTNLL-GLPLSQIACGANH 218

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI---- 436
           + ++S SG +F +G   FG LG  + ++ + P  +++LR   VK +A G  H+AA+    
Sbjct: 219 SMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHG 278

Query: 437 --------------VDIMVDRCKSN---AIGGKLFTWGDAD--------KGRLGHVDGER 471
                         V I +   +SN   A+  KLF+  + +         G+LGH     
Sbjct: 279 GVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKND 338

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLT-GLGKVYTMGSAVHGQLGN 518
           +L P  +  L+     Q + GR  TV     +GKV+T G   +GQLG+
Sbjct: 339 QLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGS 386



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 54/273 (19%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +   + Q   L P+ +++     V  I+ G+ H   +   G ++ WG+  +G+
Sbjct: 126 GSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQ 185

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG   V      P  V  L G+ +  ++CG   +  L+KSG I+ WG N  G   + + +
Sbjct: 186 LGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNK 245

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG------------------ 394
            R+   P  L  TL    V  +A G  H+A ++  G +FT+G                  
Sbjct: 246 DRA--FP-TLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTES 302

Query: 395 ----------------------DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
                                  G++G LGHG+  +   P +++ L G  +  +A G  H
Sbjct: 303 NPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCH 362

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           T          C +  + GK+FT+G    G+LG
Sbjct: 363 TV---------CYAPTV-GKVFTFGLGGNGQLG 385


>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 529

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 28/354 (7%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           +G+ ++NK     L+P ++ +   +  + I   + H+  +T +G+   WG G   RLGH 
Sbjct: 187 EGNCTENK-----LVPTMIAATRDILFRRIDSLSTHSIAITAKGDAMAWGNGDKYRLGHG 241

Query: 298 VNMDVSCPKLVECLS-GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
            +     P+++E L     V+ ++CG   T AL +SGE++ WG+ ++G   +G+   R  
Sbjct: 242 SSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALMESGELFAWGNGSNGRLGLGDTNDR-- 299

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
             P     ++  VR   + CG  H+  +S  G+ +T+G    G  GHG+  +    +E+E
Sbjct: 300 --PESCSTSVP-VRFRHIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIE 356

Query: 417 SLR-GLKVKSV--ACGPW-HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR----LGHVD 468
           S   G + + V  A G W HT  +      R  S   G K     D+ +      LGH D
Sbjct: 357 SFEDGEEAECVTYAAGGWEHT--LFSTASGRVYSCGCGYK-----DSRRAGIPPVLGHGD 409

Query: 469 GERKLLPTCVTRLVDF--DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
            +R+L PT +  L D   + V+ +CG   ++ ++  GKVYT GS  +G+LG+   +    
Sbjct: 410 CDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDT 469

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
             +   ++   VK   +G  H   LT    +++ G+  +G+LG GDSQ R+ PT
Sbjct: 470 PTLVRTMEGRHVKDAKAGCEHTVFLTYDHELWSCGQGDSGRLGHGDSQTRKRPT 523



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 42/349 (12%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSC-----------PKLVECLSGINVQSVSCGEFQTCAL 329
           G +  +G+G  G+LGH   + VSC           P ++     I  + +      + A+
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLSTHSIAI 221

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           T  G+   WG+ +     +G   S   + PR +       RV  +ACG  HT  +  SG+
Sbjct: 222 TAKGDAMAWGNGD--KYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALMESGE 279

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           LF +G+G+ G LG G+  +  +P+   +   ++ + + CG  H+  +           + 
Sbjct: 280 LFAWGNGSNGRLGLGDTND--RPESCSTSVPVRFRHIFCGASHSLGL-----------SW 326

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD----FVQASCGRMLTVGLTGLGKV 505
            G+ +TWG  ++G+ GH     +     +    D +       A+ G   T+  T  G+V
Sbjct: 327 DGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEHTLFSTASGRV 386

Query: 506 YTMG--------SAVHGQLGNPKAKDR-SITVVEG--KLKEEFVKGISSGSYHVAVLTSG 554
           Y+ G        + +   LG+     R   T+++     +EE VK ++ G  H   +++ 
Sbjct: 387 YSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVK-VACGWDHSLAVSAS 445

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G VYTWG   NG+LG GD +  +TPT V  +  R V+    G   T  +
Sbjct: 446 GKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAGCEHTVFL 494



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 270 GAKHAALVTKEGEVFCWGEG-KDGR-------LGHKVNMDVSCPKLVECLSGI--NVQSV 319
           G +H    T  G V+  G G KD R       LGH        P L++ L      +  V
Sbjct: 373 GWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKV 432

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           +CG   + A++ SG++YTWG   +G   +G     S   P  L  T++G  V     G  
Sbjct: 433 ACGWDHSLAVSASGKVYTWGSGTNGK--LGHGDEESFDTP-TLVRTMEGRHVKDAKAGCE 489

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           HT  ++   +L++ G G  G LGHG+ Q   +P ++
Sbjct: 490 HTVFLTYDHELWSCGQGDSGRLGHGDSQTRKRPTKI 525


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 129/244 (52%), Gaps = 14/244 (5%)

Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
           WG  ++G+LG     D   P+ ++   GI+++ V+ G   T A+T+ GE++ WG   +G 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
             +G+R  R   +P+K+  ++DG ++  VACG  HT  VS+ G L+TYG   +G LGHG+
Sbjct: 61  LGLGDRNDRL--VPQKV-SSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 406 LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            ++   P  +E+LRG  +  ++ G  HT A+              GKL+ WG    G++G
Sbjct: 118 FEDRLVPHRLEALRGDNISQISGGWRHTMALT-----------TDGKLYGWGWNKFGQVG 166

Query: 466 HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
             D      P  +    D   +Q SCG   T+ +T    V++ G   +GQLG+ ++ DR+
Sbjct: 167 AGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRN 226

Query: 526 ITVV 529
             ++
Sbjct: 227 TPMI 230



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 13/268 (4%)

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G    G LG G  ++   P+++++  G+ +K VA G  HTAA+ +            G+
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE-----------DGE 49

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           LF WG    G LG  D   +L+P  V+ +     V  +CG   T+ ++ LG +YT G + 
Sbjct: 50  LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 109

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +GQLG+   +DR +      L+ + +  IS G  H   LT+ G +Y WG N  GQ+G GD
Sbjct: 110 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 169

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHN 632
           + +  +P  ++  +D++V  + CG   T A+   +++    + +  Q  +  G    ++ 
Sbjct: 170 NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQ--LGHGESVDRNT 227

Query: 633 CYNCGLHFCSACSTKKIINASLTPNKGK 660
                      CS ++I ++++ P+ GK
Sbjct: 228 PMILEALSVDGCSGQQIESSNIDPSSGK 255



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 126/236 (53%), Gaps = 14/236 (5%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T  D+L+P+ +++   + ++ ++ GA+H A VT++GE+F WG G+ G LG     D   P
Sbjct: 13  TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP 72

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           + V  + G  +  V+CG   T +++  G +YT+G + +G    G+   R   +P +L + 
Sbjct: 73  QKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRL--VPHRL-EA 129

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           L G  +S+++ G  HT  ++T G+L+ +G   FG +G G+  +   P +++  +  KV  
Sbjct: 130 LRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQ 189

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
           ++CG  HT A+ D      K N     +F+WG    G+LGH +   +  P  +  L
Sbjct: 190 ISCGWRHTLAVTD------KQN-----VFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           V  IS G +H   VT +  VF WG G +G+LGH  ++D + P ++E LS
Sbjct: 187 VIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 235


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 148/323 (45%), Gaps = 20/323 (6%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--LSGINVQSVSCGEFQTC 327
            GA  +  +  +G ++ WG    G LG    +D + P LV+   L    V +V+ G +   
Sbjct: 1492 GASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNL 1551

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVST 386
             L     ++ WGHN  G    G R + ++ LP ++  + L G  V+ V  G++H+ I+  
Sbjct: 1552 VLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDD 1611

Query: 387  SGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRC 444
             G+L+ +G   +G LG G     ++P  V+   L G KV +V+ G  HT A+ +      
Sbjct: 1612 LGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDE------ 1665

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV--TRLVDFDFVQASCGRMLTVGLTGL 502
                  G L+ WG  D GRLG      +  P  V  T L     V  S G   TV L  L
Sbjct: 1666 -----QGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDEL 1720

Query: 503  GKVYTMGSAVHGQLGNPKA--KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G+++  G    G LG+     + R + V    L    V  +S+GS++  V+   G ++ W
Sbjct: 1721 GRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAW 1780

Query: 561  GKNANGQLGLGDSQERETPTFVE 583
            G N+ GQLG G    R  P  V+
Sbjct: 1781 GSNSYGQLGDGTKTRRLKPVRVD 1803



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 18/220 (8%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGINVQSVSC 321
            V  +  G  H+ ++   G ++ WG+ K G LG       + P LV+ L  +G  V +VS 
Sbjct: 1596 VTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSA 1655

Query: 322  GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWH 380
            GE  T AL + G ++ WG N+ G   +G+  +     P ++   +LDG +V  ++ G W+
Sbjct: 1656 GEHHTVALDEQGGLWAWGLNDSGR--LGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWN 1713

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVD 438
            T  +   G+L+ +G    G+LG G   N  +P +V+   L G KV +V+ G ++   +VD
Sbjct: 1714 TVALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYF-FVVD 1772

Query: 439  IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
               DR       G+L+ WG    G+LG     R+L P  V
Sbjct: 1773 ---DR-------GELWAWGSNSYGQLGDGTKTRRLKPVRV 1802



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 28/299 (9%)

Query: 319  VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
            ++ G   +  L     I++WG N  G    G  R R+  +   L   L G  V  ++ G 
Sbjct: 1433 MAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDL-TPLGGSTVVSISTGS 1491

Query: 379  W--HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTA 434
                +  +   G+L+ +G    G LG G   + ++P  V+  SL   KV +VA G +H  
Sbjct: 1492 GASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNL 1551

Query: 435  AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS---- 490
             + D             +L+ WG    G+LG  DG R  +   +   VD + +  S    
Sbjct: 1552 VLDD-----------QSRLWAWGHNGDGQLG--DGTRTNVAYPLPIQVDLEPLAGSTVTG 1598

Query: 491  --CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA--KDRSITVVEGKLKEEFVKGISSGSY 546
               G   ++ L  LG+++  G   +G+LG+     + R + V    L    V  +S+G +
Sbjct: 1599 VWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEH 1658

Query: 547  HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVE--ALRDRQVESVVCGSSITAAI 603
            H   L   G ++ WG N +G+LG G + +R  P  V+  +L   +V ++  G   T A+
Sbjct: 1659 HTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVAL 1717


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 11/239 (4%)

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           A G  H+A V+ +G L+T+G G +G LGH + ++  +PK VE+L+G +V  +ACG     
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
            +     D          +++WGD D G+LG    +   +P  +  L     V+  CG  
Sbjct: 61  TLCLTDDD---------TVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ 111

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
            +V LT  G VYT G   + +LG+      R    V+G L+ + V  I++GS H    T 
Sbjct: 112 FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTE 170

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
            G VYTWG N  GQLG G +   + P  V AL+ ++V  V CGS+ T A    K  S G
Sbjct: 171 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAG 229



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 127/234 (54%), Gaps = 20/234 (8%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC--GEFQ 325
           + G  H+A VT  G+++ WG+G+ GRLGH  + D   PKLVE L G  V  ++C  G+ Q
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T  LT    +++WG  ++G   +G   S    +P K+ D+L G+ V KV CG   +  ++
Sbjct: 61  TLCLTDDDTVWSWGDGDYGK--LGRGGSDGCKVPMKI-DSLTGLGVVKVECGSQFSVALT 117

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
            SG ++T+G G +  LGHG+  +V +P++V+ L+G KV ++A G  H           C 
Sbjct: 118 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH-----------CV 166

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQASCGRMLTV 497
                G+++TWGD D+G+LG  DG    +  P  V  L      + +CG   T+
Sbjct: 167 CCTEDGEVYTWGDNDEGQLG--DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 218



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 25/223 (11%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV-- 277
           D+  WG+G  G          +  + ++ D L PKL+E+     V +I+ G+  A  +  
Sbjct: 15  DLYTWGKGRYG---------RLGHSDSE-DQLKPKLVEALQGHRVVDIACGSGDAQTLCL 64

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T +  V+ WG+G  G+LG   +     P  ++ L+G+ V  V CG   + ALTKSG +YT
Sbjct: 65  TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 124

Query: 338 WGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           WG  +     HG+D    R       PR++   L G +V  +A G  H    +  G+++T
Sbjct: 125 WGKGDYHRLGHGSDDHVRR-------PRQV-QGLQGKKVIAIATGSLHCVCCTEDGEVYT 176

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           +GD   G LG G    + +P+ V +L+G KV  VACG  HT A
Sbjct: 177 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 219



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 108/234 (46%), Gaps = 24/234 (10%)

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--G 377
           + G   +  +T +G++YTWG   +G   +G   S     P KL + L G RV  +AC  G
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGR--LGHSDSEDQLKP-KLVEALQGHRVVDIACGSG 57

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           +  T  ++    ++++GDG +G LG G       P +++SL GL V  V CG   + A+ 
Sbjct: 58  DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 117

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                  KS A+    +TWG  D  RLGH   +    P  V  L     +  + G +  V
Sbjct: 118 -------KSGAV----YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCV 166

Query: 498 GLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
             T  G+VYT G    GQLG    N   + R +  ++GK     V  ++ GS H
Sbjct: 167 CCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK----VNRVACGSAH 216



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 21/214 (9%)

Query: 176 HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKD--VMIWGEGVLGGDI 233
           H ++E+ +K +L  A       + HR+V    GS   +   +  D  V  WG+G  G   
Sbjct: 29  HSDSEDQLKPKLVEA------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 82

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
            G  DG            +P  ++S   L V  +  G++ +  +TK G V+ WG+G   R
Sbjct: 83  RGGSDG----------CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 132

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LGH  +  V  P+ V+ L G  V +++ G       T+ GE+YTWG N+ G   +G+  +
Sbjct: 133 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ--LGDGTT 190

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            +   PR L   L G +V++VACG  HT   STS
Sbjct: 191 NAIQRPR-LVAALQGKKVNRVACGSAHTLAWSTS 223


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 164/344 (47%), Gaps = 38/344 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G +H ++VT+ G+++ +G    G+LG      V+ P  V+ L    V+  +CG   
Sbjct: 39  HISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G N+ G   +G+   RS +     F      ++ ++A G + +A+++
Sbjct: 99  TLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQH--KIKQLAAGSYTSAVLT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             GQL  +GD + G +G G+   VS P +V+   G  V  ++CG +H+A I         
Sbjct: 157 EDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDI--GKPVSCISCGYYHSALITQ------- 207

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G+L+T+G+ + G+LG    + K   LP  V+  +     + +CG   TV L   G
Sbjct: 208 ----DGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG-ISGKVSKVACGGGHTVVL-AEG 261

Query: 504 KVYTMGSAVHGQLGN---------PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            VYT G   +GQLG+         PK  D         L +  +  I+ G  H A++T  
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSEPKTVDH--------LGKHKICHIACGENHTALITEN 313

Query: 555 GSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
           G +YT+G   +G+LGLG+     +  PT         V SV CG
Sbjct: 314 GLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACG 357



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 8/170 (4%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           IS G  H+AL+T++GE++ +GE ++G+LG   K   +   P+LV  +SG  V  V+CG  
Sbjct: 195 ISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGG 253

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            T  L + G++YT+G   +G   +G           K  D L   ++  +ACGE HTA++
Sbjct: 254 HTVVLAE-GDVYTFGLGQYGQ--LGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALI 310

Query: 385 STSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
           + +G ++T+GDG  G LG G  N  N   P    +     V SVACG  H
Sbjct: 311 TENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCH 360



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 27/239 (11%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HT++V+ +G+L+ +G   +G LG G+   V++P  V++L+  KVK  ACG  HT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF-----DFVQ 488
               +            G ++  G   +G+LG  D E +        L+ F        Q
Sbjct: 100 LICTEQ-----------GNVYAAGGNSEGQLGLGDTEER----STFHLISFFTKQHKIKQ 144

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYH 547
            + G   +  LT  G++   G    GQ+G     D++   V  ++   + V  IS G YH
Sbjct: 145 LAAGSYTSAVLTEDGQLVMWGDNSEGQIG---LGDKAYVSVPHQVDIGKPVSCISCGYYH 201

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAIC 604
            A++T  G +YT+G+  NG+LGL   Q    + P  V  +  + V  V CG   T  + 
Sbjct: 202 SALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGK-VSKVACGGGHTVVLA 259


>gi|302854088|ref|XP_002958555.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
 gi|300256130|gb|EFJ40404.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
          Length = 201

 Score =  127 bits (318), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           L+  A+ +DV  ++   +HAAL+T+ GE++ WG GKDG LGH    DV  P+L+  + G 
Sbjct: 2   LVGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGR 61

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            V++V+CGE  + A++    ++ WG    G    G     +   P       D V+V  V
Sbjct: 62  GVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAV 121

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES---LRGLKVKSVACGPW 431
           +CG +HTA ++  G L+T+G+G FG LGHG  ++  +P+       L    V +V+CG W
Sbjct: 122 SCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYW 181

Query: 432 HTAAI 436
           HTAA+
Sbjct: 182 HTAAV 186



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 27/161 (16%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH-W---LPR-KLFDTLDG 368
           ++V  V+C       +T++GE+YTWG        VG+  +  H W   +P+ +L   + G
Sbjct: 9   VDVSRVACAPRHAALITRNGELYTWG--------VGKDGNLGHGWCGDVPKPRLLTRMGG 60

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--ESLRG-LKVKS 425
             V  VACGE  +A +S   +LF +G G  G LG+G     ++P  V    LR  +KV +
Sbjct: 61  RGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLA 120

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
           V+CGP+HTAAI +           GG L+TWG+   GRLGH
Sbjct: 121 VSCGPYHTAAITE-----------GGLLYTWGNGLFGRLGH 150



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 17/194 (8%)

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
           + V  VAC P H A I              G+L+TWG    G LGH        P  +TR
Sbjct: 9   VDVSRVACAPRHAALITR-----------NGELYTWGVGKDGNLGHGWCGDVPKPRLLTR 57

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA---KDRSITVVEGKLKEEF 537
           +        +CG   +  ++   +++  G  + GQLGN  A    + +  +  G   +  
Sbjct: 58  MGGRGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVK 117

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA---LRDRQVESVV 594
           V  +S G YH A +T GG +YTWG    G+LG G  ++   P        L D+ V +V 
Sbjct: 118 VLAVSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVS 177

Query: 595 CGSSITAAICLHKS 608
           CG   TAA+   +S
Sbjct: 178 CGYWHTAAVARPRS 191



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 17/171 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           ++  WG G   G++G    G V +         P+LL       V+ ++ G   +A ++ 
Sbjct: 29  ELYTWGVGK-DGNLGHGWCGDVPK---------PRLLTRMGGRGVRAVACGEGASAAISA 78

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLV---ECLSGINVQSVSCGEFQTCALTKSGEIY 336
           E  +F WG+G  G+LG+      + P  V        + V +VSCG + T A+T+ G +Y
Sbjct: 79  EQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAVSCGPYHTAAITEGGLLY 138

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDT--LDGVRVSKVACGEWHTAIVS 385
           TWG+   G   +G    R  + PR+   +  L+   V  V+CG WHTA V+
Sbjct: 139 TWGNGLFGR--LGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWHTAAVA 187



 Score = 43.9 bits (102), Expect = 0.54,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%)

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           V   +  D  + +C       +T  G++YT G    G LG+    D     +  ++    
Sbjct: 3   VGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRG 62

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS--QERETPTFVEALRDR-QVESVV 594
           V+ ++ G    A +++   ++ WGK   GQLG G +       P     LRD  +V +V 
Sbjct: 63  VRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAVS 122

Query: 595 CGSSITAAI 603
           CG   TAAI
Sbjct: 123 CGPYHTAAI 131


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 158/323 (48%), Gaps = 29/323 (8%)

Query: 266 NISLGAK--HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            +SLGA   H+  +  +G V+ WG    G+LG       + P  V   +G++   ++ GE
Sbjct: 651 GVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF--LAAGE 708

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           F + AL   G  + WG N+ G   +G+  +R H+ P      L G R   +A G+  TA 
Sbjct: 709 FHSVALRTDGTAWAWGSNDKGQ--LGDGSARWHYAPT--LSRLVGAR--GLAAGDRFTAA 762

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
             + G ++ +GD T+G LG G       P +V  L    V+ +A G  H   +V + +D 
Sbjct: 763 RKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLT--DVEGLAAGEGH---VVVVKMD- 816

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++TWG+  KG+LG     R+L+PT V  L     V  + G   ++ L   G
Sbjct: 817 -------GTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTGV--VAVAAGYAHSLALKADG 867

Query: 504 KVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            V+  G  ++GQLG+     R + T  +G      V  ++SG+YH     + G+++ WG 
Sbjct: 868 TVWGWGENIYGQLGDGTTTQRVAPTQAQGL---TVVLSMASGTYHGLARKADGTLWAWGY 924

Query: 563 NANGQLGLGDSQERETPTFVEAL 585
           NA+GQLG+G +  R  PT V +L
Sbjct: 925 NAHGQLGIGTTTTRLAPTLVPSL 947



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 162/347 (46%), Gaps = 29/347 (8%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           +LP L+    + +   +S G+ H+ +   +G  + WG    G+LG       S P+ V  
Sbjct: 239 MLPALVPG--LTNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQQVSG 296

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+G++   V   E  +  L   G ++TWG N  G   +G+       +P ++   L GV 
Sbjct: 297 LAGVD--GVLGAELHSLVLKSDGTVWTWGSNQRGQ--LGDGTQEQRLVPVQVMG-LSGVV 351

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
                 G+ H+  V  +G+++T+G    G LG G+    + PK   +L  ++  SVA G 
Sbjct: 352 AVAAGSGQ-HSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHAL--VERTSVAAGR 408

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
           +H  A         K +   G ++ WGD  KG+LG     ++LLPT V  L +   V  +
Sbjct: 409 YHGLA--------SKPD---GTVWAWGDNAKGQLGDGTTAQRLLPTQVPGLTNM--VAVA 455

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVKGISSGSYHVA 549
            G   ++ L   G V+  G   +GQLGN    DRS  T V G      V  I++G  H  
Sbjct: 456 AGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLTG---VVSIAAGPGHAL 512

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            + + G+++TWG N  GQLG G + +R  PT V  +    V SV  G
Sbjct: 513 AVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTG--VVSVAAG 557



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 159/343 (46%), Gaps = 29/343 (8%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           + T VD  +P  +    +  V +++ G  H+ +V  +G V+ WG   +G+LG        
Sbjct: 533 DGTTVDRPIPTQVPG--VTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRP 590

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            P     L+G  V +++ G + + AL   G ++ WG+N HG   +G   + +  +P ++ 
Sbjct: 591 VPSQTPNLTG--VVAITAGLYHSLALKTDGTVWAWGYNLHGQ--LGNGNTTTQQVPTQVP 646

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
               GV    +  G +H+  + T G ++T+G    G LG G   + + P +V    G  V
Sbjct: 647 GFSGGV---SLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTG--V 701

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
             +A G +H+ A+      R    A     + WG  DKG+LG         PT ++RLV 
Sbjct: 702 SFLAAGEFHSVAL------RTDGTA-----WAWGSNDKGQLGDGSARWHYAPT-LSRLVG 749

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA-KDRSITVVEGKLKEEFVKGIS 542
              + A  G   T      G V+  G   +GQLG+      RS   V G      V+G++
Sbjct: 750 ARGLAA--GDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTD---VEGLA 804

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           +G  HV V+   G+V+TWG NA GQLG G +  R  PT V  L
Sbjct: 805 AGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGL 847



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 151/351 (43%), Gaps = 42/351 (11%)

Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
           K  E+A  L +  ++ G  H   V  +G V+ WG+   G+LG+    D   P  V     
Sbjct: 42  KAAETASRLGL--VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVP--VRAWGL 97

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
            N+ +V  G+  + A+   G ++TWG NN G   +G+  +     P ++    + VR   
Sbjct: 98  WNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQ--LGDGTTTGRQAPVQVPGLGEVVR--- 152

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           VA G  H+  + T G ++ +G    G LG G       P +V+ L    +K++A G  H+
Sbjct: 153 VAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAGNAHS 210

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
            A+              G+++ WG    G+LG      ++LP  V  L +   + A    
Sbjct: 211 LALDGT-----------GRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNH 259

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-------ITVVEGKLKEEFVKGISSGSY 546
            L       G  +  G+  +GQLG+     RS       +  V+G L  E          
Sbjct: 260 SLV--RQADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGVLGAEL--------- 308

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           H  VL S G+V+TWG N  GQLG G  ++R  P  V  L    V +V  GS
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGLSG--VVAVAAGS 357



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 176/424 (41%), Gaps = 83/424 (19%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG    G + G   DG+ +  +  V   +P L E      V  ++ G  H+  +  +
Sbjct: 119 VWTWG----GNNFGQLGDGTTTGRQAPVQ--VPGLGE------VVRVAAGFSHSLALKTD 166

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+ WG    GRLG         P  V+ L    +++++ G   + AL  +G ++ WG 
Sbjct: 167 GTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWGS 224

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N++G   +G+  +    LP  L   L     + ++ G  H+ +    G  + +G  T+G 
Sbjct: 225 NSNGQ--LGDTTAGYRMLP-ALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQ 279

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G   + S P++V  L G  V  V     H+  +        KS+   G ++TWG   
Sbjct: 280 LGDGTTTSRSAPQQVSGLAG--VDGVLGAELHSLVL--------KSD---GTVWTWGSNQ 326

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
           +G+LG    E++L+P  V  L     V A  G+  +V +   G+V+T G  V GQLG   
Sbjct: 327 RGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQH-SVAVMANGEVWTWGHNVEGQLGEGS 385

Query: 521 AK-----DRSITVVE----------------------------GKLKEEFVK-------- 539
           +       RS  +VE                            G+L +            
Sbjct: 386 SSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQV 445

Query: 540 -------GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
                   +++G +    L + G+V+ WG NANGQLG G + +R  PT V  L    V S
Sbjct: 446 PGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLTG--VVS 503

Query: 593 VVCG 596
           +  G
Sbjct: 504 IAAG 507



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 148/336 (44%), Gaps = 27/336 (8%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           +  V +I+ G  HA  V  +G ++ WG+   G+LG    +D   P  V  ++G  V SV+
Sbjct: 498 LTGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTG--VVSVA 555

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G + +  +   G ++ WG N  G    G    R   +P +   T +   V  +  G +H
Sbjct: 556 AGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRP--VPSQ---TPNLTGVVAITAGLYH 610

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +  + T G ++ +G    G LG+GN      P +V    G    S+  G +H+ AI    
Sbjct: 611 SLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSG--GVSLGAGIYHSLAI---- 664

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
               K++   G ++TWG   +G+LG      +  PT V       F+ A  G   +V L 
Sbjct: 665 ----KTD---GSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFLAA--GEFHSVALR 715

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G  +  GS   GQLG+  A+      +    +    +G+++G    A   S G+V+ W
Sbjct: 716 TDGTAWAWGSNDKGQLGDGSARWHYAPTLS---RLVGARGLAAGDRFTAARKSDGTVWAW 772

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           G N  GQLG G +    +P  V  L D  VE +  G
Sbjct: 773 GDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAG 806



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 146/325 (44%), Gaps = 24/325 (7%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
            ++  + ++ G +  A    +G V+ WG+   G+LG    +    P  V  L+  +V+ ++
Sbjct: 747  LVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLT--DVEGLA 804

Query: 321  CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
             GE     +   G ++TWG+N  G   +G+  +    +P ++   L GV    VA G  H
Sbjct: 805  AGEGHVVVVKMDGTVWTWGNNAKGQ--LGDGTTTRRLVPTQV-PGLTGVVA--VAAGYAH 859

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +  +   G ++ +G+  +G LG G       P + + L    V S+A G +H  A     
Sbjct: 860  SLALKADGTVWGWGENIYGQLGDGTTTQRVAPTQAQGLT--VVLSMASGTYHGLA----- 912

Query: 441  VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                K++   G L+ WG    G+LG      +L PT V  L     V  S     ++ L 
Sbjct: 913  ---RKAD---GTLWAWGYNAHGQLGIGTTTTRLAPTLVPSL--SGVVSLSATHQHSLALK 964

Query: 501  GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
              G V+  G   +GQLG+     R +      L    VK +S+G  +   + + G+V++W
Sbjct: 965  PDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSS--VKAVSAGFEYSLAVKADGTVWSW 1022

Query: 561  GKNANGQLGLGDSQERETPTFVEAL 585
            G N  GQLG G +  R TPT V  L
Sbjct: 1023 GINDRGQLGSGTATPRATPTQVAGL 1047



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 133/325 (40%), Gaps = 30/325 (9%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
            + DV+ ++ G  H  +V  +G V+ WG    G+LG         P  V  L+G  V +V+
Sbjct: 797  LTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG--VVAVA 854

Query: 321  CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS-KVACGEW 379
             G   + AL   G ++ WG N +G   +G+  +     P +      G+ V   +A G +
Sbjct: 855  AGYAHSLALKADGTVWGWGENIYGQ--LGDGTTTQRVAPTQA----QGLTVVLSMASGTY 908

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            H       G L+ +G    G LG G       P  V SL G               +V +
Sbjct: 909  HGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSG---------------VVSL 953

Query: 440  MVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                  S A+   G ++ WG    G+LG      + +PT    L     V  S G   ++
Sbjct: 954  SATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSSVKAV--SAGFEYSL 1011

Query: 498  GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
             +   G V++ G    GQLG+  A  R+       L    V  + +   H  V+++ G++
Sbjct: 1012 AVKADGTVWSWGINDRGQLGSGTATPRATPTQVAGLNS--VTLLLAARAHALVVSADGTM 1069

Query: 558  YTWGKNANGQLGLGDSQERETPTFV 582
              +G N  GQLG GD+  R  P  V
Sbjct: 1070 RGFGDNEAGQLGAGDTLIRLAPNQV 1094



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           + GR  T+ +   G V+  G   +GQLGN   +D+ + V    L    +  + +G  H  
Sbjct: 54  AAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWN--ISAVGAGDLHSL 111

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            + S G+V+TWG N  GQLG G +  R+ P  V  L   +V  V  G S + A+
Sbjct: 112 AMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGL--GEVVRVAAGFSHSLAL 163


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 159/351 (45%), Gaps = 25/351 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-----VNMDVSCPKLVECLSGI---- 314
           +  ++ G++ +  +T+EG+V+C G    G+L  +      N        +E + G+    
Sbjct: 75  IVKVAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDC 134

Query: 315 NVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            V  VSC  G      +T +G++Y+ G NNHG   +G  +     L   L ++L  VRV 
Sbjct: 135 KVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLL---LVESLKHVRVL 191

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
             +C   H+ +VS+ G  F++G    G LG G   N   P  VE      V+  ACG +H
Sbjct: 192 SASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYH 251

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T  + +            G +F+ G    G+LG        +PT +  L +      +CG
Sbjct: 252 TIFLTE-----------EGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACG 300

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              T  +   GK++T G    GQLG       S  +    L+   V  IS G++   VL+
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLS 360

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G ++++G N +GQLGLGDS +R  P  V ++  + +  + CG     AI
Sbjct: 361 ESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 21/330 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           VF  G+ + G LGH    +     LV+ L    +  V+ G   +  LT+ G++Y  G N+
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNS 101

Query: 343 HGADLVGE------RRSRSHWLPRKLFDTLD-GVRVSKVAC--GEWHTAIVSTSGQLFTY 393
            G  L  E       RS+ +    +L + L    +V +V+C  G  H  +V+++GQ+++ 
Sbjct: 102 TG-QLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSC 160

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G    G LG G+ +       VESL+ ++V S +C   H+  +           +  G  
Sbjct: 161 GCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVV-----------SSDGSA 209

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           F++G  D G+LG      +LLP  V          A+CG+  T+ LT  G V++ G  ++
Sbjct: 210 FSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLN 269

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG       ++  +   L+E     I+ G  H  V+   G ++T+G N  GQLGLG +
Sbjct: 270 GQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHT 329

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
               +P  VE LR+ +V  + CG+  T  +
Sbjct: 330 DSVSSPMQVETLRNVKVVKISCGTHFTCVL 359



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 14/247 (5%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           L+ES   + V + S    H+ +V+ +G  F +G    G+LG     +   P  VE  S  
Sbjct: 181 LVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPH 240

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            V+  +CG++ T  LT+ G +++ G N +G   +G R S +  +P  L   L     S +
Sbjct: 241 LVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTN--VP-TLIAALQERPASMI 297

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           ACG  HT +V   G+LFT+G    G LG G+  +VS P +VE+LR +KV  ++CG   T 
Sbjct: 298 ACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTC 357

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
            + +            G+L+++G    G+LG  D   +L+P  V  +   +  + +CG  
Sbjct: 358 VLSE-----------SGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFH 406

Query: 495 LTVGLTG 501
             V ++G
Sbjct: 407 HLVAISG 413



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 3/191 (1%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T+ + LLP  +E      V+  + G  H   +T+EG VF  G+  +G+LG       + P
Sbjct: 224 TRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVP 283

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
            L+  L       ++CG   TC + + G+++T+G+N+ G   +G   S S   P ++ +T
Sbjct: 284 TLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSS--PMQV-ET 340

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           L  V+V K++CG   T ++S SG+L+++G    G LG G+  +   P  V S+    +  
Sbjct: 341 LRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSE 400

Query: 426 VACGPWHTAAI 436
           +ACG  H  AI
Sbjct: 401 IACGFHHLVAI 411



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 7/144 (4%)

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
           S++ T V  L+  L E    +    I+ G  H  +V ++G++F +G    G+LG      
Sbjct: 276 SRSSTNVPTLIAALQERPASM----IACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS 331

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           VS P  VE L  + V  +SCG   TC L++SGE++++G N HG   +G+   R   L   
Sbjct: 332 VSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDR---LVPV 388

Query: 362 LFDTLDGVRVSKVACGEWHTAIVS 385
           L  ++    +S++ACG  H   +S
Sbjct: 389 LVPSMTKKNLSEIACGFHHLVAIS 412


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 165/371 (44%), Gaps = 62/371 (16%)

Query: 282 EVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           E+F WG  + G+LG  +  +  S P    C   I ++ VSCG+     +T    +Y+ G 
Sbjct: 83  EIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGS 142

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N +G   VG+   +    P  +   +D   +S +ACG  HT + +  G ++++G G FG 
Sbjct: 143 NTNGQLGVGDMSLKMKNSPMLVEALMDQKPIS-IACGANHTLVCTERGDVYSWGQGIFGA 201

Query: 401 LGHGNLQNVSQPKEVE-SLRGLKVKS----VACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           LG GNL +   PK +  S   L  KS    V+ G    +AI+D            G+++T
Sbjct: 202 LGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAG-MRFSAILDQ----------SGRVYT 250

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
            G  D G+LG    +++ +P  + +  +      +CG+M  + LT  G VY+ G+   GQ
Sbjct: 251 CGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLMLTKQGTVYSCGANSFGQ 309

Query: 516 LGNPKAKDRS------------------------ITVVEGKL---------------KEE 536
           LG    ++ S                        I+   G L               + +
Sbjct: 310 LGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEFLTPHRVK 369

Query: 537 FVKG----ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            +KG    +S G++    +   G VY+WG N +G+LG GD  ER TP  +  L D+ V  
Sbjct: 370 TIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQIINQLNDKIVTL 429

Query: 593 VVCGSSITAAI 603
           V CG + + A+
Sbjct: 430 VSCGRNFSIAL 440



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 47/289 (16%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLE-SAVMLDVQN----ISLGAKHA 274
           DV  WG+G+ G    G +D          D  LPKL+  S   L  ++    +S G + +
Sbjct: 190 DVYSWGQGIFGALGAGNLD----------DQFLPKLIHISHDQLSTKSQMIQVSAGMRFS 239

Query: 275 ALVTKEGEVFCWGEGKDGRLG----HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
           A++ + G V+  G+   G+LG     + N+ +S  K  E +S I     +CG+     LT
Sbjct: 240 AILDQSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPERVSMI-----ACGQMHLLMLT 294

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
           K G +Y+ G N+ G   +  +R+ S  L   L   +  + +  VA G +  +I   SG L
Sbjct: 295 KQGTVYSCGANSFGQLGLNNKRNSSSPL---LIQDISHIPMRYVAAGSFSASISYDSGDL 351

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           + +G G FG            P  V++++G+ V SV+ G     A+              
Sbjct: 352 YLWGSGVFGEF--------LTPHRVKTIKGMTV-SVSIGNHFGIAVNQ-----------D 391

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
           G +++WG  + G LG  D + +  P  + +L D      SCGR  ++ L
Sbjct: 392 GIVYSWGHNNSGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIAL 440


>gi|449662010|ref|XP_002161644.2| PREDICTED: uncharacterized protein LOC100207375 [Hydra
           magnipapillata]
          Length = 677

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 41/311 (13%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
           I +  VS G      ++    I+TWG N+ G   VG+   R+   P ++ ++L G  V  
Sbjct: 37  IQITEVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQ--PTEI-ESLRGKCVIS 93

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           VACG + TA ++ +G + T G G FG LGHG+  +++ PK V+ L  L + S+  G  H 
Sbjct: 94  VACGNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVAGSNHV 153

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD----FVQ- 488
           A                GK++TWG    GR GH   +      C+ +LV F     F+Q 
Sbjct: 154 AITTS-----------DGKVYTWGCGLDGRTGHGTEDN----ICIPKLVSFGNEKVFIQN 198

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPK----------------AKDRSITVVEG 531
             C    TV ++  G ++  GS    +LG NP+                 K +  T+V+ 
Sbjct: 199 VQCSSNGTVFISDAGNLFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKY 258

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
             K + +  +  G+ H  +++  G VYT G+N  GQLG G+ + RE  + V+ L +  V 
Sbjct: 259 SCKYQ-ISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPRELLSNVKGLEEVSVT 317

Query: 592 SVVCGSSITAA 602
           ++ CGSS + A
Sbjct: 318 TIACGSSFSMA 328



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 131/296 (44%), Gaps = 21/296 (7%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + +  +S+G  H A+++ E  +F WG+   G+LG   N   + P  +E L G  V SV+C
Sbjct: 37  IQITEVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQPTEIESLRGKCVISVAC 96

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL---PRKLFDTLDGVRVSKVACGE 378
           G + T  LT +G + T G    G    G+      WL     KL D L  + ++ +  G 
Sbjct: 97  GNYFTAFLTDNGLVLTCGQGEFGCLGHGD------WLSINTPKLVDELMTLDITSLVAGS 150

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIV 437
            H AI ++ G+++T+G G  G  GHG   N+  PK V      + +++V C    T  I 
Sbjct: 151 NHVAITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFIS 210

Query: 438 DI-MVDRCKSNAIGGKL-------FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
           D   +  C SN  G KL       F +    K     V  E+  +PT V     +     
Sbjct: 211 DAGNLFACGSNQ-GNKLGLNPRQGFLYQFRSKSSKNIV--EKAKVPTLVKYSCKYQISTM 267

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
             G      ++  GKVYT G   +GQLG    K R +      L+E  V  I+ GS
Sbjct: 268 QFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPRELLSNVKGLEEVSVTTIACGS 323



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 24/244 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL++  + LD+ ++  G+ H A+ T +G+V+ WG G DGR GH    ++  PKLV   +
Sbjct: 132 PKLVDELMTLDITSLVAGSNHVAITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGN 191

Query: 313 -GINVQSVSCGEFQTCALTKSGEIYTWGHN-------NHGADLVGERRSRS--HWLPRKL 362
             + +Q+V C    T  ++ +G ++  G N       N     + + RS+S  + + +  
Sbjct: 192 EKVFIQNVQCSSNGTVFISDAGNLFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIVEKAK 251

Query: 363 FDTLD----GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
             TL       ++S +  G  H  ++S  G+++T G+  +G LG GNL+       V+ L
Sbjct: 252 VPTLVKYSCKYQISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPRELLSNVKGL 311

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
             + V ++ACG   + A +   +     N I    + WG   + R      ++ ++P   
Sbjct: 312 EEVSVTTIACGSSFSMAGIHTQLKEHPLNLI----YFWGTKPQKR------KKSMIPESN 361

Query: 479 TRLV 482
           ++L+
Sbjct: 362 SKLI 365



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 21/287 (7%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           + +  WG+   G    G  D       T++++L  K         V +++ G    A +T
Sbjct: 56  RGIFTWGDNSFGQ--LGVGDNEPRNQPTEIESLRGKC--------VISVACGNYFTAFLT 105

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G V   G+G+ G LGH   + ++ PKLV+ L  +++ S+  G       T  G++YTW
Sbjct: 106 DNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVAGSNHVAITTSDGKVYTW 165

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G    G    G     +  +P+ +    + V +  V C    T  +S +G LF  G    
Sbjct: 166 GCGLDGR--TGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISDAGNLFACGSNQG 223

Query: 399 GVLGHGNLQNV-------SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             LG    Q         S    VE  +   +   +C   +  + +      C   ++ G
Sbjct: 224 NKLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSCK--YQISTMQFGTSHCTMMSVDG 281

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
           K++T G+ + G+LG  + + + L + V  L +      +CG   ++ 
Sbjct: 282 KVYTNGENEYGQLGCGNLKPRELLSNVKGLEEVSVTTIACGSSFSMA 328



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 44/63 (69%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           +S G  H+AV+++   ++TWG N+ GQLG+GD++ R  PT +E+LR + V SV CG+  T
Sbjct: 42  VSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQPTEIESLRGKCVISVACGNYFT 101

Query: 601 AAI 603
           A +
Sbjct: 102 AFL 104


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 166/342 (48%), Gaps = 35/342 (10%)

Query: 228 VLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWG 287
           V    +G +VD     N    +   P+ + +   L V  +S G +H+  V   G VF WG
Sbjct: 12  VFQTRLGFSVDFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWG 71

Query: 288 EGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
            G +G+LG  +V      PK ++ L+GI +  VSCG++ + AL++ G++++WG N+ G  
Sbjct: 72  AGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQL 131

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG-HGN 405
            +G +   S   P+++  +L+G+ +++VA G  H+  +S SG  F +G+ + G L   GN
Sbjct: 132 GLG-KEFPSQDSPQRV-RSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGN 189

Query: 406 LQNVS--QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
              V   +P+ + +LR L V  ++CG  HTA +              GK+FT+GD   G+
Sbjct: 190 NVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQ-----------NGKVFTFGDNSCGQ 238

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG------ 517
           LGH    +   P  V R +D    Q  CG   T     L  VYT G  V    G      
Sbjct: 239 LGHSPSAQDRGPQLVER-IDGLVSQIDCGSYHT-----LAYVYTTGQVVSFGRGPSCRSS 292

Query: 518 --NPKAK----DRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             +P+A+    D S  +    L +  VK I +G+Y   V TS
Sbjct: 293 STHPEAQIENFDISCLLSAEDLVDVQVKHIFAGTYANFVTTS 334



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 27/264 (10%)

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKV 423
           TL+ +RVS V+CG+ H+  V   G++F +G G+ G LG G ++ ++  PK++++L G+K+
Sbjct: 42  TLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKI 101

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLV 482
             V+CG +H+ A+ +           GG++F+WG   +G+LG   +   +  P  V  L 
Sbjct: 102 IQVSCGDYHSLALSE-----------GGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLE 150

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GN----PKAKDRSITVVEGKLKE 535
                Q + G   +  L+  G  +  G+   GQL   GN       K RSI    G L+ 
Sbjct: 151 GIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSI----GALRN 206

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
             V  IS G  H AVLT  G V+T+G N+ GQLG   S +   P  VE + D  V  + C
Sbjct: 207 LGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERI-DGLVSQIDC 265

Query: 596 GSSITAAICLH--KSISVGDQSSC 617
           GS  T A      + +S G   SC
Sbjct: 266 GSYHTLAYVYTTGQVVSFGRGPSC 289



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 28/225 (12%)

Query: 406 LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           L+    P+ + +L  L+V  V+CG  H+ A+       C      G++F WG   +G+LG
Sbjct: 31  LEETKNPEPIRTLETLRVSLVSCGQEHSLAV-------CHR----GRVFAWGAGSEGQLG 79

Query: 466 HVDGERK---LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-- 520
              GE K     P  +  L     +Q SCG   ++ L+  G+V++ G    GQLG  K  
Sbjct: 80  --TGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEF 137

Query: 521 -AKD--RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--- 574
            ++D  + +  +EG      +  +++G  H   L+  G+ + WG N+ GQL L  +    
Sbjct: 138 PSQDSPQRVRSLEGIP----LAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPV 193

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           +   P  + ALR+  V  + CG   TA +  +  +     +SC Q
Sbjct: 194 QSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQ 238


>gi|412992585|emb|CCO18565.1| predicted protein [Bathycoccus prasinos]
          Length = 1257

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 197/481 (40%), Gaps = 126/481 (26%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           KD+ +WG      +  G  DG  +        LLP + +    LD   +S G  H   ++
Sbjct: 408 KDIYVWG------NFQGEDDGENTN-------LLPSMHKGFEHLDPIKVSAGRAHFVGIS 454

Query: 279 KEGEVFCWGEGKDGRLGHKVN------------MDVSCP-------KLVECLSGINVQSV 319
           K G ++ WG+ +  + G  V             M +S P       + V+C         
Sbjct: 455 KGGFLYFWGDKQRFQCGDAVTTGFHDKPNVSHPMKLSFPTDDIHRTEFVDC--------- 505

Query: 320 SCGEFQTCALTKSGEIYTWG--------HNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +CG+  + ALT+ GEI  WG            G    G +R  S  +P  L + +   +V
Sbjct: 506 ACGDDYSLALTRDGEIKAWGATGWVEKGSTGRGGSF-GSKRIIS--VPVSL-ECVGARKV 561

Query: 372 SKVACGEWHTAIVSTSGQ-LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACG 429
           SK+ACG  H A +   G+ ++T+G+G F  LGHGN  + +++PK VE+L G  V +++CG
Sbjct: 562 SKIACGPVHCAAICDYGESVYTWGEGVFYALGHGNDSRTLAKPKRVEALVGKTVTAISCG 621

Query: 430 PWHTAAIVDIMVDRCKSN----------------AIGGKLFTWGDADKGRLGHVDGERKL 473
            WHT A V    +R   N                A GG ++ WGD  +G+LG    +   
Sbjct: 622 AWHTVACVATNTNRTGGNSLNLANYRSSGVDMVDAFGGDVYVWGDGSEGQLGRRVEKAIK 681

Query: 474 LPTCV-------------------------TRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           +PT +                            V    ++ +CG   T+ L+  G V+  
Sbjct: 682 VPTKIYIENDTPSALRNASNADENLVVPERVANVSTSIIKVACGAAYTILLSINGDVF-- 739

Query: 509 GSAVHGQLGNPKAKDRSIT--VVEGKLKEEF-VKGISSGSYHVAVLTSGGSV-------- 557
              + G+LG   +K   I   +   K+  +  V  I++G+ H     S  SV        
Sbjct: 740 ---ISGKLGKYSSKTFEIIPELSRSKIGNDLVVTRIAAGTDHCLFAASSTSVMPTSYTAR 796

Query: 558 --------------YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
                         +  G N  G++G G  +E   P  +E L    ++S+ CG S++AAI
Sbjct: 797 KGDGKKREKRSAKLFAIGGNKFGKIGDGTLREAAVPIEIEKLSGMSIKSLACGGSVSAAI 856

Query: 604 C 604
            
Sbjct: 857 V 857



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 133/327 (40%), Gaps = 58/327 (17%)

Query: 272 KHAAL-VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
           K AAL   +  +++ WG  +    G   N+  S  K  E L  I V   S G      ++
Sbjct: 398 KTAALSFLRPKDIYVWGNFQGEDDGENTNLLPSMHKGFEHLDPIKV---SAGRAHFVGIS 454

Query: 331 KSGEIYTWGHNNHG--ADLVG----ERRSRSHWLPRKL-FDTLDGVRVSKV--ACGEWHT 381
           K G +Y WG        D V     ++ + SH  P KL F T D  R   V  ACG+ ++
Sbjct: 455 KGGFLYFWGDKQRFQCGDAVTTGFHDKPNVSH--PMKLSFPTDDIHRTEFVDCACGDDYS 512

Query: 382 AIVSTSGQLFTYG------DGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
             ++  G++  +G       G+ G  G  G+ + +S P  +E +   KV  +ACGP H A
Sbjct: 513 LALTRDGEIKAWGATGWVEKGSTGRGGSFGSKRIISVPVSLECVGARKVSKIACGPVHCA 572

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGR 493
           AI D           G  ++TWG+     LGH +  R L  P  V  LV       SCG 
Sbjct: 573 AICDY----------GESVYTWGEGVFYALGHGNDSRTLAKPKRVEALVGKTVTAISCGA 622

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             TV         T G++++  L N +                     SSG   V     
Sbjct: 623 WHTVACVATNTNRTGGNSLN--LANYR---------------------SSGVDMVDAF-- 657

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPT 580
           GG VY WG  + GQLG    +  + PT
Sbjct: 658 GGDVYVWGDGSEGQLGRRVEKAIKVPT 684



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 9/72 (12%)

Query: 944  SKVARTEPQQKGTKASKLEYAEQYEPGIYITFTTLPSGQKGLKRVRFSRRRFT-EKAAER 1002
            SK   TE + K        + E+ EPG+++TFT L + +  + RV+F+RR F  E    +
Sbjct: 1186 SKTTMTETENK--------WVEEIEPGVFLTFTKLDALRTTVTRVQFARRVFANETQGLK 1237

Query: 1003 WWEENQVVVYQK 1014
            WW+EN+  ++++
Sbjct: 1238 WWQENRARIFRE 1249


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 167/346 (48%), Gaps = 44/346 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G +H A++T   +++ +G    G+LG      VS P  V+ L    V+  +CG   T
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             LT+ G++Y  G NN G   +G+   R+ + P   F +    ++ +++ G   +A ++ 
Sbjct: 145 LVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQH--QLKQLSAGSNTSAALTV 202

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G LF +GD + G +G  N+ NV  P +V    G  +  ++CG +H+A +          
Sbjct: 203 DGNLFMWGDNSEGQIGLKNVPNVCVPHQV--TVGKPIAWISCGYYHSAFVT--------- 251

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
             + G+L+T+G+ + G+LG     R+LL     P  V  + +   +Q +CG   TV LT 
Sbjct: 252 --MEGELYTFGETECGKLGL---PRQLLMNHKVPQLVPGIPE-KVIQVACGGGHTVVLTE 305

Query: 502 LGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              VYT G    GQLG          PK       ++E  +K++ +  IS G  H A++T
Sbjct: 306 KA-VYTFGLGQFGQLGLGTFIFETAEPK-------ILE-PIKDQKIIYISCGENHTALIT 356

Query: 553 SGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
             G +YT+G   +G+LGLG  +   +  PT         VE V CG
Sbjct: 357 DVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACG 402



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 62/317 (19%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G          E      W    +         + +ACG+ HTAI++ + +L+
Sbjct: 56  SGAVFTFGKTK-----FAENIPSKFWFKNDI--------PTYLACGDEHTAIITGNNKLY 102

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD------------- 438
            +G   +G LG G+   VS+P  V++L+  KVK  ACG  HT  + +             
Sbjct: 103 MFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162

Query: 439 -----IMVDR-------------------CKSN-----AIGGKLFTWGDADKGRLGHVDG 469
                   DR                     SN      + G LF WGD  +G++G  + 
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNV 222

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA--KDRSIT 527
               +P  VT  V       SCG   +  +T  G++YT G    G+LG P+    +  + 
Sbjct: 223 PNVCVPHQVT--VGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVP 280

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFVEALR 586
            +   + E+ ++ ++ G  H  VLT   +VYT+G    GQLGLG    E   P  +E ++
Sbjct: 281 QLVPGIPEKVIQ-VACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFIFETAEPKILEPIK 338

Query: 587 DRQVESVVCGSSITAAI 603
           D+++  + CG + TA I
Sbjct: 339 DQKIIYISCGENHTALI 355



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 32/263 (12%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGINVQSVSC 321
           V+  + G  H  ++T+EG+V+  G   +G+LG     D +    + C   S   ++ +S 
Sbjct: 134 VKFAACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPI-CFFTSQHQLKQLSA 192

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   + ALT  G ++ WG N+ G   +G +   +  +P ++     G  ++ ++CG +H+
Sbjct: 193 GSNTSAALTVDGNLFMWGDNSEGQ--IGLKNVPNVCVPHQV---TVGKPIAWISCGYYHS 247

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           A V+  G+L+T+G+   G LG     L N   P+ V  +   KV  VACG  HT  + + 
Sbjct: 248 AFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPE-KVIQVACGGGHTVVLTEK 306

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLG-----HVDGERKLLPTCVTRLVDFDFVQASCGRM 494
            V            +T+G    G+LG         E K+L      + D   +  SCG  
Sbjct: 307 AV------------YTFGLGQFGQLGLGTFIFETAEPKIL----EPIKDQKIIYISCGEN 350

Query: 495 LTVGLTGLGKVYTMGSAVHGQLG 517
            T  +T +G +YT G   HG+LG
Sbjct: 351 HTALITDVGLMYTFGDGRHGKLG 373


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 35/323 (10%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECL 311
           P+ +++ V L V  +S G +H+  V  +G+VF WG G DG+LG  K       P+ ++ L
Sbjct: 72  PEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL 131

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  +SCG + + AL+K G++++WG N+HG   +G+    S   P+++  +L+G+ +
Sbjct: 132 TGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP-SQASPQRV-RSLEGIPL 189

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVL---GHGNLQNVSQPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G+ + G L   G+  L    +P+ V +L+ L V  ++C
Sbjct: 190 AQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISC 249

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +               ++FT+GD   G+LGH    +   P  V   +     Q
Sbjct: 250 GYEHTAVLTQ-----------NDQVFTFGDNSFGQLGHNGVSQTTGPQLVEG-IGGPVSQ 297

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVH-----GQLGNP-------KAKDRSITVVEGKLKEE 536
             CG   T     L  VYT G  V          NP       +  D S  +    L++ 
Sbjct: 298 IDCGSYHT-----LAYVYTTGQVVSFGREPSHTSNPTHPETPSENSDISCLISADDLRDI 352

Query: 537 FVKGISSGSYHVAVLTSGGSVYT 559
            +K I +G+Y   V T  G+  T
Sbjct: 353 QIKHIFAGTYADFVTTHQGTCST 375



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 161/344 (46%), Gaps = 35/344 (10%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +HA L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 37  GERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAV 96

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G+++ WG  + G    G+      ++P+K+   L G+++ +++CG +H+  +S  GQ
Sbjct: 97  CHKGKVFAWGVGSDGQLGTGKFEEIC-FIPQKI-KALTGIKIIQISCGYYHSLALSKDGQ 154

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 155 VFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 203

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG+   G+L    G   L+    P  V  L +   V  SCG   T  LT   +
Sbjct: 204 LSGTSFGWGNNSAGQLA-FSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQ 262

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG N  ++     +VEG      V  I  GSYH +A + + G V ++G+
Sbjct: 263 VFTFGDNSFGQLGHNGVSQTTGPQLVEGIGGP--VSQIDCGSYHTLAYVYTTGQVVSFGR 320

Query: 563 NANGQLGLGDSQERETPT---------FVEALRDRQVESVVCGS 597
             +      +    ETP+           + LRD Q++ +  G+
Sbjct: 321 EPSHT---SNPTHPETPSENSDISCLISADDLRDIQIKHIFAGT 361



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 25/253 (9%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           + A GE H  ++ T+  +   GD + G LG     +  QP+ +++L  L V  V+CG  H
Sbjct: 33  QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEH 92

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK-LLPTCVTRLVDFDFVQASC 491
           + A+       C      GK+F WG    G+LG    E    +P  +  L     +Q SC
Sbjct: 93  SLAV-------CHK----GKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISC 141

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           G   ++ L+  G+V++ G   HGQLG       +A  + +  +EG      +  +++G  
Sbjct: 142 GYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIP----LAQVAAGGA 197

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   L+  G+ + WG N+ GQL    +    +   P  V AL++  V  + CG   TA +
Sbjct: 198 HSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVL 257

Query: 604 CLHKSI-SVGDQS 615
             +  + + GD S
Sbjct: 258 TQNDQVFTFGDNS 270


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 19/312 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           V NIS    HAA VT+ GEVF  G+      GH +V   +  P  ++ L GI+ + V+ G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T  LT  G++YT G N HG    G+   R+     +LF+ L    V +VA G  +T 
Sbjct: 217 LSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGL--APVVQVAAGASYTF 274

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDIM 440
            V+  G ++++G  T   LGHG+  +  +P+ ++S   R + V  V+ G  H  A+  + 
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL- 333

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                     G ++TWG    G LGH D   K  P  ++ L     VQ    +  T  LT
Sbjct: 334 ----------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLT 383

Query: 501 GLGKVYTMGSAVHGQLGNPK--AKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
             G V+  G    G LG P   + D+ +   V   L++ +V  IS+G YH   +T+ G V
Sbjct: 384 DEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIV 443

Query: 558 YTWGKNANGQLG 569
           + +G N   QLG
Sbjct: 444 FGFGDNERAQLG 455



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 151/345 (43%), Gaps = 23/345 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINVQSVSCGEF 324
           ++ G  H  LV  +  V+  G    G LGH  +    C     V   S   V ++S    
Sbjct: 108 VATGRYHTLLV-HDSSVYSCGSSLCGVLGHGPDT-TQCAAFSRVPFPSLSRVVNISASHN 165

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
               +T+ GE++T G N+      GE   R+ + P ++   L G+   +VA G   T I+
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEV-GRTIFRPTEI-KALKGISCKQVATGLSFTVIL 223

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDR 443
           +T GQ++T G  T G LGHG+  + + PK VE   GL  V  VA G  +T A+ D     
Sbjct: 224 TTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD----- 278

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRMLTVGLTG 501
                  G ++++G      LGH D   +L P  +      +   V+ S G    V L  
Sbjct: 279 ------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDA 332

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           LG VYT G    G LG+    D++   +   LK +    + +      VLT  GSV+ +G
Sbjct: 333 LGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFG 392

Query: 562 KNANGQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               G LG    G S +   P  +++LRD  V  +  G   T A+
Sbjct: 393 WMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 22/300 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +++   +  + ++ G     ++T +G+V+  G    G+LGH   +D + PK+VE   
Sbjct: 199 PTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFE 258

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
           G+  V  V+ G   T A+T  G +Y++G   +    +G         PR +  F   + +
Sbjct: 259 GLAPVVQVAAGASYTFAVTDDGTVYSFGSCTN--FCLGHGDQHDELRPRAIQSFKRRN-I 315

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V +V+ G+ H   +   G ++T+G G  G LGHG+  + + P+ + SL+      V   
Sbjct: 316 HVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCAR 375

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
              T  + D            G +F +G    G LG  D    ++ + P  +  L D   
Sbjct: 376 KRKTFVLTD-----------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYV 424

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSG 544
            Q S G   TV +T  G V+  G     QLG    +   +   ++  K  EE V    SG
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIAAPSG 484



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 23/228 (10%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +VA G +HT +V  S  +++ G    GVLGHG +    +    V      +V +++    
Sbjct: 107 QVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
           H A + ++           G++FT GD      GH +  R +  PT +  L      Q +
Sbjct: 166 HAAFVTEL-----------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVA 214

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-----VKGISSGS 545
            G   TV LT  G+VYT GS  HGQLG+    DR+      K+ E F     V  +++G+
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATP----KIVELFEGLAPVVQVAAGA 270

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
            +   +T  G+VY++G   N  LG GD  +   P  +++ + R +  V
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+ ++S     + V  +S G +HA  +   G V+ WG G  G LGH    D + 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L       V   + +T  LT  G ++ +G    G+    +R S    +  ++ D
Sbjct: 358 PELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLD 417

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L    VS+++ G +HT  V+  G +F +GD     LG   ++   +P E+
Sbjct: 418 SLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI 468


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 33/354 (9%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
           ++T+ G ++ +G    G+LG      V+ P  V+ L    V  ++CG   T ALTK   +
Sbjct: 44  VITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHL 103

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           +++G    G   VG+  S+ +  PR + + L+      ++CG  H+A ++ SG L+ +G 
Sbjct: 104 HSFGAGGEGQLGVGD--SKQYEAPR-MIEELEEQDYLLLSCGTDHSAALTASGTLYMWGG 160

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+ G LGHG    V  P+E+    G+ V+ V+CG +HTA + +   D+        KL+T
Sbjct: 161 GSEGQLGHGEDTEVQIPRELS--MGVPVRMVSCGYYHTALLTE---DK--------KLYT 207

Query: 456 W-------GDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           +           +  LG V+  + +  +  T  VD      SCG   T  +T  G VYT 
Sbjct: 208 FGEGEGGKLGLGEAHLGGVNEPQHV--SFFTEPVD----SVSCGNAHTAAITEKGHVYTF 261

Query: 509 GSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
           G+   GQLG+ P   + +I     +L+    K +S G  H A++T+ G +YT+G   +G+
Sbjct: 262 GNGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGK 321

Query: 568 LGLGDSQERE--TPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           LG G+       TP+ V       VE V CG   T  +   +    GD +S S+
Sbjct: 322 LGQGEESFSNVFTPSKVHRFNGFLVEEVSCGGCHT-LVRARRRAPPGDPASDSE 374



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 22/245 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+++E     D   +S G  H+A +T  G ++ WG G +G+LGH  + +V  P+  E   
Sbjct: 125 PRMIEELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPR--ELSM 182

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           G+ V+ VSCG + T  LT+  ++YT+G    G   +GE        P+ +  +     V 
Sbjct: 183 GVPVRMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHV--SFFTEPVD 240

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
            V+CG  HTA ++  G ++T+G+G  G LGHG +    + PK V  L   + K V+CG  
Sbjct: 241 SVSCGNAHTAAITEKGHVYTFGNGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDC 300

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK----LLPTCVTRLVDFDFV 487
           HTA +              G L+T+GD   G+LG   GE        P+ V R   F   
Sbjct: 301 HTAIVT-----------AKGCLYTFGDGRHGKLGQ--GEESFSNVFTPSKVHRFNGFLVE 347

Query: 488 QASCG 492
           + SCG
Sbjct: 348 EVSCG 352



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 128/257 (49%), Gaps = 20/257 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G  H   +TK+  +  +G G +G+LG   +     P+++E L   +   +SCG 
Sbjct: 84  VVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGT 143

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + ALT SG +Y WG  + G   +G        +PR+L     GV V  V+CG +HTA+
Sbjct: 144 DHSAALTASGTLYMWGGGSEGQ--LGHGEDTEVQIPRELS---MGVPVRMVSCGYYHTAL 198

Query: 384 VSTSGQLFTY--GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           ++   +L+T+  G+G    LG  +L  V++P+ V S     V SV+CG  HTAAI +   
Sbjct: 199 LTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHV-SFFTEPVDSVSCGNAHTAAITEK-- 255

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                    G ++T+G+   G+LGH  D     +P  V RL        SCG   T  +T
Sbjct: 256 ---------GHVYTFGNGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVT 306

Query: 501 GLGKVYTMGSAVHGQLG 517
             G +YT G   HG+LG
Sbjct: 307 AKGCLYTFGDGRHGKLG 323



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 12/191 (6%)

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCV 478
           L    + C P+      D+++         G+L+ +G  D G+LG   G RK +  P+ V
Sbjct: 25  LSFPELNCSPFPFLFFFDVVITE------NGRLYVFGANDWGQLGL--GHRKSVNKPSSV 76

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
             L     V+ +CGR+ T+ LT    +++ G+   GQLG   +K      +  +L+E+  
Sbjct: 77  KGLKHAGVVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDY 136

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             +S G+ H A LT+ G++Y WG  + GQLG G+  E + P   E      V  V CG  
Sbjct: 137 LLLSCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPR--ELSMGVPVRMVSCGYY 194

Query: 599 ITAAICLHKSI 609
            TA +   K +
Sbjct: 195 HTALLTEDKKL 205


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 149/299 (49%), Gaps = 23/299 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  +NV  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGELKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           V+T G    GQLG +P  + R   +VE  + +  V  +  GSYH +A + + G V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 27/313 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L+V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V  ++D   
Sbjct: 242 SCGAEHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLV-EIIDGLV 289

Query: 487 VQASCGRMLTVGL---TGLGKVYTMGSAVHGQLGNPKAK----DRSITVVEGKLKEEFVK 539
            Q  CG   T+     TG    +  G +  G+  +P+A     D S  +    L    VK
Sbjct: 290 SQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVK 349

Query: 540 GISSGSYHVAVLT 552
            I +G+Y   V T
Sbjct: 350 HIFAGTYANFVTT 362



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +        +  E   G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--ADSRELQR--------RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R +    LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAPRGELPEPI-QALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G L+ +S  PK++ +L G+K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GELKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G+ H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  V CGS  T A
Sbjct: 277 RGPQLVEII-DGLVSQVDCGSYHTLA 301



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG  HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  V CG +HT A V
Sbjct: 280 QLVEIIDGL-VSQVDCGSYHTLAYV 303



 Score = 39.7 bits (91), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           EG    E ++  +SG  H  +L +   V + G N+ GQLG   +   E P  ++AL    
Sbjct: 18  EGSPGAELLQA-ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLN 76

Query: 590 VESVVCGSSITAAICLHK 607
           V+ V CG   + A+C HK
Sbjct: 77  VDLVSCGKEHSLAVC-HK 93


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 24/329 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           + +IS G  ++  +  +G V+ WG+   G+LG     D +    V  L G  V +++CG 
Sbjct: 327 IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGV 384

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL   G ++TWG N  G    G + S++  +P      LDG+    + CG  H+  
Sbjct: 385 NHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVP---ISGLDGII--AITCGTSHSMA 439

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +   G ++ +GD  +G LG+G   + + P +V +L G  +KS+ CG   + A+       
Sbjct: 440 LKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCGYSTSFAL------- 490

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
            K +   G ++ WG+ + G LG     R + PT    + D   +  S G    + L   G
Sbjct: 491 -KPD---GTVWAWGNNEYGELGKGFTTRVIYPTETLNIGDIKAI--SIGSSHCLALKNDG 544

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  G   +GQLG+     +S+ V    +    +  IS+G  H   L S G+V+ WG+N
Sbjct: 545 TVWAWGDNRYGQLGDGTTTIKSLPVQVSGISG--ITAISAGGSHSLALKSDGTVWAWGQN 602

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVES 592
             GQLG G  ++R TP  V  L    V S
Sbjct: 603 NVGQLGDGTKEDRNTPVQVSELSGITVIS 631



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 28/338 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G  H   +  +G V+  GE   G+LG+   +D++ P  VE L+   V S+S G++ +
Sbjct: 180 VSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGKYYS 237

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL   G ++TWG N++G   +G+  + +   P ++   L G+    ++ G  H+  +  
Sbjct: 238 MALKSDGTVWTWGENDYGQ--LGDGTTATRLSPVQV-QNLSGII--AISSGNSHSLALKD 292

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++ +GD   G LG G   +   P +V+ L G  + S++CG +++ A+ +        
Sbjct: 293 DGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSG--IVSISCGFYYSMALKN-------- 342

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKV 505
               G ++ WGD   G+LG  DG      T V  +   D V A +CG   ++ L   G V
Sbjct: 343 ---DGTVWVWGDNTSGQLG--DGTTTDRNTAV-PVSGLDGVIAIACGVNHSMALRNDGTV 396

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +T G    GQLG+     ++  V    L  + +  I+ G+ H   L   G+V+ WG N  
Sbjct: 397 WTWGFNAFGQLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALKDDGTVWAWGDNQY 454

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG G      TP+ V  L    ++S+ CG S + A+
Sbjct: 455 GQLGNGTFISNTTPSQVSNL--SGIKSIFCGYSTSFAL 490



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 158/355 (44%), Gaps = 28/355 (7%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           N   +D   P  +E   +  V +IS G  ++  +  +G V+ WGE   G+LG        
Sbjct: 209 NNNTIDINSPIPVEG--LNKVSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL 266

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            P  V+ LSGI   ++S G   + AL   G ++ WG N  G   +G+  + S ++P ++ 
Sbjct: 267 SPVQVQNLSGI--IAISSGNSHSLALKDDGTVWAWGDNESGQ--LGDGTTNSKYIPSQV- 321

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             L G+    ++CG +++  +   G ++ +GD T G LG G   + +    V  L G  V
Sbjct: 322 QGLSGIV--SISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--V 377

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
            ++ACG  H+ A+ +            G ++TWG    G+LG  DG +    T V     
Sbjct: 378 IAIACGVNHSMALRN-----------DGTVWTWGFNAFGQLG--DGTKVSKNTAVPISGL 424

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              +  +CG   ++ L   G V+  G   +GQLGN      +       L    +K I  
Sbjct: 425 DGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFC 482

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
           G      L   G+V+ WG N  G+LG G +     PT  E L    ++++  GSS
Sbjct: 483 GYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT--ETLNIGDIKAISIGSS 535



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 21/227 (9%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + KV+ GE HT  + + G ++  G+  +G LG+ N  +++ P  VE L   KV S++ G 
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGK 234

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
           +++ A+        KS+   G ++TWG+ D G+LG      +L P  V  L     +  S
Sbjct: 235 YYSMAL--------KSD---GTVWTWGENDYGQLGDGTTATRLSPVQVQNLS--GIIAIS 281

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVA 549
            G   ++ L   G V+  G    GQLG+     + I + V+G      +  IS G Y+  
Sbjct: 282 SGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGL---SGIVSISCGFYYSM 338

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            L + G+V+ WG N +GQLG G + +R T   V  L    V ++ CG
Sbjct: 339 ALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL--DGVIAIACG 383



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 79/358 (22%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           D++ IS+G+ H   +  +G V+ WG+ + G+LG       S P  V  +SGI   ++S G
Sbjct: 526 DIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGI--TAISAG 583

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSR---------------SHWLPRKLFDTLD 367
              + AL   G ++ WG NN G    G +  R               S+ + R      D
Sbjct: 584 GSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKND 643

Query: 368 G--------------------VRVS------KVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           G                    +++S       + CG +H   +   G ++ +G   FG  
Sbjct: 644 GTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQF 703

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           G G     + P +V  L G  VK++A G   + A+        KS+   G ++ WG    
Sbjct: 704 GDGTTTTTNIPVQVSGLSG--VKAIAVGGNRSIAL--------KSD---GTVWQWG---- 746

Query: 462 GRLGHVDGERKLL---PTCV---TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
                    R L+   P+ V   T     D +         V L   GKV+T G+  +GQ
Sbjct: 747 ---------RILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQ 797

Query: 516 LGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           LG+     R ++  V G    E V G++S      VL + G++  WGKN  GQLG G+
Sbjct: 798 LGDGTTTARVTVAPVSGL---EGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGNGE 852



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 7/167 (4%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G ++  G+ D G+LG+ +      P  V  L     + A  G+  ++ L   G V+T G 
Sbjct: 194 GTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSISA--GKYYSMALKSDGTVWTWGE 251

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
             +GQLG+     R   V    L    +  ISSG+ H   L   G+V+ WG N +GQLG 
Sbjct: 252 NDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLALKDDGTVWAWGDNESGQLGD 309

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV-GDQSS 616
           G +  +  P+ V+ L    + S+ CG   + A+    ++ V GD +S
Sbjct: 310 GTTNSKYIPSQVQGL--SGIVSISCGFYYSMALKNDGTVWVWGDNTS 354



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 41/228 (17%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I  G  H   +  +G V+ WG+   G+ G       + P  V  LSG  V++++ G  ++
Sbjct: 676 IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSG--VKAIAVGGNRS 733

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTL-DGVRVSKVACGEWHTAIV 384
            AL   G ++ WG       LV    S    W   +  D L + V +S       +   +
Sbjct: 734 IALKSDGTVWQWGR-----ILVSVSPSTVETWTTARQVDGLSEIVSIS-------NNVAL 781

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
              G++FT+G   +G LG G          V  L G  V  VA     T ++V +M D  
Sbjct: 782 KNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEG--VAGVASS--DTTSMV-LMND-- 834

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                 G +  WG  + G+LG+  GER            +D+ + S G
Sbjct: 835 ------GTIRAWGKNNFGQLGN--GERGF----------YDYAEYSFG 864


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 149/299 (49%), Gaps = 23/299 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  +NV  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGELKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
           V+T G    GQLG +P  + R   +VE  + +  V  +  GSYH +A + + G V ++G
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 27/313 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L+V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V  ++D   
Sbjct: 242 SCGAEHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLV-EIIDGLV 289

Query: 487 VQASCGRMLTVGL---TGLGKVYTMGSAVHGQLGNPKAK----DRSITVVEGKLKEEFVK 539
            Q  CG   T+     TG    +  G +  G+  +P+A     D S  +    L    VK
Sbjct: 290 SQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVK 349

Query: 540 GISSGSYHVAVLT 552
            I +G+Y   V T
Sbjct: 350 HIFAGTYANFVTT 362



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +        +  E   G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--ADSRELQR--------RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R +    LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAPRGELPEPI-QALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G L+ +S  PK++ +L G+K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GELKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G+ H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  V CGS  T A
Sbjct: 277 RGPQLVEII-DGLVSQVDCGSYHTLA 301



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG  HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  V CG +HT A V
Sbjct: 280 QLVEIIDGL-VSQVDCGSYHTLAYV 303



 Score = 39.7 bits (91), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           EG    E ++  +SG  H  +L +   V + G N+ GQLG   +   E P  ++AL    
Sbjct: 18  EGSPGAELLQA-ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLN 76

Query: 590 VESVVCGSSITAAICLHK 607
           V+ V CG   + A+C HK
Sbjct: 77  VDLVSCGKEHSLAVC-HK 93


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 19/312 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           V NIS    HAA VT+ GEVF  G+      GH +V   +  P  ++ L GI+ + V+ G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T  LT  G++YT G N HG    G+   R+     +LF+ L    V +VA G  +T 
Sbjct: 217 LSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGL--APVVQVAAGASYTF 274

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDIM 440
            V+  G ++++G  T   LGHG+  +  +P+ ++S   R + V  V+ G  H  A+  + 
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL- 333

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                     G ++TWG    G LGH D   K  P  ++ L     VQ    +  T  LT
Sbjct: 334 ----------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLT 383

Query: 501 GLGKVYTMGSAVHGQLGNPK--AKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
             G V+  G    G LG P   + D+ +   V   L++ +V  IS+G YH   +T+ G V
Sbjct: 384 DEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIV 443

Query: 558 YTWGKNANGQLG 569
           + +G N   QLG
Sbjct: 444 FGFGDNERAQLG 455



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 151/345 (43%), Gaps = 23/345 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL--VECLSGINVQSVSCGEF 324
           ++ G  H  LV  +  V+  G    G LGH  +    C     V   S   V ++S    
Sbjct: 108 VATGRYHTLLV-HDSSVYSCGSSLCGVLGHGPDT-TQCAAFSRVPFPSLSRVVNISASHN 165

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
               +T+ GE++T G N+      GE   R+ + P ++   L G+   +VA G   T I+
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEV-GRTIFRPTEI-KALKGISCKQVATGLSFTVIL 223

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDR 443
           +T GQ++T G  T G LGHG+  + + PK VE   GL  V  VA G  +T A+ D     
Sbjct: 224 TTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD----- 278

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRMLTVGLTG 501
                  G ++++G      LGH D   +L P  +      +   V+ S G    V L  
Sbjct: 279 ------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDA 332

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           LG VYT G    G LG+    D++   +   LK +    + +      VLT  GSV+ +G
Sbjct: 333 LGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFG 392

Query: 562 KNANGQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               G LG    G S +   P  +++LRD  V  +  G   T A+
Sbjct: 393 WMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 22/300 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +++   +  + ++ G     ++T +G+V+  G    G+LGH   +D + PK+VE   
Sbjct: 199 PTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFE 258

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
           G+  V  V+ G   T A+T  G +Y++G   +    +G         PR +  F   + +
Sbjct: 259 GLAPVVQVAAGASYTFAVTDDGTVYSFGSCTN--FCLGHGDQHDELRPRAIQSFKRRN-I 315

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V +V+ G+ H   +   G ++T+G G  G LGHG+  + + P+ + SL+      V   
Sbjct: 316 HVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCAR 375

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
              T  + D            G +F +G    G LG  D    ++ + P  +  L D   
Sbjct: 376 KRKTFVLTD-----------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYV 424

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSG 544
            Q S G   TV +T  G V+  G     QLG    +   +   ++  K  EE V    SG
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEIVIAAPSG 484



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 23/240 (9%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPW 431
           +VA G +HT +V  S  +++ G    GVLGHG +    +    V      +V +++    
Sbjct: 107 QVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
           H A + ++           G++FT GD      GH +  R +  PT +  L      Q +
Sbjct: 166 HAAFVTEL-----------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVA 214

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-----VKGISSGS 545
            G   TV LT  G+VYT GS  HGQLG+    DR+      K+ E F     V  +++G+
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATP----KIVELFEGLAPVVQVAAGA 270

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            +   +T  G+VY++G   N  LG GD  +   P  +++ + R +  V   +    A+ L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+ ++S     + V  +S G +HA  +   G V+ WG G  G LGH    D + 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L       V   + +T  LT  G ++ +G    G+    +R S    +  ++ D
Sbjct: 358 PELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLD 417

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L    VS+++ G +HT  V+  G +F +GD     LG   ++   +P E+
Sbjct: 418 SLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI 468


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 129/254 (50%), Gaps = 19/254 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S GA H A VT  G V+ WG+G+ G+LGH  ++D   P+ V  + G  V+SVS G + T
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKG-EVKSVSAGFYHT 336

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD-GVRVSKVACGEWHTAIVS 385
            A+T  G ++TWG    G   +G   +    +P  +   ++ G+ V+    G  HT +++
Sbjct: 337 VAVTHHGALFTWGDGKEGK--LGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLN 394

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             GQ+F++G G  G LGHGN  +   P  + +L   +  S+A G  H+ A+ D       
Sbjct: 395 RRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD------- 447

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA---SCGRMLTVGLTGL 502
                G+++TWG    GRLGH     ++LP  +  L+  D ++A   + G   T      
Sbjct: 448 ----QGQIYTWGCGKLGRLGHGSDSDEVLPRKLA-LISHDTIKAIAVAAGEAHTCIFRSE 502

Query: 503 GKVYTMGSAVHGQL 516
           G + T+G   HG++
Sbjct: 503 GSLITLGRVSHGRM 516



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 15/257 (5%)

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
           + H + R     L  V  S ++ G  H A V+ +G ++T+G G +G LGHG+  +   P+
Sbjct: 258 KKHRVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQ 317

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            V  ++G +VKSV+ G +HT A+              G LFTWGD  +G+LGH D  ++L
Sbjct: 318 PVPRIKG-EVKSVSAGFYHTVAVTH-----------HGALFTWGDGKEGKLGHNDNAQRL 365

Query: 474 LPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
           +PT V   +++      A  G   T+ L   G+V++ GS   G+LG+    D+       
Sbjct: 366 IPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLS 425

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            L+ E    I++G  H   LT  G +YTWG    G+LG G   +   P  +  +    ++
Sbjct: 426 ALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIK 485

Query: 592 SVVCGSSITAAICLHKS 608
           ++   +   A  C+ +S
Sbjct: 486 AIAVAAG-EAHTCIFRS 501



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 29/265 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG+G  G  +G   D         VD ++P+ +   +  +V+++S G  H   VT  
Sbjct: 294 VYTWGQGRYG-QLGHGDD---------VDKIIPQPVPR-IKGEVKSVSAGFYHTVAVTHH 342

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEIYTW 338
           G +F WG+GK+G+LGH  N     P LV      G+ V +   G   T  L + G+++++
Sbjct: 343 GALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSF 402

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  + G   +G       W P      L+  R   +A G  H+  ++  GQ++T+G G  
Sbjct: 403 GSGDSGR--LGHGNDNDQWSP-TFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKL 459

Query: 399 GVLGHGNLQNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
           G LGHG+  +   P+++   S   +K  +VA G  HT       + R +     G L T 
Sbjct: 460 GRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTC------IFRSE-----GSLITL 508

Query: 457 GDADKGRLGHVDGERKLLPTCVTRL 481
           G    GR+      + +L T  T +
Sbjct: 509 GRVSHGRMAEGSCAQDMLDTLHTAI 533



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 19/268 (7%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           +  L  +   ++S G     A+T +G +YTWG   +G   +G        +P+ +   + 
Sbjct: 267 LSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQ--LGHGDDVDKIIPQPV-PRIK 323

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKS 425
           G  V  V+ G +HT  V+  G LFT+GDG  G LGH +      P  V +    G+ V +
Sbjct: 324 G-EVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAA 382

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
              G  HT     ++++R       G++F++G  D GRLGH +   +  PT ++ L    
Sbjct: 383 AQAGGSHT-----LVLNRR------GQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESER 431

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI--SS 543
            V  + G   +V LT  G++YT G    G+LG+    D  +      +  + +K I  ++
Sbjct: 432 CVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAA 491

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           G  H  +  S GS+ T G+ ++G++  G
Sbjct: 492 GEAHTCIFRSEGSLITLGRVSHGRMAEG 519


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 24/321 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H   +  +G V+ +G   + +LG     D S P  V  L+  +  +++ G + T
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT--DAIAIAGGVYHT 653

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL   G ++TWG NN G    G   +RS   P ++    D   V  +A G++HT  + +
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRS--TPVQVIGLTD---VIAIAGGDYHTIALKS 708

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++T+G   +G LG G   N S P +V+ L    + ++A G  H+ A+        KS
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLA--DIIAIAGGYVHSIAL--------KS 758

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   G ++ WG    G+LG       L P  V+ L D   +  + G + T+ L   G V+
Sbjct: 759 D---GTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDI--IAIAGGYIHTIALKSDGTVW 813

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G    GQLG+    + S  V    L +  V  +++  YH   L S G+V+TWG+N  G
Sbjct: 814 AWGHNEGGQLGDGTTTNSSTPVQVSGLTD--VIAVTARLYHTIALKSDGTVWTWGRNIYG 871

Query: 567 QLGLGDSQERETPTFVEALRD 587
           QLG G + ER  P  V  L D
Sbjct: 872 QLGDGSTTERSLPVQVIGLTD 892



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 151/321 (47%), Gaps = 24/321 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS GA H   +  +G V+ WG   +G+LG +   + S P  V  L+  +V +++ G + T
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLT--DVIAIAGGAYHT 205

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL   G ++ WG+N  G    G    RS   P ++    D   V  +A G  HT  + +
Sbjct: 206 IALKSDGTVWAWGNNEGGQLGDGSTTDRS--TPVQVSGLTD---VIAIAGGYAHTIALKS 260

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++ +GD   G LG G+  N S P +V  L    V ++A G  HT A+        KS
Sbjct: 261 DGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLS--DVIAIAGGNAHTIAL--------KS 310

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   G ++ WGD + G+LG      +  P  V+ L D   +  + G   T+ L   G V+
Sbjct: 311 D---GTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADV--IAIAGGYSHTIVLRSDGTVW 365

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           T G    GQLG+    +RS  V    L +  V  I+ G YH   + S G+++ WG N  G
Sbjct: 366 TWGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVYHTIAVKSDGTMWAWGYNWYG 423

Query: 567 QLGLGDSQERETPTFVEALRD 587
           QLG G +    TP  V  L D
Sbjct: 424 QLGDGTTINSSTPVQVNGLTD 444



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 156/340 (45%), Gaps = 26/340 (7%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           + DV  I+ GA H   +  +G V+ WG  + G+LG     D S P  V  L+  +V +++
Sbjct: 192 LTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT--DVIAIA 249

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G   T AL   G ++ WG N  G    G   +RS  +P K+    D   V  +A G  H
Sbjct: 250 GGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRS--IPVKVGGLSD---VIAIAGGNAH 304

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           T  + + G ++ +GD   G LG G+  N S P +V  L    V ++A G  HT      +
Sbjct: 305 TIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLA--DVIAIAGGYSHT------I 356

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
           V R       G ++TWG  + G+LG      +  P  V+ L   D +  + G   T+ + 
Sbjct: 357 VLRSD-----GTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLA--DVIAIAGGVYHTIAVK 409

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G ++  G   +GQLG+    + S  V    L +  V  I+ G YH   + S G+V+TW
Sbjct: 410 SDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTD--VIAIAGGYYHTIAMKSDGAVWTW 467

Query: 561 GKNANGQLGLGDSQERETPT--FVEALRDRQVESVVCGSS 598
           G N  GQLG G    R TP    +  ++     +V  GS+
Sbjct: 468 GFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSA 507



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 172/366 (46%), Gaps = 37/366 (10%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DGS + + T V        + + + D   I+ G  H   +  +G V+ WG    G+LG  
Sbjct: 625 DGSTTDSSTPV--------QVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDG 676

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             ++ S P  V+ +   +V +++ G++ T AL   G ++TWG N +G    G   +RS  
Sbjct: 677 TTINRSTP--VQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS-- 732

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P ++    D   +  +A G  H+  + + G ++ +G   +G LG G+  +   P +V  
Sbjct: 733 TPVQVKGLAD---IIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSG 789

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    + ++A G  HT A+        KS+   G ++ WG  + G+LG         P  
Sbjct: 790 LT--DIIAIAGGYIHTIAL--------KSD---GTVWAWGHNEGGQLGDGTTTNSSTPVQ 836

Query: 478 VTRLVDFDFVQASCGRML-TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
           V+ L D   V A   R+  T+ L   G V+T G  ++GQLG+    +RS+ V    L + 
Sbjct: 837 VSGLTDVIAVTA---RLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTD- 892

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  I+ G YH   L S G+V+ WG N N QLG   ++   TP  V +LR   + SV   
Sbjct: 893 -VIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTP--VRSLR-YDMNSVTTP 948

Query: 597 SSITAA 602
           + IT +
Sbjct: 949 AVITGS 954



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 148/328 (45%), Gaps = 24/328 (7%)

Query: 260  VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
            + L    IS GA H   +  +G V+  G   +G+LG    ++ S P  V  L+  +V ++
Sbjct: 1037 IFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLT--DVIAI 1094

Query: 320  SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
            + G++ T AL     ++ WG N++G    G   +RS   P           +  +A G  
Sbjct: 1095 AGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYL-----TNIIAIAGGYV 1149

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            HT  + + G ++ +G   +G LG G+  N S P +V  L    V ++A    HT A+   
Sbjct: 1150 HTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLT--DVIAIAGEYVHTVAL--- 1204

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                 KS+   G ++ WG    G+LG      +  P  V+ L D   +  + G + T+ L
Sbjct: 1205 -----KSD---GTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV--IAIAGGYVHTIAL 1254

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
               G V+T G    GQLG+    +R   V    L +     I+ G YH   L S  +V+ 
Sbjct: 1255 KSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAIA--IAGGDYHTIALKSDNTVWA 1312

Query: 560  WGKNANGQLGLGDSQERETPTFVEALRD 587
            WG N+ GQLG G +  R TP  V  L D
Sbjct: 1313 WGSNSYGQLGDGTTINRLTPVQVSGLTD 1340



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 148/320 (46%), Gaps = 26/320 (8%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
            + DV  I+ G  H   +  +  V+ WG    G+LG     + S P  V  L+  N+ +++
Sbjct: 1088 LTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLT--NIIAIA 1145

Query: 321  CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW- 379
             G   T AL   G ++ WG+N +G    G   +RS   P ++    D + ++    GE+ 
Sbjct: 1146 GGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRS--TPVQVSGLTDVIAIA----GEYV 1199

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            HT  + + G ++ +G   +G LG G+  N S P +V  L    V ++A G  HT A+   
Sbjct: 1200 HTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLT--DVIAIAGGYVHTIAL--- 1254

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                 KS+   G ++TWG  + G+LG      +L P  V+ L D   +  + G   T+ L
Sbjct: 1255 -----KSD---GTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDA--IAIAGGDYHTIAL 1304

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
                 V+  GS  +GQLG+    +R   V    L +     I+ G YH   L S  +V+ 
Sbjct: 1305 KSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTDAIA--IAGGDYHTIALKSDNTVWA 1362

Query: 560  WGKNANGQLGLGDSQERETP 579
            WG N+ GQLG   +    TP
Sbjct: 1363 WGSNSYGQLGDVSTANSLTP 1382



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 17/216 (7%)

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           S+++ G +HT  +   G ++T+G    G LG  +  N S P +V  L    V ++A G +
Sbjct: 146 SQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLT--DVIAIAGGAY 203

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           HT A+        KS+   G ++ WG+ + G+LG      +  P  V+ L   D +  + 
Sbjct: 204 HTIAL--------KSD---GTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT--DVIAIAG 250

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           G   T+ L   G V+  G    G+LG+    +RSI V  G L +  V  I+ G+ H   L
Sbjct: 251 GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSD--VIAIAGGNAHTIAL 308

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            S G+V+ WG N  GQLG G +  R TP  V  L D
Sbjct: 309 KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLAD 344



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           Q S G   T+ L   G V+T G+  +GQLG+    +RS  V    L +  V  I+ G+YH
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYH 204

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              L S G+V+ WG N  GQLG G + +R TP  V  L D  V ++  G + T A+
Sbjct: 205 TIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGGYAHTIAL 258



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 132/332 (39%), Gaps = 36/332 (10%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP--KLVECLSGINVQS 318
           + DV  I+ G  H   +  +G V+ WG    G+LG     + S P  + +  +  +   +
Sbjct: 442 LTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPT 501

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           V+ G   TC    S  +  W        + G   + + W        +       ++CG 
Sbjct: 502 VTTGS-ATCVSLSSALLNGW--------VNGNGVATTAWFDYGTSTGMYFDATKTISCGT 552

Query: 379 WHTAIVSTSGQLF---TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
             T + +T G L    TY    +  +   N+  +    E   +       ++ G +HT  
Sbjct: 553 GSTYVGATLGDLTPWTTY----YCRIASQNIGGIYYGSETTFM---PRTQISAGAYHTLT 605

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
           +        K +   G ++ +G     +LG         P  V+ L D   +  + G   
Sbjct: 606 L--------KPD---GTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDA--IAIAGGVYH 652

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           T+ L   G V+T G    GQLG+    +RS  V    L +  V  I+ G YH   L S G
Sbjct: 653 TIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTD--VIAIAGGDYHTIALKSDG 710

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           +V+TWG N  GQLG G +  R TP  V+ L D
Sbjct: 711 TVWTWGFNYYGQLGGGATTNRSTPVQVKGLAD 742


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 174/368 (47%), Gaps = 34/368 (9%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
           +E+A  L    IS G  H++LV  +G+++ WG+G  GRLG         P L   L   +
Sbjct: 85  VENASGLTEVGISCGLFHSSLVV-DGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLD--S 141

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++S + G   + AL+  G+++TWG+   GA  +G        LPR +  + +  ++  +A
Sbjct: 142 IRSTALGGVHSVALSSLGQVFTWGYGGFGA--LGHSVYHRELLPRMVEGSWN-AKIRHIA 198

Query: 376 CGEWHTAIVSTSGQLFTYG----DGTFGV---LGHGNLQNVSQPKEVESLRGLKVKSVAC 428
               HTA ++ SG+L+T+G    DG  G+    G      +S P +V++L  + V +V+C
Sbjct: 199 TAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALP-VPVAAVSC 257

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G + T  +              G+L+ WG      LG  D      P  +  L D   +Q
Sbjct: 258 GGFFTMVLTQE-----------GQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQ 306

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            + G   ++ LT  GKV + G   HGQLG+   +++ I  V   L +E V  I+ G    
Sbjct: 307 IASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSS 366

Query: 549 AVLTSGGSVYTWGKNANGQLGL-GDSQERETPTFVEALRD------RQVESVVCGSSITA 601
           A +T  G +Y WG   + QLG+ G  + +  P  V+ L +        V SV  G+S   
Sbjct: 367 AAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGAS--H 424

Query: 602 AICLHKSI 609
           A+CL  S+
Sbjct: 425 AMCLVSSL 432



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 153/327 (46%), Gaps = 25/327 (7%)

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
           C   VE  SG+    +SCG F + +L   G+++ WG  + G   +G  +    +LP  L 
Sbjct: 81  CLPSVENASGLTEVGISCGLFHS-SLVVDGKLWIWGKGDGGR--LGFGQEYPAFLP-TLN 136

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             LD +R    A G  H+  +S+ GQ+FT+G G FG LGH        P+ VE     K+
Sbjct: 137 PNLDSIR--STALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKI 194

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG-DADKGRLG------HVDGERKLLPT 476
           + +A    HTAAI +            G+L+TWG D   GRLG        +G    +P+
Sbjct: 195 RHIATAGTHTAAITE-----------SGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPS 243

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L        SCG   T+ LT  G+++  G+  + +LG               L++ 
Sbjct: 244 KVKAL-PVPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDV 302

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            +  I+SG YH   LT  G V +WG   +GQLG    + ++ PT +EAL D  V  + CG
Sbjct: 303 RIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACG 362

Query: 597 SSITAAICLHKSISVGDQSSCSQCRMP 623
            S +AAI  +  + +   +  SQ  +P
Sbjct: 363 GSSSAAITDNGKLYMWGNAKDSQLGVP 389



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 26/175 (14%)

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRL---VDFDF--------------------VQ 488
           +L +WG    G+LG    E +L P+ V  L     F+                     V 
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            SCG +    L   GK++  G    G+LG  +     +  +   L    ++  + G  H 
Sbjct: 96  ISCG-LFHSSLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDS--IRSTALGGVHS 152

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             L+S G V+TWG    G LG         P  VE   + ++  +    + TAAI
Sbjct: 153 VALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAI 207


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 149/305 (48%), Gaps = 27/305 (8%)

Query: 297 KVNMDVSC-PKLVECL----SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           +V   +SC P+ +  L    +G+ V  V  G     A T SGE++ WG N HG   VG R
Sbjct: 51  EVTRQISCSPRRLAVLERGGAGVQVHQVLAG--SGGARTPSGELFAWGQNLHGQLGVG-R 107

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
           +  S   P ++ + L GV +++++ GE H+  +S SG ++++G   FG LG G+ ++   
Sbjct: 108 KFPSTTTP-QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDS 166

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
           P  +E+L   KV+ +ACG  H+A +              G LFT+G    G+LGH   + 
Sbjct: 167 PSLIEALDNQKVEFLACGGSHSALLTQ-----------DGLLFTFGAGKHGQLGHNSTQN 215

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
           +L P  V  LV     Q +CGR  T+  ++  GKV++ GS   GQLGN    D+ I +  
Sbjct: 216 ELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 275

Query: 531 GKLKEEFVKGISSGSYHVAVLTSGG--SVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
                E +K  S  S    ++ +GG  S+  W K  N  + L    +R  PT  E    R
Sbjct: 276 KVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSYVNL----KRTIPTLNEGTVKR 331

Query: 589 QVESV 593
            +  V
Sbjct: 332 WIADV 336



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 107/202 (52%), Gaps = 14/202 (6%)

Query: 278 TKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           T  GE+F WG+   G+LG        + P++VE L+G+ +  +S GE  + AL+ SG IY
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           +WG N  G   +G   S+       L + LD  +V  +ACG  H+A+++  G LFT+G G
Sbjct: 147 SWGKNEFGQLGLGHTESKDS---PSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAG 203

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             G LGH + QN  +P  V  L G +V  +ACG WHT A V             GK+F++
Sbjct: 204 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF----------GKVFSF 253

Query: 457 GDADKGRLGHVDGERKLLPTCV 478
           G    G+LG+     +L+P  V
Sbjct: 254 GSGKDGQLGNGGTLDQLIPLPV 275



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+++E    + +  IS G  H+  ++  G ++ WG+ + G+LG         P L+E L 
Sbjct: 115 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALD 174

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V+ ++CG   +  LT+ G ++T+G   HG   +G   +++   P  L   L G RV+
Sbjct: 175 NQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ--LGHNSTQNELRP-CLVAELVGNRVT 231

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNL--QNVSQPKEVESLRGLKVKSVACG 429
           ++ACG WHT A VS  G++F++G G  G LG+G    Q +  P +V S   LK++S    
Sbjct: 232 QIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLES---- 287

Query: 430 PWHTAAIVDIMV 441
             HT+    IM+
Sbjct: 288 --HTSEKELIMI 297



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 3/103 (2%)

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           G+++  G  +HGQLG  +    + T  +VE  L    +  IS+G  H   L+  G++Y+W
Sbjct: 90  GELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPLAQISAGEAHSMALSMSGNIYSW 148

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GKN  GQLGLG ++ +++P+ +EAL +++VE + CG S +A +
Sbjct: 149 GKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 191



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 11/158 (6%)

Query: 451 GKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           G+LF WG    G+LG     RK      P  V  L      Q S G   ++ L+  G +Y
Sbjct: 90  GELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 507 TMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           + G    GQLG  + ++KD S +++E  L  + V+ ++ G  H A+LT  G ++T+G   
Sbjct: 147 SWGKNEFGQLGLGHTESKD-SPSLIEA-LDNQKVEFLACGGSHSALLTQDGLLFTFGAGK 204

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 205 HGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 242


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 168/367 (45%), Gaps = 29/367 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTK 279
           V+ WG G          DG +     + D   P+ + S +     ++  GA+++ A+   
Sbjct: 31  VLSWGRGE---------DGQLGHGDAE-DRQEPQAVFSLLHRGATSVHCGAEYSMAVAGG 80

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           + +V+ WG G  GRLG     DV  P  +  L+G  V SV+CG+  T   T  G+++ +G
Sbjct: 81  DKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFG 140

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N +G   +G   S    L  +L   L G  V  VACG  H+  V++ G+++ +G G +G
Sbjct: 141 RNQNGQCGLG---SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYG 197

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            +G G  Q+   P   + L G+KV  V CG  H+     I VD       GG ++TWG  
Sbjct: 198 NIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHS-----IAVDE------GGAMYTWGWG 246

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
              +L   D +   +P  V  +     V  + G   T+     G+++  G    GQ G  
Sbjct: 247 AYAQLMQGDRKDHYVPKRVEAVQQVATV--AGGWRHTMAADSQGRLFASGWNKFGQCGVG 304

Query: 520 KAKD-RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             +D   +  VE    E  V+ + SG  H   +T  G  ++WG+N NGQLG    Q+  +
Sbjct: 305 HNEDVVRVQQVEALAGERVVQ-VKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNS 363

Query: 579 PTFVEAL 585
           P  + AL
Sbjct: 364 PVELAAL 370



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 160/345 (46%), Gaps = 20/345 (5%)

Query: 263 DVQNISLGAKH--AALVTKEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
           +V  ++ G+ H  A + T  G  V  WG G+DG+LGH    D   P+ V  L      SV
Sbjct: 8   EVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSV 67

Query: 320 SCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
            CG E+         ++Y+WG  + G   +G    +  ++P  L   L G RV+ VACG+
Sbjct: 68  HCGAEYSMAVAGGDKQVYSWGWGDFG--RLGTGDVKDVFIPCPL-PALAGRRVASVACGD 124

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            HT + +  GQLF +G    G  G G++Q+  +P+ V +L+G +V +VACG  H+  +  
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTS 184

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                       G+++ WG    G +G  + + + LPT    L      Q +CG   ++ 
Sbjct: 185 E-----------GEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIA 233

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           +   G +YT G   + QL     KD  +      +++  V  ++ G  H     S G ++
Sbjct: 234 VDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQ--VATVAGGWRHTMAADSQGRLF 291

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G N  GQ G+G +++      VEAL   +V  V  G   T A+
Sbjct: 292 ASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAV 336



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 144/310 (46%), Gaps = 26/310 (8%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           K V  WG G    D G    G V       D  +P  L +     V +++ G  H  + T
Sbjct: 82  KQVYSWGWG----DFGRLGTGDVK------DVFIPCPLPALAGRRVASVACGDTHTLVAT 131

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
            EG++F +G  ++G+ G     D   P+LV  L G  V +V+CG   +  +T  GE+Y W
Sbjct: 132 AEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCW 191

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G   +G   +G+  S+   LP  L   L+GV+V++V CG  H+  V   G ++T+G G +
Sbjct: 192 GWGRYGN--IGDGESQDRHLP-TLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAY 248

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             L  G+ ++   PK VE+++  +V +VA G  HT A               G+LF  G 
Sbjct: 249 AQLMQGDRKDHYVPKRVEAVQ--QVATVAGGWRHTMAADSQ-----------GRLFASGW 295

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+ G    E  +    V  L     VQ   G   T+ +T  GK ++ G  V+GQLG+
Sbjct: 296 NKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGH 355

Query: 519 PKAKDRSITV 528
              +D +  V
Sbjct: 356 SGMQDSNSPV 365


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 156/372 (41%), Gaps = 30/372 (8%)

Query: 215 KDILKDVMIWGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA 271
           +D    V+ WG+   G LG       DG+ + + T +   LP          +  I+ G 
Sbjct: 68  RDASDTVLAWGDNKDGELG-------DGTTTDSSTPIAVDLPAGTT------ITAIAAGH 114

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
            H+  VT  G    WG    G+LG     D S P  V+  +G  V +++ G+  + A+T 
Sbjct: 115 DHSLAVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTS 174

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           +G    WG N+ G   +G+  +     P  + D   G  V+ +A G  H+  ++++G + 
Sbjct: 175 AGTALAWGDNDRGE--LGDGTTTRRDTPVDV-DLPAGTTVTAIAAGIGHSLALTSAGTVL 231

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           T+G  + G LG G   + S P  V+   G  V ++A G  H+ A+              G
Sbjct: 232 TWGLNSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVT-----------TAG 280

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            +  WG+   G+LG         P  V             GR  ++ +T  G     G  
Sbjct: 281 TILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDN 340

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
             GQLG+    + S  +      +  V   ++GS H   +T+ G++  WG N++G+LG G
Sbjct: 341 DDGQLGDGTTTNSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDG 400

Query: 572 DSQERETPTFVE 583
            +    TP  V 
Sbjct: 401 TTTNSSTPIAVN 412



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 25/280 (8%)

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
            S  +  WG N  G   +G+  +     P  + D   G  ++ +A G  H+  V+++G  
Sbjct: 70  ASDTVLAWGDNKDGE--LGDGTTTDSSTPIAV-DLPAGTTITAIAAGHDHSLAVTSAGTA 126

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
             +G+  FG LG G+  + S P  V+   G  V ++A G  H+ A+              
Sbjct: 127 LAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTS-----------A 175

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G    WGD D+G LG     R+  P  V           + G   ++ LT  G V T G 
Sbjct: 176 GTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGL 235

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
              GQLG+    D S  +         V  I++GS H   +T+ G++  WG N++GQLG 
Sbjct: 236 NSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGD 295

Query: 571 GDSQERETP-----------TFVEALRDRQVESVVCGSSI 599
           G +    TP           T ++  RD  +     GS++
Sbjct: 296 GTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSAL 335



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 134/330 (40%), Gaps = 24/330 (7%)

Query: 222 MIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG 281
           + WG  + G  +G   DGS + + T +   LP          V  I+ G  H+  VT  G
Sbjct: 127 LAWGNNLFG-QLG---DGSTTDSSTPIAVDLPAGTT------VTAIAAGDDHSLAVTSAG 176

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
               WG+   G LG         P  V+  +G  V +++ G   + ALT +G + TWG N
Sbjct: 177 TALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLN 236

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           + G   +G+  +     P  + D   G  V+ +A G  H+  V+T+G +  +G+ + G L
Sbjct: 237 SDGQ--LGDGTTTDSSTPIAV-DLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQL 293

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           G G   N S P  V       + ++  G  H+ A+              G    WGD D 
Sbjct: 294 GDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTS-----------AGSALAWGDNDD 342

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG         P  V    D      + G + ++ +T  G +   G+   G+LG+   
Sbjct: 343 GQLGDGTTTNSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTT 402

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            + S  +      +  V   ++GS H   L
Sbjct: 403 TNSSTPIAVNLPADTTVTATTAGSAHSMAL 432


>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
          Length = 1207

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 171/402 (42%), Gaps = 82/402 (20%)

Query: 271 AKHAALVTKEG----------EVFCWGEGKDGRLGHKVNMDVSCPKLVE-----CLSGIN 315
           A H AL T             EVF WG  K G+LG  +   +S  K        C   I 
Sbjct: 43  ANHDALNTSSNKSQVQGGDYTEVFSWGSDKFGQLG--LGKQISSQKQFHMVPRFCSYNIP 100

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           +  VSCG   +  +T S  IY+ G N  G   + +  ++    P  L + L   +  +++
Sbjct: 101 ITQVSCGTSHSVFITSSQLIYSMGSNLQGQLGIDDPYTQQKSSP-VLVELLVNHKPIQIS 159

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQ--PKEV--ESLRGLKVKSVACG 429
           CG  HT  +   G+++++G    G  G G      V Q  PK V  +  +   +K +  G
Sbjct: 160 CGNNHTLALMRDGEVYSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSG 219

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
            +H+  + +I           G+LF  G  D+G+LG++  + +L P  ++++ +    + 
Sbjct: 220 AFHSGFVDEI-----------GRLFMCGKGDQGQLGNMSYQDELSPFYISKIPE-KIQEV 267

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR--SITVVEGKLKEEFVKGISSGSY- 546
           +CG   TV LT  G++YTMGS   GQLG   +  R  ++ V+  +L    +  I +G + 
Sbjct: 268 ACGDDHTVVLTRNGEIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQFS 327

Query: 547 -------------------------------------------HVAVLTSGGSVYTWGKN 563
                                                       + VLT  GSVYTWG N
Sbjct: 328 ASLSVDNQLYLWGCGTFGEFFTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWGIN 387

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
             GQLGL DS +R TP  VEAL  ++V  + CG     A+ L
Sbjct: 388 DMGQLGLRDSIQRSTPHRVEALDGKRVTQITCGRDYVIALGL 429


>gi|401413326|ref|XP_003886110.1| putative regulator of chromosome condensation domain-containing
           protein [Neospora caninum Liverpool]
 gi|325120530|emb|CBZ56084.1| putative regulator of chromosome condensation domain-containing
           protein [Neospora caninum Liverpool]
          Length = 717

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 192/490 (39%), Gaps = 151/490 (30%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNIS---LGAKHAALVTKEGEVFCWGEGK 290
           G  +DG +    + +    P+ + ++ + D + IS    GA H+   T  G VF WG G 
Sbjct: 184 GSGIDGQLGLGGSILSVSTPQRVPASALHDGECISQCAAGAFHSVCCTSLGRVFTWGRGG 243

Query: 291 DGRLGHKVNMDV---------------------------SCPKLVECLSGIN--VQSVSC 321
             RLGH    D                            + PK VE L  ++  V +V+C
Sbjct: 244 KNRLGHDWPRDAPSSAVSSGDKPLRSSTLSSGVAETAVQTLPKCVEGLWRVSARVVAVAC 303

Query: 322 GEFQTCALTKSGEIYTWGHNNHG------------ADLVGER----RSRSHWL------- 358
           GE  T ALT+SGE+Y+WG N HG            A+  GER    + R  WL       
Sbjct: 304 GEDHTLALTESGEVYSWGGNAHGECGRAETSDNAEAEGGGERQPARKPRRSWLWGVIRGD 363

Query: 359 ---------------------------------PRKLFDTLDGVRVSKVACGEWHTAIVS 385
                                              ++   L G RV+++ACG+  +A V+
Sbjct: 364 KGEGDVDTSERDSSASDADSPWAGRTEKERGLVGGRVDGALRGKRVTQIACGKHVSAAVT 423

Query: 386 TSGQLFTYGDGTFGVLG----------------------HGNLQNVSQPKEVESLRGL-- 421
             G L+ +G+G  G +G                       G   NV  P+++E + GL  
Sbjct: 424 EEGDLYVWGEGRGGQVGPPPSPSRRSQDRKKSDCISTSSSGLSFNVRTPRKLE-VYGLAE 482

Query: 422 -----------KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
                      KV  VACG  H AA+ +            G+++TWG  D G+LG     
Sbjct: 483 GEEAFRERTPKKVVQVACGSSHCAALTE-----------NGEVYTWGSDDYGQLGLGKES 531

Query: 471 RKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
           R +L P  V  L D   V   CG   T   T  G+V+  G    G+ GN ++ D ++ V+
Sbjct: 532 RFVLSPRRVDTLADKKVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRS-DAALPVL 590

Query: 530 EGKLKEEF---------VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE----- 575
              L+ +          V    +G  H+A  T  G ++ WG+   GQLG GD+ E     
Sbjct: 591 ISTLEPQPGGRKRGRGKVVDTVAGGGHLAAWTEEGGLWMWGRGREGQLGRGDAIESVAAS 650

Query: 576 RETPTFVEAL 585
           R+ P  VE L
Sbjct: 651 RDVPQLVEEL 660



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 165/385 (42%), Gaps = 73/385 (18%)

Query: 283 VFCWGEGKDGRLGHKVN-MDVSCPKLVECLS---GINVQSVSCGEFQTCALTKSGEIYTW 338
           ++ WG G DG+LG   + + VS P+ V   +   G  +   + G F +   T  G ++TW
Sbjct: 180 LYSWGSGIDGQLGLGGSILSVSTPQRVPASALHDGECISQCAAGAFHSVCCTSLGRVFTW 239

Query: 339 GH---NNHGADL----------VGERRSRSHWLPRKLFDT--------LDGV-----RVS 372
           G    N  G D            G++  RS  L   + +T        ++G+     RV 
Sbjct: 240 GRGGKNRLGHDWPRDAPSSAVSSGDKPLRSSTLSSGVAETAVQTLPKCVEGLWRVSARVV 299

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            VACGE HT  ++ SG+++++G    G  G     + ++ +      G   +  A  P  
Sbjct: 300 AVACGEDHTLALTESGEVYSWGGNAHGECGRAETSDNAEAE------GGGERQPARKPRR 353

Query: 433 TAAIVDIMVDRCKSNA-IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QAS 490
           +     I  D+ + +     +  +  DAD    G  + ER L+   V   +    V Q +
Sbjct: 354 SWLWGVIRGDKGEGDVDTSERDSSASDADSPWAGRTEKERGLVGGRVDGALRGKRVTQIA 413

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNP-----KAKDRSIT------------------ 527
           CG+ ++  +T  G +Y  G    GQ+G P     +++DR  +                  
Sbjct: 414 CGKHVSAAVTEEGDLYVWGEGRGGQVGPPPSPSRRSQDRKKSDCISTSSSGLSFNVRTPR 473

Query: 528 ------VVEGK--LKEEFVKG---ISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQE 575
                 + EG+   +E   K    ++ GS H A LT  G VYTWG +  GQLGLG +S+ 
Sbjct: 474 KLEVYGLAEGEEAFRERTPKKVVQVACGSSHCAALTENGEVYTWGSDDYGQLGLGKESRF 533

Query: 576 RETPTFVEALRDRQVESVVCGSSIT 600
             +P  V+ L D++V SV CG   T
Sbjct: 534 VLSPRRVDTLADKKVVSVRCGHFFT 558



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 43/236 (18%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSV-SQNKTQVDAL------------LPKLLESAVMLD--- 263
           D+ +WGEG  GG +G     S  SQ++ + D +             P+ LE   + +   
Sbjct: 427 DLYVWGEG-RGGQVGPPPSPSRRSQDRKKSDCISTSSSGLSFNVRTPRKLEVYGLAEGEE 485

Query: 264 ---------VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSG 313
                    V  ++ G+ H A +T+ GEV+ WG    G+LG  K +  V  P+ V+ L+ 
Sbjct: 486 AFRERTPKKVVQVACGSSHCAALTENGEVYTWGSDDYGQLGLGKESRFVLSPRRVDTLAD 545

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD------ 367
             V SV CG F TC  T +GE++ WG+   G    G  RS +  LP  L  TL+      
Sbjct: 546 KKVVSVRCGHFFTCCTTSTGEVFVWGYGRDGE--CGNGRSDAA-LP-VLISTLEPQPGGR 601

Query: 368 ----GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESL 418
               G  V  VA G  H A  +  G L+ +G G  G LG G+ +++V+  ++V  L
Sbjct: 602 KRGRGKVVDTVAGGG-HLAAWTEEGGLWMWGRGREGQLGRGDAIESVAASRDVPQL 656



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 115/305 (37%), Gaps = 71/305 (23%)

Query: 390 LFTYGDGTFGVLG-HGNLQNVSQPKEVESLR---GLKVKSVACGPWHTAAIVDIMVDRCK 445
           L+++G G  G LG  G++ +VS P+ V +     G  +   A G +H+     +      
Sbjct: 180 LYSWGSGIDGQLGLGGSILSVSTPQRVPASALHDGECISQCAAGAFHSVCCTSL------ 233

Query: 446 SNAIGGKLFTWGDADKGRLGH-----------VDGERKL----------------LPTCV 478
                G++FTWG   K RLGH             G++ L                LP CV
Sbjct: 234 -----GRVFTWGRGGKNRLGHDWPRDAPSSAVSSGDKPLRSSTLSSGVAETAVQTLPKCV 288

Query: 479 TRL--VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG----- 531
             L  V    V  +CG   T+ LT  G+VY+ G   HG+ G  +  D +     G     
Sbjct: 289 EGLWRVSARVVAVACGEDHTLALTESGEVYSWGGNAHGECGRAETSDNAEAEGGGERQPA 348

Query: 532 -KLKEEFVKGISSGSYHVAVL-------TSGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
            K +  ++ G+  G      +       ++  +   W      + GL   +         
Sbjct: 349 RKPRRSWLWGVIRGDKGEGDVDTSERDSSASDADSPWAGRTEKERGLVGGR------VDG 402

Query: 584 ALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFR-----RKKHNCYNC-- 636
           ALR ++V  + CG  ++AA+     + V  +    Q   P         RKK +C +   
Sbjct: 403 ALRGKRVTQIACGKHVSAAVTEEGDLYVWGEGRGGQVGPPPSPSRRSQDRKKSDCISTSS 462

Query: 637 -GLHF 640
            GL F
Sbjct: 463 SGLSF 467


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 14/204 (6%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
            + + GE+F WG+   G+LG        + P++VE L+G+ +  +S GE  + AL+ SG 
Sbjct: 77  FIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN 136

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           IY+WG N  G   +G   S+       L + LD  +V  +ACG  H+A+++  G LFT+G
Sbjct: 137 IYSWGKNEFGQLGLGHTESKD---SPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFG 193

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            G  G LGH + QN  +P  V  L G +V  +ACG WHT A V             GK+F
Sbjct: 194 AGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF----------GKVF 243

Query: 455 TWGDADKGRLGHVDGERKLLPTCV 478
           ++G    G+LG+     +L+P  V
Sbjct: 244 SFGSGKDGQLGNGGTLDQLIPLPV 267



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 20/268 (7%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           + + GE++ WG N HG   VG R+  S   P ++ + L GV +++++ GE H+  +S SG
Sbjct: 78  IVRGGELFAWGQNLHGQLGVG-RKFPSTTTP-QIVEHLAGVPLAQISAGEAHSMALSMSG 135

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
            ++++G   FG LG G+ ++   P  +E+L   KV+ +ACG  H+A +            
Sbjct: 136 NIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ---------- 185

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LTGLGKVYT 507
             G LFT+G    G+LGH   + +L P  V  LV     Q +CGR  T+  ++  GKV++
Sbjct: 186 -DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFS 244

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG--SVYTWGKNAN 565
            GS   GQLGN    D+ I +       E +K  S  S    ++ +GG  S+  W K  N
Sbjct: 245 FGSGKDGQLGNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKEN 304

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESV 593
             + L    +R  PT  E    R +  V
Sbjct: 305 SYVNL----KRTIPTLNEGTVKRWIADV 328



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 15/220 (6%)

Query: 228 VLGGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVF 284
           V GG++   G  + G +   +       P+++E    + +  IS G  H+  ++  G ++
Sbjct: 79  VRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 138

Query: 285 CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG 344
            WG+ + G+LG         P L+E L    V+ ++CG   +  LT+ G ++T+G   HG
Sbjct: 139 SWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 198

Query: 345 ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGH 403
              +G   +++   P  L   L G RV+++ACG WHT A VS  G++F++G G  G LG+
Sbjct: 199 Q--LGHNSTQNELRP-CLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGN 255

Query: 404 GNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
           G    Q +  P +V S   LK++S      HT+    IM+
Sbjct: 256 GGTLDQLIPLPVKVSSSEELKLES------HTSEKELIMI 289



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 7/118 (5%)

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGS 545
           Q +  R +  G    G+++  G  +HGQLG  +    + T  +VE  L    +  IS+G 
Sbjct: 71  QGNLSRFIVRG----GELFAWGQNLHGQLGVGRKFPSTTTPQIVE-HLAGVPLAQISAGE 125

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            H   L+  G++Y+WGKN  GQLGLG ++ +++P+ +EAL +++VE + CG S +A +
Sbjct: 126 AHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 183



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 11/159 (6%)

Query: 450 GGKLFTWGDADKGRLGHVDGERKL----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           GG+LF WG    G+LG     RK      P  V  L      Q S G   ++ L+  G +
Sbjct: 81  GGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 137

Query: 506 YTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           Y+ G    GQLG  + ++KD S +++E  L  + V+ ++ G  H A+LT  G ++T+G  
Sbjct: 138 YSWGKNEFGQLGLGHTESKD-SPSLIEA-LDNQKVEFLACGGSHSALLTQDGLLFTFGAG 195

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            +GQLG   +Q    P  V  L   +V  + CG   T A
Sbjct: 196 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 234


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 19/263 (7%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVEC 310
           +P   E+   L+V  ++ G+K    VT EG+V+  GE  +GRLG  ++   V  P+ +  
Sbjct: 449 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 508

Query: 311 LSGINVQSVSC--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
           LS   V+ V+   G     ALT  G++++WG  + G   +G   SR +    +L + L  
Sbjct: 509 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK--LGHF-SRMNCDKPRLIEALKT 565

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
            R+  +ACG  H+A +++SG+L+T+G G +G LGHG+     +PK V+ L G +V  VAC
Sbjct: 566 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 625

Query: 429 GP--WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           G     T A+ D            G +F+WGD D G+LG    E   +P  + RL     
Sbjct: 626 GSRDAQTLALTD-----------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 674

Query: 487 VQASCGRMLTVGLTGLGKVYTMG 509
            Q  CG   ++ LT  G V+T G
Sbjct: 675 CQIECGAQFSLALTKSGVVWTWG 697



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 21/235 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKD 291
           G A +G +    +     +P+ + +     V+ +++  G +HA  +T +G+VF WGEG D
Sbjct: 484 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 543

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           G+LGH   M+   P+L+E L    ++ ++CG   + ALT SGE+YTWG   +G    G+ 
Sbjct: 544 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 603

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACG--EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
            ++   L  K+   L G RV +VACG  +  T  ++  G +F++GDG FG LG G  +  
Sbjct: 604 TTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGC 660

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           + P+ +E L G  V  + CG   + A+              G ++TWG   KGRL
Sbjct: 661 NIPQNIERLNGQGVCQIECGAQFSLALTK-----------SGVVWTWG---KGRL 701



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 17/285 (5%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           +VF WG     +LG      +  P   E LS +NV  V+ G     A+T  G++Y  G  
Sbjct: 427 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 486

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFG 399
            +G   +G   S +  +PR++   L    V KVA   G  H   ++  G++F++G+G  G
Sbjct: 487 TNGRLGLG-ISSGTVPIPRQI-TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 544

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGH +  N  +P+ +E+L+  +++ +ACG  H+AA+              G+L+TWG  
Sbjct: 545 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-----------SGELYTWGLG 593

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR--MLTVGLTGLGKVYTMGSAVHGQLG 517
           + GRLGH D   +L P  V  L+    +Q +CG     T+ LT  G V++ G    G+LG
Sbjct: 594 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 653

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
              ++  +I     +L  + V  I  G+     LT  G V+TWGK
Sbjct: 654 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 698



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 23/283 (8%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           A T   +++ WG N+   D +G  +     +P    +TL  + V +VA G      V+  
Sbjct: 421 AATIRTKVFVWGLNDK--DQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 477

Query: 388 GQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVDRC 444
           G+++  G+ T G LG G +   V  P+++ +L    VK VA   G  H  A+        
Sbjct: 478 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-------- 529

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               + GK+F+WG+ D G+LGH        P  +  L        +CG   +  LT  G+
Sbjct: 530 ---TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 586

Query: 505 VYTMGSAVHGQLGN----PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +YT G   +G+LG+     + K + + V+ G    +   G  S       LT  G V++W
Sbjct: 587 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG--SRDAQTLALTDEGLVFSW 644

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G    G+LG G S+    P  +E L  + V  + CG+  + A+
Sbjct: 645 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 687



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 27/277 (9%)

Query: 343 HGADLVGERRSRSHWLPRKLFDTLD-----------GVRVSKVACGEWHTAIVSTSGQLF 391
           HG  L+G  R+    L    F   D           G  + K A G    A + T  ++F
Sbjct: 372 HGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLESAATIRT--KVF 429

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            +G      LG      +  P   E+L  L V  VA G     A+            + G
Sbjct: 430 VWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAV-----------TVEG 478

Query: 452 KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVYTM 508
           K++  G+A  GRLG  +      +P  +T L  +    V    G      LT  GKV++ 
Sbjct: 479 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 538

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    G+LG+    +     +   LK + ++ I+ GS H A LTS G +YTWG    G+L
Sbjct: 539 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 598

Query: 569 GLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
           G GD+  +  P  V+ L   +V  V CGS     + L
Sbjct: 599 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 635


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 161/363 (44%), Gaps = 35/363 (9%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG----------HKVNM 300
           L+PKL  S      Q I  G     ++  +G V   G+G  GRLG           ++N 
Sbjct: 386 LVPKLATS--FGSAQQIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNF 443

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           D       ECL      S    +  T ALT  G++Y+WG  ++G   +G   S++  +P+
Sbjct: 444 DN------ECLVKSVSSSKG-SDGHTLALTLDGKVYSWGDGDYGK--LGHGNSQTQKIPK 494

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
            +   L    V  +A G  H+A V+  G+L+T+G+G +G LGHG+  + + P +V+ +  
Sbjct: 495 LVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVA- 553

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
             V  VACG  HT  +          +  G  ++++G  D G+LGH D  R   P  +  
Sbjct: 554 -NVGQVACGSAHTVCV----------SQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEA 602

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           L      +  CG   ++ LT  G+VY  G       G+  A   +  ++   L+   V  
Sbjct: 603 LQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLA-LQSHSVVD 661

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVEALRDRQVESVVCGSSI 599
           IS G  H   LT   +VY WG N+ GQ G G      T P  V  L    V  +  G+S 
Sbjct: 662 ISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSH 721

Query: 600 TAA 602
           T A
Sbjct: 722 TVA 724



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 6/183 (3%)

Query: 263 DVQNISLGAKHAALVTKEGE-VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           +V  ++ G+ H   V+++G+ V+ +G G +G+LGH     V  PK++E L G+ ++ V C
Sbjct: 554 NVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCC 613

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   + ALT +G++Y WG    G  L       +   P KL   L    V  ++ G+ H 
Sbjct: 614 GSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATP-KLLLALQSHSVVDISVGDSHC 669

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
             ++    ++ +G+ + G  G G+    +++PK+V  L G+ V  ++ G  HT A   + 
Sbjct: 670 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWTALP 729

Query: 441 VDR 443
           +DR
Sbjct: 730 MDR 732



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 47/316 (14%)

Query: 306 KLVECLSGINVQSVSCGE--FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
           KL +  +   V+S   GE  F   +   + E+Y WG N+            SH L     
Sbjct: 335 KLADQYAKCTVKSGITGEVSFHGNSFASNEEVYVWGSNS------------SHQLAE--- 379

Query: 364 DTLDGVRVSKVA----------CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
            ++D + V K+A           G++ T ++   G +   G G++G LG G+  N +Q K
Sbjct: 380 GSMDKILVPKLATSFGSAQQIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLK 439

Query: 414 EV----ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            +    E L      S      HT A+            + GK+++WGD D G+LGH + 
Sbjct: 440 RLNFDNECLVKSVSSSKGSDG-HTLAL-----------TLDGKVYSWGDGDYGKLGHGNS 487

Query: 470 ERKLLPTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV 528
           + + +P  V   +    V   + G   +  +T  G++YT G   +G+LG+     R++ V
Sbjct: 488 QTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPV 547

Query: 529 VEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
               +    V  ++ GS H V V   G +V+++G   NG+LG  D+     P  +EAL+ 
Sbjct: 548 QVKDVAN--VGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQG 605

Query: 588 RQVESVVCGSSITAAI 603
             +  V CGS  + A+
Sbjct: 606 MVIRKVCCGSQCSLAL 621


>gi|196007790|ref|XP_002113761.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
 gi|190584165|gb|EDV24235.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
          Length = 507

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 186/430 (43%), Gaps = 57/430 (13%)

Query: 186 ELNYADTRCPKNESHRLV--TPTYGSPLIERKD-----ILKDVMIWGE---GVLGGDIGG 235
           E+N  +     NE ++++  +P     ++E  +     ++ DV  WG    G LG  +  
Sbjct: 104 EINEENQVTEINEKNQVIAASPPNNGIILEDTESDFAHVMVDVFAWGNNHSGELGIPLSK 163

Query: 236 AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
            ++         +  L P +++            G     ++++EG+V+  G+ +     
Sbjct: 164 NIEYPAPARCKAISKLRPIMIKG-----------GHDKTYILSQEGKVYGIGQVELKEDE 212

Query: 296 HKVNMDVSCPKLVECLSGINVQSVSC---GEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           H  + ++  P+L+  LS + +  +     G F    +T  GE+Y+WG             
Sbjct: 213 HD-SKNLHVPRLINGLSHLTIIKLDIHPDGHF-ALGITIKGELYSWGET----------- 259

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                 P +   ++     + ++CG  H A ++  G+L+T+G G  G LGHGN +   +P
Sbjct: 260 ------PAQQITSVKDAIFTNISCGRDHRAAITNQGKLYTWGYGGLGCLGHGNSKTCLEP 313

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
             VE+L    V  VACG  +    V +  D         K+++WGD   G+LG +    K
Sbjct: 314 TLVEALADKVVIDVACGSANQNHTVAVTSDD--------KVWSWGDPAGGKLGRIINSTK 365

Query: 473 --LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM--GSAVHGQLGNPKAKDRSITV 528
              LP  +  L++    +  CG   T+ LT  G +Y+   GS  H Q G   + +R   V
Sbjct: 366 PCTLPGVIDGLLNKSVHRVICGSAFTLALTTSGSLYSWGHGSHYHSQHGIVGSVERPKIV 425

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
               LK++ V  I++GS H    T  G +Y WG N  GQLG+   +       V+ L D 
Sbjct: 426 --DVLKDKRVIAIAAGSLHWLACTIYGEIYAWGNNDAGQLGVKTLKSSTDVIQVDTLMDE 483

Query: 589 QVESVVCGSS 598
            +  V CG S
Sbjct: 484 DINQVSCGFS 493



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 3/129 (2%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP +++  +   V  +  G+     +T  G ++ WG G      H +   V  PK+V+ L
Sbjct: 369 LPGVIDGLLNKSVHRVICGSAFTLALTTSGSLYSWGHGSHYHSQHGIVGSVERPKIVDVL 428

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
               V +++ G     A T  GEIY WG+N+ G   V   +S +  +     DTL    +
Sbjct: 429 KDKRVIAIAAGSLHWLACTIYGEIYAWGNNDAGQLGVKTLKSSTDVIQ---VDTLMDEDI 485

Query: 372 SKVACGEWH 380
           ++V+CG  H
Sbjct: 486 NQVSCGFSH 494


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSSGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL +
Sbjct: 315 ------GPSDTSK---PTHSEALTE 330



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 154/318 (48%), Gaps = 37/318 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDAHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HGQLGNPKAK---------DRSITVVEGKLK 534
            Q  CG   T     L  V+T G  V   HG     K           D S  +    L 
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLISAEDLV 344

Query: 535 EEFVKGISSGSYHVAVLT 552
           +  VK I +G+Y   V T
Sbjct: 345 DVHVKHIFAGTYANFVTT 362



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 150/326 (46%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--TDSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L G+K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 32/323 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  +NV  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G  + + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L   GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVISFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEAL 585
             +         ++  PT  EAL
Sbjct: 315 GPS---------DKSKPTHPEAL 328



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 139/270 (51%), Gaps = 26/270 (9%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L+V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVL---GHGNLQNVSQPKEVESLRGLKVKSVA 427
           +++VA G  H+  +S  G  F +G  + G L   G       ++P  + +L+ L V  ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYIS 242

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HTA ++             GK+FT+GD   G+LG+     K  P  V R +D    
Sbjct: 243 CGDEHTAVLIQ-----------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGLVS 290

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAV---HG 514
           Q  CG   T     L  V+T G  +   HG
Sbjct: 291 QIDCGSYHT-----LAYVHTTGQVISFGHG 315



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 29/261 (11%)

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  + + A GE H+ ++ T+ ++ + GD + G LG         P+ +++L  L V  V+
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDF 484
           CG  H+ A+       C      G++F WG   +G+LG   GE K     P  +T L   
Sbjct: 82  CGKEHSLAV-------CHK----GRVFAWGAGSEGQLG--IGEFKEISFTPKKITTLNGI 128

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVK 539
             +Q SCG   ++ L+   +V++ G   HGQLG  K     A  + +  +EG      + 
Sbjct: 129 KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIP----LA 184

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCG 596
            +++G  H   L+  G+ + WG N+ GQL L       +   P  + AL++  V  + CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244

Query: 597 SSITAAICLH-KSISVGDQSS 616
              TA +    K  + GD SS
Sbjct: 245 DEHTAVLIQDGKVFTFGDNSS 265



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA++   G++FT+GD + G LG+        P
Sbjct: 220 VPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSSGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL +
Sbjct: 315 ------GPSDTSK---PTHSEALTE 330



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 154/318 (48%), Gaps = 37/318 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDAHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HGQLGNPKAK---------DRSITVVEGKLK 534
            Q  CG   T     L  V+T G  V   HG     K           D S  +    L 
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLISAEDLV 344

Query: 535 EEFVKGISSGSYHVAVLT 552
           +  VK I +G+Y   V T
Sbjct: 345 DVHVKHIFAGTYANFVTT 362



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 150/326 (46%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--TDSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L G+K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 163/346 (47%), Gaps = 28/346 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV---NMDVSCPKLVECLSGINVQSVS 320
           +++++ G +  A+V  +G VF  G  K G+ G+      + ++ P  V  LSGI +  V+
Sbjct: 499 IRDVAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATP--VRALSGIAISMVA 556

Query: 321 C--GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
              G     A+   G +++WG+N+ G   +G   S+SH  PR +    +   ++  A   
Sbjct: 557 AANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSH-TPRMIDSLREKYHITTAAVSY 615

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            H+A+VS++G+L T+G    G LG  + Q+   P+ V++L    V   ACG +HT A   
Sbjct: 616 HHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATS 675

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFD--FVQASCGRML 495
                       G+++++G  D G+LG         P  V T L + D   V  SCG   
Sbjct: 676 -----------DGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYH 724

Query: 496 TVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           TV ++  GK+ T G   +GQLG   K    S   V   +  + +K  S G YH  +L S 
Sbjct: 725 TVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSK-IKNASCGCYHSLILMSN 783

Query: 555 GSVYTWGKNANGQLGLG----DSQERETPTFVEALRDRQVESVVCG 596
           G V  +G+N  GQLG G     S +   P    +L + +V  +  G
Sbjct: 784 GRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAG 829



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 142/304 (46%), Gaps = 23/304 (7%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECL-SGIN 315
           S + + +   + G +H   V  +G VF WG    G+LG    +  S  P++++ L    +
Sbjct: 548 SGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYH 607

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           + + +     +  ++ +GE+ T+G N+ G   +G   ++    P ++ D L    V+K A
Sbjct: 608 ITTAAVSYHHSAVVSSNGELLTFGMNDCGQ--LGLDHTQHQHTP-QVVDALSSQVVTKAA 664

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL---KVKSVACGPWH 432
           CG +HT   ++ G+++++G   +G LG G+ +N+  P  V++  G    K+ +V+CG +H
Sbjct: 665 CGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYH 724

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           T  I +            GKL TWG  D G+LG    E K     V   +      ASCG
Sbjct: 725 TVTISE-----------KGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCG 773

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
              ++ L   G+V   G    GQLG       + D  + V    L  + V  I++G Y  
Sbjct: 774 CYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSS 833

Query: 549 AVLT 552
            +LT
Sbjct: 834 YILT 837



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 151/337 (44%), Gaps = 25/337 (7%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           +E E+F  G+   G L        S  + V   S   ++ V+ G      +   G ++T 
Sbjct: 462 EECELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTC 521

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDG 396
           G N  G    G        +       L G+ +S VA   G  H   V++ G +F++G  
Sbjct: 522 GLNKSGQ--CGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYN 579

Query: 397 TFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G LG G+  + S  P+ ++SLR     + A   +H +A+V        SN   G+L T
Sbjct: 580 DRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVV-------SSN---GELLT 629

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G  D G+LG    + +  P  V  L      +A+CG   TV  T  G+VY+ G   +GQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689

Query: 516 LGNPKAKD-RSITVVEGKLKE--EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           LG   A++ ++  +V+  L E  E +  +S G YH   ++  G + TWG+N  GQLG+G 
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            + + +  FV      ++++  CG       C H  I
Sbjct: 750 KEHKNSAQFVPLPMSSKIKNASCG-------CYHSLI 779



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 21/245 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +   ++   H+A+V+  GE+  +G    G+LG         P++V+ LS   V   +CG 
Sbjct: 608 ITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGL 667

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRS-RSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           + T A T  GE+Y++G N++G   +G  R+ ++  L +      D  ++  V+CG +HT 
Sbjct: 668 YHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDE-KIVAVSCGYYHTV 726

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +S  G+L T+G   +G LG G+ ++ +  + V      K+K+ +CG +H+  ++     
Sbjct: 727 TISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILM----- 781

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKL------LPTCVTRLVDFDFVQASCGRMLT 496
              SN   G++  +G  +KG+LG   G R L      LP     L + + V+ + G   +
Sbjct: 782 ---SN---GRVMVFGRNNKGQLGA--GARTLSSADLPLPVPSNSLANDEVVRIAAGFYSS 833

Query: 497 VGLTG 501
             LTG
Sbjct: 834 YILTG 838



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 28/289 (9%)

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T A  +  E+++ G NN+G   +G   S S  L    F +  G+R   VA G    A+V 
Sbjct: 457 TVASFEECELFSCGQNNYGELCLGHCNSTSK-LEHVPFFSAKGIR--DVAGGNEVLAVVM 513

Query: 386 TSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVAC--GPWHTAAIVDIMVD 442
             G +FT G    G  G+G  +  V     V +L G+ +  VA   G  H  A+      
Sbjct: 514 NDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAV------ 567

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-----FDFVQASCGRMLTV 497
                A  G +F+WG  D+G+LG      K   +   R++D     +    A+     + 
Sbjct: 568 -----ASDGAVFSWGYNDRGQLGLGSTISK---SHTPRMIDSLREKYHITTAAVSYHHSA 619

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            ++  G++ T G    GQLG    + +    V   L  + V   + G YH    TS G V
Sbjct: 620 VVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEV 679

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEAL---RDRQVESVVCGSSITAAI 603
           Y++GKN  GQLGLG ++  +TP  V+      D ++ +V CG   T  I
Sbjct: 680 YSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTI 728


>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
 gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
          Length = 429

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 178/376 (47%), Gaps = 54/376 (14%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVS 320
           LD Q+    A+ +    + G V   G+G+ G+LG  +  ++ S P  V+ L  +    V+
Sbjct: 18  LDTQSKRQKARLSLASDEAGIVLVLGQGELGQLGLGEEILERSRPTAVKKLLEVEFIQVA 77

Query: 321 CGEFQTCALTKSGEIYTWGHNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           CG   T ALTK+GEIYTWG N+    G D      S + +LP  L D LD V++ +V+ G
Sbjct: 78  CGGVHTVALTKAGEIYTWGCNDECALGRDT--SDTSEAEYLP-GLVDGLDNVKIIQVSAG 134

Query: 378 EWHTAIVSTSGQLFTYGD-----GTFGVLGHGNLQNVSQPKEVESLRGLK--VKSVACGP 430
           + HTA ++  G++F +G+     G+ G+    NL    QP+ +  L      V  +  G 
Sbjct: 135 DNHTAALADDGRVFCWGNFWDNRGSIGL----NLAG-KQPRPIVMLGDPNDPVIKIGSGN 189

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV----------DGERKLLPTCVTR 480
            H AA+              G +FTWG  ++G+LG V           G ++ L   V R
Sbjct: 190 NHVAALT-----------ANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVAR 238

Query: 481 LV-----DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-------AKDRSITV 528
           +      D  F     G      +   G+V+  G   +GQ+GN         AK  S++ 
Sbjct: 239 VTQRSKKDIRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDSLSA 298

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERETPTFVEALRD 587
           +     E  +  I+SG +H  +L   G VY+ G+   G+LGLG D +E   PT +E L +
Sbjct: 299 LNDGNDERQIL-IASGEHHTLILARNGRVYSIGRGDYGRLGLGPDVKECSHPTEIETLAN 357

Query: 588 RQVESVVCGSSITAAI 603
             +++V CG +++ A+
Sbjct: 358 SDIKAVTCGLAVSFAV 373



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 34/322 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP L++    + +  +S G  H A +  +G VFCWG   D R    +N+    P+ +  L
Sbjct: 116 LPGLVDGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVML 175

Query: 312 SGIN--VQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER---RSRSHWLPRKLFDT 365
              N  V  +  G     ALT +G I+TWG    G    V ER   R     L R L   
Sbjct: 176 GDPNDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPA 235

Query: 366 L--------DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           +          +R S +  G ++   V+ +G++F  G   +G +G+GN+ ++    +++S
Sbjct: 236 VARVTQRSKKDIRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQIGNGNITSLYYLAKIDS 295

Query: 418 LRGLKVKS------VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGE 470
           L  L   +      +A G  HT  +           A  G++++ G  D GRLG   D +
Sbjct: 296 LSALNDGNDERQILIASGEHHTLIL-----------ARNGRVYSIGRGDYGRLGLGPDVK 344

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-RSITVV 529
               PT +  L + D    +CG  ++  ++  G VY+ G   + QLG+    D  + T+V
Sbjct: 345 ECSHPTEIETLANSDIKAVTCGLAVSFAVSNSGDVYSWGMGTNLQLGSSTDDDILTPTLV 404

Query: 530 EGKLKEEFVKGISSGSYHVAVL 551
           + K    F    S+G  H A+L
Sbjct: 405 KTKESYNFFAA-SAGGQHTAIL 425



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 163/389 (41%), Gaps = 63/389 (16%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS----CPKLV 308
           P  ++  + ++   ++ G  H   +TK GE++ WG   +  LG   + D S     P LV
Sbjct: 62  PTAVKKLLEVEFIQVACGGVHTVALTKAGEIYTWGCNDECALGRDTS-DTSEAEYLPGLV 120

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGH--NNHGA---DLVGERRSRSHWLPRKLF 363
           + L  + +  VS G+  T AL   G ++ WG+  +N G+   +L G++       PR + 
Sbjct: 121 DGLDNVKIIQVSAGDNHTAALADDGRVFCWGNFWDNRGSIGLNLAGKQ-------PRPIV 173

Query: 364 DTLD-GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH-----------GNLQNVSQ 411
              D    V K+  G  H A ++ +G +FT+G G  G LG              L+   Q
Sbjct: 174 MLGDPNDPVIKIGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQ 233

Query: 412 PKEVE----SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
           P        S + ++   +  GP++  A+          NA  G++F  G  + G++G+ 
Sbjct: 234 PAVARVTQRSKKDIRFSDIFVGPYNLFAV----------NA-AGEVFACGLNNYGQIGNG 282

Query: 468 DGERKLLPTCVTRLVDFDFVQA------------SCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +       T +  L   D + A            + G   T+ L   G+VY++G   +G+
Sbjct: 283 N------ITSLYYLAKIDSLSALNDGNDERQILIASGEHHTLILARNGRVYSIGRGDYGR 336

Query: 516 LG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           LG  P  K+ S       L    +K ++ G      +++ G VY+WG   N QLG     
Sbjct: 337 LGLGPDVKECSHPTEIETLANSDIKAVTCGLAVSFAVSNSGDVYSWGMGTNLQLGSSTDD 396

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAI 603
           +  TPT V+        +   G   TA +
Sbjct: 397 DILTPTLVKTKESYNFFAASAGGQHTAIL 425



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +E+    D++ ++ G   +  V+  G+V+ WG G + +LG   + D+  P LV+   
Sbjct: 349 PTEIETLANSDIKAVTCGLAVSFAVSNSGDVYSWGMGTNLQLGSSTDDDILTPTLVKTKE 408

Query: 313 GINVQSVSCGEFQTCALTK 331
             N  + S G   T  L K
Sbjct: 409 SYNFFAASAGGQHTAILGK 427


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSSGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL +
Sbjct: 315 ------GPSDTSK---PTHSEALTE 330



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 154/318 (48%), Gaps = 37/318 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDAHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HGQLGNPKAK---------DRSITVVEGKLK 534
            Q  CG   T     L  V+T G  V   HG     K           D S  +    L 
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFDISCLISAEDLV 344

Query: 535 EEFVKGISSGSYHVAVLT 552
           +  VK I +G+Y   V T
Sbjct: 345 DVHVKHIFAGTYANFVTT 362



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 150/326 (46%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--TDSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L G+K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 173/378 (45%), Gaps = 74/378 (19%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           +V+ WG G DG+LG     D   P+L+   S  ++  ++CG     ALT  G+++TWG  
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           + G   +G     +  LP KL    D   +++ A G  H+  VS SG +FT G+G+FG L
Sbjct: 76  SSGQ--LGHGDILNITLP-KLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           GHG+  ++S P +V       VK VACG  H+  +             G ++  +G   +
Sbjct: 133 GHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLF-----------AGNQVCGFGSGKR 181

Query: 462 GRLGHVDGERKL--LPTCVTRLVDFDFVQAS----------------------CG----- 492
           G+LG      K   LP  V+ L D + V+ S                      CG     
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVH 241

Query: 493 -----------RMLTVG------LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
                      R + VG      LT  G+V+ +GS ++ Q   P+ +   I   E   ++
Sbjct: 242 APQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEK 298

Query: 536 --EF----VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA----L 585
             +F    V  I++G+ H A +T  G V TWG   +GQLGLG++ ++ +P  V      L
Sbjct: 299 VPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDL 358

Query: 586 RDRQVESVVCGSSITAAI 603
           R ++++ V CGS  T A+
Sbjct: 359 RTKEIK-VYCGSGFTYAV 375


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 32/323 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  +NV  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G  + + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L   GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVISFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEAL 585
             +         ++  PT  EAL
Sbjct: 315 GPS---------DKSKPTHPEAL 328



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 141/271 (52%), Gaps = 28/271 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L+V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  + +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSIGALKNLGVIYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA ++             GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDEHTAVLIQ-----------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HG 514
            Q  CG   T     L  V+T G  +   HG
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVISFGHG 315



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 29/261 (11%)

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  + + A GE H+ ++ T+ ++ + GD + G LG         P+ +++L  L V  V+
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDF 484
           CG  H+ A+       C      G++F WG   +G+LG   GE K     P  +T L   
Sbjct: 82  CGKEHSLAV-------CHK----GRVFAWGAGSEGQLG--IGEFKEISFTPKKITTLNGI 128

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVK 539
             +Q SCG   ++ L+   +V++ G   HGQLG  K     A  + +  +EG      + 
Sbjct: 129 KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIP----LA 184

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCG 596
            +++G  H   L+  G+ + WG N+ GQL L       +   P  + AL++  V  + CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244

Query: 597 SSITAAICLH-KSISVGDQSS 616
              TA +    K  + GD SS
Sbjct: 245 DEHTAVLIQDGKVFTFGDNSS 265



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA++   G++FT+GD + G LG+        P
Sbjct: 220 VPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 143/326 (43%), Gaps = 34/326 (10%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV--NMDVSCPKLVEC 310
            P   E+   +   ++S G   +  +  +G ++ WG+   G+LG  V  N   + P  VE 
Sbjct: 752  PSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEA 811

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL--PRKLFDTLDG 368
             +GI     S G     AL+  G IYTWG N+ G   +G   + ++    P K  DT   
Sbjct: 812  PAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQ--LGRTVTSNNPADKPGKA-DTPAD 868

Query: 369  VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVA 427
            V  + V+ G+ HT  V T G ++T+GD T G LG         +P + ++  G+     +
Sbjct: 869  VTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQAS 928

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD---- 483
             G  H+ A+ D            G ++TWGD   GRLG    +  + P       D    
Sbjct: 929  AGESHSVAVSD-----------DGSIYTWGDTANGRLGR---DTNITPADKPGKADTPAG 974

Query: 484  FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
              F QAS G   ++ L   G +YT G +     G P   D    +        F +  + 
Sbjct: 975  VTFTQASAGGKHSIALGSDGSLYTWGDSGKTSAGRPNKVDTPAGIT-------FTQASAG 1027

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLG 569
             SY +A L S G++Y+WG NA GQLG
Sbjct: 1028 ASYCLA-LGSDGNLYSWGDNAKGQLG 1052



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 148/329 (44%), Gaps = 34/329 (10%)

Query: 270  GAKHAALVTKEGEVFCWGEGKDGRLGHKV-NMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
            G  H+A V  +G ++ WG+   G+LG    +   S P   E  +G+    VS G   + A
Sbjct: 716  GDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVA 775

Query: 329  LTKSGEIYTWGHNNHGADLVGERRSRSHWL--PRKLFDTLDGVRVSKVACGEWHTAIVST 386
            L   G +Y+WG N+ G   +G   + ++    P K+ +   G+   + + G  H   +S+
Sbjct: 776  LASDGSLYSWGDNSRGQ--LGRTVTSNNPANRPHKV-EAPAGITFVQASAGGSHVVALSS 832

Query: 387  SGQLFTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
             G ++T+GD + G LG     N    +P + ++   +   SV+ G  HT A VD      
Sbjct: 833  DGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVA-VDTQ---- 887

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++TWGD   G LG          P          F QAS G   +V ++  G
Sbjct: 888  ------GDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDG 941

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI-----SSGSYHVAVLTSGGSVY 558
             +YT G   +G+LG    +D +IT  +   K +   G+     S+G  H   L S GS+Y
Sbjct: 942  SIYTWGDTANGRLG----RDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGSLY 997

Query: 559  TWGKNANGQLGLGDSQERETP---TFVEA 584
            TWG   +G+   G   + +TP   TF +A
Sbjct: 998  TWGD--SGKTSAGRPNKVDTPAGITFTQA 1024



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 26/266 (9%)

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           GI +     G+  + A+   G +YTWG N+HG  L  +   +    P K  +   GV   
Sbjct: 707 GIRISQADGGDLHSAAVGSDGSLYTWGDNSHG-QLGRDTADKPDSHPSKA-EAPAGVTFV 764

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKVKSVACGP 430
            V+ G   +  +++ G L+++GD + G LG     N   ++P +VE+  G+     + G 
Sbjct: 765 HVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGG 824

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTCVTRLVDFDFVQ 488
            H  A+           +  G ++TWGD   G+LG           P       D  F  
Sbjct: 825 SHVVAL-----------SSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTS 873

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI-----SS 543
            S G+  TV +   G VYT G   HG+LG    +  + T  +   K +   GI     S+
Sbjct: 874 VSAGQGHTVAVDTQGDVYTWGDNTHGELG----RSTTSTPADKPGKADTPAGITFTQASA 929

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLG 569
           G  H   ++  GS+YTWG  ANG+LG
Sbjct: 930 GESHSVAVSDDGSIYTWGDTANGRLG 955



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 38/254 (14%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV--NMDVSCPKLVEC 310
            P  +E+   +     S G  H   ++ +G ++ WG+   G+LG  V  N     P   + 
Sbjct: 806  PHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADT 865

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             + +   SVS G+  T A+   G++YTWG N HG +L     S     P K  DT  G+ 
Sbjct: 866  PADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHG-ELGRSTTSTPADKPGKA-DTPAGIT 923

Query: 371  VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACG 429
             ++ + GE H+  VS  G ++T+GD   G LG   N+    +P + ++  G+     + G
Sbjct: 924  FTQASAGESHSVAVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAG 983

Query: 430  PWHTAAI----------------------VDIMV-----------DRCKSNAIGGKLFTW 456
              H+ A+                      VD                C +    G L++W
Sbjct: 984  GKHSIALGSDGSLYTWGDSGKTSAGRPNKVDTPAGITFTQASAGASYCLALGSDGNLYSW 1043

Query: 457  GDADKGRLGHVDGE 470
            GD  KG+LG   G+
Sbjct: 1044 GDNAKGQLGRDTGD 1057



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 55/348 (15%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-------KVNMDVSC- 304
           P L+     +    +S G  H   +  +G ++ WG   DG LG        K N  +   
Sbjct: 209 PSLVNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQ 268

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG------ADLVGERRSRSHWL 358
           PKLV   +G++      G++ + AL   G +Y+WG N +G         + + +     L
Sbjct: 269 PKLVTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNL 328

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH---GNLQNVSQPKEV 415
           P+ +       ++++++ G +++  + + G L+++GD T+  LG    G       P+++
Sbjct: 329 PKGI------TKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKM 382

Query: 416 ESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG----- 469
               G+ K   +  G W + A            +  G L++WG  + G+LG         
Sbjct: 383 TMPAGVKKFTWIKAGEWTSLAT-----------SSDGSLYSWGWNEYGQLGRNTAPARQD 431

Query: 470 --ERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
              RK+ +P  VT+     F + S     ++ L   G +Y+ G     QLG      +  
Sbjct: 432 RTPRKVTMPAGVTK-----FTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAK-Y 485

Query: 527 TVVEGKLK-----EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            V  GK+       +F + +S+G  H   + S G++Y+WG+N  G+LG
Sbjct: 486 DVKPGKVPTPAGVAQFTE-VSAGYSHSLAIGSDGNLYSWGQNKYGELG 532



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 134/318 (42%), Gaps = 43/318 (13%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG     G++G     +  ++  Q+D   PKL+     +       G  H+  +  +G +
Sbjct: 242 WGNNA-DGELGRETVSTTPKDNPQIDNQ-PKLVTPPAGVHFTQACAGKWHSLALGSDGNL 299

Query: 284 FCWGEGKDGRLGHKVN---MDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWG 339
           + WGE K G LG        DV  P  V    GI  +  +S G F + AL   G++Y+WG
Sbjct: 300 YSWGENKYGELGRDTGSAIYDVK-PGKVNLPKGITKITQISAGTFYSMALDSDGDLYSWG 358

Query: 340 HNNHGADLVGER------RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            N +  D +G        R RS   PRK+       + + +  GEW +   S+ G L+++
Sbjct: 359 DNTY--DELGRYAGGYPFRDRS---PRKMTMPAGVKKFTWIKAGEWTSLATSSDGSLYSW 413

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--G 451
           G   +G LG    +N +  ++  + R + +      P        +  +   S A+G  G
Sbjct: 414 GWNEYGQLG----RNTAPARQDRTPRKVTM------PAGVTKFTKVSAEHRHSLALGSDG 463

Query: 452 KLFTWGDADKGRLGHVDGERKL--------LPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
            L++WG  D  +LG   G  K          P  V +     F + S G   ++ +   G
Sbjct: 464 NLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQ-----FTEVSAGYSHSLAIGSDG 518

Query: 504 KVYTMGSAVHGQLGNPKA 521
            +Y+ G   +G+LG P +
Sbjct: 519 NLYSWGQNKYGELGRPTS 536



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 49/283 (17%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLV-GERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           V   E  + A+   G +Y WG NN+       E+R+ S      L +   GV  ++V+ G
Sbjct: 173 VPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDEKRTPS------LVNPPTGVHFTQVSTG 226

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGH--------GNLQNVSQPKEVESLRGLKVKSVACG 429
             H   + + G L+++G+   G LG          N Q  +QPK V    G+       G
Sbjct: 227 YTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAG 286

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE--------RKLLPTCVTRL 481
            WH+ A+              G L++WG+   G LG   G         +  LP  +T++
Sbjct: 287 KWHSLAL-----------GSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKI 335

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRS---ITVVEGKLK 534
                 Q S G   ++ L   G +Y+ G   + +LG        +DRS   +T+  G  K
Sbjct: 336 T-----QISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKK 390

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
             ++K   +G +     +S GS+Y+WG N  GQLG   +  R+
Sbjct: 391 FTWIK---AGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQ 430



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 24/194 (12%)

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTC 477
           RG+++     G  H+AA+              G L+TWGD   G+LG    ++    P+ 
Sbjct: 706 RGIRISQADGGDLHSAAV-----------GSDGSLYTWGDNSHGQLGRDTADKPDSHPSK 754

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG------NPKAKDRSITVVEG 531
                   FV  S G   +V L   G +Y+ G    GQLG      NP  +      VE 
Sbjct: 755 AEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHK---VEA 811

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG--LGDSQERETPTFVEALRDRQ 589
                FV+  S+G  HV  L+S G++YTWG N+ GQLG  +  +   + P   +   D  
Sbjct: 812 PAGITFVQ-ASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVT 870

Query: 590 VESVVCGSSITAAI 603
             SV  G   T A+
Sbjct: 871 FTSVSAGQGHTVAV 884



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 21/188 (11%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
            D   DV  WG+            G + ++ T   A  P   ++   +     S G  H+ 
Sbjct: 885  DTQGDVYTWGDNT---------HGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSV 935

Query: 276  LVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGE 334
             V+ +G ++ WG+  +GRLG   N+     P   +  +G+     S G   + AL   G 
Sbjct: 936  AVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGS 995

Query: 335  IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
            +YTWG  + G    G         P K+ DT  G+  ++ + G  +   + + G L+++G
Sbjct: 996  LYTWG--DSGKTSAGR--------PNKV-DTPAGITFTQASAGASYCLALGSDGNLYSWG 1044

Query: 395  DGTFGVLG 402
            D   G LG
Sbjct: 1045 DNAKGQLG 1052



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
           P++  +++T+     +   +     G  H A + S GS+YTWG N++GQLG   + + ++
Sbjct: 691 PESGGQTVTLTPPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDS 750

Query: 579 -PTFVEALRDRQVESVVCGSSITAAICLHKSI-SVGDQS 615
            P+  EA        V  G   + A+    S+ S GD S
Sbjct: 751 HPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNS 789


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 30/339 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G +H A+VT   +++ +G    G+LG      VS P  ++ L    V+ V+CG   T
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G N+ G   +G+   R+ +   K F +    ++ +++ G   +A ++ 
Sbjct: 100 IVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQH--KIKQLSAGSSSSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ NV  P +V    G  +  V+CG +H+A I          
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQV--TIGKPISWVSCGYYHSAFIT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G+L+T+G+ + G+LG      KLL     P  V  + +   +Q +CG   TV LT 
Sbjct: 207 --TEGELYTFGEPESGKLGL---PSKLLINHRIPQLVPGIPE-KVIQVACGGGHTVVLTE 260

Query: 502 LGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
              VYT G    GQ  LG    +    TV+E  +K++ +  IS G  H A++T  G +YT
Sbjct: 261 -NAVYTFGLGQFGQLGLGTFIFETSEPTVIE-HIKDQKISYISCGENHTALITDTGLIYT 318

Query: 560 WGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
           +G   +G+LGLG  +   +  PT   + R   V+ V CG
Sbjct: 319 FGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACG 357



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 51/276 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +ACG+ HTA+V+ + +L+ +G   +G LG G+   VS+P  +++L+  KVK VACG  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 434 -AAIVDIMVDRCKSNAIG-----------------------------------------G 451
             A     V     N+ G                                         G
Sbjct: 100 IVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTEDG 159

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  + +   +P  VT      +V  SCG   +  +T  G++YT G  
Sbjct: 160 ELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWV--SCGYYHSAFITTEGELYTFGEP 217

Query: 512 VHGQLGNPKA---KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
             G+LG P       R   +V G + E+ ++ ++ G  H  VLT   +VYT+G    GQL
Sbjct: 218 ESGKLGLPSKLLINHRIPQLVPG-IPEKVIQ-VACGGGHTVVLTEN-AVYTFGLGQFGQL 274

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG    E   PT +E ++D+++  + CG + TA I
Sbjct: 275 GLGTFIFETSEPTVIEHIKDQKISYISCGENHTALI 310



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 116/236 (49%), Gaps = 25/236 (10%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           +T++GE+F WG+  +G++G K   +V  P  V    G  +  VSCG + +  +T  GE+Y
Sbjct: 155 LTEDGELFMWGDNSEGQIGLKNIDNVCVPHQVTI--GKPISWVSCGYYHSAFITTEGELY 212

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHTAIVSTSGQLFTYG 394
           T+G    G   +  +   +H +P+     + G+  +V +VACG  HT +V T   ++T+G
Sbjct: 213 TFGEPESGKLGLPSKLLINHRIPQ----LVPGIPEKVIQVACGGGHT-VVLTENAVYTFG 267

Query: 395 DGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
            G FG LG G  +   S+P  +E ++  K+  ++CG  HTA I D            G +
Sbjct: 268 LGQFGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALITDT-----------GLI 316

Query: 454 FTWGDADKGR--LGHVDGERKLLPT--CVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           +T+GD   G+  LG  +   + +PT  C +R      V      ML      LG V
Sbjct: 317 YTFGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACGGCHMLVFATPRLGVV 372



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 31/291 (10%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +G   +  VS+  T + AL P+         V+ ++ G  H  + T+ G+V+  G   
Sbjct: 65  GQLGLGSESPVSK-PTCIKALKPE--------KVKFVACGRTHTIVATEGGKVYATGGNS 115

Query: 291 DGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
           +G+LG   + D +    ++  +  + ++ +S G   + ALT+ GE++ WG N+ G   +G
Sbjct: 116 EGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTEDGELFMWGDNSEGQ--IG 173

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQ 407
            +   +  +P ++  T+ G  +S V+CG +H+A ++T G+L+T+G+   G LG  +  L 
Sbjct: 174 LKNIDNVCVPHQV--TI-GKPISWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLI 230

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-H 466
           N   P+ V  +   KV  VACG  HT  + +        NA+    +T+G    G+LG  
Sbjct: 231 NHRIPQLVPGIPE-KVIQVACGGGHTVVLTE--------NAV----YTFGLGQFGQLGLG 277

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                   PT +  + D      SCG   T  +T  G +YT G   HG+LG
Sbjct: 278 TFIFETSEPTVIEHIKDQKISYISCGENHTALITDTGLIYTFGDGRHGKLG 328


>gi|345491150|ref|XP_001607453.2| PREDICTED: hypothetical protein LOC100123748 [Nasonia vitripennis]
          Length = 707

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 163/345 (47%), Gaps = 29/345 (8%)

Query: 249 DALLPK---LLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           + L P+   +  SA+ LD V  +  GA H   + + G+VF  G    G+ G  V    S 
Sbjct: 26  EVLAPRKVCVFPSAMRLDEVIKMVGGAGHTLFLDQRGQVFSCGWNDKGQAG--VPTCSST 83

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
            + VE LS   +  V+CG   + ALT+ G+++ WG N+HG   +G R       PRKL  
Sbjct: 84  FQKVEALSNERITDVACGWDSSMALTREGDVFVWGSNSHGQ--LGLRDVDKVSEPRKLVG 141

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KV 423
            +DG +  +++ G  H+AIVST G+L   G    G LG  +LQ     +   ++  L  V
Sbjct: 142 EVDGRKFQRISMGLRHSAIVSTDGELLVSGASNKGQLG-VDLQGARCSESFLTVSDLPPV 200

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
           + VAC   HT AI           +   +LF WGD   G+LG +D ++  + T   ++ +
Sbjct: 201 REVACAQHHTVAI-----------SRDNQLFAWGDNKHGQLG-IDPQKGKIVTTAAKVEN 248

Query: 484 FDFVQAS----CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
              V  +    CG   T   + +  +Y+ G   +GQL  PK    S     G    + + 
Sbjct: 249 GSEVNNTSRIYCGWTHTCLYSSV--LYSWGRNSYGQLARPKDTPVSECWKAGVALNDDLH 306

Query: 540 GISSGSYHVAVLT-SGGSVYTWGKNANGQLGLGDSQERETPTFVE 583
            IS GS H   LT S G+V  WG N +G  G G +Q+   PT V+
Sbjct: 307 SISVGSEHNMALTGSSGTVLAWGWNEHGNCGTGSTQDVFRPTEVK 351



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 39/290 (13%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR---VSKVACGEWHTAIVSTSGQLF 391
           +Y+WG N+HG   +G+ +      PRK+      +R   V K+  G  HT  +   GQ+F
Sbjct: 6   LYSWGANSHGQLGLGDIKEDEVLAPRKVCVFPSAMRLDEVIKMVGGAGHTLFLDQRGQVF 65

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           + G    G  G     +  Q  +VE+L   ++  VACG W          D   +    G
Sbjct: 66  SCGWNDKGQAGVPTCSSTFQ--KVEALSNERITDVACG-W----------DSSMALTREG 112

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-FDFVQASCGRMLTVGLTGLGKVYTMGS 510
            +F WG    G+LG  D ++   P  +   VD   F + S G   +  ++  G++   G+
Sbjct: 113 DVFVWGSNSHGQLGLRDVDKVSEPRKLVGEVDGRKFQRISMGLRHSAIVSTDGELLVSGA 172

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEF--------VKGISSGSYHVAVLTSGGSVYTWGK 562
           +  GQLG        + +   +  E F        V+ ++   +H   ++    ++ WG 
Sbjct: 173 SNKGQLG--------VDLQGARCSESFLTVSDLPPVREVACAQHHTVAISRDNQLFAWGD 224

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVES---VVCGSSITAAICLHKSI 609
           N +GQLG+   + +   T  +     +V +   + CG + T   CL+ S+
Sbjct: 225 NKHGQLGIDPQKGKIVTTAAKVENGSEVNNTSRIYCGWTHT---CLYSSV 271



 Score = 40.4 bits (93), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 24/176 (13%)

Query: 505 VYTMGSAVHGQLGNPKAKD------RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           +Y+ G+  HGQLG    K+      R + V    ++ + V  +  G+ H   L   G V+
Sbjct: 6   LYSWGANSHGQLGLGDIKEDEVLAPRKVCVFPSAMRLDEVIKMVGGAGHTLFLDQRGQVF 65

Query: 559 TWGKNANGQLGLGDSQERETPTF--VEALRDRQVESVVCGSSITAAICL----------- 605
           + G N  GQ G+       + TF  VEAL + ++  V CG   + A+             
Sbjct: 66  SCGWNDKGQAGVPTC----SSTFQKVEALSNERITDVACGWDSSMALTREGDVFVWGSNS 121

Query: 606 HKSISVGDQSSCSQCRMPFG-FRRKKHNCYNCGLHFCSACSTKKIINASLTPNKGK 660
           H  + + D    S+ R   G    +K    + GL   +  ST   +  S   NKG+
Sbjct: 122 HGQLGLRDVDKVSEPRKLVGEVDGRKFQRISMGLRHSAIVSTDGELLVSGASNKGQ 177


>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
          Length = 376

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 32/354 (9%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
            IS G  H+ L T +G+++ WG+G  GRLG      V  P L       +++ ++ G   
Sbjct: 36  GISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLH 94

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           + ALT  G+++TWG+   GA  +G +      +PR++ D+ D  ++S +A    HTA ++
Sbjct: 95  SVALTHQGDVFTWGYGGFGA--LGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAIT 151

Query: 386 TSGQLFTYG--DGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            SG+L+ +G  +G   +             +S P +V++L  + V SV+CG + T A+  
Sbjct: 152 ESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK 210

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                       G+L+ WG      LG  D      P  V  L      Q +CG   ++ 
Sbjct: 211 E-----------GQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           LT  GKV + G   HGQLG+   +++ +      L ++ +  I+SG    A +T GG ++
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELW 319

Query: 559 TWGKNANGQLGL-GDSQERETPTFVEALRD------RQVESVVCGSSITAAICL 605
            WG   + QLG+ G  + + TP  V  L +       +V S+  G+S   A+CL
Sbjct: 320 MWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS--HALCL 371



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 160/358 (44%), Gaps = 53/358 (14%)

Query: 217 ILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           I  D+ IWG+G  GG +G        +N   V  L P   E ++    + I+LG  H+  
Sbjct: 48  IDGDLWIWGKGD-GGRLGFG-----QENSVFVPNLNPLFEEHSI----RCIALGGLHSVA 97

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           +T +G+VF WG G  G LGHKV      P+ V+      + +++     T A+T+SGE+Y
Sbjct: 98  LTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELY 157

Query: 337 TWGHN--------------NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            WG                N G  L    + ++  +P           V+ V+CG + T 
Sbjct: 158 MWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-----------VASVSCGGFFTM 206

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            ++  GQL+ +G  +   LG G+     +P  V SL G+++  +ACG +H+ A+ +    
Sbjct: 207 ALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEE--- 263

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   GK+ +WG    G+LG      + +PT +  L D   V  + G   +  +T  
Sbjct: 264 --------GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDG 315

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVE-GKLKEEF------VKGISSGSYHVAVLTS 553
           G+++  G+A   QLG P   +   T VE   L EE       V  IS G+ H   L S
Sbjct: 316 GELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 373


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 178/362 (49%), Gaps = 25/362 (6%)

Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALL-PKLLESAVMLDVQNISLGAKHAALVTKEGEVFC 285
           GV G   G + DG +S   ++  ++L PK +     LD++ IS G KH  +VTK+G+++ 
Sbjct: 3   GVFGW--GRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYS 60

Query: 286 WGEGKDGRLGHK------VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G  + G LGH       V++DV   +LV  LS + V   + G   +  +T +GE+++WG
Sbjct: 61  CGSNEYGELGHSKPRSRAVSIDVV--ELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG 118

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G    G+        P KL  +L    V ++ CG  H   ++  G+LF++G   +G
Sbjct: 119 RNDKGQLGRGKLSKEEERKP-KLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYG 177

Query: 400 VLGHGNLQNV-SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG G+  +    P+++  LRG+ +  +A G  H+  +         S A+    F WG 
Sbjct: 178 QLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILT-------WSRAV----FGWGK 226

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LG  D   K  PT    L +   +  SCG   TV LT  G V++ G+   GQLG+
Sbjct: 227 NSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGH 286

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
              ++  +     +L    +  ++ G  H VA   S G +Y +G   +GQLGLGD+  R 
Sbjct: 287 NSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDTSARN 346

Query: 578 TP 579
           +P
Sbjct: 347 SP 348



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 21/329 (6%)

Query: 283 VFCWGEGKDGRL--GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           VF WG   DG+L  G      +  PK V  L  ++++ +SCGE  T  +TK G++Y+ G 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 341 NNHGADLVGERRSRSHWLP---RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           N +G   +G  + RS  +     +L  +L  ++V + A G   + +++T+G++F++G   
Sbjct: 64  NEYGE--LGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRND 121

Query: 398 FGVLGHGNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
            G LG G L  +   +PK ++SL    V  + CG  H  A+ D            G+LF+
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTD-----------DGRLFS 170

Query: 456 WGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
           WG    G+LG          P  +  L      Q + G   +  LT    V+  G    G
Sbjct: 171 WGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFG 230

Query: 515 QLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           QLG     D+S   +   L+ + V  IS G  H   LT  G V+++G    GQLG   +Q
Sbjct: 231 QLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQ 290

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAI 603
               P  V  L    +  V CG   T A 
Sbjct: 291 NEILPKRVMELMGSVISQVACGRRHTVAF 319


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 29/362 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKT-QVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           V+ WG+   G  +G   DG+ +  +T  +   LPK  E      V   + G  H+  VT 
Sbjct: 64  VLAWGDNYYG-QLG---DGTTNNYRTVPIPVGLPKGTE------VTAAAGGDAHSLAVTS 113

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            G V  WG    G+LG    ++ S P  V    G  V +V+ G   + ALT +G ++ WG
Sbjct: 114 AGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWG 173

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G    G R +RS  +         G  ++ VA G  H+  ++++G +F +GD + G
Sbjct: 174 DNSTGQLGDGTRTNRSTPVAVSF---PSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTG 230

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LG G   N S P  V    G  V ++A G  H+ A+              G    WG+ 
Sbjct: 231 QLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSA-----------GNARAWGNN 279

Query: 460 DKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRML-TVGLTGLGKVYTMGSAVHGQLG 517
             G+LG  DG        V  RL     V A  G +  ++ LT +G V + GS   GQLG
Sbjct: 280 FVGQLG--DGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLG 337

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
           +  A+DR+            +  +++G      LTS G+V  WG N  GQLG G +  R 
Sbjct: 338 DGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRR 397

Query: 578 TP 579
           TP
Sbjct: 398 TP 399



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 114/269 (42%), Gaps = 19/269 (7%)

Query: 331 KSGEIYTWGHNNHGADLVGERRS-RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            S  +  WG N +G    G   + R+  +P  L     G  V+  A G+ H+  V+++G 
Sbjct: 60  ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGL---PKGTEVTAAAGGDAHSLAVTSAGT 116

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
           +  +G    G LG G   N S P +V    G  V +VA G  H+ A+             
Sbjct: 117 VLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSA---------- 166

Query: 450 GGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
            G +F WGD   G+LG  DG R  +  P  V+          + G M ++ LT  G V+ 
Sbjct: 167 -GTVFAWGDNSTGQLG--DGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFA 223

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G    GQLG+    +RS  VV G      V  I+ G  H   +TS G+   WG N  GQ
Sbjct: 224 WGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQ 283

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCG 596
           LG G +  R+    V       V +V  G
Sbjct: 284 LGDGSNINRDASVHVRLPPGTTVTAVAGG 312


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  124 bits (311), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 35/263 (13%)

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G +    ++  G++YTWG N  G   +G   SR   LP +L   L  V V   +CG  HT
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQ--LGRDYSRLWSLPSELH--LPNVFVVSASCGGMHT 56

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++S  G++F++GDG  G LGHGN +N S P+ + SL   ++  +A G  H+ AI D   
Sbjct: 57  LLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDD--- 113

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGL 499
                    GKLFTWG  + GRLGH +      P  V RL  +    + AS     +   
Sbjct: 114 --------DGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC 165

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG----------ISSGSYHVA 549
              G V+T G   HGQLG        +   E  L+   VK           +S G  H A
Sbjct: 166 CENGTVWTWGLGEHGQLG--------VGSTESHLEPVLVKSMADANLHIVEVSCGGAHTA 217

Query: 550 VLTSGGSVYTWGKNANGQLGLGD 572
            +T+ G++ TWG+   GQLG G+
Sbjct: 218 AVTNDGTLLTWGRGDWGQLGHGN 240



 Score =  121 bits (304), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 83/252 (32%), Positives = 134/252 (53%), Gaps = 17/252 (6%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  HAALV+  G+V+ WG    G+LG   +   S P  +  L  + V S SCG   T  L
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLL 59

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           +K G+++++G   +G   +G    R++ LP+ +  +L+  R++ +A G  H+  +   G+
Sbjct: 60  SKEGKVFSFGDGANGR--LGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAIDDDGK 116

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS-VACGPWHTAAIVDIMVDRCKSNA 448
           LFT+G G  G LGHGN+ +V +P+ V+ L  +++K+ +A G +  +A+       C  N 
Sbjct: 117 LFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAV-------CCEN- 168

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF--VQASCGRMLTVGLTGLGKVY 506
             G ++TWG  + G+LG    E  L P  V  + D +   V+ SCG   T  +T  G + 
Sbjct: 169 --GTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLL 226

Query: 507 TMGSAVHGQLGN 518
           T G    GQLG+
Sbjct: 227 TWGRGDWGQLGH 238



 Score =  105 bits (263), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 29/253 (11%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           L DV  WG    G          + ++ +++ +L  +L    V   V + S G  H  L+
Sbjct: 11  LGDVYTWGANFFG---------QLGRDYSRLWSLPSELHLPNVF--VVSASCGGMHTLLL 59

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           +KEG+VF +G+G +GRLGH    + S P+ +  L    +  ++ G   + A+   G+++T
Sbjct: 60  SKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFT 119

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV-SKVACGEW-HTAIVSTSGQLFTYGD 395
           WG  N G   +G       W PR   D L  +R+ + +A G + H+A+   +G ++T+G 
Sbjct: 120 WGCGNAGR--LGHGNVLDVWRPR-FVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGL 176

Query: 396 GTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G  G LG G+ ++  +P  V+S+    L +  V+CG  HTAA+ +            G L
Sbjct: 177 GEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTN-----------DGTL 225

Query: 454 FTWGDADKGRLGH 466
            TWG  D G+LGH
Sbjct: 226 LTWGRGDWGQLGH 238



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 16/231 (6%)

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G +H A+VS  G ++T+G   FG LG    +  S P E+  L  + V S +CG  HT  +
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLL 59

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                      +  GK+F++GD   GRLGH +     LP  +  L        + G   +
Sbjct: 60  -----------SKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHS 108

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI-SSGSY-HVAVLTSG 554
           + +   GK++T G    G+LG+    D        +L    +K + +SGSY H AV    
Sbjct: 109 MAIDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN 168

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE--SVVCGSSITAAI 603
           G+V+TWG   +GQLG+G ++    P  V+++ D  +    V CG + TAA+
Sbjct: 169 GTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAV 219



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 5/157 (3%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP+ + S     +  I+ G  H+  +  +G++F WG G  GRLGH   +DV  P+ V+ L
Sbjct: 86  LPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRL 145

Query: 312 SGINVQS-VSCGEFQTCAL-TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG- 368
             I +++ ++ G +   A+  ++G ++TWG   HG   VG   + SH  P  +    D  
Sbjct: 146 YRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGS--TESHLEPVLVKSMADAN 203

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
           + + +V+CG  HTA V+  G L T+G G +G LGHGN
Sbjct: 204 LHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 13/177 (7%)

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           GP+H A +  +           G ++TWG    G+LG        LP+ +  L +   V 
Sbjct: 1   GPYHAALVSGL-----------GDVYTWGANFFGQLGRDYSRLWSLPSEL-HLPNVFVVS 48

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
           ASCG M T+ L+  GKV++ G   +G+LG+   ++ S+      L+ + +  I++G  H 
Sbjct: 49  ASCGGMHTLLLSKEGKVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHS 108

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAIC 604
             +   G ++TWG    G+LG G+  +   P FV+ L R R    +  GS   +A+C
Sbjct: 109 MAIDDDGKLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC 165


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 155/331 (46%), Gaps = 28/331 (8%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVE----CLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           ++CWGEG  G+LG      VS P          +   V  V+CGE  T  L   G + + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 339 GHNNHGADLVGER----RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           G N+ G   +G R    + +  + P +L   L+  +V  V+CG+ H+  V   G+++++G
Sbjct: 62  GDNSRGQ--LGRRLPSGQEKRSYGP-ELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWG 118

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            GTFG LG G L +   PK + +L   KV  VACG  H+ A+ +            G++F
Sbjct: 119 AGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTN-----------DGRIF 167

Query: 455 TWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +WG    G+LG   D   +  P  V+ L      Q + G   +  L+  G VY  G    
Sbjct: 168 SWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNA 227

Query: 514 GQLGNPKAKDRSITVVE---GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            QLG  +AK +           L+   V  +S G+ H AVLT  GSVYT+G ++ GQLG 
Sbjct: 228 HQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGR 287

Query: 571 GDSQE-RETPTFVEALRDRQVESVVCGSSIT 600
             S   +  P  VE + D  V  + CGS  T
Sbjct: 288 NSSSSPKFGPQKVEWI-DGPVSLLACGSYHT 317



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 146/301 (48%), Gaps = 39/301 (12%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR------VSKVACGEWHTAIVSTSG 388
           +Y WG  + G   +G+    S  +P +      G R      V  VACGE HT ++   G
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFR-----PGPRAPADQAVVLVACGERHTLLLRDDG 56

Query: 389 QLFTYGDGTFGVLGH----GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            + + GD + G LG     G  +    P+ +++L   KV  V+CG  H+ A+ +      
Sbjct: 57  GVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCN------ 110

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G++++WG    G+LG  +   +L+P  +  L  +  +Q +CG   ++ LT  G+
Sbjct: 111 -----KGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGR 165

Query: 505 VYTMGSAVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           +++ G  +HGQLG     + +A  + ++ ++G    +    +++G  H   L+  G VY 
Sbjct: 166 IFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQ----VAAGGAHSFALSLSGVVYG 221

Query: 560 WGKNANGQLGLGDSQERE---TPTFVEALRDRQVESVVCGSSITAAICLHKSI-SVGDQS 615
           WG+N   QLGL  ++ +E    P  + ALR   V  V CG+  TA +  + S+ + GD S
Sbjct: 222 WGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDS 281

Query: 616 S 616
           +
Sbjct: 282 A 282



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 110/216 (50%), Gaps = 16/216 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++     V ++S G +H+  V  +G V+ WG G  G+LG     D   PK +  LS
Sbjct: 84  PELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALS 143

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V  V+CG   + ALT  G I++WG N HG   +G+  S S   P+++   LDG+ ++
Sbjct: 144 KYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDIS-SQASPQQV-SALDGIPLA 201

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL---QNVSQPKEVESLRGLKVKSVACG 429
           +VA G  H+  +S SG ++ +G      LG       + + +P  + +LR L V  V+CG
Sbjct: 202 QVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCG 261

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
             HTA +              G ++T+GD   G+LG
Sbjct: 262 AEHTAVLTQ-----------NGSVYTFGDDSAGQLG 286



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 25/221 (11%)

Query: 221 VMIWGEGVLG----GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           V  WG G  G    G++G              D L+PK + +     V  ++ G  H+  
Sbjct: 114 VYSWGAGTFGQLGTGELG--------------DRLIPKTINALSKYKVIQVACGHDHSIA 159

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVS---CPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           +T +G +F WG+   G+LG  +  D+S    P+ V  L GI +  V+ G   + AL+ SG
Sbjct: 160 LTNDGRIFSWGQNIHGQLG--LGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSG 217

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +Y WG NN     + + + +           L  + V+ V+CG  HTA+++ +G ++T+
Sbjct: 218 VVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTF 277

Query: 394 GDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHT 433
           GD + G LG  +  +    P++VE + G  V  +ACG +HT
Sbjct: 278 GDDSAGQLGRNSSSSPKFGPQKVEWIDG-PVSLLACGSYHT 317



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +  WG+ +  G +G   D S   +  QV AL          + +  ++ G  H+  ++  
Sbjct: 166 IFSWGQNI-HGQLGLGKDISSQASPQQVSAL--------DGIPLAQVAAGGAHSFALSLS 216

Query: 281 GEVFCWGEGKDGRLG---HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           G V+ WG     +LG    K    +  P  +  L  ++V  VSCG   T  LT++G +YT
Sbjct: 217 GVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYT 276

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI-VSTSGQLFTYGDG 396
           +G ++ G   +G   S S     +  + +DG  VS +ACG +HT + +STSGQL ++G G
Sbjct: 277 FGDDSAGQ--LGRNSSSSPKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQLLSFGRG 333

Query: 397 TF 398
             
Sbjct: 334 PL 335


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G +H A+VT  G+++ +G    G+LG      V  P  V+ L     +   CG   
Sbjct: 56  HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNH 115

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T++G +Y  G N  G   +G+   R+ +     F   +  ++ ++A G + +A V+
Sbjct: 116 TLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFF--TNQHKIKQLAAGSYTSAAVT 173

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             GQLF +GD + G +G  +   VS P +V+   G  + S++CG +H+A I         
Sbjct: 174 EDGQLFVWGDNSEGQIGLADKTYVSVPCQVDV--GKPISSISCGYYHSAFITG------- 224

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G+L+T+G+ + G+LG +  + K   +P  V  +++    + +CG   TV LT  G
Sbjct: 225 ----DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG 279

Query: 504 KVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VYT G   +GQLG+     + S+      L++  ++ I+ G  H AV+   G ++T+G 
Sbjct: 280 -VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTFGD 338

Query: 563 NANGQLGLGD 572
             +G+LGLG+
Sbjct: 339 GRHGKLGLGE 348



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 47/275 (17%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTA+V+ +G+L+ +G   +G LG G+   V +P  V++L+  K K   CG  HT
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116

Query: 434 AA------------------------------IVDIMVDRCKSNAIG------------G 451
                                           ++    ++ K   +             G
Sbjct: 117 LVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDG 176

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  D     +P  V   V       SCG   +  +TG G++YT G  
Sbjct: 177 QLFVWGDNSEGQIGLADKTYVSVPCQVD--VGKPISSISCGYYHSAFITGDGELYTFGEP 234

Query: 512 VHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +G+LG    + ++  V +  L   E V  ++ G  H  VLT  G VYT+G    GQLG 
Sbjct: 235 ENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGH 293

Query: 571 GDSQERET-PTFVEALRDRQVESVVCGSSITAAIC 604
           G    + + P  V+ LR  ++ ++ CG S TA I 
Sbjct: 294 GTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIA 328



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 20/216 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           + +WG+    G IG A D +      QVD   P          + +IS G  H+A +T +
Sbjct: 178 LFVWGDNS-EGQIGLA-DKTYVSVPCQVDVGKP----------ISSISCGYYHSAFITGD 225

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--NVQSVSCGEFQTCALTKSGEIYTW 338
           GE++ +GE ++G+LG  +   +   ++ + + GI   V  V+CG   T  LT++G +YT+
Sbjct: 226 GELYTFGEPENGKLGL-LPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTF 283

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G   +G    G    ++  +P+ +   L   ++  + CGE HTA+++ +G +FT+GDG  
Sbjct: 284 GLGQYGQLGHGTLLFKTS-VPKSV-KHLRKCKIRNITCGESHTAVIAENGLMFTFGDGRH 341

Query: 399 GVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
           G LG G  N  N   P    +     V  VACG  H
Sbjct: 342 GKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 377



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 11/146 (7%)

Query: 250 ALLPKLLESA--------VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNM 300
            LLP+ L+++        +M  V  ++ G +H  ++T+ G V+ +G G+ G+LGH  +  
Sbjct: 240 GLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 298

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
             S PK V+ L    +++++CGE  T  + ++G ++T+G   HG   +GE    + + P 
Sbjct: 299 KTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDP- 357

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVST 386
            L        V  VACG  H  + +T
Sbjct: 358 ALCSNFLSFTVLLVACGGCHMLVFAT 383



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           V  SCG   T  +TG GK+Y  GS   GQLG   K      T V+  LK E  K    G 
Sbjct: 55  VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKA-LKPEKTKLAVCGR 113

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAIC 604
            H  V T  G++Y  G N  GQLGLGD++ER T   +    ++ +++ +  GS  +AA+ 
Sbjct: 114 NHTLVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 173

Query: 605 LHKSISV-GDQS 615
               + V GD S
Sbjct: 174 EDGQLFVWGDNS 185


>gi|148222256|ref|NP_001090238.1| NIMA-related kinase 8 [Xenopus laevis]
 gi|50417684|gb|AAH77830.1| Nek8 protein [Xenopus laevis]
          Length = 658

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 41/338 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G            +S P  +  L+   VQ VS G  Q   +TKSG +  W    
Sbjct: 282 VYTWGSG------------ISNPLRLPMLNTEVVQ-VSAGRTQKAGVTKSGRLIMWEATP 328

Query: 343 HGADLVGERRSRSHWLPR---KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            G        S  H  P+   +  +   GV +  V+CG+  TA ++  G + T+G G+ G
Sbjct: 329 VGTGASSLPGSIDHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 388

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGH N  +V+QPK VE+L G ++  V+CG  H  A+         SN    ++F+WG  
Sbjct: 389 CLGHDNFNDVTQPKIVEALLGYEIVHVSCGASHAIAV---------SNE--KEVFSWGRG 437

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-- 517
           D GRLG    +    P  V    +++  +  CG   ++ LT   ++   GS    +LG  
Sbjct: 438 DNGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCGIDSSMILTVANQLLACGSNRFNKLGLD 497

Query: 518 ------NPKAKDR-----SITVVE-GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
                  P ++++     + T ++   L +E +     G+ H AV+T+ G  YT+G N +
Sbjct: 498 HILSASEPYSEEQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFGSNQH 557

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG    +    P  V AL+   V    CG + T A+
Sbjct: 558 GQLGTSVHRNSRVPCLVTALQGLTVTMAACGDAYTVAV 595



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 10/300 (3%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W E    G    ++ GS+   + Q    + + LE    + ++++S G    A +T  
Sbjct: 321 LIMW-EATPVGTGASSLPGSIDHAQPQ---FISRFLEGQSGVTIKHVSCGDLFTACLTDR 376

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DV+ PK+VE L G  +  VSCG     A++   E+++WG 
Sbjct: 377 GIIMTFGSGSNGCLGHDNFNDVTQPKIVEALLGYEIVHVSCGASHAIAVSNEKEVFSWGR 436

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            ++G   +G     SH  P+++ +        K+ CG   + I++ + QL   G   F  
Sbjct: 437 GDNGR--LGLGSQDSHNSPQQV-NIPQEYEAQKIVCGIDSSMILTVANQLLACGSNRFNK 493

Query: 401 LGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWG 457
           LG  ++ + S+P   E +        +   P +  AI+   V    S  +   G+ +T+G
Sbjct: 494 LGLDHILSASEPYSEEQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFG 553

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG        +P  VT L       A+CG   TV +   G+V+T G    G+LG
Sbjct: 554 SNQHGQLGTSVHRNSRVPCLVTALQGLTVTMAACGDAYTVAVGAEGQVFTWGKGARGRLG 613



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 139/332 (41%), Gaps = 38/332 (11%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKD---GRLGHKVNMDVSCPKLVECLSGI 314
           +V  +S G    A VTK G +  W     G G     G + H     +S  + +E  SG+
Sbjct: 301 EVVQVSAGRTQKAGVTKSGRLIMWEATPVGTGASSLPGSIDHAQPQFIS--RFLEGQSGV 358

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            ++ VSCG+  T  LT  G I T+G  ++G   +G         P K+ + L G  +  V
Sbjct: 359 TIKHVSCGDLFTACLTDRGIIMTFGSGSNGC--LGHDNFNDVTQP-KIVEALLGYEIVHV 415

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           +CG  H   VS   ++F++G G  G LG G+  + + P++V   +  + + + CG     
Sbjct: 416 SCGASHAIAVSNEKEVFSWGRGDNGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCG----- 470

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--------------HVDGERKLLPTCVTR 480
                 +D      +  +L   G     +LG               V+      P     
Sbjct: 471 ------IDSSMILTVANQLLACGSNRFNKLGLDHILSASEPYSEEQVEEAYTFTPIQSAP 524

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           L     + A  G   +  +T LG+ YT GS  HGQLG    ++  +  +   L+   V  
Sbjct: 525 LNQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSVHRNSRVPCLVTALQGLTVTM 584

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            + G  +   + + G V+TWGK A G+LG  D
Sbjct: 585 AACGDAYTVAVGAEGQVFTWGKGARGRLGRRD 616



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 23/165 (13%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK-------- 504
           ++TWG      L         LP     +++ + VQ S GR    G+T  G+        
Sbjct: 282 VYTWGSGISNPL--------RLP-----MLNTEVVQVSAGRTQKAGVTKSGRLIMWEATP 328

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V T  S++ G + + + +  S   +EG+     +K +S G    A LT  G + T+G  +
Sbjct: 329 VGTGASSLPGSIDHAQPQFIS-RFLEGQ-SGVTIKHVSCGDLFTACLTDRGIIMTFGSGS 386

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           NG LG  +  +   P  VEAL   ++  V CG+S   A+   K +
Sbjct: 387 NGCLGHDNFNDVTQPKIVEALLGYEIVHVSCGASHAIAVSNEKEV 431


>gi|432889799|ref|XP_004075367.1| PREDICTED: serine/threonine-protein kinase Nek8-like [Oryzias
           latipes]
          Length = 695

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 30/305 (9%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW---LPRKLFDTLDGVRVS 372
           V  VS G  Q   +TKSG + TW   + GA  +G      H       +  +   GV + 
Sbjct: 340 VLQVSLGRTQKMGVTKSGRLITWEAPSVGAGELGPPGVVEHMQLLFISRFLEGQSGVTIK 399

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            V+CG+  T  ++  G + T+G G+ G LGHGN  +V+QPK VE+L G ++  VACG  H
Sbjct: 400 SVSCGDLFTTCMTERGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVACGASH 459

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
             A+ +   +R        ++F WG  D GRLG    +    P  V   V F+  +A CG
Sbjct: 460 VVAVTN---ER--------EVFAWGRGDNGRLGLGTQDTHNSPQQVCLPVGFEAQRAVCG 508

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLG-------------NPKAKDRSITVVEG-KLKEEFV 538
              ++ ++    +   GS    +LG             N   +  S T V+   L  + +
Sbjct: 509 VDCSMIISSQSSIMACGSNRFNKLGLDRITAGEEPSQVNQVEEAHSFTPVQSVPLNTDKI 568

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             +  G+ H A +T GG  +T+G N +GQ+G    +    P  V  L+D  +  V CG +
Sbjct: 569 VSVDIGTSHSAAVTEGGQCFTFGSNQHGQMGCSSRRSGRVPYLVLGLQD--ITMVACGDA 626

Query: 599 ITAAI 603
            T AI
Sbjct: 627 FTLAI 631



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 16/317 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDV-SCPKLVECLSGINV 316
           +V  +SLG      VTK G +  W     G G+ G  G   +M +    + +E  SG+ +
Sbjct: 339 EVLQVSLGRTQKMGVTKSGRLITWEAPSVGAGELGPPGVVEHMQLLFISRFLEGQSGVTI 398

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           +SVSCG+  T  +T+ G I T+G  ++G   +G         P K+ + L G  + +VAC
Sbjct: 399 KSVSCGDLFTTCMTERGIIMTFGSGSNGC--LGHGNFNDVTQP-KIVEALLGYELVQVAC 455

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG-PWHTAA 435
           G  H   V+   ++F +G G  G LG G     + P++V    G + +   CG       
Sbjct: 456 GASHVVAVTNEREVFAWGRGDNGRLGLGTQDTHNSPQQVCLPVGFEAQRAVCGVDCSMII 515

Query: 436 IVDIMVDRCKSN---AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                +  C SN    +G    T G+ +  ++  V+      P     L     V    G
Sbjct: 516 SSQSSIMACGSNRFNKLGLDRITAGE-EPSQVNQVEEAHSFTPVQSVPLNTDKIVSVDIG 574

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              +  +T  G+ +T GS  HGQ+G    +   +  +   L++  +  ++ G      + 
Sbjct: 575 TSHSAAVTEGGQCFTFGSNQHGQMGCSSRRSGRVPYLVLGLQD--ITMVACGDAFTLAIG 632

Query: 553 SGGSVYTWGKNANGQLG 569
           + G VYTWGK A G+LG
Sbjct: 633 AEGEVYTWGKGARGRLG 649



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 14/273 (5%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            + + LE    + ++++S G      +T+ G +  +G G +G LGH    DV+ PK+VE 
Sbjct: 385 FISRFLEGQSGVTIKSVSCGDLFTTCMTERGIIMTFGSGSNGCLGHGNFNDVTQPKIVEA 444

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G  +  V+CG     A+T   E++ WG  ++G   +G     +H  P+++   + G  
Sbjct: 445 LLGYELVQVACGASHVVAVTNEREVFAWGRGDNGR--LGLGTQDTHNSPQQVCLPV-GFE 501

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV----ESLRGLKVKSV 426
             +  CG   + I+S+   +   G   F  LG   +    +P +V    E+     V+SV
Sbjct: 502 AQRAVCGVDCSMIISSQSSIMACGSNRFNKLGLDRITAGEEPSQVNQVEEAHSFTPVQSV 561

Query: 427 ACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
              P +T  IV + +    S A+  GG+ FT+G    G++G        +P  V  L D 
Sbjct: 562 ---PLNTDKIVSVDIGTSHSAAVTEGGQCFTFGSNQHGQMGCSSRRSGRVPYLVLGLQDI 618

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
             V  +CG   T+ +   G+VYT G    G+LG
Sbjct: 619 TMV--ACGDAFTLAIGAEGEVYTWGKGARGRLG 649



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 24/228 (10%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV 308
           D   PK++E+ +  ++  ++ GA H   VT E EVF WG G +GRLG       + P+ V
Sbjct: 435 DVTQPKIVEALLGYELVQVACGASHVVAVTNEREVFAWGRGDNGRLGLGTQDTHNSPQQV 494

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH---GADLV--GERRSR------SHW 357
               G   Q   CG   +  ++    I   G N     G D +  GE  S+      +H 
Sbjct: 495 CLPVGFEAQRAVCGVDCSMIISSQSSIMACGSNRFNKLGLDRITAGEEPSQVNQVEEAHS 554

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
                   L+  ++  V  G  H+A V+  GQ FT+G    G +G  + ++   P  V  
Sbjct: 555 FTPVQSVPLNTDKIVSVDIGTSHSAAVTEGGQCFTFGSNQHGQMGCSSRRSGRVPYLVLG 614

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           L+   +  VACG   T AI              G+++TWG   +GRLG
Sbjct: 615 LQ--DITMVACGDAFTLAI-----------GAEGEVYTWGKGARGRLG 649



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%)

Query: 430 PWHTAAIVDIMVDRCKSNAI--GGKLFTW-----GDADKGRLGHVDGERKLLPTCVTRLV 482
           P     ++ + + R +   +   G+L TW     G  + G  G V+  + L    ++R +
Sbjct: 334 PMPNTEVLQVSLGRTQKMGVTKSGRLITWEAPSVGAGELGPPGVVEHMQLLF---ISRFL 390

Query: 483 D----FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEF 537
           +          SCG + T  +T  G + T GS  +G LG+    D +   +VE  L  E 
Sbjct: 391 EGQSGVTIKSVSCGDLFTTCMTERGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYEL 450

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           V+ ++ G+ HV  +T+   V+ WG+  NG+LGLG      +P  V      + +  VCG
Sbjct: 451 VQ-VACGASHVVAVTNEREVFAWGRGDNGRLGLGTQDTHNSPQQVCLPVGFEAQRAVCG 508



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 20/169 (11%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYT--MGSAVHGQLGNPKAKDRSITVVEGKLKE----EFV 538
           + +Q S GR   +G+T  G++ T    S   G+LG P   +    +   +  E      +
Sbjct: 339 EVLQVSLGRTQKMGVTKSGRLITWEAPSVGAGELGPPGVVEHMQLLFISRFLEGQSGVTI 398

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
           K +S G      +T  G + T+G  +NG LG G+  +   P  VEAL   ++  V CG+S
Sbjct: 399 KSVSCGDLFTTCMTERGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVACGAS 458

Query: 599 ITAAICLHKSI-----------SVGDQ---SSCSQCRMPFGFRRKKHNC 633
              A+   + +            +G Q   +S  Q  +P GF  ++  C
Sbjct: 459 HVVAVTNEREVFAWGRGDNGRLGLGTQDTHNSPQQVCLPVGFEAQRAVC 507


>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 2063

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 127/270 (47%), Gaps = 32/270 (11%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + +  ++ G  H A ++ +G +F WG G+ GRLGH    D + P+LV  L   N+  V+ 
Sbjct: 9   IKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVAL 68

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR--KLFDTLDGV---RVSKVAC 376
           GE  T A +++GE+Y+WG  N G    GE +     +    KL + L  V   +V+ VAC
Sbjct: 69  GERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVAC 128

Query: 377 GEWHTAIVSTSGQLFTYGDGT---------FGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G +HT   +     + +GDG          FG            P+ + +L G  V+ +A
Sbjct: 129 GAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWT------PQSIGALAGRGVQQIA 182

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H A ++D            G L+TWG+   GRLGH D E    P  V  L     V
Sbjct: 183 CGWAHCAVLMDT-----------GDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIV 231

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           Q +CG      L+  G+V+  G+   G+LG
Sbjct: 232 QIACGFAHMAALSDKGEVFVCGTGC-GRLG 260



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 17/265 (6%)

Query: 247 QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD----- 301
           + D   P+L+   +  ++  ++LG +H A  ++ GE++ WG+   G LGH    +     
Sbjct: 46  ETDQNAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQI 105

Query: 302 VSCPKLVECLSGI---NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS-HW 357
            + PKL+E LS +    V  V+CG + T   T     Y WG   HG    G    R+  W
Sbjct: 106 QTTPKLIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEW 165

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P+ +   L G  V ++ACG  H A++  +G L+T+G+G  G LGHG+ ++  +P +V S
Sbjct: 166 TPQSI-GALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVAS 224

Query: 418 LRGLKVKSVACGPWHTAAIVD---IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           LRG ++  +ACG  H AA+ D   + V  C +    G+L   G+  K    H +   + +
Sbjct: 225 LRGTRIVQIACGFAHMAALSDKGEVFV--CGTGC--GRLGLDGEQGKSNPEHTEVANQKI 280

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGL 499
           P  V  L     +Q +CG + T+ L
Sbjct: 281 PRRVEPLRGLQILQVACGMISTIVL 305



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 22/250 (8%)

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
           +L  +++S+VACG  HTA +S  G LFT+G G +G LGHG+  + + P+ V  L    + 
Sbjct: 5   SLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIV 64

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH---VDGERKLLPT----- 476
            VA G  HTAA  +            G+L++WGDA+ G LGH    +G+ ++  T     
Sbjct: 65  GVALGERHTAAFSET-----------GELYSWGDANFGVLGHGELQEGDPQIQTTPKLIE 113

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE---GKL 533
            ++R++       +CG   T+  T     Y  G   HG LG      R+I       G L
Sbjct: 114 YLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGAL 173

Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
               V+ I+ G  H AVL   G +YTWG+ A G+LG GD ++ + P  V +LR  ++  +
Sbjct: 174 AGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQI 233

Query: 594 VCGSSITAAI 603
            CG +  AA+
Sbjct: 234 ACGFAHMAAL 243



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 148/345 (42%), Gaps = 43/345 (12%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           V  L  I +  V+CG   T A++  G ++TWG   +G   +G         PR L   L 
Sbjct: 3   VASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGR--LGHGDETDQNAPR-LVGELL 59

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-----VSQPKEVESLRGL- 421
              +  VA GE HTA  S +G+L+++GD  FGVLGHG LQ       + PK +E L  + 
Sbjct: 60  NTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVL 119

Query: 422 --KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL-FTWGDADKGRLGHV-DGERKL--LP 475
             KV  VACG +HT          C +     KL + WGD   G LG   D  R +   P
Sbjct: 120 RKKVTHVACGAYHTL---------CTT---ADKLTYIWGDGGHGVLGQGGDFGRTIEWTP 167

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
             +  L      Q +CG      L   G +YT G    G+LG+   +D         L+ 
Sbjct: 168 QSIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRG 227

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF-----------VEA 584
             +  I+ G  H+A L+  G V+  G    G+LGL   Q +  P             VE 
Sbjct: 228 TRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRVEP 286

Query: 585 LRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRK 629
           LR  Q+  V CG  + + I L  +    +Q S S  R  +   R+
Sbjct: 287 LRGLQILQVACG--MISTIVLQNTQD--EQQSLSTLRGNYNIWRE 327



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 32/253 (12%)

Query: 224 WGE---GVLGGDIGGAVDGSVSQNKTQVDALLPKLLE---SAVMLDVQNISLGAKHAALV 277
           WG+   GVLG        G + +   Q+    PKL+E     +   V +++ GA H    
Sbjct: 85  WGDANFGVLG-------HGELQEGDPQIQTT-PKLIEYLSRVLRKKVTHVACGAYHTLCT 136

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSC---PKLVECLSGINVQSVSCGEFQTCALTKSGE 334
           T +   + WG+G  G LG   +   +    P+ +  L+G  VQ ++CG      L  +G+
Sbjct: 137 TADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGVQQIACGWAHCAVLMDTGD 196

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +YTWG    G   +G      H  P ++  +L G R+ ++ACG  H A +S  G++F  G
Sbjct: 197 LYTWGEGAGGR--LGHGDEEDHKEPHQV-ASLRGTRIVQIACGFAHMAALSDKGEVFVCG 253

Query: 395 DGTFGVLG-----------HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            G  G LG           H  + N   P+ VE LRGL++  VACG   T  + +   ++
Sbjct: 254 TGC-GRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMISTIVLQNTQDEQ 312

Query: 444 CKSNAIGGKLFTW 456
              + + G    W
Sbjct: 313 QSLSTLRGNYNIW 325



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 89/194 (45%), Gaps = 22/194 (11%)

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
           +V SLR +K+  VACG  HTAAI           +  G LFTWG    GRLGH D   + 
Sbjct: 2   QVASLRRIKISRVACGWSHTAAI-----------SAKGLLFTWGMGRYGRLGHGDETDQN 50

Query: 474 LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGK 532
            P  V  L++ + V  + G   T   +  G++Y+ G A  G LG+ + ++    +    K
Sbjct: 51  APRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPK 110

Query: 533 LKEEF-------VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE---TPTFV 582
           L E         V  ++ G+YH    T+    Y WG   +G LG G    R    TP  +
Sbjct: 111 LIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSI 170

Query: 583 EALRDRQVESVVCG 596
            AL  R V+ + CG
Sbjct: 171 GALAGRGVQQIACG 184


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 32/323 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  +NV  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G  + + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L   GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVISFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEAL 585
                 G  D+ +   PT  EAL
Sbjct: 315 ------GPSDTSK---PTHPEAL 328



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 141/271 (52%), Gaps = 28/271 (10%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L+V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  + +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSIGALKNLGVIYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA ++             GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDEHTAVLIQ-----------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HG 514
            Q  CG   T     L  V+T G  +   HG
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVISFGHG 315



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 29/261 (11%)

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  + + A GE H+ ++ T+ ++ + GD + G LG         P+ +++L  L V  V+
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDF 484
           CG  H+ A+       C      G++F WG   +G+LG   GE K     P  +T L   
Sbjct: 82  CGKEHSLAV-------CHK----GRVFAWGAGSEGQLG--IGEFKEISFTPKKITTLNGI 128

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVK 539
             +Q SCG   ++ L+   +V++ G   HGQLG  K     A  + +  +EG      + 
Sbjct: 129 KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIP----LA 184

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCG 596
            +++G  H   L+  G+ + WG N+ GQL L       +   P  + AL++  V  + CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244

Query: 597 SSITAAICLH-KSISVGDQSS 616
              TA +    K  + GD SS
Sbjct: 245 DEHTAVLIQDGKVFTFGDNSS 265



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA++   G++FT+GD + G LG+        P
Sbjct: 220 VPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303


>gi|320163592|gb|EFW40491.1| hypothetical protein CAOG_01016 [Capsaspora owczarzaki ATCC 30864]
          Length = 2245

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 181/433 (41%), Gaps = 114/433 (26%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE---------CLSGI 314
           V+++++G +H+A VT +G +F  G  K G+LG    +  + P LV            + +
Sbjct: 51  VKSVAVGGEHSAFVTLDGTLFTMGSNKHGQLGLGDTLTRTEPTLVRFDDEQDAAAAGAPV 110

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHG------ADLVGERRSRSHWLPRKLF----- 363
            + +V+CG   T AL+ SG +Y WG    G      AD+      R    PR++      
Sbjct: 111 VIVAVACGRDHTVALSSSGRVYAWGDAQDGQLGLPAADVASNGSRRMQLRPRRVRFHACS 170

Query: 364 --------DTLDG---------------------------------VRVSKVACGEWHTA 382
                   D   G                                 V ++++ACG  HT 
Sbjct: 171 ADNSLNAQDPFAGSAGGDPSFLDSEHDQQQMDERNRPIGQVGAEMDVVITRIACGNSHTV 230

Query: 383 IVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            VS  G+ F++G G+   LGHG   +     P+++E   G++V ++ACG  HT AI    
Sbjct: 231 AVSDDGRCFSWGTGS--QLGHGADAIARCDTPRQIEKFVGIQVVAIACGHRHTLAI---- 284

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRMLTVGL 499
                     GK                      P    R+ ++ FV + S  R +   +
Sbjct: 285 ----------GK----------------------PQGPLRIANYSFVDEQSTPRAMYHRV 312

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           T   +VY+ G    GQLG+ +  D ++      L+   +  +++G  H   L++ G VY 
Sbjct: 313 T---EVYSWGEGEAGQLGHSQTTDLAVPTRIESLQNCGILRLAAGGAHSIALSNTGEVYA 369

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           WG  ++GQLGL D++    P  V ALR + + S+  GS  T        +  G+++S ++
Sbjct: 370 WGNGSHGQLGLPDNKSVSFPMPVLALRGKNIFSIAAGSVHT--------LVAGERTSSNE 421

Query: 620 CRMPF-GFRRKKH 631
             + F G +R  H
Sbjct: 422 WELHFCGPQRSPH 434



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 29/140 (20%)

Query: 218 LKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           + +V  WGEG   G +G         +    D  +P  +ES     +  ++ G  H+  +
Sbjct: 312 VTEVYSWGEGE-AGQLG---------HSQTTDLAVPTRIESLQNCGILRLAAGGAHSIAL 361

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           +  GEV+ WG G  G+LG   N  VS P  V  L G N+ S++ G   T           
Sbjct: 362 SNTGEVYAWGNGSHGQLGLPDNKSVSFPMPVLALRGKNIFSIAAGSVHTL---------- 411

Query: 338 WGHNNHGADLVGERRSRSHW 357
                    + GER S + W
Sbjct: 412 ---------VAGERTSSNEW 422


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 187/405 (46%), Gaps = 49/405 (12%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V +WG G  G  +G      +S++ +Q + +L + LES    +  ++S G  H  ++T +
Sbjct: 30  VALWGNGDQG-RLG------LSESGSQFEPVLCRALESH---EPCSVSCGGAHTLILTDK 79

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G VF  G    G+LG  +  + S  P  V       V  ++ G + + A+T SGE Y WG
Sbjct: 80  GRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWG 138

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G   +G+R    +  P+K+ ++L G+R+  +A G  H+  ++ +GQ+ ++G   FG
Sbjct: 139 RNSEGQLGLGKRAKSVYITPQKM-ESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197

Query: 400 VLGHGNLQ---------NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
            LGHG +          N   P+ +  L  L+V+SV+ G  H+A   D            
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADD-----------S 246

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G ++++G     +LG  +      P  +  L     +  SCG   T  +T  G +YT GS
Sbjct: 247 GTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGS 304

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG--------- 561
             HG LG+          +E  L E F+  IS G  H A + S G +++WG         
Sbjct: 305 NEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSYGTYA 362

Query: 562 ---KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              +++ GQLG+G   +   P  +E         V CG + TAAI
Sbjct: 363 TQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 28/234 (11%)

Query: 221 VMIWGE---GVLG-GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           V+ WG    G LG G++ G  D     N+       P+++     L V+++S G  H+A 
Sbjct: 188 VLSWGTNRFGCLGHGEMTGFFDFFKDTNE-----YTPRIIHCLEKLQVRSVSAGLVHSAC 242

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
               G ++ +G+G   +LG   N D S P  +  L    V S+SCG + T A+T+ G+IY
Sbjct: 243 ADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIY 300

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG-D 395
           TWG N HG    G R S     P +L ++L    +S+++CG  HTA +S  G +F++G  
Sbjct: 301 TWGSNEHGCLGSGFRASSK---PLRL-ESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355

Query: 396 GTFGV-----------LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           G++G            LG G   +  +P  +E    L    V+CG  HTAAI++
Sbjct: 356 GSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 37/271 (13%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECL 311
           P  +++    D+ ++S G +H+  + KEG VF WG G DG+LG +    + S PK ++ L
Sbjct: 80  PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL 139

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER---RSRSHWLPRKLFDTLDG 368
           S   +  VSCG + + AL + G +++WG NNHG   +GE    ++   W+      +LDG
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWV-----KSLDG 194

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG----NLQNVSQPKEVESLRGLKVK 424
           + +++VA G  H+  +S SG  + +G    G L       + + +S+P  +  L+ L+V 
Sbjct: 195 IPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVT 254

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVT 479
            ++CG  HTA +              GK+FT+G  D G+LG     R+L+     P  V 
Sbjct: 255 YISCGDEHTAVLTQ-----------DGKVFTFGSNDSGQLG-----RQLISGMKGPQVVD 298

Query: 480 RLVDFDFVQASCGRMLTVGLT-GLGKVYTMG 509
             V F   Q +CG   T+  +   G+V + G
Sbjct: 299 SAVSFS--QIACGSYHTLAYSCTTGQVISFG 327



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 168/364 (46%), Gaps = 44/364 (12%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+  +G V+  G    G+LG K       P  ++ L   ++ SVSCG+  + A+
Sbjct: 45  GERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAI 104

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            K G +++WG  + G   + E +  S  +P+K+ D L   ++ +V+CG +H+  ++  G+
Sbjct: 105 CKEGRVFSWGSGSDGQLGIREFKKLSS-IPKKI-DELSSFKIIQVSCGHYHSIALAQDGR 162

Query: 390 LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G    G LG G N+ + + P+ V+SL G+ +  VA G  H+ A+           +
Sbjct: 163 VFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL-----------S 211

Query: 449 IGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
             G  + WG  + G+L         E+   P  +  L        SCG   T  LT  GK
Sbjct: 212 FSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGK 271

Query: 505 VYTMGSAVHGQLG--------NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGG 555
           V+T GS   GQLG         P+  D +++  +          I+ GSYH +A   + G
Sbjct: 272 VFTFGSNDSGQLGRQLISGMKGPQVVDSAVSFSQ----------IACGSYHTLAYSCTTG 321

Query: 556 SVYTWG----KNANGQLGLGDS-QERETPTFVEA--LRDRQVESVVCGSSITAAICLHKS 608
            V ++G    ++  G L  GD+ Q       + +    D QV+ +  G++      L  +
Sbjct: 322 QVISFGCGSQRDPIGPLQPGDAVQNFNISNLISSNDFTDFQVKDIFAGANANFVTTLQDT 381

Query: 609 ISVG 612
            S G
Sbjct: 382 SSSG 385



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 28/330 (8%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS-----VSCGEFQTCALTKSGEIYTW 338
           +CWG+   G+LG    +  +  + V C  G ++ +      +CGE  +  L   G +++ 
Sbjct: 3   YCWGDNSSGQLGIPA-VPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G+N+ G   +G +R + H  P ++   L+   +  V+CG+ H+  +   G++F++G G+ 
Sbjct: 62  GNNSCGQ--LGRKRCQKHGRPAQI-QALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSD 118

Query: 399 GVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           G LG    + +S  PK+++ L   K+  V+CG +H+ A+           A  G++F+WG
Sbjct: 119 GQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIAL-----------AQDGRVFSWG 167

Query: 458 DADKGRLGHVDG-ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL 516
             + G+LG  +    +  P  V  L      Q + G   +  L+  G  Y  G    GQL
Sbjct: 168 KNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQL 227

Query: 517 GNPKAKDRSITVVE----GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
                K+ +  + +    G+LK   V  IS G  H AVLT  G V+T+G N +GQLG   
Sbjct: 228 ALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQL 287

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAA 602
               + P  V++        + CGS  T A
Sbjct: 288 ISGMKGPQVVDSAVS--FSQIACGSYHTLA 315



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 4/204 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   DG +   + +  + +PK ++      +  +S G  H+  + ++G VF WG+   G+
Sbjct: 114 GSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQ 173

Query: 294 LGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG   N+   + P+ V+ L GI +  V+ G   + AL+ SG  Y WG NN G   +  ++
Sbjct: 174 LGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKK 233

Query: 353 SRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
             +  + +      L  ++V+ ++CG+ HTA+++  G++FT+G    G LG   +  +  
Sbjct: 234 ESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKG 293

Query: 412 PKEVESLRGLKVKSVACGPWHTAA 435
           P+ V+S   +    +ACG +HT A
Sbjct: 294 PQVVDS--AVSFSQIACGSYHTLA 315


>gi|162453643|ref|YP_001616010.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
 gi|161164225|emb|CAN95530.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
          Length = 1134

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 161/375 (42%), Gaps = 41/375 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WGEG  G  +G         N +  DA  P  + +  + D  ++  G  H   +   
Sbjct: 540 VVCWGEGQWG-RLG---------NGSTADATTPVTVSN--LTDAVDVDAGGGHTCALRAT 587

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V CWG G +G+LG+ ++ D S P  V  L+  +  S+S G   +CAL  +G    WG 
Sbjct: 588 GAVVCWGRGTNGQLGNGISGDQSAPVTVFGLN--DAISISAGWGHSCALRATGGAVCWGR 645

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW--------HTAIVSTSGQLFT 392
            NHG   +G   + S + P ++ +  D V +       +        HT  +  +G +  
Sbjct: 646 GNHG--QLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRC 703

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G G  G LG+G   +     +V  L     ++VA G  HT A+      RC        
Sbjct: 704 WGYGVDGQLGYGAFSSSEAGVDVLDLS--DARAVAAGMSHTCAMRSTGEIRC-------- 753

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
              WG AD G++G+      LLP  V  L   D V+ + G   T  L   G+V   G   
Sbjct: 754 ---WGAADSGQIGNGSAATALLPAPVVNL--GDAVEIAAGYAHTCALRRNGQVECWGEGE 808

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
            G+LGN    DR+       L +     I++G+ H   L   G V  WG+ A G+LG G 
Sbjct: 809 FGRLGNGSGADRTTPTPVLNLTD--AAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGS 866

Query: 573 SQERETPTFVEALRD 587
             +R TP  V  L D
Sbjct: 867 QDDRNTPVAVSGLTD 881



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 157/353 (44%), Gaps = 26/353 (7%)

Query: 235  GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
            GA D     N +   ALLP  + +  + D   I+ G  H   + + G+V CWGEG+ GRL
Sbjct: 755  GAADSGQIGNGSAATALLPAPVVN--LGDAVEIAAGYAHTCALRRNGQVECWGEGEFGRL 812

Query: 295  GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
            G+    D + P  V  L+  +   ++ G   TCAL +SG++  WG   +G    G +  R
Sbjct: 813  GNGSGADRTTPTPV--LNLTDAAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDR 870

Query: 355  SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
            +   P  +    D V +S    G+ HT  V  +GQ+  +G    G LG+G+  + + P  
Sbjct: 871  N--TPVAVSGLTDAVAISA---GDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQTAPVT 925

Query: 415  VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
            V  L      +VA G  HT A+              G +  WG    GRLG+      L 
Sbjct: 926  V--LDIADAVAVAAGGEHTCAL-----------RASGAVSCWGGGGSGRLGNASTANSLR 972

Query: 475  PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
            P  VT L D   + A  GR+ T  +   G V   GS + G+LGN      +I +    L 
Sbjct: 973  PVAVTGLSDAIGLAA--GRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATIPIPVSGLG 1030

Query: 535  EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            +     +S+G+ H   +T+ G  + WG   +G+LG G      TP  V  + D
Sbjct: 1031 DALQ--VSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATALTPVPVANVAD 1081



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 135/332 (40%), Gaps = 18/332 (5%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
           L  AV LD      G  H   +   G V CWGEG+ GRLG+    D + P  V  L+  +
Sbjct: 518 LSDAVALDA-----GESHTCALRATGAVVCWGEGQWGRLGNGSTADATTPVTVSNLT--D 570

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
              V  G   TCAL  +G +  WG   +G   +G   S     P  +F   D + +S   
Sbjct: 571 AVDVDAGGGHTCALRATGAVVCWGRGTNG--QLGNGISGDQSAPVTVFGLNDAISISA-- 626

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            G  H+  +  +G    +G G  G LG+G+  +V  P EV +L      ++    +    
Sbjct: 627 -GWGHSCALRATGGAVCWGRGNHGQLGNGSTSSVYTPVEVPNLS--DAVAIEASNFTNYG 683

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
            +D       +    G +  WG    G+LG+           V  L D   V A  G   
Sbjct: 684 NLDTTFGHTCALRRNGTVRCWGYGVDGQLGYGAFSSSEAGVDVLDLSDARAVAA--GMSH 741

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           T  +   G++   G+A  GQ+GN  A    +      L +     I++G  H   L   G
Sbjct: 742 TCAMRSTGEIRCWGAADSGQIGNGSAATALLPAPVVNLGDAVE--IAAGYAHTCALRRNG 799

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            V  WG+   G+LG G   +R TPT V  L D
Sbjct: 800 QVECWGEGEFGRLGNGSGADRTTPTPVLNLTD 831



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 135/334 (40%), Gaps = 31/334 (9%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           D   + +G  HA  +   G V CWG G +GRLG+      + P  V  LS  +  ++  G
Sbjct: 470 DAVAVGVGRFHACALRATGAVVCWGSGANGRLGNGSTAGRTTPTPVSGLS--DAVALDAG 527

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  TCAL  +G +  WG    G   +G   +     P  + +  D V V     G  HT 
Sbjct: 528 ESHTCALRATGAVVCWGEGQWG--RLGNGSTADATTPVTVSNLTDAVDVDA---GGGHTC 582

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            +  +G +  +G GT G LG+G   + S P  V  L      S++ G  H+ A+      
Sbjct: 583 ALRATGAVVCWGRGTNGQLGNGISGDQSAPVTVFGLN--DAISISAGWGHSCAL------ 634

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS----CGRMLTV- 497
                A GG +  WG  + G+LG+        P  V  L D   ++AS     G + T  
Sbjct: 635 ----RATGGAVC-WGRGNHGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTF 689

Query: 498 ----GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
                L   G V   G  V GQLG          V    L +   + +++G  H   + S
Sbjct: 690 GHTCALRRNGTVRCWGYGVDGQLGYGAFSSSEAGVDVLDLSD--ARAVAAGMSHTCAMRS 747

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            G +  WG   +GQ+G G +     P  V  L D
Sbjct: 748 TGEIRCWGAADSGQIGNGSAATALLPAPVVNLGD 781



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 129/334 (38%), Gaps = 37/334 (11%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G+V CWG  ++G LG    M       V  L+  +  +V  G F  CAL  +G +  WG 
Sbjct: 438 GKVDCWGNNENGELGDGTTMTTGRATPVSNLN--DAVAVGVGRFHACALRATGAVVCWGS 495

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
             +G   +G   +     P  +    D V +     GE HT  +  +G +  +G+G +G 
Sbjct: 496 GANG--RLGNGSTAGRTTPTPVSGLSDAVALDA---GESHTCALRATGAVVCWGEGQWGR 550

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG+G+  + + P  V +L       V  G  HT A+              G +  WG   
Sbjct: 551 LGNGSTADATTPVTVSNL--TDAVDVDAGGGHTCALRAT-----------GAVVCWGRGT 597

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG+     +  P  V  L D   + A  G    +  TG    +  G+  HGQLGN  
Sbjct: 598 NGQLGNGISGDQSAPVTVFGLNDAISISAGWGHSCALRATGGAVCWGRGN--HGQLGNGS 655

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSY-----------HVAVLTSGGSVYTWGKNANGQLG 569
                  V    L +     I + ++           H   L   G+V  WG   +GQLG
Sbjct: 656 TSSVYTPVEVPNLSDAVA--IEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLG 713

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G     E    V  L D    +V  G S T A+
Sbjct: 714 YGAFSSSEAGVDVLDLSD--ARAVAAGMSHTCAM 745



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 120/306 (39%), Gaps = 36/306 (11%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V  WGEG  G  +G         N +Q D   P  +    + D   IS G  H   V + 
Sbjct: 851  VRCWGEGAYG-RLG---------NGSQDDRNTPVAVSG--LTDAVAISAGDAHTCAVRQN 898

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            G+V CWG    GRLG+    D + P  V  L   +  +V+ G   TCAL  SG +  WG 
Sbjct: 899  GQVSCWGYAALGRLGNGSTTDQTAPVTV--LDIADAVAVAAGGEHTCALRASGAVSCWGG 956

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
               G        + +   P  +    D +    +A G  HT  V ++G +  +G G  G 
Sbjct: 957  GGSGRLG--NASTANSLRPVAVTGLSDAI---GLAAGRLHTCAVHSTGAVSCWGSGLDGR 1011

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
            LG+G   + + P  V  L       V+ G  HT AI           A GG  F WG   
Sbjct: 1012 LGNGATTSATIPIPVSGLG--DALQVSAGTSHTCAIT----------APGGA-FCWGLGT 1058

Query: 461  KGRLGHVDGERKLLPTCVTRLVDFDFVQA----SCGRMLTVGLTGLGKVYTMGSAVHGQL 516
             G LG       L P  V  + D   + A    S G   TV L   G V   G+   G+L
Sbjct: 1059 SGELGDGSMATALTPVPVANVADAVMISAGRRNSVGASHTVVLRRTGSVAAWGAVGVGRL 1118

Query: 517  GNPKAK 522
            GN   K
Sbjct: 1119 GNGSPK 1124



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 10/178 (5%)

Query: 244  NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
            N +  ++L P  +    + D   ++ G  H   V   G V CWG G DGRLG+      +
Sbjct: 964  NASTANSLRPVAVTG--LSDAIGLAAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSAT 1021

Query: 304  CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
             P  V  L   +   VS G   TCA+T  G  + WG    G   +G+    +   P  + 
Sbjct: 1022 IPIPVSGLG--DALQVSAGTSHTCAITAPGGAFCWGLGTSGE--LGDGSMATALTPVPVA 1077

Query: 364  DTLDGVRVS---KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
            +  D V +S   + + G  HT ++  +G +  +G    G LG+G+ + VS P  V  L
Sbjct: 1078 NVADAVMISAGRRNSVGASHTVVLRRTGSVAAWGAVGVGRLGNGSPK-VSFPIAVVGL 1134



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           +GGK+  WG+ + G LG          T V+ L   D V    GR     L   G V   
Sbjct: 436 VGGKVDCWGNNENGELGDGTTMTTGRATPVSNL--NDAVAVGVGRFHACALRATGAVVCW 493

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           GS  +G+LGN     R+       L +     + +G  H   L + G+V  WG+   G+L
Sbjct: 494 GSGANGRLGNGSTAGRTTPTPVSGLSDAVA--LDAGESHTCALRATGAVVCWGEGQWGRL 551

Query: 569 GLGDSQERETPTFVEALRD 587
           G G + +  TP  V  L D
Sbjct: 552 GNGSTADATTPVTVSNLTD 570


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 27/313 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I  G   A ++T  G V+ WG    G+LGH    D+S P ++       +  ++CG+  +
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHS 272

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL + G +Y WG+ + G   +G     S  +P K+    +  +++ +ACG+  +  +S 
Sbjct: 273 LALDEIGVVYAWGNGSGGRLGLGNSEVVS--IP-KIIPHFEDEKITSIACGQEFSLALSD 329

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           SG++F++G G  G LG+     +SQ  PK +  L       ++CG WH+  +        
Sbjct: 330 SGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLP--PASQISCGNWHSMVL-------- 379

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
              +  G ++T+G     RLGH        PT V   +     +   G      L+    
Sbjct: 380 ---SKSGDVYTFGSNIDCRLGHSGNGST--PTMVQ--IGSKIKKIGAGANFNAVLSESNA 432

Query: 505 VYTMGSAVHGQLGNPKAKDRSIT----VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +YT GS +H QLG      R+ T    VV+  L    +  I  G  HV VLT  G V+T+
Sbjct: 433 IYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPYP-ISTIEVGYEHVVVLTDTGEVFTF 491

Query: 561 GKNANGQLGLGDS 573
           G N+  Q G+G++
Sbjct: 492 GDNSMMQCGVGEA 504



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 29/321 (9%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
           T+ D  +P ++ +     +  I+ G  H+  + + G V+ WG G  GRLG   +  VS P
Sbjct: 244 TKNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIP 303

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG---HNNHGADLVGERRSRSHWLPRKL 362
           K++       + S++CG+  + AL+ SG++++WG   H N G D V    S+S     K+
Sbjct: 304 KIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLGYD-VSTMLSQS---TPKV 359

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L     S+++CG WH+ ++S SG ++T+G      LGH    N S P  V+   G K
Sbjct: 360 IPMLP--PASQISCGNWHSMVLSKSGDVYTFGSNIDCRLGHSG--NGSTPTMVQ--IGSK 413

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL---PTCVT 479
           +K +  G    A +        +SNAI    +TWG     +LG +  + +     P  V 
Sbjct: 414 IKKIGAGANFNAVL-------SESNAI----YTWGSNIHCQLGVLLPDHRNYTGEPQVVK 462

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE--F 537
            L+ +       G    V LT  G+V+T G     Q G  +A          K+ +    
Sbjct: 463 TLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVGEAIKEVCNFTRVKIPDNSTV 522

Query: 538 VKGISSGSYHVAVLTSGGSVY 558
            K  + G+  +  L+SG ++Y
Sbjct: 523 FKIAAGGNSSLISLSSGHNIY 543



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 174/413 (42%), Gaps = 65/413 (15%)

Query: 233 IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQ---NISLGAKHAALVTKEGE-----VF 284
           +G  VDGS+  N+          L+ AV LD +   N+    + + +    G      ++
Sbjct: 127 VGLQVDGSLVDNRNLTA------LDIAVWLDKKECINLLTSLRSSKMTVSNGTGGSVPIY 180

Query: 285 CWGEGKDGRLGHKVNMDVSCPKLVECLSGINV-----------QSVSCGEFQTCALTKSG 333
            WG+             + CP L    +G               ++  G+     LT +G
Sbjct: 181 QWGQ-------------MLCPSLSLIATGTPTGVLFNQKEHSPTTIKFGQNFAVMLTDTG 227

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +Y+WG  ++G   +G        +P  +       +++++ACG+ H+  +   G ++ +
Sbjct: 228 GVYSWGLCSYGK--LGHPTKNDISIP-SMISAFKNKQITQIACGKDHSLALDEIGVVYAW 284

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G+G+ G LG GN + VS PK +      K+ S+ACG   + A+ D            GK+
Sbjct: 285 GNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSD-----------SGKV 333

Query: 454 FTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           F+WG    G LG+ D    L    P  +  L      Q SCG   ++ L+  G VYT GS
Sbjct: 334 FSWGKGLHGNLGY-DVSTMLSQSTPKVIPMLPPAS--QISCGNWHSMVLSKSGDVYTFGS 390

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
            +  +LG+      + T+V+   K   +K I +G+   AVL+   ++YTWG N + QLG+
Sbjct: 391 NIDCRLGH-SGNGSTPTMVQIGSK---IKKIGAGANFNAVLSESNAIYTWGSNIHCQLGV 446

Query: 571 GDSQERET---PTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
                R     P  V+ L    + ++  G      +     +     +S  QC
Sbjct: 447 LLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQC 499



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 6/174 (3%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G +++WG    G+LGH       +P+ ++   +    Q +CG+  ++ L  +G VY  G+
Sbjct: 227 GGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGN 286

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
              G+LG   ++  SI  +    ++E +  I+ G      L+  G V++WGK  +G LG 
Sbjct: 287 GSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLGY 346

Query: 571 GDSQ--ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRM 622
             S    + TP  +  L       + CG+    ++ L KS  V    S   CR+
Sbjct: 347 DVSTMLSQSTPKVIPML--PPASQISCGN--WHSMVLSKSGDVYTFGSNIDCRL 396


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 174/368 (47%), Gaps = 33/368 (8%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+ S++ + V  ++P L    V      ++ G  H   V ++G V+ WG    G+LG  
Sbjct: 491 DGTSSRSPSPV--MVPGLTGVTVF---AALAAGDSHTVAVMQDGTVWAWGLNASGQLGDG 545

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             +D   P  +  L+G+   +++ G   T A  + G +++WG N++G   +G+  + +H 
Sbjct: 546 ATIDRRIPVQIPGLAGVT--AIAAGSAHTLAAGQDGAVWSWGANSYGQ--LGDGTT-THR 600

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           L       L GV  S +A G+ H+  +   G +  +G  ++G LG G       P +V  
Sbjct: 601 LSPVQVPGLTGV--SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHG 658

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L G  V +VA G  HT A+      R       G ++ WG  D G+LG     R+L P  
Sbjct: 659 LTG--VTAVAAGSLHTVAL------RQD-----GTVWAWGYNDLGQLGDGTTTRRLAPVQ 705

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-E 536
           V  L D   + A  G   TV +   G V+  G  + GQLG+  +  RS  V   +++E  
Sbjct: 706 VQGLTDVTAIAA--GYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV---QVQELT 760

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  +++G  H   +   G+V+ WG N+  QLG G S +R TP +VE L    V ++  G
Sbjct: 761 GVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGLTG--VSALTAG 818

Query: 597 SSITAAIC 604
              TAA+ 
Sbjct: 819 RFHTAAVS 826



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 176/390 (45%), Gaps = 42/390 (10%)

Query: 217 ILKDVMIWGEGV-LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           + +D  +W  G+ + G +G   DG+ ++  T V   +P L        V  I+ G +H  
Sbjct: 72  VRQDGTVWAWGLNVWGQLG---DGTHTERHTPVQ--VPGLTG------VTAIAAGRRHTF 120

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
            V+++G V+ WG+   G+LG     D   P  +  L+G+   +++ G   T A+ + G +
Sbjct: 121 AVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVT--AIAAGRRHTFAVRQDGTV 178

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           + WG N  G    G R +R   L       L GV  + +A G++HT  V   G ++ +G+
Sbjct: 179 WAWGDNAWGQLGDGTRTNR---LTPVQVPGLTGV--TAIAAGDYHTLAVRQDGTVWAWGN 233

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              G LG G       P +V  L G  V +++ G  HT A+      R       G ++ 
Sbjct: 234 NALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAV------RQD-----GTVWA 280

Query: 456 WGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           WGD   G+LG  DG R  +L P  V  L     +  + GR  T  +   G V+  G    
Sbjct: 281 WGDNVWGQLG--DGTRTDRLTPVQVPGLSGVTAI--AEGRRHTFAVRQDGTVWAWGLNFW 336

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG+    DR   V    L    V  I++G YH   +   G+V+ WG N  GQLG G  
Sbjct: 337 GQLGDGTRSDRLTPVQVPDLTS--VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTY 394

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAI 603
            +R TP  V  L    V ++  G S T A+
Sbjct: 395 TDRLTPVQVPGLTG--VTAIAAGESHTVAM 422



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 161/374 (43%), Gaps = 35/374 (9%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           +  V  I+ G  H   V ++G V+ WG    G+LG     +   P  V  L+G+   ++S
Sbjct: 206 LTGVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTGVT--AIS 263

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            GE  T A+ + G ++ WG N  G    G R  R   L       L GV  + +A G  H
Sbjct: 264 AGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDR---LTPVQVPGLSGV--TAIAEGRRH 318

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           T  V   G ++ +G   +G LG G   +   P +V  L    V ++A G +HT A+    
Sbjct: 319 TFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLT--SVTAIAAGDYHTLAV---- 372

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
             R       G ++ WGD   G+LG      +L P  V  L     + A  G   TV + 
Sbjct: 373 --RQD-----GTVWAWGDNVWGQLGDGTYTDRLTPVQVPGLTGVTAIAA--GESHTVAMR 423

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G V+  G  V GQLG+    DR   V    L    V  I++G YH   +   G+V  W
Sbjct: 424 QDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS--VTAIAAGDYHTLAVRQDGTVCAW 481

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQV-ESVVCGSSITAAIC---------LHKSIS 610
           G NA GQLG G S    +P  V  L    V  ++  G S T A+          L+ S  
Sbjct: 482 GFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQ 541

Query: 611 VGDQSSCSQCRMPF 624
           +GD ++  + R+P 
Sbjct: 542 LGDGATIDR-RIPV 554



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 144/327 (44%), Gaps = 28/327 (8%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           +  V   + G  H   V ++G  + WG    G+LG     D   P  V  L+G+   +V+
Sbjct: 6   LTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVT--AVA 63

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G   T A+ + G ++ WG N  G    G    R    P ++   L G  V+ +A G  H
Sbjct: 64  AGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERH--TPVQV-PGLTG--VTAIAAGRRH 118

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           T  VS  G ++ +GD  +G LG G   +   P ++  L G  V ++A G  HT A+    
Sbjct: 119 TFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTG--VTAIAAGRRHTFAV---- 172

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRMLTVG 498
             R       G ++ WGD   G+LG  DG R  +L P  V  L     + A  G   T+ 
Sbjct: 173 --RQD-----GTVWAWGDNAWGQLG--DGTRTNRLTPVQVPGLTGVTAIAA--GDYHTLA 221

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           +   G V+  G+   GQLG+    +R   V    L    V  IS+G  H   +   G+V+
Sbjct: 222 VRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVW 279

Query: 559 TWGKNANGQLGLGDSQERETPTFVEAL 585
            WG N  GQLG G   +R TP  V  L
Sbjct: 280 AWGDNVWGQLGDGTRTDRLTPVQVPGL 306



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 134/297 (45%), Gaps = 28/297 (9%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           V  L+G+   + + GE+ T A+ + G  + WG+N  G    G R  R   L       L 
Sbjct: 3   VPGLTGVT--ATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDR---LTPVQVPGLT 57

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           GV  + VA G  HT  V   G ++ +G   +G LG G       P +V  L G  V ++A
Sbjct: 58  GV--TAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTG--VTAIA 113

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
            G  HT A+           +  G ++ WGD D G+LG  DG R    T V +L +   V
Sbjct: 114 AGRRHTFAV-----------SQDGTVWAWGDNDWGQLG--DGTRADRHTPV-QLPELTGV 159

Query: 488 QA-SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
            A + GR  T  +   G V+  G    GQLG+    +R   V    L    V  I++G Y
Sbjct: 160 TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG--VTAIAAGDY 217

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   +   G+V+ WG NA GQLG G   ER TP  V  L    V ++  G S T A+
Sbjct: 218 HTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAV 272



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 38/368 (10%)

Query: 217 ILKDVMIWGEGV-LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAA 275
           +++D  +W  G+   G +G   DG+       +D  +P  +    +  V  I+ G+ H  
Sbjct: 525 VMQDGTVWAWGLNASGQLG---DGAT------IDRRIPVQIPG--LAGVTAIAAGSAHTL 573

Query: 276 LVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEI 335
              ++G V+ WG    G+LG         P  V  L+G++  +++ G+  + AL + G +
Sbjct: 574 AAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTGVS--AMAAGDAHSVALLQDGTV 631

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
             WG N+ G   +G+  + +   P ++   L GV  + VA G  HT  +   G ++ +G 
Sbjct: 632 SAWGRNSWGQ--LGDGTTAARLTPVQVHG-LTGV--TAVAAGSLHTVALRQDGTVWAWGY 686

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              G LG G       P +V+ L    V ++A G +HT A+      R       G ++ 
Sbjct: 687 NDLGQLGDGTTTRRLAPVQVQGLT--DVTAIAAGYFHTVAV------RQD-----GTVWA 733

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG    G+LG      +  P  V  L     + A  G   TV +   G V+  G+    Q
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQELTGVSALAA--GYAHTVAVKQDGTVWAWGNNSGTQ 791

Query: 516 LGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           LGN  + DR   V VEG      V  +++G +H A ++  G  + WG+N  GQ+G G + 
Sbjct: 792 LGNGSSTDRYTPVWVEGLTG---VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTA 848

Query: 575 ERETPTFV 582
           +R  P  V
Sbjct: 849 DRPRPVDV 856


>gi|156398544|ref|XP_001638248.1| predicted protein [Nematostella vectensis]
 gi|156225367|gb|EDO46185.1| predicted protein [Nematostella vectensis]
          Length = 676

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 21/295 (7%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTW-GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           V  VSCG      +T +G +  W G  + G    G +  ++ W+PR L +   G+ ++KV
Sbjct: 340 VVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFL-EGQSGITITKV 398

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           +CG+  TA ++  G L T+G GT+G LGHG    VSQ K VE L G +V+ ++CG  H  
Sbjct: 399 SCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIM 458

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           A+     D         ++F WG  D GRLG    +    P  ++           CG  
Sbjct: 459 AVT---ADH--------EVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVD 507

Query: 495 LTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEF----VKGISSGSYHV 548
            +  +T   K+   GS    +L   N       + V+      +F       ++ G+ H 
Sbjct: 508 CSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHT 567

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            VL   G +Y++G N+ GQLG         P  VE+L D  V  V CG + + A+
Sbjct: 568 LVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLND--VSYVACGDTFSVAV 620



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 28/291 (9%)

Query: 242 SQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD 301
           S  K +    +P+ LE    + +  +S G    A +T  G +  +G G  G LGH     
Sbjct: 373 SGGKNEKTVWVPRFLEGQSGITITKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNY 432

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           VS  K+VE L G  V+ +SCG     A+T   E++ WG  ++G   +G    + +W P+ 
Sbjct: 433 VSQAKIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRGDNGR--LGTGSQQEYWSPKA 490

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP-KEVESLRG 420
           +    +G+R   V CG   +  ++   +L   G      L    L N   P +EV  LR 
Sbjct: 491 I-SLPEGMRARSVHCGVDCSFAITLENKLLACGSNRCNKLA---LDNEDGPVEEVAVLRQ 546

Query: 421 LKV--------KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
           + V         SVA G  HT  ++             GKL+++G    G+LG+V     
Sbjct: 547 VSVPDFNSVGTSSVAMGTSHTLVLLQ-----------NGKLYSFGSNSFGQLGYVREGVS 595

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
             P  V  L D  +V  +CG   +V ++   +V+  G    G+LGN   +D
Sbjct: 596 RFPQLVESLNDVSYV--ACGDTFSVAVSSDSEVFVWGKGARGRLGNKADED 644



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 38/280 (13%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +M +G G  G  +G      VSQ          K++E  +  +V++IS G+ H   VT +
Sbjct: 414 LMTFGSGTYGC-LGHGTTNYVSQ---------AKIVEDLLGFEVEDISCGSSHIMAVTAD 463

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            EVF WG G +GRLG     +   PK +    G+  +SV CG   + A+T   ++   G 
Sbjct: 464 HEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLACGS 523

Query: 341 N--------NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           N        N    +      R   +P       + V  S VA G  HT ++  +G+L++
Sbjct: 524 NRCNKLALDNEDGPVEEVAVLRQVSVP-----DFNSVGTSSVAMGTSHTLVLLQNGKLYS 578

Query: 393 YGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           +G  +FG LG+   + VS+ P+ VESL    V  VACG   + A+           +   
Sbjct: 579 FGSNSFGQLGYVR-EGVSRFPQLVESLN--DVSYVACGDTFSVAV-----------SSDS 624

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           ++F WG   +GRLG+   E    P C++       +  SC
Sbjct: 625 EVFVWGKGARGRLGNKADEDVREPVCLSLPAAVQVLSVSC 664



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 7/199 (3%)

Query: 430 PWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDF 484
           P H + +V +   R     +   G++  W  +    L    G+ +    +P  +      
Sbjct: 334 PQHDSGVVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGI 393

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVKGISS 543
              + SCG + T  LT  G + T GS  +G LG+      S   +VE  L  E V+ IS 
Sbjct: 394 TITKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFE-VEDISC 452

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GS H+  +T+   V+ WG+  NG+LG G  QE  +P  +      +  SV CG   + AI
Sbjct: 453 GSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAI 512

Query: 604 CLHKSISVGDQSSCSQCRM 622
            L   +     + C++  +
Sbjct: 513 TLENKLLACGSNRCNKLAL 531


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 32/323 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  +NV  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G  + + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L   GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVISFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEAL 585
                 G  D+ +   PT  EAL
Sbjct: 315 ------GPSDTSK---PTHPEAL 328



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 25/266 (9%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L+V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEVPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  + +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSIGALKNLGVIYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA ++             GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDEHTAVLIQ-----------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV 512
            Q  CG   T     L  V+T G  +
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVI 310



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 29/261 (11%)

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  + + A GE H+ ++ T+ ++ + GD + G LG         P+ +++L  L V  V+
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDF 484
           CG  H+ A+       C      G++F WG   +G+LG   GE K     P  +T L   
Sbjct: 82  CGKEHSLAV-------CHK----GRVFAWGAGSEGQLG--IGEFKEISFTPKKITTLNGI 128

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVK 539
             +Q SCG   ++ L+   +V++ G   HGQLG  K     A  + +  +EG      + 
Sbjct: 129 KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIP----LA 184

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ---ERETPTFVEALRDRQVESVVCG 596
            +++G  H   L+  G+ + WG N+ GQL L       +   P  + AL++  V  + CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244

Query: 597 SSITAAICLH-KSISVGDQSS 616
              TA +    K  + GD SS
Sbjct: 245 DEHTAVLIQDGKVFTFGDNSS 265



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA++   G++FT+GD + G LG+        P
Sbjct: 220 VPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L V  IS G +H A++ ++G+VF +G+   G+LG+    +   P+LVE + G+ V  + C
Sbjct: 236 LGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294

Query: 322 GEFQTCALTK-SGEIYTWGH 340
           G + T A    +G++ ++GH
Sbjct: 295 GSYHTLAYVHTTGQVISFGH 314


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 187/405 (46%), Gaps = 49/405 (12%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V +WG G  G  +G      +S++ +Q + +L + LES    +  ++S G  H  ++T +
Sbjct: 30  VALWGNGDQG-RLG------LSESGSQFEPVLCRALESH---EPCSVSCGGAHTLILTDK 79

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G VF  G    G+LG  +  + S  P  V       V  ++ G + + A+T SGE Y WG
Sbjct: 80  GRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWG 138

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G   +G+R    +  P+K+ ++L G+R+  +A G  H+  ++ +GQ+ ++G   FG
Sbjct: 139 RNSEGQLGLGKRAKSVYITPQKM-ESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197

Query: 400 VLGHGNLQ---------NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
            LGHG +          N   P+ +  L  L+++SV+ G  H+A   D            
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADD-----------S 246

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G ++++G     +LG  +      P  +  L     +  SCG   T  +T  G +YT GS
Sbjct: 247 GTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSI--SCGGYHTGAITQDGDIYTWGS 304

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG--------- 561
             HG LG+          +E  L E F+  IS G  H A + S G +++WG         
Sbjct: 305 NEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSYGTYA 362

Query: 562 ---KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              +++ GQLG+G   +   P  +E         V CG + TAAI
Sbjct: 363 TQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 28/234 (11%)

Query: 221 VMIWGE---GVLG-GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           V+ WG    G LG G++ G  D     N+       P+++     L ++++S G  H+A 
Sbjct: 188 VLSWGTNRFGCLGHGEMTGFFDFFKDTNE-----YTPRIIHCLEKLQIRSVSAGLVHSAC 242

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
               G ++ +G+G   +LG   N D S P  +  L    V S+SCG + T A+T+ G+IY
Sbjct: 243 ADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIY 300

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG-D 395
           TWG N HG    G R S     P +L ++L    +S+++CG  HTA +S  G +F++G  
Sbjct: 301 TWGSNEHGCLGSGFRASSK---PLRL-ESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWG 355

Query: 396 GTFGV-----------LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           G++G            LG G   +  +P  +E    L    V+CG  HTAAI++
Sbjct: 356 GSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 167/340 (49%), Gaps = 27/340 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+     V+  G+   G+LG + +     P+ ++ L+ ++V  VSCG+  + A+
Sbjct: 30  GEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAV 89

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G+++ WG  + G   +GE +  S ++P K+   L G+++ +V+CG +H+  +S  G 
Sbjct: 90  CHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKI-KALAGIKIIQVSCGHYHSLALSEDGH 147

Query: 390 LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G N ++ + P++V+SL G+ +  VA G  H+ A+           +
Sbjct: 148 VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL-----------S 196

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG    G+L   G+   E+   P  +  L +   +  SCG   T  LT  G+V
Sbjct: 197 LTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 506 YTMGSAVHGQL-GNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK- 562
           +T G    GQL  +P++  R   ++EG      V  I   SYH +A + + G V + G+ 
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314

Query: 563 -----NANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
                N   Q    ++ +       E L D +V+ +  G+
Sbjct: 315 PSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGA 354



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 20/296 (6%)

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           SGI +   + GE  +  L  +  +Y+ G N+ G   +G+RR +S   P  +   L+ + V
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQ--LGQRRDQSTERPEPI-QALNDLHV 76

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGP 430
             V+CG+ H+  V   G++F +G G+ G LG G  + +S  P ++++L G+K+  V+CG 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQA 489
           +H+ A+ +            G +F+WG   +G+LG     R + +P  V  L      Q 
Sbjct: 137 YHSLALSE-----------DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQV 185

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           + G   +  L+  G  +  GS   GQL   GN   +        G LK   V  IS G  
Sbjct: 186 AAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYE 245

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           H AVLT  G V+T+G N++GQL       +  P  +E +  R V  + C S  T A
Sbjct: 246 HTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIA 300



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECL 311
           P+ +++   L V  +S G +H+  V  +G+VF WG G +G+LG     ++S  P  ++ L
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  VSCG + + AL++ G +++WG N+ G   +G + SRS  +P+K+  +L+G+ +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKV-KSLEGIPL 182

Query: 372 SKVACGEWHTAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S +G  F +G    G   + G+   + + +P  + +L+ L V  ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           G  HTA + +            G++FT+G    G+L
Sbjct: 243 GYEHTAVLTE-----------EGQVFTFGGNSSGQL 267



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 20/252 (7%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           PR+L     G+ + + A GE H+ ++ ++ ++++ GD ++G LG    Q+  +P+ +++L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLP 475
             L V  V+CG  H+ A+       C      GK+F WG   +G+LG   GE K    +P
Sbjct: 72  NDLHVDLVSCGKEHSVAV-------CHK----GKVFAWGAGSEGQLG--IGEFKEISFMP 118

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLK 534
           T +  L     +Q SCG   ++ L+  G V++ G    GQLG  K ++ ++I      L+
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE---TPTFVEALRDRQVE 591
              +  +++G  H   L+  G+ + WG N +GQL L  ++ +E    P  + AL++  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 592 SVVCGSSITAAI 603
            + CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  + +P  +++   + +  +S G  H+  ++++G VF WG   +G+
Sbjct: 99  GAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQ 158

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K +   + P+ V+ L GI +  V+ G   + AL+ +G  + WG N  G   L G +
Sbjct: 159 LGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNK 218

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++  GQ+FT+G  + G L          
Sbjct: 219 VKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ +E + G +V  + C  +HT A V
Sbjct: 278 PQLIEGIGG-RVSQIECASYHTIAYV 302



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S   VY+ G N+ GQLG    Q  E P  ++AL D  V+ V CG   + 
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 602 AICLHK 607
           A+C HK
Sbjct: 88  AVC-HK 92



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S NK +     P  + +   L V  IS G +H A++T+EG+VF +G    G+L     
Sbjct: 213 ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 272

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
                P+L+E + G  V  + C  + T A +  +G++ + G
Sbjct: 273 SGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 152/316 (48%), Gaps = 28/316 (8%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE---CLSGINVQSVSCGEFQT 326
           G  H   +T+EG V+ WG   +G LGH  +     PK ++     S  ++ +++CGEF T
Sbjct: 6   GKLHTVALTEEGRVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHT 64

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            A+ + G ++TWG N +G   +G    ++H LPR++ + L+     K A G  H+ +++ 
Sbjct: 65  LAVGQDGTLWTWGRNQYGQ--LGHGDCKTHKLPRRV-EALEKKICIKAAAGGQHSLVLTE 121

Query: 387 SGQLFTYGDGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           + +++ +G   FG LG    ++  + P  V  LR   V  + CG  H+ A++       K
Sbjct: 122 ANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALL-------K 174

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV-------- 497
           S     +L++WG  D G+LG        +P  +T        Q SCG    +        
Sbjct: 175 SE----QLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAG 230

Query: 498 -GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            G+  L KVYT G    GQLG+ +   R +  V   L    ++ +++G +  A +     
Sbjct: 231 PGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQ 290

Query: 557 VYTWGKNANGQLGLGD 572
           +YTWG +  GQLG GD
Sbjct: 291 LYTWGCSREGQLGHGD 306



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 136/298 (45%), Gaps = 28/298 (9%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL--DGVRVSKVAC 376
            +CG+  T ALT+ G +Y+WG  N GA  +G   S+S  LP+ L   L      ++ +AC
Sbjct: 3   AACGKLHTVALTEEGRVYSWGCAN-GA--LGHGNSKSQLLPKALDRPLIYSMPSITTIAC 59

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           GE+HT  V   G L+T+G   +G LGHG+ +    P+ VE+L        A G  H+   
Sbjct: 60  GEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSL-- 117

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL--LPTCVTRLVDFDFVQASCGRM 494
             ++ +  K  A G  +F       G+LG ++ + K    P  V+RL        +CG  
Sbjct: 118 --VLTEANKVYAFGSNVF-------GQLG-LESKVKYSAAPDIVSRLRRSGVCHITCGYS 167

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            ++ L    ++Y+ G    GQLG    +   +       K+  V+ IS G  H     S 
Sbjct: 168 HSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227

Query: 555 GS---------VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +         VYTWG+   GQLG  +   R  P  V+ L  R + +V  G   +AAI
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAI 285



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 8/287 (2%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAV---MLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
           G  +G++    ++   LLPK L+  +   M  +  I+ G  H   V ++G ++ WG  + 
Sbjct: 23  GCANGALGHGNSK-SQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQDGTLWTWGRNQY 81

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           G+LGH        P+ VE L        + G   +  LT++ ++Y +G N  G  L  E 
Sbjct: 82  GQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFG-QLGLES 140

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
           + +    P  +   L    V  + CG  H+  +  S QL+++G    G LG G+ ++   
Sbjct: 141 KVKYSAAP-DIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPV 199

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
           P+ +   +  +V+ ++CG  H  A V              K++TWG  ++G+LGH +   
Sbjct: 200 PEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLE--KVYTWGRGEEGQLGHDELYS 257

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           + +P  V  L+       + G   +  +    ++YT G +  GQLG+
Sbjct: 258 RCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQLGH 304



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 16/198 (8%)

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
            ACG  HT A+ +            G++++WG A+ G LGH + + +LLP  + R + + 
Sbjct: 3   AACGKLHTVALTEE-----------GRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYS 50

Query: 486 F---VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
                  +CG   T+ +   G ++T G   +GQLG+   K   +      L+++     +
Sbjct: 51  MPSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAA 110

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGL-GDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +G  H  VLT    VY +G N  GQLGL    +    P  V  LR   V  + CG S + 
Sbjct: 111 AGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170

Query: 602 AICLHKSISVGDQSSCSQ 619
           A+   + +    ++ C Q
Sbjct: 171 ALLKSEQLYSWGRNDCGQ 188



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 14/110 (12%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN--------PKAKDRSITVVEGKLKEEFV 538
           V A+CG++ TV LT  G+VY+ G A +G LG+        PKA DR +           +
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCA-NGALGHGNSKSQLLPKALDRPLI-----YSMPSI 54

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
             I+ G +H   +   G+++TWG+N  GQLG GD +  + P  VEAL  +
Sbjct: 55  TTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKK 104



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 12/151 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG- 322
           V +I+ G  H+  + K  +++ WG    G+LG         P+ +       VQ +SCG 
Sbjct: 159 VCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGY 218

Query: 323 --------EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
                   E+    +    ++YTWG    G   +G     S  +P K+  TL    +  V
Sbjct: 219 DHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQ--LGHDELYSRCVP-KVVQTLLARGIRAV 275

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
           A G + +A +  + QL+T+G    G LGHG+
Sbjct: 276 AAGGFSSAAIDEAKQLYTWGCSREGQLGHGD 306


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 160/335 (47%), Gaps = 22/335 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H+A+VT   +++ +G    G+LG      V+ P  ++ L    V+  +CG   T
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G +Y  G NN G   +G+   R  +     F +    ++ +++ G   +A ++ 
Sbjct: 100 IISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQH--KIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            GQLF +GD + G +G  ++ NV  P +V    G  +  ++CG +H+A +          
Sbjct: 158 DGQLFMWGDNSEGQIGLKDVTNVCVPHQV--TIGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
             I G+L+T+G+++ G+LG          +P  V+ + D   +Q +CG   T+ LT    
Sbjct: 207 --IDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPD-KVIQVACGGGHTLVLTE-ES 262

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VY  G    GQLG      + S   V   +K E +  IS G  H A++T  G +YT+G  
Sbjct: 263 VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDG 322

Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            +G+LGLG  +   R  PT         V+ V CG
Sbjct: 323 RHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACG 357



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 19/243 (7%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ H+AIV+ + +L+ +G   +G LG G+   V++P  +++L+  KVK  ACG  HT
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD-GERKLLPTCVTRLVDFDFVQASCG 492
               +           GG ++  G  ++G+LG  D  ER                Q S G
Sbjct: 100 IISTE-----------GGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAG 148

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVL 551
              +  LT  G+++  G    GQ+G    KD +   V  ++   + +  IS G YH A +
Sbjct: 149 SNTSAALTEDGQLFMWGDNSEGQIG---LKDVTNVCVPHQVTIGKPISWISCGYYHSAFV 205

Query: 552 TSGGSVYTWGKNANGQLGLGDS--QERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           T  G +YT+G++ +G+LGL          P  V ++ D+ ++ V CG   T  +      
Sbjct: 206 TIDGELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKVIQ-VACGGGHTLVLTEESVY 264

Query: 610 SVG 612
           + G
Sbjct: 265 AFG 267


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 171/378 (45%), Gaps = 54/378 (14%)

Query: 252 LPKLLESAVMLD--VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            PKL+ +   L   + ++S GA H A +   G++F WG    GRLG K   DV  P  V+
Sbjct: 201 FPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVD 260

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
            L    +  V+CG + +  ++   +++TWG  + G   +G       WLPR +   L  +
Sbjct: 261 FLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ--LGHVEKSDEWLPRSVA-ALHHI 317

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK----EVESLRGLKVKS 425
            + +VA G  H A +S  G ++T+G+G  G LGHG+L + S PK    E+E+  G +V  
Sbjct: 318 PIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTG-EVAD 376

Query: 426 V------ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL--PTC 477
           V      ACG    A++  I+ D        G+L ++G ++ G LG   GE++L   P  
Sbjct: 377 VGSPVLLACG----ASVTLILTDY-------GRLISFGMSEFGALGL--GEKRLAARPHL 423

Query: 478 VT-RLVD-FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD-------RSITV 528
           +T R++D   FV  S G      +T  G VYT G    G +G P  +        R    
Sbjct: 424 ITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYK 483

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR 588
           +E  L +        G+Y V +L+  G V          L LGD      P   +     
Sbjct: 484 LELPLDKRACATSCGGNYTV-ILSKDGCV----------LVLGDDSTEIRPMLYDESNPA 532

Query: 589 QV---ESVVCGSSITAAI 603
            V    SV+CG   + AI
Sbjct: 533 SVMKASSVLCGRYHSGAI 550



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 88/192 (45%), Gaps = 13/192 (6%)

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           LF +G      LG G  Q    PK V +L   G  +  V+ G  H AAI           
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDST-------- 231

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              GKLFTWG  D GRLG   G+    PT V  L D   V  +CG   +  ++   KV+T
Sbjct: 232 ---GKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFT 288

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            GS   GQLG+ +  D  +      L    +  ++ G  H+A L+  G VYTWG+  +GQ
Sbjct: 289 WGSGSKGQLGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQ 348

Query: 568 LGLGDSQERETP 579
           LG GD     TP
Sbjct: 349 LGHGDLNSCSTP 360



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 31/255 (12%)

Query: 210 PLIERKDILKDVMI-------WGEGVLGGDIGGAVDGSVSQNKT----QVDALLPKLLES 258
           P   R D LKD +I       +    +  D+     GS S+ +     + D  LP+ + +
Sbjct: 254 PYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAA 313

Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL----VECLSG- 313
              + +  ++LG +H A ++ +G+V+ WGEG+ G+LGH      S PK     +E  +G 
Sbjct: 314 LHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGE 373

Query: 314 -INVQS---VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR--SRSHWLPRKLFDTLD 367
             +V S   ++CG   T  LT  G + ++G +  GA  +GE+R  +R H +  ++   +D
Sbjct: 374 VADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRI---MD 430

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG------HGNLQNVSQPKEVESLRGL 421
             R   ++ G+ H A V++ G ++T+G G FG +G      + N  +  +P ++E     
Sbjct: 431 KRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDK 490

Query: 422 KVKSVACGPWHTAAI 436
           +  + +CG  +T  +
Sbjct: 491 RACATSCGGNYTVIL 505



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 13/179 (7%)

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD--FVQASCGRMLTVGLTGLGKVYTMGS 510
           LF WG +   +LG    + +  P  V+ L       +  S G      +   GK++T G 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
             HG+LG    KD         LK+E +  ++ G Y  A ++    V+TWG  + GQLG 
Sbjct: 240 CDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGH 299

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICL-----------HKSISVGDQSSCS 618
            +  +   P  V AL    +  V  G    AA+ L           H  +  GD +SCS
Sbjct: 300 VEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCS 358


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 147/316 (46%), Gaps = 27/316 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCG 322
           V  +S    HAA V + GEVF  G+      GH   N  +  P+LVE L G+  + V+ G
Sbjct: 165 VIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVG 224

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHT 381
              T  LT+ G++YT G N HG    G+ + R      K+ + L+GV  V ++A G  + 
Sbjct: 225 LNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRP---TPKIIELLEGVGSVVQIAAGPSYV 281

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDI 439
             V+ +G ++++G G+   LGHG   +  +P+ +++ R   + V  V+ G  H  A+   
Sbjct: 282 LAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDS- 340

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                      G +++WG    G LGH D   K LP  V  L     VQ    +  T  L
Sbjct: 341 ----------SGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVL 390

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSIT------VVEGKLKEEFVKGISSGSYHVAVLTS 553
              G VY  G    G LG P   DR ++       V   L+   V  IS+G YH  V+T+
Sbjct: 391 VDGGSVYGFGWMGFGSLGFP---DRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTN 447

Query: 554 GGSVYTWGKNANGQLG 569
            G ++ +G N   QLG
Sbjct: 448 QGQMFGFGDNERAQLG 463



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 155/377 (41%), Gaps = 27/377 (7%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDV----QNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
           G    N  +V   L  + ES+ M+        ++ G  H  L+ ++  V+  G    G L
Sbjct: 84  GRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHTLLI-RDSSVYSCGSSLCGVL 142

Query: 295 GHKVNMDVSCPKL--VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           GH       C     +   S   V  VS        + +SGE++T G N+  +   G   
Sbjct: 143 GHGAET-TQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQSGEVFTCGDNS--SFCCGHND 199

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           +       +L + L GV   +VA G   T  ++  GQL+T G  T G LGHG+ Q+   P
Sbjct: 200 TNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTP 259

Query: 413 KEVESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
           K +E L G+  V  +A GP +  A+ D            G ++++G      LGH +   
Sbjct: 260 KIIELLEGVGSVVQIAAGPSYVLAVTD-----------NGVVYSFGSGSNLCLGHGEQHD 308

Query: 472 KLLPTCVT--RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVV 529
           +  P  +   R  D   V  S G    V L   G VY+ G    G LG+    D+++  +
Sbjct: 309 EFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPAL 368

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD---SQERETPTFVEALR 586
              LK      + +      VL  GGSVY +G    G LG  D   S +   P  +++LR
Sbjct: 369 VNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLR 428

Query: 587 DRQVESVVCGSSITAAI 603
            R V  +  G   T  +
Sbjct: 429 ARHVSQISTGLYHTVVV 445



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVMLDVQ--NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D   P+ +++    D+   ++S G +HA  +   G V+ WG+G  G LGH   +D + 
Sbjct: 306 QHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTL 365

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P LV CL       V   + +T  L   G +Y +G    G+    +R      +  ++ D
Sbjct: 366 PALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLD 425

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L    VS+++ G +HT +V+  GQ+F +GD     LGH  L+   QP E+
Sbjct: 426 SLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 74/293 (25%)

Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
            N T      P+L+E+   +  + +++G      +T++G+++  G    G+LGH    D 
Sbjct: 197 HNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDR 256

Query: 303 SCPKLVECLSGI-NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL-VGERRSRSHWLPR 360
             PK++E L G+ +V  ++ G     A+T +G +Y++G    G++L +G       + PR
Sbjct: 257 PTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGS---GSNLCLGHGEQHDEFRPR 313

Query: 361 KL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT--------------------- 397
            +  F   D + V  V+ G+ H   + +SG ++++G G                      
Sbjct: 314 AIQTFRRKD-IHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCL 372

Query: 398 --------------------------FGVLGHGNL--------QNVSQPKEVESLRGLKV 423
                                     FG +G G+L          V +P+ ++SLR   V
Sbjct: 373 KSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHV 432

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
             ++ G +HT  + +            G++F +GD ++ +LGH      L PT
Sbjct: 433 SQISTGLYHTVVVTN-----------QGQMFGFGDNERAQLGHDTLRGCLQPT 474


>gi|397483074|ref|XP_003812730.1| PREDICTED: serine/threonine-protein kinase Nek8 [Pan paniscus]
          Length = 692

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G    LG  + + +   ++V+         V+ G  
Sbjct: 296 RGIPRGPVRPAIPPPLSSVYAWGGG----LGTPLRLPMLNTEVVQ---------VAAGRT 342

Query: 325 QTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W     GA     L G           +  +   GV +  VACG++ 
Sbjct: 343 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 402

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  H  A   + 
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA---LS 459

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D GRLG    E    P  V      +  +  CG   ++ LT
Sbjct: 460 TER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILT 511

Query: 501 GLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEFVKGISSGSY 546
             G+    GS    +LG         P    +     S T++    L +E +  I  G+ 
Sbjct: 512 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTA 571

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 628



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 353 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 409

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 410 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 469

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R S  H  P+++     G    +V CG   + I++  GQ    G   F  
Sbjct: 470 GDSGRLGLGTRES--HSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 527 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 584

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L        +CG   TV +   G+VY+ G    G+
Sbjct: 585 FGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGR 644

Query: 516 LG 517
           LG
Sbjct: 645 LG 646



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 38/356 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVA 449

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 450 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 503

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 504 -----IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 558

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  
Sbjct: 559 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAM 617

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           ++ G      + + G VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 618 VACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 247 QVDALLPKLLESAVMLD---VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           QV+  L   L  +  LD   + +I LG  H+A VT  G+ + +G  + G+LG        
Sbjct: 543 QVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSR 602

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL- 362
            P  V+ L GI +  V+CG+  T A+   GE+Y+WG    G   +G RR     LPR + 
Sbjct: 603 APCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGR--LG-RRDEDAGLPRPVQ 659

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTS 387
            D      V+ V+C   +T +   S
Sbjct: 660 LDETHPYTVTSVSCCHGNTLLAVRS 684



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 329 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 387

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 388 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 446

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 485


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 155/325 (47%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +HA L+     V   GE   G+LG +       P+ V+ L  +    VSCG+  + A+
Sbjct: 31  GERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +   ++ P+K+  TL G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFK-EINFTPKKI-TTLTGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G  L + + P+ V SL G+ V  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L+  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG NP  K R   +VE    +  V  I  G  H +A + + G V ++G 
Sbjct: 257 VFTFGDNSSGQLGYNPTPKKRGPQIVER--IDGLVSQIDCGGDHTIAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL++
Sbjct: 315 ------GPSDTSK---PTHPEALKE 330



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 23/265 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L    +S G +H+  V  +G VF WG G +G+LG     +++  PK +  
Sbjct: 65  LPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G+  S S   P+++  +L+G+ 
Sbjct: 125 LTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELS-SQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVS-QPKEVESLRGLKVKSVA 427
           V++VA G  H+  +S  G  F +G  + G L     N+Q  S +P  + +L+ L V  ++
Sbjct: 183 VAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYIS 242

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HTA +           +  GK+FT+GD   G+LG+    +K  P  V R +D    
Sbjct: 243 CGDEHTAVL-----------SQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVER-IDGLVS 290

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAV 512
           Q  CG     G   +  V+T G  V
Sbjct: 291 QIDCG-----GDHTIAYVHTTGQVV 310



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +     PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG    +   + P+ V  L GI V  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            +           L  + V  ++CG+ HTA++S  G++FT+GD + G LG+        P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG  HT A V
Sbjct: 280 QIVERIDGL-VSQIDCGGDHTIAYV 303



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S    QV +  P  + +   L V  IS G +H A+++++G+VF +G+   G+LG+   
Sbjct: 214 ALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCALTK-SGEIYTWGH 340
                P++VE + G+ V  + CG   T A    +G++ ++GH
Sbjct: 274 PKKRGPQIVERIDGL-VSQIDCGGDHTIAYVHTTGQVVSFGH 314



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           EG    E ++  +SG  H  +L +  SV++ G+N+ GQLG   +   + P  V+AL+  +
Sbjct: 18  EGSPGAELLQA-ASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLK 76

Query: 590 VESVVCGSSITAAICLHK 607
              V CG   + A+C HK
Sbjct: 77  FNLVSCGKEHSLAVC-HK 93


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 160/335 (47%), Gaps = 22/335 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G +H A+VT  G+++ +G    G+LG      VS P  V+ L     +   CG   T
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G +Y  G N+ G   +G+   RS +     F      ++ ++A G + +A V+ 
Sbjct: 95  LVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQH--KIKQLAAGSYTSAAVTE 152

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            GQLF +GD + G +G  +   VS P +V+   G  V S++CG +H+A I          
Sbjct: 153 DGQLFVWGDNSEGQIGLADEACVSVPCQVDV--GKPVSSISCGYYHSALITG-------- 202

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G+L+T+G+ + G+LG +  + K   +P  V  +++    + +CG   TV LT    
Sbjct: 203 ---DGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME-KVNKVACGGEHTVVLTET-D 257

Query: 505 VYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VYT G   +GQLG+     + S+      L+   +  I+ G  H AV+   G ++T+G  
Sbjct: 258 VYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDG 317

Query: 564 ANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCG 596
            +G+LGLG+     +  PT         V  V CG
Sbjct: 318 RHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACG 352



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 139/327 (42%), Gaps = 73/327 (22%)

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
           C L +SG ++T+G +    D+           P K +   D  +   ++CG+ HTAIV+ 
Sbjct: 2   CVL-ESGAVFTFGKSRFAEDI-----------PSKFWFKND--KPVLISCGDEHTAIVTG 47

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA----------- 435
           +G+L+ +G   +G LG G+   VS+P  V++L+  K K   CG  HT             
Sbjct: 48  NGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAG 107

Query: 436 -------------------IVDIMVDRCKSNAIG------------GKLFTWGDADKGRL 464
                              ++    ++ K   +             G+LF WGD  +G++
Sbjct: 108 GNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQI 167

Query: 465 GHVDGERKLLPTCVTRLVDFDFVQA----SCGRMLTVGLTGLGKVYTMGSAVHGQLG--- 517
           G  D        CV+     D  +     SCG   +  +TG G++YT G   +G+LG   
Sbjct: 168 GLAD------EACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLP 221

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ER 576
                +R    V G +  E V  ++ G  H  VLT    VYT+G    GQLG G    E 
Sbjct: 222 EQLKNNRVPQPVPGIM--EKVNKVACGGEHTVVLTE-TDVYTFGLGQYGQLGHGTFIFET 278

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             P  V+ LR  ++ ++ CG + TA +
Sbjct: 279 SVPKSVKHLRRHKICNITCGENHTAVV 305



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 20/216 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           + +WG+    G IG A +  VS    QVD   P          V +IS G  H+AL+T +
Sbjct: 156 LFVWGDNS-EGQIGLADEACVSV-PCQVDVGKP----------VSSISCGYYHSALITGD 203

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--NVQSVSCGEFQTCALTKSGEIYTW 338
           GE++ +GE ++G+LG  +   +   ++ + + GI   V  V+CG   T  LT++ ++YT+
Sbjct: 204 GELYTFGEPENGKLG-LLPEQLKNNRVPQPVPGIMEKVNKVACGGEHTVVLTET-DVYTF 261

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G   +G   +G           K    L   ++  + CGE HTA+V+ +G +FT+GDG  
Sbjct: 262 GLGQYGQ--LGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRH 319

Query: 399 GVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
           G LG G  N  N   P    +     V  VACG  H
Sbjct: 320 GKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 148/287 (51%), Gaps = 21/287 (7%)

Query: 281 GEVFCWGEGKDGRLGHKVNMDVS---CPKLVE-CLSGINVQSVSCGEFQTCALTKSGEIY 336
           G ++ +G+G   +LGH    D S    P+ VE    G++V + S  +    A+T+ G ++
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           TWG    G   +G     +  +P K+   LDG+R  KVACG  HT  ++  G++F +G+ 
Sbjct: 126 TWGRGTFGR--LGHEVHETG-IPEKV-PGLDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             G +G  + +    P+E+ESLRG K+  ++ G   +AA+           +   +++TW
Sbjct: 182 KTGCVGVSD-RGTCAPQEIESLRGKKIIDISAGMESSAAL-----------SAEHEVYTW 229

Query: 457 GDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           G  + G+LG   G R +  PT +  L +   VQ +CG+   + L+  G+VY  G  + GQ
Sbjct: 230 GADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQ 289

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
             N K  D +I  V   LKE  VK I++G  H AV+   G ++T G+
Sbjct: 290 TANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 20/337 (5%)

Query: 272 KHAALVTKEG-EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
           KH     KEG  ++ WG G+ G+LG     D S P++ + +        + G   T A+T
Sbjct: 4   KHLNAQEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAIT 63

Query: 331 KSGEIYTWGH---NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           + G ++T+G    N  G    G+  ++   LPR++ D  DG+ V   +  + H A V+  
Sbjct: 64  QGGVLWTFGQGDSNQLGHGDTGDCSNQV--LPREVEDAFDGLSVVNCSICDGHMAAVTED 121

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G ++T+G GTFG LGH  +     P++V  L G++   VACG  HT A+ D         
Sbjct: 122 GSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD--------- 171

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              G++F WG+   G +G V       P  +  L     +  S G   +  L+   +VYT
Sbjct: 172 --DGRVFAWGNNKTGCVG-VSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYT 228

Query: 508 MGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            G+  +GQLG    A+  S       L+   +  I+ G YH+  L++ G VY WG+   G
Sbjct: 229 WGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQG 288

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           Q       +   P  ++AL++ +V+ +  G S +A +
Sbjct: 289 QTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVV 325



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 9/138 (6%)

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G +YT GS   GQLG     D S+  +  ++  E     ++G+   A +T GG ++T+G+
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCG-SSITAAIC-LHKSISVGDQSSCSQC 620
             + QLG GD+ +            R+VE    G S +  +IC  H +    D S  +  
Sbjct: 74  GDSNQLGHGDTGDCSNQVL-----PREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWG 128

Query: 621 RMPFGFRRKKHNCYNCGL 638
           R  FG  R  H  +  G+
Sbjct: 129 RGTFG--RLGHEVHETGI 144


>gi|30039692|ref|NP_835464.1| serine/threonine-protein kinase Nek8 [Homo sapiens]
 gi|34098463|sp|Q86SG6.1|NEK8_HUMAN RecName: Full=Serine/threonine-protein kinase Nek8; AltName:
           Full=Never in mitosis A-related kinase 8;
           Short=NimA-related protein kinase 8; AltName:
           Full=Nima-related protein kinase 12a
 gi|29826090|gb|AAO88243.1| NIMA-related kinase 12a [Homo sapiens]
 gi|30026015|gb|AAP04006.1| NIMA-family kinase NEK8 [Homo sapiens]
 gi|85567283|gb|AAI12241.1| NIMA-related kinase 8 [Homo sapiens]
 gi|109731802|gb|AAI13706.1| NIMA (never in mitosis gene a)- related kinase 8 [Homo sapiens]
 gi|119571521|gb|EAW51136.1| NIMA (never in mitosis gene a)- related kinase 8, isoform CRA_b
           [Homo sapiens]
 gi|313883230|gb|ADR83101.1| NIMA (never in mitosis gene a)- related kinase 8 [synthetic
           construct]
          Length = 692

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G    LG  + + +   ++V+         V+ G  
Sbjct: 296 RGIPRGPVRPAIPPPLSSVYAWGGG----LGTPLRLPMLNTEVVQ---------VAAGRT 342

Query: 325 QTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W     GA     L G           +  +   GV +  VACG++ 
Sbjct: 343 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 402

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  H  A   + 
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA---LS 459

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D GRLG    E    P  V      +  +  CG   ++ LT
Sbjct: 460 TER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILT 511

Query: 501 GLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEFVKGISSGSY 546
             G+    GS    +LG         P    +     S T++    L +E +  I  G+ 
Sbjct: 512 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTA 571

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 628



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 353 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 409

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 410 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 469

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R S  H  P+++     G    +V CG   + I++  GQ    G   F  
Sbjct: 470 GDSGRLGLGTRES--HSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 527 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 584

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L        +CG   TV +    +VY+ G    G+
Sbjct: 585 FGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR 644

Query: 516 LG 517
           LG
Sbjct: 645 LG 646



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 148/356 (41%), Gaps = 38/356 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVA 449

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 450 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 503

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 504 -----IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 558

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  
Sbjct: 559 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAM 617

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           ++ G      + +   VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 618 VACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 7/145 (4%)

Query: 247 QVDALLPKLLESAVMLD---VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           QV+  L   L  +  LD   + +I LG  H+A VT  G+ + +G  + G+LG        
Sbjct: 543 QVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSR 602

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL- 362
            P  V+ L GI +  V+CG+  T A+    E+Y+WG    G   +G RR     LPR + 
Sbjct: 603 APCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR--LG-RRDEDAGLPRPVQ 659

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTS 387
            D      V+ V+C   +T +   S
Sbjct: 660 LDETHPYTVTSVSCCHGNTLLAVRS 684



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 329 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 387

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 388 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 446

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 485


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 30/324 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG    G+L   G     +   P  +  L +   V  SCG   T  LT  GKV
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKV 257

Query: 506 YTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGKN 563
           +T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G  
Sbjct: 258 FTFGDNCSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH- 314

Query: 564 ANGQLGLGDSQERETPTFVEALRD 587
                G  D+ +   PT  EAL +
Sbjct: 315 -----GPSDTSK---PTHPEALTE 330



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 156/317 (49%), Gaps = 35/317 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVL---GHGNLQNVSQPKEVESLRGLKVKSVA 427
           +++VA G  H+  +S  G  F +G  + G L   G       ++P  + +L+ L V  ++
Sbjct: 183 LAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYIS 242

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D    
Sbjct: 243 CGDEHTAVLTQ-----------DGKVFTFGDNCSGQLGYSPTPEKRGPQLVER-IDGLVS 290

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAV---HG-----QLGNPKAK----DRSITVVEGKLKE 535
           Q  CG   T     L  V+T G  V   HG     +  +P+A     D S  +    L +
Sbjct: 291 QIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDLVD 345

Query: 536 EFVKGISSGSYHVAVLT 552
             VK I +G+Y   V T
Sbjct: 346 VQVKHIFAGTYANFVTT 362



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 150/326 (46%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--ADSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L G+K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ +++  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPAQSNKPLSI--GALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
             +          L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
          Length = 1060

 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 163/385 (42%), Gaps = 69/385 (17%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVT-------KEGEVFCWGEGKDGRLGHKVNMD--- 301
            P+++       V  +S G  H+A++          G VF +G G  GRLG+ ++ +   
Sbjct: 80  FPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSEI 139

Query: 302 ----------------VSCPKLVECLSGI--NVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
                              P+ V    G+  NV ++SCG   T   T  G +Y WG   H
Sbjct: 140 ISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGANHTLVTTADGYLYAWGVGAH 199

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF----- 398
           G  ++G     + ++P K+    D   +SK A G  H+  +   G ++++G G       
Sbjct: 200 G--VLGNGSVANRYIPVKVIFPQD-TFISKCAAGARHSMALDIKGNIWSWGYGGIVHSIF 256

Query: 399 ------GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
                 G LG G+ ++   P  +E     +V  ++CG  H+A +     DR       G 
Sbjct: 257 HIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVFQISCGDSHSACL-----DRF------GT 305

Query: 453 LFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++TWG    G+LG  +    +L PT V  L     +Q SCG   T+ L+  GK+Y  GS 
Sbjct: 306 VYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGST 365

Query: 512 VHGQLGNPKAKDRSIT--------VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
               LG  K  D  I+        V E   K  FV   +SG Y  A +   G + TWG  
Sbjct: 366 ----LGFNKQTDGLISHTVYSPEPVAETGFKNIFV---TSGPYSFAAINIFGDLLTWGLG 418

Query: 564 ANGQLGLGDSQERETPTFVEALRDR 588
              +LG GDS++   P FV  LR R
Sbjct: 419 TGYRLGHGDSKDHVIPKFVSYLRTR 443



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 190/479 (39%), Gaps = 92/479 (19%)

Query: 216 DILKDVMIWGEGVLGGDIGGAV--DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKH 273
           DI  ++  WG G +   I   +  +G +    T+     P L+E     +V  IS G  H
Sbjct: 238 DIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTR-SCFTPNLIEIFDTYEVFQISCGDSH 296

Query: 274 AALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           +A + + G V+ WG  + G+LG   +  DV  P +V+ L GI++  VSCG   T AL+ S
Sbjct: 297 SACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSS 356

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           G+IY WG             S + + P  + +T  G +   V  G +  A ++  G L T
Sbjct: 357 GKIYQWGSTLGFNKQTDGLISHTVYSPEPVAET--GFKNIFVTSGPYSFAAINIFGDLLT 414

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLR---------------GLKVKSVA---CGPWHTA 434
           +G GT   LGHG+ ++   PK V  LR                 KV+        P+   
Sbjct: 415 WGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAFKVEDTVEKTVNPYDER 474

Query: 435 AIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF---DFVQA 489
            I  I V       +   G ++TWG A+ G  G       L   C   L +       + 
Sbjct: 475 RIQQIAVGDAHGALLTCNGTVYTWG-ANNGT-GCNSTTEPLENYCEPILFNHFSSKITKI 532

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR-----------SITVVEG------- 531
           +CG   T+ +T  G +++ GS   GQLG+   + R            I V  G       
Sbjct: 533 ACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNIENCINVFAGIDNSGCI 592

Query: 532 -------KLKEEF----------------------------------VKGISSGSYHVAV 550
                   +K+E+                                  V  ++ G  H   
Sbjct: 593 CSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREVNITGVHSVALGPMHSLA 652

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           LTS G++Y  G  + G+LG G++    + TFV+   D +  +V  G+S + AI +   +
Sbjct: 653 LTSDGTLYAAGAGSGGRLGTGNTT--NSFTFVQVKTDHKFVAVGAGASHSLAISMENDL 709



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 39/270 (14%)

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            + ++G   F  LG G   N S+ P+ +    G +V  V+CG +H+A    ++V   + N
Sbjct: 57  NVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSA----VLVCSSREN 112

Query: 448 AIGGKLFTWGDADKGRLG-HVDGERKLL--------------------PTCVTRLVDFDF 486
              G +FT+G  + GRLG H+D   +++                    P  ++  +  + 
Sbjct: 113 INAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNV 172

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   T+  T  G +Y  G   HG LGN    +R I V     ++ F+   ++G+ 
Sbjct: 173 VTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFPQDTFISKCAAGAR 232

Query: 547 HVAVLTSGGSVYTWGKNA-----------NGQLGLGDSQERETPTFVEALRDRQVESVVC 595
           H   L   G++++WG              NG+LGLG ++   TP  +E     +V  + C
Sbjct: 233 HSMALDIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNLIEIFDTYEVFQISC 292

Query: 596 GSSITAAICLHKSISVGDQSSCSQCRMPFG 625
           G S +A  CL +  +V    SC   ++  G
Sbjct: 293 GDSHSA--CLDRFGTVYTWGSCRGGKLGLG 320



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 141/328 (42%), Gaps = 41/328 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--------------- 311
           ++ G    A +   G++  WG G   RLGH  + D   PK V  L               
Sbjct: 396 VTSGPYSFAAINIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDE 455

Query: 312 ----------SGIN------VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
                       +N      +Q ++ G+     LT +G +YTWG NN G           
Sbjct: 456 AAFKVEDTVEKTVNPYDERRIQQIAVGDAHGALLTCNGTVYTWGANN-GTGCNSTTEPLE 514

Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           ++    LF+     +++K+ACG  HT  V+ +G LF++G    G LGHG+L++   P  V
Sbjct: 515 NYCEPILFNHFSS-KITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSV 573

Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
            ++      +V  G  ++  I  +  +    +   G L+ +G +  G+LG   GE     
Sbjct: 574 SNIE--NCINVFAGIDNSGCICSVSHENMMKDEY-GTLWVFGSSTCGKLGL--GENMTSA 628

Query: 476 TCVTRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
               R V+   V + + G M ++ LT  G +Y  G+   G+LG     + S T V+ K  
Sbjct: 629 VMTPREVNITGVHSVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNTTN-SFTFVQVKTD 687

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            +FV  + +G+ H   ++    +Y WG+
Sbjct: 688 HKFV-AVGAGASHSLAISMENDLYGWGE 714



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 139/320 (43%), Gaps = 53/320 (16%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVS-CPKLVECLSGINVQSVSCGEFQTCALT-------KSG 333
            V  WG+     LG  V ++ S  P+++   SG  V  VSCG++ +  L         +G
Sbjct: 57  NVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAG 116

Query: 334 EIYTWGHNNHG---------ADLVGER-----RSRSHW---LPRKLFDTLDGVR--VSKV 374
            ++T+G  N G         ++++ ++     +    W   +P+ +  ++ G+R  V  +
Sbjct: 117 TVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSI-GLRNNVVTI 175

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           +CG  HT + +  G L+ +G G  GVLG+G++ N   P +V   +   +   A G  H+ 
Sbjct: 176 SCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFPQDTFISKCAAGARHSM 235

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDAD-----------KGRLGHVDGERKLLPTCVTRLVD 483
           A+            I G +++WG               GRLG         P  +     
Sbjct: 236 AL-----------DIKGNIWSWGYGGIVHSIFHIIHRNGRLGLGSTRSCFTPNLIEIFDT 284

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGI 541
           ++  Q SCG   +  L   G VYT GS   G+  LGN  +     T+V+  LK   +  +
Sbjct: 285 YEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTIVQ-SLKGIHIIQV 343

Query: 542 SSGSYHVAVLTSGGSVYTWG 561
           S GS +   L+S G +Y WG
Sbjct: 344 SCGSGNTLALSSSGKIYQWG 363



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 123/290 (42%), Gaps = 60/290 (20%)

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTS-------GQLFTYGDGTFGVLGH---GNLQ 407
            PR +     G RV++V+CG++H+A++  S       G +FT+G G  G LG+    N +
Sbjct: 80  FPR-VIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFTFGLGNSGRLGYHIDTNSE 138

Query: 408 NVSQ----------------PKEVESLRGLK--VKSVACGPWHTAAIVDIMVDRCKSNAI 449
            +SQ                P+ V    GL+  V +++CG  HT                
Sbjct: 139 IISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGANHTLV-----------TTA 187

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT-- 507
            G L+ WG    G LG+     + +P  V    D    + + G   ++ L   G +++  
Sbjct: 188 DGYLYAWGVGAHGVLGNGSVANRYIPVKVIFPQDTFISKCAAGARHSMALDIKGNIWSWG 247

Query: 508 MGSAVH---------GQLGNPKAKDRSITVVEGKLKEEF----VKGISSGSYHVAVLTSG 554
            G  VH         G+LG    +    +     L E F    V  IS G  H A L   
Sbjct: 248 YGGIVHSIFHIIHRNGRLGLGSTR----SCFTPNLIEIFDTYEVFQISCGDSHSACLDRF 303

Query: 555 GSVYTWGKNANGQLGLGDS-QERETPTFVEALRDRQVESVVCGSSITAAI 603
           G+VYTWG    G+LGLG+   +   PT V++L+   +  V CGS  T A+
Sbjct: 304 GTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGNTLAL 353



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 169/437 (38%), Gaps = 83/437 (18%)

Query: 216 DILKDVMIWGEGV---LG-GDIGGAVDG---SVSQNKTQVDALLPKLLESAVMLD----- 263
           +I  D++ WG G    LG GD    V     S  + +  +D LL    E+A  ++     
Sbjct: 407 NIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRVYIDNLLKTYDEAAFKVEDTVEK 466

Query: 264 ---------VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSC-PKLVECLS 312
                    +Q I++G  H AL+T  G V+ WG             ++  C P L    S
Sbjct: 467 TVNPYDERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFS 526

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL------FDTL 366
              +  ++CG   T A+T +G +++WG N  G    G+ RSR   +P  +       +  
Sbjct: 527 S-KITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRV--VPDSVSNIENCINVF 583

Query: 367 DGVRVSKVACGEWHTAIVSTS-GQLFTYGDGTFGVLGHG-NLQN-VSQPKEVESLRGLKV 423
            G+  S   C   H  ++    G L+ +G  T G LG G N+ + V  P+EV ++ G  V
Sbjct: 584 AGIDNSGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREV-NITG--V 640

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT------C 477
            SVA GP H+ A+             GG+L T    +      V  + K +         
Sbjct: 641 HSVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNTTNSFTFVQVKTDHKFVAVGAGASHS 700

Query: 478 VTRLVDFDFVQASCGRMLTVG---------------------------------LTGLGK 504
           +   ++ D      G+ LT                                   L+  G 
Sbjct: 701 LAISMENDLYGWGEGKYLTFDEDVLEPTIINTIPSTTGQAKVVALAVAANHSLVLSQSGN 760

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG----ISSGSYHVAVLTSGGSVYT 559
           +   G   +GQLG     K  +   ++  L    V+G    +++  Y  +    GG  ++
Sbjct: 761 LSGFGDNSYGQLGVFLSMKSSANNFIKMPLPVN-VQGNIVCVATSRYFSSCSNLGGDAFS 819

Query: 560 WGKNANGQLGLGDSQER 576
           WG   + +LG+G+++ +
Sbjct: 820 WGLAKDHRLGIGETKSK 836



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +++LG  H+  +T +G ++  G G  GRLG       +    V+  +     +V  G 
Sbjct: 640 VHSVALGPMHSLALTSDGTLYAAGAGSGGRLG--TGNTTNSFTFVQVKTDHKFVAVGAGA 697

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A++   ++Y WG    G  L  +       +   +  T    +V  +A    H+ +
Sbjct: 698 SHSLAISMENDLYGWG---EGKYLTFDEDVLEPTIINTIPSTTGQAKVVALAVAANHSLV 754

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +S SG L  +GD ++G LG       S    ++    + V+           IV +   R
Sbjct: 755 LSQSGNLSGFGDNSYGQLGVFLSMKSSANNFIKMPLPVNVQ---------GNIVCVATSR 805

Query: 444 CKSNA--IGGKLFTWGDADKGRLGHVDGERKLL 474
             S+   +GG  F+WG A   RLG  + + K++
Sbjct: 806 YFSSCSNLGGDAFSWGLAKDHRLGIGETKSKII 838


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVTNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG         +PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSDPK-------VIE-NIRDQTISYISCGESHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACG 357



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG S TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALI 310



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 173/359 (48%), Gaps = 38/359 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           VQ +S+G KH+  + K+G +   G+   G+LG K N   S  + +  L    +  VSCG 
Sbjct: 36  VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNN--SRIEQISSLEAQTIVDVSCGT 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A+   G IY+WG  + G    G+  S+ ++ P+++   L+  ++ +++CG +H+  
Sbjct: 94  NHSVAMCDEGNIYSWGDGSEGQLGTGKFSSK-NFTPKRITGLLNR-KIIQISCGNFHSVA 151

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           ++  G++F++G    G LG G+ + N + P+ V+SL+G+ +  V  G   T A+      
Sbjct: 152 LAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFAL------ 205

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                ++ G +F WG  + G+LG  +  +K    P  V  L D      SCG   T  L 
Sbjct: 206 -----SMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLN 260

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF---VKGISSGSYHVAV-LTSGGS 556
             G VYT G   +GQLG       S+     +  EE+   V  ++ G YH  + + +   
Sbjct: 261 KDGIVYTFGDDTYGQLGQQSGNQTSVP----QKIEEYSRQVSQVACGRYHTLLYVFTCNR 316

Query: 557 VYTWGKNANGQLGLGDSQER----------ETPTFVEA--LRDRQVESVVCGSSITAAI 603
           + ++GK +  Q G  +S ++          +  + V A  L+D  V+ +  G+++  A+
Sbjct: 317 IVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNNVGFAV 375



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 113/219 (51%), Gaps = 12/219 (5%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           ++  WG+G          +G +   K       PK +   +   +  IS G  H+  + +
Sbjct: 104 NIYSWGDGS---------EGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAE 154

Query: 280 EGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           +G VF WG+ K G+LG    + + + P+LV+ L GI +  V+ G  QT AL+ SG ++ W
Sbjct: 155 DGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAW 214

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G NN G         +  + P  + D+L  + V+ ++CGE HTA+++  G ++T+GD T+
Sbjct: 215 GRNNAGQLGFKNDAKKGTFKPYAV-DSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTY 273

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           G LG  +    S P+++E     +V  VACG +HT   V
Sbjct: 274 GQLGQQSGNQTSVPQKIEE-YSRQVSQVACGRYHTLLYV 311



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 39/309 (12%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGI 314
           LE+  ++DV   S G  H+  +  EG ++ WG+G +G+LG  K +     PK +  L   
Sbjct: 81  LEAQTIVDV---SCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNR 137

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            +  +SCG F + AL + G +++WG N  G   +G +         +L  +L G+ + +V
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQA--TPQLVKSLKGIPLVQV 195

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWH 432
             G   T  +S SG +F +G    G LG  N   +   +P  V+SLR L V  ++CG  H
Sbjct: 196 TAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEH 255

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV---TRLVDFDFVQA 489
           TA +              G ++T+GD   G+LG   G +  +P  +   +R V     Q 
Sbjct: 256 TAVLNK-----------DGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVS----QV 300

Query: 490 SCGRMLT-VGLTGLGKVYTMGSAVHGQLGN------------PKAKDRSITVVEGKLKEE 536
           +CGR  T + +    ++ + G     Q GN            P A D S  V    LK+ 
Sbjct: 301 ACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDV 360

Query: 537 FVKGISSGS 545
            VK I +G+
Sbjct: 361 NVKWIFAGN 369



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 131/288 (45%), Gaps = 25/288 (8%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           +VQ VS GE  +  L K G + + G N +G   +G + + S     +   +L+   +  V
Sbjct: 35  SVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQ--LGRKGNNSR---IEQISSLEAQTIVDV 89

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHT 433
           +CG  H+  +   G ++++GDG+ G LG G   + +  PK +  L   K+  ++CG +H+
Sbjct: 90  SCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHS 149

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQAS 490
            A+ +            G++F+WG    G+LG   G + +    P  V  L     VQ +
Sbjct: 150 VALAE-----------DGRVFSWGQNKCGQLGL--GSQIINQATPQLVKSLKGIPLVQVT 196

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            G   T  L+  G V+  G    GQLG  N   K          L++  V  IS G  H 
Sbjct: 197 AGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHT 256

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
           AVL   G VYT+G +  GQLG     +   P  +E    RQV  V CG
Sbjct: 257 AVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEE-YSRQVSQVACG 303



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 37/250 (14%)

Query: 390 LFTYGDGTFGVLG---------HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           ++ +GD  FG L          H    +  Q KE        V+ V+ G  H+  ++   
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKE-------SVQKVSIGEKHSLYLLK-- 51

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                     G L + G    G+LG      ++    ++ L     V  SCG   +V + 
Sbjct: 52  ---------DGTLLSCGQNPYGQLGRKGNNSRI--EQISSLEAQTIVDVSCGTNHSVAMC 100

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITV--VEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
             G +Y+ G    GQLG  K   ++ T   + G L  + ++ IS G++H   L   G V+
Sbjct: 101 DEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQ-ISCGNFHSVALAEDGRVF 159

Query: 559 TWGKNANGQLGLGDS-QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
           +WG+N  GQLGLG     + TP  V++L+   +  V  G S T A+ +  ++    +++ 
Sbjct: 160 SWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNA 219

Query: 618 SQCRMPFGFR 627
            Q     GF+
Sbjct: 220 GQ----LGFK 225


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 167/340 (49%), Gaps = 27/340 (7%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G  H+ L+     V+  G+   G+LG + +     P+ ++ L+ ++V  VSCG+  + A+
Sbjct: 30  GEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAV 89

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G+++ WG  + G   +GE +  S ++P K+   L G+++ +V+CG +H+  +S  G 
Sbjct: 90  CHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKI-KALAGIKIIQVSCGHYHSLALSEDGH 147

Query: 390 LFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G N ++ + P++V+SL G+ +  VA G  H+ A+           +
Sbjct: 148 VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL-----------S 196

Query: 449 IGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
           + G  F WG    G+L   G+   E+   P  +  L +   +  SCG   T  LT  G+V
Sbjct: 197 LTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 506 YTMGSAVHGQL-GNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK- 562
           +T G    GQL  +P++  R   ++EG      V  I   SYH +A + + G V + G+ 
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314

Query: 563 -----NANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
                N   Q    ++ +       E L D +V+ +  G+
Sbjct: 315 PSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGA 354



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 20/296 (6%)

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           SGI +   + GE  +  L  +  +Y+ G N+ G   +G+RR +S   P  +   L+ + V
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQ--LGQRRDQSTERPEPI-QALNDLHV 76

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGP 430
             V+CG+ H+  V   G++F +G G+ G LG G  + +S  P ++++L G+K+  V+CG 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQA 489
           +H+ A+ +            G +F+WG   +G+LG     R + +P  V  L      Q 
Sbjct: 137 YHSLALSE-----------DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQV 185

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           + G   +  L+  G  +  GS   GQL   GN   +        G LK   V  IS G  
Sbjct: 186 AAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYE 245

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           H AVLT  G V+T+G N++GQL       +  P  +E +  R V  + C S  T A
Sbjct: 246 HTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIA 300



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 121/216 (56%), Gaps = 17/216 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECL 311
           P+ +++   L V  +S G +H+  V  +G+VF WG G +G+LG     ++S  P  ++ L
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  VSCG + + AL++ G +++WG N+ G   +G + SRS  +P+K+  +L+G+ +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG-KNSRSQAIPQKV-KSLEGIPL 182

Query: 372 SKVACGEWHTAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S +G  F +G    G   + G+   + + +P  + +L+ L V  ++C
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           G  HTA + +            G++FT+G    G+L
Sbjct: 243 GYEHTAVLTE-----------EGQVFTFGGNSSGQL 267



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 20/252 (7%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           PR+L     G+ + + A GE H+ ++ ++ ++++ GD ++G LG    Q+  +P+ +++L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLP 475
             L V  V+CG  H+ A+       C      GK+F WG   +G+LG   GE K    +P
Sbjct: 72  NDLHVDLVSCGKEHSVAV-------CHK----GKVFAWGAGSEGQLG--IGEFKEISFMP 118

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLK 534
           T +  L     +Q SCG   ++ L+  G V++ G    GQLG  K ++ ++I      L+
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE---TPTFVEALRDRQVE 591
              +  +++G  H   L+  G+ + WG N +GQL L  ++ +E    P  + AL++  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 592 SVVCGSSITAAI 603
            + CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 4/206 (1%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  + +P  +++   + +  +S G  H+  ++++G VF WG   +G+
Sbjct: 99  GAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQ 158

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K +   + P+ V+ L GI +  V+ G   + AL+ +G  + WG N  G   L G +
Sbjct: 159 LGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNK 218

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++  GQ+FT+G  + G L          
Sbjct: 219 VKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ +E + G +V  + C  +HT A V
Sbjct: 278 PQLIEGIGG-RVSQIECASYHTIAYV 302



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S   VY+ G N+ GQLG    Q  E P  ++AL D  V+ V CG   + 
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 602 AICLHK 607
           A+C HK
Sbjct: 88  AVC-HK 92



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S NK +     P  + +   L V  IS G +H A++T+EG+VF +G    G+L     
Sbjct: 213 ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 272

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
                P+L+E + G  V  + C  + T A +  +G++ + G
Sbjct: 273 SGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 158/337 (46%), Gaps = 26/337 (7%)

Query: 250  ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            +L P  ++   +  V  I+ G  H   V ++G V+ WG    G+LG         P  V+
Sbjct: 1015 SLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQ 1074

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L+G+   ++S G+  T AL + G ++ WG N+ G    G    R+   P ++   L GV
Sbjct: 1075 GLTGVT--AISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRA--TPVQV-QGLTGV 1129

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
                +A G  HT  +   G ++ +G  ++G LG G   + + P +V+ L G  V ++A G
Sbjct: 1130 I--AIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAG 1185

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
              HT A+      R       G ++ WG  D G+LG     R+L P  V  L     + A
Sbjct: 1186 SLHTVAL------RQD-----GTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTIAA 1234

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHV 548
              G   T  +   G  +T G  + GQLG+    DR+  V V+G      V  +++G  H 
Sbjct: 1235 --GYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTG---VSALAAGYAHT 1289

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
             V+   G+V+ WG N+  QLG G S +R TP  VEAL
Sbjct: 1290 VVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL 1326



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 22/370 (5%)

Query: 251  LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            LLP  ++         I+ G  H   V ++G V+ WG    G+LG         P  V+ 
Sbjct: 812  LLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQV 871

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
               ++V +++ G +   A  + G ++TWG N++G    G    R   LP ++   +D   
Sbjct: 872  QGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRL--LPVQVQGLMD--- 926

Query: 371  VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
            V+ +A G +H A     G L+T+G  ++G LG G L     P +V+ L  + V ++A G 
Sbjct: 927  VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGG 984

Query: 431  WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            +H AA               G L+TWG    G+LG     + L P  V           +
Sbjct: 985  YHMAAA-----------GQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIA 1033

Query: 491  CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
             G   T+ +   G V++ G   +GQLG+     +S+T V+ +     V  IS+G  H   
Sbjct: 1034 AGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTA-QSLTPVQVQ-GLTGVTAISAGDAHTVA 1091

Query: 551  LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
            L   G+V+ WG+N+ GQLG G +  R TP  V+ L    V ++  GS  T A+    ++ 
Sbjct: 1092 LRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQDGTVW 1149

Query: 611  VGDQSSCSQC 620
               ++S  Q 
Sbjct: 1150 AWGRNSWGQL 1159



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 154/332 (46%), Gaps = 26/332 (7%)

Query: 273 HAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKS 332
           H   V ++G V+ WG G  G+LG    MD S P  V+ L+G+   +++ G   T AL + 
Sbjct: 532 HLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTGVT--AIAAGSNHTVALRQD 589

Query: 333 GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           G ++ WG NN+G   +G+  +  H  P ++      V    +A G  HT  +   G ++T
Sbjct: 590 GTVWAWGFNNYGQ--LGDGTTAGHLTPVQVPGVTGAV---AIAAGGSHTVALLQDGTVWT 644

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G   +G LG G   +   P +V+ L    V ++A    HT A+      R       G 
Sbjct: 645 WGYNIWGQLGDGTTTHRHSPVQVQGLA--DVIAIATNNGHTVAV------RQD-----GT 691

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           ++TWG    G+LG     ++L P  V  L D   +  S  +  TV +     ++  G   
Sbjct: 692 VWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSSQ--TVAMRQDRTLWAWGDNH 749

Query: 513 HGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            GQLG+     R   V V+G +    V  +++G YH+A     G+++TWG N+ GQLG G
Sbjct: 750 WGQLGDGTTTRRLTPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 806

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               R  P  V+ L      ++  G S T A+
Sbjct: 807 PLSYRLLPVQVQGLTSATATAIAAGDSHTVAV 838



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 151/339 (44%), Gaps = 26/339 (7%)

Query: 244  NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
            + T   +L P  ++   +  V  IS G  H   + ++G V+ WG    G+LG       +
Sbjct: 1061 DGTTAQSLTPVQVQG--LTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRA 1118

Query: 304  CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
             P  V+ L+G  V +++ G   T AL + G ++ WG N+ G    G    R+   P ++ 
Sbjct: 1119 TPVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRA--TPVQV- 1173

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
              L GV    +A G  HT  +   G ++ +G    G LG G       P +V+ L G  V
Sbjct: 1174 QGLTGVI--AIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTG--V 1229

Query: 424  KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
             ++A G +HTAA+      R    A     +TWG    G+LG      +  P  V  L  
Sbjct: 1230 TTIAAGYFHTAAV------RQDGTA-----WTWGFNLWGQLGDGTFTDRATPVQVQGLTG 1278

Query: 484  FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
               + A     + VG  G   V+  G+    QLGN  + DRS  V    L   F   +++
Sbjct: 1279 VSALAAGYAHTVVVGEDG--TVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGAFS--LAA 1334

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            G +H   ++  G+ + WG+N  GQ+G G + +R TP  V
Sbjct: 1335 GRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNV 1373



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 149/340 (43%), Gaps = 44/340 (12%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALT 330
             H   V ++G V+ WG   DG+LG         P  V+ ++G    +++ G + T A +
Sbjct: 82  GNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSP--VQVMTGAT--AIAAGIYHTVAAS 137

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
           + G ++TWG N+ G   +G+  S   + P ++   L GV  + VA G  H+A +   G +
Sbjct: 138 QDGTVWTWGRNSSGQ--LGDGTSIQRFSPVQV-QGLTGV--TAVAAGRNHSAALGQGGTV 192

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI- 449
           +T+GD   G LG G       P +V+ L G               ++ I  +  ++ A+ 
Sbjct: 193 WTWGDNLVGQLGDGTSTQRLTPVQVQGLTG---------------VIAISANDSETVALR 237

Query: 450 -GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G ++ WG+   G+LG      +  P  V  L     + A  G    V L   G ++  
Sbjct: 238 QDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGG--FAVALRQDGTLWAW 295

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG------ISSGSYHVAVLTSGGSVYTWGK 562
           GS   GQLGN            G  + E V+G      I++   H   L   G+++ WG 
Sbjct: 296 GSNSRGQLGNGT--------TFGSYRPEQVQGLTGVTAIAASGIHTVALRQDGTLWAWGN 347

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           N++GQLG G +  R TP  V+ L    V ++  G   T A
Sbjct: 348 NSSGQLGDGTTTVRFTPVQVQGLTG--VTAIAAGYLYTVA 385



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 163/389 (41%), Gaps = 56/389 (14%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           +  V  I+ G   A  + ++G ++ WG    G+LG+        P+ V+ L+G+   +++
Sbjct: 270 LTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVT--AIA 327

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
                T AL + G ++ WG+N+ G   +G+  +   + P ++   L GV  + +A G  +
Sbjct: 328 ASGIHTVALRQDGTLWAWGNNSSGQ--LGDGTTTVRFTPVQV-QGLTGV--TAIAAGYLY 382

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA----- 435
           T      G ++ +GD  +G LG G       P +V+ L G  V ++A G  +T A     
Sbjct: 383 TVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYTVASKQDG 440

Query: 436 --------------------------------IVDIMVDRCKSNAI--GGKLFTWGDADK 461
                                           I  I      + A+   G ++ WGD  +
Sbjct: 441 TVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNAR 500

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG     R+L P  V  L     V AS   ++ V     G V+  G    GQLG+   
Sbjct: 501 GQLGDGTTTRRLTPVQVQGLAGVTAVAASDYHLVAVRQD--GTVWAWGVGFWGQLGDGTG 558

Query: 522 KDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
            DRS  V V+G      V  I++GS H   L   G+V+ WG N  GQLG G +    TP 
Sbjct: 559 MDRSTPVQVQGLTG---VTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPV 615

Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSI 609
            V  +      ++  G S T A+    ++
Sbjct: 616 QVPGVTG--AVAIAAGGSHTVALLQDGTV 642



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 157/365 (43%), Gaps = 54/365 (14%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           +  V  ++ G  H+A + + G V+ WG+   G+LG   +     P  V+ L+G  V ++S
Sbjct: 170 LTGVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTG--VIAIS 227

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
             + +T AL + G ++ WG+N+ G   +G+  +   + P ++   L GV  + +A G   
Sbjct: 228 ANDSETVALRQDGTVWAWGNNSSGQ--LGDGTTTVRFTPVQVLG-LTGV--TAIAAGGGF 282

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-VDI 439
              +   G L+ +G  + G LG+G      +P++V+ L G  V ++A    HT A+  D 
Sbjct: 283 AVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTG--VTAIAASGIHTVALRQDG 340

Query: 440 MVDRCKSNAIG--------------------------------------GKLFTWGDADK 461
            +    +N+ G                                      G ++ WGD + 
Sbjct: 341 TLWAWGNNSSGQLGDGTTTVRFTPVQVQGLTGVTAIAAGYLYTVASKQDGTVWAWGDNEW 400

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG     R+L P  V  L     + A  G + TV     G V+  G     QLG    
Sbjct: 401 GQLGDGTTTRRLTPVQVQGLTGVTAIAA--GYLYTVASKQDGTVWAWGDNKRSQLGEGAV 458

Query: 522 KDRSITVVEGKLKE-EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
             R      G+++  E +  I++ +     +   G+V+ WG NA GQLG G +  R TP 
Sbjct: 459 SQRH---TPGEVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPV 515

Query: 581 FVEAL 585
            V+ L
Sbjct: 516 QVQGL 520



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 149/344 (43%), Gaps = 28/344 (8%)

Query: 260 VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
           VM     I+ G  H    +++G V+ WG    G+LG   ++    P  V+ L+G+   +V
Sbjct: 119 VMTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVT--AV 176

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           + G   + AL + G ++TWG N  G   +G+  S     P ++   L GV    ++  + 
Sbjct: 177 AAGRNHSAALGQGGTVWTWGDNLVGQ--LGDGTSTQRLTPVQV-QGLTGVI--AISANDS 231

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            T  +   G ++ +G+ + G LG G       P +V  L G  V ++A G       V +
Sbjct: 232 ETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTG--VTAIAAGG---GFAVAL 286

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
             D        G L+ WG   +G+LG+        P  V  L     + AS   + TV L
Sbjct: 287 RQD--------GTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAIAASG--IHTVAL 336

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
              G ++  G+   GQLG+     R   V V+G      V  I++G  +       G+V+
Sbjct: 337 RQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLTG---VTAIAAGYLYTVASKQDGTVW 393

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            WG N  GQLG G +  R TP  V+ L    V ++  G   T A
Sbjct: 394 AWGDNEWGQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYTVA 435



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 22/222 (9%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
            +  V  I+ G+ H   + ++G V+ WG    G+LG         P  V+ L+G+   +++
Sbjct: 1176 LTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVT--TIA 1233

Query: 321  CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
             G F T A+ + G  +TWG N  G    G    R+   P ++   L GV  S +A G  H
Sbjct: 1234 AGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRA--TPVQV-QGLTGV--SALAAGYAH 1288

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            T +V   G ++ +G+ +   LG+G+  + S P +VE+L G    S+A G +HT A+    
Sbjct: 1289 TVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTG--AFSLAAGRFHTVAM---- 1342

Query: 441  VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
                   +  G  + WG  + G++G  DG     PT V  +V
Sbjct: 1343 -------SPDGAGWGWGRNNLGQVG--DGTTADRPTPVNVMV 1375


>gi|119571522|gb|EAW51137.1| NIMA (never in mitosis gene a)- related kinase 8, isoform CRA_c
           [Homo sapiens]
          Length = 699

 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G    LG  + + +   ++V+         V+ G  
Sbjct: 309 RGIPRGPVRPAIPPPLSSVYAWGGG----LGTPLRLPMLNTEVVQ---------VAAGRT 355

Query: 325 QTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W     GA     L G           +  +   GV +  VACG++ 
Sbjct: 356 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 415

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  H  A   + 
Sbjct: 416 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA---LS 472

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D GRLG    E    P  V      +  +  CG   ++ LT
Sbjct: 473 TER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILT 524

Query: 501 GLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEFVKGISSGSY 546
             G+    GS    +LG         P    +     S T++    L +E +  I  G+ 
Sbjct: 525 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTA 584

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 585 HSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 641



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 366 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 422

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 423 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 482

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R   SH  P+++     G    +V CG   + I++  GQ    G   F  
Sbjct: 483 GDSGRLGLGTR--ESHSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 539

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 540 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 597

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L        +CG   TV +    +VY+ G    G+
Sbjct: 598 FGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR 657

Query: 516 LG 517
           LG
Sbjct: 658 LG 659



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 154/367 (41%), Gaps = 40/367 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 346 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 405

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 406 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVA 462

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 463 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 516

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 517 -----IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 571

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  
Sbjct: 572 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAM 630

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC--GS 597
           ++ G      + +   VY+WGK A G+LG  D       P  ++      V SV C  G+
Sbjct: 631 VACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGN 690

Query: 598 SITAAIC 604
           ++ A  C
Sbjct: 691 TLLAVRC 697



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 342 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 400

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 401 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 459

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 460 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 498


>gi|323448625|gb|EGB04521.1| hypothetical protein AURANDRAFT_32361 [Aureococcus anophagefferens]
          Length = 299

 Score =  122 bits (307), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 32/319 (10%)

Query: 270 GAKHAALVTKEGEVFCWG---EGKDGRLGHK---VNMDVSCPKLVECLSGINVQSVSCGE 323
           G +H  ++ K G+V+  G    G+ GR G      ++D+   + V  +   N      G 
Sbjct: 1   GNEHTIVLAKSGKVYSCGYNASGQCGRAGQPAILTSLDLLVSEPVSQIHAYN------GC 54

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T  +T+SG + ++G+N  G    G  + R  + P+ +   +   RV  ++C  +HT +
Sbjct: 55  EHTLIVTRSGRLVSFGYNGFGQLGGGGNKRR--YSPQNI-RGMGNTRVLTLSCSYYHTIV 111

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
                + F++G   +G LGHG+L +     EV+SLRG+ + ++ACG +HT A        
Sbjct: 112 ACVENRTFSFGRNNYGQLGHGDLFDKETAHEVKSLRGMLMTTLACGQYHTCA-------- 163

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
               A  G++F  G  D G+LG +D     +        D   +Q +CG   TV L+   
Sbjct: 164 ---GASSGRVFACGRNDHGQLG-LDCAHASISCMFQVHGDVAAMQVTCGYYHTVILSPDR 219

Query: 504 KVYTMGSAVHGQLGNPKAKDRSI---TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +VY+ G   +GQLG    KD      +VV+G   E  ++ +S+G YH  ++ + G ++ +
Sbjct: 220 QVYSFGRNNYGQLGLGNIKDCVFGLKSVVDGASLE--IEIVSAGCYHTVLVGTSGMIHVF 277

Query: 561 GKNANGQLGLGDSQERETP 579
           G+N +GQLG GD  +R +P
Sbjct: 278 GRNNHGQLGTGDLVDRHSP 296



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 16/206 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  +S    H  +   E   F +G    G+LGH    D      V+ L G+ + +++CG+
Sbjct: 99  VLTLSCSYYHTIVACVENRTFSFGRNNYGQLGHGDLFDKETAHEVKSLRGMLMTTLACGQ 158

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + TCA   SG ++  G N+HG   +G     +H     +F     V   +V CG +HT I
Sbjct: 159 YHTCAGASSGRVFACGRNDHGQ--LG--LDCAHASISCMFQVHGDVAAMQVTCGYYHTVI 214

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +S   Q++++G   +G LG GN+++ V   K V     L+++ V+ G +HT  +      
Sbjct: 215 LSPDRQVYSFGRNNYGQLGLGNIKDCVFGLKSVVDGASLEIEIVSAGCYHTVLV------ 268

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVD 468
                   G +  +G  + G+LG  D
Sbjct: 269 -----GTSGMIHVFGRNNHGQLGTGD 289



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 9/152 (5%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++ G  H       G VF  G    G+LG    +  +SC  + +    +    V+CG + 
Sbjct: 154 LACGQYHTCAGASSGRVFACGRNDHGQLGLDCAHASISC--MFQVHGDVAAMQVTCGYYH 211

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG--VRVSKVACGEWHTAI 383
           T  L+   ++Y++G NN+G   +G  +     L       +DG  + +  V+ G +HT +
Sbjct: 212 TVILSPDRQVYSFGRNNYGQLGLGNIKDCVFGLK----SVVDGASLEIEIVSAGCYHTVL 267

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           V TSG +  +G    G LG G+L +   P  +
Sbjct: 268 VGTSGMIHVFGRNNHGQLGTGDLVDRHSPHSI 299



 Score = 40.0 bits (92), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           +S   YH  V       +++G+N  GQLG GD  ++ET   V++LR   + ++ CG   T
Sbjct: 102 LSCSYYHTIVACVENRTFSFGRNNYGQLGHGDLFDKETAHEVKSLRGMLMTTLACGQYHT 161

Query: 601 AA 602
            A
Sbjct: 162 CA 163


>gi|395748770|ref|XP_002827256.2| PREDICTED: serine/threonine-protein kinase Nek8 [Pongo abelii]
          Length = 688

 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G    LG  + + +   ++V+         V+ G  
Sbjct: 292 RGIPRGPVRPAIPPPLSSVYAWGGG----LGTPLRLPMLNTEVVQ---------VAIGRT 338

Query: 325 QTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W     GA     L G           +  +   GV +  VACG++ 
Sbjct: 339 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 398

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  H  A   + 
Sbjct: 399 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA---LS 455

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D GRLG    E    P  V      +  +  CG   ++ LT
Sbjct: 456 TER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILT 507

Query: 501 GLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEFVKGISSGSY 546
             G+    GS    +LG         P    +     S T++    L +E +  I  G+ 
Sbjct: 508 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTA 567

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 568 HSAAVTASGDCYTFGSNQHGQLGTNARRGSRVPCKVQGLEGIKMAMVACGDAFTVAI 624



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 349 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 405

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 406 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 465

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R S  H  P+++     G    +V CG   + I++  GQ    G   F  
Sbjct: 466 GDSGRLGLGTRES--HSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 522

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 523 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 580

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG        +P  V  L        +CG   TV +   G+VY+ G    G+
Sbjct: 581 FGSNQHGQLGTNARRGSRVPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGR 640

Query: 516 LG 517
           LG
Sbjct: 641 LG 642



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 38/356 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  +++G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 329 EVVQVAIGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 388

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 389 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVA 445

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 446 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 499

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 500 -----IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 554

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R    V+G L+   +  
Sbjct: 555 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRGSRVPCKVQG-LEGIKMAM 613

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           ++ G      + + G VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 614 VACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 669



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 247 QVDALLPKLLESAVMLD---VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           QV+  L   L  +  LD   + +I LG  H+A VT  G+ + +G  + G+LG        
Sbjct: 539 QVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRGSR 598

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL- 362
            P  V+ L GI +  V+CG+  T A+   GE+Y+WG    G   +G RR     LPR + 
Sbjct: 599 VPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGR--LG-RRDEDAGLPRPVQ 655

Query: 363 FDTLDGVRVSKVACGEWHTAI 383
            D      V+ V+C   +T +
Sbjct: 656 LDETHPYTVTSVSCCHGNTLL 676



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 325 MLNTEVVQVAIGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 383

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 384 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 442

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 443 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 481


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 159/350 (45%), Gaps = 52/350 (14%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      +S P  ++ L    V+  +CG   T
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G +Y  G NN G   +G+   R  +     F   D ++  +++ G   +A ++ 
Sbjct: 138 LVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIK--QLSAGANTSAALTE 195

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N  NV  P EV    G  +  ++CG +H+A +          
Sbjct: 196 DGKLFMWGDNSEGQIGLKNKSNVCIPHEV--TVGKPISWISCGYYHSAFVT--------- 244

Query: 447 NAIGGKLFTWGDADKGRLG--------HVDGERKL-LPTCVTRLVDFDFVQASCGRMLTV 497
             + G+L+T+G+ + G+LG        H   +R L +P  V        +Q +CG   TV
Sbjct: 245 --VDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKV--------IQVACGGGHTV 294

Query: 498 GLTGLGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
            LT    VY  G    GQLG          PK  +R        +K++ +  IS G  H 
Sbjct: 295 VLTD-KVVYAFGLGQFGQLGLGTFLFETSEPKVIER--------IKDQKISYISCGENHT 345

Query: 549 AVLTSGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
           A++T  G +YT+G   +G+LGLG  +   +  PT         V+ + CG
Sbjct: 346 ALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACG 395



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 51/276 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTAIV+ + +L+ +G   +G LG G+   +S+P  +++L+  KVK  ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 434 AAIVD------------------IMVDRCKSNAIG------------------------G 451
               D                     DR   + IG                        G
Sbjct: 138 LVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAALTEDG 197

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           KLF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTVDGELYTFGEP 255

Query: 512 VHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG P       RS   V G + E+ ++ ++ G  H  VLT    VY +G    GQL
Sbjct: 256 ENGKLGLPNQLLINHRSPQRVLG-IPEKVIQ-VACGGGHTVVLTD-KVVYAFGLGQFGQL 312

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG    E   P  +E ++D+++  + CG + TA +
Sbjct: 313 GLGTFLFETSEPKVIERIKDQKISYISCGENHTALM 348


>gi|403352385|gb|EJY75705.1| hypothetical protein OXYTRI_02905 [Oxytricha trifallax]
          Length = 923

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 175/391 (44%), Gaps = 72/391 (18%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKL 307
           DALLP+ +     +  + IS    H A++T++G++   G    G+LG + N  +++  ++
Sbjct: 187 DALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKLGIESNKTNINKFQI 246

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN--NHGADLVGERRSRSHWLPRKL--- 362
           V  L     + VSCG++ T  L + G +Y +G +      D +   ++ +  +   +   
Sbjct: 247 VPTLQRKRAKQVSCGDYHTLVLIEDGTVYQFGGSLFKDKKDKINRPQNPTQQIAPNVPQP 306

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG----TFGVLGHGNLQNVSQPKEVESL 418
              L G  + ++ CG++H+A +  +G L+T+G G      G  GHG+   +  P++V+ L
Sbjct: 307 VQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYL 366

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG------------- 465
              ++  VACG +HT A+               +L+ +G  + G  G             
Sbjct: 367 SSKRIIKVACGGFHTLALTS-----------ENELYGFGSGNYGECGNGEFMDTSKPKLI 415

Query: 466 -----HVDGERKLLPTCVTRLVDFDFVQ-------------ASCGRMLTVGLTGLGKVYT 507
                H+D ++ +         D +FV              A+ GR   + +T  G++Y+
Sbjct: 416 KFPNDHLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHSLI-ITNKGRLYS 474

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G   +GQLGN         VV+           ++G  H  +LT  G V++ G   +GQ
Sbjct: 475 FGYGTNGQLGN---------VVQ----------CAAGWNHSMILTERGDVFSCGYGGHGQ 515

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSS 598
           LG GD + R   TFV++L ++ +  +  G S
Sbjct: 516 LGHGDKESRTQFTFVQSLGNKNISKIFAGGS 546



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 19/268 (7%)

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            K   ++ +G N  G   +G  +     LPR     + G+    ++    HTA+++  GQ
Sbjct: 164 NKKAYVWAFGKNQEGELALGVYKDA--LLPR-FVTGVKGMTAKWISSSNHHTAMITQDGQ 220

Query: 390 LFTYGDGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +   G    G LG   N  N+++ + V +L+  + K V+CG +HT     ++++      
Sbjct: 221 IVVSGSSLHGKLGIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTL----VLIEDGTVYQ 276

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
            GG LF      K ++       + +    P  V  L   + VQ  CG   +  L G G 
Sbjct: 277 FGGSLFK---DKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGD 333

Query: 505 VYTMGSAV----HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +YT G        GQ G+              L  + +  ++ G +H   LTS   +Y +
Sbjct: 334 LYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIIKVACGGFHTLALTSENELYGF 393

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDR 588
           G    G+ G G+  +   P  ++   D 
Sbjct: 394 GSGNYGECGNGEFMDTSKPKLIKFPNDH 421



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 36/241 (14%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           I +    ++ +G    G L  G  ++   P+ V  ++G+  K ++    HTA I      
Sbjct: 162 IKNKKAYVWAFGKNQEGELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQ---- 217

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGER------KLLPTCVTRLVDFDFVQASCGRMLT 496
                   G++   G +  G+LG ++  +      +++PT   +       Q SCG   T
Sbjct: 218 -------DGQIVVSGSSLHGKLG-IESNKTNINKFQIVPTLQRKRAK----QVSCGDYHT 265

Query: 497 VGLTGLGKVYTMGSAVH----GQLGNPKAKDRSITV-----VEGKLKEEFVKGISSGSYH 547
           + L   G VY  G ++      ++  P+   + I       V+     E V+ I  G +H
Sbjct: 266 LVLIEDGTVYQFGGSLFKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQ-IDCGDFH 324

Query: 548 VAVLTSGGSVYTWGKNA----NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            A L   G +YTWG  A     GQ G G +   E P  V+ L  +++  V CG   T A+
Sbjct: 325 SAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIIKVACGGFHTLAL 384

Query: 604 C 604
            
Sbjct: 385 T 385



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 25/133 (18%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           L E   +LD    + G +H+ ++T +G ++ +G G +G+LG+          +V+C +G 
Sbjct: 447 LKEQPQILD---FAAGGRHSLIITNKGRLYSFGYGTNGQLGN----------VVQCAAGW 493

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N          +  LT+ G++++ G+  HG    G++ SR+ +       +L    +SK+
Sbjct: 494 N---------HSMILTERGDVFSCGYGGHGQLGHGDKESRTQFT---FVQSLGNKNISKI 541

Query: 375 ACGEWHTAIVSTS 387
             G  H+ +V  S
Sbjct: 542 FAGGSHSWVVLDS 554


>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
 gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
           Y-400-fl]
          Length = 790

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 164/366 (44%), Gaps = 27/366 (7%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+++   T VD +    LES V      I+ G  H   +T  G V CWG    G+LG++
Sbjct: 101 DGTMNDRNTPVDVVG---LESGVAA----IAAGGSHTCALTTNGGVKCWGANVSGQLGNE 153

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             +  S P  V  L G  V  ++ G   TCALT  G +  WG N+ G   +G+  +    
Sbjct: 154 TQIPYSAPVDVVEL-GRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQ--LGDGTTNDRN 210

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  +     G  V+ +A GE HT  ++TSG +  +GD   G LG G + +   P +V  
Sbjct: 211 TPVDVAGLESG--VAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAG 268

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    V ++A G  HT A+  +   RC           WG+   G+LG      + +P  
Sbjct: 269 LES-DVAAIAVGWEHTCALTTVGGVRC-----------WGNNSSGQLGDGTMTERNVPVG 316

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           V  L +      + G   T  LT  G V   G+  +GQLGN  A    I V    L    
Sbjct: 317 VIGL-ESGVTAITAGGGHTCALTTGGGVKCWGNNFYGQLGNVTAHQPGIPVDVAGLGIGV 375

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V  I++G  H   LT+ G V  WG N + QLG G +  R TP  V  L +  V ++  G 
Sbjct: 376 VA-IAAGGAHTCALTTSGGVKCWGYNYDVQLGDGTTTARSTPVDVSGL-ESDVVTITAGG 433

Query: 598 SITAAI 603
           + T A+
Sbjct: 434 AHTCAL 439



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 150/341 (43%), Gaps = 20/341 (5%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           ++  I+ G  H   +T  G V CWG+   G+LG     D + P  V  L    V +++ G
Sbjct: 68  NITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDVVGLES-GVAAIAAG 126

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              TCALT +G +  WG N  G   +G      +  P  + +   G  V  +  G  HT 
Sbjct: 127 GSHTCALTTNGGVKCWGANVSGQ--LGNETQIPYSAPVDVVEL--GRGVFDITAGWEHTC 182

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            ++T G +  +GD + G LG G   + + P +V  L    V ++A G  HT A+      
Sbjct: 183 ALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLES-GVAAIAAGEGHTCALTTSGGV 241

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
           +C           WGD  +G+LG       + P  V  L + D    + G   T  LT +
Sbjct: 242 KC-----------WGDNLEGQLGGGTIYSHITPVDVAGL-ESDVAAIAVGWEHTCALTTV 289

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G V   G+   GQLG+    +R++ V    L E  V  I++G  H   LT+GG V  WG 
Sbjct: 290 GGVRCWGNNSSGQLGDGTMTERNVPVGVIGL-ESGVTAITAGGGHTCALTTGGGVKCWGN 348

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N  GQLG   + +   P  V  L    V ++  G + T A+
Sbjct: 349 NFYGQLGNVTAHQPGIPVDVAGL-GIGVVAIAAGGAHTCAL 388



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 166/382 (43%), Gaps = 46/382 (12%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+ +   T VD      LES    DV  I+ G  H   +T  G V CWG   + +LG  
Sbjct: 407 DGTTTARSTPVDV---SGLES----DVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDG 459

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
             +D + P  V  L G  V +++ G   TCALT S  +  WG N +G   +G      + 
Sbjct: 460 TMIDRNTPVDVIGL-GSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQ--LGHGTMNFYG 516

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  +   L+G  V+ +A G WHT  + T G +  +G    G LG G   + S P +V  
Sbjct: 517 TPVDVIG-LNG-DVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSDRSIPVDVSG 574

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L G  V ++  G +HT A+      +C           WG     +LG++   +  +P  
Sbjct: 575 L-GSGVAAITAGLFHTCALTTSGGVKC-----------WGSNSSWQLGNITVGQPYIPVD 622

Query: 478 VTRLVDFDFVQASCGRMLTVGL-------TGLGKVYTMGSAVHGQLGNPKAKDRSI--TV 528
           V  L  +  V A     +T GL       TG  +V   G    GQLG+     R    TV
Sbjct: 623 VFGL--WSGVTA-----ITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLRRFPQTV 675

Query: 529 VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR-D 587
           +  +  E     I++G  H   LT  G +  WG N  GQLG G   +R TP  V+ +R +
Sbjct: 676 IGLEGSE---TAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTP--VDVIRLE 730

Query: 588 RQVESVVCGSSITAAICLHKSI 609
             V+++  G   T A+   K +
Sbjct: 731 SNVDAIAAGFFHTCALTTDKGV 752



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 152/368 (41%), Gaps = 36/368 (9%)

Query: 221 VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           V  WG   EG LGG       G++  + T VD      LES    DV  I++G +H   +
Sbjct: 241 VKCWGDNLEGQLGG-------GTIYSHITPVDV---AGLES----DVAAIAVGWEHTCAL 286

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T  G V CWG    G+LG     + + P  V  L    V +++ G   TCALT  G +  
Sbjct: 287 TTVGGVRCWGNNSSGQLGDGTMTERNVPVGVIGLES-GVTAITAGGGHTCALTTGGGVKC 345

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG+N +G   +G   +    +P  +     G+ V  +A G  HT  ++TSG +  +G   
Sbjct: 346 WGNNFYGQ--LGNVTAHQPGIPVDVAGL--GIGVVAIAAGGAHTCALTTSGGVKCWGYNY 401

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
              LG G     S P +V  L    V ++  G  HT A+      +C           WG
Sbjct: 402 DVQLGDGTTTARSTPVDVSGLES-DVVTITAGGAHTCALTTSGGVKC-----------WG 449

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                +LG      +  P  V  L        + G   T  LT    V   GS ++GQLG
Sbjct: 450 RNFNFQLGDGTMIDRNTPVDVIGL-GSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLG 508

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
           +         V    L  + V  I++G +H   L + G V  WG N +GQLG G   +R 
Sbjct: 509 HGTMNFYGTPVDVIGLNGD-VTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSDRS 567

Query: 578 TPTFVEAL 585
            P  V  L
Sbjct: 568 IPVDVSGL 575


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 134/259 (51%), Gaps = 23/259 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           ++CG   T  + ++ ++Y++G    G  L+G        +P++L   L   +  +VACG 
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTG--LLGNEHLEDVKIPQQL--NLKQ-KFVQVACGA 80

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            H+  ++ SG +F++G    G LGHGN  +  +PKEV     +  + + CG  H+A    
Sbjct: 81  THSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-NDIIAEYIDCGDQHSA---- 135

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
             V + K      +L+TWG+    RLGH     +L+P  V  L D+     SCG   T+ 
Sbjct: 136 -FVSKNK------ELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLI 188

Query: 499 LTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG-----ISSGSYHVAVLT 552
           +TG G VY  G  ++G+LG +   K +++    G + ++F K      +++GS H   L+
Sbjct: 189 VTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALS 248

Query: 553 SGGSVYTWGKNANGQLGLG 571
           + G ++TWG + +G LG+G
Sbjct: 249 TNGQIFTWGSSKSGNLGIG 267



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 20/236 (8%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +ACG  HT I+  + QL+++G G  G+LG+ +L++V  P+++   +  K   VACG  H+
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQ--KFVQVACGATHS 83

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
            A+            I G +F+WG   +G+LGH +    L P  V +  D       CG 
Sbjct: 84  LAL-----------TISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-NDIIAEYIDCGD 131

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             +  ++   ++YT G+  + +LG+    D  I      L++ +V  +S G  H  ++T 
Sbjct: 132 QHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTG 191

Query: 554 GGSVYTWGKNANGQLGLG-DSQERETPTFVEAL-----RDRQVESVVCGSSITAAI 603
            G VY WG    G+LG+  D + +  PT V  +     +++    V  GS  + A+
Sbjct: 192 EGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL 247



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 21/205 (10%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ GA H+  +T  G +F WG+   G+LGH    D   PK V   + I  + + CG+  +
Sbjct: 76  VACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGDQHS 134

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             ++K+ E+YTWG+  +    +G   +    +P+K+   L+   V+ V+CG  HT IV+ 
Sbjct: 135 AFVSKNKELYTWGNGQYYR--LGHGVTTDELIPKKVV-VLEDYYVTHVSCGMNHTLIVTG 191

Query: 387 SGQLFTYGDGTFGVLGHG-NLQNVSQPKEV----ESLRGLKV-KSVACGPWHTAAIVDIM 440
            G ++ +GDG +G LG   + +  + P  V    +  R  K+   VA G  H+ A+    
Sbjct: 192 EGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL---- 247

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLG 465
                  +  G++FTWG +  G LG
Sbjct: 248 -------STNGQIFTWGSSKSGNLG 265



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 22/204 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK-LLESAVMLDVQNISLGAKHAALVTK 279
           +  WG+  L G +G            Q D L PK ++++ ++ +   I  G +H+A V+K
Sbjct: 92  IFSWGKN-LRGQLGHG---------NQNDCLKPKEVIQNDIIAEY--IDCGDQHSAFVSK 139

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
             E++ WG G+  RLGH V  D   PK V  L    V  VSCG   T  +T  G +Y WG
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWG 199

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK----VACGEWHTAIVSTSGQLFTYGD 395
              +G   V E   ++  LP ++       R +K    VA G  H+  +ST+GQ+FT+G 
Sbjct: 200 DGMYGKLGVSE-DCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGS 258

Query: 396 GTFGVLGHGNLQNV----SQPKEV 415
              G LG G  +++    +QP+++
Sbjct: 259 SKSGNLGIGYNKDIQDYYTQPQKI 282



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 43/305 (14%)

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           D + P  ++      ++ +SC      A+++ G+ Y WG N +    VG      +++P+
Sbjct: 415 DFNRPFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVG-YSCNYNYIPQ 473

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH--GNLQNVSQPKEVESL 418
           KL   L+   +   AC +  +A+++  G+++T+G    GVLGH   N   V +PK V  +
Sbjct: 474 KLQGILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDI 533

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG------------- 465
              ++  +ACGP    +I          +A   +L+ WG+   G+LG             
Sbjct: 534 P--QMIYIACGPQGMVSI----------SAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEY 581

Query: 466 HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN----PKA 521
             D   K       +  +        G   +V +   GK+Y+ G  ++    N      A
Sbjct: 582 DEDKNGKQQNNEQIKPEEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDA 641

Query: 522 K---DRSITVVEGKLKEEFVKGISSGSYHVAVLT--------SGGSVYTWGKNANGQLGL 570
           K   D+ I +   +L+ +    +S   YH   L+        +   VY WG    G L  
Sbjct: 642 KGIDDQFILIRTNELQNQQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIF 701

Query: 571 GDSQE 575
            +SQ+
Sbjct: 702 ENSQD 706



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 169/404 (41%), Gaps = 98/404 (24%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG--HKVNMDVSCPKLVECLSGINVQSVSC 321
           ++ IS    HA  ++++G+ + WG+    +LG  +  N +    KL   L    +   +C
Sbjct: 430 IRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSAC 489

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-KLFDTLDGVRVSKVACG-EW 379
            +  +  LT  GE++T+G ++ G  ++G +    + +P  K+ +  D  ++  +ACG + 
Sbjct: 490 SDKFSALLTDKGEVWTFGTSDCG--VLGHQEKNYYVVPEPKMVN--DIPQMIYIACGPQG 545

Query: 380 HTAIVSTSGQLFTYGDGTFGVLG-----------------HGNLQNVSQ--PKEVESLRG 420
             +I +   QL+ +G+  +G LG                 +G  QN  Q  P+EV+    
Sbjct: 546 MVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQ---- 601

Query: 421 LKVKSVACGPWHTAAIVDI-MVDRCKSNAIGGK--LFTWGDADKGRLGHVDGERKLLPTC 477
             +KSV  G +H+ AI +   +  C      G+  +F   DA KG    +D +  L+ T 
Sbjct: 602 --IKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDA-KG----IDDQFILIRT- 653

Query: 478 VTRLVDFDFVQASCGRMLTVGLT--------GLGKVYTMGSAVHGQLGNPKAKD------ 523
              L +  F+Q SC    T+ L+            VY  G    G L    ++D      
Sbjct: 654 -NELQNQQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQDIVKYYQ 712

Query: 524 -------------------------RSITVVEG--------KLKEEF----VKGISSGSY 546
                                     +I++++         ++  EF    +K +S+G +
Sbjct: 713 QLKQKPQKSQDLNKYISQKQILLPPTNISLIQKFILTNPDREIINEFYKKSIKYVSAGIF 772

Query: 547 HVAVLTSGGSVYTWGKNANGQLGL----GDSQERETPTFVEALR 586
           H   + S G  + WG   NG+LGL     +S+ +  PT+V  ++
Sbjct: 773 HNIAIGSDGKCFVWGSFQNGKLGLVVNKQNSKTQNCPTYVPIIQ 816



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVK 539
            L D + +  +CG   T+ +    ++Y+ G    G LGN   +D  I   +  LK++FV+
Sbjct: 17  ELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIP-QQLNLKQKFVQ 75

Query: 540 GISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSI 599
            ++ G+ H   LT  G +++WGKN  GQLG G+  +   P  V    D   E + CG   
Sbjct: 76  -VACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGDQH 133

Query: 600 TAAICLHKSI 609
           +A +  +K +
Sbjct: 134 SAFVSKNKEL 143


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 148/331 (44%), Gaps = 19/331 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P    SA +L    +S G  H+ ++T +  V+ WG+  +G+LG         P   + L 
Sbjct: 61  PLYPASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP 120

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
             +V  VS GE  + ALT  G ++ WG N+ G   +G+  +     P ++        + 
Sbjct: 121 --SVAQVSAGESHSLALTDDGRVFAWGLNSSGQ--LGDGTTADSRTPVQVQGLATDSTIK 176

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            VA G  H+  +++ G++F +G  + G LG+ +  + S P +V+ L    V +VA G  H
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA-NVTAVAAGGNH 235

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQASC 491
           + A+              G+++ WG    G+LG         P  V  L      V  S 
Sbjct: 236 SLALTS-----------DGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSA 284

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           G+  ++ L   G VY  G   +GQLGN       + V    L    V  +S+G      L
Sbjct: 285 GKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGLAN--VTAVSAGGSDSLAL 342

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           TS G VY WG N++GQLG G +  R TP  V
Sbjct: 343 TSDGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 21/289 (7%)

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +VS G   +  LT    ++ WG N +G    G    R    P +   +     V++V+ G
Sbjct: 74  AVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS-----VAQVSAG 128

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLKVKSVACGPWHTAAI 436
           E H+  ++  G++F +G  + G LG G   +   P +V+ L     +K VA G  H+ A+
Sbjct: 129 ESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLAL 188

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                         G++F WG    G+LG+       +P  V  L   +    + G   +
Sbjct: 189 TS-----------DGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNHS 236

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGG 555
           + LT  G++Y  G    GQLG+    + S  V V G         +S+G  H   L   G
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           +VY WG N+ GQLG G +   E P  V  L +  V +V  G S + A+ 
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALT 343



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 15/215 (6%)

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           + V+ G  H+ ++++   ++ +GD T G LG G       P   + L    V  V+ G  
Sbjct: 73  AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGES 130

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV-DFDFVQAS 490
           H+ A+ D            G++F WG    G+LG         P  V  L  D      +
Sbjct: 131 HSLALTD-----------DGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVA 179

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            G   ++ LT  G+V+  G    GQLGN    D SI V    L    V  +++G  H   
Sbjct: 180 AGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPAN-VTAVAAGGNHSLA 238

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
           LTS G +Y WG N++GQLG G +    TP  V  L
Sbjct: 239 LTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGL 273


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+ +++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL +
Sbjct: 315 ------GPSDTSK---PTHPEALTE 330



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 37/318 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+ I +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDAHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HG-----QLGNPKAKDRSITVVEGKLKEEF- 537
            Q  CG   T     L  V+T G  V   HG     +  +P+A   +  +      E+F 
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFV 344

Query: 538 ---VKGISSGSYHVAVLT 552
              VK I +G+Y   V T
Sbjct: 345 DVQVKHIFAGTYANFVTT 362



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--ADSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L  +K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 167/376 (44%), Gaps = 29/376 (7%)

Query: 241 VSQNKTQVDALLPKLLESAVMLDVQN---ISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           V+ N T ++  LP  +  A +   Q+   I+ G  +   +T    V CWG  + G+LG  
Sbjct: 32  VALNPTNLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDG 91

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA---DLVGERRSR 354
             +  + P  V  LS   V +++ G   TCALT SG +  WG+N  G     +  +RR+ 
Sbjct: 92  TTIQRNTPVAVNGLS-SGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRT- 149

Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
               P ++     G  V+ +A GE+HT  ++T G +  +G   +G LG G     S P +
Sbjct: 150 ----PVQVAGLSSG--VAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQ 203

Query: 415 VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
           V  L    V ++  G  HT A+             GG +  WG    G+LG     ++  
Sbjct: 204 VAGLS-SGVTAITAGGSHTCALT-----------TGGAVTCWGRNGNGQLGDGTTTQRST 251

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLK 534
           P  V  L   +    + G + T  LT  G V   G+   GQLG+    +RS T V+    
Sbjct: 252 PVNVLGL-SSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERS-TPVDVVGL 309

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
              V  I++G+ H   +T+GG V  WG N   QLG G + ++ TP  V  L  R   ++ 
Sbjct: 310 SSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSR-AAAIA 368

Query: 595 CGSSITAAICLHKSIS 610
            G   T A+     +S
Sbjct: 369 AGDGHTCAMTTGGGVS 384



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 166/390 (42%), Gaps = 31/390 (7%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG    G  +G   DG+  Q  T V       L S V+     I+ G  H   +T  
Sbjct: 77  VICWGNNEFG-QLG---DGTTIQRNTPVAV---NGLSSGVVA----IAAGYAHTCALTTS 125

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V CWG  + G+LG+ + +    P  V  LS   V +++ GE+ TCALT  G +  WG 
Sbjct: 126 GGVSCWGNNESGQLGNGITIQRRTPVQVAGLS-SGVAAIAAGEYHTCALTTDGAVTCWGS 184

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N +G    G    RS   P ++     GV  + +  G  HT  ++T G +  +G    G 
Sbjct: 185 NGYGQLGDGTTTQRS--TPVQVAGLSSGV--TAITAGGSHTCALTTGGAVTCWGRNGNGQ 240

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G     S P  V  L   +V ++  G  +T A+             GG +  WG   
Sbjct: 241 LGDGTTTQRSTPVNVLGLS-SEVAAITAGDVYTCALT-----------TGGGVTCWGANW 288

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG    + +  P  V  L        + G   T  +T  G V   G   + QLG+  
Sbjct: 289 SGQLGDGTTDERSTPVDVVGL-SSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGT 347

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
              +S  VV   L       I++G  H   +T+GG V  WG+N +GQLG G + +R TP 
Sbjct: 348 TTQQSTPVVVNGLSSRAAA-IAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPM 406

Query: 581 FVEALRDRQVESVVCGSSITAAICLHKSIS 610
            VE L    V  +  G S T A+     ++
Sbjct: 407 QVEGLSSG-VADITAGDSHTCALSTEGGVT 435



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 157/349 (44%), Gaps = 28/349 (8%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+  Q  T V     + L S V+     I+ G  H   ++ EG V CWG    G+LG+ 
Sbjct: 447 DGTTIQRSTPVQV---EGLSSGVVA----ITAGDSHTCALSTEGGVTCWGGNGSGQLGNG 499

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
                S P  VE LS   V +++ G+  TCALT  G +  WG N +G   +G+  +    
Sbjct: 500 TTTQRSTPVQVEGLS-SGVMAITAGDSHTCALTTGGGVTCWGGNWYGQ--LGDGTTTQRN 556

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           +P  +     GV  + +A G  HT  +ST G +  +G  T+  LG G   N + P +VE 
Sbjct: 557 MPVNVVGLSSGV--AAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEG 614

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    V ++A G  HT A++             G++  WG    G+LG     +++ P  
Sbjct: 615 LS-SGVAAIAAGYAHTCALI-----------TSGEVTCWGWNWYGQLGDGTTTQRMTPVV 662

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEE 536
           V  L   +      G   T  L+  G V   G   + QLGN     RSI + V+G     
Sbjct: 663 VNGL-SSEVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPMDVDGL--SS 719

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V  +++G  H   L++GG V  WG +  GQLG+G    R TP  V  L
Sbjct: 720 GVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTVL 768



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+ +Q  T V         + +   V  I+ G  H   +T  G V CWG   +G+LG  
Sbjct: 192 DGTTTQRSTPVQV-------AGLSSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDG 244

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
                S P  V  LS   V +++ G+  TCALT  G +  WG N  G    G    RS  
Sbjct: 245 TTTQRSTPVNVLGLS-SEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERS-- 301

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  +     GV  + +A G  HT  ++T G +  +G   +  LG G     S P  V  
Sbjct: 302 TPVDVVGLSSGV--TAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNG 359

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L   +  ++A G  HT A+             GG +  WG    G+LG     ++  P  
Sbjct: 360 LS-SRAAAIAAGDGHTCAMT-----------TGGGVSCWGRNWSGQLGDGTTTQRRTPMQ 407

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEE 536
           V  L        + G   T  L+  G V   G+   GQLG+     RS  V VEG L   
Sbjct: 408 VEGL-SSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEG-LSSG 465

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  I++G  H   L++ G V  WG N +GQLG G + +R TP  VE L    V ++  G
Sbjct: 466 VVA-ITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSG-VMAITAG 523

Query: 597 SSITAAICLHKSIS 610
            S T A+     ++
Sbjct: 524 DSHTCALTTGGGVT 537



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 160/374 (42%), Gaps = 29/374 (7%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+ +Q  T V+ L        +  +V  I+ G  +   +T  G V CWG    G+LG  
Sbjct: 243 DGTTTQRSTPVNVL-------GLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDG 295

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
              + S P  V  LS   V +++ G   TCA+T  G +  WG N +    +G+  +    
Sbjct: 296 TTDERSTPVDVVGLS-SGVTAIAAGNDHTCAITTGGGVSCWGVNQY--SQLGDGTTTQQS 352

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P  + + L   R + +A G+ HT  ++T G +  +G    G LG G       P +VE 
Sbjct: 353 TP-VVVNGLS-SRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEG 410

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    V  +  G  HT A+           +  G +  WG+ + G+LG     ++  P  
Sbjct: 411 LS-SGVADITAGDSHTCAL-----------STEGGVTCWGNNESGQLGDGTTIQRSTPVQ 458

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEE 536
           V  L     V  + G   T  L+  G V   G    GQLGN     RS  V VEG     
Sbjct: 459 VEGL-SSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGL--SS 515

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  I++G  H   LT+GG V  WG N  GQLG G + +R  P  V  L    V ++  G
Sbjct: 516 GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSG-VAAIAAG 574

Query: 597 SSITAAICLHKSIS 610
            S T A+     ++
Sbjct: 575 GSHTCALSTEGGVT 588



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 158/374 (42%), Gaps = 29/374 (7%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG+ +Q  T V  ++  L   A       I+ G  H   +T  G V CWG    G+LG  
Sbjct: 345 DGTTTQQSTPV--VVNGLSSRAAA-----IAAGDGHTCAMTTGGGVSCWGRNWSGQLGDG 397

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
                  P  VE LS   V  ++ G+  TCAL+  G +  WG+N  G    G    RS  
Sbjct: 398 TTTQRRTPMQVEGLS-SGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRS-- 454

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            P ++     GV    +  G+ HT  +ST G +  +G    G LG+G     S P +VE 
Sbjct: 455 TPVQVEGLSSGVV--AITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEG 512

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    V ++  G  HT A+             GG +  WG    G+LG     ++ +P  
Sbjct: 513 LS-SGVMAITAGDSHTCALT-----------TGGGVTCWGGNWYGQLGDGTTTQRNMPVN 560

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEE 536
           V  L        + G   T  L+  G V   G   + QLG+    + +  V VEG     
Sbjct: 561 VVGL-SSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGL--SS 617

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            V  I++G  H   L + G V  WG N  GQLG G + +R TP  V  L   +V ++V G
Sbjct: 618 GVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS-SEVAAIVAG 676

Query: 597 SSITAAICLHKSIS 610
            + T A+     ++
Sbjct: 677 YAHTCALSTGGGVT 690


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G +H A+VT  G+++ +G    G+LG      V  P  V+ L     +   CG   
Sbjct: 43  HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNH 102

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G N+ G   +G+   R+ +     F   +  ++ ++A G + +A V+
Sbjct: 103 TLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFF--TNQHKIKQLAAGSYTSAAVT 160

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             GQLF +GD + G +G  +   VS P +V+   G  V S++CG +H+A I         
Sbjct: 161 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYYHSAFITG------- 211

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G+L+T+G+ + G+LG +  + K   +P  V  +++    + +CG   TV LT  G
Sbjct: 212 ----DGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG 266

Query: 504 KVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VYT G   +GQLG+     + S+      L+   +  ++ G  H AV+   G ++T+G 
Sbjct: 267 -VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGD 325

Query: 563 NANGQLGLGD 572
             +G+LGLG+
Sbjct: 326 GRHGKLGLGE 335



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 140/321 (43%), Gaps = 68/321 (21%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G +N   ++           P K +   D  +   ++CG+ HTA+V+ +G+L+
Sbjct: 15  SGAVFTFGKSNFAENI-----------PSKFWFKND--KPVHISCGDEHTAVVTGNGKLY 61

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA---------------- 435
            +G   +G LG G+   V +P  V++L+  K K   CG  HT                  
Sbjct: 62  MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 121

Query: 436 --------------IVDIMVDRCKSNAIG------------GKLFTWGDADKGRLGHVDG 469
                         ++    ++ K   +             G+LF WGD  +G++G  D 
Sbjct: 122 QLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLAD- 180

Query: 470 ERKLLPTCVTRLVDFDFVQA----SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS 525
                 TCV+     D  +     SCG   +  +TG G++YT G   +G+LG    + ++
Sbjct: 181 -----KTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKN 235

Query: 526 ITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET-PTFVE 583
             V +  L   E V  ++ G  H  VLT  G VYT+G    GQLG G    + + P  V+
Sbjct: 236 SRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVK 294

Query: 584 ALRDRQVESVVCGSSITAAIC 604
            LR  ++ +V CG S TA I 
Sbjct: 295 HLRSHKIHNVTCGESHTAVIA 315



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 28/220 (12%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           + +WG+   G  IG A D +      QVD   P          V +IS G  H+A +T +
Sbjct: 165 LFVWGDNSEG-QIGLA-DKTCVSVPCQVDVGKP----------VSSISCGYYHSAFITGD 212

Query: 281 GEVFCWGEGKDGRLG----HKVNMDVSCPKLVECLSGI--NVQSVSCGEFQTCALTKSGE 334
           GE++ +GE ++G+LG       N  V  P L     GI   V  V+CG   T  LT++G 
Sbjct: 213 GELYTFGEPENGKLGLLPEQLKNSRVPQPVL-----GIMEKVNKVACGGEHTVVLTETG- 266

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +YT+G   +G    G    ++  +P+ +   L   ++  V CGE HTA+++ +G +FT+G
Sbjct: 267 VYTFGLGQYGQLGHGTLLFKTS-VPKSV-KHLRSHKIHNVTCGESHTAVIAENGLMFTFG 324

Query: 395 DGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
           DG  G LG G  N  N   P    +     V  VACG  H
Sbjct: 325 DGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 364



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 11/146 (7%)

Query: 250 ALLPKLLESA--------VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM- 300
            LLP+ L+++        +M  V  ++ G +H  ++T+ G V+ +G G+ G+LGH   + 
Sbjct: 227 GLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 285

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
             S PK V+ L    + +V+CGE  T  + ++G ++T+G   HG   +GE    + + P 
Sbjct: 286 KTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDP- 344

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVST 386
            L        V  VACG  H  + +T
Sbjct: 345 ALCSNFLSFTVLLVACGGCHMLVFAT 370


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 129/260 (49%), Gaps = 16/260 (6%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCGEFQTCA 328
           G +H   +T  G  + WG    G+LGH+ +   +  PKL+E L    +   S     +  
Sbjct: 424 GCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAV 483

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSG 388
           +T +GE+YT+G N+ G   +G   ++    P +L  +L+   VS VACG +HT I + +G
Sbjct: 484 ITDAGELYTFGMNDCGQ--LGLDHTQHQSTP-QLVKSLEATEVSMVACGLYHTIICTAAG 540

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +LFT G   +G LG  + + +  P  V +L    V  VACG +H+  +           +
Sbjct: 541 ELFTCGKNDYGQLGLAHNRQIKLPTLV-ALPNEMVSFVACGYYHSVVV-----------S 588

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
            GG+ F++G  D G+LG      + +P  V    +   V+A+CG   TV L+  G+VY  
Sbjct: 589 TGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVF 648

Query: 509 GSAVHGQLGNPKAKDRSITV 528
           G    GQLGN  + D  + V
Sbjct: 649 GRNNKGQLGNRGSADALLPV 668



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 25/314 (7%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSC 321
           D++ +  G +  A++T EG V   G  K G+ G    +  V   + V+ L    V+ ++ 
Sbjct: 362 DIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 421

Query: 322 --GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
             G     ALT +G  Y+WG+N+ G  L  E  +    +P KL ++L   ++   +    
Sbjct: 422 SNGCEHMIALTDTGLAYSWGYNDRG-QLGHENLATKIHVP-KLIESLKDKKLGFASVSYH 479

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           H+A+++ +G+L+T+G    G LG  + Q+ S P+ V+SL   +V  VACG +HT      
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTII---- 535

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT---RLVDFDFVQASCGRMLT 496
               C +    G+LFT G  D G+LG     +  LPT V     +V F     +CG   +
Sbjct: 536 ----CTA---AGELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSF----VACGYYHS 584

Query: 497 VGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           V ++  G+ ++ G   +GQLG   K       VV        V+  + G YH  +L+  G
Sbjct: 585 VVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRA-TCGCYHTVLLSEQG 643

Query: 556 SVYTWGKNANGQLG 569
            VY +G+N  GQLG
Sbjct: 644 QVYVFGRNNKGQLG 657



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 15/225 (6%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           +PKL+ES     +   S+   H+A++T  GE++ +G    G+LG       S P+LV+ L
Sbjct: 459 VPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSL 518

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
               V  V+CG + T   T +GE++T G N++G   +G   +R   LP  +   L    V
Sbjct: 519 EATEVSMVACGLYHTIICTAAGELFTCGKNDYGQ--LGLAHNRQIKLPTLV--ALPNEMV 574

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           S VACG +H+ +VST G+ F++G   +G LG G+  + + P  V      ++    CG +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCY 634

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           HT  + +            G+++ +G  +KG+LG+      LLP 
Sbjct: 635 HTVLLSE-----------QGQVYVFGRNNKGQLGNRGSADALLPV 668



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 163/372 (43%), Gaps = 27/372 (7%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGA-KHAALVTK---EGEVFCWGEGK 290
           G   GS++     V  L+ +   SAV L++    L A K   +  K    GE++  G+  
Sbjct: 278 GLARGSLATMLFVVLWLMKQPPTSAVNLEMSIAKLAALKEQPMYGKCEASGELYSCGQNS 337

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            G LG   +++      V      +++ V  G      LT  G + T G N  G    G 
Sbjct: 338 YGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGH 397

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVAC--GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
              R   L  +    L   RV  +A   G  H   ++ +G  +++G    G LGH NL  
Sbjct: 398 FDERVMML--RPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLAT 455

Query: 409 -VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
            +  PK +ESL+  K+   +    H+A I D            G+L+T+G  D G+LG  
Sbjct: 456 KIHVPKLIESLKDKKLGFASVSYHHSAVITD-----------AGELYTFGMNDCGQLGLD 504

Query: 468 DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI- 526
             + +  P  V  L   +    +CG   T+  T  G+++T G   +GQLG   A +R I 
Sbjct: 505 HTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLG--LAHNRQIK 562

Query: 527 --TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             T+V   L  E V  ++ G YH  V+++GG  +++G+N  GQLG+G    +  P  V  
Sbjct: 563 LPTLV--ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVAL 620

Query: 585 LRDRQVESVVCG 596
             + ++    CG
Sbjct: 621 SSNTRMVRATCG 632


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 21/258 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           I  G  H   +T+EG VF WG G  G LG+    D+  P  ++ +SG+    ++ G + +
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQID-ISGLFFNEIAAGAYHS 362

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVS 385
            AL K+ ++Y WG NN G   +G + ++   LP++L F     ++   + CG+ H+A ++
Sbjct: 363 LALAKNNQVYGWGVNNRGQLGIGNKENQ--LLPKQLTFFDRKKIQCQYLYCGDQHSACIT 420

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
           T+ +L+T+G+G +  LGHG L +  +PK++E L+ + V  VA G  H+  I +       
Sbjct: 421 TNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITN------- 473

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLV----DFDFVQASCGRMLTVGL 499
                G ++ WG +    LG    + K   LP  V  +     D  F Q + G   ++ L
Sbjct: 474 ----EGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSL 529

Query: 500 TGLGKVYTMGSAVHGQLG 517
           +  G +Y  GS  +  LG
Sbjct: 530 SENGHLYVWGSNKNSLLG 547



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 23/260 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           + CG   T ALT+ G ++ WG  + G   +G  R      P ++   + G+  +++A G 
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGSQGC--LGNGRVDDLETPTQI--DISGLFFNEIAAGA 359

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAI 436
           +H+  ++ + Q++ +G    G LG GN +N   PK++     + ++ + + CG  H+A I
Sbjct: 360 YHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACI 419

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                          +L+TWG+ D  RLGH     ++ P  +  L D   +  + G + +
Sbjct: 420 -----------TTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHS 468

Query: 497 VGLTGLGKVYTMGSAVHGQLGNP--KAKDRSITVVEGKLKEEF----VKGISSGSYHVAV 550
           + +T  G VY  GS+    LG P  + KD+++    G + + F       +++G+ H   
Sbjct: 469 LCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLS 528

Query: 551 LTSGGSVYTWGKNANGQLGL 570
           L+  G +Y WG N N  LG+
Sbjct: 529 LSENGHLYVWGSNKNSLLGV 548



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 158/386 (40%), Gaps = 48/386 (12%)

Query: 249 DALLPKLLE--SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
           + LLPK L       +  Q +  G +H+A +T   E++ WG G   RLGH + +D   PK
Sbjct: 389 NQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPK 448

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK---LF 363
            +E L  + V  V+ G   +  +T  G +Y WG +      +  ++ +   LP++   + 
Sbjct: 449 KIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMS 508

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG---HGNLQNVSQPKEVESLRG 420
            +       +VA G  H+  +S +G L+ +G     +LG    G  ++   P++VE    
Sbjct: 509 QSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQ-EHTCVPQKVEQSED 567

Query: 421 LKVKSVACGPWHTAAIVD--IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
           L+   +    +      +  +M D         KL T+              + +L + +
Sbjct: 568 LEKSCIEKALFFNLKKEEQQMMKDE--------KLVTFEQTTLM--------KTILQSTM 611

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL-GNPKAK--------------- 522
            +  +  +  A+ G   T  +   G +Y  GS   G L  NP  K               
Sbjct: 612 GQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDI 671

Query: 523 --DRSITVVE-GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG-DSQERET 578
             ++S T +E    +   ++ IS    H   +T+ G+ Y WG N   QLGLG  S    T
Sbjct: 672 LFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFT 731

Query: 579 PTFVE-ALRDRQVESVVCGSSITAAI 603
           P  +E A+  + +   + G   +A +
Sbjct: 732 PILLEGAIEQKVIIMAITGEKFSALL 757



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 5/128 (3%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
           +FV+  CG   T+ LT  G V+  G    G LGN +  D   T  +  +   F   I++G
Sbjct: 300 EFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLE-TPTQIDISGLFFNEIAAG 358

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP---TFVEALRDRQVESVVCGSSITA 601
           +YH   L     VY WG N  GQLG+G+ + +  P   TF +  +  Q + + CG   +A
Sbjct: 359 AYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDR-KKIQCQYLYCGDQHSA 417

Query: 602 AICLHKSI 609
            I  +K +
Sbjct: 418 CITTNKEL 425



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 84/324 (25%)

Query: 253  PKLLESAVMLDVQNISL-GAKHAALVTKEGEVFCWGEGKDGRLGHKV-NMDVSC-PKLVE 309
            P LLE A+   V  +++ G K +AL+T +GEV+ +G  + G LGH++ N  V   P+++ 
Sbjct: 732  PILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMIN 791

Query: 310  CL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG------------ADLVGERRSRSH 356
             + S IN   ++C      A+ +  +++ WG+N  G             +L   ++  S 
Sbjct: 792  DIPSMIN---LACSNQTMFAIDQKQQLWAWGNNQFGQLGISLQRDEEEINLQTNKQVSSE 848

Query: 357  WL-----------PRKLF---------DTLDG-VRVSKVACGEWHTAIVSTSGQLFTYGD 395
            +L           P +            ++ G   V +V+CG +HT I++T+ +L T G 
Sbjct: 849  FLEWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTCGL 908

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGL-----------------KVKSVACGPWHTAAIVD 438
              +   GH +     +P++ E  +                   K K VAC  +HT A+  
Sbjct: 909  AKYA--GHQS----QEPEDPEQQQAQQAQFIDAFSSTLEHSSKKFKLVACHEYHTVAV-- 960

Query: 439  IMVDRCKSNAIGGKLFTWGDADKGR-----LGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
                      +   L   G   K R       ++  + K +P     L +  FV  +CG 
Sbjct: 961  ---------TVSSDLVFLGPEGKERGLHEKFANLFRDGKQMP---VELQNIKFV--ACGP 1006

Query: 494  MLTVGLTGLGKVYTMGSAVHGQLG 517
               + L   G+ YT G+ + G+LG
Sbjct: 1007 NHALILNDQGQTYTWGATMGGRLG 1030



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 133/366 (36%), Gaps = 83/366 (22%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVE-CLSGINVQSVSC 321
            ++ IS    H   VT +G  +CWG  +  +LG     D V  P L+E  +    +     
Sbjct: 690  IRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAIT 749

Query: 322  GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL--PRKLFDTLDGVRVSKVACGEW 379
            GE  +  LT  GE++++G +  G  ++G      + +  PR + D    +    +AC   
Sbjct: 750  GEKFSALLTDQGEVWSFGTSEFG--VLGHELKNFYVIMEPRMINDIPSMIN---LACSNQ 804

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQ------NVSQPKEVES--------LRGLK--- 422
                +    QL+ +G+  FG LG  +LQ      N+   K+V S        L+ LK   
Sbjct: 805  TMFAIDQKQQLWAWGNNQFGQLG-ISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPE 863

Query: 423  --------------------VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
                                V  V+CG +HT  I               +L T G A   
Sbjct: 864  RYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCII-----------TTNQELLTCGLAKYA 912

Query: 463  RLGHVDGERKLLPTCVTRLVDF-------------DFVQASCGRMLTVGLTGLGKVYTMG 509
              GH   E +       +   F              F   +C    TV +T    +  +G
Sbjct: 913  --GHQSQEPEDPEQQQAQQAQFIDAFSSTLEHSSKKFKLVACHEYHTVAVTVSSDLVFLG 970

Query: 510  S-----AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
                   +H +  N     + + V     + + +K ++ G  H  +L   G  YTWG   
Sbjct: 971  PEGKERGLHEKFANLFRDGKQMPV-----ELQNIKFVACGPNHALILNDQGQTYTWGATM 1025

Query: 565  NGQLGL 570
             G+LGL
Sbjct: 1026 GGRLGL 1031



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 61/312 (19%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ +SC      A+T  G  Y WG N +    +G  +S   + P  L   ++   +    
Sbjct: 690 IRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLG-FQSDHVFTPILLEGAIEQKVIIMAI 748

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGH--GNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
            GE  +A+++  G+++++G   FGVLGH   N   + +P+ +  +  +   ++AC     
Sbjct: 749 TGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSM--INLACSNQTM 806

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQAS 490
            AI     D+ +      +L+ WG+   G+LG     D E   L T   + V  +F++  
Sbjct: 807 FAI-----DQKQ------QLWAWGNNQFGQLGISLQRDEEEINLQT--NKQVSSEFLEWK 853

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNP-KAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
                        ++ ++ +     +  P K   RSIT       E FV  +S G YH  
Sbjct: 854 ------------AQLKSLKNPERYIVYQPDKPSTRSIT------GEAFVDQVSCGLYHTC 895

Query: 550 VLTSGGSVYTWG--KNANGQLGLGDSQERETP--------TFVEAL------RDRQVESV 593
           ++T+   + T G  K A  Q     SQE E P         F++A         ++ + V
Sbjct: 896 IITTNQELLTCGLAKYAGHQ-----SQEPEDPEQQQAQQAQFIDAFSSTLEHSSKKFKLV 950

Query: 594 VCGSSITAAICL 605
            C    T A+ +
Sbjct: 951 ACHEYHTVAVTV 962



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 8/110 (7%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM--DVSCP 305
           +D + PK +E    + V +++LG  H+  +T EG V+ WG  KD  LG       D + P
Sbjct: 442 LDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLP 501

Query: 306 KLVECLS----GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           + V  +S      +   V+ G   + +L+++G +Y WG N +   L+G R
Sbjct: 502 QRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNS--LLGVR 549



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 26/181 (14%)

Query: 316  VQSVSCGEFQTCALTKSGEIYT------WGHNNHGADLVGERRSRSHWLPRKLFDTLD-- 367
            V  VSCG + TC +T + E+ T       GH +   +   +++++          TL+  
Sbjct: 884  VDQVSCGLYHTCIITTNQELLTCGLAKYAGHQSQEPEDPEQQQAQQAQFIDAFSSTLEHS 943

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
              +   VAC E+HT  V+ S  L   G        H    N+ +  +   +    +K VA
Sbjct: 944  SKKFKLVACHEYHTVAVTVSSDLVFLGPEGKERGLHEKFANLFRDGKQMPVELQNIKFVA 1003

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HV------DGERKLLPTCVTR 480
            CGP H   + D            G+ +TWG    GRLG H+      DG+ KL+    T+
Sbjct: 1004 CGPNHALILND-----------QGQTYTWGATMGGRLGLHINEIGLLDGQEKLIIPYPTK 1052

Query: 481  L 481
            +
Sbjct: 1053 I 1053



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 22/198 (11%)

Query: 408 NVSQPKEVESLRGLKVKS----VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           N ++P   + ++ + +K     + CG  HT A+ +            G +F WG   +G 
Sbjct: 282 NQAEPNNSDFIQPIALKQEFVKIVCGHHHTMALTE-----------EGAVFIWGMGSQGC 330

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           LG+   +    PT +  +    F + + G   ++ L    +VY  G    GQLG    ++
Sbjct: 331 LGNGRVDDLETPTQID-ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKEN 389

Query: 524 ----RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
               + +T  + K  +   + +  G  H A +T+   +YTWG     +LG G   +   P
Sbjct: 390 QLLPKQLTFFDRKKIQ--CQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEP 447

Query: 580 TFVEALRDRQVESVVCGS 597
             +E L+D  V  V  G+
Sbjct: 448 KKIEILQDVYVLDVALGT 465



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 64/341 (18%), Positives = 133/341 (39%), Gaps = 54/341 (15%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSC-PKLVECLSGINVQSVSCGEF 324
           ++ G  H+  +++ G ++ WG  K+  LG ++   + +C P+ VE    +    +    F
Sbjct: 519 VAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVEQSEDLEKSCIEKALF 578

Query: 325 -----QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
                +   + K  ++ T+        ++     +SH    K F TL          G  
Sbjct: 579 FNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMGQSHECKYK-FATL----------GTK 627

Query: 380 HTAIVSTSGQLFTYGDGTFGVL------GHGNLQNVSQ-------------PKEVESLRG 420
           +T  +  +G L+  G    G+L           Q + Q             P E+   R 
Sbjct: 628 NTYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRN 687

Query: 421 LKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVT 479
             ++ ++C   H  A+        K NA     + WG     +LG     +    P  + 
Sbjct: 688 TIIRYISCQYNHCIAVT------AKGNA-----YCWGSNQYNQLGLGFQSDHVFTPILLE 736

Query: 480 RLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF- 537
             ++    + A  G   +  LT  G+V++ G++  G LG+ + K+  + ++E ++  +  
Sbjct: 737 GAIEQKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGH-ELKNFYV-IMEPRMINDIP 794

Query: 538 -VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
            +  ++  +  +  +     ++ WG N  GQLG+   ++ E
Sbjct: 795 SMINLACSNQTMFAIDQKQQLWAWGNNQFGQLGISLQRDEE 835


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 160/336 (47%), Gaps = 24/336 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+ T   ++F +G    G+LG      V+ P  ++ L    V+ V+CG   T
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 125

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             LT  G++Y  G NN G   +G+   RS +     F +    ++ +++ G   +A ++ 
Sbjct: 126 LVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQH--KIKQLSAGSNTSAALTE 183

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ N+  P +V    G  +  ++CG +H+A +          
Sbjct: 184 DGELFMWGDNSEGQIGLQNITNMCVPHQV--TVGKPISWISCGYYHSAFVT--------- 232

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV---DFDFVQASCGRMLTVGLTGLG 503
               G+L+T+G+ + G+LG     + L+   V +LV       +Q +CG   TV LT   
Sbjct: 233 --TEGELYTFGEPESGKLGLP--PKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA 288

Query: 504 KVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            VYT G    GQLG      + S   V   +K++ +  +  G  H A++T  G +YT+G 
Sbjct: 289 -VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITESGLLYTFGD 347

Query: 563 NANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
             +G+LGLG  +   +  PT         V  V CG
Sbjct: 348 GRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACG 383



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 35/273 (12%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G +   ++  P  V    G  +  +SCG 
Sbjct: 168 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV--GKPISWISCGY 225

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  GE+YT+G    G   +  +   +H +P+     + G+  +V +VACG  HT
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQ----LVPGISEKVIQVACGGGHT 281

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G      S+PK +ES++  K+  V CG  HTA I +  
Sbjct: 282 -VVLTEKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITE-- 338

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG--RMLT 496
                     G L+T+GD   G+  LG  +   + LPT  +  + +     +CG   ML 
Sbjct: 339 ---------SGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHMLV 389

Query: 497 VGLTGLGKV----------YTMGSAVHGQLGNP 519
                LG            Y + SA++  + +P
Sbjct: 390 FATPRLGMAEDIESDEIDDYCLPSAIYVPISDP 422



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 22/258 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCG 322
           V+ ++ G  H  ++T  G+V+  G   +G+LG     + S   L+   +  + ++ +S G
Sbjct: 115 VKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAG 174

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              + ALT+ GE++ WG N+ G   +G +   +  +P ++  T+ G  +S ++CG +H+A
Sbjct: 175 SNTSAALTEDGELFMWGDNSEGQ--IGLQNITNMCVPHQV--TV-GKPISWISCGYYHSA 229

Query: 383 IVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            V+T G+L+T+G+   G LG     L N   P+ V  +   KV  VACG  HT  + +  
Sbjct: 230 FVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGI-SEKVIQVACGGGHTVVLTEKA 288

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
           V            +T+G    G+LG          P  +  + D       CG   T  +
Sbjct: 289 V------------YTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 336

Query: 500 TGLGKVYTMGSAVHGQLG 517
           T  G +YT G   HG+LG
Sbjct: 337 TESGLLYTFGDGRHGKLG 354



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 3/119 (2%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           +  SCG   T   TG  K++  GS   GQLG   KA     T ++  LK E VK ++ G 
Sbjct: 64  ISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKA-LKPEKVKFVACGR 122

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAI 603
            H  VLT GG VY  G N  GQLGLGD+ ER     +     + +++ +  GS+ +AA+
Sbjct: 123 NHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAAL 181



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            K++    +S G  H A+ T    ++ +G N  GQLGLG       PT ++AL+  +V+ 
Sbjct: 58  FKKDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKF 117

Query: 593 VVCGSSITAAI 603
           V CG + T  +
Sbjct: 118 VACGRNHTLVL 128


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 154/315 (48%), Gaps = 33/315 (10%)

Query: 241 VSQNKTQVDALLPKLLESAVMLDVQNIS---------LGAK-HAALVTKEGEVFC-WGEG 289
           +S   +   ALL K  ES+ ML    IS         L +K +A+ V   G V C WG G
Sbjct: 17  ISAGASHTVALLSKQFESSEMLARFLISTPLLPESWRLCSKVNASAVNFPGNVVCSWGRG 76

Query: 290 KDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG-EIYTWGHNNHGADLV 348
           +DG+LGH    D   P  +    G ++ SV+CG   T A +KSG ++Y+WG  + G   +
Sbjct: 77  EDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGR--L 134

Query: 349 GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN 408
           G       ++P  +   L G+R+ +++CG+ H   V+   ++ ++G    G LG G  ++
Sbjct: 135 GHGDPSDLFIPHPI-RALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD 193

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
              P+++ +  G+++K VA G  H+ AI +            G L+ WG    G LG  D
Sbjct: 194 SHVPQKILAFEGIRIKMVAAGAEHSVAITE-----------DGDLYGWGWGRYGNLGLGD 242

Query: 469 GERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD---- 523
              +L+P  V   +D D  V  SCG   T+ ++  G +YT G + +GQLG+   +D    
Sbjct: 243 TNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVP 300

Query: 524 RSITVVEGKLKEEFV 538
           R +  +  KL  + +
Sbjct: 301 RKVQALSDKLISQVI 315



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 15/228 (6%)

Query: 192 TRCPKNESHRLVTPTYGSPL-IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    +   +V+ T G+   + R    KDV  WG G    D G    G  S      D 
Sbjct: 93  TKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG----DFGRLGHGDPS------DL 142

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            +P  + +   L ++ IS G  H   VT E +V  WG  ++G LG     D   P+ +  
Sbjct: 143 FIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILA 202

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   + A+T+ G++Y WG   +G   +G+   R   +P K+   +DG +
Sbjct: 203 FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRL--IPEKV--NIDGDK 258

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           +  V+CG  HT  +S+SG L+T+G   +G LGHG+ ++   P++V++L
Sbjct: 259 IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 306



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 17/276 (6%)

Query: 321 CGEFQTCALTKSGEIY-TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           C +    A+   G +  +WG    G   +G   +    LP KL    DG  +  V CG  
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRGEDGQ--LGHGDTDDRLLPTKL-SAFDGQDIVSVTCGAD 111

Query: 380 HTAIVSTSGQ-LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           +T   S SG+ ++++G G FG LGHG+  ++  P  + +L+GL++K ++CG  H      
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCH------ 165

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                C +  +  K+ +WG    G LG    +   +P  +           + G   +V 
Sbjct: 166 -----CLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVA 220

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           +T  G +Y  G   +G LG     DR I        ++ V  +S G  H   ++S G +Y
Sbjct: 221 ITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISISSSGGLY 279

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
           T G +  GQLG GD ++   P  V+AL D+ +  V+
Sbjct: 280 THGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 315



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 11/212 (5%)

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           ++G G  G LGHG+  +   P ++ +  G  + SV CG        D  V R KS   G 
Sbjct: 72  SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG-------ADYTVARSKS---GK 121

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            +++WG  D GRLGH D     +P  +  L      Q SCG    + +T   KV + G  
Sbjct: 122 DVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRN 181

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            +G+LG    KD  +       +   +K +++G+ H   +T  G +Y WG    G LGLG
Sbjct: 182 QNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 241

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           D+ +R  P  V    D+ V  V CG   T +I
Sbjct: 242 DTNDRLIPEKVNIDGDKIV-MVSCGWRHTISI 272



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 1/164 (0%)

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
           V+    N  G  + +WG  + G+LGH D + +LLPT ++     D V  +CG   TV  +
Sbjct: 58  VNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARS 117

Query: 501 GLGK-VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             GK VY+ G    G+LG+    D  I      L+   +K IS G  H   +T    V +
Sbjct: 118 KSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLS 177

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           WG+N NG+LGLG +++   P  + A    +++ V  G+  + AI
Sbjct: 178 WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 221



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS-YHVAVLTSGGSVYTWGKN 563
           V + G    GQLG+    DR +         + +  ++ G+ Y VA   SG  VY+WG  
Sbjct: 70  VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 129

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             G+LG GD  +   P  + AL+  +++ + CG     A+ +   +
Sbjct: 130 DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKV 175


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 156/361 (43%), Gaps = 34/361 (9%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSV 319
           +  V  +S    HAA V + GEVF  G+      GH   +  +  P+LVE L G+  + V
Sbjct: 162 LAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQV 221

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGE 378
           + G   T  LT  G +YT G N HG    G+   R      K+ + L+GV  V ++A G 
Sbjct: 222 AAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRR---TPKIVELLEGVGPVVQIAAGP 278

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAI 436
            +   V+  G + ++G G+   LGHG   N  +P+ ++S R   + V  ++ G  H  A+
Sbjct: 279 SYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                         G ++TWG    G LGH D   K  P  ++ L     VQ    +  T
Sbjct: 339 DS-----------SGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKT 387

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTS 553
             L   G VY  G    G LG P   A D+ +   +   L+  ++  IS+G YH   + +
Sbjct: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXN 447

Query: 554 GGSVYTWGKNANGQLGLGD-------SQERETPTFVEALRD------RQVESVVCGSSIT 600
            G ++ +G N   QLG          ++   +PT  E  RD      RQ     C S + 
Sbjct: 448 KGQIFGFGDNERAQLGHDTLRGCPVPTEIFASPTVAEMERDLRAGFPRQRSDTTCASKLK 507

Query: 601 A 601
           A
Sbjct: 508 A 508



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 148/356 (41%), Gaps = 45/356 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--LSGIN------VQS 318
           I+ G  H  L+ K+  V+  G    G LGH        P+  +C   S IN      V  
Sbjct: 116 ITTGRYHTLLI-KDSSVYSCGSSLCGVLGHG-------PETTQCVAFSRINFPPLAHVAQ 167

Query: 319 VSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
           VS        + +SGE++T G N+     HG D V     R  + PR L + L GV   +
Sbjct: 168 VSASHNHAAFVMQSGEVFTCGDNSSFCCGHG-DTV-----RPIFRPR-LVEALKGVPCKQ 220

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWH 432
           VA G   T  ++  G ++T G  T G LGHG+  +   PK VE L G+  V  +A GP +
Sbjct: 221 VAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSY 280

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDFDFVQAS 490
             A+ D            G + ++G      LGH +   +L P  +   R      V+ S
Sbjct: 281 AMAVTD-----------DGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRIS 329

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            G    V L   G VYT G    G LG+    D++   +   LK      + +      V
Sbjct: 330 AGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFV 389

Query: 551 LTSGGSVYTWGKNANGQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           L   GSVY +G    G LG    G S +   P  +++LR   +  +  G   T A+
Sbjct: 390 LVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 130/276 (47%), Gaps = 19/276 (6%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N+Q ++ G + T  L K   +Y+ G +  G    G   ++     R  F  L    V++V
Sbjct: 113 NMQ-ITTGRYHTL-LIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPL--AHVAQV 168

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +    H A V  SG++FT GD +    GHG+ ++ + +P+ VE+L+G+  K VA G   T
Sbjct: 169 SASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFT 228

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCG 492
             +            + G ++T G    G+LGH D   +  P  V  L      VQ + G
Sbjct: 229 VFLT-----------MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAG 277

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAV 550
               + +T  G V++ GS  +  LG+ +  +  R   +   + K   V  IS+G  HV  
Sbjct: 278 PSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVA 337

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
           L S G VYTWGK   G LG GD  ++ TP  + +L+
Sbjct: 338 LDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLK 373



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 18/271 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E+   +  + ++ G      +T +G V+  G    G+LGH   +D   PK+VE L 
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT-LDGVR 370
           G+  V  ++ G     A+T  G ++++G  ++    +G     +   PR +       + 
Sbjct: 267 GVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC--LGHGEQHNELRPRAIQSFRRKTIH 324

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +++ G+ H   + +SG ++T+G G  G LGHG+  + + P+ + SL+      V    
Sbjct: 325 VVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARK 384

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFV 487
             T  +VD            G ++ +G    G LG  D    ++ + P  +  L      
Sbjct: 385 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYIS 433

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           Q S G   TV +   G+++  G     QLG+
Sbjct: 434 QISTGLYHTVAVXNKGQIFGFGDNERAQLGH 464



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESA--VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q + L P+ ++S     + V  IS G +H   +   G V+ WG+G  G LGH   +D + 
Sbjct: 306 QHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTT 365

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+++  L       V   + +T  L  +G +Y +G    G+    +R +    +   + D
Sbjct: 366 PEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILD 425

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L G  +S+++ G +HT  V   GQ+F +GD     LGH  L+    P E+
Sbjct: 426 SLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+ +++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL +
Sbjct: 315 ------GPSDTSK---PTHPEALTE 330



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 37/318 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+ I +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDAHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HG-----QLGNPKAKDRSITVVEGKLKEEF- 537
            Q  CG   T     L  V+T G  V   HG     +  +P+A   +  +      E+F 
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFV 344

Query: 538 ---VKGISSGSYHVAVLT 552
              VK I +G+Y   V T
Sbjct: 345 DVQVKHIFAGTYANFVTT 362



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--ADSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L  +K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 187/439 (42%), Gaps = 57/439 (12%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G    G +D  +     + D  + K         V+++  G +H   V  +
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--------KVRDVGCGLRHTVFVLDD 52

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V+  G    G+LGH+ +     P+ V  L   N+ +VSCGE  T AL   G++Y WG 
Sbjct: 53  GTVYTCGCNDLGQLGHEKSR--KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGL 110

Query: 341 NNHG-ADLVGERRSRSHWLPRK-LFDTLD-GVRVSK------------VACGEW----HT 381
           ++ G   L+G        +PRK +F  +D  +R+ +              C E     H 
Sbjct: 111 DSDGQLGLLGSEECIR--VPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHL 168

Query: 382 A----IVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           A    +  ++ ++F +G   +G LG G + +  + P+ ++SL G+    VA G  H+  +
Sbjct: 169 AESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVL 228

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                       + G +F WG    G+LG  D   + +P  +  L     V   CG   T
Sbjct: 229 -----------TLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHT 277

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGG 555
             LT  G V+T G+  +GQLG+             +L    V  I+ G  H  A + S G
Sbjct: 278 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 337

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA--AICLHKSISVGD 613
            +Y++G   NGQLG G +  R++P  V+   +    +  C   + +    C+ +  S GD
Sbjct: 338 RIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDLDSEEYFCVKRIFSGGD 395

Query: 614 Q-----SSCSQCRMPFGFR 627
           Q     SS   C  P  FR
Sbjct: 396 QSFSHYSSPQNCGPPDDFR 414


>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
          Length = 922

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 176/397 (44%), Gaps = 84/397 (21%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKL 307
           DALLP+ +     +  + IS    H A++T++G++   G    G+LG + N  +++  ++
Sbjct: 187 DALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKLGIESNKTNINKFQI 246

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW---------- 357
           V  L     + VSCG++ T  L + G +Y +     G  L  +++ + +           
Sbjct: 247 VPTLQRKRAKQVSCGDYHTLVLIEDGTVYQF-----GGSLFKDKKDKINRPQNPTQQIAP 301

Query: 358 -LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG----TFGVLGHGNLQNVSQP 412
            +P+ +   L G  + ++ CG++H+A +  +G L+T+G G      G  GHG+   +  P
Sbjct: 302 NVPQPV-QALYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYP 360

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG------- 465
           ++V+ L   ++  VACG +HT A+               +L+ +G  + G  G       
Sbjct: 361 EKVKYLSSKRIVKVACGGFHTLALTS-----------ENELYGFGSGNYGECGNGEFMDT 409

Query: 466 -----------HVDGERKLLPTCVTRLVDFDFVQ-------------ASCGRMLTVGLTG 501
                      H+D ++ +         D +FV              A+ GR   + +T 
Sbjct: 410 SKPKLIKFPNDHLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHSLI-ITN 468

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G++Y+ G   +GQLGN         VV+           ++G  H  +LT  G V++ G
Sbjct: 469 KGRLYSFGYGTNGQLGN---------VVQ----------CAAGWNHSMILTERGDVFSCG 509

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
              +GQLG GD   R   TFV++L ++ +  +  G S
Sbjct: 510 YGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFAGGS 546



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 19/268 (7%)

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
            K   ++ +G N  G   +G  +     LPR     + G+    ++    HTA+++  GQ
Sbjct: 164 NKKAYVWAFGKNQEGELALGVYKDA--LLPR-FVTGVKGMTAKWISSSNHHTAMITQDGQ 220

Query: 390 LFTYGDGTFGVLG-HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +   G    G LG   N  N+++ + V +L+  + K V+CG +HT     ++++      
Sbjct: 221 IVVSGSSLHGKLGIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTL----VLIEDGTVYQ 276

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
            GG LF      K ++       + +    P  V  L   + VQ  CG   +  L G G 
Sbjct: 277 FGGSLFK---DKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGD 333

Query: 505 VYTMGSAV----HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +YT G        GQ G+              L  + +  ++ G +H   LTS   +Y +
Sbjct: 334 LYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIVKVACGGFHTLALTSENELYGF 393

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDR 588
           G    G+ G G+  +   P  ++   D 
Sbjct: 394 GSGNYGECGNGEFMDTSKPKLIKFPNDH 421



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 36/241 (14%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           I +    ++ +G    G L  G  ++   P+ V  ++G+  K ++    HTA I      
Sbjct: 162 IKNKKAYVWAFGKNQEGELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQ---- 217

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGER------KLLPTCVTRLVDFDFVQASCGRMLT 496
                   G++   G +  G+LG ++  +      +++PT   +       Q SCG   T
Sbjct: 218 -------DGQIVVSGSSLHGKLG-IESNKTNINKFQIVPTLQRKRAK----QVSCGDYHT 265

Query: 497 VGLTGLGKVYTMGSAVH----GQLGNPKAKDRSITV-----VEGKLKEEFVKGISSGSYH 547
           + L   G VY  G ++      ++  P+   + I       V+     E V+ I  G +H
Sbjct: 266 LVLIEDGTVYQFGGSLFKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIVQ-IDCGDFH 324

Query: 548 VAVLTSGGSVYTWGKNA----NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            A L   G +YTWG  A     GQ G G +   E P  V+ L  +++  V CG   T A+
Sbjct: 325 SAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIVKVACGGFHTLAL 384

Query: 604 C 604
            
Sbjct: 385 T 385



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 25/133 (18%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           L E   +LD    + G +H+ ++T +G ++ +G G +G+LG+          +V+C +G 
Sbjct: 447 LKEQPQILD---FAAGGRHSLIITNKGRLYSFGYGTNGQLGN----------VVQCAAGW 493

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N          +  LT+ G++++ G+  HG    G++ SR+ +       +L    +SK+
Sbjct: 494 N---------HSMILTERGDVFSCGYGGHGQLGHGDKDSRTQFT---FVQSLGNKNISKI 541

Query: 375 ACGEWHTAIVSTS 387
             G  H+ +V  S
Sbjct: 542 FAGGSHSWVVLDS 554


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 156/325 (48%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +H+ L+     V   G+   G+LG +       P+ ++ L  + V  VSCG+  + A+
Sbjct: 31  GERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   +GE +  S + P+K+  TL+ +++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    + + P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  V  L +   V  SCG   T  LT  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  GSYH +A + + G V ++G 
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGSYHTLAYVHTTGQVVSFGH 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
                 G  D+ +   PT  EAL +
Sbjct: 315 ------GPSDTSK---PTHPEALTE 330



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 160/326 (49%), Gaps = 37/326 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     ++S  PK +  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+ I +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQASPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV----SQPKEVESLRGLKVKSV 426
           +++VA G  H+  +S  G  F +G  + G L     +NV    ++P  V +L+ L V  +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG-RNVPVQSNKPLSVGALKNLGVVYI 241

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           +CG  HTA +              GK+FT+GD   G+LG+     K  P  V R +D   
Sbjct: 242 SCGDAHTAVLTQ-----------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGLV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAV---HG-----QLGNPKAKDRSITVVEGKLKEEF- 537
            Q  CG   T     L  V+T G  V   HG     +  +P+A   +  +      E+F 
Sbjct: 290 SQIDCGSYHT-----LAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFV 344

Query: 538 ---VKGISSGSYHVAVLTSGGSVYTW 560
              VK I +G+Y   V T   S+  +
Sbjct: 345 DVQVKHIFAGTYANFVTTHQVSIILF 370



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 34/326 (10%)

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           FCWG   D R   +     S         G  +   + GE  +  L  +  + + G N+ 
Sbjct: 3   FCWG--ADSRELQRRRTAGS--------PGAELLQAASGERHSLLLLTNHRVLSCGDNSR 52

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G   +G R ++   LP  +   L+ + V  V+CG+ H+  V   G++F +G G+ G LG 
Sbjct: 53  GQ--LGRRGAQRGELPEPI-QALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI 109

Query: 404 GNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           G  + +S  PK++ +L  +K+  V+CG +H+ A+           +   ++F+WG    G
Sbjct: 110 GEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL-----------SKDSQVFSWGKNSHG 158

Query: 463 RLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG---- 517
           +LG   +   +  P  V  L      Q + G   +  L+  G  +  GS   GQL     
Sbjct: 159 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR 218

Query: 518 -NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
             P   ++ ++V  G LK   V  IS G  H AVLT  G V+T+G N +GQLG   + E+
Sbjct: 219 NVPVQSNKPLSV--GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK 276

Query: 577 ETPTFVEALRDRQVESVVCGSSITAA 602
             P  VE + D  V  + CGS  T A
Sbjct: 277 RGPQLVERI-DGLVSQIDCGSYHTLA 301



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  PK + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K     + P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
                        L  + V  ++CG+ HTA+++  G++FT+GD   G LG+        P
Sbjct: 220 VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG +HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGSYHTLAYV 303



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H  +L +   V + G N+ GQLG   +Q  E P  ++AL    V+ V CG   + 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 602 AICLHK 607
           A+C HK
Sbjct: 89  AVC-HK 93


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 28/338 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++ 
Sbjct: 110 LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQR--KIKQLSAGSNTSAALTE 167

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 168 DGELFMWGDNSEGQIGLKNITNVCVPQQV--TVGKPISWISCGYYHSAFVT--------- 216

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G+L+T+G+ + G+LG     ++LL     P  V  + +   VQ +CG   TV LT 
Sbjct: 217 --TEGELYTFGEPESGKLGL---PKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLTE 270

Query: 502 LGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
              VYT G    GQLG      +  +  V   +K+  +  I  G  H A++T  G +YT+
Sbjct: 271 KA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTF 329

Query: 561 GKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
           G   +G+LGLG  +   + TPT         V+ V CG
Sbjct: 330 GDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 367



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 23/234 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G K   +V  P+ V    G  +  +SCG 
Sbjct: 152 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGY 209

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  GE+YT+G    G   + ++   +H +P+    ++ G+  +V +VACG  HT
Sbjct: 210 YHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQ----SVPGIPEKVVQVACGGGHT 265

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G  L     PK +E ++ LK+ S+ CG  HTA I D+ 
Sbjct: 266 -VVLTEKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDL- 323

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                     G ++T+GD   G+  LG  +   +  PT  +  + F     +CG
Sbjct: 324 ----------GLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 367



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 51/276 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTAIV+ + +L+ +G   +G LG G+   V++P  V++L+  KVK  ACG  HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 434 AA------------------------------IVDIMVDRCKSNAIG------------G 451
                                           ++     + K   +             G
Sbjct: 110 LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDG 169

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 170 ELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGELYTFGEP 227

Query: 512 VHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
             G+LG PK      R    V G + E+ V+ ++ G  H  VLT   +VYT+G    GQL
Sbjct: 228 ESGKLGLPKQLLVNHRMPQSVPG-IPEKVVQ-VACGGGHTVVLTE-KAVYTFGLGQFGQL 284

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG    E   P  +E ++D ++ S+ CG + TA I
Sbjct: 285 GLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 320



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 37/298 (12%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+  LG         S     T V AL P+ ++ A        + G  H  + T+ G+V
Sbjct: 74  WGQLGLGSK-------STVNKPTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKV 118

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           +  G   +G+LG     + +   L+    S   ++ +S G   + ALT+ GE++ WG N+
Sbjct: 119 YASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNS 178

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G +   +  +P+++     G  +S ++CG +H+A V+T G+L+T+G+   G LG
Sbjct: 179 EGQ--IGLKNITNVCVPQQV---TVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLG 233

Query: 403 HGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
                L N   P+ V  +   KV  VACG  HT  + +  V            +T+G   
Sbjct: 234 LPKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLTEKAV------------YTFGLGQ 280

Query: 461 KGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            G+LG         +P  +  + D       CG   T  +T LG +YT G   HG+LG
Sbjct: 281 FGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLG 338



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 3/124 (2%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCG 322
           V  ++ G  H  ++T E  V+ +G G+ G+LG    + +   PK++E +  + + S+ CG
Sbjct: 255 VVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCG 313

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  T  +T  G +YT+G   HG   +G     + + P    + L  + V  VACG  HT 
Sbjct: 314 ENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFI-VQLVACGGCHTL 372

Query: 383 IVST 386
           + +T
Sbjct: 373 VFAT 376



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            K +    +S G  H A++T    +Y +G N  GQLGLG       PT V+AL+  +V+ 
Sbjct: 42  FKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKF 101

Query: 593 VVCGSSIT 600
             CG + T
Sbjct: 102 AACGRNHT 109



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN--MDVSCPKLVE 309
           +PK++E    L + +I  G  H AL+T  G ++ +G+G+ G+LG  +    +   P L  
Sbjct: 295 VPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCS 354

Query: 310 CLSGINVQSVSCG 322
                 VQ V+CG
Sbjct: 355 NFLRFIVQLVACG 367


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 153/335 (45%), Gaps = 31/335 (9%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSC 304
           TQ  A  P  +E      V  +S    H+A V + GEV   G+      GH   +  +  
Sbjct: 149 TQCVAFTP--IEFPFPAQVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFR 206

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           PKLVE L G   + V+ G   T  L++ G  YT G N HG    G+   R      K+ +
Sbjct: 207 PKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRP---APKVVE 263

Query: 365 TLDGV-RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GL 421
            L  +  V ++A G  +   V+  G ++++G G+   LGHG  Q+  QP+ +++ +  G+
Sbjct: 264 FLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +  V+ G  H  A+         SN   G+++TWG    G LGH D   K+ P  +  L
Sbjct: 324 HILRVSAGDEHAVAL--------DSN---GRVYTWGKGYCGALGHGDENDKITPQVLVNL 372

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-------VVEGKLK 534
            +   VQ    +  T  L   G +Y  G    G LG P   DR ++       V+E  LK
Sbjct: 373 KNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFP---DRGVSDKVLRPRVLE-CLK 428

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              V  +S+G YH  V+T GG ++ +G N   QLG
Sbjct: 429 PHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLG 463



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 139/351 (39%), Gaps = 35/351 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--------NVQS 318
           I+ G  H  L+    +V+  G    G L H        P+  +C++           V  
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHG-------PETTQCVAFTPIEFPFPAQVAQ 167

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           VS  +  +  + +SGE+ T G N+  +   G   +       KL + L G    +VA G 
Sbjct: 168 VSATQNHSAFVLQSGEVLTCGDNS--SHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGL 225

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWHTAAIV 437
             T  +S  G  +T G  T G LGHG+  +   PK VE L+ +  V  +A GP +  A+ 
Sbjct: 226 HFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVT 285

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRML 495
                        G ++++G      LGH + + +L P  +          ++ S G   
Sbjct: 286 Q-----------DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEH 334

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
            V L   G+VYT G    G LG+    D+    V   LK      + +      VL  GG
Sbjct: 335 AVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGG 394

Query: 556 SVYTWGKNANGQLGLGD---SQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +Y +G    G LG  D   S +   P  +E L+  +V  V  G   T  +
Sbjct: 395 LLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 16/270 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+E       + ++ G      +++EG  +  G    G+LGH   MD   PK+VE L 
Sbjct: 207 PKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLK 266

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            I  V  ++ G     A+T+ G +Y++G  ++     GE++        + F    G+ +
Sbjct: 267 NIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKR-KGIHI 325

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            +V+ G+ H   + ++G+++T+G G  G LGHG+  +   P+ + +L+      V     
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKR 385

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFVQ 488
            T  +V+           GG L+ +G    G LG  D    ++ L P  +  L      Q
Sbjct: 386 KTFVLVE-----------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQ 434

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            S G   T+ +T  G+++  G     QLG+
Sbjct: 435 VSTGLYHTIVVTQGGRIFGFGDNERAQLGH 464



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 21/249 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDG 292
           G    G +    T +D   PK++E    +  V  I+ G  +   VT++G V+ +G G + 
Sbjct: 241 GSNTHGQLGHGDT-MDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNF 299

Query: 293 RLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            LGH    D   P++++     GI++  VS G+    AL  +G +YTWG    GA  +G 
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGA--LGH 357

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH---GNLQ 407
                   P+ L +  + + V +V   +  T ++   G L+ +G   FG LG    G   
Sbjct: 358 GDENDKITPQVLVNLKNCLAV-QVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD 416

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
            V +P+ +E L+  +V  V+ G +HT  +             GG++F +GD ++ +LGH 
Sbjct: 417 KVLRPRVLECLKPHRVSQVSTGLYHTIVVTQ-----------GGRIFGFGDNERAQLGHN 465

Query: 468 DGERKLLPT 476
                L PT
Sbjct: 466 SLRGCLEPT 474



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+++++     + +  +S G +HA  +   G V+ WG+G  G LGH    D   
Sbjct: 306 QQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKIT 365

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+++  L       V   + +T  L + G +Y +G    G+    +R      L  ++ +
Sbjct: 366 PQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLE 425

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            L   RVS+V+ G +HT +V+  G++F +GD     LGH +L+   +P E+
Sbjct: 426 CLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEPTEI 476


>gi|260792916|ref|XP_002591460.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
 gi|229276665|gb|EEN47471.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
          Length = 689

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 141/337 (41%), Gaps = 40/337 (11%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           VF WG G            ++ P KL    S   V  VS G  Q   +T++G +  W   
Sbjct: 322 VFSWGGG------------ITQPVKLQLPHSDTQVMQVSTGRTQKAGVTRNGRLIMWEVP 369

Query: 342 NHGADLV---GERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
               D         +   ++PR   +   GV + +V+CG+  TA ++  G L T+G GT 
Sbjct: 370 TVATDAAMPGATDHAALQFIPR-FLEGQSGVTIKQVSCGDLFTACLTDRGILMTFGSGTN 428

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LGHG   +V Q K VE+L G +V  V+CG  H  A+ +             ++F+WG 
Sbjct: 429 GCLGHGQTNDVQQAKIVEALLGFEVTLVSCGATHVMAVTN-----------EHEVFSWGR 477

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG- 517
            D GRLG  + E    P  V            CG   ++ LT   ++   GS  H +LG 
Sbjct: 478 GDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSILLTTDNRLLGCGSNRHNKLGL 537

Query: 518 -------NPKAKDRSITVV----EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
                  +P  +   + V        L    +  ++ G+ H A +T  G  YT+G N   
Sbjct: 538 DILPADDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGANNFN 597

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           QLG     +   P  V AL D  +  V CG + T AI
Sbjct: 598 QLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAI 634



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 31/309 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    +  D   A+ G+      Q    +P+ LE    + ++ +S G    A +T  
Sbjct: 363 LIMWEVPTVATD--AAMPGATDHAALQ---FIPRFLEGQSGVTIKQVSCGDLFTACLTDR 417

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    DV   K+VE L G  V  VSCG     A+T   E+++WG 
Sbjct: 418 GILMTFGSGTNGCLGHGQTNDVQQAKIVEALLGFEVTLVSCGATHVMAVTNEHEVFSWGR 477

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            +HG   +G R S S   P  +        V  V CG   + +++T  +L   G      
Sbjct: 478 GDHGRLGLGNRESYSTPQPVPIPSPH---LVKSVHCGVDCSILLTTDNRLLGCGSNRHNK 534

Query: 401 LGHGNL-------QNVSQ-----PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           LG   L       Q + +     P     L   ++ +VA G  H+AAI +          
Sbjct: 535 LGLDILPADDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITE---------- 584

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+ +T+G  +  +LG+    +   P  V  L D       CG   TV +T  G+VYT 
Sbjct: 585 -SGQCYTFGANNFNQLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAITTEGEVYTW 643

Query: 509 GSAVHGQLG 517
           G    G+LG
Sbjct: 644 GKGSRGRLG 652



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 135/315 (42%), Gaps = 15/315 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCW-------GEGKDGRLGHKVNMDVSCPKLVECLSGINV 316
           V  +S G    A VT+ G +  W            G   H     +  P+ +E  SG+ +
Sbjct: 344 VMQVSTGRTQKAGVTRNGRLIMWEVPTVATDAAMPGATDHAALQFI--PRFLEGQSGVTI 401

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           + VSCG+  T  LT  G + T+G   +G    G+          K+ + L G  V+ V+C
Sbjct: 402 KQVSCGDLFTACLTDRGILMTFGSGTNGCLGHGQTNDVQQ---AKIVEALLGFEVTLVSC 458

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G  H   V+   ++F++G G  G LG GN ++ S P+ V       VKSV CG   +  +
Sbjct: 459 GATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSILL 518

Query: 437 V-DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
             D  +  C SN           AD      +D     +P     L+       + G   
Sbjct: 519 TTDNRLLGCGSNRHNKLGLDILPADDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSH 578

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           +  +T  G+ YT G+    QLG  K +KDR   +V   L++  +  +  G      +T+ 
Sbjct: 579 SAAITESGQCYTFGANNFNQLGYQKDSKDRRPQLVPA-LEDVCISMVECGDTFTVAITTE 637

Query: 555 GSVYTWGKNANGQLG 569
           G VYTWGK + G+LG
Sbjct: 638 GEVYTWGKGSRGRLG 652



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 118/270 (43%), Gaps = 24/270 (8%)

Query: 233 IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
            G   +G +   +T  D    K++E+ +  +V  +S GA H   VT E EVF WG G  G
Sbjct: 423 FGSGTNGCLGHGQTN-DVQQAKIVEALLGFEVTLVSCGATHVMAVTNEHEVFSWGRGDHG 481

Query: 293 RLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH---GADLVG 349
           RLG       S P+ V   S   V+SV CG   +  LT    +   G N H   G D++ 
Sbjct: 482 RLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSILLTTDNRLLGCGSNRHNKLGLDILP 541

Query: 350 ERRSRSH-------WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
              S S        ++P      L   R++ VA G  H+A ++ SGQ +T+G   F  LG
Sbjct: 542 ADDSPSQQIDEMCVFVPASSAPLLT-TRIAAVALGTSHSAAITESGQCYTFGANNFNQLG 600

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           +       +P+ V +L  + +  V CG   T AI              G+++TWG   +G
Sbjct: 601 YQKDSKDRRPQLVPALEDVCISMVECGDTFTVAI-----------TTEGEVYTWGKGSRG 649

Query: 463 RLGHVDGERKLL-PTCVTRLVDFDFVQASC 491
           RLG  +   K+  P  +     F  +  SC
Sbjct: 650 RLGRREENTKIPKPVPLLDSEPFQIISISC 679



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 5/158 (3%)

Query: 229 LGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGE 288
           LG DI  A D S SQ   ++   +P      +   +  ++LG  H+A +T+ G+ + +G 
Sbjct: 535 LGLDILPA-DDSPSQQIDEMCVFVPASSAPLLTTRIAAVALGTSHSAAITESGQCYTFGA 593

Query: 289 GKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLV 348
               +LG++ +     P+LV  L  + +  V CG+  T A+T  GE+YTWG  + G   +
Sbjct: 594 NNFNQLGYQKDSKDRRPQLVPALEDVCISMVECGDTFTVAITTEGEVYTWGKGSRGR--L 651

Query: 349 GERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHTAIVS 385
           G R   +    P  L D+ +  ++  ++C   +T + +
Sbjct: 652 GRREENTKIPKPVPLLDS-EPFQIISISCSHGNTLLAT 688


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 167/377 (44%), Gaps = 44/377 (11%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            V+ +   A+HA  +  +G V  WG+   G+LG       + P +V  L+G  V +VS G 
Sbjct: 1108 VRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTG--VVAVSTGA 1165

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
            + + AL   G ++ WG N  G   +G+  + S   P ++       +V  +  G +H   
Sbjct: 1166 WHSLALRSDGTVWAWGANGFGQ--LGDGTTLSRTTPVRVAGLQ---KVVAIGAGGYHALA 1220

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            V + G ++ +G   FG LG G  ++   P  VE L    V SVA G  H+ A+   + D 
Sbjct: 1221 VRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLS--NVTSVAGGDHHSLAL---LAD- 1274

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                   G L  WG+   G+LG   G  +     V + VD   V+   G   T+ L G G
Sbjct: 1275 -------GSLGAWGNNAAGQLGDGTGTTRYSRVWV-KGVD-GVVEVRAGAAHTLALRGDG 1325

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
             V+T G   H QLG      R+  V         V  I +G+ H   +   G+V+ WG+N
Sbjct: 1326 TVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRN 1385

Query: 564  ANGQLGLGDSQERETPTFVEAL-----------------RDRQVESVVCGSSITAAICLH 606
            ++GQLGLGD+  R  P  V+ L                 RD  V S   GSS+  A+ L 
Sbjct: 1386 SHGQLGLGDNANRAEPLRVKELAEVSVVSGGADFSLAMQRDGTVSS--WGSSLHGALGLG 1443

Query: 607  KSISVGDQSSCSQCRMP 623
               + G +SS  Q  +P
Sbjct: 1444 ---TAGQRSSPGQVALP 1457



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 152/329 (46%), Gaps = 30/329 (9%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           V  +G V  WG    G+LG         P  V  +SGI+  +V+ G +   AL K G ++
Sbjct: 215 VMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISGIS--AVTAGTYHAVALGKDGGVW 272

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHTAIVSTSGQLFTYGD 395
           TWG N+ G      +     W  R +   + G+ RV  VA  +  +  +  +G +  +G 
Sbjct: 273 TWGANSSG------QLGDGAWSDRAVPARVPGLERVKAVASMDASSLALLEAGSVLAWGA 326

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
              G LG     + + P EV  LR   V +V  G  H  A+      R       G L+ 
Sbjct: 327 NGSGQLGDSGTDDRATPGEVPGLR--SVAAVVGGAQHALAL------RGD-----GTLWA 373

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG    G+LGH   ER ++P  + RL D   + A  G   ++   G G V++ G   +GQ
Sbjct: 374 WGGGLAGQLGHGGSERHVVPAPLLRLADVASMAA--GSFHSLAALGDGTVWSWGRNTYGQ 431

Query: 516 LGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           LG+    +R   V VEG      ++G+++  +H   + + G+V+ WG+NA GQLG G ++
Sbjct: 432 LGDGTTAERHAAVRVEGL---SGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGDGSTR 488

Query: 575 ERETPTFVEALRDRQVESVVCGSSITAAI 603
           +R  P  V  L    V +V  G S T A+
Sbjct: 489 DRARPVAVSGL--TSVVAVATGGSHTMAL 515



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 158/362 (43%), Gaps = 30/362 (8%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            V ++S G   +  V ++G  + WG    G+LG   N     PK V  +    V+++S G 
Sbjct: 952  VASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVK--RVRAMSAGA 1009

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL-PRKLFDTLDGVRVSKVACGEWHTA 382
                AL + G ++TWG N  G   +G+  S   W+ PR++ +  D   V  VA GE  + 
Sbjct: 1010 HHVVALGEDGAVWTWGDNTLGQ--LGDGTSAPTWMWPRQVPELRD---VEAVAAGEQFSV 1064

Query: 383  IVSTSGQLFTYGDGTFGVLGHGN----LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             V   G    +G   +G LG G     L  V    E   LR   V++V     H  A+  
Sbjct: 1065 AVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLR-QPVRTVRAWAQHAVAL-- 1121

Query: 439  IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
             M D        G +  WGD   G+LG    ER+  P  V  L     V  S G   ++ 
Sbjct: 1122 -MAD--------GTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTGV--VAVSTGAWHSLA 1170

Query: 499  LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
            L   G V+  G+   GQLG+     R+  V    L++  V  I +G YH   + S GSV+
Sbjct: 1171 LRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVW 1228

Query: 559  TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
             WG NA GQLG G ++ R  P  VE L +  V SV  G   + A+    S+     ++  
Sbjct: 1229 AWGYNAFGQLGDGTAESRLLPVRVEGLSN--VTSVAGGDHHSLALLADGSLGAWGNNAAG 1286

Query: 619  QC 620
            Q 
Sbjct: 1287 QL 1288



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 157/350 (44%), Gaps = 30/350 (8%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN 315
           +E A +  +  ++ G  HA  + K+G V+ WG    G+LG     D + P  V  L    
Sbjct: 244 VEVAHISGISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLE--R 301

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKV 374
           V++V+  +  + AL ++G +  WG N  G   +G+  +     P ++     G+R V+ V
Sbjct: 302 VKAVASMDASSLALLEAGSVLAWGANGSGQ--LGDSGTDDRATPGEV----PGLRSVAAV 355

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT- 433
             G  H   +   G L+ +G G  G LGHG  +    P  +  LR   V S+A G +H+ 
Sbjct: 356 VGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPL--LRLADVASMAAGSFHSL 413

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
           AA+ D            G +++WG    G+LG      +     V  L     V AS   
Sbjct: 414 AALGD------------GTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHH 461

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
            L VG  G   V+  G    GQLG+   +DR+  V    L    V  +++G  H   L  
Sbjct: 462 SLAVGADG--TVWAWGRNAAGQLGDGSTRDRARPVAVSGLTS--VVAVATGGSHTMALRG 517

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+V+ WG NA GQLG G + +R TP  V   R   V +V  G+  + A+
Sbjct: 518 DGTVWAWGYNALGQLGDGTTVDRLTP--VRVARLDSVVAVAAGTYFSMAL 565



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 159/393 (40%), Gaps = 37/393 (9%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           GG   G +    T +  L P  L S    D+ ++  G  H+  + + G V+ WG    G+
Sbjct: 74  GGNTSGQLGGEATPLQRLAPAPLPSP--RDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQ 131

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LG     D   P  V  L+  +V +V+ G+F + AL   G ++ WG N HG      +  
Sbjct: 132 LGDGTTTDRVTPMQVAGLT--DVVAVAAGDFHSLALRGDGTVWAWGTNFHG------QLG 183

Query: 354 RSHWLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
           R H  P    + + G+  V  +A G   T  V   G +  +G  + G LG G       P
Sbjct: 184 RGHTEPGLTPEPVPGLEGVVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAP 243

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
            EV  + G  + +V  G +H  A+              G ++TWG    G+LG      +
Sbjct: 244 VEVAHISG--ISAVTAGTYHAVAL-----------GKDGGVWTWGANSSGQLGDGAWSDR 290

Query: 473 LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
            +P  V  L     V +     L   L   G V   G+   GQLG+    DR+       
Sbjct: 291 AVPARVPGLERVKAVASMDASSLA--LLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPG 348

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           L+   V  +  G+ H   L   G+++ WG    GQLG G S+    P  +  LR   V S
Sbjct: 349 LRS--VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPL--LRLADVAS 404

Query: 593 VVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
           +  GS        H   ++GD +  S  R  +G
Sbjct: 405 MAAGS-------FHSLAALGDGTVWSWGRNTYG 430



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 152/332 (45%), Gaps = 27/332 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCGEFQ 325
           I+ G++H+  V+  G V+ WG    G+LG +   +    P  +   S  ++ SV  GE  
Sbjct: 54  IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLP--SPRDIVSVVSGEAH 111

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           + AL ++G ++ WG N+ G   +G+  +     P ++    D   V  VA G++H+  + 
Sbjct: 112 SLALDEAGTVWAWGGNSSGQ--LGDGTTTDRVTPMQVAGLTD---VVAVAAGDFHSLALR 166

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G ++ +G    G LG G+ +    P+ V  L G  V ++A G   T A++D       
Sbjct: 167 GDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMDD------ 218

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G +  WG    G+LG     ++L P  V  +     V A  G    V L   G V
Sbjct: 219 -----GTVRAWGANSSGQLGDGTFTQRLAPVEVAHISGISAVTA--GTYHAVALGKDGGV 271

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +T G+   GQLG+    DR++      L  E VK ++S       L   GSV  WG N +
Sbjct: 272 WTWGANSSGQLGDGAWSDRAVPARVPGL--ERVKAVASMDASSLALLEAGSVLAWGANGS 329

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           GQLG   + +R TP  V  L  R V +VV G+
Sbjct: 330 GQLGDSGTDDRATPGEVPGL--RSVAAVVGGA 359



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 176/429 (41%), Gaps = 82/429 (19%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L P  ++ A + +V  ++ G+ HA  V  +G V+ WG+  +G+LG     D   P  V  
Sbjct: 591 LFP--VQVAGLTNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPG 648

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS--------------- 355
           L+GI   +VS G   + AL   G +  WG+N +G    G   SR                
Sbjct: 649 LTGIT--AVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALH 706

Query: 356 ----HWLPRKLFDTLDGV--------------------------RVSKVACGEWHTAIVS 385
               H L      TL G                           RV ++A G  HT +V 
Sbjct: 707 PSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVDRLAVGRAHTLMVR 766

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRC 444
             G +  +G+   G LG G   + + P  V   RG+  V+SVA G  H+ A+       C
Sbjct: 767 PDGAVLAWGENASGQLGDGTTTHRAGPVLV---RGVPCVRSVASGVLHSLALA------C 817

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G ++ WG   +G+LG      +++P  V  L     V A     L   L   G 
Sbjct: 818 D-----GSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASLA--LLADGT 870

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            +  G+  HGQLG+    DR+   V G+LK    +  ++ G  H       G+++ WG N
Sbjct: 871 AWAWGANAHGQLGDGSTSDRA---VPGQLKLPSNIMSVALGETHGLAAGEDGALWAWGAN 927

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI---------CLHKSISVGDQ 614
            +GQLG G +    TP  V+ L    V SV  G + + A+           + S  +GD 
Sbjct: 928 GSGQLGEGSTTPSPTPVRVKGLEG--VASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDG 985

Query: 615 SSCSQCRMP 623
           ++ SQ R+P
Sbjct: 986 TNHSQ-RVP 993



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 152/376 (40%), Gaps = 76/376 (20%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--------- 314
            V++++ G  H+  +  +G V+ WG    G+LG         P  V+ L G          
Sbjct: 802  VRSVASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDA 861

Query: 315  ---------------------------------------NVQSVSCGEFQTCALTKSGEI 335
                                                   N+ SV+ GE    A  + G +
Sbjct: 862  SLALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGAL 921

Query: 336  YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
            + WG N  G   +GE  +     P ++   L+G  V+ V+ G   +  V   G  + +G 
Sbjct: 922  WAWGANGSGQ--LGEGSTTPSPTPVRV-KGLEG--VASVSAGRAFSLAVRQDGTAWAWGA 976

Query: 396  GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
               G LG G   +   PK+V S++  +V++++ G  H  A+ +            G ++T
Sbjct: 977  NPSGQLGDGTNHSQRVPKQVTSVK--RVRAMSAGAHHVVALGED-----------GAVWT 1023

Query: 456  WGDADKGRLGHVDGERK---LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
            WGD   G+LG  DG      + P  V  L D + V A  G   +V +   G  +  GS  
Sbjct: 1024 WGDNTLGQLG--DGTSAPTWMWPRQVPELRDVEAVAA--GEQFSVAVLVGGGAHAWGSNE 1079

Query: 513  HGQLGNPKAKDRSITV---VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            +GQLG+ K   R   V   +E     + V+ + + + H   L + G+V  WG NA+GQLG
Sbjct: 1080 YGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLG 1139

Query: 570  LGDSQERETPTFVEAL 585
             G ++ R  P  V  L
Sbjct: 1140 DGTTERRAAPVVVRGL 1155



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 142/365 (38%), Gaps = 52/365 (14%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           +  V  ++ G  H   +  +G V+ WG    G+LG    +D   P  V  L   +V +V+
Sbjct: 499 LTSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVARLD--SVVAVA 556

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
            G + + AL   G ++TWG    G    G    R    P ++    +   V++VA G  H
Sbjct: 557 AGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQRL--FPVQVAGLTN---VTRVAAGSAH 611

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI-VDI 439
              V   G ++ +GD   G LG G   +  +P +V  L G  + +V+ G  H+ A+  D 
Sbjct: 612 ALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTG--ITAVSGGRSHSMALHGDG 669

Query: 440 MVDRCKSNAIG--------------------------------------GKLFTWGDADK 461
            V     N  G                                      G L  WG    
Sbjct: 670 SVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRF 729

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG         P  V  L   D  + + GR  T+ +   G V   G    GQLG+   
Sbjct: 730 GQLGLGAAGWSSRPVQVRGLGRVD--RLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTT 787

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
             R+  V+   +    V+ ++SG  H   L   GSV+ WG N  GQLG G +  R  P  
Sbjct: 788 THRAGPVLVRGVP--CVRSVASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPAR 845

Query: 582 VEALR 586
           V+ L+
Sbjct: 846 VDGLQ 850


>gi|198415530|ref|XP_002126613.1| PREDICTED: similar to NIMA (never in mitosis gene a)-related
           expressed kinase 8 [Ciona intestinalis]
          Length = 720

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 147/339 (43%), Gaps = 39/339 (11%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           K   V+CWG G            VS P KL    S   V     G  Q   +T S  + +
Sbjct: 317 KHYTVYCWGNG------------VSTPIKLPLPNSDTQVLHACVGRTQKACVTGSRRLLS 364

Query: 338 WGHNNHGA--DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           W   +  +     G+ +    +LPR   +   GV + +VACGE HTA ++  G L T+G 
Sbjct: 365 WETTSSTSLPGSFGDSQLMPSYLPR-FMEGQSGVNIKQVACGELHTACLTDRGILMTFGS 423

Query: 396 GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
           G+ G LGHGN Q+V +   VE L G ++  +A G +H  A+              G++F+
Sbjct: 424 GSNGCLGHGNFQDVEKATIVEQLLGSELIEIASGSYHMLAVTS-----------DGEVFS 472

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG  D GRLG    E   +P  V      +    SCG   ++  T        GS  H +
Sbjct: 473 WGKGDNGRLGLNSEETVAVPMMVPLPEVIEPCSVSCGVDCSMISTRSKMALAAGSNHHNR 532

Query: 516 LGNPKAKDRSIT--VVEGK----LKEE-----FVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           LG     D  I     E      L+ E      +  IS G  H  ++T+ GS+Y +G N 
Sbjct: 533 LGLDVIHDGKILKETTESSCFVPLRSEPISLGNISKISLGLQHSGIITTDGSLYMFGLNN 592

Query: 565 NGQLGLGDSQER-ETPTFVEALRDRQVESVVCGSSITAA 602
            GQLG   SQ     P  V A+++ +  +V CG S T A
Sbjct: 593 CGQLGTLPSQSAPRMPHKVTAVKNAKFSAVSCGGSFTIA 631



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 10/280 (3%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP+ +E    ++++ ++ G  H A +T  G +  +G G +G LGH    DV    +VE L
Sbjct: 387 LPRFMEGQSGVNIKQVACGELHTACLTDRGILMTFGSGSNGCLGHGNFQDVEKATIVEQL 446

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            G  +  ++ G +   A+T  GE+++WG  ++G   +G     +  +P  +    + +  
Sbjct: 447 LGSELIEIASGSYHMLAVTSDGEVFSWGKGDNGR--LGLNSEETVAVPM-MVPLPEVIEP 503

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN---VSQPKEVESLRGLKVKSVAC 428
             V+CG   + I + S      G      LG   + +   + +  E      L+ + ++ 
Sbjct: 504 CSVSCGVDCSMISTRSKMALAAGSNHHNRLGLDVIHDGKILKETTESSCFVPLRSEPISL 563

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK-LLPTCVTRLVDFDFV 487
           G     + + + +         G L+ +G  + G+LG +  +    +P  VT + +  F 
Sbjct: 564 G---NISKISLGLQHSGIITTDGSLYMFGLNNCGQLGTLPSQSAPRMPHKVTAVKNAKFS 620

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
             SCG   T+  T   +VY+ G    GQLG P +  ++++
Sbjct: 621 AVSCGGSFTIAATDDHQVYSWGKPSRGQLGRPTSDTKNVS 660



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 3/150 (2%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG + +  T+    +P   E   + ++  ISLG +H+ ++T +G ++ +G    G+LG  
Sbjct: 540 DGKILKETTESSCFVPLRSEPISLGNISKISLGLQHSGIITTDGSLYMFGLNNCGQLGTL 599

Query: 298 VNMDVS-CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG--ADLVGERRSR 354
            +      P  V  +      +VSCG   T A T   ++Y+WG  + G       + ++ 
Sbjct: 600 PSQSAPRMPHKVTAVKNAKFSAVSCGGSFTIAATDDHQVYSWGKPSRGQLGRPTSDTKNV 659

Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
           S     KL D L  + V  ++    +T +V
Sbjct: 660 SSPAQLKLHDPLVDMEVVSLSASHGNTLLV 689


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 44/346 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      +S P  ++ L    V+  +CG   T
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T +G +Y  G NN G   +G+   R  +     F   D ++  +++ G   +A ++ 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIK--QLSAGANTSAALTE 195

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N  NV  P EV    G  +  ++CG +H+A +          
Sbjct: 196 DGKLFMWGDNSEGQIGLKNKSNVCIPHEV--TVGKPISWISCGYYHSAFVT--------- 244

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G+L+T+G+ + G+LG  +   +LL     P  V  + D   +Q +CG   TV LT 
Sbjct: 245 --TDGELYTFGEPENGKLGLPN---QLLINHRSPQRVLGIPD-KVIQVACGGGHTVVLTE 298

Query: 502 LGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              VY  G    GQLG          PK  DR        +K++ +  IS G  H A++T
Sbjct: 299 -KVVYAFGLGQFGQLGLGTFLFETSEPKIIDR--------IKDQKISHISCGENHTALMT 349

Query: 553 SGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
             G +YT+G   +G+LGLG  +   +  PT         V+ + CG
Sbjct: 350 DIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 51/277 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTAIV+ + +L+ +G   +G LG G+   +S+P  +++L+  KVK  ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 434 AAIVDI------------------MVDRCKSNAIG------------------------G 451
               D                     DR   + IG                        G
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDG 197

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           KLF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTTDGELYTFGEP 255

Query: 512 VHGQLGNPKA---KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG P       RS   V G + ++ ++ ++ G  H  VLT    VY +G    GQL
Sbjct: 256 ENGKLGLPNQLLINHRSPQRVLG-IPDKVIQ-VACGGGHTVVLTE-KVVYAFGLGQFGQL 312

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAIC 604
           GLG    E   P  ++ ++D+++  + CG + TA + 
Sbjct: 313 GLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMT 349


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G NN G   +G+   RS +     F +    ++ +++ G   +A ++ 
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR--KIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G+L+T+G+ + G+LG  +       +P  V  +     VQ +CG   TV LT    
Sbjct: 207 --TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA- 262

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VYT G    GQLG      + S+      +K++ +  I+ G  H A++T  G +YT+G  
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322

Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            +G+LGLG  +S  +  PT         V+ V CG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 23/234 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G +   +V  P+ V    G  +  +SCG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  G++YT+G    G   +  +   +H +P+     + G+  +V +VACG  HT
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQP----VPGIPGKVVQVACGGGHT 255

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G  L   S PK +E ++  K+  +ACG  HTA I D+ 
Sbjct: 256 -VVLTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM- 313

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                     G ++T+GD   G+  LG  +   + +PT  +  + F     SCG
Sbjct: 314 ----------GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 31/291 (10%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +G     +VS+  T V AL P+ ++ A        + G  H  + T+ G+V+  G   
Sbjct: 65  GQLGLGSKSTVSK-PTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKVYAAGGNN 115

Query: 291 DGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
           +G+LG     + S   L+    S   ++ +S G   + ALT+ GE++ WG N+ G   +G
Sbjct: 116 EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQ--IG 173

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQ 407
                +  +P+++     G  +S ++CG +H+A V+T GQL+T+G+   G LG  N  L 
Sbjct: 174 LENVTNVCVPQQV---TVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV 230

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-H 466
           N   P+ V  + G KV  VACG  HT  + +  V            +T+G    G+LG  
Sbjct: 231 NHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKAV------------YTFGLGQFGQLGLG 277

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                  +P  +  + D      +CG   T  +T +G +YT G   HG+LG
Sbjct: 278 TFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 57/279 (20%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTA+V+ + +L+ +G   +G LG G+   VS+P  V++L+  KVK  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 434 AA------------------------------IVDIMVDRCKSNAIG------------G 451
                                           ++     + K   +             G
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGQLYTFGEP 217

Query: 512 VHGQLGNPKA------KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G+LG P          + +  + GK+ +     ++ G  H  VLT   +VYT+G    
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-----VACGGGHTVVLTE-KAVYTFGLGQF 271

Query: 566 GQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLGLG    E   P  +E ++D+++  + CG + TA I
Sbjct: 272 GQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310


>gi|332848168|ref|XP_511801.3| PREDICTED: serine/threonine-protein kinase Nek8 [Pan troglodytes]
          Length = 646

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 156/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G    LG  + + +   ++V+         V+ G  
Sbjct: 250 RGIPRGPVRPAIPPPLSSVYAWGGG----LGTPLRLPMLNTEVVQ---------VAAGRT 296

Query: 325 QTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W     GA     L G           +  +   GV +  VACG++ 
Sbjct: 297 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 356

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  H   ++ + 
Sbjct: 357 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASH---VLALS 413

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D GRLG    E    P  V      +  +  CG   ++ LT
Sbjct: 414 TER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILT 465

Query: 501 GLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEFVKGISSGSY 546
             G+    GS    +LG         P    +     S T++    L +E +  I  G+ 
Sbjct: 466 VPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTA 525

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 526 HSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 582



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 132/302 (43%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 307 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 363

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 364 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 423

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R   SH  P+++     G    +V CG   + I++  GQ    G   F  
Sbjct: 424 GDSGRLGLGTR--ESHSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 480

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 481 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 538

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L        +CG   TV +   G+VY+ G    G+
Sbjct: 539 FGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGR 598

Query: 516 LG 517
           LG
Sbjct: 599 LG 600



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 149/356 (41%), Gaps = 38/356 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 287 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 346

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 347 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVA 403

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 404 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 457

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 458 -----IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 512

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  
Sbjct: 513 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAM 571

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           ++ G      + + G VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 572 VACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 627



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 283 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 341

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 342 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 400

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 401 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 439


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G NN G   +G+   RS +     F +    ++ +++ G   +A ++ 
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQ--RKIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G+L+T+G+ + G+LG  +       +P  V  +     VQ +CG   TV LT    
Sbjct: 207 --TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA- 262

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VYT G    GQLG      + S+      +K++ +  I+ G  H A++T  G +YT+G  
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322

Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            +G+LGLG  +S  +  PT         V+ V CG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 23/234 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G +   +V  P+ V    G  +  +SCG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  G++YT+G    G   +  +   +H +P+     + G+  +V +VACG  HT
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQ----PVPGIPGKVVQVACGGGHT 255

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G  L   S PK +E ++  K+  +ACG  HTA I D+ 
Sbjct: 256 -VVLTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM- 313

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                     G ++T+GD   G+  LG  +   + +PT  +  + F     SCG
Sbjct: 314 ----------GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 31/291 (10%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +G     +VS+  T V AL P+ ++ A        + G  H  + T+ G+V+  G   
Sbjct: 65  GQLGLGSKSTVSK-PTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKVYAAGGNN 115

Query: 291 DGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
           +G+LG     + S   L+    S   ++ +S G   + ALT+ GE++ WG N+ G   +G
Sbjct: 116 EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQ--IG 173

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQ 407
                +  +P+++     G  +S ++CG +H+A V+T GQL+T+G+   G LG  N  L 
Sbjct: 174 LENVTNVCVPQQV---TVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV 230

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-H 466
           N   P+ V  + G KV  VACG  HT  + +  V            +T+G    G+LG  
Sbjct: 231 NHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKAV------------YTFGLGQFGQLGLG 277

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                  +P  +  + D      +CG   T  +T +G +YT G   HG+LG
Sbjct: 278 TFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 57/279 (20%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTA+V+ + +L+ +G   +G LG G+   VS+P  V++L+  KVK  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 434 AA------------------------------IVDIMVDRCKSNAIG------------G 451
                                           ++     + K   +             G
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGQLYTFGEP 217

Query: 512 VHGQLGNPKA------KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G+LG P          + +  + GK+ +     ++ G  H  VLT   +VYT+G    
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-----VACGGGHTVVLTE-KAVYTFGLGQF 271

Query: 566 GQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLGLG    E   P  +E ++D+++  + CG + TA I
Sbjct: 272 GQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 161/328 (49%), Gaps = 36/328 (10%)

Query: 246  TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC- 304
            T+VDAL P             I+ G  HA  +  +G V+ WG   DG+LG   +   S  
Sbjct: 1027 TKVDALPP----------AAKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTK 1076

Query: 305  --PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
              P+ +  +S  NV +++CG   + A+ + G +++WG+N +G   +G+  S++   P+K+
Sbjct: 1077 NRPQKINAIS--NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKT--TPQKV 1132

Query: 363  FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
                    V+ +A GE+++  ++  G ++++GD + G LG G+ ++ + P++VE L    
Sbjct: 1133 NAI---SNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS--N 1187

Query: 423  VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
            V ++A G  H+ A+              G +++WG   +G+LG  D + +  P  VT + 
Sbjct: 1188 VAAIAAGEDHSLALT-----------RDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTIS 1236

Query: 483  DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-EFVKGI 541
            +   + A       +   GL   +  G    GQLG   +   +      K+K    V G+
Sbjct: 1237 NIKAIAAGNSHSFAISEEGL--AWAWGYNYDGQLGIGTSGSLANENTPQKVKVISNVVGL 1294

Query: 542  SSGSYHVAVLTSGGSVYTWGKNANGQLG 569
            S G+YH   LT  G+++ WG N +GQ+G
Sbjct: 1295 SGGNYHSLALTEDGALWAWGDNDDGQIG 1322



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 153/315 (48%), Gaps = 44/315 (13%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC---PKLVECLSGINVQSVSCGE 323
           I+ G  HA  +  +G V+ WG    G+LG       S    P+ +  +S  NV +++CG 
Sbjct: 549 IAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS--NVAAIACGG 606

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL + G  ++WG+N +G   +G+  S++   PRK+ + L    V  +A G+ H+  
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKT--TPRKV-NAL--SNVVAMAAGDRHSLA 661

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++  G L+++GD T+G LG G+  + + P++V ++    V ++A G  H+ A+       
Sbjct: 662 LTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS--NVVAIAAGYRHSLALT------ 713

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G +++WG+  +G+LG  D + +  P  VT + +   +  + G   ++ ++  G
Sbjct: 714 -----RDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISEEG 766

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF----------VKGISSGSYHVAVLTS 553
            V+  G    GQLG             G L +E           V G+S+GS H   LT 
Sbjct: 767 LVWAWGYNCSGQLG---------IGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTE 817

Query: 554 GGSVYTWGKNANGQL 568
            G+++ WG N  GQ+
Sbjct: 818 DGALWAWGNNEAGQI 832



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 142/288 (49%), Gaps = 25/288 (8%)

Query: 319  VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
            V+ G   + AL   G +++WG N  G   +G  +S + + P K+ D L     +K+A G+
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKV-DAL--PPAAKIAAGD 1042

Query: 379  WHTAIVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
             H   ++  G ++++G   DG  G+   G     ++P+++ ++    V ++ACG  H+ A
Sbjct: 1043 NHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS--NVAAIACGGSHSLA 1100

Query: 436  IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
            +           A  G L++WG    G+LG  D   K  P  V  + +   + A  G   
Sbjct: 1101 V-----------ARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAA--GEYY 1147

Query: 496  TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
            ++ LT  G V++ G    GQLG    +DR+       L    V  I++G  H   LT  G
Sbjct: 1148 SLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSN--VAAIAAGEDHSLALTRDG 1205

Query: 556  SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            SV++WG+N+ GQLGL D+ +R TP  V  +    ++++  G+S + AI
Sbjct: 1206 SVWSWGRNSRGQLGLDDNDDRNTPQPVTTI--SNIKAIAAGNSHSFAI 1251



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 36/320 (11%)

Query: 272 KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTK 331
            H+  +  +G V+ WG     +LG   +++   P+    +S  N+ SV+ G   + AL  
Sbjct: 77  DHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALAS 134

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
            G ++ WG N +G   +G+  +R    P K     D   V+ +A G++H    + SG+++
Sbjct: 135 DGSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSD---VAAIAGGDYHALAATQSGEVW 189

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             G    G LG     +   P +V  L    VKSVA G + + A+        K++   G
Sbjct: 190 AMGRNDHGQLGF-TGDHADAPVQVAGLS--NVKSVAAGEFFSLAL--------KND---G 235

Query: 452 KLFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
            ++ WG+ +  +LG  + GE    P  +  L +   + A  GR   + L   G V+  G+
Sbjct: 236 TVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAA--GRRHAMALAEDGSVWAWGA 293

Query: 511 AVHGQLG-----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
              GQLG      PKA  R  ++ +       V  I+SG +H   LTS G ++ WG N +
Sbjct: 294 NGSGQLGFGDFETPKAPGRVSSLAD-------VTAIASGWFHSLALTSDGVLWAWGNNGD 346

Query: 566 GQLGLGDSQERETPTFVEAL 585
           G+LG   + ++  P  V ++
Sbjct: 347 GRLGTDATSDQSLPAQVSSI 366



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 23/213 (10%)

Query: 263  DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
            +V  I+ G  ++  +T++G V+ WG+  DG+LG   N D + P+ VE LS  NV +++ G
Sbjct: 1137 NVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS--NVAAIAAG 1194

Query: 323  EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            E  + ALT+ G +++WG N+ G   + +   R+   P           +  +A G  H+ 
Sbjct: 1195 EDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTI-----SNIKAIAAGNSHSF 1249

Query: 383  IVSTSGQLFTYG---DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
             +S  G  + +G   DG  G+   G+L N + P++V+ +    V  ++ G +H+ A+ + 
Sbjct: 1250 AISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NVVGLSGGNYHSLALTED 1307

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK 472
                       G L+ WGD D G++G   G+RK
Sbjct: 1308 -----------GALWAWGDNDDGQIGSTGGDRK 1329



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 36/329 (10%)

Query: 267  ISLGAKHAALVTKEGEVFCWGEGK--DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
            ++ G   +  +  +G ++ WG+       LG   +++V  P  V+ L       ++ G+ 
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP--PAAKIAAGDN 1043

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKVACGEWHTAI 383
               AL   G +++WG+N+ G   +G   + S    P+K+        V+ +ACG  H+  
Sbjct: 1044 HALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAI---SNVAAIACGGSHSLA 1100

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            V+  G L+++G   +G LG G+  + + P++V ++    V ++A G +++ A+       
Sbjct: 1101 VARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAIS--NVAAIAAGEYYSLALT------ 1152

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                   G +++WGD   G+LG  D E +  P  V  L +   + A  G   ++ LT  G
Sbjct: 1153 -----RDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAA--GEDHSLALTRDG 1205

Query: 504  KVYTMGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             V++ G    GQLG     DR+    +T +        +K I++G+ H   ++  G  + 
Sbjct: 1206 SVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN------IKAIAAGNSHSFAISEEGLAWA 1259

Query: 560  WGKNANGQLGLGDS---QERETPTFVEAL 585
            WG N +GQLG+G S       TP  V+ +
Sbjct: 1260 WGYNYDGQLGIGTSGSLANENTPQKVKVI 1288



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 34/338 (10%)

Query: 247 QVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPK 306
            ++ L P+  ++ V+ ++ +++ G   +  +  +G ++ WG    G+LG   N +   P 
Sbjct: 104 DINRLAPE--QAPVVSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPS 161

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-DLVGERRSRSHWLPRKLFDT 365
               LS  +V +++ G++   A T+SGE++  G N+HG     G+        P ++   
Sbjct: 162 KTPGLS--DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADA----PVQVAGL 215

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVK 424
                V  VA GE+ +  +   G ++ +G+     LG G   + V+ P  +  L    + 
Sbjct: 216 ---SNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS--NIT 270

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
           ++A G  H  A+           A  G ++ WG    G+LG  D E    P  V+ L D 
Sbjct: 271 AIAAGRRHAMAL-----------AEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADV 319

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
             +  + G   ++ LT  G ++  G+   G+LG     D+S+      +        + G
Sbjct: 320 TAI--ASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAVS--FAGG 375

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             H   + + GSV++WG NA GQLG+    E  TP  V
Sbjct: 376 QRHSLAIAADGSVWSWGGNAYGQLGV----ESLTPASV 409



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 148/312 (47%), Gaps = 33/312 (10%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV--NMDVSCPKLVECLSGINVQSVSCGEF 324
           ++ G   +  +  +G V+ WG    G+LG  +  N DV  P  V+ L      S++ G  
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGG 554

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRS-HWLPRKLFDTLDGVRVSKVACGEWHTAI 383
              AL   G +++WG N+ G   +G   + S    P+K+        V+ +ACG  H+  
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI---SNVAAIACGGSHSLA 611

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++  G  +++G   +G LG G+  + + P++V +L    V ++A G  H+ A+       
Sbjct: 612 LARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAGDRHSLALT------ 663

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                + G L++WGD   G+LG  D + +  P  V  +   + V  + G   ++ LT  G
Sbjct: 664 -----LDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS--NVVAIAAGYRHSLALTRDG 716

Query: 504 KVYTMGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
            V++ G+   GQLG     DR+    +T +        +K I+ G+ +   ++  G V+ 
Sbjct: 717 SVWSWGNNTRGQLGLGDNDDRNTPQPVTTISN------IKAIAVGNNYSIAISEEGLVWA 770

Query: 560 WGKNANGQLGLG 571
           WG N +GQLG+G
Sbjct: 771 WGYNCSGQLGIG 782



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 25/288 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           V+ G   + AL   G +++WG+N  G   +G   +   + P  + D L     + +A G 
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNV-DAL--PLAASIAAGG 553

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS---QPKEVESLRGLKVKSVACGPWHTAA 435
            H   +++ G ++++G  + G LG G     S   +P+++ ++    V ++ACG  H+ A
Sbjct: 554 GHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS--NVAAIACGGSHSLA 611

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
           +           A  G  ++WG    G+LG  D   K  P  V  L +   V  + G   
Sbjct: 612 L-----------ARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSNV--VAMAAGDRH 658

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           ++ LT  G +++ G   +GQLG      R+       +    V  I++G  H   LT  G
Sbjct: 659 SLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISN--VVAIAAGYRHSLALTRDG 716

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           SV++WG N  GQLGLGD+ +R TP  V  +    ++++  G++ + AI
Sbjct: 717 SVWSWGNNTRGQLGLGDNDDRNTPQPVTTI--SNIKAIAVGNNYSIAI 762



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 22/263 (8%)

Query: 325 QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            + AL   G ++ WG N++    +G+  +R   L  +    +    +  VA G   +  +
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINR---LAPEQAPVV--SNIVSVAAGRLFSLAL 132

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           ++ G L+ +G   +G LG G+  N   P +   L    V ++A G +H  A         
Sbjct: 133 ASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQ------ 184

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G+++  G  D G+LG   G+    P  V  L +   V A  G   ++ L   G 
Sbjct: 185 -----SGEVWAMGRNDHGQLGFT-GDHADAPVQVAGLSNVKSVAA--GEFFSLALKNDGT 236

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V+  G+    QLG   A +   T     +    +  I++G  H   L   GSV+ WG N 
Sbjct: 237 VWAWGNNESAQLGTGIAGEAVATPAPIAVLSN-ITAIAAGRRHAMALAEDGSVWAWGANG 295

Query: 565 NGQLGLGDSQERETPTFVEALRD 587
           +GQLG GD +  + P  V +L D
Sbjct: 296 SGQLGFGDFETPKAPGRVSSLAD 318



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 24/241 (9%)

Query: 374  VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ--NVSQPKEVESLRGLKVKSVACGPW 431
            VA G   +  + T G L+++GD   G LG G  Q  NV  P +V++L       +A G  
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP--PAAKIAAGDN 1043

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG---ERKLLPTCVTRLVDFDFVQ 488
            H  A+           A  G +++WG    G+LG         K  P  +  + +   + 
Sbjct: 1044 HALAL-----------APDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI- 1091

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
             +CG   ++ +   G +++ G   +GQLG     + S T  +       V  I++G Y+ 
Sbjct: 1092 -ACGGSHSLAVARDGSLWSWGYNYYGQLG--LGDNYSKTTPQKVNAISNVAAIAAGEYYS 1148

Query: 549  AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
              LT  GSV++WG N++GQLGLGD+++R TP  VE L    V ++  G   + A+    S
Sbjct: 1149 LALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVL--SNVAAIAAGEDHSLALTRDGS 1206

Query: 609  I 609
            +
Sbjct: 1207 V 1207



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 154/377 (40%), Gaps = 48/377 (12%)

Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI-NVQ 317
           AV+ ++  I+ G +HA  + ++G V+ WG    G+LG     D   PK    +S + +V 
Sbjct: 264 AVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFG---DFETPKAPGRVSSLADVT 320

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +++ G F + ALT  G ++ WG+N  G   +G   +    LP ++    + V     A G
Sbjct: 321 AIASGWFHSLALTSDGVLWAWGNNGDG--RLGTDATSDQSLPAQVSSISNAV---SFAGG 375

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV--------ACG 429
           + H+  ++  G ++++G   +G LG  +L   S    V +L   +   +        A  
Sbjct: 376 QRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAAN 435

Query: 430 PWHTAAIVDIMVDR-----CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
            W      D  +D      C SN         G  D+      DG       C       
Sbjct: 436 IWDDDDDGDGFLDESDNCPCVSNP--------GQEDE----DGDGTGDFCDGCPGDFFKI 483

Query: 485 DFVQASCGR---MLTVG------LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
               + CG    M+  G      L   G V++ G+   GQLG    ++  +         
Sbjct: 484 QPGFSGCGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDAL 543

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET---PTFVEALRDRQVES 592
                I++G  H   L S GSV++WG+N+ GQLGLG      T   P  + A+    V +
Sbjct: 544 PLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI--SNVAA 601

Query: 593 VVCGSSITAAICLHKSI 609
           + CG S + A+    S 
Sbjct: 602 IACGGSHSLALARDGSF 618



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V  I+ G +H+  +T++G V+ WG    G+LG   N D + P+ V  +S  N+++++ G
Sbjct: 698 NVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTIS--NIKAIAVG 755

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW-LPRKLFDTLDGVRVSKVACGEWHT 381
              + A+++ G ++ WG+N  G   +G   S +    P+K+        V  ++ G  H+
Sbjct: 756 NNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVI---SNVVGLSAGSSHS 812

Query: 382 AIVSTSGQLFTYGDGTFG 399
             ++  G L+ +G+   G
Sbjct: 813 IALTEDGALWAWGNNEAG 830


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 171/372 (45%), Gaps = 46/372 (12%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN---VQSV 319
           ++++++ G  H   VT++G+++  G    G+LGH       C   ++ + G+    + SV
Sbjct: 36  NIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHD-----GCRTKLQKIPGVESLVMTSV 90

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           +CGE  + AL + G++YTWG ++ G   +G           K+  TL  + + +++CG  
Sbjct: 91  ACGEAHSMALNEWGQLYTWGSDSCGQ--LGLETDEGIQYKPKIVKTLASMLLVQISCGYK 148

Query: 380 HTAIVSTSGQLFTYGDGTF-GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           H   ++  G+L+T+G   F  +       NVS+P  V SL GL +  +ACG +H+  +  
Sbjct: 149 HCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV-- 206

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-----LPTCVTRLVDFDFVQASCGR 493
                    +  G +F WG  D G+LG ++ +  L     L T  T  V +     + G 
Sbjct: 207 ---------SKSGAVFGWGKNDFGQLG-INSQTSLSSPAQLKTIRTVKVKY----IAGGE 252

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT- 552
             +V LT  G V+T G+ ++GQLG+    +  +     +L    V  ++ G  H   L  
Sbjct: 253 DFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVP 312

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETP-------------TFVEALRDRQVESVVCGSSI 599
           S G VY++G  + GQLG   S    TP             + +E  +   V+S+  G   
Sbjct: 313 SKGRVYSFGLGSVGQLGTKSSINSNTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAGGDQ 372

Query: 600 TAAICLHKSISV 611
                 HKS+ +
Sbjct: 373 CFVRVTHKSLDI 384



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 18/264 (6%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGI 314
           +ES VM    +++ G  H+  + + G+++ WG    G+LG + +  +   PK+V+ L+ +
Sbjct: 82  VESLVM---TSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQYKPKIVKTLASM 138

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            +  +SCG     ALT  GE+YTWG N  G   +G            L ++L G+ +S +
Sbjct: 139 LLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVS--KPTLVNSLVGLPISFI 196

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           ACG +H+ +VS SG +F +G   FG LG  +  ++S P +++++R +KVK +A G     
Sbjct: 197 ACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGE---- 252

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
                  D        G +FT G    G+LGH     +++P  V  L+     Q +CGR 
Sbjct: 253 -------DFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 305

Query: 495 LTVGLT-GLGKVYTMGSAVHGQLG 517
            T+ L    G+VY+ G    GQLG
Sbjct: 306 HTLTLVPSKGRVYSFGLGSVGQLG 329



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 16/215 (7%)

Query: 253 PKLLES-AVMLDVQNISLGAKHAALVTKEGEVFCWGEGK-DGRLGHKVNMDVSCPKLVEC 310
           PK++++ A ML VQ IS G KH   +T  GE++ WG  +           +VS P LV  
Sbjct: 129 PKIVKTLASMLLVQ-ISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNS 187

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G+ +  ++CG + +  ++KSG ++ WG N+ G   +  + S S   P +L  T+  V+
Sbjct: 188 LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSS--PAQL-KTIRTVK 244

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +A GE  +  ++  G +FT G G +G LGHG+  N   P++V  L G  V  V CG 
Sbjct: 245 VKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGR 304

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            HT  +V             G+++++G    G+LG
Sbjct: 305 RHTLTLV----------PSKGRVYSFGLGSVGQLG 329



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 21/319 (6%)

Query: 283 VFCWGEGKDGRLGH---KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           ++CWG   +G LG    + N  +S  ++V   S  N++SV+CG   T A+T+ G++Y  G
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G       R++   +P      ++ + ++ VACGE H+  ++  GQL+T+G  + G
Sbjct: 61  SNDFGQLGHDGCRTKLQKIPG-----VESLVMTSVACGEAHSMALNEWGQLYTWGSDSCG 115

Query: 400 VLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG    + +  +PK V++L  + +  ++CG  H  A+ +            G+L+TWG 
Sbjct: 116 QLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTN-----------HGELYTWGS 164

Query: 459 ADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            + G+LG   G   +  PT V  LV       +CG   +  ++  G V+  G    GQLG
Sbjct: 165 NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLG 224

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                  S       ++   VK I+ G      LT  G V+T G    GQLG G      
Sbjct: 225 INSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEI 284

Query: 578 TPTFVEALRDRQVESVVCG 596
            P  V  L    V  V CG
Sbjct: 285 VPRKVLELMGSTVTQVTCG 303



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 25/276 (9%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           +Y WG+  +G   +G         P ++  F++++ ++   VACG  HT  V+  GQL+ 
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIK--SVACGNNHTLAVTEDGQLYA 58

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            G   FG LGH   +  ++ +++  +  L + SVACG  H+ A+ +            G+
Sbjct: 59  CGSNDFGQLGHDGCR--TKLQKIPGVESLVMTSVACGEAHSMALNE-----------WGQ 105

Query: 453 LFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           L+TWG    G+LG   D   +  P  V  L     VQ SCG    + LT  G++YT GS 
Sbjct: 106 LYTWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS- 164

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFV----KGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
              + G          V +  L    V      I+ G YH  V++  G+V+ WGKN  GQ
Sbjct: 165 --NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQ 222

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           LG+       +P  ++ +R  +V+ +  G   +  +
Sbjct: 223 LGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFL 258



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 16/180 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+ S V L +  I+ G  H+ +V+K G VF WG+   G+LG      +S P  ++ + 
Sbjct: 182 PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIR 241

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            + V+ ++ GE  +  LT  G ++T G   +G   +G     +  +PRK+ + L G  V+
Sbjct: 242 TVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQ--LGHGSFSNEIVPRKVLE-LMGSTVT 298

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V CG  HT  +V + G+++++G G+ G LG  +  N + P+ V             GPW
Sbjct: 299 QVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV------------LGPW 346


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 44/350 (12%)

Query: 233  IGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDG 292
            +GG   G+ + ++ Q++ + P +    +    Q +SLG  H+ ++ ++G ++ WG    G
Sbjct: 716  VGG---GTGNNSENQINTIRPDV---GINSYSQVLSLGDYHSGVIAQDGSLYMWGVNDFG 769

Query: 293  RLGHKVNMDVSCP-KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
            ++G     +   P K+++     +V SVS G++ + A+T+ G +Y WG N +G   +G+ 
Sbjct: 770  QIGDGTTKNRYKPTKILD-----HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQ--IGDG 822

Query: 352  RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
             +   + P K+ D      V  V+ G  H+  ++  G L+ +G    G +G G  ++  +
Sbjct: 823  TTEDRYKPTKILD-----HVIAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYK 877

Query: 412  PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER 471
            P ++       V +V+ G  H+ AI              G L+ WG   +G +G    E 
Sbjct: 878  PTKILD----HVIAVSLGVSHSGAITQ-----------DGSLYMWGSNSRGGIGDGTTEV 922

Query: 472  KLLPTCVTRLVDFDFVQASCGRMLTVG-LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
            +  PT +      D V A   +    G +T  G +Y  GS V+G++G+   +DR      
Sbjct: 923  RYKPTKI-----LDHVIAVSLQTGNSGAITQDGSLYMWGSNVYGEIGDGTEEDR---YKP 974

Query: 531  GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
             K+ +  +  +S G  H   +T  GS+Y WG+N  G++G G  ++R  PT
Sbjct: 975  TKILDHVI-AVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPT 1023



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 29/221 (13%)

Query: 261  MLD-VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINVQS 318
            +LD V  +SLG  H+  +T++G ++ WG    G +G         P K+++ +  +++Q+
Sbjct: 881  ILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRGGIGDGTTEVRYKPTKILDHVIAVSLQT 940

Query: 319  VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
             + G     A+T+ G +Y WG N +G   +G+      + P K+ D      V  V+ G+
Sbjct: 941  GNSG-----AITQDGSLYMWGSNVYGE--IGDGTEEDRYKPTKILD-----HVIAVSLGD 988

Query: 379  WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             H+  ++  G L+ +G   +G +G G  ++  +P ++       V +V+ G  H+ AI  
Sbjct: 989  DHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKILD----HVIAVSLGVGHSGAITQ 1044

Query: 439  IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT 479
                        G L+ WG    G++G    + +  PT +T
Sbjct: 1045 -----------DGSLYMWGWNSDGQIGDGTTKARYTPTQIT 1074



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 24/163 (14%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           +S G YH  V+   GS+Y WG N  GQ+G G ++ R  PT +       V SV  G   +
Sbjct: 744 LSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKIL----DHVVSVSLGDYYS 799

Query: 601 AAICLHKSI---------SVGDQSSCSQCR----------MPFGFRRKKHNCYNCGLHFC 641
            AI    S+          +GD ++  + +          +  G+        +  L+  
Sbjct: 800 GAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAVSLGYCHSGAITQDGSLYMW 859

Query: 642 SACSTKKIINASLTPNKGKPSRVCDTCYNHLQKITHSGRLLKQ 684
            +  + +I + + T ++ KP+++ D        ++HSG + + 
Sbjct: 860 GSNDSGQIGDGT-TEDRYKPTKILDHVIAVSLGVSHSGAITQD 901


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 157/377 (41%), Gaps = 25/377 (6%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           ++ WG    G ++G   +G+ + + T VD  LP    +  +           H+  +T  
Sbjct: 56  ILAWGSNFFG-ELG---NGTTTNSSTPVDVSLPADTAAVAIAAGD------AHSVALTAA 105

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V  WG+   G+LG     D   P  V   +G+   +V+ G   + ALT +G +  WG 
Sbjct: 106 GTVLAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGG 165

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G    G    RS  +   L  +     V+ VA G  H+  ++++G +  +G   FG 
Sbjct: 166 NSFGQLGDGTVVDRSTPVAVALPPS---TTVTAVAAGATHSVALTSAGTVLAWGGNPFGQ 222

Query: 401 LGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
           LG G + + S P  V       V +VA G  H+ A+              G +  WG   
Sbjct: 223 LGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTS-----------AGTVLAWGRNF 271

Query: 461 KGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
            G+LG      +  PT V+          + GR+ ++ LT  G V   G+   GQLG+  
Sbjct: 272 FGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDGT 331

Query: 521 AKDRSITVVEGKLKEEFVKGISS-GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
               S  V         +  IS+  S H   +TS G+  +WG+N  GQLG G +  R TP
Sbjct: 332 TTTSSTPVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTP 391

Query: 580 TFVEALRDRQVESVVCG 596
             V       V ++  G
Sbjct: 392 VDVHLPTGVTVTAIAAG 408



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 118/290 (40%), Gaps = 14/290 (4%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
            +  WG    G LG+    + S P  V   +     +++ G+  + ALT +G +  WG N
Sbjct: 55  TILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLAWGDN 114

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
           +HG   +G+        P  +     GV  S VA G  H+  ++++G +  +G  +FG L
Sbjct: 115 SHGQ--LGDGTGADSLTPVGV-SLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFGQL 171

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           G G + + S P  V       V +VA G  H+ A+              G +  WG    
Sbjct: 172 GDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTS-----------AGTVLAWGGNPF 220

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA 521
           G+LG      +  P  V           + G   +V LT  G V   G    GQLG+   
Sbjct: 221 GQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTV 280

Query: 522 KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            DRS   V           +++G  H   LT+ G V  WG N  GQLG G
Sbjct: 281 VDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 86/210 (40%), Gaps = 11/210 (5%)

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           S  +  +G   FG LG+G   N S P +V         ++A G  H+ A+          
Sbjct: 53  SDTILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALT--------- 103

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G +  WGD   G+LG   G   L P  V+          + GR  +V LT  G V 
Sbjct: 104 --AAGTVLAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVL 161

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G    GQLG+    DRS  V         V  +++G+ H   LTS G+V  WG N  G
Sbjct: 162 AWGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFG 221

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCG 596
           QLG G   +R TP  V       V +V  G
Sbjct: 222 QLGDGTVVDRSTPVAVALPPSTTVTAVAAG 251



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 20/220 (9%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG    G   G   DG+V    T V   LP          V  ++ G  H+  +T  
Sbjct: 212 VLAWG----GNPFGQLGDGTVVDRSTPVAVALPP------STTVTAVAAGGNHSVALTSA 261

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V  WG    G+LG    +D S P +V   +G+   +V+ G   + ALT +G +  WG+
Sbjct: 262 GTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGN 321

Query: 341 NNHG----ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           N  G              S  LP     T    R S+      H+  ++++G   ++G  
Sbjct: 322 NTFGQLGDGTTTTSSTPVSVTLPAATTITAISARDSQ------HSVAMTSAGAALSWGRN 375

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
             G LG G     S P +V    G+ V ++A G  H+ A+
Sbjct: 376 LRGQLGDGTTTTRSTPVDVHLPTGVTVTAIAAGDDHSLAL 415


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 137/278 (49%), Gaps = 34/278 (12%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK----------VNMD 301
           +P  +++   +++   ++G  H   V  +G  + WG  + G+ G +          +  D
Sbjct: 81  IPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRD 140

Query: 302 VSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
           +  P+   C S + V+ V+ G   +  LT+ G +++WG      D+      +   +P +
Sbjct: 141 IVIPQ--RCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPGDI------KQISVPVR 192

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL 421
           +   L+ VR+  +A G +H   +   G L+ +G+  +G LG G+ Q  SQP  V+ L GL
Sbjct: 193 V-QGLERVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGL 249

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVT 479
            +  +A G WH+ A+ D            G+++ WG  + GRLG  D ++  K++P  V 
Sbjct: 250 TLVDIAAGGWHSTALTD-----------DGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVN 298

Query: 480 RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            LV  D VQ SCG   +V LT  G++YT G   HG+LG
Sbjct: 299 LLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLG 336



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 33/320 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCG 322
           V+++  G++++  +  +G++F WG  + G LGH       + P  V+ L+ +N+   + G
Sbjct: 40  VRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIG 99

Query: 323 EFQTCALTKSGEIYTWGHNNHG--------ADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            +   A+   G  Y WG N +G         D  G    R   +P++    L    V +V
Sbjct: 100 GWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKL---VVRQV 156

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           A G  H+ +++  G ++++G         G+++ +S P  V+ L   +V+ +A G +H  
Sbjct: 157 AAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISVPVRVQGLE--RVRLIAVGAFHNL 210

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           A+ +            G L+ WG+ + G+LG  D + +  P  V  L     V  + G  
Sbjct: 211 ALQE-----------DGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGW 259

Query: 495 LTVGLTGLGKVYTMGSAVHGQLG---NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            +  LT  G+VY  G   HG+LG   N K+       V   + E+ V+ +S G  H   L
Sbjct: 260 HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQ-VSCGGTHSVAL 318

Query: 552 TSGGSVYTWGKNANGQLGLG 571
           T  G +YT+G+  +G+LG G
Sbjct: 319 TRDGRMYTFGRGDHGRLGYG 338



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 16/189 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ I++GA H   + ++G ++ WG  + G+LG       S P  V+ LSG+ +  ++ G 
Sbjct: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGG 258

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + + ALT  GE+Y WG   HG    G+    S  +P+++ + L G  + +V+CG  H+  
Sbjct: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRV-NLLVGEDIVQVSCGGTHSVA 317

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV--------------ESLRGLKVKSVACG 429
           ++  G+++T+G G  G LG+G      QP EV              ++ R +  K VA G
Sbjct: 318 LTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWI-AKLVASG 376

Query: 430 PWHTAAIVD 438
             HT AIV+
Sbjct: 377 GRHTLAIVE 385



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 144/340 (42%), Gaps = 35/340 (10%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           +  E  V  WG G+DG+LG   N +     +V+ L    V+SV  G   + A+   G+++
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLF 60

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           TWG N  G  L     +++  +P ++   L  V + + A G WH   V   G+ + +G  
Sbjct: 61  TWGWNQRGT-LGHPPETKTENIPSQV-KALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 397 TFGVLGHGN----------LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            +G  G              +++  P+   S   L V+ VA G  H+  +          
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASK--LVVRQVAAGGTHSVVLTRE------- 169

Query: 447 NAIGGKLFTWGDA-DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
               G +++WG     G +  +      +P  V  L     +  + G    + L   G +
Sbjct: 170 ----GHVWSWGQPWPPGDIKQIS-----VPVRVQGLERVRLI--AVGAFHNLALQEDGTL 218

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +  G+  +GQLG    + RS  +    L    +  I++G +H   LT  G VY WG+  +
Sbjct: 219 WAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEH 278

Query: 566 GQLGLGDSQE--RETPTFVEALRDRQVESVVCGSSITAAI 603
           G+LG GD+ +  +  P  V  L    +  V CG + + A+
Sbjct: 279 GRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVAL 318



 Score = 46.6 bits (109), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 32/49 (65%)

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           SV  WG   +GQLG+G+++E+E    V+AL   +V SVV GS  + AIC
Sbjct: 6   SVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAIC 54


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G   S+S          L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTCVKALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 3/119 (2%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           V  SCG   +  +TG  K+Y  GS   GQLG   K+     T V+  LK E VK  + G 
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKA-LKPEKVKLAACGR 96

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
            H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|301753052|ref|XP_002912363.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           Nek8-like [Ailuropoda melanoleuca]
          Length = 699

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 146/339 (43%), Gaps = 42/339 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN- 341
           V+ WG G        V      P L        V  V+ G  Q   +T+SG +  W  + 
Sbjct: 321 VYAWGGG--------VGPAXXLPML-----NTEVVQVAAGRTQKAGVTRSGRLILWEVSR 367

Query: 342 ---NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
                GA L G    +      +  +   GV +  VACG+  TA ++  G + T+G G+ 
Sbjct: 368 LGEGGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN 427

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LGHG+L ++SQP  VE+L G ++  VACG  H  A   +  +R        +LF WG 
Sbjct: 428 GCLGHGSLNDLSQPTIVEALLGYEMVQVACGASHVLA---LSTER--------ELFAWGR 476

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS-------A 511
            D GRLG    E    P  V+     +  +  CG   ++ LT  G     GS        
Sbjct: 477 GDSGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGGALACGSNRFNKLGL 536

Query: 512 VHGQLGNPKAKDRSI-------TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
            H  LG   A  + +        +    L +E +  +  G+ H A +T+ G  YT+G N 
Sbjct: 537 DHLSLGEESAPHQQVEEALSFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQ 596

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +GQLG    +    P  V+ L++ ++  V CG + T AI
Sbjct: 597 HGQLGTNARRVSRAPCQVQGLQNMKIVMVACGDAFTVAI 635



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 360 LILWEVSRLGEGGGALLPGAVEQQQPQ---FVSRFLEGQSGVTIKHVACGDLFTACLTDR 416

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 417 GIIMTFGSGSNGCLGHGSLNDLSQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 476

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R   SH  P+++     G    +V CG   + I++  G     G   F  
Sbjct: 477 GDSGRLGLGTR--ESHSCPQQV-SMPPGQEAQRVVCGIDSSMILTVPGGALACGSNRFNK 533

Query: 401 LG--HGNLQNVSQP-KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  H +L   S P ++VE    L    +   P     ++ + +    S A+   G  +T
Sbjct: 534 LGLDHLSLGEESAPHQQVE--EALSFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYT 591

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L +   V  +CG   TV +   G+VY+ G    G+
Sbjct: 592 FGSNQHGQLGTNARRVSRAPCQVQGLQNMKIVMVACGDAFTVAIGAEGEVYSWGKGARGR 651

Query: 516 LG 517
           LG
Sbjct: 652 LG 653



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 144/351 (41%), Gaps = 28/351 (7%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     GEG    L   V         + +E  SG+ 
Sbjct: 340 EVVQVAAGRTQKAGVTRSGRLILWEVSRLGEGGGALLPGAVEQQQPQFVSRFLEGQSGVT 399

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+  T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 400 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDLSQ---PTIVEALLGYEMVQVA 456

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 457 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVSMPPGQEAQRVVCG------ 510

Query: 436 IVDIMVDRCKSNAI--GGKLFTWGDADKGRLG-------HVDGERKLLPTCVTRLVDFDF 486
           I   M+      A+  G   F     D   LG        V+      P     L     
Sbjct: 511 IDSSMILTVPGGALACGSNRFNKLGLDHLSLGEESAPHQQVEEALSFTPLGSAPLDQEPL 570

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGS 545
           +    G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  ++ G 
Sbjct: 571 LSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQNMKIVMVACGD 629

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
                + + G VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 630 AFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 680



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 16/169 (9%)

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN---PKAKDRSITVVEG 531
           P     +++ + VQ + GR    G+T  G++     +  G+ G    P A ++       
Sbjct: 330 PAXXLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEVSRLGEGGGALLPGAVEQQQPQFVS 389

Query: 532 KLKEE----FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           +  E      +K ++ G    A LT  G + T+G  +NG LG G   +   PT VEAL  
Sbjct: 390 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDLSQPTIVEALLG 449

Query: 588 RQVESVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            ++  V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 450 YEMVQVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 492


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 42/370 (11%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN---VQSV 319
           ++++++ G  H   VT++G+++  G    G+LGH       C   ++ + G+    + SV
Sbjct: 55  NIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHD-----GCRTKLQKIPGVESLVMTSV 109

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           +CGE  + AL + G++YTWG ++ G   +G           K+  TL  + + +++CG  
Sbjct: 110 ACGEAHSMALNEWGQLYTWGSDSCGQ--LGLETDEGIQYKPKIVKTLASMLLVQISCGYK 167

Query: 380 HTAIVSTSGQLFTYGDGTF-GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           H   ++  G+L+T+G   F  +       NVS+P  V SL GL +  +ACG +H+  +  
Sbjct: 168 HCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV-- 225

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC---VTRLVDFDFVQASCGRML 495
                    +  G +F WG  D G+LG ++ +  L         R V   ++    G   
Sbjct: 226 ---------SKSGAVFGWGKNDFGQLG-INSQTSLSSPAQLKTIRTVKVKYIAG--GEDF 273

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT-SG 554
           +V LT  G V+T G+ ++GQLG+    +  +     +L    V  ++ G  H   L  S 
Sbjct: 274 SVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSK 333

Query: 555 GSVYTWGKNANGQLGLGDSQERETP-------------TFVEALRDRQVESVVCGSSITA 601
           G VY++G  + GQLG   S    TP             + +E  +   V+S+  G     
Sbjct: 334 GRVYSFGLGSVGQLGTKSSINSNTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAGGDQCF 393

Query: 602 AICLHKSISV 611
               HKS+ +
Sbjct: 394 VRVTHKSLDI 403



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 18/264 (6%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGI 314
           +ES VM    +++ G  H+  + + G+++ WG    G+LG + +  +   PK+V+ L+ +
Sbjct: 101 VESLVM---TSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQYKPKIVKTLASM 157

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            +  +SCG     ALT  GE+YTWG N  G   +G            L ++L G+ +S +
Sbjct: 158 LLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVS--KPTLVNSLVGLPISFI 215

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           ACG +H+ +VS SG +F +G   FG LG  +  ++S P +++++R +KVK +A G     
Sbjct: 216 ACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGE---- 271

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
                  D        G +FT G    G+LGH     +++P  V  L+     Q +CGR 
Sbjct: 272 -------DFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRR 324

Query: 495 LTVGLT-GLGKVYTMGSAVHGQLG 517
            T+ L    G+VY+ G    GQLG
Sbjct: 325 HTLTLVPSKGRVYSFGLGSVGQLG 348



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 111/215 (51%), Gaps = 16/215 (7%)

Query: 253 PKLLES-AVMLDVQNISLGAKHAALVTKEGEVFCWGEGK-DGRLGHKVNMDVSCPKLVEC 310
           PK++++ A ML VQ IS G KH   +T  GE++ WG  +           +VS P LV  
Sbjct: 148 PKIVKTLASMLLVQ-ISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNS 206

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L G+ +  ++CG + +  ++KSG ++ WG N+ G   +  + S S   P +L  T+  V+
Sbjct: 207 LVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSS--PAQL-KTIRTVK 263

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +A GE  +  ++  G +FT G G +G LGHG+  N   P++V  L G  V  V CG 
Sbjct: 264 VKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGR 323

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            HT  +V             G+++++G    G+LG
Sbjct: 324 RHTLTLV----------PSKGRVYSFGLGSVGQLG 348



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 21/319 (6%)

Query: 283 VFCWGEGKDGRLGH---KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           ++CWG   +G LG    + N  +S  ++V   S  N++SV+CG   T A+T+ G++Y  G
Sbjct: 20  MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            N+ G       R++   +P      ++ + ++ VACGE H+  ++  GQL+T+G  + G
Sbjct: 80  SNDFGQLGHDGCRTKLQKIPG-----VESLVMTSVACGEAHSMALNEWGQLYTWGSDSCG 134

Query: 400 VLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            LG    + +  +PK V++L  + +  ++CG  H  A+ +            G+L+TWG 
Sbjct: 135 QLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTN-----------HGELYTWGS 183

Query: 459 ADKGRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            + G+LG   G   +  PT V  LV       +CG   +  ++  G V+  G    GQLG
Sbjct: 184 NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLG 243

Query: 518 NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
                  S       ++   VK I+ G      LT  G V+T G    GQLG G      
Sbjct: 244 INSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEI 303

Query: 578 TPTFVEALRDRQVESVVCG 596
            P  V  L    V  V CG
Sbjct: 304 VPRKVLELMGSTVTQVTCG 322



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 25/276 (9%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
           +Y WG+  +G   +G         P ++  F++++ ++   VACG  HT  V+  GQL+ 
Sbjct: 20  MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIK--SVACGNNHTLAVTEDGQLYA 77

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            G   FG LGH   +  ++ +++  +  L + SVACG  H+ A+ +            G+
Sbjct: 78  CGSNDFGQLGHDGCR--TKLQKIPGVESLVMTSVACGEAHSMALNE-----------WGQ 124

Query: 453 LFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           L+TWG    G+LG   D   +  P  V  L     VQ SCG    + LT  G++YT GS 
Sbjct: 125 LYTWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS- 183

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFV----KGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
              + G          V +  L    V      I+ G YH  V++  G+V+ WGKN  GQ
Sbjct: 184 --NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQ 241

Query: 568 LGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           LG+       +P  ++ +R  +V+ +  G   +  +
Sbjct: 242 LGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFL 277



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 16/180 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P L+ S V L +  I+ G  H+ +V+K G VF WG+   G+LG      +S P  ++ + 
Sbjct: 201 PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIR 260

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            + V+ ++ GE  +  LT  G ++T G   +G   +G     +  +PRK+ + L G  V+
Sbjct: 261 TVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQ--LGHGSFSNEIVPRKVLE-LMGSTVT 317

Query: 373 KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           +V CG  HT  +V + G+++++G G+ G LG  +  N + P+ V             GPW
Sbjct: 318 QVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV------------LGPW 365


>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
          Length = 1011

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 150/365 (41%), Gaps = 47/365 (12%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V N+  G   A ++T  G ++ WG    G+LG     D   P  +  L    +  ++CG+
Sbjct: 223 VSNVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGK 282

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL + G +Y WG  N     +G  ++    LP  +    D V+V  +ACG+ H+  
Sbjct: 283 DHSLALDEIGCVYAWG--NGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMA 340

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           V   G++F++G   FG LG+ N     S P+ VES+     K V+CG WH+  + +    
Sbjct: 341 VCQDGRVFSWGQAGFGKLGYSNPMGFQSTPRRVESIPA--CKQVSCGNWHSLTLTN---- 394

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                  GG ++ +G   +GR G      +  P  V    +    +   G      LT  
Sbjct: 395 -------GGDVYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTS 447

Query: 503 GKVYTMGSAVHGQLG--------------NPKAKDRSITVVEGKLKEEF----------- 537
             +YT G+   GQLG              N    +  I+V    L + +           
Sbjct: 448 NMIYTWGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLL 507

Query: 538 ---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF--VEALRDRQVES 592
              +  I  G  HV VLT  G V T+G N   QLG G+   R+  TF  VE      V  
Sbjct: 508 PYPINNIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGELL-RDAGTFRKVEIQNKSTVFK 566

Query: 593 VVCGS 597
           +  G+
Sbjct: 567 IAAGN 571



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 141/331 (42%), Gaps = 56/331 (16%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG-INVQSVSCG 322
           +  I+ G  H+  + + G V+ WG G  GRLG      VS P +V      + V  ++CG
Sbjct: 275 ITQIACGKDHSLALDEIGCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACG 334

Query: 323 EFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +  + A+ + G +++WG    G    ++ +G + +     PR++ +++   +  +V+CG 
Sbjct: 335 QDHSMAVCQDGRVFSWGQAGFGKLGYSNPMGFQST-----PRRV-ESIPACK--QVSCGN 386

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
           WH+  ++  G ++ +G    G  G       S P  V     +K+K +  G    A +  
Sbjct: 387 WHSLTLTNGGDVYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLT- 445

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLG----------------------------HVDGE 470
                  SN I    +TWG+ DKG+LG                             ++  
Sbjct: 446 ------TSNMI----YTWGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDT 495

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-- 528
              +P  V  L+ +       G    V LT  G+V T GS    QLG+ +    + T   
Sbjct: 496 YTYVPQLVKTLLPYPINNIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGELLRDAGTFRK 555

Query: 529 VEGKLKEEFVKGISSGSYHVAV-LTSGGSVY 558
           VE + K    K I++G+Y   V L+SG S++
Sbjct: 556 VEIQNKSTVFK-IAAGNYASLVSLSSGHSIF 585



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 17/236 (7%)

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           VS V  G     +++ +G ++++G  ++G LG  +  +   P ++  L+  ++  +ACG 
Sbjct: 223 VSNVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGK 282

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-FDFVQA 489
            H+ A+ +I           G ++ WG+   GRLG    +   LPT V    D    V  
Sbjct: 283 DHSLALDEI-----------GCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGI 331

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           +CG+  ++ +   G+V++ G A  G+LG  NP     +   VE        K +S G++H
Sbjct: 332 ACGQDHSMAVCQDGRVFSWGQAGFGKLGYSNPMGFQSTPRRVESI---PACKQVSCGNWH 388

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              LT+GG VY +G N  G+ G   +     P  V    + +++ +  G +  A +
Sbjct: 389 SLTLTNGGDVYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVL 444



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 113/276 (40%), Gaps = 56/276 (20%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G  GG +G         NKT V +L   +      + V  I+ G  H+  V ++
Sbjct: 294 VYAWGNGA-GGRLG--------LNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQD 344

Query: 281 GEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G VF WG+   G+LG+   M   S P+ VE +     + VSCG + +  LT  G++Y +G
Sbjct: 345 GRVFSWGQAGFGKLGYSNPMGFQSTPRRVESIPA--CKQVSCGNWHSLTLTNGGDVYAFG 402

Query: 340 HNNHGADLVGERRSRSHWLP-RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD--- 395
            N  G    G   +     P R +FD    +++ K+  G    A+++TS  ++T+G+   
Sbjct: 403 SNREGR--CGRELTTVESPPNRVIFDA--NIKIKKIGAGLNFNAVLTTSNMIYTWGNNDK 458

Query: 396 GTFGVL-------------------------GHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           G  GVL                            N      P+ V++L    + ++  G 
Sbjct: 459 GQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLPYPINNIEVGY 518

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH 466
            H   + D            G++ T+G     +LGH
Sbjct: 519 EHVVVLTD-----------AGEVITFGSNQMDQLGH 543



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 1/114 (0%)

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           G    + LT  G +Y+ G   +G+LG     D  I     +LK + +  I+ G  H   L
Sbjct: 229 GGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLAL 288

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAIC 604
              G VY WG  A G+LGL  +     PT V    D+ +V  + CG   + A+C
Sbjct: 289 DEIGCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVC 342



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 18/112 (16%)

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           G+M T  L+ LGKV T           P+      TV+    +E  V  +  G     +L
Sbjct: 195 GQMFTTQLS-LGKVST-----------PQ------TVLFNHHQEHGVSNVQFGGNFALML 236

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           T  G +Y+WG  + G+LG     +   P+ +  L+++Q+  + CG   + A+
Sbjct: 237 TDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLAL 288



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVEC 310
           +P+L+++ +   + NI +G +H  ++T  GEV  +G  +  +LGH ++  D    + VE 
Sbjct: 499 VPQLVKTLLPYPINNIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGELLRDAGTFRKVEI 558

Query: 311 LSGINVQSVSCGEFQTCALTKSGE 334
            +   V  ++ G + +     SG 
Sbjct: 559 QNKSTVFKIAAGNYASLVSLSSGH 582


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 14/104 (13%)

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL--KEEFVKGISSGSYHVAVLTSGGS 556
           +  LG V+T G +   +  NP           GK   K +    +S G  H AV+T    
Sbjct: 8   MPDLGAVFTFGKSKFAE-NNP-----------GKFWFKNDVPVHLSCGDEHSAVVTGNNK 55

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           +Y +G N  GQLGLG       PT V+AL+  +V+   CG + T
Sbjct: 56  LYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 167/346 (48%), Gaps = 42/346 (12%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G +H  LVT  G+++ +G    G+LG +    +S P  V+ L    V   SCG   
Sbjct: 41  HISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNH 100

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G++Y+ G N+ G   +G+   R+ +     F+T    ++ +++ G   +A ++
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQ--YKIKQLSAGSNTSAALT 158

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G LG       S P++++   G  +  ++CG +H+A +         
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYHSAFVTQ------- 209

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G+L+T+G+ + G+LG    + K    P  V+ L     +  SCG   T+ +T   
Sbjct: 210 ----DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTE-K 263

Query: 504 KVYTMGSAVHGQLGN---------PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           +VYT G    GQLG+         PKA D         L ++ +  ++ G  H AV+T  
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVDV--------LTKKTILYVTCGENHTAVITDK 315

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEAL----RDRQVESVVCG 596
           G +YT+G   +G+LGLG  +E  T  FV  L        V+SV CG
Sbjct: 316 GLLYTFGDGRHGKLGLG--EENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 19/232 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T +G++F WG+  +G+LG +     S P+ ++   G  +  +SCG 
Sbjct: 144 IKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGY 201

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + +  +T+ GE+YT+G   +G   +   + + H  P+++   L G +V  V+CG  HT I
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRV-SGLSG-KVKIVSCGGEHT-I 258

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
             T  +++T+G G FG LGHG     +Q PK V+ L    +  V CG  HTA I D    
Sbjct: 259 AVTEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD---- 314

Query: 443 RCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                   G L+T+GD   G+  LG  +   + +P   +  + F     +CG
Sbjct: 315 -------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 93/180 (51%), Gaps = 28/180 (15%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG--------HKVNMDVSCPKLVECLSGINVQS 318
           IS G  H+A VT++GE++ +GE ++G+LG        HK       P+ V  LSG  V+ 
Sbjct: 197 ISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKK------PQRVSGLSG-KVKI 249

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           VSCG   T A+T+  E+YT+G    G       + E +     LP+ + D L    +  V
Sbjct: 250 VSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETQ-----LPKAV-DVLTKKTILYV 302

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
            CGE HTA+++  G L+T+GDG  G LG G  N  N   P    +     V+SVACG  H
Sbjct: 303 TCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCH 362



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 34/68 (50%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           LK +    IS G  H  ++T  G +Y +G N  GQLGL        PT V+AL+  +V  
Sbjct: 34  LKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVF 93

Query: 593 VVCGSSIT 600
             CG + T
Sbjct: 94  ASCGRNHT 101


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR---------LGHKVNMDV 302
           +P  +++   + +   ++G  H   V  +G  + WG  + G+         +G  V  D+
Sbjct: 81  IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
             PK   C   + V+ V+ G   +  LT+ G ++TWG                 W P  +
Sbjct: 141 VIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP---------------WPPGDI 183

Query: 363 FDTLDGVRV------SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
                 VRV      S +A G +H   +   G+L  +G+  +G LG G+ Q  S P  V 
Sbjct: 184 KQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVH 243

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLL 474
            L  L +  +A G WH+ A+ D            G+++ WG  + GRLG  D ++  K++
Sbjct: 244 GLDDLTLVDIAAGGWHSTALTDK-----------GEVYGWGRGEHGRLGFGDNDKSSKMV 292

Query: 475 PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           P  V  L + D +Q SCG   +V LT  G++++ G   HG+LG
Sbjct: 293 PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 167/384 (43%), Gaps = 48/384 (12%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSG 313
           ++E+     V+++  G++++  +  +G +F WG  + G LGH       + P  V+ L+ 
Sbjct: 31  VVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALAN 90

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHG-------ADLVGERRSRSHWLPRKLFDTL 366
           + +   + G +   A+   G  Y WG N +G        D +G    R   +P++    L
Sbjct: 91  VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL 150

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
               V +VA G  H+ +++  G ++T+G         G+++ +  P  V+ L  + +  +
Sbjct: 151 ---TVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQIFVPVRVQGLENVSI--I 201

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           A G +H  A+ +            G+L  WG+ + G+LG  D +    P  V  L D   
Sbjct: 202 AVGAFHNLALEE-----------DGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTL 250

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK---LKEEFVKGISS 543
           V  + G   +  LT  G+VY  G   HG+LG     D+S  +V  K   L EE +  +S 
Sbjct: 251 VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGF-GDNDKSSKMVPQKVNLLAEEDIIQVSC 309

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLG----DSQERETPTFVEALR------DRQVES- 592
           G  H   LT  G ++++G+  +G+LG G      Q  E P  +          D + E  
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGK 369

Query: 593 -----VVCGSSITAAICLHKSISV 611
                + CG   T AI   KS  +
Sbjct: 370 WSAKWIACGGRHTLAIVEWKSDDI 393



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 32/332 (9%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           +  WG G+DG+LG   N +     +VE L   +V+SV  G   + A+   G ++TWG N 
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G  L     +++  +P ++   L  V++++ A G WH   V   G+ + +G   +G  G
Sbjct: 67  RGT-LGHPPETKTENIPSRV-KALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 403 HGNLQN---------VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
              L++         +  PK       L V+ VA G  H+  +              G +
Sbjct: 125 EEPLKDEMGRPVRRDIVIPKRCAPK--LTVRQVAAGGTHSVVLTRE-----------GHV 171

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           +TWG          D ++  +P  V  L +   +  + G    + L   G++   G+  +
Sbjct: 172 WTWGQP----WPPGDIKQIFVPVRVQGLENVSII--AVGAFHNLALEEDGRLLAWGNNEY 225

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG    +  S  V    L +  +  I++G +H   LT  G VY WG+  +G+LG GD+
Sbjct: 226 GQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDN 285

Query: 574 QE--RETPTFVEALRDRQVESVVCGSSITAAI 603
            +  +  P  V  L +  +  V CG + + A+
Sbjct: 286 DKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           + S  S+  WG   +GQLG+G ++E+E    VEAL    V SVV GS  + AIC
Sbjct: 1   MVSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAIC 54


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGNPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLV-SEIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 167/346 (48%), Gaps = 42/346 (12%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           +IS G +H  LVT  G+++ +G    G+LG +    +S P  V+ L    V   SCG   
Sbjct: 41  HISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNH 100

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G++Y+ G N+ G   +G+   R+ +     F+T    ++ +++ G   +A ++
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQ--YKIKQLSAGSNTSAALT 158

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G LG       S P++++   G  +  ++CG +H+A +         
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKID--IGKPISWISCGYYHSAFVTQ------- 209

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G+L+T+G+ + G+LG    + K    P  V+ L     +  SCG   T+ +T   
Sbjct: 210 ----DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTE-K 263

Query: 504 KVYTMGSAVHGQLGN---------PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           +VYT G    GQLG+         PKA D         L ++ +  ++ G  H AV+T  
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVDV--------LTKKTILYVTCGENHTAVITDK 315

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEAL----RDRQVESVVCG 596
           G +YT+G   +G+LGLG  +E  T  FV  L        V+SV CG
Sbjct: 316 GLLYTFGDGRHGKLGLG--EENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 19/232 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T +G++F WG+  +G+LG +     S P+ ++   G  +  +SCG 
Sbjct: 144 IKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGY 201

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + +  +T+ GE+YT+G   +G   +   + + H  P+++   L G +V  V+CG  HT I
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRV-SGLSG-KVKIVSCGGEHT-I 258

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
             T  +++T+G G FG LGHG     +Q PK V+ L    +  V CG  HTA I D    
Sbjct: 259 AVTEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD---- 314

Query: 443 RCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                   G L+T+GD   G+  LG  +   + +P   +  + F     +CG
Sbjct: 315 -------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 93/180 (51%), Gaps = 28/180 (15%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG--------HKVNMDVSCPKLVECLSGINVQS 318
           IS G  H+A VT++GE++ +GE ++G+LG        HK       P+ V  LSG  V+ 
Sbjct: 197 ISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKK------PQRVSGLSG-KVKI 249

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHG----ADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           VSCG   T A+T+  E+YT+G    G       + E +     LP+ + D L    +  V
Sbjct: 250 VSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETQ-----LPKAV-DVLTKKTILYV 302

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
            CGE HTA+++  G L+T+GDG  G LG G  N  N   P    +     V+SVACG  H
Sbjct: 303 TCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCH 362



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 32/285 (11%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G +    ++           P K +  L   R + ++CG+ HT +V+ +G+L+
Sbjct: 13  SGALFTFGKSKFAENI-----------PSKFW--LKNDRPAHISCGDEHTVLVTGNGKLY 59

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            +G   +G LG      +S+P  V++L+  KV   +CG  HT    +            G
Sbjct: 60  VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTE-----------QG 108

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRL-VDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           KL++ G   +G+LG  D   +     ++     +   Q S G   +  LT  GK++  G 
Sbjct: 109 KLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGD 168

Query: 511 AVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              GQLG  K    +I     K+   + +  IS G YH A +T  G +YT+G+  NG+LG
Sbjct: 169 NSEGQLGLEK---EAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG 225

Query: 570 LGDS--QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
           L     ++ + P  V  L  + V+ V CG   T A+   +  + G
Sbjct: 226 LPSDKLKKHKKPQRVSGLSGK-VKIVSCGGEHTIAVTEKEVYTFG 269


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 102/201 (50%), Gaps = 15/201 (7%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           S G +H A +T++GEV+ WG GK+G LGH     V  PK VE LS  N+  + CG   T 
Sbjct: 260 SCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLS--NIVKIDCGMDYTF 317

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           AL K G IY+WG N +G     +     H +P +L        V  ++CGE H+A ++  
Sbjct: 318 ALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDK 377

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+ F +G G  G LGH    N++QPK++E    L  + V CG  HT  I           
Sbjct: 378 GEAFIWGYGNDGQLGHKEKTNLNQPKKLEFTEPL--RRVVCGGGHTGVIT---------- 425

Query: 448 AIGGKLFTWGDADKGRLGHVD 468
              GKLF +G    G+LG  D
Sbjct: 426 -TAGKLFLFGRGRDGQLGRGD 445



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 172/386 (44%), Gaps = 43/386 (11%)

Query: 243 QNK-TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFC-WGEGKDGRLGH-KVN 299
           QNK +++ A    L+    +L  Q++S   ++A    K+ ++   WG G++G+LG+    
Sbjct: 57  QNKYSRILAGSATLIGGMFLLKNQSMSFKLQNAECDAKQQKLLLSWGNGQNGQLGNGNET 116

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP 359
           + +S P  V+ LS  ++  V+     + A+T  G+IYTWG    G+    +  SR+  L 
Sbjct: 117 LSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRGGSLSQQKSLSRATNLL 176

Query: 360 RKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH-GNLQNVSQPKEVE-- 416
                    V+  +VACG+ H A V+  G+L T+G+   G LGH   LQ  S+ K     
Sbjct: 177 LPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPR 236

Query: 417 -------------SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
                        +L   K+   +CG  HTA +              G+++TWG    G 
Sbjct: 237 SYADYNAINFVGGALESKKIIQASCGFQHTACLTQ-----------DGEVYTWGFGKNGA 285

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           LGH + ++  LP  V  L +   V+  CG   T  L   G +Y+ GS  +GQLG  ++  
Sbjct: 286 LGHGNWDQVDLPKKVEGLSNI--VKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQSNI 343

Query: 524 RSITV-VEGKLKE--EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
               V ++ +L      V  IS G  H A L   G  + WG   +GQLG  +      P 
Sbjct: 344 NKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPK 403

Query: 581 ---FVEALRDRQVESVVCGSSITAAI 603
              F E LR      VVCG   T  I
Sbjct: 404 KLEFTEPLR-----RVVCGGGHTGVI 424



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 172/376 (45%), Gaps = 48/376 (12%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +      +   +P  ++     D+  ++     +A VT +G+++ WG+ + G 
Sbjct: 103 GNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRGGS 162

Query: 294 LGHKVNMDVSCPKLVECL---SGINVQSVSCGEFQTCALTKSGEIYTWGHNN-----HGA 345
           L  + ++  +   L+  L     +    V+CG+     +TK G++ TWG+ +     H A
Sbjct: 163 LSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNA 222

Query: 346 DLVGERRSRSHWLPRKLFD---------TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
            L  E +++S + PR   D          L+  ++ + +CG  HTA ++  G+++T+G G
Sbjct: 223 QLQQESKNKS-YSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFG 281

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTW 456
             G LGHGN   V  PK+VE L    +  + CG  +T A+     D+       G +++W
Sbjct: 282 KNGALGHGNWDQVDLPKKVEGLS--NIVKIDCGMDYTFAL-----DK------DGNIYSW 328

Query: 457 GDADKGRLGHVDGE--------RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
           G    G+LG             +  LP   + +VD      SCG   +  L   G+ +  
Sbjct: 329 GSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDI-----SCGEEHSAFLNDKGEAFIW 383

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLK-EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
           G    GQLG+   K+++      KL+  E ++ +  G  H  V+T+ G ++ +G+  +GQ
Sbjct: 384 GYGNDGQLGH---KEKTNLNQPKKLEFTEPLRRVVCGGGHTGVITTAGKLFLFGRGRDGQ 440

Query: 568 LGLGDSQERETPTFVE 583
           LG GD  E      +E
Sbjct: 441 LGRGDVNESMAAFRIE 456


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 169/363 (46%), Gaps = 44/363 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG     DV  P  V+ L    VQ  +CG   T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
             LT  G +Y  G NN G   +G+   R+ +     F +   ++  +++ G   +A +S 
Sbjct: 100 LILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIK--QLSAGSNTSAALSE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  ++ +V  P +V    G  +  ++CG +H+A +          
Sbjct: 158 DGRLFMWGDNSEGQIGLNDVISVCVPHQVN--IGKPISWISCGYYHSAFV---------- 205

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
             + G+L+T+G+ + G+LG     ++LL     P  V  + +   +Q +CG   TV LT 
Sbjct: 206 -TMDGELYTFGEPESGKLGL---PKELLINHRTPQLVAGIPE-KVIQVACGGGHTVVLTE 260

Query: 502 LGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              VYT G    GQLG          PK       V+E ++K + +  IS G  H A+++
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFCFETLEPK-------VIE-QIKNQKITYISCGENHTALIS 311

Query: 553 SGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSIS 610
             G +YT+G   +G+LGLG  +   +  P          V+ V CG   T      +   
Sbjct: 312 DIGLMYTFGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFAAPRIDV 371

Query: 611 VGD 613
           VG+
Sbjct: 372 VGE 374



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            K +    +S G  H AV+T    +Y +G N  GQLGLG   + + PT V+AL+  +V+ 
Sbjct: 32  FKNDIPMYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQF 91

Query: 593 VVCGSSITAAICL 605
             CG + T  + +
Sbjct: 92  AACGRNHTLILTV 104


>gi|405968936|gb|EKC33959.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 1493

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 144/312 (46%), Gaps = 36/312 (11%)

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           +E    I ++  + GE     +T   ++Y+WG  + G   +G     S   P +L  +L+
Sbjct: 544 IELPPKIKIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQ--LGHGNMESKMKP-ELVQSLN 600

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
           G  +S+  CGE  +   S +G + T GDGT G LGHG+  +  +P+ +E+L  L V +++
Sbjct: 601 GKSISRACCGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAIS 660

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  H                  G++ TWG    GRLG    +    P  +         
Sbjct: 661 CGSKHVVV-----------VGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVVIR 709

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSI------TVVEGK------- 532
              CG   T+ LT +G VY  GS    +LG  N +    ++      T VEG        
Sbjct: 710 DVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSNVPTPVR 769

Query: 533 -LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            L    V GIS G+ H AV+   G +YT+GKN+ GQLG+GD++    P  V+A+    +E
Sbjct: 770 ALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAM----LE 825

Query: 592 S--VVCGSSITA 601
           S  V CG+  T 
Sbjct: 826 SVRVQCGNHYTV 837



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 164/360 (45%), Gaps = 23/360 (6%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGI 314
           +E    + +++ ++G  H  +VT E +V+ WG G  G+LGH  NM+    P+LV+ L+G 
Sbjct: 544 IELPPKIKIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHG-NMESKMKPELVQSLNGK 602

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           ++    CGE  +   + +G + T G    G   +G   + S + PR L +TL  + V  +
Sbjct: 603 SISRACCGEGFSIFASDNGIVLTCGDGTSGC--LGHGDTLSCYRPR-LIETLLSLDVIAI 659

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           +CG  H  +V + G++ T+G G  G LG G   N  QP+E+     + ++ V CG   T 
Sbjct: 660 SCGSKHVVVVGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVVIRDVFCGVDGTM 719

Query: 435 AIVDI-MVDRCKSNAIGGKL-------FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
            + D+  V  C SN+   KL       F    A K      + E   +PT V  L     
Sbjct: 720 FLTDVGSVYACGSNS-DNKLGLNNRQGFIM--AMKNIFTKTEVEGSNVPTPVRALARHRV 776

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           +  S G   T  +   G +YT G    GQLG    K  S   VE K   E V+ +  G++
Sbjct: 777 LGISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDTKP-SRAPVEVKAMLESVR-VQCGNH 834

Query: 547 HVAVLTSGGSVYTWG----KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           +    T+   +Y WG          L   DS+   T +FV    D ++ESV   S  T A
Sbjct: 835 YTVCSTTSNELYYWGLRNKTPVQTYLQDNDSKSSTTDSFVNN-NDLRLESVTPRSGTTKA 893



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 26/218 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E+ + LDV  IS G+KH  +V  EGEV  WG G DGRLG     +   P+ +    
Sbjct: 645 PRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEE 704

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT------- 365
            + ++ V CG   T  LT  G +Y  G N+     +  R+     +      T       
Sbjct: 705 PVVIRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSNV 764

Query: 366 ------LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
                 L   RV  ++ G  HTA++   G ++T+G  + G LG G+ +    P EV+++ 
Sbjct: 765 PTPVRALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAM- 823

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            L+   V CG  +T          C + +   +L+ WG
Sbjct: 824 -LESVRVQCGNHYTV---------CSTTS--NELYYWG 849



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 129/308 (41%), Gaps = 44/308 (14%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           K V  WG     GD G    G++         + P+L++S     +     G   +   +
Sbjct: 569 KQVYSWG----SGDKGQLGHGNMESK------MKPELVQSLNGKSISRACCGEGFSIFAS 618

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
             G V   G+G  G LGH   +    P+L+E L  ++V ++SCG      +   GE+ TW
Sbjct: 619 DNGIVLTCGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTW 678

Query: 339 GHNNHGAD-LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           G    GAD  +G     +H  P++L    + V +  V CG   T  ++  G ++  G  +
Sbjct: 679 G---CGADGRLGLGTEDNHCQPQEL-RIEEPVVIRDVFCGVDGTMFLTDVGSVYACGSNS 734

Query: 398 FGVLGHGN-------LQNVSQPKEVES------LRGL---KVKSVACGPWHTAAIVDIMV 441
              LG  N       ++N+    EVE       +R L   +V  ++ G  HTA IV+   
Sbjct: 735 DNKLGLNNRQGFIMAMKNIFTKTEVEGSNVPTPVRALARHRVLGISMGACHTAVIVE--- 791

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    G ++T+G   +G+LG  D +    P  V  +   + V+  CG   TV  T 
Sbjct: 792 --------PGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAM--LESVRVQCGNHYTVCSTT 841

Query: 502 LGKVYTMG 509
             ++Y  G
Sbjct: 842 SNELYYWG 849


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 28/312 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   T
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++ 
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQH--KIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  ++ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 158 DGELFMWGDNSEGQIGLKDVTNVCVPQQV--TVGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL------VDFDFVQASCGRMLTVGLT 500
               G+L+T+G+ + G+LG  +   +LL  C  R+      +    VQ +CG   TV LT
Sbjct: 207 --TEGELYTFGEPESGKLGLPN---QLL--CNHRMPQPVPGIPEKVVQVACGGGHTVVLT 259

Query: 501 GLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
               VYT G    GQLG      + S+  V   +K++ +  IS G  H A++T  G +YT
Sbjct: 260 EKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYT 318

Query: 560 WGKNANGQLGLG 571
           +G    G+LGLG
Sbjct: 319 FGDGRYGKLGLG 330



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 21/245 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G K   +V  P+ V    G  +  +SCG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTV--GKPISWISCGY 199

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + +  +T  GE+YT+G    G   +  +   +H +P+ +    +  +V +VACG  HT +
Sbjct: 200 YHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPE--KVVQVACGGGHT-V 256

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           V T   ++T+G G FG LG G  L   S PK +E ++  K+ S++CG  HTA I DI   
Sbjct: 257 VLTEKAVYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDI--- 313

Query: 443 RCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG--RMLTVG 498
                   G ++T+GD   G+  LG  +   + LPT  +  + F     SCG   ML   
Sbjct: 314 --------GLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHMLVFA 365

Query: 499 LTGLG 503
           +  LG
Sbjct: 366 VPRLG 370



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 140/318 (44%), Gaps = 64/318 (20%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G      ++           P K +   D   V  ++CG+ HTA+V+ + +L+
Sbjct: 11  SGAVFTFGKTRFAENI-----------PSKFWFKNDIPTV--LSCGDEHTAVVTGNKKLY 57

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA---------------- 435
            +G   +G LG G+   VS+P  V++L+  KVK  ACG  HT                  
Sbjct: 58  MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117

Query: 436 --------------IVDIMVDRCKSNAIG------------GKLFTWGDADKGRLGHVDG 469
                         ++     + K   +             G+LF WGD  +G++G  D 
Sbjct: 118 QLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDV 177

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA---KDRSI 526
               +P  VT      ++  SCG   +  +T  G++YT G    G+LG P       R  
Sbjct: 178 TNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMP 235

Query: 527 TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFVEAL 585
             V G + E+ V+ ++ G  H  VLT   +VYT+G    GQLGLG    E   P  +E +
Sbjct: 236 QPVPG-IPEKVVQ-VACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSVPKVIEHV 292

Query: 586 RDRQVESVVCGSSITAAI 603
           +D+++ S+ CG + TA I
Sbjct: 293 KDQKISSISCGENHTALI 310



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 31/291 (10%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +G     +VS+  T V AL P+ ++ A        + G  H  + T+ G+V+  G   
Sbjct: 65  GQLGLGSKSTVSK-PTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKVYAAGGNN 115

Query: 291 DGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
           +G+LG     + +   L+   +  + ++ +S G   + ALT+ GE++ WG N+ G   +G
Sbjct: 116 EGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQ--IG 173

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQ 407
            +   +  +P+++     G  +S ++CG +H+A V+T G+L+T+G+   G LG  N  L 
Sbjct: 174 LKDVTNVCVPQQV---TVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLC 230

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-H 466
           N   P+ V  +   KV  VACG  HT  + +  V            +T+G    G+LG  
Sbjct: 231 NHRMPQPVPGIPE-KVVQVACGGGHTVVLTEKAV------------YTFGLGQFGQLGLG 277

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                  +P  +  + D      SCG   T  +T +G +YT G   +G+LG
Sbjct: 278 TFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLG 328


>gi|441515372|ref|ZP_20997174.1| hypothetical protein GOAMI_45_00160 [Gordonia amicalis NBRC 100051]
 gi|441449839|dbj|GAC55135.1| hypothetical protein GOAMI_45_00160 [Gordonia amicalis NBRC 100051]
          Length = 747

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 148/327 (45%), Gaps = 32/327 (9%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           ++G  +CWG+ + G+LG     +   P  V  LSG  V S++ G   +CA+  +G  Y W
Sbjct: 421 RDGTAYCWGDNQAGQLGDGTTTNRWKPTRVADLSG--VTSITTGGPDSCAI-AAGVAYCW 477

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G+N++G   +G+  + S W P ++ D  D   V+ ++   W T  +S +G  + +G   F
Sbjct: 478 GNNDYGQ--IGDGTTTSRWKPTRVADLTD---VTAISTANWATCAIS-AGLAYCWGTNDF 531

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             LG G+  N  +P  V  L    V S++ G   T A+             GG  + WG 
Sbjct: 532 DQLGDGSTANQYRPVRVAGLE--DVTSISVGVNFTCAVA------------GGDAYCWGL 577

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            D G++G      +  PT   R+ D D   +             G  Y  G+   GQLG+
Sbjct: 578 NDNGQVGDGTTYNQSKPT---RVADLDAATSVSAGAQAACAIAGGSAYCWGNNAFGQLGD 634

Query: 519 PKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
              + R+  T V G    + V GIS+G+ H     +G + Y WG NA G +G G   +R 
Sbjct: 635 GTKESRTTATQVSGV---DGVTGISTGTGHTTCAIAGAAGYCWGANAWGSVGYGTLTDRP 691

Query: 578 TPTFVEALRDRQVESVVCGSSITAAIC 604
            PT +  L D  V ++  G   T A+ 
Sbjct: 692 NPTRLNGLSD--VTAISAGERTTCALA 716



 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
            +CWG    G+LG       +    V  + G+   S   G   TCA+  +   Y WG N 
Sbjct: 621 AYCWGNNAFGQLGDGTKESRTTATQVSGVDGVTGISTGTGH-TTCAIAGAAG-YCWGANA 678

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G+   G    R +  P +L    D   V+ ++ GE  T  +++S  ++ +G    G LG
Sbjct: 679 WGSVGYGTLTDRPN--PTRLNGLSD---VTAISAGERTTCALASS-YVYCWGFNATGQLG 732

Query: 403 HGNLQNVSQPKEV 415
            GN  +   P +V
Sbjct: 733 VGNTDDRLTPTQV 745


>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 383

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 171/361 (47%), Gaps = 39/361 (10%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
            IS G  H+ L T +G+++ WG+G  GRLG      V  P L       +++ ++ G   
Sbjct: 36  GISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLH 94

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           + ALT  G+++TWG+   GA  +G +      +PR++ D+ D  ++S +A    HTA ++
Sbjct: 95  SVALTHQGDVFTWGYGGFGA--LGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAIT 151

Query: 386 TSGQLFTYG--DGTFGVLGHGNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            SG+L+ +G  +G   +             +S P +V++L  + V SV+CG + T A+  
Sbjct: 152 ESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK 210

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                       G+L+ WG      LG  D      P  V  L      Q +CG   ++ 
Sbjct: 211 E-----------GQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAV------L 551
           LT  GKV + G   HGQLG+   +++ + T +E    ++ V   S GS   A+      L
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFL 319

Query: 552 TSGGSVYTWGKNANGQLGL-GDSQERETPTFVEALRD------RQVESVVCGSSITAAIC 604
           T GG ++ WG   + QLG+ G  + + TP  V  L +       +V S+  G+S   A+C
Sbjct: 320 TDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGAS--HALC 377

Query: 605 L 605
           L
Sbjct: 378 L 378



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 161/365 (44%), Gaps = 60/365 (16%)

Query: 217 ILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAAL 276
           I  D+ IWG+G  GG +G        +N   V  L P   E ++    + I+LG  H+  
Sbjct: 48  IDGDLWIWGKGD-GGRLGFG-----QENSVFVPNLNPLFEEHSI----RCIALGGLHSVA 97

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIY 336
           +T +G+VF WG G  G LGHKV      P+ V+      + +++     T A+T+SGE+Y
Sbjct: 98  LTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELY 157

Query: 337 TWGHN--------------NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            WG                N G  L    + ++  +P           V+ V+CG + T 
Sbjct: 158 MWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-----------VASVSCGGFFTM 206

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
            ++  GQL+ +G  +   LG G+     +P  V SL G+++  +ACG +H+ A+ +    
Sbjct: 207 ALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEE--- 263

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   GK+ +WG    G+LG      + +PT +  L D   V  + G   +  +TG 
Sbjct: 264 --------GKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGW 315

Query: 503 -------GKVYTMGSAVHGQLGNPKAKDRSITVVE-GKLKEEF------VKGISSGSYHV 548
                  G+++  G+A   QLG P   +   T VE   L EE       V  IS G+ H 
Sbjct: 316 DWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHA 375

Query: 549 AVLTS 553
             L S
Sbjct: 376 LCLVS 380


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 142/280 (50%), Gaps = 26/280 (9%)

Query: 267 ISLGAKH-AALVTKEGEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           IS GA H  AL+T  G V C WG G+DG+LGH    D   P  +    G ++ SV+CG  
Sbjct: 17  ISAGASHTVALLT--GNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGAD 74

Query: 325 QTCALTKSG-EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
            T A +KSG ++Y+WG  + G   +G       ++P  +   L G+R+ +++CG+ H   
Sbjct: 75  YTVARSKSGKDVYSWGWGDFGR--LGHGDPSDLFIPHPI-RALQGLRIKQISCGDCHCLA 131

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           V+   ++ ++G    G LG G  ++   P+++ +  G+++K VA G  H+ AI +     
Sbjct: 132 VTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE----- 186

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGL 502
                  G L+ WG    G LG  D   +L+P  V   +D D  V  SCG   T+ ++  
Sbjct: 187 ------DGDLYGWGWGRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSS 238

Query: 503 GKVYTMGSAVHGQLGNPKAKD----RSITVVEGKLKEEFV 538
           G +YT G + +GQLG+   +D    R +  +  KL  + +
Sbjct: 239 GGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 278



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 129/247 (52%), Gaps = 17/247 (6%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-EVFCWGEGKDGRLGH 296
           DG +    T  D LLP  L +    D+ +++ GA +    +K G +V+ WG G  GRLGH
Sbjct: 41  DGQLGHGDTD-DRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH 99

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               D+  P  +  L G+ ++ +SCG+    A+T   ++ +WG N +G   +G  +  SH
Sbjct: 100 GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD-SH 158

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+    +G+R+  VA G  H+  ++  G L+ +G G +G LG G+  +   P++V 
Sbjct: 159 -VPQKIL-AFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV- 215

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++ G K+  V+CG  HT +I           +  G L+T G +  G+LGH D E  L+P 
Sbjct: 216 NIDGDKIVMVSCGWRHTISI-----------SSSGGLYTHGWSKYGQLGHGDFEDCLVPR 264

Query: 477 CVTRLVD 483
            V  L D
Sbjct: 265 KVQALSD 271



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 15/228 (6%)

Query: 192 TRCPKNESHRLVTPTYGSPL-IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    +   +V+ T G+   + R    KDV  WG G    D G    G  S      D 
Sbjct: 56  TKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG----DFGRLGHGDPS------DL 105

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            +P  + +   L ++ IS G  H   VT E +V  WG  ++G LG     D   P+ +  
Sbjct: 106 FIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILA 165

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   + A+T+ G++Y WG   +G   +G+   R   +P K+   +DG +
Sbjct: 166 FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRL--IPEKV--NIDGDK 221

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           +  V+CG  HT  +S+SG L+T+G   +G LGHG+ ++   P++V++L
Sbjct: 222 IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 269



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 16/281 (5%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           +V  +S G   T AL     + +WG    G   +G   +    LP KL    DG  +  V
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQ--LGHGDTDDRLLPTKL-SAFDGQDIVSV 69

Query: 375 ACGEWHTAIVSTSGQ-LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
            CG  +T   S SG+ ++++G G FG LGHG+  ++  P  + +L+GL++K ++CG  H 
Sbjct: 70  TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCH- 128

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
                     C +  +  K+ +WG    G LG    +   +P  +           + G 
Sbjct: 129 ----------CLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGA 178

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             +V +T  G +Y  G   +G LG     DR I        ++ V  +S G  H   ++S
Sbjct: 179 EHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISISS 237

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV 594
            G +YT G +  GQLG GD ++   P  V+AL D+ +  V+
Sbjct: 238 SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 278



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 11/234 (4%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V  ++ G  HT  + T   + ++G G  G LGHG+  +   P ++ +  G  + SV CG
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG 72

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
                   D  V R KS   G  +++WG  D GRLGH D     +P  +  L      Q 
Sbjct: 73  -------ADYTVARSKS---GKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQI 122

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           SCG    + +T   KV + G   +G+LG    KD  +       +   +K +++G+ H  
Sbjct: 123 SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSV 182

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +T  G +Y WG    G LGLGD+ +R  P  V    D+ V  V CG   T +I
Sbjct: 183 AITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIV-MVSCGWRHTISI 235



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 1/121 (0%)

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS-YHV 548
           S G   TV L     V + G    GQLG+    DR +         + +  ++ G+ Y V
Sbjct: 18  SAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV 77

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
           A   SG  VY+WG    G+LG GD  +   P  + AL+  +++ + CG     A+ +   
Sbjct: 78  ARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENK 137

Query: 609 I 609
           +
Sbjct: 138 V 138


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 176/420 (41%), Gaps = 49/420 (11%)

Query: 208 GSPLIERKD-----ILKD-VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVM 261
           GSP   R       ++ D ++ WG G  GG +G   DG+ + +   +   LP        
Sbjct: 37  GSPASARHQPASAAVMSDAILAWG-GNDGGQLG---DGTTTDSSEPIAVRLPT------G 86

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
             V  ++ G +H+  +T  G V  WG   +G+LG+        P  V   SGI + +V+ 
Sbjct: 87  TTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAV 146

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   + ALT +G +  WG N+ G    G   S S  +  +L        V+ +A G  H 
Sbjct: 147 GADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPN---TTVAAIAAGRDHN 203

Query: 382 AIVSTSG--QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            +++ +G   L  +G    G LG G + + S+P  V    GL V ++A G  H+ A+   
Sbjct: 204 LVLTATGPAALLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTS- 262

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
             D          +  WG    G+LG       LLP  V   V  +    + GR+ ++ L
Sbjct: 263 --DD--------TVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLAL 312

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           T  G     G    GQLGN    D S  V V        +   S  S H   +T+ G+  
Sbjct: 313 TSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISIASRDSDHNVAITTEGAAL 372

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
            WG N+ G LG G + +  TP  V         S+  G+++T       SI+VGD  S +
Sbjct: 373 AWGLNSQGHLGDGTTTDSATPVAV---------SLPAGAALT-------SIAVGDDHSLA 416



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 85/220 (38%), Gaps = 20/220 (9%)

Query: 221 VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           ++ WG   EG LG       DG+V      V   LP        L V  I+ G  H+  +
Sbjct: 214 LLAWGANREGQLG-------DGTVVDRSRPVPVNLPT------GLTVTAIAGGRDHSLAL 260

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYT 337
           T +  V  WG    G+LG         P  V    G    +++ G   + ALT  G    
Sbjct: 261 TSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALA 320

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSGQLFTYGDG 396
           WG N+ G    G     S  +   L     G R+  +A  +  H   ++T G    +G  
Sbjct: 321 WGGNHWGQLGNGSTSDSSEPVAVSLPG---GTRLISIASRDSDHNVAITTEGAALAWGLN 377

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           + G LG G   + + P  V    G  + S+A G  H+ A+
Sbjct: 378 SQGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417


>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 145/316 (45%), Gaps = 27/316 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-VNMDVSCPKLVECLSGINVQSVSCG 322
           V  +S    HAA + + GEVF  G+      GH+  +  +  P+ VE L G+  + V+ G
Sbjct: 165 VVQVSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAG 224

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGEWHT 381
              T  LT++G +Y+ G N HG    G+   R      K+ ++ +G+  V+++A G  + 
Sbjct: 225 LNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRP---TPKIIESFEGIGSVAQIAAGPSYV 281

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDI 439
             V+ SG ++++G G+   LGHG   N   P+ +++ R   L V  V+ G  H  A+   
Sbjct: 282 LAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDS- 340

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                      G ++TWG    G LGH D   K LP  +  L     VQ    +  T  L
Sbjct: 341 ----------SGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVL 390

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSIT------VVEGKLKEEFVKGISSGSYHVAVLTS 553
              G V+  G    G LG P   DR ++       +   L+   V  IS+G YH   +TS
Sbjct: 391 VDGGCVFGFGWMGFGSLGFP---DRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTS 447

Query: 554 GGSVYTWGKNANGQLG 569
            G V+ +G N   QLG
Sbjct: 448 QGQVFGFGDNERAQLG 463



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 159/379 (41%), Gaps = 41/379 (10%)

Query: 244 NKTQVDALLPKLLESAVMLDV----QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           N  +V   L  + ES+ M++       I+ G  H  L++    V+  G    G LGH   
Sbjct: 89  NWKRVLRFLLAVEESSGMVETSAGNMQITTGRYHTLLISNS-SVYSCGSSLCGVLGHG-- 145

Query: 300 MDVSCPKLVECLSG--------INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
                P+  +C+S           V  VS        + +SGE++T G N+  +   G +
Sbjct: 146 -----PETTQCVSFSRITFPSLARVVQVSASHNHAAYILESGEVFTCGDNS--SFCCGHQ 198

Query: 352 -RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
             SR  + PR   + L GV   +VA G   T  ++ +G +++ G  T G LGHG+  +  
Sbjct: 199 DTSRPIFRPR-FVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRP 257

Query: 411 QPKEVESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
            PK +ES  G+  V  +A GP +  A+ D            G ++++G      LGH + 
Sbjct: 258 TPKIIESFEGIGSVAQIAAGPSYVLAVTD-----------SGVVYSFGSGSNFCLGHGEQ 306

Query: 470 ERKLLPTCVT--RLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
             +  P  +   R  +   V+ S G    V L   G VYT G    G LG+    D+++ 
Sbjct: 307 HNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLP 366

Query: 528 VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD---SQERETPTFVEA 584
                LK      + +      VL  GG V+ +G    G LG  D   S +   P  +++
Sbjct: 367 EPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDS 426

Query: 585 LRDRQVESVVCGSSITAAI 603
           LR  +V  +  G   T A+
Sbjct: 427 LRAHRVSQISTGLYHTVAV 445



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 20/272 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+ +E+   +  + ++ G      +T+ G V+  G    G+LGH   +D   PK++E   
Sbjct: 207 PRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFE 266

Query: 313 GI-NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL--DGV 369
           GI +V  ++ G     A+T SG +Y++G  ++     GE+ +  H  PR +  T     +
Sbjct: 267 GIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFH--PRAI-QTFRRKNL 323

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V +V+ G+ H   + +SG ++T+G G  G LGHG+  + + P+ + SL+      V   
Sbjct: 324 HVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCAR 383

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
              T  +VD           GG +F +G    G LG  D    ++ + P  +  L     
Sbjct: 384 KRKTFVLVD-----------GGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRV 432

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            Q S G   TV +T  G+V+  G     QLG+
Sbjct: 433 SQISTGLYHTVAVTSQGQVFGFGDNERAQLGH 464



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 75/154 (48%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           L V  +S G +H   +   G V+ WG+G  G LGH   +D + P+ +  L       V  
Sbjct: 323 LHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCA 382

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
            + +T  L   G ++ +G    G+    +R      +  ++ D+L   RVS+++ G +HT
Sbjct: 383 RKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHT 442

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
             V++ GQ+F +GD     LGH  L+   +P E+
Sbjct: 443 VAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEI 476


>gi|412992371|emb|CCO20084.1| predicted protein [Bathycoccus prasinos]
          Length = 851

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 160/360 (44%), Gaps = 82/360 (22%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGV-RVSKVAC 376
           VS G      LTK+G +YTWG  + G    G   +     +PRK+F   + + RV+KVAC
Sbjct: 388 VSAGGSHCAGLTKNGTLYTWGLASSGE--TGHHHTPIEVAIPRKVFSMAENLHRVTKVAC 445

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G  HT  V+  GQLF+ G G  G LG G   +       ++LRG+ V  VA G  H+  I
Sbjct: 446 GSNHTLAVTVDGQLFSCGRGRHGQLGLGYFHDGGPLTRCDALRGMHVTKVAAGGQHSVCI 505

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD-------GERKLLP-------TCVTRLV 482
            D            G++++WGD  KG+LG  D       G    +P        C   L 
Sbjct: 506 TD-----------DGRVWSWGDCTKGQLGLGDLRFATSAGWHTGVPWPCLVESLCEENLS 554

Query: 483 DFDF-------VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-----PKAKDRSITV-- 528
            FD        VQ SCG+M T+ +T  GK++  G+  +GQ+        + K R+ TV  
Sbjct: 555 SFDLLDGKDSVVQVSCGKMHTMFVTQSGKLFACGNGSYGQIAGLAPTLKEQKSRNGTVGG 614

Query: 529 ----------VEGKLKEE---------------------------FVKGISSGSYHVAVL 551
                     ++  ++++                            V  ++ G  H  VL
Sbjct: 615 YNQYTPKQIQIKHHVRKQDGTTLMHRVRACPCVNANQPSNGNVICRVAQVTCGGNHSLVL 674

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ--VESVVCGSSITAAICLHKSI 609
           T  G+V+  G N+ GQLGLGD + R+  + V    D++  V S+  G+  +AAI  ++++
Sbjct: 675 TGCGAVFATGTNSYGQLGLGDVESRDVFSRVWRFHDKKLNVVSITTGAHHSAAIVSNQTV 734



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 165/415 (39%), Gaps = 83/415 (20%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAV--MLDVQNISLGAKHAALVTKEGEVFCWGEGKD 291
           G A  G    + T ++  +P+ + S    +  V  ++ G+ H   VT +G++F  G G+ 
Sbjct: 408 GLASSGETGHHHTPIEVAIPRKVFSMAENLHRVTKVACGSNHTLAVTVDGQLFSCGRGRH 467

Query: 292 GRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           G+LG     D       + L G++V  V+ G   +  +T  G +++WG    G   +G+ 
Sbjct: 468 GQLGLGYFHDGGPLTRCDALRGMHVTKVAAGGQHSVCITDDGRVWSWGDCTKGQLGLGDL 527

Query: 352 R--SRSHW--------LPRKL-------FDTLDGV-RVSKVACGEWHTAIVSTSGQLFTY 393
           R  + + W        L   L       FD LDG   V +V+CG+ HT  V+ SG+LF  
Sbjct: 528 RFATSAGWHTGVPWPCLVESLCEENLSSFDLLDGKDSVVQVSCGKMHTMFVTQSGKLFAC 587

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G+G++G +               +L+  K ++   G ++      I +        G  L
Sbjct: 588 GNGSYGQIA----------GLAPTLKEQKSRNGTVGGYNQYTPKQIQIKHHVRKQDGTTL 637

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
                A       V+  +      + R+      Q +CG   ++ LTG G V+  G+  +
Sbjct: 638 MHRVRA----CPCVNANQPSNGNVICRV-----AQVTCGGNHSLVLTGCGAVFATGTNSY 688

Query: 514 GQLGNPKAKDRSI--TVVEGKLKEEFVKGISSGSYHVAVLTS------------------ 553
           GQLG    + R +   V     K+  V  I++G++H A + S                  
Sbjct: 689 GQLGLGDVESRDVFSRVWRFHDKKLNVVSITTGAHHSAAIVSNQTVLKETDCEERISNDE 748

Query: 554 ------------------------GGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
                                   G  +Y WG+   GQLG G+++ +  PT  ++
Sbjct: 749 WLEAKACSYAAGGKGEYDKLHTKYGYKLYQWGRGDWGQLGNGENRGKWLPTLTKS 803



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 16/227 (7%)

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-----AKDRSITVVEGKLKEEFVKG 540
           FVQ S G     GLT  G +YT G A  G+ G+       A  R +  +   L    V  
Sbjct: 385 FVQVSAGGSHCAGLTKNGTLYTWGLASSGETGHHHTPIEVAIPRKVFSMAENLHR--VTK 442

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           ++ GS H   +T  G +++ G+  +GQLGLG   +    T  +ALR   V  V  G    
Sbjct: 443 VACGSNHTLAVTVDGQLFSCGRGRHGQLGLGYFHDGGPLTRCDALRGMHVTKVAAGGQ-- 500

Query: 601 AAICLHKSISVGDQSSCSQCRMPFG-FRRKKHNCYNCGLHFCSACSTKKIINASLTPN-- 657
            ++C+     V     C++ ++  G  R      ++ G+ +   C  + +   +L+    
Sbjct: 501 HSVCITDDGRVWSWGDCTKGQLGLGDLRFATSAGWHTGVPW--PCLVESLCEENLSSFDL 558

Query: 658 -KGKPSRVCDTCYN-HLQKITHSGRLLKQENQSPRNLLNLQGSLSEE 702
             GK S V  +C   H   +T SG+L    N S   +  L  +L E+
Sbjct: 559 LDGKDSVVQVSCGKMHTMFVTQSGKLFACGNGSYGQIAGLAPTLKEQ 605


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 147/314 (46%), Gaps = 23/314 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           V NIS    HAA VT+ GEVF  G+      GH +V   +  P  VE L GI  + V+ G
Sbjct: 156 VINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATG 215

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHT 381
              T  LT+ G++YT G N HG    G+   R+     KL +  +G  +V ++A G  +T
Sbjct: 216 LSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRA---TPKLIELFEGPTQVVQIAAGASYT 272

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDI 439
             V+  G + ++G  T   LGHG+  +   P+ ++S   R + V  V+ G  H  A+  +
Sbjct: 273 FAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 332

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                      G ++TWG    G LGH D   K  P  +  L     VQ    +  T  L
Sbjct: 333 -----------GHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVL 381

Query: 500 TGLGKVYTMGSAVHGQLG--NPKAKDRSIT--VVEGKLKEEFVKGISSGSYHVAVLTSGG 555
           T  G V   G    G LG  +    D+ +   V+E  L++ +V  IS+G YH   +T+ G
Sbjct: 382 TDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLE-SLQDHYVSQISTGLYHTVAVTNKG 440

Query: 556 SVYTWGKNANGQLG 569
            V+ +G N   QLG
Sbjct: 441 IVFGFGDNERAQLG 454



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 153/350 (43%), Gaps = 33/350 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-------VSCPKLVECLSGINVQSV 319
           ++ G  H  LV  +  V+  G    G LGH  +         VS P L        V ++
Sbjct: 107 VATGRYHTLLV-HDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSR------VINI 159

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
           S        +T+SGE++T G N+      GE   R+ + P ++ + L G+   +VA G  
Sbjct: 160 SASHNHAAFVTESGEVFTCGDNSSLCCGHGEV-GRTIFRPMQV-EALKGIPCKQVATGLS 217

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIVD 438
            T I++  GQ++T G  T G LGHG+  + + PK +E   G  +V  +A G  +T A+ D
Sbjct: 218 FTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTD 277

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGRMLT 496
                       G + ++G      LGH D   +LLP  +      +   V+ S G    
Sbjct: 278 -----------DGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHA 326

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           V L  LG VYT G    G LG+    D++   + G LK +    + +      VLT  GS
Sbjct: 327 VALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGS 386

Query: 557 VYTWGKNANGQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           V  +G    G LG    G S +   P  +E+L+D  V  +  G   T A+
Sbjct: 387 VVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAV 436



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 20/271 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +E+   +  + ++ G     ++T++G+V+  G    G+LGH   +D + PKL+E   
Sbjct: 198 PMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFE 257

Query: 313 G-INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
           G   V  ++ G   T A+T  G ++++G   +    +G        LPR +  F   + +
Sbjct: 258 GPTQVVQIAAGASYTFAVTDDGTVHSFGSCTN--FCLGHGDQHDELLPRAIQSFKRRN-I 314

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V +V+ G+ H   +   G ++T+G G  G LGHG+  + + P+ + SL+G     V   
Sbjct: 315 HVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCAR 374

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDF 486
              T  + D            G +  +G    G LG +D    ++ + P  +  L D   
Sbjct: 375 KRKTFVLTD-----------EGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYV 423

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            Q S G   TV +T  G V+  G     QLG
Sbjct: 424 SQISTGLYHTVAVTNKGIVFGFGDNERAQLG 454



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 21/227 (9%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPW 431
           +VA G +HT +V  S  +++ G    GVLGHG            S   L +V +++    
Sbjct: 106 QVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHN 164

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
           H A + +            G++FT GD      GH +  R +  P  V  L      Q +
Sbjct: 165 HAAFVTE-----------SGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVA 213

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGISSGSY 546
            G   TV LT  G+VYT GS  HGQLG+    DR+    I + EG  +   V  I++G+ 
Sbjct: 214 TGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQ---VVQIAAGAS 270

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           +   +T  G+V+++G   N  LG GD  +   P  +++ + R +  V
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVV 317



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D LLP+ ++S     + V  +S G +HA  +   G V+ WG G  G LGH    D + 
Sbjct: 297 QHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTS 356

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L G     V   + +T  LT  G +  +G    G+    +R +    +  ++ +
Sbjct: 357 PELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLE 416

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L    VS+++ G +HT  V+  G +F +GD     LG   ++   +P E+
Sbjct: 417 SLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEI 467


>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
          Length = 410

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 50/351 (14%)

Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           + + Q+   +P+ +E+   L+V+ +++G +H+A++T++G+++ +G G  G LGH    DV
Sbjct: 33  KQQIQIPKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDV 92

Query: 303 SC--PKLVECLSGIN--VQSVSCGEFQTCALTKSGEIYTWGHNNHGADL----------V 348
               P+LVE     N  +  V  GE+ T ALT  GE+YTWG+                 +
Sbjct: 93  KFDNPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGL 152

Query: 349 GERRSRSHWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ 407
           G    + H+ P+K+ F   + ++VS++  G +HT  +S +G L+T+G G FGVLG+ +  
Sbjct: 153 GHGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNS 212

Query: 408 NVSQP---KEVESLR----GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
               P    E   ++     LK++ +     +T A+++            G L+ WG  D
Sbjct: 213 YSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMN-----------DGTLYVWGKND 261

Query: 461 KGRLGHVDG------ERKLLPTCVTRLVDFD----FVQASCGRMLTVGLTGLGKVYTMGS 510
           +G+LG   G      E + +P  +T L   D          G+   +       +Y +G 
Sbjct: 262 RGQLGTGSGIGIDMIESENVPIAITVLDKNDQPHLVKDFHPGQNTMIIRDDEDNIYKVGL 321

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            +           + + +   + K+E V  +S G  H  VL +   +  WG
Sbjct: 322 KL-------DYSPKQVNIFNEEFKKEDVTQLSCGRKHYCVLNNQNKLMVWG 365



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 57/249 (22%)

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV--SQPKEV 415
           +P+K+ +  D + V K+  G  H+A+++  G+L+T+G G +G LGHG+ ++V    P+ V
Sbjct: 42  IPQKM-EAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLV 100

Query: 416 ESL--RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK------------ 461
           E    R  K+  V  G +HTAA+              G+++TWG   K            
Sbjct: 101 EFFEKRNKKIVEVGLGEYHTAALTS-----------DGEVYTWGYGGKQTLFNWMITQEV 149

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFVQAS--------CGRMLTVGLTGLGKVYTMGSAVH 513
           G LGH D +    P  V      DF + +         G   T+ ++  G +YT G  + 
Sbjct: 150 GGLGHGDKKHHFFPKKV------DFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLF 203

Query: 514 GQLGNPKAKDRSITVVEGKLKEEF-----------VKGISSGSYHVAVLTSGGSVYTWGK 562
           G LGN  +   S+T +   L +EF           ++ I     +   L + G++Y WGK
Sbjct: 204 GVLGNA-SNSYSLTPM---LNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVWGK 259

Query: 563 NANGQLGLG 571
           N  GQLG G
Sbjct: 260 NDRGQLGTG 268



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 50/332 (15%)

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
           ++ +    P+ +E    +NV+ ++ G   +  +T+ G++YT+G  N G    G  +    
Sbjct: 35  QIQIPKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKF 94

Query: 357 WLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG------------TFGVLGH 403
             P+ + F      ++ +V  GE+HTA +++ G+++T+G G              G LGH
Sbjct: 95  DNPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGH 154

Query: 404 GNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           G+ ++   PK+V+      +KV  +  G +HT AI D            G L+TWG    
Sbjct: 155 GDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDT-----------GDLYTWGRGLF 203

Query: 462 GRLGHVDGERKLLPTCVTRL-------VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
           G LG+      L P              D    +       T  L   G +Y  G    G
Sbjct: 204 GVLGNASNSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVWGKNDRG 263

Query: 515 QLGN----------PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           QLG            +    +ITV++   +   VK    G   + +     ++Y  G   
Sbjct: 264 QLGTGSGIGIDMIESENVPIAITVLDKNDQPHLVKDFHPGQNTMIIRDDEDNIYKVGLKL 323

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
                  D   ++   F E  +   V  + CG
Sbjct: 324 -------DYSPKQVNIFNEEFKKEDVTQLSCG 348


>gi|157129109|ref|XP_001661612.1| hypothetical protein AaeL_AAEL011344 [Aedes aegypti]
 gi|108872360|gb|EAT36585.1| AAEL011344-PA [Aedes aegypti]
          Length = 803

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 132/292 (45%), Gaps = 19/292 (6%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ ++       A+   G ++TWG  N G        +  H+ P K+ D +    V  VA
Sbjct: 420 IRQIATNGAHFVAVMYDGSVFTWGEGNKGQLGHNALETWRHY-PTKV-DAIQRYNVVGVA 477

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            G   T   +  G + + GD + G LGHGN  ++  PK V+ L  ++++ VACG  H  A
Sbjct: 478 TGNGFTLFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNIRIRQVACGSQHVVA 537

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ----ASC 491
           + D           GG L+TWG ++ G LG   G++ L+ T   RL+    +Q      C
Sbjct: 538 LSD-----------GGHLYTWGSSNDGALGL--GKQMLVSTEPRRLIISQMIQNIREIYC 584

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
           G   TV LT  G  Y  GS  H +LG      +   + +     E +  +S      A L
Sbjct: 585 GPDCTVILTEGGSCYCCGSNRHNRLGFGMKITQLTALQKVTFVAEKILSVSVAETSGAFL 644

Query: 552 TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G  V T G+N NGQ GLG   E   PT V++L  R +  + C S+   AI
Sbjct: 645 IEGNYVITTGENNNGQRGLGHPDENGEPTMVKSLMSRFITKIKCHSTYMVAI 696



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 28/215 (13%)

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTR 480
           K++ +A    H  A+   M D        G +FTWG+ +KG+LGH   E  +  PT V  
Sbjct: 419 KIRQIATNGAHFVAV---MYD--------GSVFTWGEGNKGQLGHNALETWRHYPTKVDA 467

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           +  ++ V  + G   T+  T LG V + G    G LG+       +  +  KL    ++ 
Sbjct: 468 IQRYNVVGVATGNGFTLFWTNLGVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNIRIRQ 527

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSS 598
           ++ GS HV  L+ GG +YTWG + +G LGLG       E    + +   + +  + CG  
Sbjct: 528 VACGSQHVVALSDGGHLYTWGSSNDGALGLGKQMLVSTEPRRLIISQMIQNIREIYCGPD 587

Query: 599 ITAAICLHKSISVGDQSSCSQC------RMPFGFR 627
            T  +         +  SC  C      R+ FG +
Sbjct: 588 CTVILT--------EGGSCYCCGSNRHNRLGFGMK 614



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 29/268 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WGEG           G +  N  +     P  +++    +V  ++ G       T  
Sbjct: 439 VFTWGEGN---------KGQLGHNALETWRHYPTKVDAIQRYNVVGVATGNGFTLFWTNL 489

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G V   G+   G LGH   + +  PK+V+ L+ I ++ V+CG     AL+  G +YTWG 
Sbjct: 490 GVVLSCGDNSSGCLGHGNQISLLVPKIVQKLNNIRIRQVACGSQHVVALSDGGHLYTWGS 549

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           +N GA  +G++   S   PR+L  +     + ++ CG   T I++  G  +  G      
Sbjct: 550 SNDGALGLGKQMLVSTE-PRRLIISQMIQNIREIYCGPDCTVILTEGGSCYCCGSNRHNR 608

Query: 401 LGHGNLQNVSQPKEVESLRGL--KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           LG G    ++Q   ++ +  +  K+ SV+      A +++           G  + T G+
Sbjct: 609 LGFG--MKITQLTALQKVTFVAEKILSVSVAETSGAFLIE-----------GNYVITTGE 655

Query: 459 ADKGR--LGHVD--GERKLLPTCVTRLV 482
            + G+  LGH D  GE  ++ + ++R +
Sbjct: 656 NNNGQRGLGHPDENGEPTMVKSLMSRFI 683


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 33/277 (11%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR---------LGHKVNMDV 302
           +P  +++   + +   ++G  H   V  +G  + WG  + G+         +G  V  D+
Sbjct: 81  IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
             PK   C   + V+ V+ G   +  LT+ G ++TWG      D+      +   +P ++
Sbjct: 141 VIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDI------KQISVPVRV 192

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
              L+ VR+  +A G +H   +   G+L  +G+  +G LG G+ Q  S P  V+ L  L 
Sbjct: 193 -QGLENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTR 480
           +  +A G WH+ A+ D            G+++ WG  + GRLG  D ++  K++P  V  
Sbjct: 250 LVDIAAGGWHSTALTDK-----------GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNL 298

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           L + D +Q SCG   +V LT  G++++ G   HG+LG
Sbjct: 299 LAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 48/384 (12%)

Query: 255 LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSG 313
           ++E+     V+++  G++++  +  +G +F WG  + G LGH+      + P  V+ L+ 
Sbjct: 31  VVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALAN 90

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHG-------ADLVGERRSRSHWLPRKLFDTL 366
           + +   + G +   A+   G  Y WG N +G        D +G    R   +P++    L
Sbjct: 91  VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL 150

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
               V +VA G  H+ +++  G ++T+G         G+++ +S P  V+ L    V+ +
Sbjct: 151 ---TVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE--NVRLI 201

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           A G +H  A+ +            G+L  WG+ + G+LG  D +    P  V  L D   
Sbjct: 202 AVGAFHNLALEE-----------DGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTL 250

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK---LKEEFVKGISS 543
           V  + G   +  LT  G+VY  G   HG+LG     D+S  +V  K   L EE +  +S 
Sbjct: 251 VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGD-NDKSSKMVPQKVNLLAEEDIIQVSC 309

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLG----DSQERETPTFV------------EALRD 587
           G  H   LT  G ++++G+  +G+LG G      Q  E P  +            E    
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGK 369

Query: 588 RQVESVVCGSSITAAICLHKSISV 611
              +S+ CG   T AI   KS  +
Sbjct: 370 WSAKSIACGGRHTLAIVEWKSDDI 393



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 34/333 (10%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           +  WG G+DG+LG   N +     +VE L   +V+SV  G   + A+   G ++TWG N 
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G  L  +  +++  +P ++   L  V++++ A G WH   V   G+ + +G   +G  G
Sbjct: 67  RGT-LGHQPETKTENIPSRV-KALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 403 HGNLQN---------VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
              L++         +  PK       L V+ VA G  H+  +              G +
Sbjct: 125 EEPLKDEMGRPVRRDIVIPKRCAPK--LTVRQVAAGGTHSVVLTRE-----------GHV 171

Query: 454 FTWGDA-DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           +TWG     G +  +      +P  V  L +   +  + G    + L   G++   G+  
Sbjct: 172 WTWGQPWPPGDIKQIS-----VPVRVQGLENVRLI--AVGAFHNLALEEDGRLLAWGNNE 224

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           +GQLG    +  S  V    L +  +  I++G +H   LT  G VY WG+  +G+LGLGD
Sbjct: 225 YGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGD 284

Query: 573 SQE--RETPTFVEALRDRQVESVVCGSSITAAI 603
           + +  +  P  V  L +  +  V CG + + A+
Sbjct: 285 NDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317



 Score = 46.6 bits (109), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%)

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           + +  S+  WG   +GQLG+G ++E+E    VEAL    V SVV GS  + AIC
Sbjct: 1   MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAIC 54


>gi|343928192|ref|ZP_08767647.1| putative serine/threonine protein kinase [Gordonia alkanivorans
           NBRC 16433]
 gi|343761890|dbj|GAA14573.1| putative serine/threonine protein kinase [Gordonia alkanivorans
           NBRC 16433]
          Length = 732

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 151/327 (46%), Gaps = 34/327 (10%)

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
           ++G  +CWG+ + G+LG     +   P  V  L+G  V S++ G   TCA+ +S   Y W
Sbjct: 406 RDGTAWCWGDNQAGQLGDGTTTNRWTPTRVADLTG--VTSITTGGPNTCAIAES-VAYCW 462

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G+N++G   +G+  + S W P ++ D  D   V+ ++   W T  ++ +G  + +G   F
Sbjct: 463 GNNDYGQ--IGDGTTTSRWKPARVADLAD---VTAISTANWATCAIA-AGTAYCWGTNDF 516

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
             LG G+  N  +P  V  L    V S++ G     A+             GG  + WG 
Sbjct: 517 DQLGDGSTANQYRPVRVAGL--ADVTSISVGVNFACAVA------------GGDAYCWGL 562

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            D G++G      +  PT   R+ D D   + S G      + G G  Y  G+   GQLG
Sbjct: 563 NDNGQVGDGTTYNQSKPT---RVADLDAATSVSAGDQAACAVAG-GSAYCWGNNAFGQLG 618

Query: 518 NPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +     R S T+V G    + V  IS+G+ H     +GG  + WG NA G +G G  ++R
Sbjct: 619 DGTKDSRTSATLVSGV---DDVTAISTGTGHTTCAIAGGVGWCWGANAWGSVGDGTLEDR 675

Query: 577 ETPTFVEALRDRQVESVVCGSSITAAI 603
             PT +  L D  V ++  G   T A+
Sbjct: 676 PNPTRLNGLSD--VTAISTGERTTCAL 700



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 27/283 (9%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +S G   +C++ + G  + WG N  G   +G+  + + W P ++ D L GV  + +  G 
Sbjct: 395 LSAGLGASCSI-RDGTAWCWGDNQAGQ--LGDGTTTNRWTPTRVAD-LTGV--TSITTGG 448

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
            +T  ++ S   + +G+  +G +G G   +  +P  V  L    V +++   W T AI  
Sbjct: 449 PNTCAIAES-VAYCWGNNDYGQIGDGTTTSRWKPARVADL--ADVTAISTANWATCAIA- 504

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
                       G  + WG  D  +LG      +  P  V  L D   +  S G      
Sbjct: 505 -----------AGTAYCWGTNDFDQLGDGSTANQYRPVRVAGLADVTSI--SVGVNFACA 551

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           + G G  Y  G   +GQ+G+    ++S       L  +    +S+G    A   +GGS Y
Sbjct: 552 VAG-GDAYCWGLNDNGQVGDGTTYNQSKPTRVADL--DAATSVSAGD-QAACAVAGGSAY 607

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
            WG NA GQLG G    R + T V  + D    S   G +  A
Sbjct: 608 CWGNNAFGQLGDGTKDSRTSATLVSGVDDVTAISTGTGHTTCA 650


>gi|332256130|ref|XP_003277170.1| PREDICTED: serine/threonine-protein kinase Nek8 [Nomascus
           leucogenys]
          Length = 692

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 154/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G    LG  + + +   ++V+         V+ G  
Sbjct: 296 RGIPRGPVRPAIPPPLSSVYAWGGG----LGTPLRLPMLNTEVVQ---------VAAGRT 342

Query: 325 QTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W     GA     L G           +  +   GV +  VACG++ 
Sbjct: 343 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFF 402

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGH +L ++SQP  VE+L G ++  VACG  H  A   + 
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHSSLTDISQPTIVEALLGYEMVQVACGASHVLA---LS 459

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D GRLG    E    P  V      +  +  CG   ++ LT
Sbjct: 460 TER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILT 511

Query: 501 GLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEFVKGISSGSY 546
             G+    GS    +LG         P    +     S T++    L +E +  I  G+ 
Sbjct: 512 VSGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTA 571

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNARRGSRAPCKVQGLEGIKMTMVACGDAFTVAI 628



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 353 LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 409

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 410 GIIMTFGSGSNGCLGHSSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 469

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R   SH  P+++     G    +V CG   + I++ SGQ    G   F  
Sbjct: 470 GDSGRLGLGTR--ESHSCPQQV-PMPPGQEAQRVVCGIDSSMILTVSGQALACGSNRFNK 526

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 527 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 584

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L        +CG   TV +   G+VY+ G    G+
Sbjct: 585 FGSNQHGQLGTNARRGSRAPCKVQGLEGIKMTMVACGDAFTVAIGAEGEVYSWGKGARGR 644

Query: 516 LG 517
           LG
Sbjct: 645 LG 646



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 150/356 (42%), Gaps = 38/356 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G   +G         P  + + L G  + +VA
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGC--LGHSSLTDISQP-TIVEALLGYEMVQVA 449

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 450 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 503

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 504 -----IDSSMILTVSGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 558

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  
Sbjct: 559 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRGSRAPCKVQG-LEGIKMTM 617

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           ++ G      + + G VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 618 VACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 329 MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 387

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG     +   PT VEAL   ++ 
Sbjct: 388 Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHSSLTDISQPTIVEALLGYEMV 446

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 447 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 485


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 149/336 (44%), Gaps = 23/336 (6%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSV 319
           +  V  +S    HAA V + GEVF  G+      GH   +  +  P+LVE L G+  + V
Sbjct: 162 LAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQV 221

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV-RVSKVACGE 378
           + G   T  LT  G +YT G N HG    G+   R      K+ + L+GV  V ++A G 
Sbjct: 222 AAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRR---TPKIVELLEGVGPVVQIAAGP 278

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR--GLKVKSVACGPWHTAAI 436
            +   V+  G + ++G G+   LGHG   N  +P+ ++S R   + V  ++ G  H  A+
Sbjct: 279 SYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
                         G ++TWG    G LGH D   K  P  ++ L     VQ    +  T
Sbjct: 339 DS-----------SGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKT 387

Query: 497 VGLTGLGKVYTMGSAVHGQLGNPK--AKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTS 553
             L   G VY  G    G LG P   A D+ +   +   L+  ++  IS+G YH   + +
Sbjct: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNN 447

Query: 554 GGSVYTWGKNANGQLGLGDSQERETPT--FVEALRD 587
            G ++ +G N   QLG    +    PT  FV+   D
Sbjct: 448 KGQIFGFGDNERAQLGHDTLRGCPVPTEIFVQEATD 483



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 148/356 (41%), Gaps = 45/356 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC--LSGIN------VQS 318
           I+ G  H  L+ K+  V+  G    G LGH        P+  +C   S IN      V  
Sbjct: 116 ITTGRYHTLLI-KDSSVYSCGSSLCGVLGHG-------PETTQCVAFSRINFPPLAHVAQ 167

Query: 319 VSCGEFQTCALTKSGEIYTWGHNN-----HGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
           VS        + +SGE++T G N+     HG D V     R  + PR L + L GV   +
Sbjct: 168 VSASHNHAAFVMQSGEVFTCGDNSSFCCGHG-DTV-----RPIFRPR-LVEALKGVPCKQ 220

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPWH 432
           VA G   T  ++  G ++T G  T G LGHG+  +   PK VE L G+  V  +A GP +
Sbjct: 221 VAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSY 280

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT--RLVDFDFVQAS 490
             A+ D            G + ++G      LGH +   +L P  +   R      V+ S
Sbjct: 281 AMAVTD-----------DGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRIS 329

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            G    V L   G VYT G    G LG+    D++   +   LK      + +      V
Sbjct: 330 AGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFV 389

Query: 551 LTSGGSVYTWGKNANGQLGL---GDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           L   GSVY +G    G LG    G S +   P  +++LR   +  +  G   T A+
Sbjct: 390 LVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 130/276 (47%), Gaps = 19/276 (6%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N+Q ++ G + T  L K   +Y+ G +  G    G   ++     R  F  L    V++V
Sbjct: 113 NMQ-ITTGRYHTL-LIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPL--AHVAQV 168

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHT 433
           +    H A V  SG++FT GD +    GHG+ ++ + +P+ VE+L+G+  K VA G   T
Sbjct: 169 SASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFT 228

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCG 492
             +            + G ++T G    G+LGH D   +  P  V  L      VQ + G
Sbjct: 229 VFL-----------TMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAG 277

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGSYHVAV 550
               + +T  G V++ GS  +  LG+ +  +  R   +   + K   V  IS+G  HV  
Sbjct: 278 PSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVA 337

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALR 586
           L S G VYTWGK   G LG GD  ++ TP  + +L+
Sbjct: 338 LDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLK 373



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 18/271 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+E+   +  + ++ G      +T +G V+  G    G+LGH   +D   PK+VE L 
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT-LDGVR 370
           G+  V  ++ G     A+T  G ++++G  ++    +G     +   PR +       + 
Sbjct: 267 GVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC--LGHGEQHNELRPRAIQSFRRKTIH 324

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V +++ G+ H   + +SG ++T+G G  G LGHG+  + + P+ + SL+      V    
Sbjct: 325 VVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARK 384

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFV 487
             T  +VD            G ++ +G    G LG  D    ++ + P  +  L      
Sbjct: 385 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYIS 433

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
           Q S G   TV +   G+++  G     QLG+
Sbjct: 434 QISTGLYHTVAVNNKGQIFGFGDNERAQLGH 464



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESA--VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q + L P+ ++S     + V  IS G +H   +   G V+ WG+G  G LGH   +D + 
Sbjct: 306 QHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTT 365

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+++  L       V   + +T  L  +G +Y +G    G+    +R +    +   + D
Sbjct: 366 PEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILD 425

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L G  +S+++ G +HT  V+  GQ+F +GD     LGH  L+    P E+
Sbjct: 426 SLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476


>gi|85001023|ref|XP_955230.1| chromosome condensation (RCC1 homologue) protein [Theileria
           annulata strain Ankara]
 gi|65303376|emb|CAI75754.1| chromosome condensation (RCC1 homologue) protein, putative
           [Theileria annulata]
          Length = 759

 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 166/375 (44%), Gaps = 57/375 (15%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVT-------KEGEVFCWGEGKDGRLGHKVNMD--- 301
            P+++       V  +S G  H+A++          G VF +G G  GRLG+ ++ +   
Sbjct: 80  FPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMNAGTVFTFGLGNSGRLGYHIDTNSEI 139

Query: 302 ----------------VSCPKLVECLSGI--NVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
                              P+ V    G+  NV ++SCG   T   T  G +Y+WG   +
Sbjct: 140 LSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGSNHTLVTTVDGCMYSWGVGAY 199

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
           G  ++G     + ++P K+    D + +SK A G  H+  +   G ++++G G  G LG 
Sbjct: 200 G--VLGNGSVANRYIPVKVIFPYDDIFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGL 257

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           GN ++   P  +E     +V  ++CG  H+A +     DR       G ++TWG    G+
Sbjct: 258 GNTRSYFTPNLIEIFDTYEVFQISCGDSHSACL-----DRF------GTVYTWGSCRGGK 306

Query: 464 LGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           LG  +    +L PT V  L     +Q SCG   T+ L+  GK+Y  GS     LG  K  
Sbjct: 307 LGLGNILSDVLEPTVVESLKGIHIIQVSCGTGNTLALSSTGKIYQWGST----LGFNKQT 362

Query: 523 DRSIT--------VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ 574
           D  I+        VVE   K  FV   +SG Y  A +   G + TWG     +LG GDS+
Sbjct: 363 DGLISHTVYLPQPVVETGFKNIFV---TSGPYSFAAINIFGDLLTWGLGTGYRLGHGDSK 419

Query: 575 ERETPTFVEALRDRQ 589
           +   P FV  LR R 
Sbjct: 420 DHVIPKFVSYLRTRM 434



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 170/405 (41%), Gaps = 70/405 (17%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG G   G +G   +GSV+     V  + P        + +   + G++H+  + ++G V
Sbjct: 194 WGVGAY-GVLG---NGSVANRYIPVKVIFPY-----DDIFISKCAAGSRHSMALDRQGNV 244

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
           + WG G +GRLG         P L+E      V  +SCG+  +  L + G +YTWG    
Sbjct: 245 WSWGYGGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRG 304

Query: 344 GADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG------T 397
           G   +G     S  L   + ++L G+ + +V+CG  +T  +S++G+++ +G        T
Sbjct: 305 GK--LGLGNILSDVLEPTVVESLKGIHIIQVSCGTGNTLALSSTGKIYQWGSTLGFNKQT 362

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            G++ H     V  P+ V    G K   V  GP+  AAI            I G L TWG
Sbjct: 363 DGLISH----TVYLPQPVVE-TGFKNIFVTSGPYSFAAI-----------NIFGDLLTWG 406

Query: 458 DADKGRLGHVDGERKLLPTCVTRL-----------------------VDFDFV------- 487
                RLGH D +  ++P  V+ L                       V+ D +       
Sbjct: 407 LGTGYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDEAAFKVEDTVENDSINPYDERR 466

Query: 488 --QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF---VKGIS 542
             Q + G      LT  G VYT G  V+   G   + +      E  L   F   +  I+
Sbjct: 467 IQQIAVGDSHGALLTCNGTVYTWG--VNNGTGYNSSSEALENYCEPILFNHFSSKITKIA 524

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            GS H   +T  G +++WG N NGQLG GD + R  P  V  + +
Sbjct: 525 CGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIEN 569



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 181/460 (39%), Gaps = 123/460 (26%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVE 309
             P L+E     +V  IS G  H+A + + G V+ WG  + G+LG   +  DV  P +VE
Sbjct: 264 FTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTVVE 323

Query: 310 CLSGINVQSVSC------------------------------------------------ 321
            L GI++  VSC                                                
Sbjct: 324 SLKGIHIIQVSCGTGNTLALSSTGKIYQWGSTLGFNKQTDGLISHTVYLPQPVVETGFKN 383

Query: 322 -----GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR---------------- 360
                G +   A+   G++ TWG        +G   S+ H +P+                
Sbjct: 384 IFVTSGPYSFAAINIFGDLLTWGLGT--GYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLK 441

Query: 361 -------KLFDTL--------DGVRVSKVACGEWHTAIVSTSGQLFTYG--DGTFGVLGH 403
                  K+ DT+        D  R+ ++A G+ H A+++ +G ++T+G  +GT      
Sbjct: 442 TYDEAAFKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNNGTGYNSSS 501

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
             L+N  +P         K+  +ACG  HT AI            I G LF+WG  + G+
Sbjct: 502 EALENYCEPILFNHFSS-KITKIACGSSHTLAI-----------TINGLLFSWGSNENGQ 549

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQA---SCGRMLTVGLTGL-----GKVYTMGSAVHGQ 515
           LGH D   +++P  V  + +   V A   + G + +V    +     G ++  GS+  G+
Sbjct: 550 LGHGDLRNRVVPDSVNTIENCINVFAGIDNSGCICSVSHENMMKDEYGTLWVFGSSTCGK 609

Query: 516 LG------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           LG      +     R IT + G      V  ++ G+ H   LT  G++Y  G  + G+LG
Sbjct: 610 LGLGENMTSTVMTPREITTITG------VHSLALGAMHSLALTHDGTLYASGAGSGGRLG 663

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
            GD+       FV+   D +  ++  GSS + AI +   +
Sbjct: 664 TGDTTNAF--VFVQVKTDHKFVAIAAGSSHSLAISMENDL 701



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 153/365 (41%), Gaps = 52/365 (14%)

Query: 239 GSVSQNKTQVDALLPK---LLESAVMLDVQNISL--GAKHAALVTKEGEVFCWGEGKDGR 293
           GS      Q D L+     L +  V    +NI +  G    A +   G++  WG G   R
Sbjct: 353 GSTLGFNKQTDGLISHTVYLPQPVVETGFKNIFVTSGPYSFAAINIFGDLLTWGLGTGYR 412

Query: 294 LGHKVNMDVSCPKLVECL--------------------------SGIN------VQSVSC 321
           LGH  + D   PK V  L                            IN      +Q ++ 
Sbjct: 413 LGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDEAAFKVEDTVENDSINPYDERRIQQIAV 472

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+     LT +G +YTWG NN G        +  ++    LF+     +++K+ACG  HT
Sbjct: 473 GDSHGALLTCNGTVYTWGVNN-GTGYNSSSEALENYCEPILFNHFSS-KITKIACGSSHT 530

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             ++ +G LF++G    G LGHG+L+N   P  V ++      +V  G  ++  I  +  
Sbjct: 531 LAITINGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIE--NCINVFAGIDNSGCICSVSH 588

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERK----LLPTCVTRLVDFDFVQASCGRMLTV 497
           +    +   G L+ +G +  G+LG   GE      + P  +T +        + G M ++
Sbjct: 589 ENMMKDEY-GTLWVFGSSTCGKLGL--GENMTSTVMTPREITTITGVH--SLALGAMHSL 643

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            LT  G +Y  G+   G+LG     + +   V+ K   +FV  I++GS H   ++    +
Sbjct: 644 ALTHDGTLYASGAGSGGRLGTGDTTN-AFVFVQVKTDHKFVA-IAAGSSHSLAISMENDL 701

Query: 558 YTWGK 562
           Y WG+
Sbjct: 702 YGWGE 706



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 29/260 (11%)

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            + ++G   F  LG G   N S+ P+ +    G +V  V+CG +H+A    ++V   + N
Sbjct: 57  NVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSA----VLVCSSREN 112

Query: 448 AIGGKLFTWGDADKGRLG-HVDGERKLL--------------------PTCVTRLVDFDF 486
              G +FT+G  + GRLG H+D   ++L                    P  ++  +  + 
Sbjct: 113 MNAGTVFTFGLGNSGRLGYHIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNV 172

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGS 545
           V  SCG   T+  T  G +Y+ G   +G LGN    +R I V V     + F+   ++GS
Sbjct: 173 VTISCGSNHTLVTTVDGCMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDDIFISKCAAGS 232

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICL 605
            H   L   G+V++WG   NG+LGLG+++   TP  +E     +V  + CG S +A  CL
Sbjct: 233 RHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSHSA--CL 290

Query: 606 HKSISVGDQSSCSQCRMPFG 625
            +  +V    SC   ++  G
Sbjct: 291 DRFGTVYTWGSCRGGKLGLG 310



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 33/229 (14%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH----------KVNMDVSCPKLVECLSG 313
           +  I+ G+ H   +T  G +F WG  ++G+LGH           VN   +C   +   +G
Sbjct: 520 ITKIACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIENC---INVFAG 576

Query: 314 INVQSVSCG-EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
           I+     C    +     + G ++ +G +  G   +GE  + +   PR++  T+ GV   
Sbjct: 577 IDNSGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSTVMTPREI-TTITGVH-- 633

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            +A G  H+  ++  G L+  G G+ G LG G+  N     +V++    K  ++A G  H
Sbjct: 634 SLALGAMHSLALTHDGTLYASGAGSGGRLGTGDTTNAFVFVQVKTDH--KFVAIAAGSSH 691

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
           + AI           ++   L+ WG+   G+   +D +  L PT +  +
Sbjct: 692 SLAI-----------SMENDLYGWGE---GKYLTLDEDFVLEPTIINTI 726


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 165/340 (48%), Gaps = 32/340 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H AL+T   +++ +G    G+LG      V  P  V+ L    V+  +CG   T
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++ 
Sbjct: 96  LVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRH--KIKQLSAGANISAALTE 153

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  ++ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 154 DGELFMWGDNSEGQIGLNSISNVYVPRQVTV--GKPISWISCGYYHSAFVT--------- 202

Query: 447 NAIGGKLFTWGDADKGRLG----HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
             + GKL+T+G+ + G+LG     +   RK  P  V+ + +   +Q +CG   TV LT  
Sbjct: 203 --MEGKLYTFGEPECGKLGLPSEQLINHRK--PQLVSGISE-KVIQVACGGGHTVVLTEK 257

Query: 503 GKVYTMGSAVHGQLGNP----KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
             VYT G    GQLG      +A + +I      +K++ ++ IS G  H A++T  G +Y
Sbjct: 258 A-VYTFGQGRFGQLGLGSFIFQAPEPAILE---HVKDQKIRHISCGENHTALITDVGHMY 313

Query: 559 TWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
           T+G   +G+LGLG  +   +  PT         +  V CG
Sbjct: 314 TFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACG 353



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 121/234 (51%), Gaps = 23/234 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S GA  +A +T++GE+F WG+  +G++G     +V  P+ V    G  +  +SCG 
Sbjct: 138 IKQLSAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTV--GKPISWISCGY 195

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  G++YT+G    G   +   +  +H  P+     + G+  +V +VACG  HT
Sbjct: 196 YHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQ----LVSGISEKVIQVACGGGHT 251

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G+ +    +P  +E ++  K++ ++CG  HTA I D+ 
Sbjct: 252 -VVLTEKAVYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDV- 309

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                     G ++T+GD   G+  LG  +   + +PT  +    F     +CG
Sbjct: 310 ----------GHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACG 353



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 5/121 (4%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQ--LGNPKAKDRSITVVEGKLKEEFVKGISSG 544
           +  SCG   T  +TG  K+Y  GS   GQ  LG+  A  R I V    LK E VK  + G
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVK--ALKSEKVKLAACG 91

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAI 603
             H  V T GG+VY  G N  GQLGLGD++ER +   +     R +++ +  G++I+AA+
Sbjct: 92  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAAL 151

Query: 604 C 604
            
Sbjct: 152 T 152



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN--MDVSCPKLVEC 310
           P +LE      +++IS G  H AL+T  G ++ +G+G+ G+LG  +    +   P L   
Sbjct: 282 PAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSH 341

Query: 311 LSGINVQSVSCG 322
            S   +  V+CG
Sbjct: 342 FSKFIIHLVACG 353


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 14/187 (7%)

Query: 281  GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
            GE+F WG+   G+LG  ++      P++VE L+G+ +  +S GE  + AL+ +G +Y+WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 340  HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             N+ G   +G   S+       L   LD  +V  +ACG  HTA+++  G +FT+G G +G
Sbjct: 973  KNDFGQLGLGHTESKDS---PSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYG 1029

Query: 400  VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
             LGH + ++  +P  V  L G +V  +ACG WHT A V  +          GK+F +G  
Sbjct: 1030 QLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSEL----------GKVFAFGSG 1079

Query: 460  DKGRLGH 466
              G+LG+
Sbjct: 1080 KNGQLGN 1086



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 25/264 (9%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECL 311
           P+ +++   L V  +S G +H+  V  +G VF WG G +G+LG     + S  P+ ++ L
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKAL 147

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +GI +  VSCG + + AL++ G++++WG N+HG   +G +   S   P+++  +L+G+ +
Sbjct: 148 AGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLG-KEVPSQTSPQRV-RSLEGIPL 205

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ---PKEVESLRGLKVKSVAC 428
           ++VA G  H+  +S SG  F +G  + G L     +   Q   P  V +L+ L V  ++C
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISC 265

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
           G  HTA +              G ++T+G    G+LGH   +R   P CV R +D    Q
Sbjct: 266 GSEHTAVLTQ-----------NGAVYTFGANSSGQLGHSAEQRG--PQCVER-IDGLVSQ 311

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAV 512
             CG   T     L  VYT G  V
Sbjct: 312 IDCGSYHT-----LAYVYTTGQVV 330



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 27/306 (8%)

Query: 303 SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL 362
           S P+ ++    + V  VSCG+  + A+   G ++ WG  + G   +GE + RS + P+K+
Sbjct: 86  SKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERS-FTPQKI 144

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGL 421
              L G+++ +V+CG +H+  +S  GQ+F++G  + G LG G  + + + P+ V SL G+
Sbjct: 145 -KALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGI 203

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCV 478
            +  VA G  H+ A+           ++ G  F WG    G+L   G     ++  P  V
Sbjct: 204 PLAQVAAGGAHSFAL-----------SLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSV 252

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
             L     V  SCG   T  LT  G VYT G+   GQLG+  A+ R    VE    +  V
Sbjct: 253 GALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGH-SAEQRGPQCVER--IDGLV 309

Query: 539 KGISSGSYH-VAVLTSGGSVYTWG------KNANGQLGLGDSQERETPTFVEALRDRQVE 591
             I  GSYH +A + + G V ++G       N+     + D+ +       + L D QV+
Sbjct: 310 SQIDCGSYHTLAYVYTTGQVVSFGHGPSCTSNSTHSETVTDNADISCLISADDLVDIQVK 369

Query: 592 SVVCGS 597
            +  G+
Sbjct: 370 HIFAGT 375



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 130/263 (49%), Gaps = 24/263 (9%)

Query: 363 FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGL 421
           F+TL   RV  V+CG+ H+  V   G++F +G G+ G LG G  +  S  P+++++L G+
Sbjct: 94  FETL---RVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGI 150

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLLPTCVTR 480
           K+  V+CG +H+ A+ +            G++F+WG    G+LG   +   +  P  V  
Sbjct: 151 KIIQVSCGYYHSLALSE-----------DGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS 199

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEF 537
           L      Q + G   +  L+  G  +  GS   GQL   G      R   +  G LK   
Sbjct: 200 LEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLG 259

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V  IS GS H AVLT  G+VYT+G N++GQ  LG S E+  P  VE + D  V  + CGS
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQ--LGHSAEQRGPQCVERI-DGLVSQIDCGS 316

Query: 598 SITAAICLH--KSISVGDQSSCS 618
             T A      + +S G   SC+
Sbjct: 317 YHTLAYVYTTGQVVSFGHGPSCT 339



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 14/187 (7%)

Query: 333  GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            GE++ WG N+HG   +G R   S   P ++ + L GV + +++ GE H+  +S +G +++
Sbjct: 913  GELFAWGQNSHGQLGLG-RIFPSSPTP-QIVEHLAGVPLVQISAGEAHSMALSMTGNVYS 970

Query: 393  YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
            +G   FG LG G+ ++   P  + +L   KV  +ACG  HTA +              G 
Sbjct: 971  WGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQ-----------DGL 1019

Query: 453  LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG-LTGLGKVYTMGSA 511
            +FT+G    G+LGH     +L P  VT L+     Q +CGR  T+  ++ LGKV+  GS 
Sbjct: 1020 VFTFGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSG 1079

Query: 512  VHGQLGN 518
             +GQLGN
Sbjct: 1080 KNGQLGN 1086



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 6/206 (2%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +  +  P+ +++   + +  +S G  H+  ++++G+VF WG+   G+
Sbjct: 122 GAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQ 181

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG-ADLVGER 351
           LG  K     + P+ V  L GI +  V+ G   + AL+ SG  + WG N+ G   L G +
Sbjct: 182 LGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTK 241

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ 411
                + P  +   L  + V  ++CG  HTA+++ +G ++T+G  + G LGH   Q    
Sbjct: 242 APVQRYKPLSV-GALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSAEQR--G 298

Query: 412 PKEVESLRGLKVKSVACGPWHTAAIV 437
           P+ VE + GL V  + CG +HT A V
Sbjct: 299 PQCVERIDGL-VSQIDCGSYHTLAYV 323



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 6/168 (3%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
            P+++E    + +  IS G  H+  ++  G V+ WG+   G+LG         P L+  L 
Sbjct: 938  PQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALD 997

Query: 313  GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
               V  ++CG   T  LT+ G ++T+G   +G   +G   +R    P  L   L G RV+
Sbjct: 998  SQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ--LGHSSTRDELRP-CLVTELLGNRVT 1054

Query: 373  KVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR 419
            ++ACG WHT A VS  G++F +G G  G LG+    N  QP    +LR
Sbjct: 1055 QIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHN--QPNSYVNLR 1100



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 30/221 (13%)

Query: 388  GQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +G  + G LG G +   S  P+ VE L G+ +  ++ G  H+ A+          
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMAL---------- 962

Query: 447  NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL----VDFDFVQASCGRMLTVGLTGL 502
             ++ G +++WG  D G+LG    E K  P+ +  L    VDF     +CG   T  LT  
Sbjct: 963  -SMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDF----LACGGSHTALLTQD 1017

Query: 503  GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWG 561
            G V+T G+  +GQLG+   +D     +  +L    V  I+ G +H +A ++  G V+ +G
Sbjct: 1018 GLVFTFGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFG 1077

Query: 562  KNANGQLGLGDSQE---------RETPTFVEALRDRQVESV 593
               NGQLG   +           R  PT  EA   R +  V
Sbjct: 1078 SGKNGQLGNCGTHNQPNSYVNLRRRIPTLNEATVKRWIADV 1118



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 3/103 (2%)

Query: 503  GKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G+++  G   HGQLG  +    S T  +VE       V+ IS+G  H   L+  G+VY+W
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQ-ISAGEAHSMALSMTGNVYSW 971

Query: 561  GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            GKN  GQLGLG ++ +++P+ + AL  ++V+ + CG S TA +
Sbjct: 972  GKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALL 1014



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 9/163 (5%)

Query: 445  KSNAIGGKLFTWGDADKGRLGHVDGERKLLPT-----CVTRLVDFDFVQASCGRMLTVGL 499
            K   + G+LF WG    G+LG      ++ P+      V  L     VQ S G   ++ L
Sbjct: 907  KKKFLCGELFAWGQNSHGQLGL----GRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMAL 962

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
            +  G VY+ G    GQLG    + +    +   L  + V  ++ G  H A+LT  G V+T
Sbjct: 963  SMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFT 1022

Query: 560  WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
            +G    GQLG   +++   P  V  L   +V  + CG   T A
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLA 1065



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S  K  V    P  + +   L V  IS G++H A++T+ G V+ +G    G+LGH   
Sbjct: 236 ALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHSA- 294

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWGH 340
            +   P+ VE + G+ V  + CG + T A +  +G++ ++GH
Sbjct: 295 -EQRGPQCVERIDGL-VSQIDCGSYHTLAYVYTTGQVVSFGH 334


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 116/215 (53%), Gaps = 16/215 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVEC 310
           P+ LE+   + V  ++ G++H  +++K+G+V+ WG+   G+  LG +    +S P+ V  
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRS 172

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           LS + V  VS G   + AL+ SG ++ WG N+ G   +G+   R       L   L+  +
Sbjct: 173 LSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRE---TPTLVHYLNMKK 229

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
               ACG+ HTA+++  G +FT+G G +G LGH + +N   P+ V  L G KV  +ACG 
Sbjct: 230 TVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGR 289

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
           +HT  + D M           K++++G  + G+LG
Sbjct: 290 YHTLVLTDHM-----------KVYSFGCNEHGQLG 313



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 126/249 (50%), Gaps = 15/249 (6%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVE 416
           PR L + L G+ V++VACG  HT ++S  GQ++T+G  + G LG G     ++S P+ V 
Sbjct: 113 PRSL-EALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVR 171

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           SL  + V  V+ G  H+ A+           ++ G +F WG  D G+LG  D   +  PT
Sbjct: 172 SLSSMPVVQVSAGGDHSFAL-----------SVSGSVFGWGRNDCGQLGLGDTTDRETPT 220

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V  L     V A+CG+  T  LT  G V+T GS  +GQLG+   ++     +  +L   
Sbjct: 221 LVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGA 280

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ-VESVVC 595
            V  I+ G YH  VLT    VY++G N +GQLG  +      P  V+  R+   ++++  
Sbjct: 281 KVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPREGPIIQNIFA 340

Query: 596 GSSITAAIC 604
           G   + A C
Sbjct: 341 GGDSSFATC 349



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 12/213 (5%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+ +E LSGI V  V+CG   T  L+K G++YTWG N+ G   +G+    S   P+ +  
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV-R 171

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK 424
           +L  + V +V+ G  H+  +S SG +F +G    G LG G+  +   P  V  L   K  
Sbjct: 172 SLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTV 231

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF 484
             ACG  HTA +            + G +FT+G    G+LGH      L P  V  L   
Sbjct: 232 FAACGKDHTAVL-----------TMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGA 280

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              + +CGR  T+ LT   KVY+ G   HGQLG
Sbjct: 281 KVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 23/242 (9%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           R++ V C +    ++S +G +F           H        P+ +E+L G+ V  VACG
Sbjct: 81  RLAAVGCTDDGVTLLSDTGVVFCVDSP------HPPFT----PRSLEALSGITVTQVACG 130

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-HVDGERKLL-PTCVTRLVDFDFV 487
             HT  +           +  G+++TWG   +G+LG   +G   +  P CV  L     V
Sbjct: 131 SQHTVVL-----------SKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVV 179

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
           Q S G   +  L+  G V+  G    GQLG     DR    +   L  +     + G  H
Sbjct: 180 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDH 239

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
            AVLT  G+V+T+G    GQLG    +    P  V  L   +V  + CG   T  +  H 
Sbjct: 240 TAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHM 299

Query: 608 SI 609
            +
Sbjct: 300 KV 301


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 169/361 (46%), Gaps = 45/361 (12%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           VQ +S G KH   + ++G +   G+   G+LG K N   S  + +  L    +  +SCG 
Sbjct: 36  VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNN--SSIEQISSLEAQTIVDISCGT 93

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK---LFDTLDGVRVSKVACGEWH 380
             + A++  G IY+WG  + G    G   SR ++ P+K   LF+T    ++ +++CG +H
Sbjct: 94  NHSVAVSDEGSIYSWGDGSEGQLGTGNLSSR-NFTPKKITGLFNT----KIIQISCGNFH 148

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           +  +S  G++F++G    G LG G+ + N + P+ V+SL+G+ +  V  G   + A+   
Sbjct: 149 SLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFAL--- 205

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTV 497
                   ++ G +F WG  + G+LG      K    P  V  L +      SCG   T 
Sbjct: 206 --------SMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTA 257

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF--VKGISSGSYHVAV-LTSG 554
            L+  G VYT G   HGQLG       S   V  K+++    V  ++ G YH  + + S 
Sbjct: 258 VLSKDGSVYTFGDDTHGQLGQNSGNQTS---VPQKIEDYAGQVSQVACGRYHTLLYVFSC 314

Query: 555 GSVYTWGKNANGQLGLGD----SQERETPTFVEA--------LRDRQVESVVCGSSITAA 602
             + ++GK   G L   D    S E E P+  +         LRD  V+ +  G+++  A
Sbjct: 315 NRIVSFGK---GSLRPQDNTECSDEAELPSEFDISSLVPTNDLRDVYVKWIFAGNNVGFA 371

Query: 603 I 603
           +
Sbjct: 372 V 372



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 151/330 (45%), Gaps = 43/330 (13%)

Query: 283 VFCWGEGKDGRLG---------HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           ++CWG+   G+L          H    D    +  EC     VQ VSCGE  T  L + G
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQ--EC-----VQKVSCGEKHTLYLLEDG 53

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            + + G N +G   +G + + S     +   +L+   +  ++CG  H+  VS  G ++++
Sbjct: 54  TLLSCGQNPYGQ--LGRKSNNSS---IEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSW 108

Query: 394 GDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           GDG+ G LG GNL + +  PK++  L   K+  ++CG +H+ A+ +            G+
Sbjct: 109 GDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE-----------DGR 157

Query: 453 LFTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           +F+WG    G+LG   G + +    P  V  L     VQ + G   +  L+  G V+  G
Sbjct: 158 VFSWGQNKCGQLGL--GSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWG 215

Query: 510 SAVHGQLG---NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
               GQLG   +P         V   L+   V  IS G  H AVL+  GSVYT+G + +G
Sbjct: 216 KNNAGQLGFKSDPMKGTFKPHAVNS-LRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHG 274

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCG 596
           QLG     +   P  +E     QV  V CG
Sbjct: 275 QLGQNSGNQTSVPQKIEDYAG-QVSQVACG 303



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECL 311
           PK +       +  IS G  H+  ++++G VF WG+ K G+LG    + + + P+LV+ L
Sbjct: 128 PKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSL 187

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            GI +  V+ G  Q+ AL+ SG ++ WG NN G         +  + P  + ++L  + V
Sbjct: 188 KGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAV-NSLRNLGV 246

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           + ++CGE HTA++S  G ++T+GD T G LG  +    S P+++E   G +V  VACG +
Sbjct: 247 AYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRY 305

Query: 432 HTAAIV 437
           HT   V
Sbjct: 306 HTLLYV 311



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 29/287 (10%)

Query: 256 LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGI 314
           LE+  ++D   IS G  H+  V+ EG ++ WG+G +G+LG   ++     PK +  L   
Sbjct: 81  LEAQTIVD---ISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNT 137

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
            +  +SCG F + AL++ G +++WG N  G   +G +         +L  +L G+ + +V
Sbjct: 138 KIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQA--TPQLVKSLKGIPLVQV 195

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWH 432
             G   +  +S SG +F +G    G LG  +  ++   +P  V SLR L V  ++CG  H
Sbjct: 196 TAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEH 255

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF--DFVQAS 490
           TA +           +  G ++T+GD   G+LG   G +  +P    ++ D+     Q +
Sbjct: 256 TAVL-----------SKDGSVYTFGDDTHGQLGQNSGNQTSVP---QKIEDYAGQVSQVA 301

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           CGR  T     L  V++    V    G+ + +D +    E +L  EF
Sbjct: 302 CGRYHT-----LLYVFSCNRIVSFGKGSLRPQDNTECSDEAELPSEF 343


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G NN G   +G+   RS +     F +    ++ +++ G   +A ++ 
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR--KIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQV--TVGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G+L+T+G+ + G+LG  +       +P  V  +     VQ +CG   TV LT    
Sbjct: 207 --TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKA- 262

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VYT G    GQLG      + S+      +K++ +  I+ G  H A++T  G +YT+G  
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322

Query: 564 ANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            +G+LGLG  +S  +  PT         V+ V CG
Sbjct: 323 RHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 23/234 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G +   +V  P+ V    G  +  +SCG 
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGY 199

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  G++YT+G    G   +  +   +H +P+     + G+  +V +VACG  HT
Sbjct: 200 YHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQ----PVPGIPGKVVQVACGGGHT 255

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G  L   S PK +E ++  K+  +ACG  HTA I D+ 
Sbjct: 256 -VVLTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM- 313

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                     G ++T+GD   G+  LG  +   + +PT  +  + F     SCG
Sbjct: 314 ----------GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 31/291 (10%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +G     +VS+  T V AL P+ ++ A        + G  H  + T+ G+V+  G   
Sbjct: 65  GQLGLGSKSTVSK-PTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKVYAAGGNN 115

Query: 291 DGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG 349
           +G+LG     + S   L+    S   ++ +S G   + ALT+ GE++ WG N+ G   +G
Sbjct: 116 EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQ--IG 173

Query: 350 ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN--LQ 407
                +  +P+++     G  +S ++CG +H+A V+T GQL+T+G+   G LG  N  L 
Sbjct: 174 LENVTNVCVPQQV---TVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV 230

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG-H 466
           N   P+ V  + G KV  VACG  HT  + +  V            +T+G    G+LG  
Sbjct: 231 NHRMPQPVPGIPG-KVVQVACGGGHTVVLTEKAV------------YTFGLGQFGQLGLG 277

Query: 467 VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                  +P  +  + D      +CG   T  +T +G +YT G   HG+LG
Sbjct: 278 TFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 57/279 (20%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTA+V+ + +L+ +G   +G LG G+   VS+P  V++L+  KVK  ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 434 AA------------------------------IVDIMVDRCKSNAIG------------G 451
                                           ++     + K   +             G
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGQLYTFGEP 217

Query: 512 VHGQLGNPKA------KDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
             G+LG P          + +  + GK+ +     ++ G  H  VLT   +VYT+G    
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPGIPGKVVQ-----VACGGGHTVVLTE-KAVYTFGLGQF 271

Query: 566 GQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLGLG    E   P  +E ++D+++  + CG + TA I
Sbjct: 272 GQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310


>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
 gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
          Length = 1116

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 181/432 (41%), Gaps = 87/432 (20%)

Query: 282 EVFCWGEGKDGRLG--HKVNM------------------------DVSCPKLVECLSGIN 315
           E++ WG  + G+LG  H+ N                          ++ PK   C     
Sbjct: 14  EIYVWGNDEYGQLGLGHRYNQTSKQEQDLQNKNHSIISASYDETRKLNIPK--SCTFQTK 71

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHN--------NHGADLVGERRSRSHWLPRKLFDTLD 367
           ++ V+CGE  +C LT  G +Y+ G N        N        +    +    KL + L 
Sbjct: 72  IKEVACGEDHSCLLTLQGHVYSMGSNQFNKLGVKNLNTFQTSPKNGFEYSNTPKLVELLV 131

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--------NLQNVSQ----PKEV 415
              V  ++CG  HTA VS  G  FT+G   +G LG G        N  +V Q    P  V
Sbjct: 132 NYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNESSVFQQGIFPSIV 191

Query: 416 ESLR--GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGER 471
           E  +   +K+ +VACG  HT     + + R       G++++ GD   G+LG    D + 
Sbjct: 192 EFFQQNNIKIVNVACGGKHT-----LFLSR------NGQVYSMGDNSFGQLGIGMQDIQY 240

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEG 531
           K +PT V  L +    + S G   +  L+  G+++  G+ V G    PK       V++ 
Sbjct: 241 KDIPTRVPSLSNI--TKISSGHH-SAALSSSGQLFFWGTGVFGSFYEPKG------VIDS 291

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
            + +     +S G    A L   G ++TWG N+ G+LG+GD + R  P  V  L++++V 
Sbjct: 292 DIID-----VSVGGCFGAALDRDGLIWTWGSNSKGELGVGDFEPRPYPYPVTYLKNKKVN 346

Query: 592 SVVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFRRKKHNCYNCGLHFCSACSTKKIIN 651
            V CG S   AI   K       +S  + ++    +   HN Y          S+  + +
Sbjct: 347 KVACGGSFALAIGNSKDKDNLSNASNPKLQVQLDAQSMMHNNY----------SSSNLSH 396

Query: 652 ASLTPNKGKPSR 663
           A+ TP   +P R
Sbjct: 397 ANSTPYLNQPER 408



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 44/263 (16%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG------------HKVNM 300
           PKL+E  V  +V +IS G  H A V+ +G  F WG+ + G+LG              V  
Sbjct: 124 PKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNESSVFQ 183

Query: 301 DVSCPKLVECL--SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
               P +VE    + I + +V+CG   T  L+++G++Y+ G N+ G   +G +  +   +
Sbjct: 184 QGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDIQYKDI 243

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           P ++    +   ++K++ G  H+A +S+SGQLF +G G FG           +PK V   
Sbjct: 244 PTRVPSLSN---ITKISSGH-HSAALSSSGQLFFWGTGVFGSF--------YEPKGVID- 290

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKLLPT 476
                          + I+D+ V  C   A+   G ++TWG   KG LG  D E +  P 
Sbjct: 291 ---------------SDIIDVSVGGCFGAALDRDGLIWTWGSNSKGELGVGDFEPRPYPY 335

Query: 477 CVTRLVDFDFVQASCGRMLTVGL 499
            VT L +    + +CG    + +
Sbjct: 336 PVTYLKNKKVNKVACGGSFALAI 358


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 28/338 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++ 
Sbjct: 90  LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQR--KIKQLSAGSNTSAALTE 147

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N+ NV  P++V    G  +  ++CG +H+A +          
Sbjct: 148 DGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGYYHSAFVT--------- 196

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G+L+T+G+ + G+LG     ++LL     P  V  + +   VQ +CG   TV LT 
Sbjct: 197 --TEGELYTFGEPESGKLGL---PKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLTE 250

Query: 502 LGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
              VYT G    GQLG      +  +  V   +K+  +  I  G  H A++T  G +YT+
Sbjct: 251 KA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTF 309

Query: 561 GKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
           G   +G+LGLG  +   + TPT         V+ V CG
Sbjct: 310 GDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 347



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 23/234 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T++GE+F WG+  +G++G K   +V  P+ V    G  +  +SCG 
Sbjct: 132 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTV--GKPISWISCGY 189

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV--RVSKVACGEWHT 381
           + +  +T  GE+YT+G    G   + ++   +H +P+    ++ G+  +V +VACG  HT
Sbjct: 190 YHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQ----SVPGIPEKVVQVACGGGHT 245

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +V T   ++T+G G FG LG G  L     PK +E ++ LK+ S+ CG  HTA I D+ 
Sbjct: 246 -VVLTEKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDL- 303

Query: 441 VDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                     G ++T+GD   G+  LG  +   +  PT  +  + F     +CG
Sbjct: 304 ----------GLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 347



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 51/276 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTAIV+ + +L+ +G   +G LG G+   V++P  V++L+  KVK  ACG  HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 434 AA------------------------------IVDIMVDRCKSNAIG------------G 451
                                           ++     + K   +             G
Sbjct: 90  LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDG 149

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           +LF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 150 ELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI--SCGYYHSAFVTTEGELYTFGEP 207

Query: 512 VHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
             G+LG PK      R    V G + E+ V+ ++ G  H  VLT   +VYT+G    GQL
Sbjct: 208 ESGKLGLPKQLLVNHRMPQSVPG-IPEKVVQ-VACGGGHTVVLTE-KAVYTFGLGQFGQL 264

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG    E   P  +E ++D ++ S+ CG + TA I
Sbjct: 265 GLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 300



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 37/298 (12%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
           WG+  LG         S     T V AL P+ ++ A        + G  H  + T+ G+V
Sbjct: 54  WGQLGLGSK-------STVNKPTCVKALKPEKVKFA--------ACGRNHTLVSTEGGKV 98

Query: 284 FCWGEGKDGRLGHKVNMDVSCPKLVECL-SGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           +  G   +G+LG     + +   L+    S   ++ +S G   + ALT+ GE++ WG N+
Sbjct: 99  YASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNS 158

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G +   +  +P+++     G  +S ++CG +H+A V+T G+L+T+G+   G LG
Sbjct: 159 EGQ--IGLKNITNVCVPQQV---TVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLG 213

Query: 403 HGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDAD 460
                L N   P+ V  +   KV  VACG  HT  + +  V            +T+G   
Sbjct: 214 LPKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLTEKAV------------YTFGLGQ 260

Query: 461 KGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            G+LG         +P  +  + D       CG   T  +T LG +YT G   HG+LG
Sbjct: 261 FGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLG 318



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 3/124 (2%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM-DVSCPKLVECLSGINVQSVSCG 322
           V  ++ G  H  ++T E  V+ +G G+ G+LG    + +   PK++E +  + + S+ CG
Sbjct: 235 VVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCG 293

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           E  T  +T  G +YT+G   HG   +G     + + P    + L  + V  VACG  HT 
Sbjct: 294 ENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFI-VQLVACGGCHTL 352

Query: 383 IVST 386
           + +T
Sbjct: 353 VFAT 356



 Score = 46.6 bits (109), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            K +    +S G  H A++T    +Y +G N  GQLGLG       PT V+AL+  +V+ 
Sbjct: 22  FKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKF 81

Query: 593 VVCGSSIT 600
             CG + T
Sbjct: 82  AACGRNHT 89



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN--MDVSCPKLVE 309
           +PK++E    L + +I  G  H AL+T  G ++ +G+G+ G+LG  +    +   P L  
Sbjct: 275 VPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCS 334

Query: 310 CLSGINVQSVSCG 322
                 VQ V+CG
Sbjct: 335 NFLRFIVQLVACG 347


>gi|351710402|gb|EHB13321.1| Serine/threonine-protein kinase Nek8 [Heterocephalus glaber]
          Length = 709

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 42/357 (11%)

Query: 265 QNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
           + I  G    A+      V+ WG G            +S P  +  L+   V  V+ G  
Sbjct: 308 RGILRGPVRPAIPPPLSSVYAWGGG------------LSTPLRLPMLN-TEVIQVAVGRT 354

Query: 325 QTCALTKSGEIYTWGH----NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
           Q   +T+SG +  W      ++ GA L G           +  +   GV +  VACG+  
Sbjct: 355 QKAGITRSGRLILWEAPPLGSSGGALLPGAVEQPQPQFFSRFLEGQSGVTIKHVACGDLF 414

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  H  A   + 
Sbjct: 415 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA---LS 471

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
            +R        +LF WG  D+GRLG    E    P  V      +     CG   ++ LT
Sbjct: 472 TER--------ELFAWGRGDRGRLGLGTRESHSCPQQVPMPPGQEAQWVVCGIDSSMILT 523

Query: 501 GLGKVYTMGSAVHGQLG----------NPKAKDR---SITVVE-GKLKEEFVKGISSGSY 546
             G+    GS    +LG          +P+ +     S T +    L +E +  +  G+ 
Sbjct: 524 VRGRALACGSNRFNKLGLDHFSLGEEADPQQQVEEALSFTPLRSAPLDQEPLLIVDLGTA 583

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG + T AI
Sbjct: 584 HSAAVTASGDCYTFGSNQHGQLGTNARRGSRAPCQVQGLEGIKMAMVACGDAFTVAI 640



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 9/300 (3%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q      + LE    + +++++ G    A +T  
Sbjct: 365 LILWEAPPLGSSGGALLPGAVEQPQPQ---FFSRFLEGQSGVTIKHVACGDLFTACLTDR 421

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 422 GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 481

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R   SH  P+++     G     V CG   + I++  G+    G   F  
Sbjct: 482 GDRGRLGLGTR--ESHSCPQQV-PMPPGQEAQWVVCGIDSSMILTVRGRALACGSNRFNK 538

Query: 401 LG--HGNLQNVSQP-KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           LG  H +L   + P ++VE          A        IVD+      +    G  +T+G
Sbjct: 539 LGLDHFSLGEEADPQQQVEEALSFTPLRSAPLDQEPLLIVDLGTAHSAAVTASGDCYTFG 598

Query: 458 DADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
               G+LG         P  V  L        +CG   TV +   G+VY+ G    G+LG
Sbjct: 599 SNQHGQLGTNARRGSRAPCQVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGRLG 658



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 162/388 (41%), Gaps = 30/388 (7%)

Query: 227 GVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           G+L G +  A+   +S        L   L    +  +V  +++G    A +T+ G +  W
Sbjct: 309 GILRGPVRPAIPPPLSSVYAWGGGLSTPLRLPMLNTEVIQVAVGRTQKAGITRSGRLILW 368

Query: 287 GEGKDGRLGHKV---NMDVSCP----KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
                G  G  +    ++   P    + +E  SG+ ++ V+CG+  T  LT  G I T+G
Sbjct: 369 EAPPLGSSGGALLPGAVEQPQPQFFSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFG 428

Query: 340 HNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             ++G    G     S      + + L G  + +VACG  H   +ST  +LF +G G  G
Sbjct: 429 SGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDRG 485

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD---IMVDRCKSNAIGGKLFTW 456
            LG G  ++ S P++V    G + + V CG       +D   I+  R ++ A G   F  
Sbjct: 486 RLGLGTRESHSCPQQVPMPPGQEAQWVVCG-------IDSSMILTVRGRALACGSNRFNK 538

Query: 457 GDADKGRLG-------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
              D   LG        V+      P     L     +    G   +  +T  G  YT G
Sbjct: 539 LGLDHFSLGEEADPQQQVEEALSFTPLRSAPLDQEPLLIVDLGTAHSAAVTASGDCYTFG 598

Query: 510 SAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           S  HGQLG N +   R+   V+G L+   +  ++ G      + + G VY+WGK A G+L
Sbjct: 599 SNQHGQLGTNARRGSRAPCQVQG-LEGIKMAMVACGDAFTVAIGAEGEVYSWGKGARGRL 657

Query: 569 GLGDSQE-RETPTFVEALRDRQVESVVC 595
           G  D       P  ++ +    V SV C
Sbjct: 658 GRRDEDAGLPRPVQLDEMHPYTVTSVSC 685



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVY---------TMGSAVHGQLGNPKAKDRSITVVEG 531
           +++ + +Q + GR    G+T  G++          + G+ + G +  P+ +  S   +EG
Sbjct: 341 MLNTEVIQVAVGRTQKAGITRSGRLILWEAPPLGSSGGALLPGAVEQPQPQFFS-RFLEG 399

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G    A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 400 Q-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 458

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD+      R+  G  R+ H+C
Sbjct: 459 QVACGASHVLALSTERELFAWGRGDRG-----RLGLG-TRESHSC 497


>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
 gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
          Length = 575

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 167/380 (43%), Gaps = 51/380 (13%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            L+P + E    L    ++ G     +VT +G ++  G G+DGRLG      V  P+ + 
Sbjct: 202 VLVPTVNEIMSNLKPNMMTAGLGCTFIVTNDGCIYVCGHGQDGRLGLGTVNHVVIPRPIH 261

Query: 310 CLSGIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS------------- 355
               I  V S  CG+    ALT +G + +WG N +G    G  R  +             
Sbjct: 262 LKVFITKVASFYCGQ-HALALTGNGIVLSWGSNIYGQLGHGHCRYFTASQLATMSSCNIS 320

Query: 356 -----------HWLPRKL-FDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH 403
                       W+   +  DT+    +  +ACG   +A +S SG+LFT+G G  G LGH
Sbjct: 321 KPLLSFFFLNLLWMESYMVIDTISSKHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGH 380

Query: 404 GNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           G+ +    PK+VE+ +   V  VACG WH  AIV+             ++++WG    G+
Sbjct: 381 GDTETYKLPKKVEAFKDYHVSKVACGCWHMLAIVN-----------QNRIWSWGHGHYGQ 429

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD 523
           LG+      L P  V +L    + +  CG  ++  L+  G +++ G       G+    +
Sbjct: 430 LGNGQSANCLQPILVEQLPHILWAKVICGWDISFALSQDGYIWSWGYN-----GDFMVNE 484

Query: 524 RSITVVE-----GKLKEEFVKGISSGSY--HVAVLTSGGSVYTWGKNANGQLGLG-DSQE 575
            S  +V+      +L ++  K +  G+   H   L + G +Y WG N  G+LG G D ++
Sbjct: 485 CSRLIVDEPQLLYRLADQDKKIVDLGASNCHCVALAADGELYLWGANDKGRLGNGSDIKD 544

Query: 576 RETPTFVEALRDRQVESVVC 595
              P    AL D ++  + C
Sbjct: 545 CNFPKPCTALADVKLTHLGC 564



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 42/305 (13%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
           ++ K   +Y WG N + + L G        L   + + +  ++ + +  G   T IV+  
Sbjct: 174 SVEKKTTVYAWGANRY-SQLGGINLKEDTVLVPTVNEIMSNLKPNMMTAGLGCTFIVTND 232

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           G ++  G G  G LG G + +V  P+ +   +   KV S  CG  H  A+          
Sbjct: 233 GCIYVCGHGQDGRLGLGTVNHVVIPRPIHLKVFITKVASFYCGQ-HALALTG-------- 283

Query: 447 NAIGGKLFTWGDADKGRLGH------VDGERKLLPTC----------------------V 478
               G + +WG    G+LGH         +   + +C                      +
Sbjct: 284 ---NGIVLSWGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVI 340

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFV 538
             +     V  +CG   +  ++  G+++T G    G LG+   +   +       K+  V
Sbjct: 341 DTISSKHIVDIACGSDSSAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEAFKDYHV 400

Query: 539 KGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSS 598
             ++ G +H+  + +   +++WG    GQLG G S     P  VE L       V+CG  
Sbjct: 401 SKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWD 460

Query: 599 ITAAI 603
           I+ A+
Sbjct: 461 ISFAL 465



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LPK +E+     V  ++ G  H   +  +  ++ WG G  G+LG+  + +   P LVE L
Sbjct: 388 LPKKVEAFKDYHVSKVACGCWHMLAIVNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQL 447

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD-GVR 370
             I    V CG   + AL++ G I++WG+N  G  +V E        P+ L+   D   +
Sbjct: 448 PHILWAKVICGWDISFALSQDGYIWSWGYN--GDFMVNECSRLIVDEPQLLYRLADQDKK 505

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACG 429
           +  +     H   ++  G+L+ +G    G LG+G ++++ + PK   +L  +K+  + C 
Sbjct: 506 IVDLGASNCHCVALAADGELYLWGANDKGRLGNGSDIKDCNFPKPCTALADVKLTHLGCV 565

Query: 430 PWHTAA 435
             H  A
Sbjct: 566 AAHCTA 571


>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 163/395 (41%), Gaps = 29/395 (7%)

Query: 203 VTPTYGSPLIERKDILKD-VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVM 261
           V+PT     +    +  D V+ WG+ + G  +G   DG+ + + T +   LP        
Sbjct: 39  VSPTAAQNTLSPSTVGSDTVLAWGDNLFG-QLG---DGTGADSDTPIPVSLPP------G 88

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
             V  I+ G +H+  +T  G V  WG  + G+LG + N   S P  V    G  V +++ 
Sbjct: 89  TTVTAIAAGDEHSLALTSTGTVLAWGRNRFGQLGDETNTSRSTPVTVSLPPGTTVTAIAA 148

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   + A+T +G    WG N  G   +G+  +     P  + +   G  V+ +A G+ H+
Sbjct: 149 GRSHSLAITSTGSALAWGRNFSGQ--LGDGTTNDSNKPVAV-NLPPGTTVTAIAAGDGHS 205

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             V+++G    +G    G LG G   + + P  V    G  V  +A G  H+ AI     
Sbjct: 206 LAVTSAGTALAWGRNFAGQLGDGTTNDSTTPVTVSVAPGTTVTDIAAGRVHSLAITS--- 262

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    G    WG    G+LG         PT V+      F   + G   ++ +T 
Sbjct: 263 --------AGTALGWGRNGSGQLGDGTTNDSTTPTTVSPPTGTVFTTVAAGEDHSLAVTS 314

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            G     G  ++GQLG+      +  V         +  I+ G +H   +T+ G+   WG
Sbjct: 315 AGTALAAGDNLYGQLGDGTNTSSNTFVTVSLPPSTTITAIAVGRFHNLGVTATGAALAWG 374

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            N +GQLG G +  R TP  V    D  V + V G
Sbjct: 375 INIDGQLGDGTTTNRNTPQAV----DLPVSTTVAG 405



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 43/101 (42%)

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V   G  + GQLG+    D    +         V  I++G  H   LTS G+V  WG+N
Sbjct: 57  TVLAWGDNLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTSTGTVLAWGRN 116

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
             GQLG   +  R TP  V       V ++  G S + AI 
Sbjct: 117 RFGQLGDETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAIT 157


>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
 gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
          Length = 1711

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 174/374 (46%), Gaps = 84/374 (22%)

Query: 253  PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS---CPKLVE 309
            P L ++AV      +S G +H AL+T+EG V+ WG+   GRLGH   +  S    P  VE
Sbjct: 862  PPLSQAAV------VSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVE 914

Query: 310  CLS--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
             LS   + V +V+CG+  T AL  +G +Y WG + +G   +G+   ++H     L   L 
Sbjct: 915  TLSIQRVQVMAVACGQEHTLALCDNG-VYAWGSSTYGQLGLGDWDRQTH---PTLVTQLK 970

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
             V    VA G++H+A +   G+++ +G G  G LG GN +N+++P  V +++      V+
Sbjct: 971  DVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQ--NAVQVS 1028

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
             G  HTA +              G++FT+G    G+LGH   ++  +P  V  ++     
Sbjct: 1029 TGYAHTAVLTR-----------SGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVA 1076

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQ-----LGNPKAKDRSITV-------------- 528
            Q +CG   TV +T   +VYT G   H Q     L N + + R+ T               
Sbjct: 1077 QVACGLFHTVVVTSSQQVYTFGR--HPQVWKQYLQNSRRQARASTSYTQSPAKHAMGLSG 1134

Query: 529  -----------VEGKLKEEFVKGISSGSYHVAVLTSG-----------------GSVYTW 560
                       VEG++++     + +G+ H  +LTS                  G V+ W
Sbjct: 1135 ELFKPLWVQCRVEGRIRQ-----VVAGAVHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVW 1189

Query: 561  GKNANGQLGLGDSQ 574
            G+N++GQLG+   Q
Sbjct: 1190 GRNSHGQLGIDMKQ 1203



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 29/239 (12%)

Query: 374  VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS---QPKEVESL--RGLKVKSVAC 428
            V+CG+ H A+++  G ++T+G    G LGHG L   S    P  VE+L  + ++V +VAC
Sbjct: 870  VSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVAC 928

Query: 429  GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ 488
            G  HT A+ D              ++ WG +  G+LG  D +R+  PT VT+L D   V 
Sbjct: 929  GQEHTLALCD------------NGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCVA 976

Query: 489  ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKA----KDRSITVVEGKLKEEFVKGISSG 544
             + G+  +  L G G+V+  G  VHGQLG   A    K   +  V+  ++      +S+G
Sbjct: 977  VATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQNAVQ------VSTG 1030

Query: 545  SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              H AVLT  G V+T+G   +GQLG G + +   P  V+ +  + V  V CG   T  +
Sbjct: 1031 YAHTAVLTRSGEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMGK-VAQVACGLFHTVVV 1088



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 51/251 (20%)

Query: 221  VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
            V +WG GV G    G  +   + NK       P L+ +AV   VQ +S G  H A++T+ 
Sbjct: 993  VWMWGWGVHGQLGQGNAE---NLNK-------PHLV-AAVQNAVQ-VSTGYAHTAVLTRS 1040

Query: 281  GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
            GEVF +G G  G+LGH     VS P+ V+ + G  V  V+CG F T  +T S ++YT+G 
Sbjct: 1041 GEVFTFGCGLHGQLGHGATDKVSIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYTFG- 1098

Query: 341  NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
                       R    W  + L ++    R S           +  SG+LF         
Sbjct: 1099 -----------RHPQVW-KQYLQNSRRQARASTSYTQSPAKHAMGLSGELF--------- 1137

Query: 401  LGHGNLQNVSQPKEVESLRGLKVKSVACGPWH----TAAIVDIMVDRCKSNAI--GGKLF 454
                      +P  V+     +++ V  G  H    T+++V I      S A+   GK++
Sbjct: 1138 ----------KPLWVQCRVEGRIRQVVAGAVHNMLLTSSVVAIAAGEDFSVAVDRSGKVW 1187

Query: 455  TWGDADKGRLG 465
             WG    G+LG
Sbjct: 1188 VWGRNSHGQLG 1198



 Score = 47.4 bits (111), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 14/123 (11%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLG----LGDSQERETPTFVEALRDR--QVESVV 594
           +S G  HVA+LT  G VYTWGK   G+LG    LGDS     P  VE L  +  QV +V 
Sbjct: 870 VSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSG-YVPPMRVETLSIQRVQVMAVA 927

Query: 595 CGSSITAAICLHKSISVGDQSSCSQCRMPFG-FRRKKHNCYNCGLH--FCSACSTKKIIN 651
           CG   T A+C +   + G   S +  ++  G + R+ H      L   FC A +T +  +
Sbjct: 928 CGQEHTLALCDNGVYAWG---SSTYGQLGLGDWDRQTHPTLVTQLKDVFCVAVATGQYHS 984

Query: 652 ASL 654
           A+L
Sbjct: 985 AAL 987


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 164/383 (42%), Gaps = 74/383 (19%)

Query: 231 GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGK 290
           G +G +VD + +    +V AL  K++         +I+ G  H+A +T +GE++ WG+  
Sbjct: 96  GQLGVSVDKNYTTEPLEVSALPKKII---------HIAAGYYHSAAITADGELYMWGKNS 146

Query: 291 DGR--LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH-------N 341
           +G+  LG K    VS P  VECL+GI+++ V+ G   + A T  GE  +WG        +
Sbjct: 147 NGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGRLGH 206

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
            H + L+G  R+ S + PR L   L+G++V  VA G  H+A +  +G +F +G+      
Sbjct: 207 GHESSLLGFFRTSSEYRPR-LIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKF 265

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
           G    +N + P  +  L     K VACG +HT  I              G+LFTWG  + 
Sbjct: 266 GFREAKNATAPSMISELP--YSKQVACGGYHTCVISS-----------SGELFTWGSNEN 312

Query: 462 GRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
           G LG    E    P  +      + V Q SCG   T  ++  G V+T G           
Sbjct: 313 GCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAIS-EGNVFTWGWG--------- 362

Query: 521 AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT 580
                                  GSY        G+    G ++ GQLG G   +   P 
Sbjct: 363 -----------------------GSY--------GTFSDDGHSSGGQLGQGSDVDHIKPK 391

Query: 581 FVEALRDRQVESVVCGSSITAAI 603
            VE     +   V CG + T AI
Sbjct: 392 MVEFEESVRALQVSCGFNHTGAI 414



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 147/337 (43%), Gaps = 42/337 (12%)

Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
           WG G  GRLG         P +       ++ +++CG   T  LT+SG +Y  G N+ G 
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQ 97

Query: 346 DLVGERRSRS------HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
             V   ++ +        LP+K+           +A G +H+A ++  G+L+ +G  + G
Sbjct: 98  LGVSVDKNYTTEPLEVSALPKKII---------HIAAGYYHSAAITADGELYMWGKNSNG 148

Query: 400 VLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
            LG G      VS P +VE L G+ +K VA G  H+ A  D            G+  +WG
Sbjct: 149 QLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQ-----------GEALSWG 197

Query: 458 DADKGRLGHVDGERKLL----------PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
               GRLGH   E  LL          P  + RL        + G + +  +   G V+ 
Sbjct: 198 AGGSGRLGHGH-ESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFI 256

Query: 508 MGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
            G     + G  +AK+ +   +  +L   + K ++ G YH  V++S G ++TWG N NG 
Sbjct: 257 FGERAMDKFGFREAKNATAPSMISELP--YSKQVACGGYHTCVISSSGELFTWGSNENGC 314

Query: 568 LGLGDSQERETPTFVEA-LRDRQVESVVCGSSITAAI 603
           LG+G  +    P  +E       V  V CG   TAAI
Sbjct: 315 LGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI 351



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 17/200 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+     + V+N++ G  H+A + + G VF +GE    + G +   + + P ++  L 
Sbjct: 224 PRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELP 283

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
               + V+CG + TC ++ SGE++TWG N +G   +G   +     P ++        VS
Sbjct: 284 --YSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIH--FPERIEGPFSKNPVS 339

Query: 373 KVACGEWHTAIVSTSGQLFTYG----DGTF--------GVLGHGNLQNVSQPKEVESLRG 420
           +V+CG  HTA +S  G +FT+G     GTF        G LG G+  +  +PK VE    
Sbjct: 340 QVSCGWKHTAAIS-EGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEES 398

Query: 421 LKVKSVACGPWHTAAIVDIM 440
           ++   V+CG  HT AI++ +
Sbjct: 399 VRALQVSCGFNHTGAILEYI 418



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 34/254 (13%)

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G+G FG LG G+L++  +P    +     + ++ACG  HT  + +            G 
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTE-----------SGC 86

Query: 453 LFTWGDADKGRLG-HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           ++  G  D G+LG  VD      P  V+ L     +  + G   +  +T  G++Y  G  
Sbjct: 87  VYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK-KIIHIAAGYYHSAAITADGELYMWGKN 145

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISS-----GSYHVAVLTSGGSVYTWGKNANG 566
            +GQLG  K    +++V     K E + GIS      GS H    T  G   +WG   +G
Sbjct: 146 SNGQLGLGKKAANAVSVPS---KVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSG 202

Query: 567 QLGLGD---------SQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSC 617
           +LG G          +     P  +  L   +V++V  G   +A I  + S+ +  + + 
Sbjct: 203 RLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAM 262

Query: 618 SQCRMPFGFRRKKH 631
            +    FGFR  K+
Sbjct: 263 DK----FGFREAKN 272


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 48/358 (13%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G +H AL+TK G +F +G    G+LG    + V+ P  V+ L    V   +CG   T
Sbjct: 31  ISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNHT 90

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T  G +++ G N+ G   +G+   R+ +      D+L  +++  +A G   +A ++ 
Sbjct: 91  LICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKM--LAAGSNTSAALTE 148

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           SG+LF +GD T G +G G   +   P+EV    G  V  V+CG +H+A +          
Sbjct: 149 SGKLFMWGDNTEGQIGLGKESHAPWPQEVSV--GAPVSWVSCGYYHSALVT--------- 197

Query: 447 NAIGGKLFTWGDADKGRLGHVDGE--RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG- 503
               G L+T+G+ D G+LG    +  R  +P  V R +     Q +CG   TV LTG G 
Sbjct: 198 --AAGALYTFGERDSGKLGLTTEQLPRHRVPQPV-RSIGEPVRQVACGGGHTVALTGGGS 254

Query: 504 ------------------------KVYTMGSAVHGQLGNPK--AKDRSITVVEGKLKEEF 537
                                   +++T G    GQLG+     + R   +VE   K+  
Sbjct: 255 TRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVE-HFKKGR 313

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESV 593
           V+ ++ G  H AV+T GG +YT+G   +G+LGLGD     +  PT         V++V
Sbjct: 314 VRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLKYGVQAV 371



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 35/244 (14%)

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           S+++CG+ HTA+++ +G+LF +G   +G LG G+   V++P  V++L+  KV   ACG  
Sbjct: 29  SQISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRN 88

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV---- 487
           HT          C      G++F+ G   +G+LG  D E +   T   R+   D +    
Sbjct: 89  HTLI--------CTGE---GRVFSSGGNSEGQLGLGDCEER---TTFRRIHALDSLGPIK 134

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG------NPKAKDRSITVVEGKLKEEFVKGI 541
             + G   +  LT  GK++  G    GQ+G       P  ++ S+           V  +
Sbjct: 135 MLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHAPWPQEVSVGAP--------VSWV 186

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSI 599
           S G YH A++T+ G++YT+G+  +G+LGL   Q      P  V ++ +  V  V CG   
Sbjct: 187 SCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGE-PVRQVACGGGH 245

Query: 600 TAAI 603
           T A+
Sbjct: 246 TVAL 249



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           LK +    IS G  H A++T  G ++ +G N  GQLGLG       PT V+AL+  +V  
Sbjct: 23  LKNDVPSQISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLL 82

Query: 593 VVCGSSITAAIC 604
             CG + T  IC
Sbjct: 83  AACGRNHT-LIC 93


>gi|209875367|ref|XP_002139126.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209554732|gb|EEA04777.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 1864

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 160/347 (46%), Gaps = 49/347 (14%)

Query: 282 EVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQSVSCGEFQTCALTKS-----GEI 335
           +++ WGE  +  LG  ++ D V  P  V   S  +V  VSCG   T  L KS     G++
Sbjct: 59  QLYAWGENTNNVLGFGIDTDKVDLPTRVPFFSIYDVFQVSCGYLHTAVLIKSITESGGKV 118

Query: 336 YTWGHNNHGADLVGERRSRSHW-LPRKLFDTLD--------------GVRVSKVACGEWH 380
           YT G  N G   +G  RS + + L  +  D  +                ++S++ CG  H
Sbjct: 119 YTMGLGNRGR--LGYTRSDTEFGLEEEYLDKNESWYSISPCIVKFPSNTKISRICCGANH 176

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE-SLRGLKVKSVACGPWHTAAIVDI 439
           T  +S +G L+++G G FG LG G+ ++V  P ++E S   LKV+ +A G  H+      
Sbjct: 177 TLALSDNGHLYSWGVGQFGCLGTGSTEDVFFPTKIEISNNSLKVQHIAAGSRHSLC---- 232

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRL--GHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
               C  N   G LF WG    GRL  G V+G  KL PT V  ++ +       G   + 
Sbjct: 233 ----CTEN---GNLFAWGSNANGRLGIGGVNG-IKLKPTIVQSMLPYHVCFVVTGEAHSG 284

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-VVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            +  +G V+T G+  +GQLG+    D  I   V G     FV+ ++ G++    LT  G 
Sbjct: 285 CIDRMGIVFTWGNGSNGQLGHGLQLDCPIPRKVHGISSIPFVQ-LAFGAFISMGLTQSGD 343

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           VY WG   +        +   TPT V++ +   +  + CG  I+ AI
Sbjct: 344 VYIWGSKQH--------EIFSTPTKVKSFKS-AICHIACGPYISFAI 381



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 21/262 (8%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGA--------DLVGERRSRSHWLPRKLFDTLD 367
           V+ ++CGE     LT  G +YTWG N++G         DL GE  +++     +  +   
Sbjct: 491 VRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDL-GETSNKNKTFVSEPNEVKF 549

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
              + +VACG WHT     SG  FT+G G +G LG G + N+ +P  + SL    V  V 
Sbjct: 550 SGPIRRVACGYWHTLCCDYSGNCFTWGRGDYGQLGTGAICNMYEPVGIISLN--NVIDVY 607

Query: 428 CGPWHTAAIV--DIMVDRCKSNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLV 482
            G  ++A I+   I + +       G L+ WG+ D G+LG    V+G+    P  +   +
Sbjct: 608 GGESYSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGLGDDVNGKCIAAPRYLN--L 665

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL--GNPKAKDRSITVVEGKLKEEFVKG 540
            +  V+ S G + T+ LT  G + T G+  +G+L  G     +R I +++  + +  +  
Sbjct: 666 GYPIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGTTNNHNRPI-IIKFPIGDVRISD 724

Query: 541 ISSGSYHVAVLTSGGSVYTWGK 562
           I+ G+ H   ++  G ++ WGK
Sbjct: 725 IAVGTDHSMAVSVDGDLWIWGK 746



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 44/318 (13%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE--- 280
           WGE      +G  +D        +VD  LP  +    + DV  +S G  H A++ K    
Sbjct: 63  WGENT-NNVLGFGID------TDKVD--LPTRVPFFSIYDVFQVSCGYLHTAVLIKSITE 113

Query: 281 --GEVFCWGEGKDGRLGHKVN----------MDVS------CPKLVECLSGINVQSVSCG 322
             G+V+  G G  GRLG+  +          +D +       P +V+  S   +  + CG
Sbjct: 114 SGGKVYTMGLGNRGRLGYTRSDTEFGLEEEYLDKNESWYSISPCIVKFPSNTKISRICCG 173

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T AL+ +G +Y+WG    G   +G   +   + P K+  + + ++V  +A G  H+ 
Sbjct: 174 ANHTLALSDNGHLYSWGVGQFGC--LGTGSTEDVFFPTKIEISNNSLKVQHIAAGSRHSL 231

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
             + +G LF +G    G LG G +  +  +P  V+S+    V  V  G  H+  I     
Sbjct: 232 CCTENGNLFAWGSNANGRLGIGGVNGIKLKPTIVQSMLPYHVCFVVTGEAHSGCI----- 286

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
           DR       G +FTWG+   G+LGH       +P  V  +    FVQ + G  +++GLT 
Sbjct: 287 DRM------GIVFTWGNGSNGQLGHGLQLDCPIPRKVHGISSIPFVQLAFGAFISMGLTQ 340

Query: 502 LGKVYTMGSAVHGQLGNP 519
            G VY  GS  H     P
Sbjct: 341 SGDVYIWGSKQHEIFSTP 358



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 166/384 (43%), Gaps = 58/384 (15%)

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           L P +++S +   V  +  G  H+  + + G VF WG G +G+LGH + +D   P+ V  
Sbjct: 260 LKPTIVQSMLPYHVCFVVTGEAHSGCIDRMGIVFTWGNGSNGQLGHGLQLDCPIPRKVHG 319

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           +S I    ++ G F +  LT+SG++Y WG   H                 ++F T   V+
Sbjct: 320 ISSIPFVQLAFGAFISMGLTQSGDVYIWGSKQH-----------------EIFSTPTKVK 362

Query: 371 -----VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN--VSQPKEVESLRGLKV 423
                +  +ACG + +  +      +++ +         +++N  VS  +E   L+ +  
Sbjct: 363 SFKSAICHIACGPYISFAIDVRSIAYSWNNRIIA----QSIKNRDVSNIEEELVLKRMNN 418

Query: 424 KSVACGPWHT-AAIVD---IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL------ 473
            +    P+   ++ VD    ++  C  ++ G K+    +     LG V   R++      
Sbjct: 419 PNPVVLPFFQGSSFVDDAIFLMGFCLVDSNGNKM----NYTAKELGGVYCTRRIYGPNND 474

Query: 474 ---LPTCVTRLVDFDFV-QASCGRMLTVGLTGLGKVYTMGSAVHGQLGN-------PKAK 522
              L + + + +  + V Q +CG    + LT  G VYT G   +GQLG         +  
Sbjct: 475 SSGLGSLIYKSLPPNTVRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDLGETS 534

Query: 523 DRSITVVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETP 579
           +++ T V    + +F   ++ ++ G +H       G+ +TWG+   GQLG G       P
Sbjct: 535 NKNKTFVSEPNEVKFSGPIRRVACGYWHTLCCDYSGNCFTWGRGDYGQLGTGAICNMYEP 594

Query: 580 TFVEALRDRQVESVVCGSSITAAI 603
             + +L +  V  V  G S +A I
Sbjct: 595 VGIISLNN--VIDVYGGESYSACI 616



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 34/339 (10%)

Query: 249 DALLPKLLE-SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPK 306
           D   P  +E S   L VQ+I+ G++H+   T+ G +F WG   +GRLG   VN     P 
Sbjct: 204 DVFFPTKIEISNNSLKVQHIAAGSRHSLCCTENGNLFAWGSNANGRLGIGGVNGIKLKPT 263

Query: 307 LVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL 366
           +V+ +   +V  V  GE  +  + + G ++TWG+ ++G   +G        +PRK+   +
Sbjct: 264 IVQSMLPYHVCFVVTGEAHSGCIDRMGIVFTWGNGSNGQ--LGHGLQLDCPIPRKV-HGI 320

Query: 367 DGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV 426
             +   ++A G + +  ++ SG ++ +G     +         S P +V+S +   +  +
Sbjct: 321 SSIPFVQLAFGAFISMGLTQSGDVYIWGSKQHEIF--------STPTKVKSFKS-AICHI 371

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR-LGHVDGERKLLPTCVTRLVDFD 485
           ACGP+ + AI    +    +N I  +      + K R + +++ E  L        V   
Sbjct: 372 ACGPYISFAIDVRSIAYSWNNRIIAQ------SIKNRDVSNIEEELVLKRMNNPNPVVLP 425

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVH---GQLGNPKAKDRSI----------TVVEGK 532
           F Q S      + L G   V + G+ ++    +LG      R            +++   
Sbjct: 426 FFQGSSFVDDAIFLMGFCLVDSNGNKMNYTAKELGGVYCTRRIYGPNNDSSGLGSLIYKS 485

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
           L    V+ I+ G  H  +LT GG VYTWG N+ GQLG+G
Sbjct: 486 LPPNTVRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIG 524



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 38/280 (13%)

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN------------V 409
           ++ +L    V ++ACGE H  +++  G ++T+GD ++G LG G+L              V
Sbjct: 482 IYKSLPPNTVRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDLGETSNKNKTFV 541

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDG 469
           S+P EV+   G  ++ VACG WHT          C  +   G  FTWG  D G+LG    
Sbjct: 542 SEPNEVK-FSG-PIRRVACGYWHTLC--------CDYS---GNCFTWGRGDYGQLGTGAI 588

Query: 470 ERKLLPTCVTRL---VDFDFVQASCGRMLTVGLT--------GLGKVYTMGSAVHGQLGN 518
                P  +  L   +D    ++    ++  G+T          G ++  G+   G+LG 
Sbjct: 589 CNMYEPVGIISLNNVIDVYGGESYSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGL 648

Query: 519 PKAKDRSITVVEGKLKEEF-VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               +         L   + +  +S G+ H   LT+ G++ TWG    G+LG+G +    
Sbjct: 649 GDDVNGKCIAAPRYLNLGYPIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGTTNNHN 708

Query: 578 TPTFVE-ALRDRQVESVVCGSSITAAICLHKSISVGDQSS 616
            P  ++  + D ++  +  G+  + A+ +   + +  ++S
Sbjct: 709 RPIIIKFPIGDVRISDIAVGTDHSMAVSVDGDLWIWGKAS 748



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 143/347 (41%), Gaps = 54/347 (15%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ ++ G  H       G  F WG G  G+LG     ++  P  V  +S  NV  V  GE
Sbjct: 553 IRRVACGYWHTLCCDYSGNCFTWGRGDYGQLGTGAICNMYEP--VGIISLNNVIDVYGGE 610

Query: 324 -FQTCALT------------KSGEIYTWGHNNHGADLVGER-RSRSHWLPRKLFDTLDGV 369
            +  C +              SG+++ WG+ + G   +G+    +    PR L     G 
Sbjct: 611 SYSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGLGDDVNGKCIAAPRYLNL---GY 667

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVAC 428
            + KV+ G  HT  ++ +G L T+G G +G LG G   N ++P  ++   G +++  +A 
Sbjct: 668 PIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGTTNNHNRPIIIKFPIGDVRISDIAV 727

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRL------ 481
           G  H+ A+           ++ G L+ WG A       V  E  +L P    +L      
Sbjct: 728 GTDHSMAV-----------SVDGDLWIWGKASV-----VLNETDVLQPHIFAKLESATGV 771

Query: 482 --VDFDFVQASCGRMLTVGLTGLGKVYTMG-SAVHGQLGNPKAKDRSITVVEGK----LK 534
             V   +  A     ++  +T  G+++T G  ++  Q      K        G+    L 
Sbjct: 772 PKVYSVYAHAD----ISYAITNTGELWTWGPESLDTQKKRKMKKKDKDYSHTGRTELVLL 827

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTF 581
              V G+S GS H   L   G V +WG   +G+LG   ++ +   +F
Sbjct: 828 PGSVAGVSGGSCHSMCLLVTGEVLSWGSTESGRLGQNTTKSQSYVSF 874



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 48/230 (20%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG------------HKVNMDVSCPKLVECL 311
           V+ I+ G  H  L+T  G V+ WG+   G+LG            +K    VS P  V+  
Sbjct: 491 VRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDLGETSNKNKTFVSEPNEVK-F 549

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           SG  ++ V+CG + T     SG  +TWG  ++G   +G     + + P  +    +   V
Sbjct: 550 SG-PIRRVACGYWHTLCCDYSGNCFTWGRGDYGQ--LGTGAICNMYEPVGIISLNN---V 603

Query: 372 SKVACGEWHTA-IVST------------SGQLFTYGDGTFGVLGHGNLQN---VSQPKEV 415
             V  GE ++A I++T            SG L+ +G+G FG LG G+  N   ++ P+ +
Sbjct: 604 IDVYGGESYSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGLGDDVNGKCIAAPRYL 663

Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
               G  +  V+ G  HT A+              G L TWG    GRLG
Sbjct: 664 N--LGYPIVKVSLGTVHTLAL-----------TANGNLITWGAGYYGRLG 700


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 140/281 (49%), Gaps = 24/281 (8%)

Query: 230 GGDI---GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCW 286
           GG++   GG  DG +    T+      ++        ++ +S G+  +A +T++GE++ W
Sbjct: 191 GGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMW 250

Query: 287 GEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           G+  +G++G     +V  P  V  + G  V  VSCG + +  +T  GE+YT+G   +G  
Sbjct: 251 GDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKL 308

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN- 405
            +   + ++H +P +L   + G +V++VACG  HT +  T   ++T+G G FG LG G  
Sbjct: 309 GLSSEQLKNHRIP-QLVPGISG-KVNQVACGGGHT-VALTEEDVYTFGLGEFGQLGLGTC 365

Query: 406 LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR-- 463
           +   S PK VE LR  K+  VACG  HTA I D            G ++T+GD   G+  
Sbjct: 366 IFETSVPKVVEHLRKQKIHYVACGENHTALISDT-----------GLMYTFGDGRHGKLG 414

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCG--RMLTVGLTGL 502
           LG  +   + +PT  +  + F     +CG   ML   +  L
Sbjct: 415 LGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVFAIPRL 455



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 165/368 (44%), Gaps = 27/368 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A VT   +++  G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 126 LSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G +Y  G N+ G   +G+   R+ +     F +    ++ +++ G   +A ++ 
Sbjct: 186 LVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSR--YKIKQLSAGSNTSAALTE 243

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+L+ +GD + G +G  +  NV  P  V  + G  V  V+CG +H+A +          
Sbjct: 244 DGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVT--------- 292

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G+L+T+G+ + G+LG    + K   +P  V   +     Q +CG   TV LT    
Sbjct: 293 --TDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPG-ISGKVNQVACGGGHTVALTE-ED 348

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VYT G    GQLG      + S+  V   L+++ +  ++ G  H A+++  G +YT+G  
Sbjct: 349 VYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDG 408

Query: 564 ANGQLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAICLHK-----SISVGDQSS 616
            +G+LGLG+     +  PT         V  V CG        + +      I+V + S 
Sbjct: 409 RHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVFAIPRLKGSEEIAVEEFSE 468

Query: 617 CSQCRMPF 624
           C      F
Sbjct: 469 CGDLTTTF 476



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 34/286 (11%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G +    ++  +      WL     DTL     ++++CG+ HTA V+ + +L+
Sbjct: 97  SGAVFTFGKSKFAENIPSK-----FWLRN---DTL-----AQLSCGDEHTAFVTGNSKLY 143

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
             G   +G LG G+   V++P  V++L+  KVK  ACG  HT    +           GG
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTE-----------GG 192

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVD-FDFVQASCGRMLTVGLTGLGKVYTMGS 510
            ++  G    G+LG  D E +     ++     +   Q S G   +  LT  G++Y  G 
Sbjct: 193 NVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGD 252

Query: 511 AVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
              GQ+G     +  +   VV GK     V  +S G YH A++T+ G +YT+G+  NG+L
Sbjct: 253 NSEGQIGLASESNVCVPCRVVIGKP----VSWVSCGYYHSALVTTDGELYTFGEPENGKL 308

Query: 569 GLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
           GL   Q      P  V  +  + V  V CG   T A+      + G
Sbjct: 309 GLSSEQLKNHRIPQLVPGISGK-VNQVACGGGHTVALTEEDVYTFG 353



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 26/260 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCG 322
           V+  + G  H  + T+ G V+  G   DG+LG        +  ++    S   ++ +S G
Sbjct: 175 VKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAG 234

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              + ALT+ GE+Y WG N+ G   +G     +  +P ++   + G  VS V+CG +H+A
Sbjct: 235 SNTSAALTEDGELYMWGDNSEGQ--IGLASESNVCVPCRV---VIGKPVSWVSCGYYHSA 289

Query: 383 IVSTSGQLFTYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +V+T G+L+T+G+   G LG  +  L+N   P+ V  + G KV  VACG  HT A+ +  
Sbjct: 290 LVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED 348

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGE---RKLLPTCVTRLVDFDFVQASCGRMLTV 497
           V            +T+G  + G+LG   G       +P  V  L        +CG   T 
Sbjct: 349 V------------YTFGLGEFGQLGL--GTCIFETSVPKVVEHLRKQKIHYVACGENHTA 394

Query: 498 GLTGLGKVYTMGSAVHGQLG 517
            ++  G +YT G   HG+LG
Sbjct: 395 LISDTGLMYTFGDGRHGKLG 414


>gi|198435791|ref|XP_002121699.1| PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family
           member (nekl-1) [Ciona intestinalis]
          Length = 1265

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 40/310 (12%)

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG--ERRSRSHWLPRKLFDTLDGV 369
           S + ++ V+ G      +T    +Y+WG N +G    G  E  ++ H     + + L G 
Sbjct: 579 SKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPH-----VIEALKGK 633

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            ++  +CG   +  V+ +G L T GDG+ G LG GNL + ++P  VE L  + V +VACG
Sbjct: 634 PITTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACG 693

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             H  A+           +  G+++ WG   +GRLG    +  + P  V   ++      
Sbjct: 694 DAHVVAL-----------SSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVA--INQAIRDV 740

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS--ITVVEGKLKE------------ 535
            CG   T+ +T +G +   G+  + +LG     +R+  I +   +LK+            
Sbjct: 741 RCGHDGTMFITDVGTLLACGNNQYNKLG---LNERTGFIMMFNNRLKKTEVECRKTPTVV 797

Query: 536 EFVKG---ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
           + +KG   ++ G +H  VLT    V   G N  GQ+G GD++ R +P  V+ ++D  V  
Sbjct: 798 KSIKGVVDVAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMV 857

Query: 593 VVCGSSITAA 602
           V CG++ TA 
Sbjct: 858 VACGNTYTAV 867



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 20/309 (6%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           + ++ +++G  H  +VT E  V+ WGE   G+LGH     V+ P ++E L G  + + SC
Sbjct: 581 VKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSC 640

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   +  +T +G + T G  + G   +G+    S   P  + + L  V VS VACG+ H 
Sbjct: 641 GSNFSVFVTDNGILLTCGDGSQGC--LGQGNLSSTTRP-SMVEPLLSVDVSTVACGDAHV 697

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI-- 439
             +S+ G+++ +G G+ G LG G+  +  +P  V   +   ++ V CG   T  I D+  
Sbjct: 698 VALSSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVAINQA--IRDVRCGHDGTMFITDVGT 755

Query: 440 -------MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                    ++   N   G +  + +    RL   + E +  PT V  +     V  + G
Sbjct: 756 LLACGNNQYNKLGLNERTGFIMMFNN----RLKKTEVECRKTPTVVKSIK--GVVDVAMG 809

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
           R  T  LT   +V  +GS   GQ+G    K R+   +   +K+  V  ++ G+ + AV T
Sbjct: 810 RHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNTYTAVGT 869

Query: 553 SGGSVYTWG 561
           S   V  WG
Sbjct: 870 SNNIVLYWG 878



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 34/260 (13%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P ++E+     +   S G+  +  VT  G +   G+G  G LG       + P +VE L 
Sbjct: 624 PHVIEALKGKPITTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLL 683

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            ++V +V+CG+    AL+  GEIY WG  + G    G      H +          +R  
Sbjct: 684 SVDVSTVACGDAHVVALSSEGEIYAWGCGSQGRLGTGH---DDHCIEPHRVAINQAIR-- 738

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLG-----------HGNLQNVS-----QPKEVE 416
            V CG   T  ++  G L   G+  +  LG           +  L+         P  V+
Sbjct: 739 DVRCGHDGTMFITDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVK 798

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           S++G  V  VA G  HT  + +             ++   G   +G++G  D + +  P 
Sbjct: 799 SIKG--VVDVAMGRHHTTVLTE-----------SNQVLMLGSNKEGQMGTGDNKLRTSPY 845

Query: 477 CVTRLVDFDFVQASCGRMLT 496
            V  + D+D +  +CG   T
Sbjct: 846 LVKCIKDYDVMVVACGNTYT 865



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 48/81 (59%)

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
           D  +T +EG   +  ++ ++ G+ HV V+T+   VY+WG+NA GQLG G  +    P  +
Sbjct: 568 DMHLTPIEGLPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVI 627

Query: 583 EALRDRQVESVVCGSSITAAI 603
           EAL+ + + +  CGS+ +  +
Sbjct: 628 EALKGKPITTTSCGSNFSVFV 648


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 140/307 (45%), Gaps = 31/307 (10%)

Query: 281 GEVFCWGEGKDGRLGHKVN-------------MDVSCPKLVECLSGINVQSVSCGEFQTC 327
           G VF WG   +GRLG  +N             +    P +V+  + I +  VSCG   T 
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG---VRVSKVACGEWHTAIV 384
           AL++ G +Y+WG  N G   +G+        P  +    +G     +  +ACG  H   +
Sbjct: 266 ALSQEGHVYSWGLGNSGG--LGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
              G ++++G+G  G LGHG+    + PKE+  LR  K+  +  G   +AAI        
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAI-------- 375

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
              +I  +LF WG    GRLG       L P  +  L D      + G   ++ +   GK
Sbjct: 376 ---SIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGK 432

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEG--KLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
               GS+  G+LG   A DR+ T  +    L +E +  I++G +H   LT  G +Y++G 
Sbjct: 433 AMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGN 492

Query: 563 NANGQLG 569
           + +G+LG
Sbjct: 493 SKDGKLG 499



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 39/319 (12%)

Query: 221 VMIWG---EGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALV 277
           V  WG   EG LG  +      ++ Q   ++    P +++    + +  +S G      +
Sbjct: 208 VFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLAL 267

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG----INVQSVSCGEFQTCALTKSG 333
           ++EG V+ WG G  G LG         P +++         N++ ++CG     +L   G
Sbjct: 268 SQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQG 327

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +Y+WG N  G  L G        +P+++   L   ++  +  GE  +A +S   +LF +
Sbjct: 328 IVYSWG-NGQGGRL-GHGDETGENIPKEII-GLRQYKILMIEAGEGSSAAISIKNELFIW 384

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G G  G LG G   NV +P  +E L+  KV+ +A G  H+  I+             GK 
Sbjct: 385 GVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILR-----------NGKA 433

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTR-------LVDFD---FVQASCGRMLTVGLTGLG 503
             WG +  G+LG        L T + R       LV  D     Q + G   ++ LT  G
Sbjct: 434 MCWGSSKDGKLG--------LETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENG 485

Query: 504 KVYTMGSAVHGQLGNPKAK 522
           ++Y+ G++  G+LG  + K
Sbjct: 486 EIYSFGNSKDGKLGYDEIK 504



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 139/321 (43%), Gaps = 43/321 (13%)

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
           + ++ VS G F   A+T  G  + WG N++G   +G R+      P ++    D V +  
Sbjct: 675 MKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMG-RKDTVVSKPTRIKSLQDKV-IIM 732

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-------QPKEV----------- 415
            A GE H+  +S  G++   G   FG LG G L + S        P E+           
Sbjct: 733 TASGESHSLFLSDLGEVLCSGFNEFGELGIG-LNSTSGGADKKENPDEIYDENYQRQLIE 791

Query: 416 -------ESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
                  + ++GL+ +  +A G  H+ AI      + K  A+  KLFTWG    G+ GH 
Sbjct: 792 TKIELTPKIIKGLESIGFIAAGKNHSIAI---RTYKRKEKAM--KLFTWGCGWHGQTGHG 846

Query: 468 DGERKLLPTCVTR--LVDFDFVQASCGRMLTVGLTGLGKVYTMG---SAVHGQLGNPKAK 522
             +   LP  V    L D  F+QASCG   T+ L   G ++  G   S       + K  
Sbjct: 847 SWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFNDEKQF 906

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
             +      K++E F K ISSG  H   +T  G VY +GKN N ++   +S  +E   F 
Sbjct: 907 MPARLETPSKIQEPF-KFISSGEEHNLAVTQSGLVYGFGKNTNTKI---NSSHKEYLYFD 962

Query: 583 EALRDRQVESVVCGSSITAAI 603
           +   + +     CG++ +  I
Sbjct: 963 QVENEEKAVLTACGANHSVLI 983



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 31/262 (11%)

Query: 332 SGEIYTWGHNNHG--------ADLVGERRSRSHWLPRK----LFDTLDGVRVSKVACGEW 379
           +G ++TWG  N G         ++    +  +  +P K     FD    + + KV+CG  
Sbjct: 205 NGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDA--SIIIIKVSCGNS 262

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRG----LKVKSVACGPWHTA 434
            T  +S  G ++++G G  G LG G  QNVS  P  ++  +       +K +ACG  H  
Sbjct: 263 FTLALSQEGHVYSWGLGNSGGLGQGE-QNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVL 321

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           ++              G +++WG+   GRLGH D   + +P  +  L  +  +    G  
Sbjct: 322 SLDH-----------QGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEG 370

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +  ++   +++  G  +HG+LG  K  +    V+   LK++ V+ I+ GS H   +   
Sbjct: 371 SSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRN 430

Query: 555 GSVYTWGKNANGQLGLGDSQER 576
           G    WG + +G+LGL  + +R
Sbjct: 431 GKAMCWGSSKDGKLGLETALDR 452



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 161/375 (42%), Gaps = 59/375 (15%)

Query: 255  LLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSG 313
            +   AV + ++++S G  H   VT EG  F WG   +G+LG  + +  VS P  ++ L  
Sbjct: 668  IYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQD 727

Query: 314  INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVG--------ERRSRSHWL-----PR 360
              +   + GE  +  L+  GE+   G N  G   +G        +++     +      R
Sbjct: 728  KVIIMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQR 787

Query: 361  KLFDT--------LDGVR-VSKVACGEWHTAIVST------SGQLFTYGDGTFGVLGHGN 405
            +L +T        + G+  +  +A G+ H+  + T      + +LFT+G G  G  GHG+
Sbjct: 788  QLIETKIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGS 847

Query: 406  LQNVSQPK--EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
             QN   P+  +V  L+  K    +CG  HT A+              G ++ +G      
Sbjct: 848  WQNDYLPQIVKVPVLKDTKFIQASCGSKHTIAL-----------DTTGHIWFFGYKPSVG 896

Query: 464  LGHVDGERKLLPTCV---TRLVD-FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
            +   + E++ +P  +   +++ + F F+  S G    + +T  G VY  G   + ++ + 
Sbjct: 897  IEDFNDEKQFMPARLETPSKIQEPFKFI--SSGEEHNLAVTQSGLVYGFGKNTNTKINSS 954

Query: 520  KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL----GDSQE 575
              +      VE    EE     + G+ H  ++ + G  YTWG   NG+ GL     D+Q+
Sbjct: 955  HKEYLYFDQVEN---EEKAVLTACGANHSVLIDTKGVPYTWGFVGNGRCGLKLEKDDAQQ 1011

Query: 576  RE----TPTFVEALR 586
             +     PT +  ++
Sbjct: 1012 EQESLSAPTVIYFMK 1026



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 158/398 (39%), Gaps = 66/398 (16%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           ++ I+  A ++  + +EG V+ WG GK G LG+ K    +S P  ++  S   +   S  
Sbjct: 2   LRKIACNATNSGAIDQEGNVYVWGAGKYGLLGNPKQKNPISKPIKLQLKSEKLILDYSSE 61

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG-VRVSKVACGEWHT 381
           +         G+        HG  +V +  + S + P     T+ G  +   + C  W T
Sbjct: 62  QTFVATSLSFGQY-------HGVVVVNDINTNSDFNPLLYAQTILGEFKAFLMRC--WDT 112

Query: 382 AIVSTSGQLFTYGDGTFGVLGH---GNLQNVSQPKE-------VESLRGLKVKSVACGPW 431
               T  +L  +    +    H     L+   + +E       ++SL+ L V        
Sbjct: 113 ----TVKKLPEHSSDVYATEEHIIENTLKFCFKKEEKYFPQVKLDSLKQLMVYQAKLSFK 168

Query: 432 HTAAIVDIMVDRCKSN-------------AIG-----GKLFTWGDADKGRLGHVDGERKL 473
            T +   +  D    N              IG     G +FTWG  ++GRLG    E+++
Sbjct: 169 DTVSYNRMFQDLADPNDEDKINLKELRDQLIGRRCGNGIVFTWGVVNEGRLGIALNEKEI 228

Query: 474 ---------LPTCVTRLVDFD----FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK 520
                    L      +V FD     ++ SCG   T+ L+  G VY+ G    G LG   
Sbjct: 229 ENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQG- 287

Query: 521 AKDRSITVVEGKLKEE-------FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
             ++++++    +K +        +K I+ GS HV  L   G VY+WG    G+LG GD 
Sbjct: 288 --EQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDE 345

Query: 574 QERETPTFVEALRDRQVESVVCGSSITAAICLHKSISV 611
                P  +  LR  ++  +  G   +AAI +   + +
Sbjct: 346 TGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFI 383



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 11/219 (5%)

Query: 397 TFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW---HTAAIVDIMVDRCKSNAIG--- 450
           T+GV+  G L      KE+E++     + +   P      A+I+ I V    S  +    
Sbjct: 210 TWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQ 269

Query: 451 -GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQ----ASCGRMLTVGLTGLGKV 505
            G +++WG  + G LG  +    + P  +    +    Q     +CG    + L   G V
Sbjct: 270 EGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIV 329

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y+ G+   G+LG+      +I      L++  +  I +G    A ++    ++ WG   +
Sbjct: 330 YSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWGVGLH 389

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           G+LG G +     P  +E L+D++VE +  GS+ +  I 
Sbjct: 390 GRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL 428


>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
 gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
          Length = 1261

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 22/268 (8%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSC 321
           ++V  I+ G+ H+ ++TK G V  WG    G+LG   N  V     V     + VQ ++C
Sbjct: 76  IEVSAIACGSSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVPDKKPLFVQ-IAC 134

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G   + ALT  G IY+WG N +G   + E  + S+        ++ G+ ++ +ACG  H 
Sbjct: 135 GNEHSLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHC 194

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++S S  ++ +G    G LG  +L +   P E+ +LR   V+ VACG   +  +     
Sbjct: 195 FLISKSSAVYGWGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRYVACGDEFSVFLTH--- 251

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV---- 497
                    G LFT GD   G+LGH +    L P  V +L D    Q +C +  T+    
Sbjct: 252 --------KGALFTCGDGTHGQLGHGNLSNALAPFKVMKLRDKPVTQVACAKHYTLAFVP 303

Query: 498 ------GLTGLGKVYTMGSAVHGQLGNP 519
                 G   LGK+YT+   ++G   +P
Sbjct: 304 SIGQLYGFGQLGKIYTLPGKINGPWISP 331



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 146/308 (47%), Gaps = 30/308 (9%)

Query: 264 VQNISLGAKHAALVTKEGEVF-CWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +++I+ G ++   +T +G+V+ C   G+      +  +  S  +LV  L  I V +++CG
Sbjct: 27  LRDIAFGDRYTLFLTAKGKVYECETHGQVHNTRKRSRL--SPFRLVAGLQDIEVSAIACG 84

Query: 323 EFQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRK--LFDTLDGVRVSKVACGE 378
              +  LTKSG + +WG N+ G        R      +P K  LF         ++ACG 
Sbjct: 85  SSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVPDKKPLF--------VQIACGN 136

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHG---NLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            H+  ++  G ++++G   +G LG     N+ N   P  + S+ G+ + ++ACG  H   
Sbjct: 137 EHSLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFL 196

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRML 495
           I        KS+A+ G    WG  ++G+LG  D   +  PT +T L        +CG   
Sbjct: 197 I-------SKSSAVYG----WGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRYVACGDEF 245

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS-YHVAVLTSG 554
           +V LT  G ++T G   HGQLG+    +        KL+++ V  ++    Y +A + S 
Sbjct: 246 SVFLTHKGALFTCGDGTHGQLGHGNLSNALAPFKVMKLRDKPVTQVACAKHYTLAFVPSI 305

Query: 555 GSVYTWGK 562
           G +Y +G+
Sbjct: 306 GQLYGFGQ 313



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 123/291 (42%), Gaps = 19/291 (6%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ ++ G+  T  LT  G++Y      HG   V   R RS   P +L   L  + VS +A
Sbjct: 27  LRDIAFGDRYTLFLTAKGKVYEC--ETHGQ--VHNTRKRSRLSPFRLVAGLQDIEVSAIA 82

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H+ +++ SG + ++G    G LG      V    +V   + L V+ +ACG  H+ A
Sbjct: 83  CGSSHSLVLTKSGVVMSWGVNDCGQLGQTTNSRVPTMVKVPDKKPLFVQ-IACGNEHSLA 141

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLPTCVTRLVDFDFVQASCG 492
           + +            G +++WG    G+LG  + E       P  +T +        +CG
Sbjct: 142 LTN-----------DGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACG 190

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
                 ++    VY  G    GQLG     DR        L+   V+ ++ G      LT
Sbjct: 191 GNHCFLISKSSAVYGWGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRYVACGDEFSVFLT 250

Query: 553 SGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
             G+++T G   +GQLG G+      P  V  LRD+ V  V C    T A 
Sbjct: 251 HKGALFTCGDGTHGQLGHGNLSNALAPFKVMKLRDKPVTQVACAKHYTLAF 301



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 241 VSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
           +S+ +   +   P  L S   + +  I+ G  H  L++K   V+ WG    G+LG     
Sbjct: 161 MSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLISKSSAVYGWGRNNRGQLGLNDLS 220

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
           D   P  +  L    V+ V+CG+  +  LT  G ++T G   HG   +G     +   P 
Sbjct: 221 DRPYPTELTTLRPCGVRYVACGDEFSVFLTHKGALFTCGDGTHGQ--LGHGNLSNALAPF 278

Query: 361 KLFDTLDGVRVSKVACGEWHT-AIVSTSGQLFTYG 394
           K+    D   V++VAC + +T A V + GQL+ +G
Sbjct: 279 KVMKLRDK-PVTQVACAKHYTLAFVPSIGQLYGFG 312


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 155/345 (44%), Gaps = 43/345 (12%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI---NVQSVSCGEFQT 326
           G  H+ +V  +G V+ WG+   G+LG   N     P  V   SG     V  V+ GE  +
Sbjct: 63  GGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHS 122

Query: 327 CALTKSGEIYTWGHNNHGA---DLVGERRSRSHWLPRKL--FDTLDGVRVSKVACGEWHT 381
            ALT  GE++TWG N+ G        ERRS     P K+    T     +   ACG  H+
Sbjct: 123 LALTAKGEVWTWGDNSKGQLGDGFFYERRS-----PVKVRHIRTNPLENIVGAACGGKHS 177

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV----ESLRGLKVKSVACGPWHTAAIV 437
             V++ G ++ +G  + G +G G L+N   P++V    + L G  VK+VA G  H+ A+ 
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAG--VKAVAAGFAHSLAL- 234

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF---DFVQASCGRM 494
                     ++ G ++ WGD + G+LG      +  P  V   VD    + V  + GR 
Sbjct: 235 ----------SVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRA 284

Query: 495 LTVGLTGLGKVYTMGSAVHGQLG----NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
            ++ LT  G+V+  G+   GQLG    N   +D         +  + V+ I++   H   
Sbjct: 285 FSLALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLA 344

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
           L + GSV  WG    GQLG G     + PT         + SV+C
Sbjct: 345 LMNDGSVLAWGAGDRGQLGQGAQNHEDHPTLAS------LHSVIC 383



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 19/229 (8%)

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK---VKSVACGPW 431
           A G +H+ +V   G ++ +GD + G LG G  +    P  V    G     V  VA G  
Sbjct: 61  AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGER 120

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF---DFVQ 488
           H+ A+              G+++TWGD  KG+LG      +  P  V  +      + V 
Sbjct: 121 HSLALT-----------AKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVG 169

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF--VKGISSGSY 546
           A+CG   ++ +   G V+  GS   GQ+G+   K+R       +  +    VK +++G  
Sbjct: 170 AACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFA 229

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVC 595
           H   L+  G+V+ WG N  GQLG     +R+ P  V    DR +++VV 
Sbjct: 230 HSLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVA 278



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%)

Query: 503 GKVYTMGSAVHGQLG--NPKAKDRSITVVE--GKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           G V+  G    GQLG    KA    + V+   G      +K +++G  H   LT+ G V+
Sbjct: 74  GTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLK-VAAGERHSLALTAKGEVW 132

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVV---CGSSITAAIC 604
           TWG N+ GQLG G   ER +P  V  +R   +E++V   CG   + A+ 
Sbjct: 133 TWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVA 181



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 252 LPKLLESAVML-DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
           LP    + V L  V+ I+   +H+  +  +G V  WG G  G+LG         P L   
Sbjct: 319 LPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQGAQNHEDHPTLASL 378

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
            S   V  ++ G + + A+ ++G +  WG N  G   +G+     H LP K
Sbjct: 379 HS---VICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKADKNFHALPEK 426


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 24/337 (7%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFV--------- 205

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 206 --TTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
             VYT G    GQLG      + S   V   ++++ +  IS G  H A++T  G +YT+G
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 562 KNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
              +G+LGLG  +      PT         V+ V CG
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|133777119|gb|AAH99988.1| NIMA (never in mitosis gene a)-related kinase 8 [Danio rerio]
          Length = 697

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 43/338 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G            +S P  +  L+   +Q VS G  Q   +TKSG + TW   +
Sbjct: 322 VYTWGSG------------ISTPLRLPMLNTEVIQ-VSLGRTQKMGVTKSGRLITWEAPS 368

Query: 343 HGA---DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            G+    L G           +  +   GV +  V+CG+  T  ++  G + T+G G+ G
Sbjct: 369 VGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNG 428

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHGN  +V+QPK VE+L G ++  V+CG  H  A+ +   +R        ++F+WG  
Sbjct: 429 CLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTN---ER--------EVFSWGRG 477

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           D GRLG    +    P  V+   DF+  +  CG   ++ ++   ++   G+    +LG  
Sbjct: 478 DNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLD 537

Query: 520 KA----KDRSITVVE----------GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           K     +  S   VE            L  E +  I  G+ H   +T  G  +T+G N +
Sbjct: 538 KVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQH 597

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG    +    P  V  L+   +    CG + T AI
Sbjct: 598 GQLGCSHRRSSRVPYQVSGLQG--ITMAACGDAFTLAI 633



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 16/295 (5%)

Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           + G+V Q + Q    + + LE    + ++++S G      +T  G +  +G G +G LGH
Sbjct: 376 LPGAVEQMQPQ---FISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGH 432

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               DV+ PK+VE L G  +  VSCG     A+T   E+++WG  ++G   +G     SH
Sbjct: 433 GNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR--LGLATQDSH 490

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK--- 413
             P+++    D     +V CG   + I+ST  Q+   G+  F  LG   +    +P    
Sbjct: 491 NCPQQVSLPAD-FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFC 549

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGER 471
           +VE +   ++  V   P +T  IV I +    S A+   G+ FT+G    G+LG      
Sbjct: 550 QVEEVHLFQL--VQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRS 607

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             +P  V+ L       A+CG   T+ +   G+VYT G    G+LG  K +D  I
Sbjct: 608 SRVPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTWGKGARGRLGR-KEEDSGI 659



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 140/334 (41%), Gaps = 50/334 (14%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS-CPKLVECLSGINV 316
           +V  +SLG      VTK G +  W     G G+    G    M      + +E  SG+ +
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTI 400

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           +SVSCG+  T  LT  G I T+G  ++G   +G         P K+ + L G  + +V+C
Sbjct: 401 KSVSCGDLFTTCLTDRGIIMTFGSGSNGC--LGHGNFNDVTQP-KIVEALLGYELVQVSC 457

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLG------HGNLQNVSQPKEVESLRGLKVKSVACGP 430
           G  H   V+   ++F++G G  G LG      H   Q VS P + E+ R      V CG 
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR------VLCG- 510

Query: 431 WHTAAIVD---IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC-VTRLVDFDF 486
                 VD   IM  + +  A G   F     DK     V G  +    C V  +  F  
Sbjct: 511 ------VDCSMIMSTQHQILACGNNRFNKLGLDK-----VSGTEEPSSFCQVEEVHLFQL 559

Query: 487 VQAS-----------CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
           VQ++            G   +V +T  G+ +T GS  HGQLG    +   +      L+ 
Sbjct: 560 VQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG 619

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +   + G      + + G VYTWGK A G+LG
Sbjct: 620 --ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 32/231 (13%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           +++ + +Q S GR   +G+T  G++ T  +   G  G P     ++  ++ +    F++G
Sbjct: 337 MLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPG-AVEQMQPQFISRFLEG 394

Query: 541 --------ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
                   +S G      LT  G + T+G  +NG LG G+  +   P  VEAL   ++  
Sbjct: 395 QSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQ 454

Query: 593 VVCGSSITAAICLHKSI-------------SVGDQSSC-SQCRMPFGFRRKKHNC-YNCG 637
           V CG+S   A+   + +             +  D  +C  Q  +P  F  ++  C  +C 
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCS 514

Query: 638 L-----HFCSACSTKKIINASLTPNKG--KPSRVCDTCYNHLQKITHSGRL 681
           +     H   AC   +     L    G  +PS  C     HL ++  S  L
Sbjct: 515 MIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPL 565


>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
           mellifera]
          Length = 502

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 20/272 (7%)

Query: 195 PKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK 254
           PK  S+  +   YG+   E   + KD M++        +G    G +    TQ   L PK
Sbjct: 17  PKFISNIHMAVVYGNIGNEALIVTKDKMVYA-------VGSNTSGCLGIGDTQ-STLYPK 68

Query: 255 LLESAVMLDVQNISLG-AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
            ++     D++  + G   H   +T+EG+V+ WG+     LG+  N     P ++  L  
Sbjct: 69  KIKELCGKDIKTFAYGKGPHVLALTEEGKVYSWGQNCHYELGNTFNNQALTPGIITNLCN 128

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             +  ++CG   + ALT  GE+Y WG N  G     +  +    +PRKL  TL G +V  
Sbjct: 129 EFIIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVIC 188

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+  + +V+ +G+++++G    G LG  N  +   P ++ SL  + ++ V CG  HT
Sbjct: 189 ISCGDSFSVVVTNNGEVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHT 248

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG 465
            A+ D            G L+ WGD + G+LG
Sbjct: 249 LALSD-----------EGVLYVWGDNNYGQLG 269



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 21/228 (9%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW-HTAAIVDIMV 441
           IV+    ++  G  T G LG G+ Q+   PK+++ L G  +K+ A G   H  A+ +   
Sbjct: 38  IVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTE--- 94

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTG 501
                    GK+++WG      LG+    + L P  +T L +   +  +CG   ++ LT 
Sbjct: 95  --------EGKVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTN 146

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF------VKGISSGSYHVAVLTSGG 555
            G+VY  G    GQ+G     D +  V +   K  F      V  IS G     V+T+ G
Sbjct: 147 DGEVYAWGQNTSGQVG---CHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNG 203

Query: 556 SVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            VY+WG N  GQLG+ ++ ++  P  + +L    +E VVCGS  T A+
Sbjct: 204 EVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHTLAL 251



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 22/248 (8%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTS 387
           +TK   +Y  G N  G   +G+ +S  +  P+K+   L G  +   A G+  H   ++  
Sbjct: 39  VTKDKMVYAVGSNTSGCLGIGDTQSTLY--PKKI-KELCGKDIKTFAYGKGPHVLALTEE 95

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
           G+++++G      LG+        P  + +L    +  +ACG  H+ A+ +         
Sbjct: 96  GKVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTN--------- 146

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF-----VQASCGRMLTVGLTGL 502
              G+++ WG    G++G  D     L   + R ++F       +  SCG   +V +T  
Sbjct: 147 --DGEVYAWGQNTSGQVGCHDDTT--LVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNN 202

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           G+VY+ G    GQLG     D+        L +  ++ +  GS H   L+  G +Y WG 
Sbjct: 203 GEVYSWGCNDVGQLGIENNNDQFHPCKITSLAKIVIEKVVCGSIHTLALSDEGVLYVWGD 262

Query: 563 NANGQLGL 570
           N  GQLGL
Sbjct: 263 NNYGQLGL 270



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY----HVAVLTSGGSVYTW 560
           VY +GS   G LG     D   T+   K+KE   K I + +Y    HV  LT  G VY+W
Sbjct: 45  VYAVGSNTSGCLG---IGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEEGKVYSW 101

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC 620
           G+N + +LG   + +  TP  +  L +  +  + CGS  + A+     +    Q++  Q 
Sbjct: 102 GQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWGQNTSGQV 161

Query: 621 --------------RMPFGFRRKKHNCYNCGLHF 640
                         ++ F    KK  C +CG  F
Sbjct: 162 GCHDDTTLVQDIPRKLNFTLTGKKVICISCGDSF 195


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 17/277 (6%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTS 387
           +T + EI+  G N  G   +G+ +S     PR+L D+L G +++ ++ G   H  + +T 
Sbjct: 47  MTVNDEIFVLGTNCCGCLGLGDIQSTIE--PRRL-DSLSGKKIACLSYGSGPHIVLATTE 103

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           G++FT+G   +  LG+G   + S P  + + L   +V  VACG +H+  +          
Sbjct: 104 GEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTS-------- 155

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLGKV 505
               G++F WG  + G++G      + +P  VT  L +   V  +CG+M ++ +   G+V
Sbjct: 156 ---DGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEV 212

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  G   +GQLG   + + S       L+   V+ ++ G  H  VLT  G VY WG N+ 
Sbjct: 213 YVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSY 272

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           GQLG G+   +  PT V   +DR +E   C S+ T+A
Sbjct: 273 GQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 309



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 122/260 (46%), Gaps = 16/260 (6%)

Query: 253 PKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC- 310
           P+ L+S     +  +S G+  H  L T EGEVF WG     +LG+      S P  +   
Sbjct: 75  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           LS   V  V+CG + +  LT  GE++ WG NN G   VG   + +  +PR++   L    
Sbjct: 135 LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQ--VGSGSTANQPIPRRVTGCLQNRV 192

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +ACG+  +  V  SG+++ +G    G LG G+  N S P  + +L+G++V+ VACG 
Sbjct: 193 VVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGY 252

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT  + D            G+++ WG    G+LG  +   +  PT V    D     A+
Sbjct: 253 AHTLVLTD-----------DGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAA 301

Query: 491 CGRMLT-VGLTGLGKVYTMG 509
           C    T    T  G VY  G
Sbjct: 302 CHSTHTSAAKTQGGHVYMWG 321



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 136/292 (46%), Gaps = 22/292 (7%)

Query: 277 VTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEI 335
           +T   E+F  G    G LG         P+ ++ LSG  +  +S G      L T  GE+
Sbjct: 47  MTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEV 106

Query: 336 YTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGD 395
           +TWGHN +  + +G   +    +P  +   L   +V +VACG +H+ ++++ G++F +G 
Sbjct: 107 FTWGHNAY--NQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGC 164

Query: 396 GTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
              G +G G+  N   P+ V   L+   V ++ACG   + A+VD            G+++
Sbjct: 165 NNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVD-----------SGEVY 213

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
            WG    G+LG         P  +  L      + +CG   T+ LT  G+VY  G+  +G
Sbjct: 214 VWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYG 273

Query: 515 QLGNPKAKDRSI---TVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGK 562
           QLG     ++S     VVE   K+  ++  +  S H  A  T GG VY WG+
Sbjct: 274 QLGTGNKSNQSYPTPVVVE---KDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 322



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 16/224 (7%)

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK--SVACGPWHTAAIVDIMV 441
           ++ + ++F  G    G LG G++Q+  +P+ ++SL G K+   S   GP    A  +   
Sbjct: 47  MTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE--- 103

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLT 500
                    G++FTWG     +LG+       +P  + T L +   ++ +CG   ++ LT
Sbjct: 104 ---------GEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLT 154

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             G+V+  G    GQ+G+    ++ I   V G L+   V  I+ G      +   G VY 
Sbjct: 155 SDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYV 214

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           WG N NGQLGLG S    TP  + AL+  +V+ V CG + T  +
Sbjct: 215 WGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVL 258


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 181/398 (45%), Gaps = 51/398 (12%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISL---GAKHAALVTKEGEVFCWGEGK 290
           G   DG +   + + D  LP+LL+         ISL   G  H   +T +G+V  WG G 
Sbjct: 18  GAGTDGQLGTTRLE-DEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 76

Query: 291 DGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            G+LGH   +    PK V+ L    +  VS G   +  ++ +G ++T G  + G   +G 
Sbjct: 77  SGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQ--LGH 134

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG--HGNLQN 408
              +SH  P K+    D   V ++ACG  H+ ++    Q++ +G G  G LG    N ++
Sbjct: 135 GDCKSHCSPVKV-SYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDNTRS 193

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD 468
           +S P+    L G+++ S+     H+AA+           +  G L+TWG       G   
Sbjct: 194 ISVPQATVGLEGVEIISIDANGDHSAAL-----------SANGHLYTWGR------GFGS 236

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK--AKDRSI 526
                 P C+   + F  V      ML   LTG G+V+ +G   HG LG+P+  ++ + +
Sbjct: 237 TSDVHCPRCLPSSLCFTQVALGWNHMLV--LTGGGEVFMLGGNRHGVLGDPQKGSQVKHL 294

Query: 527 TVVEGKLKE---------EFVKG--------ISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           +V+E  L           E V+G        I++G+ H A++T    + TWG   +GQLG
Sbjct: 295 SVIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLG 354

Query: 570 LGDSQERETPTFVEALR----DRQVESVVCGSSITAAI 603
           LG++ ++ +P  V           +  V CGS  T AI
Sbjct: 355 LGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 392



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 16/220 (7%)

Query: 389 QLFTYGDGTFGVLGHGNLQNVSQPKEVESLR---GLKVKSVACGPWHTAAIVDIMVDRCK 445
           +++++G GT G LG   L++   P+ ++  R      +  +ACG  H  A+         
Sbjct: 13  EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALT-------- 64

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                GK+ TWG    G+LGH D    L P  V  L  F     S G   +  ++  G +
Sbjct: 65  ---TDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCL 121

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +T G    GQLG+   K     V       + V  I+ G  H  VL  G  VY +G    
Sbjct: 122 FTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKR 181

Query: 566 GQLGLGDSQER--ETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG+     R    P     L   ++ S+      +AA+
Sbjct: 182 GQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAAL 221


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 170/337 (50%), Gaps = 28/337 (8%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           DV  I+ G  ++  + K+G V+CWG  +  ++    N D S P  ++ L   +V +++ G
Sbjct: 146 DVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLK--DVVAIAAG 203

Query: 323 EFQTCALTKSGEIYTWGHN-NHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWH 380
           +  + AL K G ++ W +  N+   L   RR    + P  +   ++G++ V  +A G +H
Sbjct: 204 KDYSLALKKDGTVWMWEYKYNYYEQL---RRGADEYSPVPV--QVEGLKDVVAIAAGRYH 258

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
           +  +   G ++ +G+  +G LG+G  ++   P +V++L+   V ++A G  H+ A+    
Sbjct: 259 SLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLK--DVVAIAAGENHSLAL---- 312

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
               K +   G ++ WGD + G+LG+   E+  +P     L D   + A C   L   L 
Sbjct: 313 ----KKD---GTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSLA--LK 363

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G V++ G+  +GQLGN  + D  + V    LK+  V  I++G+ H   L   G+V+ W
Sbjct: 364 KDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD--VVAIATGNAHSLALKKDGTVWAW 421

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           G N  GQLG G ++    P  V+ L+D  V ++  GS
Sbjct: 422 GNNEFGQLGNGTNKSSFVPVQVKGLKD--VVAIAAGS 456



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 163/341 (47%), Gaps = 31/341 (9%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK---VNM 300
           N T   + +P  ++   + DV  I+ G+ H+    K+G V+ WG  + G+LG+       
Sbjct: 431 NGTNKSSFVPVQVKG--LKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQ 488

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
             + P  V+ L   +V +V+ G   + AL K G I+ WG N HG  L+G    RS  +P 
Sbjct: 489 YYAVPVQVKGLK--DVVAVAAGSVHSLALKKDGTIWAWGSNYHG--LLGNDIERSF-VPV 543

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLR 419
           ++    D   V  +A G  H+ ++   G ++ +G+  F +L   + L   S P +++ L+
Sbjct: 544 QVKGLKD---VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLK 600

Query: 420 GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCV 478
              V ++A G  H+  +        K +   G ++ WGD   G+LG+   E+  L+P  V
Sbjct: 601 --DVVAIAAGEHHSLGL--------KKD---GTVWAWGDNFFGQLGNSPREKYSLVPVQV 647

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-EF 537
             L D   +  + G   ++ +   G V+  G    GQLGN  +     + V  ++K  + 
Sbjct: 648 KGLKDI--LAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKD 705

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
           V  IS+GSYH   L   G+V+ WG NA GQLG G +    T
Sbjct: 706 VLAISAGSYHSLALKKDGTVWGWGANARGQLGNGGAGVYST 746



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 29/344 (8%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVECLSGINVQSVSC 321
           DV  I+ G  H+  + K+G V+ WG  KDG+LG++   + S  P  V+ L   +V +++ 
Sbjct: 95  DVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLK--DVVAIAA 152

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           G+  +  L K G ++ WG N     + G  +  S  +P ++    D   V  +A G+ ++
Sbjct: 153 GDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFS--VPFQIKGLKD---VVAIAAGKDYS 207

Query: 382 AIVSTSG--QLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
             +   G   ++ Y    +  L  G  +    P +VE L+   V ++A G +H+ A+   
Sbjct: 208 LALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLAL--- 262

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                K +   G ++ WG+   G+LG+   E    P  V  L D   V  + G   ++ L
Sbjct: 263 -----KKD---GTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDV--VAIAAGENHSLAL 312

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
              G ++  G    GQLGN  ++   + V    LK+  V  I++G  H   L   G+V++
Sbjct: 313 KKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKD--VVAIAAGCEHSLALKKDGTVWS 370

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           WG N  GQLG G+S +   P  V  L+D  V ++  G++ + A+
Sbjct: 371 WGNNYYGQLGNGNSIDSYVPVQVRGLKD--VVAIATGNAHSLAL 412



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 31/293 (10%)

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           N+  ++ G + + AL   G ++ WG N+ G    G   S    +P K+    D   V  +
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQ--CGTEESSI--IPVKVKGLKD---VVAI 99

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVKSVACGPWHT 433
           A G +H+  +   G ++ +G    G LG+ +    S  P +V+ L+   V ++A G  ++
Sbjct: 100 AAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLK--DVVAIAAGDGYS 157

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASC 491
             +        K +   G ++ WG  +  ++  +DG  K   +P  +  L D   + A  
Sbjct: 158 LGL--------KKD---GTVWCWGLNESIQV--IDGSNKDFSVPFQIKGLKDVVAIAAGK 204

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAV 550
              L +   G   ++      + QL     +   + V VEG LK+  V  I++G YH   
Sbjct: 205 DYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEG-LKD--VVAIAAGRYHSLA 261

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           L   G+V+ WG N  GQLG G S++   P  V+ L+D  V ++  G + + A+
Sbjct: 262 LKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENHSLAL 312


>gi|20799909|ref|NP_620776.1| serine/threonine-protein kinase Nek8 [Danio rerio]
 gi|34098658|sp|Q90XC2.1|NEK8_DANRE RecName: Full=Serine/threonine-protein kinase Nek8; AltName:
           Full=Never in mitosis A-related kinase 8;
           Short=NimA-related protein kinase 8
 gi|15825379|gb|AAL09676.1|AF407580_1 NIMA-related kinase 8 [Danio rerio]
          Length = 697

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 43/338 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G            +S P  +  L+   +Q VS G  Q   +TKSG + TW   +
Sbjct: 322 VYTWGSG------------ISTPLRLPMLNTEVIQ-VSLGRTQKMGVTKSGRLITWEAPS 368

Query: 343 HGA---DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            G+    L G           +  +   GV +  V+CG+  T  ++  G + T+G G+ G
Sbjct: 369 VGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNG 428

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHGN  +V+QPK VE+L G ++  V+CG  H  A+ +   +R        ++F+WG  
Sbjct: 429 CLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTN---ER--------EVFSWGRG 477

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
           D GRLG    +    P  V+   DF+  +  CG   ++ ++   ++   G+    +LG  
Sbjct: 478 DNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLD 537

Query: 520 KA----KDRSITVVE----------GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           K     +  S   VE            L  E +  I  G+ H   +T  G  +T+G N +
Sbjct: 538 KVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQH 597

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQLG    +    P  V  L+   +    CG + T AI
Sbjct: 598 GQLGCSHRRSSRVPYQVSGLQG--ITMAACGDAFTLAI 633



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 16/295 (5%)

Query: 237 VDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           + G+V Q + Q    + + LE    + ++++S G      +T  G +  +G G +G LGH
Sbjct: 376 LPGAVEQMQPQ---FISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGH 432

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               DV+ PK+VE L G  +  VSCG     A+T   E+++WG  ++G   +G     SH
Sbjct: 433 GNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR--LGLATQDSH 490

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK--- 413
             P+++    D     +V CG   + I+ST  Q+   G+  F  LG   +    +P    
Sbjct: 491 NCPQQVSLPAD-FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFC 549

Query: 414 EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGER 471
           +VE +   ++  V   P +T  IV I +    S A+   G+ FT+G    G+LG      
Sbjct: 550 QVEEVHLFQL--VQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRS 607

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
             +P  V+ L       A+CG   T+ +   G+VYT G    G+LG  K +D  I
Sbjct: 608 SRVPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTWGKGARGRLGR-KEEDFGI 659



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 140/334 (41%), Gaps = 50/334 (14%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS-CPKLVECLSGINV 316
           +V  +SLG      VTK G +  W     G G+    G    M      + +E  SG+ +
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTI 400

Query: 317 QSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           +SVSCG+  T  LT  G I T+G  ++G   +G         P K+ + L G  + +V+C
Sbjct: 401 KSVSCGDLFTTCLTDRGIIMTFGSGSNGC--LGHGNFNDVTQP-KIVEALLGYELVQVSC 457

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLG------HGNLQNVSQPKEVESLRGLKVKSVACGP 430
           G  H   V+   ++F++G G  G LG      H   Q VS P + E+ R      V CG 
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQR------VLCG- 510

Query: 431 WHTAAIVD---IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC-VTRLVDFDF 486
                 VD   IM  + +  A G   F     DK     V G  +    C V  +  F  
Sbjct: 511 ------VDCSMIMSTQHQILACGNNRFNKLGLDK-----VSGTEEPSSFCQVEEVHLFQL 559

Query: 487 VQAS-----------CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE 535
           VQ++            G   +V +T  G+ +T GS  HGQLG    +   +      L+ 
Sbjct: 560 VQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG 619

Query: 536 EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
             +   + G      + + G VYTWGK A G+LG
Sbjct: 620 --ITMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 32/231 (13%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG 540
           +++ + +Q S GR   +G+T  G++ T  +   G  G P     ++  ++ +    F++G
Sbjct: 337 MLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPG-AVEQMQPQFISRFLEG 394

Query: 541 --------ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
                   +S G      LT  G + T+G  +NG LG G+  +   P  VEAL   ++  
Sbjct: 395 QSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQ 454

Query: 593 VVCGSSITAAICLHKSI-------------SVGDQSSC-SQCRMPFGFRRKKHNC-YNCG 637
           V CG+S   A+   + +             +  D  +C  Q  +P  F  ++  C  +C 
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCS 514

Query: 638 L-----HFCSACSTKKIINASLTPNKG--KPSRVCDTCYNHLQKITHSGRL 681
           +     H   AC   +     L    G  +PS  C     HL ++  S  L
Sbjct: 515 MIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPL 565


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 172/383 (44%), Gaps = 65/383 (16%)

Query: 268  SLGA--KHAALVTKEGEVFCWGEGKDGRLGHKVNMD-VSCPKLVECLSGINVQ--SVSCG 322
            SLGA   HAA + +  +++ WG    G LG   +M   + P  V     I V+   V+CG
Sbjct: 799  SLGAGWAHAAHI-RNHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACG 857

Query: 323  EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
               + ALT +G +Y+WG N++G    G R    + +   L D+L    +  V+ G++H+ 
Sbjct: 858  RNHSIALTTNG-VYSWGSNHYGQLGTGRRGQAPYPM---LVDSLSNELIVSVSAGQYHSL 913

Query: 383  IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
             +S SGQL+T+G G +G LGHG + +  +PK ++SL    + S   G  H+  +      
Sbjct: 914  AISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTS---- 969

Query: 443  RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                    GK+FT+G    G+LG+    +   P  V  L +             + L+ +
Sbjct: 970  -------NGKVFTFGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDV 1021

Query: 503  GKVYTMGSA-----VHGQLGNPKAKDRSI--------------------------TVVEG 531
            G++YT GS+      H Q    +A+++ +                          T+V+ 
Sbjct: 1022 GRLYTWGSSPQVLRFHAQ-SQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDT 1080

Query: 532  KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV-----EALR 586
                  +  +  G +H AV+++ G +YTWG N +GQLG+   +ER  PT         + 
Sbjct: 1081 SHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIV 1140

Query: 587  DRQ------VESVVCGSSITAAI 603
            D        ++ V CG+  T A+
Sbjct: 1141 DSSSTSGSLIKEVRCGADFTLAL 1163



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 57/351 (16%)

Query: 260  VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSV 319
            + ++V  ++ G  H+  +T  G V+ WG    G+LG         P LV+ LS   + SV
Sbjct: 847  IRVEVIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSV 905

Query: 320  SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
            S G++ + A++ SG+++TWG   +G   +G         P KL  +L+   +     G  
Sbjct: 906  SAGQYHSLAISASGQLWTWGWGVYGQ--LGHGAIDDCEKP-KLLKSLENENIISAYGGYS 962

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            H+ I++++G++FT+G G+FG LG+G+   ++ P  V  L    +K +    +H  A+ D+
Sbjct: 963  HSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDV 1021

Query: 440  MVDRCKSNAIGGKLFTWG-----------------------------DADKGRLGHVDGE 470
                       G+L+TWG                             DA+   L   DG 
Sbjct: 1022 -----------GRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGL 1070

Query: 471  RKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR----- 524
              L PT V T  +  D  Q  CG   +  ++  G++YT G  + GQLG    ++R     
Sbjct: 1071 LHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTV 1130

Query: 525  ------SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
                  S+ V         +K +  G+     L +   ++ WG N  GQLG
Sbjct: 1131 TLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAANKLWGWGSNHEGQLG 1181



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 139/297 (46%), Gaps = 26/297 (8%)

Query: 328  ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTS 387
            A  ++ ++YTWGH+++G   VG   +++       +     V V +VACG  H+  ++T+
Sbjct: 808  AHIRNHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTN 867

Query: 388  GQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            G ++++G   +G LG G       P  V+SL    + SV+ G +H+ AI           
Sbjct: 868  G-VYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAI----------- 915

Query: 448  AIGGKLFTWGDADKGRLGH--VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
            +  G+L+TWG    G+LGH  +D   K  P  +  L + + + A  G   ++ LT  GKV
Sbjct: 916  SASGQLWTWGWGVYGQLGHGAIDDCEK--PKLLKSLENENIISAYGGYSHSIILTSNGKV 973

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            +T GS   GQLGN      +  V    L E  +K I +  +H   L+  G +YTWG +  
Sbjct: 974  FTFGSGSFGQLGNGSTTKITSPVPVYGLPEP-IKCIYTAYFHNLALSDVGRLYTWGSSPQ 1032

Query: 566  GQLGLGDSQERETPTFV----EALRDRQVESVVCGSSITAAICLHKSISVGDQSSCS 618
                   SQ+R     V    +   D +++++     +     LH S ++ D S  S
Sbjct: 1033 VLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGL-----LHLSPTLVDTSHIS 1084



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 34/314 (10%)

Query: 250  ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
            A  P L++S     + ++S G  H+  ++  G+++ WG G  G+LGH    D   PKL++
Sbjct: 888  APYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLK 947

Query: 310  CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGV 369
             L   N+ S   G   +  LT +G+++T+G  + G   +G   +     P  ++   + +
Sbjct: 948  SLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQ--LGNGSTTKITSPVPVYGLPEPI 1005

Query: 370  RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQ------------NVSQPKEVES 417
            +   +    +H   +S  G+L+T+G     +  H   Q            + +   E+++
Sbjct: 1006 KC--IYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDA 1063

Query: 418  LRG----LKVKSVACGPWHTAAIVDIMVDRCKSNAI---GGKLFTWGDADKGRLGHVDGE 470
            L      L +        H +  +  M   C  +A+    G+L+TWG    G+LG     
Sbjct: 1064 LTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIR 1123

Query: 471  RKLLPTCV-----TRLVDFDFVQAS------CGRMLTVGLTGLGKVYTMGSAVHGQLGNP 519
             +L+PT       + +VD      S      CG   T+ L    K++  GS   GQLG  
Sbjct: 1124 ERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAANKLWGWGSNHEGQLGKI 1183

Query: 520  KAKDRSITVVEGKL 533
              +D + T+++GK+
Sbjct: 1184 PEEDLAKTLLDGKM 1197



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 15/247 (6%)

Query: 342  NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
            N  +D   E  S SH     + D+ + +         W  A    + +L+T+G  ++G L
Sbjct: 767  NQYSDNFVESVSYSHQPISNVSDSENEIEHKSSLGAGWAHAAHIRNHKLYTWGHSSYGCL 826

Query: 402  GHG-NLQNVSQPKEVESLRGLKVK--SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
            G G ++   + P  V     ++V+   VACG  H+ A+         +N +    ++WG 
Sbjct: 827  GVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALT--------TNGV----YSWGS 874

Query: 459  ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
               G+LG     +   P  V  L +   V  S G+  ++ ++  G+++T G  V+GQLG+
Sbjct: 875  NHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGH 934

Query: 519  PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
                D     +   L+ E +     G  H  +LTS G V+T+G  + GQLG G + +  +
Sbjct: 935  GAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITS 994

Query: 579  PTFVEAL 585
            P  V  L
Sbjct: 995  PVPVYGL 1001



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 64/287 (22%)

Query: 224  WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEV 283
            WG GV G    GA+D          D   PKLL+S    ++ +   G  H+ ++T  G+V
Sbjct: 924  WGWGVYGQLGHGAID----------DCEKPKLLKSLENENIISAYGGYSHSIILTSNGKV 973

Query: 284  FCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH 343
            F +G G  G+LG+     ++ P  V  L    ++ +    F   AL+  G +YTWG +  
Sbjct: 974  FTFGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQ 1032

Query: 344  GADLVGERRSRS---------------------------HWLPRKLFDT--LDGVRVSKV 374
                  + + R+                           H  P  L DT  + G  + ++
Sbjct: 1033 VLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSP-TLVDTSHISG-DIFQM 1090

Query: 375  ACGEWHTAIVSTSGQLFTYG---DGTFGVLGH-----GNLQNVSQPKEV---ESLRGLKV 423
             CG  H+A++ST+GQL+T+G   DG  GV G        +  V  P  +    S  G  +
Sbjct: 1091 CCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLI 1150

Query: 424  KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGE 470
            K V CG   T A+               KL+ WG   +G+LG +  E
Sbjct: 1151 KEVRCGADFTLAL-----------DAANKLWGWGSNHEGQLGKIPEE 1186


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 165/351 (47%), Gaps = 54/351 (15%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           IS G +H  LVT  G+++ +G    G+LG +    +S P  V+ L    V   +CG   T
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y+ G N+ G   +G+   R+ +     F      ++ +++ G   +A ++ 
Sbjct: 102 LVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQ--YKIKQLSAGSNMSAALTV 159

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G LG         P++V++  G  +  ++CG +H+A +          
Sbjct: 160 DGKLFMWGDNSEGQLGLEKGTIYCTPQKVDT--GKPIAWISCGYYHSAFVTQ-------- 209

Query: 447 NAIGGKLFTWGDADKGRLG--------HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG 498
               G+L+T+G+ + G+LG        H   +R L  +    +V       SCG   T+ 
Sbjct: 210 ---DGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGKVTMV-------SCGGEHTIA 259

Query: 499 LTGLGKVYTMGSAVHGQLGN---------PKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
           +T   +VYT G    GQLG+         PKA D         L ++ ++ ++ G  H A
Sbjct: 260 VT-EKEVYTFGLGQFGQLGHGTFIFETHIPKAVD--------ALTKKKIRYVTCGENHTA 310

Query: 550 VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR----QVESVVCG 596
           ++T  G +YT+G   +G+LGLG  +E  T  FV  L        V+SV CG
Sbjct: 311 IITEKGLLYTFGDGRHGKLGLG--EENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 122/232 (52%), Gaps = 19/232 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           ++ +S G+  +A +T +G++F WG+  +G+LG +       P+ V+  +G  +  +SCG 
Sbjct: 144 IKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKVD--TGKPIAWISCGY 201

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           + +  +T+ GE+YT+G   +G   +   + + H  P+++   L G +V+ V+CG  HT I
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLG-LSG-KVTMVSCGGEHT-I 258

Query: 384 VSTSGQLFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
             T  +++T+G G FG LGHG  +     PK V++L   K++ V CG  HTA I +    
Sbjct: 259 AVTEKEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITE---- 314

Query: 443 RCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVTRLVDFDFVQASCG 492
                   G L+T+GD   G+  LG  +   + +P   +  + F     +CG
Sbjct: 315 -------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 92/176 (52%), Gaps = 20/176 (11%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLG--------HKVNMDVSCPKLVECLSGINVQS 318
           IS G  H+A VT++GE++ +GE ++G+LG        HK       P+ V  LSG  V  
Sbjct: 197 ISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKK------PQRVLGLSG-KVTM 249

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           VSCG   T A+T+  E+YT+G    G    G     +H +P K  D L   ++  V CGE
Sbjct: 250 VSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETH-IP-KAVDALTKKKIRYVTCGE 306

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVSQPKEVESLRGLKVKSVACGPWH 432
            HTAI++  G L+T+GDG  G LG G  N  N   P    +     V+SVACG  H
Sbjct: 307 NHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCH 362



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 177/438 (40%), Gaps = 91/438 (20%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G +    ++           P K +  L   + ++++CG+ HT +V+ +G+L+
Sbjct: 13  SGALFTFGKSKFAENI-----------PSKFW--LKNDKPARISCGDEHTVLVTGNGKLY 59

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT------------------ 433
            +G   +G LG      +S+P  V++L+  KV   ACG  HT                  
Sbjct: 60  VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119

Query: 434 -------------------AAIVDIMVDRCKSN-----AIGGKLFTWGDADKGRLGHVDG 469
                               A   I      SN      + GKLF WGD  +G+LG   G
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKG 179

Query: 470 ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNP------KAKD 523
                P  V       ++  SCG   +  +T  G++YT G   +G+LG P        K 
Sbjct: 180 TIYCTPQKVDTGKPIAWI--SCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKP 237

Query: 524 RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQ-ERETPTFV 582
           + +  + GK     V  +S G  H   +T    VYT+G    GQLG G    E   P  V
Sbjct: 238 QRVLGLSGK-----VTMVSCGGEHTIAVTE-KEVYTFGLGQFGQLGHGTFIFETHIPKAV 291

Query: 583 EALRDRQVESVVCGSSITAAIC-----------LHKSISVGDQSSCSQ-----CRMPFGF 626
           +AL  +++  V CG + TA I             H  + +G+++  +Q     C     F
Sbjct: 292 DALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKF 351

Query: 627 RRKKHNCYNCGLHFCSACSTKK---IINASLTPNK-GKPSRVCDTCYNHLQKITHSGRLL 682
             +   C  C +   +    ++   IIN  L  N+   PS   D+  +   + +HS RL 
Sbjct: 352 TVQSVACGGCHMLVFATPRPQESEVIINDELKENRLVVPSLNGDSEMSTSLQRSHSARLR 411

Query: 683 KQENQ-SPRNLLNLQGSL 699
           ++E + SP     L  +L
Sbjct: 412 RREKETSPEQFRGLNRTL 429



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVE 309
           +PK +++     ++ ++ G  H A++T++G ++ +G+G+ G+  LG +   +   P L  
Sbjct: 287 IPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCS 346

Query: 310 CLSGINVQSVSCG 322
                 VQSV+CG
Sbjct: 347 NFLKFTVQSVACG 359


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 27/284 (9%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V +IS G   +A VTK G++F WG  + G+LG K     S P+LV+ L  + + SVSCG
Sbjct: 206 EVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCG 265

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD-TLDGVRVSKVACGEWHT 381
                A+T+ G++YTWG    G   +G    +S+  P+K+   +L+G++VS+V+CG   T
Sbjct: 266 RQHIGAVTEDGDLYTWGLGVFGQ--LGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFT 323

Query: 382 AIVSTSGQLFTYGDGTFGVLG------------HGNLQNVSQPKEVESLRGLKVKSVACG 429
            ++  +  L+ +G G +  LG              N    S PK VE+L   K+K V CG
Sbjct: 324 MVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCG 383

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A+ +             +++ WG    G LG      +L+P  VT +   +    
Sbjct: 384 HLHTLALTE-----------DNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISGEEISCI 432

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
           S G   ++ + G   + +      G +   K  D S TV E K+
Sbjct: 433 SAGEKHSLIVRG-SDLTSFAFDYKGLVNEKKYSDISFTVQEKKV 475



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 156/382 (40%), Gaps = 39/382 (10%)

Query: 249 DALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKL 307
           + L PK+LES     + + S G  H   V++ G+V+ WG GK+G+LG    M  S  P L
Sbjct: 21  EHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNL 80

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           ++ L    V  V+CG F + ALT  G +Y WG  +   D             +   +  +
Sbjct: 81  IKTLLHERVVKVACGNFHSLALTDQGRVYEWGQLHKIDD------------SKTGLEATN 128

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSV- 426
           G+          + +I+  S   +  G+        GN  +  +    E  +G  +  + 
Sbjct: 129 GLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKII 188

Query: 427 ---------ACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGERKLLP 475
                      G      ++DI      S A+   GK+FTWG  +KG+LG         P
Sbjct: 189 DYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSP 248

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--NPKAKDRSITVVEGKL 533
             V  L+D   V  SCGR     +T  G +YT G  V GQLG  N K+      V    L
Sbjct: 249 QLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSL 308

Query: 534 KEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER------------ETPTF 581
               V  +S GS    VL     +Y +G     QLG  +  +              +P  
Sbjct: 309 NGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKV 368

Query: 582 VEALRDRQVESVVCGSSITAAI 603
           VEAL D++++ V CG   T A+
Sbjct: 369 VEALEDKKIKYVTCGHLHTLAL 390



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 30/294 (10%)

Query: 288 EGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGAD 346
           + K   +G  ++ + + P  V+  L+   V  +S G   + A+TKSG+I+TWG N  G  
Sbjct: 178 QSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQL 237

Query: 347 LVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNL 406
            +  R   S     +L  TL  V++  V+CG  H   V+  G L+T+G G FG LGH N+
Sbjct: 238 GLKHRWFNS---SPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNV 294

Query: 407 QNVSQPKEVE--SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           ++   PK+V   SL G++V  V+CG   T  +          N I   L+ +G  +  +L
Sbjct: 295 KSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVL--------GRNQI---LYAFGHGEYAQL 343

Query: 465 G------HVD-GERK-----LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           G      H+D G R        P  V  L D      +CG + T+ LT   +VY  G   
Sbjct: 344 GATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGS 403

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
            G LG    + + +  +   +  E +  IS+G  H +++  G  + ++  +  G
Sbjct: 404 SGCLGLNSKRFQLVPQLVTSISGEEISCISAGEKH-SLIVRGSDLTSFAFDYKG 456



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 146/337 (43%), Gaps = 29/337 (8%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V   G  K+G+LG +   +   PK++E L G  + S S GE     +++ G++Y+WG   
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   V E+   S      L  TL   RV KVACG +H+  ++  G+++ +         
Sbjct: 63  EGQLGVPEKMLFS--TKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEW--------- 111

Query: 403 HGNLQNVSQPKE-VESLRGLKVKSVACGPWHTAAIVDI----------MVDRCKSNAIGG 451
            G L  +   K  +E+  GL        P + + I +           + D    N    
Sbjct: 112 -GQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDD 170

Query: 452 KLFTWGDADKGR-LGHVDGERKLLPTCVTRLV-DFDFVQASCGRMLTVGLTGLGKVYTMG 509
              +  +  KG+ +G +    +  P  V  L+ + + +  S G   +  +T  GK++T G
Sbjct: 171 DEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWG 230

Query: 510 SAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
               GQLG   +  + S  +V+  L  + V  +S G  H+  +T  G +YTWG    GQL
Sbjct: 231 FNEKGQLGLKHRWFNSSPQLVKTLLDVKIV-SVSCGRQHIGAVTEDGDLYTWGLGVFGQL 289

Query: 569 GLGDSQERETPTFVEA--LRDRQVESVVCGSSITAAI 603
           G  + +    P  V A  L   QV  V CGS+ T  +
Sbjct: 290 GHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVL 326



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 13/196 (6%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC-- 310
           P+L+++ + + + ++S G +H   VT++G+++ WG G  G+LGH        PK V    
Sbjct: 248 PQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFS 307

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADL----------VGERRSRSHWLPR 360
           L+GI V  VSCG   T  L ++  +Y +GH  + A L          +G R +   +   
Sbjct: 308 LNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEY-AQLGATEETQHLDMGSRDNHFKYSSP 366

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
           K+ + L+  ++  V CG  HT  ++   +++ +G G+ G LG  + +    P+ V S+ G
Sbjct: 367 KVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISG 426

Query: 421 LKVKSVACGPWHTAAI 436
            ++  ++ G  H+  +
Sbjct: 427 EEISCISAGEKHSLIV 442


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 44/346 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      +S P  ++ L    V+  +CG   T
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T +G +Y  G NN G   +G+   R  +     F   D ++  +++ G   +A ++ 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIK--QLSAGANTSAALTE 195

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N  NV  P EV    G  +  ++CG +H+A +          
Sbjct: 196 DGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV--GKPISWISCGYYHSAFVT--------- 244

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G+L+T+G+ + G+LG  +   +LL     P  V  + D   +Q +CG   TV LT 
Sbjct: 245 --TDGELYTFGEPENGKLGLPN---QLLINHRSPQRVLGIPD-KVIQVACGGGHTVVLTE 298

Query: 502 LGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              VY  G    GQLG          PK  DR        +K++ +  IS G  H A++T
Sbjct: 299 -KVVYAFGLGQFGQLGLGTFLFETSEPKIIDR--------IKDQKISHISCGENHTALMT 349

Query: 553 SGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
             G +YT+G   +G+LGLG  +   +  PT         V+ + CG
Sbjct: 350 DIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 51/276 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTAIV+ + +L+ +G   +G LG G+   +S+P  +++L+  KVK  ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 434 AAIVDI------------------MVDRCKSNAIG------------------------G 451
               D                     DR   + IG                        G
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDG 197

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           KLF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTTDGELYTFGEP 255

Query: 512 VHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG P       RS   V G + ++ ++ ++ G  H  VLT    VY +G    GQL
Sbjct: 256 ENGKLGLPNQLLINHRSPQRVLG-IPDKVIQ-VACGGGHTVVLTE-KVVYAFGLGQFGQL 312

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG    E   P  ++ ++D+++  + CG + TA +
Sbjct: 313 GLGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 18/280 (6%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G + Q K+Q     P L+      ++ +++ G   +  + + G +F WG   +G L  K 
Sbjct: 61  GQLGQQKSQCR---PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQ 117

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           +  +  PKL++ +   +V  V+CG     ALT+ G I +WG N  G   +G   S   +L
Sbjct: 118 D-SLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQ--LGLGSSEIEFL 174

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVES 417
              +  +L+   +S++  G +H+ ++S SG LFT+G   +G LGHGN  +  S P+ V++
Sbjct: 175 EPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKT 234

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           LR  +V  VA G  H+          C++    G +F+WG    G+LGH        P  
Sbjct: 235 LRHQEVVFVAMGEEHSV---------CRTR--NGGVFSWGHGGNGQLGHNSMANVTQPKK 283

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           +  L+     Q  CGR  T+ LT   K+   G   + QLG
Sbjct: 284 IMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 23/338 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCG 322
           V +I+ G +H   +T   +V+  G  + G+LG + +    C P LV       +  V+ G
Sbjct: 33  VISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKS---QCRPSLVTGFGAEEIFHVAAG 89

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +F + A+ +SG ++ WG + +G +L+ ++ S       KL D +    V +VACG  H  
Sbjct: 90  DFFSIAIAESGLLFGWGRSLNG-ELMCKQDSLHE---PKLLDKIMHWSVVQVACGAQHCI 145

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  G + ++G  T G LG G+ +    +P  + SL    +  +  G +H+  +     
Sbjct: 146 ALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVL----- 200

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                 +  G LFTWG  + G+LGH + +  +  P  V  L   + V  + G   +V  T
Sbjct: 201 ------SPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G V++ G   +GQLG+    + +      +L    V  I  G  H   LT    +  +
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGF 314

Query: 561 GKNANGQLGLGDSQERETPTF--VEALRDRQVESVVCG 596
           G N+N QLG  +      P    +    DRQ+  +  G
Sbjct: 315 GLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAG 352



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 145/325 (44%), Gaps = 24/325 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           ++ WG+   G+LG    NM +SCP  ++  +  +V S++ G   T  LT + ++Y+ G N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
             G   +G+++S+       L        +  VA G++ +  ++ SG LF +G    G L
Sbjct: 59  EFGQ--LGQQKSQCR---PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
                 ++ +PK ++ +    V  VACG  H  A+ +            G + +WG   +
Sbjct: 114 -MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTE-----------EGTILSWGSNTQ 161

Query: 462 GRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--N 518
           G+LG    E + L PT +  L  F   Q   G   +  L+  G ++T G    GQLG  N
Sbjct: 162 GQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGN 221

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             +   S  +V+  L+ + V  ++ G  H    T  G V++WG   NGQLG         
Sbjct: 222 SDSFQSSPRLVK-TLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQ 280

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  +  L    V  + CG   T ++
Sbjct: 281 PKKIMELMGTTVCQICCGRRHTISL 305



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +    ++++ L P ++ S     +  I  GA H+ +++  G +F WG+   G+
Sbjct: 157 GSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQ 216

Query: 294 LGHKVNMDV--SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           LGH  N D   S P+LV+ L    V  V+ GE  +   T++G +++WGH  +G   +G  
Sbjct: 217 LGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQ--LGHN 273

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
              +   P+K+ + + G  V ++ CG  HT  ++   +L  +G  +   LG  N
Sbjct: 274 SMANVTQPKKIMELM-GTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHN 326



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++    +V  +++G +H+   T+ G VF WG G +G+LGH    +V+ PK +  L 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELM 288

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL-DGVRV 371
           G  V  + CG   T +LT   ++  +G N++    +G     S  LP  +  +L D  ++
Sbjct: 289 GTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQ--LGTHNDTSARLPITIPISLTDDRQL 346

Query: 372 SKVACG 377
           S +A G
Sbjct: 347 SCIAAG 352


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 176/358 (49%), Gaps = 28/358 (7%)

Query: 253 PKLLESAVM-LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           P+ L++    +++   + G  H+ L+     V+  G+   G+LG + +     P+ ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           + ++V  VSCG+  + A+   G+++ WG  + G   +GE +  S ++P K+   L G+++
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKI-KALAGIKI 129

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGP 430
            +V+CG +H+  +S  G +F++G  + G LG G N ++ + P++V+SL G+ +  VA G 
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL---GHVDGERKLLPTCVTRLVDFDFV 487
            H+ A+           ++ G  F WG    G+L   G+   E+   P  +  L +   +
Sbjct: 190 THSFAL-----------SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSY 546
             SCG   T  LT  G+V+T G    GQL  +P++  R   ++EG      V  I   SY
Sbjct: 239 YISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASY 296

Query: 547 H-VAVLTSGGSVYTWGK------NANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           H +A + + G V + G+      N   Q    ++ +       E L D +V+ +  G+
Sbjct: 297 HTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGA 354



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 20/302 (6%)

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           +L    SGI +   + GE  +  L  +  +Y+ G N+ G   +G+RR +S   P  +   
Sbjct: 14  RLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQ--LGQRRDQSTERPEPI-QA 70

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS-QPKEVESLRGLKVK 424
           L+ + V  V+CG+ H+  V   G++F +G G+ G LG G  + +S  P ++++L G+K+ 
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 425 SVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVD 483
            V+CG +H+ A+ +            G +F+WG   +G+LG     R + +P  V  L  
Sbjct: 131 QVSCGHYHSLALSE-----------DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEG 179

Query: 484 FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQL---GNPKAKDRSITVVEGKLKEEFVKG 540
               Q + G   +  L+  G  +  GS   GQL   GN   +        G LK   V  
Sbjct: 180 IPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIY 239

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           IS G  H AVLT  G V+T+G N++GQL       +  P  +E +  R V  + C S  T
Sbjct: 240 ISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR-VSQIECASYHT 298

Query: 601 AA 602
            A
Sbjct: 299 IA 300



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 20/252 (7%)

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           PR+L     G+ + + A GE H+ ++ ++ ++++ GD ++G LG    Q+  +P+ +++L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERK---LLP 475
             L V  V+CG  H+ A+       C      GK+F WG   +G+LG   GE K    +P
Sbjct: 72  NDLHVDLVSCGKEHSVAV-------CHK----GKVFAWGAGSEGQLG--IGEFKEISFMP 118

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLK 534
           T +  L     +Q SCG   ++ L+  G V++ G    GQLG  K ++ ++I      L+
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLE 178

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE---TPTFVEALRDRQVE 591
              +  +++G  H   L+  G+ + WG N +GQL L  ++ +E    P  + AL++  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 592 SVVCGSSITAAI 603
            + CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 13/219 (5%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG G          +G +   + +  + +P  +++   + +  +S G  H+  ++++
Sbjct: 95  VFAWGAGS---------EGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 281 GEVFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G VF WG   +G+LG  K +   + P+ V+ L GI +  V+ G   + AL+ +G  + WG
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 205

Query: 340 HNNHGA-DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
            N  G   L G +     + P  +   L  + V  ++CG  HTA+++  GQ+FT+G  + 
Sbjct: 206 SNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSS 264

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
           G L          P+ +E + G +V  + C  +HT A V
Sbjct: 265 GQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 302



 Score = 46.6 bits (109), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG +H  +L S   VY+ G N+ GQLG    Q  E P  ++AL D  V+ V CG   + 
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 602 AICLHK 607
           A+C HK
Sbjct: 88  AVC-HK 92



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S NK +     P  + +   L V  IS G +H A++T+EG+VF +G    G+L     
Sbjct: 213 ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 272

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCA-LTKSGEIYTWG 339
                P+L+E + G  V  + C  + T A +  +G++ + G
Sbjct: 273 SGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312


>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
          Length = 538

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 28/282 (9%)

Query: 206 TYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQ 265
            YG+   E   ++KD  ++G   LG +I G +  S + +      L PK +E     D++
Sbjct: 28  VYGTLGNEALLVMKDKSVYG---LGNNIAGCLGISDAHS-----TLYPKKIEVLCDKDIK 79

Query: 266 NISLGA-KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS---GINVQ---S 318
             + G+  H   +T++GEV+ WG      LG+        P LV   +   G+N++    
Sbjct: 80  TFACGSGPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVD 139

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           V+CG   + ALT+ GE+Y WG NN G   VG   S +   PR++   L G ++  ++CG+
Sbjct: 140 VACGSHHSLALTEEGEVYAWGQNNCGQ--VGSNISTNQGSPRQVTSNLAGKKIVHISCGQ 197

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
             + +V+ +G+++ +G    G LG GN  N   P  V SL G+ +  VACG  HT A+ D
Sbjct: 198 TSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSD 257

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR 480
                       GKL+ WG    G+LG  +      P  VT 
Sbjct: 258 -----------EGKLYVWGGNSYGQLGIGNKTNACNPVLVTH 288



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 20/254 (7%)

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTSGQLFTYGD 395
            +G  N+ A  +G   + S   P+K+ + L    +   ACG   H   ++  G+++++G 
Sbjct: 45  VYGLGNNIAGCLGISDAHSTLYPKKI-EVLCDKDIKTFACGSGPHVLALTEKGEVYSWGH 103

Query: 396 GTFGVLGHGNLQNVSQP--KEVESL-RGLKVK---SVACGPWHTAAIVDIMVDRCKSNAI 449
            ++  LG+G       P    + +L  GL +K    VACG  H+ A+ +           
Sbjct: 104 NSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTE----------- 152

Query: 450 GGKLFTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
            G+++ WG  + G++G      +  P  VT  L     V  SCG+  ++ +T  G+VY  
Sbjct: 153 EGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVYGW 212

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           G    GQLG     ++      G L    +  ++ G  H   L+  G +Y WG N+ GQL
Sbjct: 213 GYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLALSDEGKLYVWGGNSYGQL 272

Query: 569 GLGDSQERETPTFV 582
           G+G+      P  V
Sbjct: 273 GIGNKTNACNPVLV 286



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 19/222 (8%)

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW-HTAAIVDIMVDRCKSNA 448
           ++  G+   G LG  +  +   PK++E L    +K+ ACG   H  A+ +          
Sbjct: 45  VYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSGPHVLALTE---------- 94

Query: 449 IGGKLFTWGDADKGRLGHVDGERKL------LPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
             G++++WG      LG+    + L      +PT    L     V  +CG   ++ LT  
Sbjct: 95  -KGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTEE 153

Query: 503 GKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           G+VY  G    GQ+G N      S   V   L  + +  IS G     V+T  G VY WG
Sbjct: 154 GEVYAWGQNNCGQVGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVYGWG 213

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            N  GQLG+G+   + TP+ V +L    +  V CG + T A+
Sbjct: 214 YNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVACGYAHTLAL 255


>gi|22202769|dbj|BAC07425.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|125557351|gb|EAZ02887.1| hypothetical protein OsI_25020 [Oryza sativa Indica Group]
 gi|125599227|gb|EAZ38803.1| hypothetical protein OsJ_23206 [Oryza sativa Japonica Group]
          Length = 1073

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 33/294 (11%)

Query: 282 EVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           EVF WG G + +LG         P  V+ L G  +++V+  +F + A++  GE+YTWG  
Sbjct: 153 EVFSWGSGTNYQLGTGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSSDGELYTWGFG 212

Query: 342 NHG---ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
             G      +   ++ +   PR++   L   RV+ VA  + HT I + +G+LFT+G    
Sbjct: 213 RGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELFTWGSNRE 272

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LG+ ++     P+ V SL+  ++ SVA    H+AA+ D            G++FTWG 
Sbjct: 273 GQLGYPSVDTQPTPRRVSSLKA-RIISVAAANKHSAAVADT-----------GEVFTWGS 320

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDF----DFVQASCGRMLTVGLTGLGKVYTMGSAVHG 514
             +G+LG+  G       C+ R+V++     F   S  +  TV L   G+V+T G     
Sbjct: 321 NKEGQLGY--GTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGTDGEVFTWGH---- 374

Query: 515 QLGNPKAKDRSITVVEG--------KLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
           +L  P+    S  + +G        +++   V  +++G  H  VLT+ G+++ W
Sbjct: 375 RLVTPRRAVISRCLKKGGNTNLKFHRMERLQVISVAAGVMHTTVLTADGAIFYW 428



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 142/315 (45%), Gaps = 49/315 (15%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK-----VNMDVSCPKLVEC-LSGINVQ 317
           ++ ++    H+  V+ +GE++ WG G+ GRLGH          V  P+ V   L    V 
Sbjct: 187 IKTVAASKFHSVAVSSDGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVN 246

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            V+  +  T   T++GE++TWG N  G   +G     +   PR++       R+  VA  
Sbjct: 247 VVAAAKHHTVIATEAGELFTWGSNREGQ--LGYPSVDTQPTPRRVSSL--KARIISVAAA 302

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ--PKEVESLRGLKVKSVACGPWHTAA 435
             H+A V+ +G++FT+G    G LG+G   + S   P+ VE L+G   K V+   +HT A
Sbjct: 303 NKHSAAVADTGEVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVA 362

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT----------RLVDFD 485
           +              G++FTWG     RL  V   R ++  C+           R+    
Sbjct: 363 L-----------GTDGEVFTWGH----RL--VTPRRAVISRCLKKGGNTNLKFHRMERLQ 405

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
            +  + G M T  LT  G ++   S+      +P  + R I  + G+     V  IS+G 
Sbjct: 406 VISVAAGVMHTTVLTADGAIFYWVSS------DPDLRCRQIFSMCGR----NVVNISAGK 455

Query: 546 YHVAVLTSGGSVYTW 560
           Y  A+ T+GG V+ W
Sbjct: 456 YWTALATAGGDVFMW 470



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 20/227 (8%)

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           S + ++F++G GT   LG GN      P +V++L G  +K+VA   +H+ A+        
Sbjct: 149 SVAMEVFSWGSGTNYQLGTGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAV-------- 200

Query: 445 KSNAIGGKLFTWGDADKGRLGHVD---GERK--LLPTCVTRLVDFDFVQ-ASCGRMLTVG 498
              +  G+L+TWG    GRLGH D   G+    + P  VT  +    V   +  +  TV 
Sbjct: 201 ---SSDGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVI 257

Query: 499 LTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
            T  G+++T GS   GQLG P    +        LK   +  +++ + H A +   G V+
Sbjct: 258 ATEAGELFTWGSNREGQLGYPSVDTQPTPRRVSSLKARIIS-VAAANKHSAAVADTGEVF 316

Query: 559 TWGKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCGSSITAAI 603
           TWG N  GQLG G S       P  VE L+ +  + V      T A+
Sbjct: 317 TWGSNKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVAL 363



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 23/236 (9%)

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           E+++WG   +    +G   +    LP K+ D L G  +  VA  ++H+  VS+ G+L+T+
Sbjct: 153 EVFSWGSGTNYQ--LGTGNAHIQKLPCKV-DALHGSYIKTVAASKFHSVAVSSDGELYTW 209

Query: 394 GDGTFGVLGHGNLQN-----VSQPKEVESLRGLK-VKSVACGPWHTAAIVDIMVDRCKSN 447
           G G  G LGH ++ +     V  P++V    G K V  VA    HT    +         
Sbjct: 210 GFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATE--------- 260

Query: 448 AIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYT 507
              G+LFTWG   +G+LG+   + +  P  V+ L     +  +     +  +   G+V+T
Sbjct: 261 --AGELFTWGSNREGQLGYPSVDTQPTPRRVSSL-KARIISVAAANKHSAAVADTGEVFT 317

Query: 508 MGSAVHGQLGNPKAKDRS--ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
            GS   GQLG   +   S  I  +   LK +  K +S+  YH   L + G V+TWG
Sbjct: 318 WGSNKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGTDGEVFTWG 373



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 40/234 (17%)

Query: 258 SAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           S++   + +++   KH+A V   GEVF WG  K+G+LG+  +   S   P++VE L G  
Sbjct: 290 SSLKARIISVAAANKHSAAVADTGEVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGKA 349

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK------LFDTLDGV 369
            + VS  ++ T AL   GE++TWGH      LV  RR+      +K       F  ++ +
Sbjct: 350 FKCVSAAKYHTVALGTDGEVFTWGHR-----LVTPRRAVISRCLKKGGNTNLKFHRMERL 404

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
           +V  VA G  HT +++  G +F +      V    +L+     +++ S+ G  V +++ G
Sbjct: 405 QVISVAAGVMHTTVLTADGAIFYW------VSSDPDLRC----RQIFSMCGRNVVNISAG 454

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR-----LGHVDGERKLLPTCV 478
            + TA               GG +F W DA K +        V G ++    CV
Sbjct: 455 KYWTALAT-----------AGGDVFMW-DAKKHKDDLPMFTRVHGVKRATSVCV 496



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 26/222 (11%)

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +++  ++F+WG     +LG  +   + LP  V  L        +  +  +V ++  G++Y
Sbjct: 148 DSVAMEVFSWGSGTNYQLGTGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSSDGELY 207

Query: 507 TMGSAVHGQLGNPKAKD---------RSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
           T G    G+LG+P             R +TV  G+ +   V  +++  +H  + T  G +
Sbjct: 208 TWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKR---VNVVAAAKHHTVIATEAGEL 264

Query: 558 YTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC-----------LH 606
           +TWG N  GQLG      + TP  V +L+ R + SV   +  +AA+              
Sbjct: 265 FTWGSNREGQLGYPSVDTQPTPRRVSSLKARII-SVAAANKHSAAVADTGEVFTWGSNKE 323

Query: 607 KSISVGDQSSCSQC--RMPFGFRRKKHNCYNCGLHFCSACST 646
             +  G  +S S C  RM    + K   C +   +   A  T
Sbjct: 324 GQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGT 365


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 152/325 (46%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +HA L+     V   GE   G+LG +       P+ V+ L  +    VSCG+  + A+
Sbjct: 31  GERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   VGE +   ++ PRK+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGVGELK-EINFTPRKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    +   P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L+  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  G  H +A + + G V ++G+
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGGDHTIAYVHTTGQVVSFGR 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
             +             PT  EAL++
Sbjct: 315 GPSAT---------SKPTHPEALKE 330



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 23/265 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L    +S G +H+  V  +G VF WG G +G+LG     +++  P+ +  
Sbjct: 65  LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQPSPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVS-QPKEVESLRGLKVKSVA 427
           +++VA G  H+  +S  G  F +G  + G L     N+Q  S +P  + +L+ L V  ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYIS 242

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HTA +           +  GK+FT+GD   G+LG+     K  P  V R +D    
Sbjct: 243 CGDEHTAVL-----------SQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGLVS 290

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAV 512
           Q  CG     G   +  V+T G  V
Sbjct: 291 QIDCG-----GDHTIAYVHTTGQVV 310



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +     P+ + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K       P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            +           L  + V  ++CG+ HTA++S  G++FT+GD + G LG+        P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG  HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGGDHTIAYV 303



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S    QV +  P  + +   L V  IS G +H A+++++G+VF +G+   G+LG+   
Sbjct: 214 ALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCALTK-SGEIYTWG 339
            +   P+LVE + G+ V  + CG   T A    +G++ ++G
Sbjct: 274 PEKRGPQLVERIDGL-VSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           EG    E ++  +SG  H  +L +   V++ G+N+ GQLG   +   + P  V+AL+  +
Sbjct: 18  EGSPGAELLQA-ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLK 76

Query: 590 VESVVCGSSITAAICLHK 607
            + V CG   + A+C HK
Sbjct: 77  FDLVSCGKEHSLAVC-HK 93


>gi|224118018|ref|XP_002331537.1| predicted protein [Populus trichocarpa]
 gi|222873761|gb|EEF10892.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 147/324 (45%), Gaps = 45/324 (13%)

Query: 250 ALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE 309
           A LP L  +  +  V++I+LG  H+A +T  G +F WG G  G LGH V      P+LVE
Sbjct: 18  AFLPTL--NPFLDSVRSIALGGVHSAAITSLGHIFTWGYGGFGALGHSVYHRELFPRLVE 75

Query: 310 CLSGINVQSVSCGEFQTCALTKSGEIYTWGHN--------------NHGADLVGERRSRS 355
                 ++ +S     T A+T+SGE+YTWG                N G  L        
Sbjct: 76  GSWDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPGRGPNEGGGLS------- 128

Query: 356 HWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
             +P K+  TL  V V+ V CG + T +++  GQ++ +G  +   LG G+     +PK +
Sbjct: 129 --IPCKV-KTLP-VPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKPI 184

Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
            SL   ++  +A G +H  A+ D            GK+ +WG    G+LGH   + + +P
Sbjct: 185 PSLEDARIIQIAGGGYHCLALTDE-----------GKVLSWGFGGHGQLGHSSIQSQKIP 233

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK--- 532
             +  L D   +  +CG   +  +T  GK+Y  G+A   QLG P   +     VE K   
Sbjct: 234 AVIDALADQHVIYIACGGSSSAAITDKGKLYMWGNAKDSQLGIPGLPEVQSCPVEVKFLM 293

Query: 533 ----LKEEFVKGISSGSYHVAVLT 552
               L +  V  +S G+ H   L 
Sbjct: 294 EDDGLGQHSVLSVSVGASHAMCLV 317



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 149/334 (44%), Gaps = 33/334 (9%)

Query: 286 WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA 345
           WG+G  GRLG         P L   L   +V+S++ G   + A+T  G I+TWG+   GA
Sbjct: 2   WGKGDGGRLGFGHENPAFLPTLNPFLD--SVRSIALGGVHSAAITSLGHIFTWGYGGFGA 59

Query: 346 DLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG--DGTFGVLGH 403
             +G         PR +  + DG ++  ++    HTA V+ SG+++T+G  +G   +   
Sbjct: 60  --LGHSVYHRELFPRLVEGSWDG-KIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLG 116

Query: 404 GNLQ-----NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
                     +S P +V++L  + V +V CG + T  + +            G+++ WG 
Sbjct: 117 PGRGPNEGGGLSIPCKVKTLP-VPVATVYCGGFFTMVLTEE-----------GQIWNWGA 164

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
                LG  D      P  +  L D   +Q + G    + LT  GKV + G   HGQLG+
Sbjct: 165 NSNYELGRGDKVGGWRPKPIPSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGH 224

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL-GDSQERE 577
              + + I  V   L ++ V  I+ G    A +T  G +Y WG   + QLG+ G  + + 
Sbjct: 225 SSIQSQKIPAVIDALADQHVIYIACGGSSSAAITDKGKLYMWGNAKDSQLGIPGLPEVQS 284

Query: 578 TPTFV------EALRDRQVESVVCGSSITAAICL 605
            P  V      + L    V SV  G+S   A+CL
Sbjct: 285 CPVEVKFLMEDDGLGQHSVLSVSVGAS--HAMCL 316



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 24/293 (8%)

Query: 338 WGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGT 397
           WG  + G   +G       +LP  L   LD VR   +A G  H+A +++ G +FT+G G 
Sbjct: 2   WGKGDGGR--LGFGHENPAFLP-TLNPFLDSVR--SIALGGVHSAAITSLGHIFTWGYGG 56

Query: 398 FGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWG 457
           FG LGH        P+ VE     K++ ++    HTAA+ +            G+++TWG
Sbjct: 57  FGALGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTE-----------SGEVYTWG 105

Query: 458 --DADKGRLGHV-----DGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
             + D            +G    +P C  + +        CG   T+ LT  G+++  G+
Sbjct: 106 REEGDGRLGLGPGRGPNEGGGLSIP-CKVKTLPVPVATVYCGGFFTMVLTEEGQIWNWGA 164

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
             + +LG               L++  +  I+ G YH   LT  G V +WG   +GQLG 
Sbjct: 165 NSNYELGRGDKVGGWRPKPIPSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGH 224

Query: 571 GDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
              Q ++ P  ++AL D+ V  + CG S +AAI     + +   +  SQ  +P
Sbjct: 225 SSIQSQKIPAVIDALADQHVIYIACGGSSSAAITDKGKLYMWGNAKDSQLGIP 277


>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
           siliculosus]
          Length = 983

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 162/376 (43%), Gaps = 51/376 (13%)

Query: 268 SLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTC 327
           + GA H+ L T EG++F WG  +DG + H     V     + C+       V CG   T 
Sbjct: 56  AAGANHSILRTSEGKLFRWGV-EDGDV-HPFPTGVCTQIPLPCI------EVCCGRKHTV 107

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSH-WLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
           AL K G + +WG    G    G+  S  H  L R+L     G RV +VACG +H+A+ + 
Sbjct: 108 ALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATD 167

Query: 387 SGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGL-----KVKSVACGPWHTAAIVDIM 440
           +G++FT+G   +G  G+G+  N V +P  V+  R       +V  V CG  H+A     +
Sbjct: 168 AGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSA-----L 222

Query: 441 VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL-LPTCVTRLVDFDFVQASCGRMLTVGL 499
           V R      GG L+TWG    G+LG  D E+ + +P  VT   D   VQA+ G    V L
Sbjct: 223 VTR------GGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVAL 276

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
           +   +V++ G    GQ G+       +      L+E  V  +  G +    +T  G  Y 
Sbjct: 277 SRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYA 336

Query: 560 WGKNANGQLGL-----------GDSQER-------------ETPTFVEALRDRQVESVVC 595
           WG    G  GL           G S +R               P  V +L   +V  V C
Sbjct: 337 WGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGC 396

Query: 596 GSSITAAICLHKSISV 611
           G   T  +   ++  V
Sbjct: 397 GGGHTLVVAKRRARPV 412



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 125/294 (42%), Gaps = 33/294 (11%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
           G  DG V    T V   +P        L    +  G KH   + K G V  WG G  G+L
Sbjct: 75  GVEDGDVHPFPTGVCTQIP--------LPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQL 126

Query: 295 GHKVNMDVSCPKLVECLS----GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
           GH  N     P+L+  L     G  V  V+CG + +   T +G ++TWG N +G    G 
Sbjct: 127 GHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNG- 185

Query: 351 RRSRSHWLPRKLFDTLDGV------RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG 404
             S+ + +P      L  V       V KV CG  H+A+V+  G L+T+G  +FG LG  
Sbjct: 186 --SKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQ 243

Query: 405 NLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR 463
           + +  V  P+EV       +   A G +H  A+               ++F+WG   +G+
Sbjct: 244 DAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKR-----------EVFSWGYGAEGQ 292

Query: 464 LGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            GH       +P  V+ L +    Q  CG   ++ +T  G  Y  GSA  G  G
Sbjct: 293 GGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTG 346



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 27/252 (10%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           VM WG G  G  +G   + S    +     LL +L    +   V  ++ G  H+A+ T  
Sbjct: 115 VMSWGTGYFG-QLGHGDNASYRHPR-----LLRRLDPQRLGERVVQVACGGYHSAVATDA 168

Query: 281 GEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGIN------VQSVSCGEFQTCALTKSG 333
           G VF WG  + G+ G+   +  V  P LV+ LS +       V  V CG   +  +T+ G
Sbjct: 169 GRVFTWGFNRYGQCGNGSKDNTVPEPSLVD-LSRVTPGAVGEVPKVLCGRHHSALVTRGG 227

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            +YTWG  + G  L  +   ++  +P+++    D   V + A G++H   +S   ++F++
Sbjct: 228 ALYTWGACSFG-KLGLQDAEKTVCIPQEVTFFSDKPLV-QAAAGDFHMVALSRKREVFSW 285

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G G  G  GHG+L ++  P+ V SL+ + V  V CGPW + AI            + G  
Sbjct: 286 GYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAIT-----------VDGYC 334

Query: 454 FTWGDADKGRLG 465
           + WG AD G  G
Sbjct: 335 YAWGSADGGWTG 346


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 176/421 (41%), Gaps = 77/421 (18%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS---GINVQSVSCGE 323
           IS GA H +++T +G ++ WG+G  G+LGH      S P+LVE       + V SV+ G 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGG 225

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR----------------------- 360
             T ALT  G +Y++G N+     +G   S  +  P+                       
Sbjct: 226 KHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSN 285

Query: 361 ---KLFDT--------LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV 409
               LF+         +D  R+ K++C    +A +S  G L+T+G G  G LGHG+    
Sbjct: 286 STSTLFNKQQQQSSNKID--RIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQ 343

Query: 410 SQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGH-VD 468
           S PK+V SL G  +  ++ G  H+ A+              G++F+WG  + G+LGH   
Sbjct: 344 STPKQVMSLHGHTIVDMSLGGGHSMALTK-----------RGEVFSWGRGENGQLGHGTF 392

Query: 469 GERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD----- 523
             +++ P  +    +      S G   ++ +   G ++  G   +G LG   + D     
Sbjct: 393 TSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDI 452

Query: 524 RSITVVEGKLK------------EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            S  +++                E F+  +SSG  H    T  G +Y+WG  +  +LGL 
Sbjct: 453 NSPVLIKSLNNSNGSNNSNSSAGERFI-NVSSGFQHNVAQTENGDLYSWGCGSGNRLGLA 511

Query: 572 DSQERETPTFVEALRDRQVES----VVCGSSITAAICLHKSISVGDQSSCSQCRMPFGFR 627
           + + +  P   + L DR   S      CG  IT  I   K I   D S+ +      G  
Sbjct: 512 NEENQLIP---KKLNDRSNNSKPAFFSCGEIIT-IIVEKKLIENSDTSTSTPINTSSGIT 567

Query: 628 R 628
           +
Sbjct: 568 K 568



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 52/274 (18%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLR---GLKVKSV 426
           +V  ++ G  HT+I++  G L+T+GDG  G LGHG L++ S+P+ VE       L+V SV
Sbjct: 162 KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSV 221

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR--LGHVDGERKLLPTCVT----- 479
           A G  HT A+            + G ++++G  D  +  LG++       P  VT     
Sbjct: 222 ANGGKHTVAL-----------TVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQ 270

Query: 480 -----------------------------RLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
                                          +D   ++ SC    +  ++ LG +YT G 
Sbjct: 271 SLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKID-RIIKLSCSTNRSAAISKLGYLYTWGR 329

Query: 511 AVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGL 570
             +G+LG+  +  +S       L    +  +S G  H   LT  G V++WG+  NGQLG 
Sbjct: 330 GDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGH 389

Query: 571 GD-SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G  + ++ TP  ++A +++ ++ +  G   + AI
Sbjct: 390 GTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAI 423



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR---Q 589
           LKE+ V  IS+G+ H +++T  G +YTWG    G+LG G  +    P  VE    +   +
Sbjct: 159 LKEKVV-FISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLR 217

Query: 590 VESVVCGSSITAAICLHKSI-SVGDQSSC 617
           V SV  G   T A+ +  ++ S G   SC
Sbjct: 218 VVSVANGGKHTVALTVCGNVYSFGGNDSC 246


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 152/325 (46%), Gaps = 32/325 (9%)

Query: 270 GAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL 329
           G +HA L+     V   GE   G+LG +       P+ V+ L  +    VSCG+  + A+
Sbjct: 31  GERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSLAV 90

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
              G ++ WG  + G   VGE +   ++ PRK+  TL+G+++ +V+CG +H+  +S   Q
Sbjct: 91  CHKGRVFAWGAGSEGQLGVGELK-EINFTPRKI-TTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 390 LFTYGDGTFGVLGHGN-LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           +F++G  + G LG G    +   P+ V SL G+ +  VA G  H+ A+           +
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFAL-----------S 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLL----PTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
           + G  F WG    G+L  + G    +    P  +  L +   +  SCG   T  L+  GK
Sbjct: 198 LCGTSFGWGSNSAGQLA-LSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGK 256

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYH-VAVLTSGGSVYTWGK 562
           V+T G    GQLG +P  + R   +VE    +  V  I  G  H +A + + G V ++G+
Sbjct: 257 VFTFGDNSSGQLGYSPTPEKRGPQLVER--IDGLVSQIDCGGDHTIAYVHTTGQVVSFGR 314

Query: 563 NANGQLGLGDSQERETPTFVEALRD 587
             +             PT  EAL++
Sbjct: 315 GPSAT---------SKPTHPEALKE 330



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 23/265 (8%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS-CPKLVEC 310
           LP+ +++   L    +S G +H+  V  +G VF WG G +G+LG     +++  P+ +  
Sbjct: 65  LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITT 124

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           L+GI +  VSCG + + AL+K  ++++WG N+HG   +G +   S   P+++  +L+G+ 
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLG-KEFPSQPSPQRV-RSLEGIP 182

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG--NLQNVS-QPKEVESLRGLKVKSVA 427
           +++VA G  H+  +S  G  F +G  + G L     N+Q  S +P  + +L+ L V  ++
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYIS 242

Query: 428 CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
           CG  HTA +           +  GK+FT+GD   G+LG+     K  P  V R +D    
Sbjct: 243 CGDEHTAVL-----------SQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDGLVS 290

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAV 512
           Q  CG     G   +  V+T G  V
Sbjct: 291 QIDCG-----GDHTIAYVHTTGQVV 310



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G   +G +   + +     P+ + +   + +  +S G  H+  ++K+ +VF WG+   G+
Sbjct: 100 GAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 294 LG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERR 352
           LG  K       P+ V  L GI +  V+ G   + AL+  G  + WG N+ G   +  R 
Sbjct: 160 LGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN 219

Query: 353 SRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
            +           L  + V  ++CG+ HTA++S  G++FT+GD + G LG+        P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 413 KEVESLRGLKVKSVACGPWHTAAIV 437
           + VE + GL V  + CG  HT A V
Sbjct: 280 QLVERIDGL-VSQIDCGGDHTIAYV 303



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 240 SVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN 299
           ++S    QV +  P  + +   L V  IS G +H A+++++G+VF +G+   G+LG+   
Sbjct: 214 ALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPT 273

Query: 300 MDVSCPKLVECLSGINVQSVSCGEFQTCALTK-SGEIYTWG 339
            +   P+LVE + G+ V  + CG   T A    +G++ ++G
Sbjct: 274 PEKRGPQLVERIDGL-VSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 530 EGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQ 589
           EG    E ++  +SG  H  +L +   V++ G+N+ GQLG   +   + P  V+AL+  +
Sbjct: 18  EGSPGAELLQA-ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLK 76

Query: 590 VESVVCGSSITAAICLHK 607
            + V CG   + A+C HK
Sbjct: 77  FDLVSCGKEHSLAVC-HK 93


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLT-E 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G   S+S          L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTCVKALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           impatiens]
          Length = 539

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 21/284 (7%)

Query: 195 PKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK 254
           PK  S+  +   YG    E   + KD M++G       IG    G +    TQ   + PK
Sbjct: 20  PKFISNVRMAIVYGKAANETLLVTKDDMVYG-------IGNNTYGCLGTGDTQ-STIYPK 71

Query: 255 LLESAVMLDVQNISLG-AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV-ECLS 312
            +E+     V+  + G   H   +T+EG+V+ WG      LG+K   +   P LV   L 
Sbjct: 72  KIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLD 131

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V  ++CG   + ALT  GEIY WGHN  G    G   S    +P+ L   L+G +V 
Sbjct: 132 DKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVV 191

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            ++CG+  +  V+ SG+++++G    G LG GN  +  +P++V +   + ++ V CG  H
Sbjct: 192 HISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMH 251

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           T A+ D            G L+ WG    G+LG        +PT
Sbjct: 252 TLALSD-----------EGVLYVWGANSYGQLGLNTDSNVWIPT 284



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 27/351 (7%)

Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           +N +    L PK + +  M  V   +  A    LVTK+  V+  G    G LG       
Sbjct: 10  KNWSIFSLLEPKFISNVRMAIVYGKA--ANETLLVTKDDMVYGIGNNTYGCLGTGDTQST 67

Query: 303 SCPKLVECLSGINVQSVSCGEF-QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
             PK +E L G +V++ + G+     ALT+ G++Y+WG+N++    +G + +     P  
Sbjct: 68  IYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE--LGNKSTNEGLTPTL 125

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP--KEVE-SL 418
           +   LD   V  +ACG  H+  ++  G+++ +G    G +G G + +  QP  K +   L
Sbjct: 126 VPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGL 185

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            G KV  ++CG   + A+ D            G++++WG    G+LG  +   ++ P  V
Sbjct: 186 NGKKVVHISCGDSSSVAVTD-----------SGEVYSWGHNGVGQLGLGNCTSQVEPQKV 234

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEF 537
                    +  CG M T+ L+  G +Y  G+  +GQLG N  +     T +E       
Sbjct: 235 ATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPEMGRI 294

Query: 538 VKGISSGSYHVAV-LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           +  ++S  +H+++ ++ G  ++ WG+       LG S +  T T ++ L D
Sbjct: 295 LDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQSIKVPTLTPLKCLYD 339



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 26/233 (11%)

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW-HTAAIVDI 439
           T +V+    ++  G+ T+G LG G+ Q+   PK++E+L G  VK+ A G   H  A+ + 
Sbjct: 39  TLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTE- 97

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRMLTVG 498
                      GK+++WG  D   LG+      L PT V  ++D  FV   +CG   ++ 
Sbjct: 98  ----------EGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLA 147

Query: 499 LTGLGKVYTMGSAVHGQLG--------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
           LT  G++Y  G  V GQ+G         P  K  ++      L  + V  IS G      
Sbjct: 148 LTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNV-----GLNGKKVVHISCGDSSSVA 202

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +T  G VY+WG N  GQLGLG+   +  P  V       +E VVCG   T A+
Sbjct: 203 VTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLAL 255


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 154/330 (46%), Gaps = 28/330 (8%)

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV---SCPKLVECL-- 311
           +++++ D  +ISLG  HA  +T +G V   G    G+LG          + P L + +  
Sbjct: 267 QASLINDAVSISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILP 326

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR- 370
           +GI   +V  G + + ALT  G +Y WG N+     VG+    +   P++    + G+  
Sbjct: 327 AGIKAVAVQAGRYHSLALTSEGTVYAWGRND-----VGQLGLGTITAPQESPALIPGLSD 381

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +A G+ HT  +   G ++ +GD   G LG G++   S P  V +L G  VK++A G 
Sbjct: 382 VIALAAGDDHTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPG--VKAIAAGG 439

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            H+ A+   + D        G + TWG  + G+LG+       +P  VT L D   V  +
Sbjct: 440 NHSVAL---LAD--------GTVRTWGYNNHGQLGNGSNTNSNVPVPVTGLTDV--VGIA 486

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGN-PKAKDRSITV-VEGKLKEEFVKGISSGSYHV 548
            G   T+ +   G V   G     QLGN     D++  V V+G      V+G+++G +H 
Sbjct: 487 AGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQTTPVDVQGIPTGRSVRGLTAGIFHA 546

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             L   GS+  WG N  GQLG G     +T
Sbjct: 547 LALLDDGSMVAWGSNVQGQLGDGTPNSSDT 576



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 160/344 (46%), Gaps = 29/344 (8%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSV 319
           +L    ++ G   +A +   G+V+ WG+   G+LG        S P     ++  +  S+
Sbjct: 220 VLRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLIN--DAVSI 277

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLD-GVRVSKVAC 376
           S GE+   ALT  G + T G +++G   D  G+  S +H  P    + L  G++   V  
Sbjct: 278 SLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGD-SSGTHTAPNLRDNILPAGIKAVAVQA 336

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL-RGLK-VKSVACGPWHTA 434
           G +H+  +++ G ++ +G    G LG   L  ++ P+E  +L  GL  V ++A G  HT 
Sbjct: 337 GRYHSLALTSEGTVYAWGRNDVGQLG---LGTITAPQESPALIPGLSDVIALAAGDDHTL 393

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           A+        K++   G ++ WGD   G LG  D     +PT V+ L     + A  G  
Sbjct: 394 AL--------KAD---GSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVKAIAA--GGN 440

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +V L   G V T G   HGQLGN    + ++ V    L +  V GI++G      + S 
Sbjct: 441 HSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVPVTGLTD--VVGIAAGYEFTLAVLSN 498

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEAL-RDRQVESVVCG 596
           GSV  WG + + QLG G +  ++ TP  V+ +   R V  +  G
Sbjct: 499 GSVKAWGHDDSFQLGNGATTGDQTTPVDVQGIPTGRSVRGLTAG 542



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 34/319 (10%)

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           N+  + P  +  L      +++ G + + A+  +G++++WG N +G  L     S S   
Sbjct: 209 NLTRTAPLTLRVL---RANTLAAGGYFSAAIKPNGQVWSWGDNTYG-QLGRATTSPSDST 264

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           P +     D V +S    GE+H   ++  G++ T G   +G LG G   + S      +L
Sbjct: 265 PTQASLINDAVSIS---LGEYHAIALTNDGRVVTLGRDDYGQLGDGP-GDSSGTHTAPNL 320

Query: 419 R------GLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVDGE 470
           R      G+K  +V  G +H+ A+              G ++ WG  D G+LG   +   
Sbjct: 321 RDNILPAGIKAVAVQAGRYHSLALTSE-----------GTVYAWGRNDVGQLGLGTITAP 369

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVE 530
           ++  P  +  L D   +  + G   T+ L   G V+  G   +G+LG       S+    
Sbjct: 370 QES-PALIPGLSDV--IALAAGDDHTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAV 426

Query: 531 GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQV 590
             L    VK I++G  H   L + G+V TWG N +GQLG G +     P  V  L D  V
Sbjct: 427 SNLPG--VKAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSNTNSNVPVPVTGLTD--V 482

Query: 591 ESVVCGSSITAAICLHKSI 609
             +  G   T A+  + S+
Sbjct: 483 VGIAAGYEFTLAVLSNGSV 501


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 154/342 (45%), Gaps = 28/342 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           + +++ G  HA  + K+G V+ WG    G+LG     D + P  +  + G   ++V+  +
Sbjct: 269 ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGG--ARAVASLD 326

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL + G++  WG NN G    G+   RS      L   L    V+ V  G  H   
Sbjct: 327 AGSLALLEGGDVLAWGANNSGQLGDGDTADRS---TPSLVPELS--AVTAVVGGAQHALA 381

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT-AAIVDIMVD 442
           +   G L+ +G G  G LGHG  +    P  V  L    V S+A G +H+ AA+ D    
Sbjct: 382 LRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLT--NVTSMATGSFHSLAALED---- 435

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   G ++ WG    G+LG      + +P  V  L     V A+    + V + G 
Sbjct: 436 --------GSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDG- 486

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
             V+T G    GQLG+   +DR+  V    L    V  I++G  HV  L S G V+ WG 
Sbjct: 487 -TVWTWGRNAAGQLGDGTTRDRARPVAVSGLTS--VLAIAAGGSHVLALRSDGDVWAWGY 543

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           NA GQLG G S ++ TP  V  L    ++SV  G+  + A+ 
Sbjct: 544 NALGQLGDGTSGDKLTPVRVPGL--APIQSVAAGTYFSMALA 583



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 27/320 (8%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN-MDVSCPKLVECLSGINVQSVSCG 322
            ++ +S GA HA  + ++G V+ WG+   G+LG   +   V  P+ V  LS  +V+SV+ G
Sbjct: 1019 LRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS--DVESVAAG 1076

Query: 323  EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV-SKVACGEW-- 379
            E  + A+   G  ++WG N +G   +G+ ++     P ++   + G +  + V  G W  
Sbjct: 1077 EQFSVAVAHDGTAFSWGSNEYGQ--LGDGKTGPRLSPAEV--KIGGSKARTVVTVGAWGQ 1132

Query: 380  HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            H   +   G L  +GD   G LG G     S P E+  +   +V +V+ G WH+ A+   
Sbjct: 1133 HAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVT--RVTAVSTGAWHSLAL--- 1187

Query: 440  MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                     + G ++ WG    G+LG      + +P  V  L   D V  + G   +V +
Sbjct: 1188 --------RLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGL--RDVVAIAAGGYHSVAV 1237

Query: 500  TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
               G V+T G    GQLG+  ++ R++ V   KL  E V+ ++ G +H   L + G+V  
Sbjct: 1238 RSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKL--EGVQAVTGGDHHSLALHADGTVSG 1295

Query: 560  WGKNANGQLGLGDSQERETP 579
            WG NA+GQLG G   +R TP
Sbjct: 1296 WGHNASGQLGDGSRTDRYTP 1315



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 168/383 (43%), Gaps = 27/383 (7%)

Query: 253  PKLLESAV--MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            P LL + V  +  V +++ G   +  V  +G  + WG  + G+LG   N     P  V  
Sbjct: 956  PSLLPARVKGLEGVGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVAS 1015

Query: 311  LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            + G+  ++VS G     AL + G ++ WG N  G    G       W P+++ +  D   
Sbjct: 1016 VKGL--RAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMW-PQRVAELSD--- 1069

Query: 371  VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA-CG 429
            V  VA GE  +  V+  G  F++G   +G LG G       P EV+ + G K ++V   G
Sbjct: 1070 VESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVK-IGGSKARTVVTVG 1128

Query: 430  PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             W   A+  +M D        G L  WGD   G+LG     R+  P  +  +     V  
Sbjct: 1129 AWGQHAVA-LMAD--------GTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVST 1179

Query: 490  SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVA 549
                 L + L G   V+  G+   GQLG+     R++ V    L++  V  I++G YH  
Sbjct: 1180 GAWHSLALRLDG--TVWAWGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSV 1235

Query: 550  VLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             + S G+V+TWG N  GQLG G S+ R  P  V  L    V++V  G   +  + LH   
Sbjct: 1236 AVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEG--VQAVTGGDHHS--LALHADG 1291

Query: 610  SVGDQSSCSQCRMPFGFRRKKHN 632
            +V      +  ++  G R  ++ 
Sbjct: 1292 TVSGWGHNASGQLGDGSRTDRYT 1314



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 154/339 (45%), Gaps = 31/339 (9%)

Query: 262 LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI--NVQSV 319
           L    I+ GA+H+  +T  G V+ WG    G+LG     D S  +L      +  ++ SV
Sbjct: 66  LSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLG---GADTSFQRLSPARLPVLEDIVSV 122

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW 379
             G+  + AL   G ++TWG N+ G    G    R+   P+++    D   V  VA G++
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAE--PQRVEGFTD---VVAVAAGDF 177

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
           H+ ++ + G ++ +G    G LG G+ Q    PK V  L G  V ++A G          
Sbjct: 178 HSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAG---------- 225

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
             D   +    G + +WG    G+LG     ++L P  +  L     V A  G    V L
Sbjct: 226 -FDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAA--GTYHAVAL 282

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
              G V+T GS   GQLG+    DR++   + G      V  + +GS     L  GG V 
Sbjct: 283 GKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSL---ALLEGGDVL 339

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
            WG N +GQLG GD+ +R TP+ V  L    V +VV G+
Sbjct: 340 AWGANNSGQLGDGDTADRSTPSLVPEL--SAVTAVVGGA 376



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 154/328 (46%), Gaps = 28/328 (8%)

Query: 267  ISLGA--KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF 324
            +++GA  +HA  +  +G +  WG+   G+LG       S P  +  ++   V +VS G +
Sbjct: 1125 VTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVT--RVTAVSTGAW 1182

Query: 325  QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHTAI 383
             + AL   G ++ WG N  G    G   +R+  +P      + G+R V  +A G +H+  
Sbjct: 1183 HSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVP------VQGLRDVVAIAAGGYHSVA 1236

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            V + G ++T+G  TFG LG G  ++ + P +V  L G  V++V  G  H+ A+     D 
Sbjct: 1237 VRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEG--VQAVTGGDHHSLAL---HAD- 1290

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGL 502
                   G +  WG    G+LG  DG R    T V RL D D   +   G   TV L   
Sbjct: 1291 -------GTVSGWGHNASGQLG--DGSRTDRYTPV-RLKDVDGLTEVRAGAAHTVALGKD 1340

Query: 503  GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            G V+T G   HGQLG+     R   V +          I +G++H          +TWG+
Sbjct: 1341 GTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGR 1400

Query: 563  NANGQLGLGDSQERETPTFVEALRDRQV 590
            N++GQLG+GD+  R  P  ++ L   +V
Sbjct: 1401 NSHGQLGVGDNAPRAEPQRMKLLSGLKV 1428



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 158/366 (43%), Gaps = 31/366 (8%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G + Q  TQ   L PK +    +  V  ++ G      V  +G V  WG    G+LG   
Sbjct: 197 GQLGQGHTQT-GLWPKPVPG--LEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGT 253

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
                 P+ +  LSGI   SV+ G +   AL K G ++TWG N+ G      +     W 
Sbjct: 254 FTQRLSPERIPTLSGIT--SVAAGTYHAVALGKDGTVWTWGSNSSG------QLGDGTWN 305

Query: 359 PRKLFDTLDGVRVSK-VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
            R +   L GV  ++ VA  +  +  +   G +  +G    G LG G+  + S P  V  
Sbjct: 306 DRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPE 365

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L    V +V  G  H  A+      R       G L+ WG    G+LGH   ER ++P  
Sbjct: 366 LS--AVTAVVGGAQHALAL------RKD-----GTLWAWGGGLAGQLGHGGSERHVVPAT 412

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           V  L +      + G   ++     G V+  G   +GQLG+    +R + V    L    
Sbjct: 413 VMGLTNV--TSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS-- 468

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           V+ +++  +H   +   G+V+TWG+NA GQLG G +++R  P  V  L    V ++  G 
Sbjct: 469 VRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGL--TSVLAIAAGG 526

Query: 598 SITAAI 603
           S   A+
Sbjct: 527 SHVLAL 532



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 175/426 (41%), Gaps = 56/426 (13%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           GG   G +    T    L P  L   V+ D+ ++  G  H+  +  +G V+ WG    G+
Sbjct: 91  GGNSAGQLGGADTSFQRLSPARLP--VLEDIVSVVSGDAHSLALGADGTVWTWGSNSSGQ 148

Query: 294 LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
           LG     D + P+ VE  +  +V +V+ G+F +  L   G ++ WG N HG   +G+  +
Sbjct: 149 LGDGTTTDRAEPQRVEGFT--DVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQ--LGQGHT 204

Query: 354 RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
           ++   P+ +   L+G  V  +A G   T  V   G + ++G  +FG LG G       P+
Sbjct: 205 QTGLWPKPV-PGLEG--VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPE 261

Query: 414 EVESLRGLKVKSVACGPWHTAAIV-DIMVDRCKSNAI----------------------- 449
            + +L G  + SVA G +H  A+  D  V    SN+                        
Sbjct: 262 RIPTLSG--ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGA 319

Query: 450 ---------------GGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
                          GG +  WG  + G+LG  D   +  P+ V  L     V       
Sbjct: 320 RAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPELSAVTAVVGGAQHA 379

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           L   L   G ++  G  + GQLG+  ++   +      L    V  +++GS+H       
Sbjct: 380 LA--LRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTN--VTSMATGSFHSLAALED 435

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQ 614
           GSV+ WG+N+ GQLG G   ER  P  V  L    V +V      + A+ +  ++    +
Sbjct: 436 GSVWAWGRNSYGQLGDGTVTERHVPVRVPGL--PSVRAVAAAGHHSIAVAMDGTVWTWGR 493

Query: 615 SSCSQC 620
           ++  Q 
Sbjct: 494 NAAGQL 499



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 36/367 (9%)

Query: 239 GSVSQNKTQVDALLPKL--LESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH 296
           G  + N   V A LP +    +   LD  +++L         + G+V  WG    G+LG 
Sbjct: 300 GDGTWNDRAVPAPLPGVGGARAVASLDAGSLAL--------LEGGDVLAWGANNSGQLGD 351

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               D S P LV  LS   V +V  G     AL K G ++ WG    G   +G   S  H
Sbjct: 352 GDTADRSTPSLVPELS--AVTAVVGGAQHALALRKDGTLWAWGGGLAGQ--LGHGGSERH 407

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P  +    +   V+ +A G +H+      G ++ +G  ++G LG G +     P  V 
Sbjct: 408 VVPATVMGLTN---VTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVP 464

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L    V++VA    H+ A+           A+ G ++TWG    G+LG      +  P 
Sbjct: 465 GLP--SVRAVAAAGHHSIAV-----------AMDGTVWTWGRNAAGQLGDGTTRDRARPV 511

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE 536
            V+ L     + A    +L   L   G V+  G    GQLG+  + D+   V    L   
Sbjct: 512 AVSGLTSVLAIAAGGSHVLA--LRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAP- 568

Query: 537 FVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCG 596
            ++ +++G+Y    L + G+V+TWG+   GQLG G   +R +P  V+ L D  + ++  G
Sbjct: 569 -IQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSD--IRNISVG 625

Query: 597 SSITAAI 603
           S+   A+
Sbjct: 626 SAHALAV 632



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 169/379 (44%), Gaps = 54/379 (14%)

Query: 221 VMIWGEGVLG--GDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           V  WGEG  G  GD GG            V  L P  ++   + D++NIS+G+ HA  V 
Sbjct: 588 VWTWGEGFEGQLGDGGG------------VQRLSPVAVKG--LSDIRNISVGSAHALAVR 633

Query: 279 KEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTW 338
            +G V+ WG+  +G+LG    MD   P  V  L+GI   +VS G   + AL   G +  W
Sbjct: 634 GDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLTGIT--AVSGGRSHSLALHADGTVRAW 691

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G N +G   +G+    S  LP  +   L G++   +  G  H   +     L  +G   F
Sbjct: 692 GSNGYGQ--LGDGTLTSRVLP-SVIPGLSGIQ--ALHPGHLHVLALHADKTLRGWGYNRF 746

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LG G     ++P +V  +   +V+ +A G  H       ++ R       G +  WG 
Sbjct: 747 GQLGLGAAGWSARPVQVRGIG--RVERLAAGRAHA------LLVRAD-----GSVVAWGA 793

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVG------LTGLGKVYTMGSAV 512
              G+LG  DG      T   R V    V  SC R +  G      L   G V+T G   
Sbjct: 794 NASGQLG--DGGT----THGARAVTVRGV--SCARSVASGGQHSLVLACDGTVWTWGENQ 845

Query: 513 HGQLGNPKAKDRSITVVEGKLKE-EFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            GQLG+     R   V  G+++  E +  ++ G      L S G+V+ WG NA+GQ+G G
Sbjct: 846 RGQLGDGTTSAR---VAPGRVEGLEGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDG 902

Query: 572 DSQERETPTFVEALRDRQV 590
             ++R TP  +EAL D  V
Sbjct: 903 TVEDRLTPRRIEALSDVMV 921



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 33/297 (11%)

Query: 306 KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDT 365
           +L E LS + +   + G   +  LT +G ++ WG N+ G  L G   S     P +L   
Sbjct: 61  RLAEPLSPMRI---AAGAQHSLFLTPTGAVWAWGGNSAG-QLGGADTSFQRLSPARLPVL 116

Query: 366 LDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
            D   +  V  G+ H+  +   G ++T+G  + G LG G   + ++P+ VE      V +
Sbjct: 117 ED---IVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFT--DVVA 171

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           VA G +H+  +        KS+   G ++ WG    G+LG    +  L P  V  L    
Sbjct: 172 VAAGDFHSLVL--------KSD---GTVWAWGTNFHGQLGQGHTQTGLWPKPVPGL--EG 218

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDR----SITVVEGKLKEEFVKGI 541
            V  + G   T+ +   G V + G+   GQLG      R     I  + G      +  +
Sbjct: 219 VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSG------ITSV 272

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD-RQVESVVCGS 597
           ++G+YH   L   G+V+TWG N++GQLG G   +R  P  +  +   R V S+  GS
Sbjct: 273 AAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGS 329


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 207 ---TDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLT-E 260

Query: 503 GKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
             VYT G    GQLG          PK       V+E  ++++ +  IS G  H A++T 
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPK-------VIE-NIRDQTISYISCGENHTALITD 312

Query: 554 GGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
            G +YT+G   +G+LGLG  +      PT         V+ V CG
Sbjct: 313 IGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G   S+S          L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG---SKSAISKPTCVKALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 121/251 (48%), Gaps = 30/251 (11%)

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           S  CGEF    L  +  ++T                    LPR L  + + + V +VACG
Sbjct: 3   SWGCGEFGQLGLKDAAGVFT------------------SPLPRFLRGSRELLFV-RVACG 43

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             HT  ++ SG ++++G GTFG LGHG  ++ S P  V+SL GL +  +ACG  H+ A+ 
Sbjct: 44  SSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT 103

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                      + G+LF+WG    G+LG    E  L P  VT L D    Q  CG   T+
Sbjct: 104 -----------VEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTM 152

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSV 557
            +   G++++ G    GQ G+    +  +  +   L+ + +   S+G+ H   LTSGG V
Sbjct: 153 AIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGV 212

Query: 558 YTWGKNANGQL 568
           Y WG N  GQ+
Sbjct: 213 YAWGDNEQGQV 223



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 16/214 (7%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP+ L  +  L    ++ G+ H   +T  G+V+ +G+G  G LGH      S P +V+ L
Sbjct: 25  LPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSL 84

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP-RKLFDTLDGVR 370
            G+ +  ++CG+  +CALT  G++++WG   +G    G   +    +P   L D L    
Sbjct: 85  WGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRL---- 140

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +++V CG  +T  + + GQLF++G G +G  GHG   N+  PK V SL    +   + G 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGA 200

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
            H  A+             GG ++ WGD ++G++
Sbjct: 201 RHAVALTS-----------GGGVYAWGDNEQGQV 223



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 3/154 (1%)

Query: 453 LFTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           L +WG  + G+LG  D        LP  +    +  FV+ +CG   T+ LTG G VY+ G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               G LG+   +  S  V+   L    +  I+ G  H   LT  G +++WG+   GQLG
Sbjct: 61  QGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLG 120

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G  +    P  V AL DR +  VVCG+  T AI
Sbjct: 121 CGSVENHLQPVPVTALSDRLLTQVVCGADYTMAI 154



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 14/217 (6%)

Query: 390 LFTYGDGTFGVLGHGNLQNVSQ---PKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           L ++G G FG LG  +   V     P+ +   R L    VACG  HT A+          
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTG-------- 52

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G ++++G    G LGH   E    P  V  L     VQ +CG   +  LT  G+++
Sbjct: 53  ---SGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLF 109

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           + G   +GQLG    ++    V    L +  +  +  G+ +   + S G +++WG    G
Sbjct: 110 SWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWG 169

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           Q G G       P  V +L +  +     G+    A+
Sbjct: 170 QTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVAL 206



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 91/236 (38%), Gaps = 35/236 (14%)

Query: 116 LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSP 175
            L  + EL  VR  CGS S +L+     D  S+   +F +    +++        + SSP
Sbjct: 28  FLRGSRELLFVRVACGS-SHTLALTGSGDVYSFGQGTFGALGHGTTE--------SCSSP 78

Query: 176 HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            +       W L      C  N S  L              +   +  WG G  G    G
Sbjct: 79  VIVDS---LWGLGIVQIACGDNHSCALT-------------VEGQLFSWGRGKYGQLGCG 122

Query: 236 AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
           +V+  +      V AL  +LL   V         GA +   +  +G++F WG G  G+ G
Sbjct: 123 SVENHL--QPVPVTALSDRLLTQVVC--------GADYTMAIDSDGQLFSWGHGHWGQTG 172

Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           H    ++  PKLV  L   N+   S G     ALT  G +Y WG N  G  L G R
Sbjct: 173 HGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVLPGGR 228


>gi|428671737|gb|EKX72652.1| Regulator of chromosome condensation RCC1 domain containing protein
           [Babesia equi]
          Length = 1655

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 178/423 (42%), Gaps = 68/423 (16%)

Query: 199 SHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLES 258
           +H L+T + GS           +  WG G  G    G ++ + + +K   ++     + +
Sbjct: 176 NHTLITTSNGS-----------LYSWGIGAFGVLGTGNINNNFTPSKVVFNSNAEVFITT 224

Query: 259 AVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQS 318
            V         G++H+  + ++G V+ WG G +GRLG         P +++   G  +  
Sbjct: 225 CVA--------GSRHSVALDRDGRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYEISF 276

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  T  + + G +YTWG    G   +G  +  S  L   + ++L G  +++V+CG 
Sbjct: 277 ISCGDSHTACIDRFGSVYTWGSAKSGQ--LGLGKILSDVLEPTIVESLSGTPITQVSCGT 334

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNL-QNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +T  +S+SG ++ +G        H  L  NVS   ++    G K   +  GP+  A + 
Sbjct: 335 GYTLALSSSGSIYQWGYSIGLSQTHDGLSSNVSYIPQIIKELGSKNVYITSGPYSCAVV- 393

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL---VDFDFV------- 487
                    NA  G L TWG     RLGH +      P  V  L   V+ D +       
Sbjct: 394 ---------NAF-GDLLTWGIGQNFRLGHGNTNDYAKPKFVPELRNGVNIDMISEESAKL 443

Query: 488 --------------------QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT 527
                               Q S G    V +T  G VYT G  V+   G   +KD    
Sbjct: 444 EEEAEESTKKRNLYDERRIQQISVGDAHGVFVTCNGTVYTWG--VNNGTGYNTSKDPLEN 501

Query: 528 VVEGKLKEEF---VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEA 584
             E  L   F   +K I+ GS H   +T  G +++WG N NGQLGLGD + R  P  V +
Sbjct: 502 YTEPCLLNSFSSKIKRIACGSNHTLAVTVNGLLFSWGCNDNGQLGLGDLRSRVFPEHVTS 561

Query: 585 LRD 587
           + +
Sbjct: 562 IEN 564



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 182/399 (45%), Gaps = 53/399 (13%)

Query: 219 KDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVT 278
           K+V+ WG+ +    +G  V+ + S++   V     K        +V  +S G  H+A++ 
Sbjct: 54  KNVLSWGK-ISFNCLGQGVNVATSESPGVVPFFTGK--------NVVQVSCGDYHSAVLV 104

Query: 279 --------KEGEVFCWGEGKDGRLGHKVNMD----------------VSCPKLVECLSGI 314
                     G VF +G G +GRLG+ ++ D                   P+ V    G+
Sbjct: 105 VPNNRDHKSPGTVFTFGLGNNGRLGYYIDDDSERRKEKSDTDEPSWCTPVPQPVGLSIGL 164

Query: 315 N--VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK-LFDTLDGVRV 371
              V SVSCG   T   T +G +Y+WG    G  ++G     +++ P K +F++   V +
Sbjct: 165 KNAVTSVSCGANHTLITTSNGSLYSWGIGAFG--VLGTGNINNNFTPSKVVFNSNAEVFI 222

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
           +    G  H+  +   G+++++G G  G LG GN ++   P  ++   G ++  ++CG  
Sbjct: 223 TTCVAGSRHSVALDRDGRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYEISFISCGDS 282

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
           HTA I     DR       G ++TWG A  G+LG       +L PT V  L      Q S
Sbjct: 283 HTACI-----DRF------GSVYTWGSAKSGQLGLGKILSDVLEPTIVESLSGTPITQVS 331

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKG--ISSGSYHV 548
           CG   T+ L+  G +Y  G ++ G          +++ +   +KE   K   I+SG Y  
Sbjct: 332 CGTGYTLALSSSGSIYQWGYSI-GLSQTHDGLSSNVSYIPQIIKELGSKNVYITSGPYSC 390

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           AV+ + G + TWG   N +LG G++ +   P FV  LR+
Sbjct: 391 AVVNAFGDLLTWGIGQNFRLGHGNTNDYAKPKFVPELRN 429



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 45/334 (13%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI-NVQSVSCG 322
           ++ I+ G+ H   VT  G +F WG   +G+LG     D+      E ++ I N  +V  G
Sbjct: 515 IKRIACGSNHTLAVTVNGLLFSWGCNDNGQLGLG---DLRSRVFPEHVTSIENAINVYAG 571

Query: 323 EFQTCALTKS----------GEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              +C ++ S          G ++ +G +  G   +GE  S S   PR++  ++ G+   
Sbjct: 572 VDNSCCISSSSHEEFINDEYGTMWMFGSSCGGKLGLGEGFSSSVMTPREI-RSISGIL-- 628

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           KVA G  HT  ++  G L++ G GT G LG G++ N      V++   +K   VA G  H
Sbjct: 629 KVALGSIHTIALTHDGLLYSCGAGTSGRLGTGSISNSLVFTLVQT--DVKFIDVAVGSSH 686

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL------VDFDF 486
           + AI           ++   L+ WG+   G+   +DG+  L+PT ++ L           
Sbjct: 687 SLAI-----------SLDNNLYGWGE---GKYLPIDGDEILVPTMISTLPSPSGVCKVSS 732

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGIS 542
           V ASC   L +  +G   +   G    GQLG   A + S    ITV    L E+    I+
Sbjct: 733 VVASCNHTLVLARSGY--IVAWGDNKFGQLGIKTASNHSATDFITVPSIVLLEDSAVSIA 790

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER 576
           +  Y      S G  + WG  ++ +LG+GD++E+
Sbjct: 791 TSKYFSVCYNSKGDAFAWGLASDDRLGIGDTKEK 824



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 146/363 (40%), Gaps = 42/363 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD----VSCPKLVECLSGINVQSV 319
           +Q IS+G  H   VT  G V+ WG   +   G+  + D     + P L+   S   ++ +
Sbjct: 462 IQQISVGDAHGVFVTCNGTVYTWG--VNNGTGYNTSKDPLENYTEPCLLNSFSS-KIKRI 518

Query: 320 SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK------ 373
           +CG   T A+T +G +++WG N++G   +G+ RSR    P  +    + + V        
Sbjct: 519 ACGSNHTLAVTVNGLLFSWGCNDNGQLGLGDLRSRV--FPEHVTSIENAINVYAGVDNSC 576

Query: 374 -VACGEWHTAIVSTSGQLFTYGD---GTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            ++       I    G ++ +G    G  G LG G   +V  P+E+ S+ G  +  VA G
Sbjct: 577 CISSSSHEEFINDEYGTMWMFGSSCGGKLG-LGEGFSSSVMTPREIRSISG--ILKVALG 633

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA 489
             HT A+              G L++ G    GRLG       L+ T V    D  F+  
Sbjct: 634 SIHTIALTH-----------DGLLYSCGAGTSGRLGTGSISNSLVFTLVQ--TDVKFIDV 680

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQL-GNPKAKDRSITVVEGKLKEEFVKGISSGSYHV 548
           + G   ++ ++    +Y  G   +  + G+       I+ +        V  + +   H 
Sbjct: 681 AVGSSHSLAISLDNNLYGWGEGKYLPIDGDEILVPTMISTLPSPSGVCKVSSVVASCNHT 740

Query: 549 AVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKS 608
            VL   G +  WG N  GQLG+  +       F+       V S+V       +I   K 
Sbjct: 741 LVLARSGYIVAWGDNKFGQLGIKTASNHSATDFI------TVPSIVLLEDSAVSIATSKY 794

Query: 609 ISV 611
            SV
Sbjct: 795 FSV 797



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 116/274 (42%), Gaps = 42/274 (15%)

Query: 366 LDGVRVSKVACGEWHTAIV--------STSGQLFTYGDGTFGVLGHGNLQNVSQ------ 411
             G  V +V+CG++H+A++         + G +FT+G G  G LG+  + + S+      
Sbjct: 85  FTGKNVVQVSCGDYHSAVLVVPNNRDHKSPGTVFTFGLGNNGRLGY-YIDDDSERRKEKS 143

Query: 412 -----------PKEVESLRGLK--VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
                      P+ V    GLK  V SV+CG  HT                 G L++WG 
Sbjct: 144 DTDEPSWCTPVPQPVGLSIGLKNAVTSVSCGANHTLITTS-----------NGSLYSWGI 192

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC--GRMLTVGLTGLGKVYTMGSAVHGQL 516
              G LG  +      P+ V    + +    +C  G   +V L   G+V++ G   +G+L
Sbjct: 193 GAFGVLGTGNINNNFTPSKVVFNSNAEVFITTCVAGSRHSVALDRDGRVWSWGYGGNGRL 252

Query: 517 GNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS-QE 575
           G    K      +        +  IS G  H A +   GSVYTWG   +GQLGLG    +
Sbjct: 253 GLGNTKSYYSPAMIKIFGGYEISFISCGDSHTACIDRFGSVYTWGSAKSGQLGLGKILSD 312

Query: 576 RETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
              PT VE+L    +  V CG+  T A+    SI
Sbjct: 313 VLEPTIVESLSGTPITQVSCGTGYTLALSSSGSI 346



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 24/236 (10%)

Query: 389 QLFTYGDGTFGVLGHG-NLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSN 447
            + ++G  +F  LG G N+     P  V    G  V  V+CG +H+A +V   V   + +
Sbjct: 55  NVLSWGKISFNCLGQGVNVATSESPGVVPFFTGKNVVQVSCGDYHSAVLV---VPNNRDH 111

Query: 448 AIGGKLFTWGDADKGRLGHV---DGERKL---------------LPTCVTRLVDFDFVQA 489
              G +FT+G  + GRLG+    D ER+                 P  ++  +       
Sbjct: 112 KSPGTVFTFGLGNNGRLGYYIDDDSERRKEKSDTDEPSWCTPVPQPVGLSIGLKNAVTSV 171

Query: 490 SCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT--VVEGKLKEEFVKGISSGSYH 547
           SCG   T+  T  G +Y+ G    G LG     +      VV     E F+    +GS H
Sbjct: 172 SCGANHTLITTSNGSLYSWGIGAFGVLGTGNINNNFTPSKVVFNSNAEVFITTCVAGSRH 231

Query: 548 VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              L   G V++WG   NG+LGLG+++   +P  ++     ++  + CG S TA I
Sbjct: 232 SVALDRDGRVWSWGYGGNGRLGLGNTKSYYSPAMIKIFGGYEISFISCGDSHTACI 287



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +  ++LG+ H   +T +G ++  G G  GRLG     +     LV+  + +    V+ G 
Sbjct: 627 ILKVALGSIHTIALTHDGLLYSCGAGTSGRLGTGSISNSLVFTLVQ--TDVKFIDVAVGS 684

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL---DGV-RVSKVACGEW 379
             + A++    +Y WG   +   + G+       L   +  TL    GV +VS V     
Sbjct: 685 SHSLAISLDNNLYGWGEGKY-LPIDGDE-----ILVPTMISTLPSPSGVCKVSSVVASCN 738

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK--EVESLRGLKVKSVACGPWHTAAIV 437
           HT +++ SG +  +GD  FG LG     N S      V S+  L+  +V+       ++ 
Sbjct: 739 HTLVLARSGYIVAWGDNKFGQLGIKTASNHSATDFITVPSIVLLEDSAVSIATSKYFSV- 797

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL 474
                 C ++   G  F WG A   RLG  D + K++
Sbjct: 798 ------CYNSK--GDAFAWGLASDDRLGIGDTKEKIV 826


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 133/265 (50%), Gaps = 23/265 (8%)

Query: 281 GEVFC-WGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG-EIYTW 338
           G V C WG G+DG+LGH    D   P  +    G ++ SV+CG   T A +KSG ++Y+W
Sbjct: 122 GNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSW 181

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G  + G   +G       ++P  +   L G+R+ +++CG+ H   V+   ++ ++G    
Sbjct: 182 GWGDFGR--LGHGDPSDLFIPHPI-RALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQN 238

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           G LG G  ++   P+++ +  G+++K VA G  H+ AI +            G L+ WG 
Sbjct: 239 GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE-----------DGDLYGWGW 287

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              G LG  D   +L+P  V   +D D  V  SCG   T+ ++  G +YT G + +GQLG
Sbjct: 288 GRYGNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLG 345

Query: 518 NPKAKD----RSITVVEGKLKEEFV 538
           +   +D    R +  +  KL  + +
Sbjct: 346 HGDFEDCLVPRKVQALSDKLISQVI 370



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 129/247 (52%), Gaps = 17/247 (6%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEG-EVFCWGEGKDGRLGH 296
           DG +    T  D LLP  L +    D+ +++ GA +    +K G +V+ WG G  GRLGH
Sbjct: 133 DGQLGHGDTD-DRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH 191

Query: 297 KVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
               D+  P  +  L G+ ++ +SCG+    A+T   ++ +WG N +G   +G  +  SH
Sbjct: 192 GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD-SH 250

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            +P+K+    +G+R+  VA G  H+  ++  G L+ +G G +G LG G+  +   P++V 
Sbjct: 251 -VPQKIL-AFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV- 307

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           ++ G K+  V+CG  HT +I           +  G L+T G +  G+LGH D E  L+P 
Sbjct: 308 NIDGDKIVMVSCGWRHTISI-----------SSSGGLYTHGWSKYGQLGHGDFEDCLVPR 356

Query: 477 CVTRLVD 483
            V  L D
Sbjct: 357 KVQALSD 363



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 15/228 (6%)

Query: 192 TRCPKNESHRLVTPTYGSPL-IERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDA 250
           T+    +   +V+ T G+   + R    KDV  WG G    D G    G  S      D 
Sbjct: 148 TKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG----DFGRLGHGDPS------DL 197

Query: 251 LLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC 310
            +P  + +   L ++ IS G  H   VT E +V  WG  ++G LG     D   P+ +  
Sbjct: 198 FIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILA 257

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
             GI ++ V+ G   + A+T+ G++Y WG   +G   +G+   R   +P K+   +DG +
Sbjct: 258 FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRL--IPEKV--NIDGDK 313

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL 418
           +  V+CG  HT  +S+SG L+T+G   +G LGHG+ ++   P++V++L
Sbjct: 314 IVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 361



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 16/261 (6%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ-LFTY 393
           + +WG    G   +G   +    LP KL    DG  +  V CG  +T   S SG+ ++++
Sbjct: 125 VCSWGRGEDGQ--LGHGDTDDRLLPTKL-SAFDGQDIVSVTCGADYTVARSKSGKDVYSW 181

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G G FG LGHG+  ++  P  + +L+GL++K ++CG  H           C +  +  K+
Sbjct: 182 GWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCH-----------CLAVTMENKV 230

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
            +WG    G LG    +   +P  +           + G   +V +T  G +Y  G   +
Sbjct: 231 LSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRY 290

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           G LG     DR I        ++ V  +S G  H   ++S G +YT G +  GQLG GD 
Sbjct: 291 GNLGLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISISSSGGLYTHGWSKYGQLGHGDF 349

Query: 574 QERETPTFVEALRDRQVESVV 594
           ++   P  V+AL D+ +  V+
Sbjct: 350 EDCLVPRKVQALSDKLISQVI 370



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 11/212 (5%)

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
           ++G G  G LGHG+  +   P ++ +  G  + SV CG        D  V R KS   G 
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG-------ADYTVARSKS---GK 176

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
            +++WG  D GRLGH D     +P  +  L      Q SCG    + +T   KV + G  
Sbjct: 177 DVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRN 236

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            +G+LG    KD  +       +   +K +++G+ H   +T  G +Y WG    G LGLG
Sbjct: 237 QNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           D+ +R  P  V    D+ V  V CG   T +I
Sbjct: 297 DTNDRLIPEKVNIDGDKIV-MVSCGWRHTISI 327



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 1/165 (0%)

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
           + +  ++   G  + +WG  + G+LGH D + +LLPT ++     D V  +CG   TV  
Sbjct: 112 LFNSIQNQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVAR 171

Query: 500 TGLGK-VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           +  GK VY+ G    G+LG+    D  I      L+   +K IS G  H   +T    V 
Sbjct: 172 SKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL 231

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +WG+N NG+LGLG +++   P  + A    +++ V  G+  + AI
Sbjct: 232 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 276



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS-YHVAVLTSGGSVYTWGKN 563
           V + G    GQLG+    DR +         + +  ++ G+ Y VA   SG  VY+WG  
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 184

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
             G+LG GD  +   P  + AL+  +++ + CG     A+ +   +
Sbjct: 185 DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKV 230


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 33/276 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK---------VNMDVS 303
           P L++S   + +   ++GA H   V  +G  + WG  + G+ G +         V  D+ 
Sbjct: 82  PSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV 141

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            PK   C   + V+ V+ G   +  LT+ G ++TWG      D+      +   +P ++ 
Sbjct: 142 IPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI------KQISVPVRV- 192

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             L+ VR+  +A G +H   +   G L+ +G+  +G LG G+ Q  S P  V+ L  L +
Sbjct: 193 QGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL 250

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRL 481
             +A G WH+ A+ +            G+++ WG  + GRLG  D ++  K+LP  V  L
Sbjct: 251 VDIAAGGWHSTALTNE-----------GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLL 299

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              D +Q SCG   +V LT  G++++ G   HG+LG
Sbjct: 300 PGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 58/414 (14%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG G   G +G   D    +  + VDAL P         +V+++  G++++  +  +
Sbjct: 7   VIAWGSGE-DGQLGLGTD-EEKELASVVDALEP--------FNVRSVVGGSRNSLAICDD 56

Query: 281 GEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G++F WG  + G LGH       S P LV+ L+ + +   + G +   A+   G  Y WG
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWG 116

Query: 340 HNNHG-------ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            N +G        D  G    R   +P++    L    V +VA G  H+ +++  G ++T
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQL---TVRQVAAGGTHSVVLTREGYVWT 173

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G         G+++ +S P  V+ L    V+ +A G +H  A+ +            G 
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGLE--NVRLIAVGAFHNLALKE-----------DGT 216

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           L+ WG+ + G+LG  D + +  P  V  L D   V  + G   +  LT  G+VY  G   
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGE 276

Query: 513 HGQLGNPKAKDRSITVVEGK---LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           HG+LG     D+S  ++  K   L  E +  +S G  H   LT  G ++++G+  +G+LG
Sbjct: 277 HGRLGF-GDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335

Query: 570 LG----DSQERETPTFVEALRDR------------QVESVVCGSSITAAICLHK 607
            G      Q  E P  +     R              + V CG   T AI   K
Sbjct: 336 YGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWK 389



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 17/197 (8%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+ I++GA H   + ++G ++ WG  + G+LG       S P  V+ L  + +  ++ G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            + + ALT  GE+Y WG   HG    G+    S  LP+K+ + L G  + +V+CG  H+ 
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV-NLLPGEDIIQVSCGGTHSV 315

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV----------------ESLRGLKVKSV 426
            ++  G++F++G G  G LG+G      QP E+                E       K V
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHV 375

Query: 427 ACGPWHTAAIVDIMVDR 443
           ACG  HT AIV+   D+
Sbjct: 376 ACGGRHTLAIVEWKYDQ 392



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 32/54 (59%)

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           + S  SV  WG   +GQLGLG  +E+E  + V+AL    V SVV GS  + AIC
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC 54


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 51/328 (15%)

Query: 331 KSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQL 390
           +SG ++T+G      +L     +   W+            V  ++CG+ H+A+V+ +G+L
Sbjct: 10  ESGAVFTFGKTRFADNL-----ANKFWIRDD--------AVVNLSCGDEHSAVVTANGKL 56

Query: 391 FTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIG 450
           +T+G   +G LGHGN ++ ++P  V+ L+  KV  VACG  HT A  +            
Sbjct: 57  YTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATE-----------S 105

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G L+++G    G+LGH D E   +P  +  L    +   +CG   +  +T  G++YT GS
Sbjct: 106 GHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGS 165

Query: 511 AVHGQLGNPKAKDRSITV---VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQ 567
              GQ  N   +D  I     + GK     V+ +S G YH+AV+T  GS+Y  G+   G+
Sbjct: 166 CGEGQ--NGLGEDTEIPTRLHLHGK-----VRMVSCGYYHMAVVTEDGSLYMCGEKEGGK 218

Query: 568 LGLGDSQERETPTF--VEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQC----- 620
           LGL   Q   T     ++++ D QV    CG+  TA +  + S+    Q +  Q      
Sbjct: 219 LGLDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSS 277

Query: 621 --------RMPFGFRRKKHNCYNCGLHF 640
                   R+P  F + K    +CG  F
Sbjct: 278 MMETEFPERIPL-FEKVKARTVSCGESF 304



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 170/344 (49%), Gaps = 36/344 (10%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V N+S G +H+A+VT  G+++ +G    G+LGH      + P +V+ L    V  V+CG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             T A T+SG +Y++G    G   +G   +    +P K+ + LD  +   +ACG   +A 
Sbjct: 97  NHTIAATESGHLYSFGCGGDGQ--LGHGDAEDSHVP-KIIEGLDVQKYKHLACGSDFSAA 153

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ +G+L+T+G    G  G G  ++   P  +  L G KV+ V+CG +H A + +     
Sbjct: 154 ITENGELYTWGSCGEGQNGLG--EDTEIPTRLH-LHG-KVRMVSCGYYHMAVVTE----- 204

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL--VDFDFVQASCGRMLTVGLTG 501
                  G L+  G+ + G+LG +D E+    + + ++  ++   V A+CG   T  +T 
Sbjct: 205 ------DGSLYMCGEKEGGKLG-LDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTK 257

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF-------VKGISSGSYHVAVLTSG 554
            G VYT G    GQLG         +++E +  E          + +S G    AV+T  
Sbjct: 258 NGSVYTFGQGNQGQLG------LGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKH 311

Query: 555 GSVYTWGKNANGQLGLGDSQERET--PTFVEALRDRQVESVVCG 596
           G++YT+G   +G+LGLGD     T  P  V+   +  V+ V CG
Sbjct: 312 GNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 21/258 (8%)

Query: 238 DGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK 297
           DG +     + D+ +PK++E   +   ++++ G+  +A +T+ GE++ WG   +G+ G  
Sbjct: 116 DGQLGHGDAE-DSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNG-- 172

Query: 298 VNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHW 357
           +  D   P  +  L G  V+ VSCG +    +T+ G +Y  G    G   +   +  +  
Sbjct: 173 LGEDTEIPTRLH-LHG-KVRMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTS 230

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHG-NLQNVSQPKEVE 416
             +K+    D V V+  ACG   TA+V+ +G ++T+G G  G LG G ++     P+ + 
Sbjct: 231 QLQKIKSIEDQVVVA--ACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIP 288

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD--GERKLL 474
               +K ++V+CG   TA I              G L+T+GD   G+LG  D        
Sbjct: 289 LFEKVKARTVSCGESFTAVITKH-----------GNLYTFGDGRHGKLGLGDECFSNTFK 337

Query: 475 PTCVTRLVDFDFVQASCG 492
           P  V R  +F     +CG
Sbjct: 338 PEKVKRFNNFTVKMVTCG 355



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 101/221 (45%), Gaps = 27/221 (12%)

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           V  SG +FT+G   F      NL N         +R   V +++CG  H+A +       
Sbjct: 8   VPESGAVFTFGKTRFA----DNLANKFW------IRDDAVVNLSCGDEHSAVVT------ 51

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  GKL+T+G  D G+LGH + +    P+ V +L        +CGR  T+  T  G
Sbjct: 52  -----ANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESG 106

Query: 504 KVYTMGSAVHGQLGNPKAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
            +Y+ G    GQLG+  A+D  +  ++EG L  +  K ++ GS   A +T  G +YTWG 
Sbjct: 107 HLYSFGCGGDGQLGHGDAEDSHVPKIIEG-LDVQKYKHLACGSDFSAAITENGELYTWGS 165

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
              GQ GLG+  E  T   +      +V  V CG    A +
Sbjct: 166 CGEGQNGLGEDTEIPTRLHLHG----KVRMVSCGYYHMAVV 202


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 160/365 (43%), Gaps = 89/365 (24%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGR--LGHKVNMDVSCPKLVECLSGINVQSVSC 321
           V  IS G  H+  VT +GE+F WG+   G+  LG  V   VS P+ V+ L+ + V+ V+ 
Sbjct: 124 VVQISAGNHHSCAVTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVAL 183

Query: 322 GEFQTCALTKSGEIYTWGH-------NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV 374
           G   + A+T+ GE  +WG        + H + ++G     S + PR L   LDGV++ ++
Sbjct: 184 GSEHSIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPR-LIKNLDGVKIKRI 242

Query: 375 ACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTA 434
           A G  H+A +   G LF +G  T  V G  N  +  +P  VE ++    + VACG +HT 
Sbjct: 243 AAGMLHSACIDEKGTLFIFGQKTEKVFGRSN--DAPRPTVVEEIQ--FSEEVACGGYHTC 298

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRM 494
           A+ D           GG L++WG  + G LG                             
Sbjct: 299 ALTD-----------GGDLYSWGSNENGCLG----------------------------- 318

Query: 495 LTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
             +G+TG+                     RS  V+   L +  V  +S G  H AV+ SG
Sbjct: 319 --LGVTGM--------------------VRSPEVLRSTLFKLPVSKVSCGWKHTAVI-SG 355

Query: 555 GSVYTW------------GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
             +YTW            G+++ GQLG G+  +   P  VE  R+ +   V CG + T A
Sbjct: 356 EDIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGA 415

Query: 603 ICLHK 607
           I  +K
Sbjct: 416 IFEYK 420



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 150/335 (44%), Gaps = 37/335 (11%)

Query: 286 WGEGKDGRLG-----HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           WG G  GRLG      + N   +CP  +   +G    S++CG   T  LT+SG ++  G 
Sbjct: 39  WGNGDYGRLGLGALESRWN-PTACPFFL-ARAGDPPASLACGGAHTLFLTQSGRVFATGL 96

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
           N+ G   +G   S +H +   +  T  G +V +++ G  H+  V+  G+LF +G  + G 
Sbjct: 97  NDFGQLGIGS--STTH-IVDPIEVTGFGEKVVQISAGNHHSCAVTADGELFVWGKNSSGQ 153

Query: 401 LGHGNL--QNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGD 458
           LG G    + VS P++V+ L  ++V+ VA G  H+ A+ +           GG+  +WG 
Sbjct: 154 LGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTE-----------GGEALSWGA 202

Query: 459 ADKGRLGHVDGERKL---------LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           A  GRLGH      L          P  +  L      + + G + +  +   G ++  G
Sbjct: 203 AGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 262

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
                  G      R   V E +  EE    ++ G YH   LT GG +Y+WG N NG LG
Sbjct: 263 QKTEKVFGRSNDAPRPTVVEEIQFSEE----VACGGYHTCALTDGGDLYSWGSNENGCLG 318

Query: 570 LGDSQERETPTFVEA-LRDRQVESVVCGSSITAAI 603
           LG +    +P  + + L    V  V CG   TA I
Sbjct: 319 LGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI 353



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 25/201 (12%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++   + ++ I+ G  H+A + ++G +F +G+  +   G   + D   P +VE + 
Sbjct: 228 PRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKVFGR--SNDAPRPTVVEEIQ 285

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGA---DLVGERRSRSHWLPRKLFDTLDGV 369
               + V+CG + TCALT  G++Y+WG N +G     + G  RS     P  L  TL  +
Sbjct: 286 --FSEEVACGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRS-----PEVLRSTLFKL 338

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYG----DGTF--------GVLGHGNLQNVSQPKEVES 417
            VSKV+CG  HTA++S    ++T+G    +GTF        G LGHGN  +  +P  VE 
Sbjct: 339 PVSKVSCGWKHTAVISGE-DIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVEL 397

Query: 418 LRGLKVKSVACGPWHTAAIVD 438
            R  +   V+CG  HT AI +
Sbjct: 398 GRNARAVHVSCGFNHTGAIFE 418


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 12/211 (5%)

Query: 358 LPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES 417
           LPR L  + + + V +VACG  HT  ++ SG ++++G GTFG LGHG  ++ S P  V+S
Sbjct: 25  LPRFLRGSRELLFV-RVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           L GL +  +ACG  H+ A+            + G+LF+WG    G+LG    E  L P  
Sbjct: 84  LWGLGIVQIACGDNHSCALT-----------VEGQLFSWGRGKYGQLGCGSVENHLQPVP 132

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF 537
           VT L D    Q  CG   T+ +   G++++ G    GQ G+    +  +  +   L+ + 
Sbjct: 133 VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDN 192

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
           +   S+G+ H   LTSGG VY WG N  GQ+
Sbjct: 193 IVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 16/214 (7%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
           LP+ L  +  L    ++ G+ H   +T  G+V+ +G+G  G LGH      S P +V+ L
Sbjct: 25  LPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSL 84

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLP-RKLFDTLDGVR 370
            G+ +  ++CG+  +CALT  G++++WG   +G    G   +    +P   L D L    
Sbjct: 85  WGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRL---- 140

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           +++V CG  +T  + + GQLF++G G +G  GHG   N+  PK V SL    +   + G 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGA 200

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
            H  A+             GG ++ WGD ++G++
Sbjct: 201 RHAVALTS-----------GGGVYAWGDNEQGQV 223



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 3/154 (1%)

Query: 453 LFTWGDADKGRLGHVDGERKL---LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMG 509
           L +WG  + G+LG  D        LP  +    +  FV+ +CG   T+ LTG G VY+ G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 510 SAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
               G LG+   +  S  V+   L    +  I+ G  H   LT  G +++WG+   GQLG
Sbjct: 61  QGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLG 120

Query: 570 LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G  +    P  V AL DR +  VVCG+  T AI
Sbjct: 121 CGSVENHLQPVPVTALSDRLLTQVVCGADYTMAI 154



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 14/217 (6%)

Query: 390 LFTYGDGTFGVLG---HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           L ++G G FG LG      + N   P+ +   R L    VACG  HT A+          
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTG-------- 52

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
               G ++++G    G LGH   E    P  V  L     VQ +CG   +  LT  G+++
Sbjct: 53  ---SGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLF 109

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
           + G   +GQLG    ++    V    L +  +  +  G+ +   + S G +++WG    G
Sbjct: 110 SWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWG 169

Query: 567 QLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           Q G G       P  V +L +  +     G+    A+
Sbjct: 170 QTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVAL 206



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 91/236 (38%), Gaps = 35/236 (14%)

Query: 116 LLEDATELSQVRSLCGSPSLSLSERCFSDGLSYSSDSFYSSESSSSQIQNLSNIITPSSP 175
            L  + EL  VR  CGS S +L+     D  S+   +F +    +++        + SSP
Sbjct: 28  FLRGSRELLFVRVACGS-SHTLALTGSGDVYSFGQGTFGALGHGTTE--------SCSSP 78

Query: 176 HMETENFMKWELNYADTRCPKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGG 235
            +       W L      C  N S  L              +   +  WG G  G    G
Sbjct: 79  VIVDS---LWGLGIVQIACGDNHSCALT-------------VEGQLFSWGRGKYGQLGCG 122

Query: 236 AVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG 295
           +V+  +      V AL  +LL   V         GA +   +  +G++F WG G  G+ G
Sbjct: 123 SVENHL--QPVPVTALSDRLLTQVVC--------GADYTMAIDSDGQLFSWGHGHWGQTG 172

Query: 296 HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           H    ++  PKLV  L   N+   S G     ALT  G +Y WG N  G  L G R
Sbjct: 173 HGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVLPGGR 228


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 143/313 (45%), Gaps = 21/313 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCG 322
           V NIS    HAA VT+ G+VF  G+      GH  V   +  P  +E L G   + V+ G
Sbjct: 156 VVNISAFHNHAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATG 215

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEWHT 381
              T  LT+ G++YT G N HG    G+   R+     K+ +  +G   V +VA G  +T
Sbjct: 216 LSFTVILTREGQVYTCGSNTHGQLGHGDTIDRA---APKIIELFEGSSPVVQVAAGASYT 272

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGLKVKSVACGPWHTAAIVDI 439
             V+  G + ++G  T   LGHG+  N   P+ ++S   R + V  V+ G  H  A+  +
Sbjct: 273 FAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 332

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                      G ++TWG    G LGH D   K  P  +  L     VQ    +  T  L
Sbjct: 333 -----------GYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVL 381

Query: 500 TGLGKVYTMGSAVHGQLGNP--KAKDRSI-TVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
           T  G V   G    G LG P  ++ D+ +   V   L+  +V  IS+G YH   +T+ G 
Sbjct: 382 TDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGI 441

Query: 557 VYTWGKNANGQLG 569
           V+ +G N   QLG
Sbjct: 442 VFGFGDNERAQLG 454



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 151/353 (42%), Gaps = 39/353 (11%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD-------VSCPKLVECLSGINVQSV 319
           ++ G  H  LV  +  V+  G    G LGH  +         VS P L        V ++
Sbjct: 107 VATGRYHTLLV-HDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSR------VVNI 159

Query: 320 SCGEFQTCALTKSGEIYTWGHNNH---GADLVGERRSRSHWLPRKLFDTLDGVRVSKVAC 376
           S        +T++G+++T G N+    G   VG    R+ + P ++ + L G    +VA 
Sbjct: 160 SAFHNHAAFVTETGQVFTCGDNSSLCCGHGDVG----RTIFRPTQI-EALKGTFCKQVAT 214

Query: 377 GEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK-VKSVACGPWHTAA 435
           G   T I++  GQ++T G  T G LGHG+  + + PK +E   G   V  VA G  +T A
Sbjct: 215 GLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFA 274

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV--DFDFVQASCGR 493
           + D            G + ++G      LGH D   +LLP  +      +   V+ S G 
Sbjct: 275 VTD-----------DGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGD 323

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTS 553
              V L  LG VYT G    G LG+    D++   + G LK +    + +      VLT 
Sbjct: 324 EHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTD 383

Query: 554 GGSVYTWGKNANGQLGLGDSQERE---TPTFVEALRDRQVESVVCGSSITAAI 603
            GSV  +G    G LG  D +  +    P  +++LR   V  +  G   T A+
Sbjct: 384 EGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAV 436



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 20/271 (7%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +E+      + ++ G     ++T+EG+V+  G    G+LGH   +D + PK++E   
Sbjct: 198 PTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFE 257

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL--FDTLDGV 369
           G + V  V+ G   T A+T  G ++++G   +    +G     +  LPR +  F   + +
Sbjct: 258 GSSPVVQVAAGASYTFAVTDDGTVHSFGSCTN--FCLGHGDQHNELLPRAIQSFKRRN-I 314

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG 429
            V +V+ G+ H   +   G ++T+G G  G LGHG+  + + P+ + SL+G     V   
Sbjct: 315 HVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCAR 374

Query: 430 PWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFV 487
              T  + D            G +  +G    G LG  D E   K++  CV   +   +V
Sbjct: 375 KRKTFVLTD-----------EGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYV 423

Query: 488 -QASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
            Q S G   TV +T  G V+  G     QLG
Sbjct: 424 SQISTGLYHTVAVTNKGIVFGFGDNERAQLG 454



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q + LLP+ ++S     + V  +S G +HA  +   G V+ WG G  G LGH    D + 
Sbjct: 297 QHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 356

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+L+  L G     V   + +T  LT  G +  +G    G+    +R S    +   + D
Sbjct: 357 PELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLD 416

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
           +L G  VS+++ G +HT  V+  G +F +GD     LG   ++   +P E+
Sbjct: 417 SLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEI 467



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGL-KVKSVACGPW 431
           +VA G +HT +V  S  +++ G    GVLGHG            S   L +V +++    
Sbjct: 106 QVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHN 164

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLL-PTCVTRLVDFDFVQAS 490
           H A + +            G++FT GD      GH D  R +  PT +  L      Q +
Sbjct: 165 HAAFVTET-----------GQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVA 213

Query: 491 CGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRS----ITVVEGKLKEEFVKGISSGSY 546
            G   TV LT  G+VYT GS  HGQLG+    DR+    I + EG      V  +++G+ 
Sbjct: 214 TGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSP---VVQVAAGAS 270

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESV 593
           +   +T  G+V+++G   N  LG GD      P  +++ + R +  V
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVV 317



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 87/212 (41%), Gaps = 38/212 (17%)

Query: 406 LQNVSQPKE-VESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRL 464
           LQ+V Q  + VE+  G     VA G +HT  + D  V  C S+  G             L
Sbjct: 88  LQSVEQSSDTVETSSG--NMQVATGRYHTLLVHDSSVYSCGSSLCG------------VL 133

Query: 465 GH-------VDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS-----AV 512
           GH       V   R   P  ++R+V+               +T  G+V+T G        
Sbjct: 134 GHGPDTTQCVAFSRVSFPA-LSRVVNISAFHNHAAF-----VTETGQVFTCGDNSSLCCG 187

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           HG +G    +   I      LK  F K +++G     +LT  G VYT G N +GQLG GD
Sbjct: 188 HGDVGRTIFRPTQIEA----LKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHGD 243

Query: 573 SQERETPTFVEALRDRQ-VESVVCGSSITAAI 603
           + +R  P  +E       V  V  G+S T A+
Sbjct: 244 TIDRAAPKIIELFEGSSPVVQVAAGASYTFAV 275


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 162/364 (44%), Gaps = 42/364 (11%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           DV  ++  +  +A + K G+++ WG  K G LG+    +++ P LV+CL  ++ + V+CG
Sbjct: 61  DVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACG 120

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR-------------KLFDTLD-G 368
            +   A+T  G++YTWG+ +HG   +G     S  LP              KL + +   
Sbjct: 121 NYHMAAITTDGQLYTWGNFDHGK--LGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLN 178

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP--KEVESLRGLKVKSV 426
            +V +VA G+  T I+S  G +++ G    G+LG+   +NV +P  K++  L+ +     
Sbjct: 179 FKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGY-QTKNVDEPTFKQIPDLKNI----- 232

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
                     +D   D   +    G +F WG    G+LG         P  +  L     
Sbjct: 233 --------VQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGLPKIK- 283

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
            Q SCG      L+  G +YT G    GQLG P  +D  I        ++ +  +S G  
Sbjct: 284 -QFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQD--IPTPHKIQFDQNIDKVSCGQA 340

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT---FVEALRDRQVESVVCGSSITAAI 603
           HV ++ S   +Y  G+   GQLG G   E E+P    +   L    V  + CG S + A+
Sbjct: 341 HVGIV-SKNKLYMHGRGKEGQLGRGS--ETESPNSSRYSPLLVMENVIKIACGGSHSFAV 397

Query: 604 CLHK 607
              K
Sbjct: 398 VNQK 401



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 137/297 (46%), Gaps = 39/297 (13%)

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           F +  +    ++Y WG NN G   +G   S S + P+ L    D   V  VAC    +A 
Sbjct: 21  FTSSFVFSQEQLYAWGWNNFGQ--LGIGNSISQYSPQ-LVPIQD---VLFVACKSSVSAA 74

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +  SG+L+T+G   FG+LG+G ++N++ P  V+ L+ L  K VACG +H AAI       
Sbjct: 75  IDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACGNYHMAAI------- 127

Query: 444 CKSNAIGGKLFTWGDADKGRLGH-VDGERKL----------------LPTCVTRLVDFDF 486
                  G+L+TWG+ D G+LGH  D   KL                LP  V   ++F  
Sbjct: 128 ----TTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQ--LNFKV 181

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
            Q + G   T+ L+  G VY++G    G LG         T  +    +  V+ I SG+ 
Sbjct: 182 QQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDEPTFKQIPDLKNIVQ-IDSGTD 240

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               L S G+++ WG N  GQLG       +TP  ++ L   +++   CG     A+
Sbjct: 241 FSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGL--PKIKQFSCGEQFIGAL 295



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 161/353 (45%), Gaps = 45/353 (12%)

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           ++ V  + +++ WG    G+LG   ++    P+LV      +V  V+C    + A+ KSG
Sbjct: 23  SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPIQ---DVLFVACKSSVSAAIDKSG 79

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++YTWG +  G  L+G  +  +  +P  L   L  +    VACG +H A ++T GQL+T+
Sbjct: 80  KLYTWGRSKFG--LLGNGQVENINVP-SLVQCLKHLDFKFVACGNYHMAAITTDGQLYTW 136

Query: 394 GDGTFGVLGHG-----------------NLQNVSQPKEVESLRGLKVKSVACGPWHTAAI 436
           G+   G LGH                  NL +   P+ V+     KV+ VA G   T  +
Sbjct: 137 GNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQ--LNFKVQQVALGDQFTIIL 194

Query: 437 VDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF-DFVQASCGRML 495
            +            G +++ G   KG LG+    + +      ++ D  + VQ   G   
Sbjct: 195 SE-----------DGNVYSVGLNKKGILGYQ--TKNVDEPTFKQIPDLKNIVQIDSGTDF 241

Query: 496 TVGLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
           +V L   G ++  GS   GQLG P  +  ++   ++G  K   +K  S G   +  L++ 
Sbjct: 242 SVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGLPK---IKQFSCGEQFIGALSTD 298

Query: 555 GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
           G +YTWG   +GQLG    Q+  TP  ++   D+ ++ V CG +    +  +K
Sbjct: 299 GVLYTWGFGGDGQLGTPSKQDIPTPHKIQF--DQNIDKVSCGQAHVGIVSKNK 349



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 47/322 (14%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP------ 305
           +P L++    LD + ++ G  H A +T +G+++ WG    G+LGH  +     P      
Sbjct: 102 VPSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYE 161

Query: 306 --------KLVECLS-GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
                   KL E +     VQ V+ G+  T  L++ G +Y+ G N  G  ++G +     
Sbjct: 162 YQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKG--ILGYQTKN-- 217

Query: 357 WLPRKLFDTLDGVR-VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            +    F  +  ++ + ++  G   +  + + G +F +G   FG LG  +   V  P+++
Sbjct: 218 -VDEPTFKQIPDLKNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQI 276

Query: 416 ESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
           + L   K+K  +CG     A+           +  G L+TWG    G+LG     ++ +P
Sbjct: 277 KGLP--KIKQFSCGEQFIGAL-----------STDGVLYTWGFGGDGQLG--TPSKQDIP 321

Query: 476 TCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG------NPKAKDRSITVV 529
           T      D +  + SCG+   VG+    K+Y  G    GQLG      +P +   S  +V
Sbjct: 322 TPHKIQFDQNIDKVSCGQA-HVGIVSKNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLV 380

Query: 530 EGKLKEEFVKGISSGSYHVAVL 551
                E  +K    GS+  AV+
Sbjct: 381 ----MENVIKIACGGSHSFAVV 398


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 24/337 (7%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      +S P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G NN G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ NV  P++V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFV--------- 205

Query: 446 SNAIGGKLFTWGDADKGRLG---HVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                G+L+ +G+ + G+LG    + G  +  P  V+ + +   +Q +CG   TV LT  
Sbjct: 206 --TTDGELYVFGEPENGKLGLPNQLLGNHR-TPQLVSEIPE-KVIQVACGGEHTVVLTE- 260

Query: 503 GKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
             VYT G    GQLG      + S   V   ++++ +  IS G  H A++T  G +YT+G
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 562 KNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
              +G+LGLG  +      PT         V+ V CG
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 24/290 (8%)

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           +SCG+  +  +T + ++Y +G NN G   +G + + S     K    L   +V   ACG 
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVK---ALKPEKVKLAACGR 96

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG-LKVKSVACGPWHTAAIV 437
            HT + +  G ++  G    G LG G+ +  +    +       K+K ++ G   +AA+ 
Sbjct: 97  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 438 DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
           +            G+LF WGD  +G++G  +     +P  VT      ++  SCG   + 
Sbjct: 157 E-----------DGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSA 203

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            +T  G++Y  G   +G+LG P       R+  +V  ++ E+ ++ ++ G  H  VLT  
Sbjct: 204 FVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGEHTVVLTEN 261

Query: 555 GSVYTWGKNANGQLGLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
            +VYT+G    GQLGLG    E   P  +E +RD+ +  + CG + TA I
Sbjct: 262 -AVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEAL-RDRQVESVVCGSSITAAI 603
           H  V T GG+VY  G N  GQLGLGD++ER T   +     + +++ +  GS+ +AA+
Sbjct: 98  HTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 143/298 (47%), Gaps = 22/298 (7%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
           A  A  +T   EVF +G      LG   N     PK +E LSG  ++S+S G      L 
Sbjct: 30  ANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLS 89

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           T+ GE+Y WGHN  G   +G   +     P ++   L   +V +VACG  H+  +S+ G 
Sbjct: 90  TEDGEVYAWGHN--GYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGD 147

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           ++ +G    G +G G+  N   P++V + L+   V S+ACG   + AIVD          
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVD---------- 197

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+++ WG    G+LG  +   +L P  V  L     +Q +CG   T+ LT  G +Y+ 
Sbjct: 198 -NGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSW 256

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKL---KEEFVKGISSGSYHV-AVLTSGGSVYTWGK 562
           G+  +GQLG     ++S  +  G++   KE  V+  +  S H  A  T  G VY WG+
Sbjct: 257 GANTYGQLG---TGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWGQ 311



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 15/227 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
           ++PK LES     ++++S G+  H  L T++GEV+ WG     +LG+   N  V+  ++ 
Sbjct: 62  IVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVC 121

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L    V  V+CG   + AL+  G++Y WG+NN G   VG   + +   PRK+ + L  
Sbjct: 122 TNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQ--VGSGSTANQPTPRKVSNCLQT 179

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             V  +ACG+  +  +  +G+++ +G    G LG GN  N   P  V +L+G+ +  +AC
Sbjct: 180 KIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIAC 239

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP 475
           G  HT A+ D            G +++WG    G+LG  +   +L P
Sbjct: 240 GYAHTLALTD-----------EGLMYSWGANTYGQLGTGNKSNQLSP 275



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 117/237 (49%), Gaps = 14/237 (5%)

Query: 201 RLVTPTYGS-PLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESA 259
           R+ + +YGS P +       +V  WG         G  +  V+  +   + L+ K++E  
Sbjct: 74  RIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIE-- 131

Query: 260 VMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP-KLVECLSGINVQS 318
                  ++ G+ H+  ++ +G+V+ WG    G++G     +   P K+  CL    V S
Sbjct: 132 -------VACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVS 184

Query: 319 VSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGE 378
           ++CG+  + A+  +GE+Y WG+N +G   +G   + +   P ++   L GV + ++ACG 
Sbjct: 185 IACGQTSSVAIVDNGEVYGWGYNGNGQ--LGLGNNGNQLTPCRV-AALQGVCIMQIACGY 241

Query: 379 WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
            HT  ++  G ++++G  T+G LG GN  N   P ++   +   V+  AC   HT+A
Sbjct: 242 AHTLALTDEGLMYSWGANTYGQLGTGNKSNQLSPGQILMEKERVVEIAACHSAHTSA 298



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 17/277 (6%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST-S 387
           +T + E++ +G N   ++ +G   ++S  +P+KL ++L G R+  ++ G     ++ST  
Sbjct: 36  ITHNDEVFVFGLN--CSNCLGTGDNQSTIVPKKL-ESLSGKRIRSLSYGSGPHVVLSTED 92

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           G+++ +G   +  LG+G       P +V  +L   KV  VACG  H+ A+          
Sbjct: 93  GEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLAL---------- 142

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKV 505
            +  G ++ WG  + G++G      +  P  V+  +    V + +CG+  +V +   G+V
Sbjct: 143 -SSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEV 201

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  G   +GQLG     ++        L+   +  I+ G  H   LT  G +Y+WG N  
Sbjct: 202 YGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTY 261

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           GQLG G+   + +P  +   ++R VE   C S+ T+A
Sbjct: 262 GQLGTGNKSNQLSPGQILMEKERVVEIAACHSAHTSA 298



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 16/224 (7%)

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA--CGPWHTAAIVDIMV 441
           ++ + ++F +G      LG G+ Q+   PK++ESL G +++S++   GP    +  D   
Sbjct: 36  ITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTED--- 92

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLT 500
                    G+++ WG     +LG+    + + P  V T L+    ++ +CG   ++ L+
Sbjct: 93  ---------GEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALS 143

Query: 501 GLGKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
             G VY  G    GQ+G+   A   +   V   L+ + V  I+ G      +   G VY 
Sbjct: 144 SDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYG 203

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           WG N NGQLGLG++  + TP  V AL+   +  + CG + T A+
Sbjct: 204 WGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLAL 247



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +I+ G   +  +   GEV+ WG   +G+LG   N +   P  V  L G+ +  ++CG 
Sbjct: 182 VVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGY 241

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV-ACGEWHTA 382
             T ALT  G +Y+WG N +G   +G     +   P ++   ++  RV ++ AC   HT+
Sbjct: 242 AHTLALTDEGLMYSWGANTYGQ--LGTGNKSNQLSPGQIL--MEKERVVEIAACHSAHTS 297

Query: 383 IVST-SGQLFTYG 394
              T SG ++ +G
Sbjct: 298 AAKTQSGLVYMWG 310


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 18/280 (6%)

Query: 239 GSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKV 298
           G + Q K+Q     P L+      ++ +++ G   +  + + G +F WG   +G L  K 
Sbjct: 61  GQLGQQKSQCR---PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQ 117

Query: 299 NMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWL 358
           +  +  PKL++ +   +V  V+CG     ALT+ G I +WG N  G   +G   S   +L
Sbjct: 118 D-SLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQ--LGLGSSEIEFL 174

Query: 359 PRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNV-SQPKEVES 417
              +  +L+   +S++  G +H+ ++S SG LFT+G   +G LGHGN  +  S P+ V++
Sbjct: 175 EPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKT 234

Query: 418 LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTC 477
           LR  +V  VA G  H+          C++    G +F+WG    G+LGH        P  
Sbjct: 235 LRHQEVVFVAMGEEHSV---------CRTR--NGGVFSWGHGGNGQLGHNSMANVTQPKK 283

Query: 478 VTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
           +  L+     Q  CGR  T+ LT   K+   G   + QLG
Sbjct: 284 IMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 23/338 (6%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC-PKLVECLSGINVQSVSCG 322
           V +I+ G +H   +T   +V+  G  + G+LG + +    C P LV       +  V+ G
Sbjct: 33  VISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKS---QCRPSLVTGFGAEEIFHVAAG 89

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +F + A+ +SG ++ WG + +G +L+ ++ S       KL D +    V +VACG  H  
Sbjct: 90  DFFSIAIAESGLLFGWGRSLNG-ELMCKQDSLHE---PKLLDKIMHWSVVQVACGAQHCI 145

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQ-NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMV 441
            ++  G + ++G  T G LG G+ +    +P  + SL    +  +  G +H+  +     
Sbjct: 146 ALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVL----- 200

Query: 442 DRCKSNAIGGKLFTWGDADKGRLGHVDGER-KLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
                 +  G LFTWG  + G+LGH + +  +  P  V  L   + V  + G   +V  T
Sbjct: 201 ------SPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRT 254

Query: 501 GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
             G V++ G   +GQLG+    + +      +L    V  I  G  H   LT    +  +
Sbjct: 255 RNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGF 314

Query: 561 GKNANGQLGLGDSQERETPTF--VEALRDRQVESVVCG 596
           G N+N QLG  +      P    +    DRQ+  +  G
Sbjct: 315 GLNSNNQLGTHNDTSARLPITIPISLTDDRQLSCIAAG 352



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 145/325 (44%), Gaps = 24/325 (7%)

Query: 283 VFCWGEGKDGRLG-HKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHN 341
           ++ WG+   G+LG    NM +SCP  ++  +  +V S++ G   T  LT + ++Y+ G N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 342 NHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVL 401
             G   +G+++S+       L        +  VA G++ +  ++ SG LF +G    G L
Sbjct: 59  EFGQ--LGQQKSQCR---PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 402 GHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADK 461
                 ++ +PK ++ +    V  VACG  H  A+ +            G + +WG   +
Sbjct: 114 -MCKQDSLHEPKLLDKIMHWSVVQVACGAQHCIALTE-----------EGTILSWGSNTQ 161

Query: 462 GRLGHVDGERKLL-PTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG--N 518
           G+LG    E + L PT +  L  F   Q   G   +  L+  G ++T G    GQLG  N
Sbjct: 162 GQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGN 221

Query: 519 PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERET 578
             +   S  +V+  L+ + V  ++ G  H    T  G V++WG   NGQLG         
Sbjct: 222 SDSFQSSPRLVK-TLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQ 280

Query: 579 PTFVEALRDRQVESVVCGSSITAAI 603
           P  +  L    V  + CG   T ++
Sbjct: 281 PKKIMELMGTTVCQICCGRRHTISL 305



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
           G    G +    ++++ L P ++ S     +  I  GA H+ +++  G +F WG+   G+
Sbjct: 157 GSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQ 216

Query: 294 LGHKVNMDV--SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGER 351
           LGH  N D   S P+LV+ L    V  V+ GE  +   T++G +++WGH  +G   +G  
Sbjct: 217 LGHG-NSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQ--LGHN 273

Query: 352 RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGN 405
              +   P+K+ + L G  V ++ CG  HT  ++   +L  +G  +   LG  N
Sbjct: 274 SMANVTQPKKIME-LMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHN 326



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P+L+++    +V  +++G +H+   T+ G VF WG G +G+LGH    +V+ PK +  L 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELM 288

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTL-DGVRV 371
           G  V  + CG   T +LT   ++  +G N++  + +G     S  LP  +  +L D  ++
Sbjct: 289 GTTVCQICCGRRHTISLTDKRKLLGFGLNSN--NQLGTHNDTSARLPITIPISLTDDRQL 346

Query: 372 SKVACG 377
           S +A G
Sbjct: 347 SCIAAG 352


>gi|449663407|ref|XP_002166698.2| PREDICTED: uncharacterized protein LOC100197214 [Hydra
            magnipapillata]
          Length = 1459

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 177/406 (43%), Gaps = 51/406 (12%)

Query: 216  DILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVML--DVQNISLGAKH 273
            +++  +  WG     G  G   DG V         L+P+L+E    L   V +IS G   
Sbjct: 803  NVMAKIYCWGLSK-NGQAGPCKDGKV---------LIPQLIEYDHKLYGHVIDISAGGLF 852

Query: 274  AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL--SGINVQSVSCGEFQTCALTK 331
             A +T    +  +G GK GRL   VN + S   +      S  N+ ++SCG +  C LT+
Sbjct: 853  TAAITDRNYILSFGCGKYGRLAGSVNEEDSKNIIAYKFDDSNKNLSAISCGIWHACILTQ 912

Query: 332  SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
             G +Y WG++           + +   P+K    +D + V  +ACG   T   +T G+ +
Sbjct: 913  CGSVYVWGYSKACGS------TNNMLTPQK----VDLLNVVGIACGNNFTLCWTTCGKAY 962

Query: 392  TYGDGTFGVLGHGN--LQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI 449
            ++G    GVLGHGN   +    PKE+       +  ++ G  H  A+             
Sbjct: 963  SWGVNNHGVLGHGNSSYKIEDSPKEITGFCDHFIVQMSAGTTHCGAVTK----------- 1011

Query: 450  GGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCG--RMLTVGLTGLGKV 505
             G LF WG+   G LG V GE K  L P  V  + +   +  + G     ++ LT  G++
Sbjct: 1012 DGYLFVWGNNKYGALGIV-GETKDILKPKLVDNVSNVKQISCNIGDNHGHSLLLTTSGRL 1070

Query: 506  YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
            +  G    G+LG       S ++ + + K  FV+ I SG  H A ++  G ++TWG  ++
Sbjct: 1071 FASGDGYKGKLG--LGNFNSSSIFQNQSKINFVQ-ICSGGIHSAGVSDTGELFTWGCGSD 1127

Query: 566  GQLGLGDSQ------ERETPTFVEALRDRQVESVVCGSSITAAICL 605
            G+LG  ++           P  VEA   ++V  V      T A+ L
Sbjct: 1128 GRLGHPEAAGHRYLYHSNIPKAVEAFSKKRVLKVSASYYHTVALEL 1173


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 157/356 (44%), Gaps = 58/356 (16%)

Query: 248 VDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
           +D L P+ +    +  V  +S G +HAA +   G+VF WG G  G+LG   N     P+ 
Sbjct: 68  LDVLYPQKVN---LEGVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQP 124

Query: 308 VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
           +     + V+++SCG   +  +T+ G +Y  G    G   +G     S   P ++     
Sbjct: 125 LSFP--MPVKALSCGGSHSLFITEDGRLYATGRGKEGQ--LGTGSQESVLSPVEVQMPEG 180

Query: 368 GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQ-PKEVESLRGLKVKSV 426
             RV    CG+  + I + SGQ+FT+G   +G LG G     +  PKEV  L G  V+S+
Sbjct: 181 SGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSI 240

Query: 427 ACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
           A G +H AA+              GKL+TWG    G+LG+ +     LP  V  L +   
Sbjct: 241 AAGDYHAAAVTS-----------DGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRV 289

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
              +CG                              D ++ V++  LKE+ +  ISS   
Sbjct: 290 QSVACG-----------------------------CDHTVAVIDRGLKEQLML-ISS--- 316

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
              VL S G V+  G+   GQLG GD    E+P    ++   QV+ V CG+S T A
Sbjct: 317 --QVLES-GEVFVMGRGREGQLGRGDIV--ESPAVYRSV-PLQVQQVACGTSHTLA 366



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 148/281 (52%), Gaps = 27/281 (9%)

Query: 220 DVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTK 279
           DV +WG G   G +G      +  NK+      P+ L  +  + V+ +S G  H+  +T+
Sbjct: 99  DVFVWGRG-FSGQLG------LGTNKSH---FTPQPL--SFPMPVKALSCGGSHSLFITE 146

Query: 280 EGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN-VQSVSCGEFQTCALTKSGEIYTW 338
           +G ++  G GK+G+LG      V  P  V+   G   V++  CG+  +   T+SG+++T+
Sbjct: 147 DGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTF 206

Query: 339 GHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTF 398
           G +++G   +G+  +R    P+++   L G  V  +A G++H A V++ G+L+T+G G  
Sbjct: 207 GSDDYGQLGLGQF-ARYAMTPKEV-AVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRS 264

Query: 399 GVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD------IMVDRCKSNAI-GG 451
           G LG+GN  +VS P  V  L+ L+V+SVACG  HT A++D      +M+    S  +  G
Sbjct: 265 GQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLML--ISSQVLESG 322

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           ++F  G   +G+LG  D    +    V R V     Q +CG
Sbjct: 323 EVFVMGRGREGQLGRGD---IVESPAVYRSVPLQVQQVACG 360



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 26/271 (9%)

Query: 335 IYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYG 394
           +Y WG       L+G   +     P+K+   L+GV  + V+ G  H A +   G +F +G
Sbjct: 56  MYCWG-------LLGLGETLDVLYPQKV--NLEGV--TCVSAGHRHAAAIVGGGDVFVWG 104

Query: 395 DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLF 454
            G  G LG G  ++   P+ +     + VK+++CG  H+  I +            G+L+
Sbjct: 105 RGFSGQLGLGTNKSHFTPQPLSFP--MPVKALSCGGSHSLFITE-----------DGRLY 151

Query: 455 TWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS-CGRMLTVGLTGLGKVYTMGSAVH 513
             G   +G+LG    E  L P  V        V+A+ CG+  +V  T  G+V+T GS  +
Sbjct: 152 ATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDY 211

Query: 514 GQLGNPKAKDRSITVVE-GKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGD 572
           GQLG  +    ++T  E   L  + V+ I++G YH A +TS G +YTWG   +GQLG G+
Sbjct: 212 GQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGN 271

Query: 573 SQERETPTFVEALRDRQVESVVCGSSITAAI 603
           + +   P  V  L++ +V+SV CG   T A+
Sbjct: 272 TVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302


>gi|119571520|gb|EAW51135.1| NIMA (never in mitosis gene a)- related kinase 8, isoform CRA_a
           [Homo sapiens]
          Length = 364

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 138/306 (45%), Gaps = 29/306 (9%)

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGAD----LVGERRSRSHWLPRKLFDTLDGVRV 371
           V  V+ G  Q   +T+SG +  W     GA     L G           +  +   GV +
Sbjct: 6   VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTI 65

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
             VACG++ TA ++  G + T+G G+ G LGHG+L ++SQP  VE+L G ++  VACG  
Sbjct: 66  KHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGAS 125

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
           H   ++ +  +R        +LF WG  D GRLG    E    P  V      +  +  C
Sbjct: 126 H---VLALSTER--------ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVC 174

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLG--------NPKAKDR-----SITVV-EGKLKEEF 537
           G   ++ LT  G+    GS    +LG         P    +     S T++    L +E 
Sbjct: 175 GIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEP 234

Query: 538 VKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           +  I  G+ H A +T+ G  YT+G N +GQLG    +    P  V+ L   ++  V CG 
Sbjct: 235 LLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGD 294

Query: 598 SITAAI 603
           + T AI
Sbjct: 295 AFTVAI 300



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 13/302 (4%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           +++W    LG   G  + G+V Q + Q    + + LE    + +++++ G    A +T  
Sbjct: 25  LILWEAPPLGAGGGSLLPGAVEQPQPQ---FISRFLEGQSGVTIKHVACGDFFTACLTDR 81

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGH 340
           G +  +G G +G LGH    D+S P +VE L G  +  V+CG     AL+   E++ WG 
Sbjct: 82  GIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGR 141

Query: 341 NNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGV 400
            + G   +G R   SH  P+++     G    +V CG   + I++  GQ    G   F  
Sbjct: 142 GDSGRLGLGTR--ESHSCPQQV-PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 198

Query: 401 LGHGNLQNVSQP---KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFT 455
           LG  +L    +P   ++VE    L    +   P     ++ I +    S A+   G  +T
Sbjct: 199 LGLDHLSLGEEPVPHQQVE--EALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 256

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           +G    G+LG         P  V  L        +CG   TV +    +VY+ G    G+
Sbjct: 257 FGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGR 316

Query: 516 LG 517
           LG
Sbjct: 317 LG 318



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 148/356 (41%), Gaps = 38/356 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCW-----GEGKDGRLGHKVNMDVS--CPKLVECLSGIN 315
           +V  ++ G    A VT+ G +  W     G G    L   V         + +E  SG+ 
Sbjct: 5   EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 64

Query: 316 VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA 375
           ++ V+CG+F T  LT  G I T+G  ++G    G     S      + + L G  + +VA
Sbjct: 65  IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQ---PTIVEALLGYEMVQVA 121

Query: 376 CGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAA 435
           CG  H   +ST  +LF +G G  G LG G  ++ S P++V    G + + V CG      
Sbjct: 122 CGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCG------ 175

Query: 436 IVDIMVDRCKSNAIGGKLFTWGDADKGRLG--HVD-GERKLLPTCVTRLVDFDFVQAS-- 490
                +D      + G+    G     +LG  H+  GE  +    V   + F  + ++  
Sbjct: 176 -----IDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPL 230

Query: 491 ---------CGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKG 540
                     G   +  +T  G  YT GS  HGQLG N +   R+   V+G L+   +  
Sbjct: 231 DQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAM 289

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQE-RETPTFVEALRDRQVESVVC 595
           ++ G      + +   VY+WGK A G+LG  D       P  ++      V SV C
Sbjct: 290 VACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 345



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)

Query: 481 LVDFDFVQASCGRMLTVGLTGLGKVYTM---------GSAVHGQLGNPKAKDRSITVVEG 531
           +++ + VQ + GR    G+T  G++            GS + G +  P+ +  S   +EG
Sbjct: 1   MLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFIS-RFLEG 59

Query: 532 KLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVE 591
           +     +K ++ G +  A LT  G + T+G  +NG LG G   +   PT VEAL   ++ 
Sbjct: 60  Q-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMV 118

Query: 592 SVVCGSSITAAICLHKSISV---GDQSSCSQCRMPFGFRRKKHNC 633
            V CG+S   A+   + +     GD       R+  G  R+ H+C
Sbjct: 119 QVACGASHVLALSTERELFAWGRGDSG-----RLGLG-TRESHSC 157


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 23/279 (8%)

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW----HTAIVS 385
           T + EI+  G N  G   +G+ +S     PR+L    D +   K+AC  +    H  + +
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDVQSTLE--PRRL----DSLSDKKIACLSYGSGPHIVLAT 115

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRC 444
           T G++F++G   +G LG+G + +   P  + + L   +V  VACG +H+  +        
Sbjct: 116 TEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTS------ 169

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLG 503
                 G++F WG  + G++G      + +P  VT  L +   V  +CG+M ++ +   G
Sbjct: 170 -----DGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTG 224

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +VY  G   +GQLG   + ++        L+   V+ ++ G  H  VLT  G VY WG N
Sbjct: 225 EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           + GQLG G+   +  PT V   +DR +E   C S+ T+A
Sbjct: 285 SYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 26/260 (10%)

Query: 201 RLVTPTYGS-PLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESA 259
           ++   +YGS P I       +V  WG    G  +G         N T    L+P  + + 
Sbjct: 99  KIACLSYGSGPHIVLATTEGEVFSWGHNAYG-QLG---------NGTINHGLVPSHISTN 148

Query: 260 VM-LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQ 317
           +    V  ++ G+ H+ ++T +GEVF WG    G++G     + + P+ V  CL    V 
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVV 208

Query: 318 SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
           +++CG+  + A+  +GE+Y WG+N +G   +G   S +   P ++   L G+RV +VACG
Sbjct: 209 NIACGQMCSMAVVDTGEVYVWGYNGNGQ--LGLGSSGNQPTPCRV-AALQGIRVQRVACG 265

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
             HT +++  GQ++ +G  ++G LG GN  N S P  V   +   ++  AC   HT+A  
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA-- 323

Query: 438 DIMVDRCKSNAIGGKLFTWG 457
                   +   GG ++ WG
Sbjct: 324 --------AKTQGGHVYMWG 335



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEIY 336
           T   E+F  G    G LG         P+ ++ LS   +  +S G      L T  GE++
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVF 121

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           +WGHN +G   +G        +P  +   L   +V++VACG +H+ ++++ G++F +G  
Sbjct: 122 SWGHNAYGQ--LGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN 179

Query: 397 TFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G +G G+  N + P+ V   L+   V ++ACG   + A+VD            G+++ 
Sbjct: 180 NSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDT-----------GEVYV 228

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG    G+LG      +  P  V  L      + +CG   T+ LT  G+VY  G+  +GQ
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288

Query: 516 LGNPKAKDRSI---TVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGK 562
           LG     ++S     VVE   K+  ++  +  S H  A  T GG VY WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVE---KDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 16/223 (7%)

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVK--SVACGPWHTAAIVDIMVD 442
           + + ++F  G    G LG G++Q+  +P+ ++SL   K+   S   GP    A  +    
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTE---- 117

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTG 501
                   G++F+WG    G+LG+      L+P+ + T L +    + +CG   ++ LT 
Sbjct: 118 --------GEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G+V+  G    GQ+G+    +++I   V G L+ + V  I+ G      +   G VY W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVW 229

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           G N NGQLGLG S  + TP  V AL+  +V+ V CG + T  +
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 172/395 (43%), Gaps = 51/395 (12%)

Query: 253  PKLLESAVMLD-------VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP 305
            P+L   AV ++       V+ +    +HA +   +G V  WG+   G+LG       + P
Sbjct: 1099 PQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVP 1158

Query: 306  KLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLF 363
              V  L+  +V +VS G + + AL   G ++ WG N  G   D     R+R    P ++ 
Sbjct: 1159 LTVYGLA--SVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTR----PVQVA 1212

Query: 364  DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
               D   V  +  G +H   V + G ++T+G   FG LG G  ++ S P  VE L G  V
Sbjct: 1213 GLGD---VVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEG--V 1267

Query: 424  KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVD 483
             +VA G  ++ A+         S+   G L  WG+   G+LG  DG      + V     
Sbjct: 1268 VAVAGGDHYSLAL--------HSD---GTLSAWGNNASGQLG--DGTGTTRYSRVAVKGV 1314

Query: 484  FDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS 543
               V    G   TV L G G V+T G    GQLG+  +  R   V         V  + +
Sbjct: 1315 DGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGA 1374

Query: 544  GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES----------- 592
            G+ H   +   G+V+TWG+N++GQLGLGD+  R  P  V  L D  V S           
Sbjct: 1375 GARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSDVTVVSGGADFSLAMKR 1434

Query: 593  ----VVCGSSITAAICLHKSISVGDQSSCSQCRMP 623
                +  GSS+  ++ L  +   G +SS  Q  +P
Sbjct: 1435 DGTVLSWGSSLYGSLGLGAT---GHRSSPGQVALP 1466



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 150/341 (43%), Gaps = 28/341 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           +  +  G  HA  + K+G V+ WG    G+LG     D + P  V  L    V++V+  +
Sbjct: 261 ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLE--RVKAVASMD 318

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + AL  +G ++ WG N  G    G+   R+   P    +      V+ V  G  H  +
Sbjct: 319 SDSLALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPGLNA-----VASVVGGAQHALV 373

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT-AAIVDIMVD 442
           +   G L+ +G G  G LGHG  +    P  V  L G  V S+A G +H+ AA+ D    
Sbjct: 374 LRKDGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAG--VTSMATGSFHSLAALGD---- 427

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   G ++ WG    G+LG      +     V  L     V ++    L VG+ G 
Sbjct: 428 --------GSVWAWGRNTYGQLGDGSTAERHAAVRVEGLGGVRSVASAAHHSLAVGMDG- 478

Query: 503 GKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
             V+  G    GQLG+    DR+  V    L    V  +++G  HV  L S GSV+ WG 
Sbjct: 479 -TVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS--VTAVAAGGSHVLALRSDGSVWAWGY 535

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           NA GQLG G + +R TP  V  L    V +V  GS  + A+
Sbjct: 536 NALGQLGDGTTVDRLTPVRVSGL--GAVVAVAAGSYFSMAL 574



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 156/354 (44%), Gaps = 49/354 (13%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMD----VSCPKLVECLSGINVQSV 319
            V  +S+G  H  +V  +G V  WGE   G+LG   +      VS P  V C     V+SV
Sbjct: 761  VDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPG-VPC-----VRSV 814

Query: 320  SCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGE 378
            + G   + AL   G ++ WG N  G   +G+  +     PR     ++G+R V  +A G 
Sbjct: 815  ASGIQHSLALACDGTVWAWGANARGQ--LGDGTTT----PRVTPGLVEGLRGVVALAAGG 868

Query: 379  WHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVD 438
              +  +   G ++++G    G LG G L + + P  VE               H +  V 
Sbjct: 869  DASVALRADGSVWSWGGNASGQLGDGTLTDRALPAHVE---------------HLSNAVA 913

Query: 439  IMVDRCKSNAIG--GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLT 496
            + V    + A+G  G L+ WG    G+LG       L P  V  L     V A  GR  +
Sbjct: 914  VAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLERVASVAA--GRAFS 971

Query: 497  VGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            V +   G  +  G+   GQLG+     RS+      LK   ++ +S+G++HV  L++ G+
Sbjct: 972  VAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKG--IRAMSAGAHHVVALSADGT 1029

Query: 557  VYTWGKNANGQLGLGDSQ-----ERETPTFVEALRDRQVESVVCGSSITAAICL 605
            V+TWG N  GQLG G S       R+ P        R VE+V  G   T A+ L
Sbjct: 1030 VWTWGDNTLGQLGDGSSSPTGMWPRQVPEL------RGVEAVAAGEQFTVAVLL 1077



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 181/446 (40%), Gaps = 102/446 (22%)

Query: 245 KTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           +T +  L P  L  A + ++ ++  G  H+  +  +G V+ WG    G+LG     D + 
Sbjct: 94  ETSLQGLAPVRL--AALENIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRAT 151

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKL-- 362
           P  V  L   +V +V+ G+F + AL + G ++ WG N HG   +G   ++    P ++  
Sbjct: 152 PMRVAGLD--SVVAVAAGDFHSLALREDGTVWAWGTNFHGQ--LGRGHTQPGLTPEQVPG 207

Query: 363 ----------FD-TL----DG-VR-----------------------------VSKVACG 377
                     FD TL    DG VR                             +++V  G
Sbjct: 208 LNGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAG 267

Query: 378 EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
            +H   +   G ++T+G    G LG G   + + P +V  L   +VK+VA     + A++
Sbjct: 268 TYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLE--RVKAVASMDSDSLALL 325

Query: 438 DI------------------MVDRCKS------NAIG---------------GKLFTWGD 458
           D                     DR         NA+                G L+ WG 
Sbjct: 326 DTGAVFAWGANGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKDGTLWAWGG 385

Query: 459 ADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
              G+LGH   ER ++P  V RL        + G   ++   G G V+  G   +GQLG+
Sbjct: 386 GLSGQLGHGGSERHVVPAPVMRLA--GVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGD 443

Query: 519 PKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERE 577
               +R   V VEG      V+ ++S ++H   +   G+V+ WG+NA GQLG G + +R 
Sbjct: 444 GSTAERHAAVRVEGL---GGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRA 500

Query: 578 TPTFVEALRDRQVESVVCGSSITAAI 603
            P  V  L    V +V  G S   A+
Sbjct: 501 RPVAVPGL--TSVTAVAAGGSHVLAL 524



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 27/332 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           I+ G +H+  ++  G+V+ WG    G+LG  + ++    P  +  L   N+ SV  G+  
Sbjct: 63  IAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALE--NIVSVVSGDAH 120

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           + AL   G ++TWG N+ G   +G+  +     P ++   LD   V  VA G++H+  + 
Sbjct: 121 SLALGADGSVWTWGGNSSGQ--LGDGTTTDRATPMRVAG-LD--SVVAVAAGDFHSLALR 175

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G ++ +G    G LG G+ Q    P++V  L G  V ++A G   T A+++       
Sbjct: 176 EDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVLED------ 227

Query: 446 SNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKV 505
                G +  WG    G+LG     ++L P  V+ L     V+A     L +G    G V
Sbjct: 228 -----GTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKD--GGV 280

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           +T GS   GQLG+    DR++ +    L  E VK ++S       L   G+V+ WG N +
Sbjct: 281 WTWGSNASGQLGDGTWNDRAVPMQVPGL--ERVKAVASMDSDSLALLDTGAVFAWGANGS 338

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           GQLG GD+ +R TP  V  L    V SVV G+
Sbjct: 339 GQLGDGDTTDRATPGPVPGL--NAVASVVGGA 368



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 160/368 (43%), Gaps = 32/368 (8%)

Query: 244 NKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVS 303
           + T VD L P  +    +  V  ++ G+  +  +  +G V+ WGEG +G+LG    +   
Sbjct: 543 DGTTVDRLTPVRVSG--LGAVVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRL 600

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            P  VE L+  N+  V+ G     A+   G ++ WG N  G      +     W  R   
Sbjct: 601 SPVRVEGLA--NITRVAAGSAHALAVRGDGTVWAWGDNGEG------QLGDGSWADRFRP 652

Query: 364 DTLDGVR-VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
             + G++ ++ V+ G  H+  +   G +  +G   +G LG G L +  +P  +  L G++
Sbjct: 653 VQVPGLQGITAVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGIQ 712

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
               A  P H   ++ +  D        G L  WG    G+LG        +P  V  + 
Sbjct: 713 ----ALHPSHLH-VLALHAD--------GTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIG 759

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGI 541
             D  + S GR  T+ +   G V   G    GQLG+  +  R+  V V G      V+ +
Sbjct: 760 RVD--RLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGV---PCVRSV 814

Query: 542 SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITA 601
           +SG  H   L   G+V+ WG NA GQLG G +  R TP  VE LR   V ++  G   + 
Sbjct: 815 ASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLRG--VVALAAGGDASV 872

Query: 602 AICLHKSI 609
           A+    S+
Sbjct: 873 ALRADGSV 880



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 142/323 (43%), Gaps = 29/323 (8%)

Query: 264  VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
            V++++ G +H+  +  +G V+ WG    G+LG         P LVE L G  V +++ G 
Sbjct: 811  VRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLRG--VVALAAGG 868

Query: 324  FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
              + AL   G +++WG N  G    G    R+  LP  +    + V    VA GE H   
Sbjct: 869  DASVALRADGSVWSWGGNASGQLGDGTLTDRA--LPAHVEHLSNAV---AVAVGETHALA 923

Query: 384  VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
            V   G L+ +G    G LG G       P  V+ L   +V SVA G   + A+ D     
Sbjct: 924  VGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLE--RVASVAAGRAFSVAVRDD---- 977

Query: 444  CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                   G  + WG    G+LG      + +P  VT L     +  S G    V L+  G
Sbjct: 978  -------GTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKGIRAM--SAGAHHVVALSADG 1028

Query: 504  KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEF--VKGISSG-SYHVAVLTSGGSVYTW 560
             V+T G    GQLG+  +   S T +  +   E   V+ +++G  + VAVL  G +   W
Sbjct: 1029 TVWTWGDNTLGQLGDGSS---SPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDG-TARAW 1084

Query: 561  GKNANGQLGLGDSQERETPTFVE 583
            G N  GQLG G +  + TP  V+
Sbjct: 1085 GSNEYGQLGDGKTGPQLTPMAVK 1107



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 485 DFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSG 544
           + V    G   ++ L   G V+T G    GQLG+    DR+  +    L  + V  +++G
Sbjct: 110 NIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGL--DSVVAVAAG 167

Query: 545 SYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
            +H   L   G+V+ WG N +GQLG G +Q   TP  V  L    V ++  G   T A+ 
Sbjct: 168 DFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVL 225


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 23/279 (8%)

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW----HTAIVS 385
           T + EI+  G N  G   +G+ +S     PR+L D+L G    K+AC  +    H  + +
Sbjct: 132 TVNDEIFVLGTNCCGCLGLGDIQSTIE--PRRL-DSLSG---KKIACFSYGSGPHVILAT 185

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRC 444
           T G++FT+G   +  LG+G   +   P  + + L   +V  VACG +H+  +        
Sbjct: 186 TEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS------ 239

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTR-LVDFDFVQASCGRMLTVGLTGLG 503
                 G++F WG  + G++G      + +P  VT  L +   V  +CG+M +V +   G
Sbjct: 240 -----DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNG 294

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           +VY  G   +GQLG   + ++S       L+   V+ ++ G  H  VLT  G VY WG N
Sbjct: 295 EVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGAN 354

Query: 564 ANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           + GQLG G+   +  PT V   +DR +E   C S+ T+A
Sbjct: 355 SYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA 393



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 16/260 (6%)

Query: 253 PKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVEC- 310
           P+ L+S     +   S G+  H  L T EGE+F WG     +LG+        P  +   
Sbjct: 159 PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN 218

Query: 311 LSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
           LS   V  V+CG + +  LT  GE++ WG+NN G   VG   + +  +PR++   L    
Sbjct: 219 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ--VGSGSTANQPIPRRVTGCLQNKV 276

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           V  +ACG+  +  V  +G+++ +G    G LG G+  N S P  + +L+G+ V+ VACG 
Sbjct: 277 VVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGY 336

Query: 431 WHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQAS 490
            HT  + D            G+++ WG    G+LG  +   +  PT V    D     A+
Sbjct: 337 AHTLVLTD-----------EGQVYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAA 385

Query: 491 CGRMLT-VGLTGLGKVYTMG 509
           C    T    T  G VY  G
Sbjct: 386 CHSTHTSAAKTQGGHVYMWG 405



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 16/288 (5%)

Query: 278 TKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL-TKSGEIY 336
           T   E+F  G    G LG         P+ ++ LSG  +   S G      L T  GEI+
Sbjct: 132 TVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIF 191

Query: 337 TWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDG 396
           TWGHN +    +G   +    +P  +   L   +V +VACG +H+ ++++ G++F +G  
Sbjct: 192 TWGHNAYSQ--LGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN 249

Query: 397 TFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFT 455
             G +G G+  N   P+ V   L+   V ++ACG   + A+VD            G+++ 
Sbjct: 250 NSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVD-----------NGEVYV 298

Query: 456 WGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQ 515
           WG    G+LG      +  P  +  L      + +CG   T+ LT  G+VY  G+  +GQ
Sbjct: 299 WGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQ 358

Query: 516 LGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGK 562
           LG     ++S        K+  ++  +  S H  A  T GG VY WG+
Sbjct: 359 LGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 406



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 31/275 (11%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVE-CLSGINVQSVSCG 322
           V  ++ G+ H+ ++T +GEVF WG    G++G     +   P+ V  CL    V +++CG
Sbjct: 224 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACG 283

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
           +  + A+  +GE+Y WG+N +G   +G   ++S   P ++   L G+ V +VACG  HT 
Sbjct: 284 QMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQS--TPCRI-AALQGICVQRVACGYAHTL 340

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +++  GQ++ +G  ++G LG GN  N S P  V   +   ++  AC   HT+A       
Sbjct: 341 VLTDEGQVYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA------- 393

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLP-----TCVTRLVDFDFVQASCGRMLTV 497
              +   GG ++ W        G   G+  +LP     +C   +       A   R+LTV
Sbjct: 394 ---AKTQGGHVYMW--------GQCRGQSVILPHLTSFSCTDDVFACFATPAVSWRLLTV 442

Query: 498 GLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGK 532
                    T+  ++  +  NP   D    +V+GK
Sbjct: 443 EPD---DHLTVAESLKREFDNPNTADLKF-LVDGK 473



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 385 STSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
           + + ++F  G    G LG G++Q+  +P+ ++SL G   K +AC  + +   V +     
Sbjct: 132 TVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSG---KKIACFSYGSGPHVILATTE- 187

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGLG 503
                 G++FTWG     +LG+      L+P  + T L +   ++ +CG   ++ LT  G
Sbjct: 188 ------GEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 241

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGK 562
           +V+  G    GQ+G+    ++ I   V G L+ + V  I+ G      +   G VY WG 
Sbjct: 242 EVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGY 301

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N NGQLGLG S  + TP  + AL+   V+ V CG + T  +
Sbjct: 302 NGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVL 342


>gi|219116638|ref|XP_002179114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409881|gb|EEC49812.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1312

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 148/326 (45%), Gaps = 23/326 (7%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S  + H  ++T+ G V+ +G GK GRLG       + P  V  LS   V  +S  E  
Sbjct: 336 SVSAASHHTLVLTRNGHVYAFGLGKGGRLGTGDESHCALPTRVVGLSHHKVVGISAAESH 395

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           +  +TK+G ++ WG N  G   +      +  +PR++ D L   +   VA G  H+  +S
Sbjct: 396 SLCVTKTGIVFAWGSNRFGQLGLTLDDCSTRSVPRRI-DNLKNTQCVAVAAGAKHSVALS 454

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA---CGPWHTAAIVDIMVD 442
             G++F +GD T G LG        +   VE+L G     VA   C    T  ++ +   
Sbjct: 455 RIGEVFVWGDNTAGQLGVSRRNGTHRVHRVEALWGTSPPKVAMSICASEKTTLVLTLPWG 514

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
           R  +      ++TWG  +     HV  + +L P+  TR    + V  +C R   V ++  
Sbjct: 515 R--TGVPVNSIYTWGHGN-----HVPSKIQLNPSVETRNRLVNPVSIACARFHNVVVSSD 567

Query: 503 GKVYTMGSAVHGQ-LGNPKAKDRSIT-----VVEGKLKEE---FVKGISSGSYHVAVLTS 553
           G VYT G  +H + LG P +  +        +V+G L         G+S+   H AV+T 
Sbjct: 568 GLVYTWG--LHAESLGTPVSAKKGTAMAVPQLVQGMLPHNGGGVAVGVSASENHTAVITD 625

Query: 554 GGSVYTWGKNANGQLGLGDSQERETP 579
            G++YTWG  A G+  LG    R  P
Sbjct: 626 TGALYTWGA-AYGKDVLGHEGIRWQP 650



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 109/273 (39%), Gaps = 61/273 (22%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V  WG    G  +G  +D   +++       +P+ +++        ++ GAKH+  +++ 
Sbjct: 405 VFAWGSNRFG-QLGLTLDDCSTRS-------VPRRIDNLKNTQCVAVAAGAKHSVALSRI 456

Query: 281 GEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGIN----VQSVSCGEFQTCALT----KS 332
           GEVF WG+   G+LG            VE L G +      S+   E  T  LT    ++
Sbjct: 457 GEVFVWGDNTAGQLGVSRRNGTHRVHRVEALWGTSPPKVAMSICASEKTTLVLTLPWGRT 516

Query: 333 G----EIYTWGHNNHGADLVG-----ERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           G     IYTWGH NH    +      E R+R              V    +AC  +H  +
Sbjct: 517 GVPVNSIYTWGHGNHVPSKIQLNPSVETRNRL-------------VNPVSIACARFHNVV 563

Query: 384 VSTSGQLFTYG-----DGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACG----PWHTA 434
           VS+ G ++T+G      GT      G    V  P+ V+ +       VA G      HTA
Sbjct: 564 VSSDGLVYTWGLHAESLGTPVSAKKGTAMAV--PQLVQGMLPHNGGGVAVGVSASENHTA 621

Query: 435 AIVDIMVDRCKSNAIGGKLFTWGDA-DKGRLGH 466
            I D            G L+TWG A  K  LGH
Sbjct: 622 VITDT-----------GALYTWGAAYGKDVLGH 643



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 110/271 (40%), Gaps = 44/271 (16%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVN--MDVSCPKLVECLSGINVQSVSC 321
           V  IS    H+  VTK G VF WG  + G+LG  ++     S P+ ++ L      +V+ 
Sbjct: 386 VVGISAAESHSLCVTKTGIVFAWGSNRFGQLGLTLDDCSTRSVPRRIDNLKNTQCVAVAA 445

Query: 322 GEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVA---CGE 378
           G   + AL++ GE++ WG N  G  L   RR+ +H + R   + L G    KVA   C  
Sbjct: 446 GAKHSVALSRIGEVFVWGDNTAG-QLGVSRRNGTHRVHR--VEALWGTSPPKVAMSICAS 502

Query: 379 WHTAIVSTSGQLFTYGDGTFGV-------LGHGN--LQNVSQPKEVESL-RGLKVKSVAC 428
             T +V       T   G  GV        GHGN     +     VE+  R +   S+AC
Sbjct: 503 EKTTLV------LTLPWGRTGVPVNSIYTWGHGNHVPSKIQLNPSVETRNRLVNPVSIAC 556

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF-- 486
             +H   +           +  G ++TWG   +  LG     +K     V +LV      
Sbjct: 557 ARFHNVVV-----------SSDGLVYTWGLHAES-LGTPVSAKKGTAMAVPQLVQGMLPH 604

Query: 487 ------VQASCGRMLTVGLTGLGKVYTMGSA 511
                 V  S     T  +T  G +YT G+A
Sbjct: 605 NGGGVAVGVSASENHTAVITDTGALYTWGAA 635



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 5/158 (3%)

Query: 451 GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGS 510
           G ++ +G    GRLG  D     LPT V  L     V  S     ++ +T  G V+  GS
Sbjct: 351 GHVYAFGLGKGGRLGTGDESHCALPTRVVGLSHHKVVGISAAESHSLCVTKTGIVFAWGS 410

Query: 511 AVHGQLGNP--KAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
              GQLG        RS+      LK      +++G+ H   L+  G V+ WG N  GQL
Sbjct: 411 NRFGQLGLTLDDCSTRSVPRRIDNLKNTQCVAVAAGAKHSVALSRIGEVFVWGDNTAGQL 470

Query: 569 GLGDSQERETPTFVEAL---RDRQVESVVCGSSITAAI 603
           G+           VEAL      +V   +C S  T  +
Sbjct: 471 GVSRRNGTHRVHRVEALWGTSPPKVAMSICASEKTTLV 508



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  S     T+ LT  G VY  G    G+LG       ++      L    V GIS+   
Sbjct: 335 VSVSAASHHTLVLTRNGHVYAFGLGKGGRLGTGDESHCALPTRVVGLSHHKVVGISAAES 394

Query: 547 HVAVLTSGGSVYTWGKNANGQLG--LGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           H   +T  G V+ WG N  GQLG  L D   R  P  ++ L++ Q  +V  G+  + A+
Sbjct: 395 HSLCVTKTGIVFAWGSNRFGQLGLTLDDCSTRSVPRRIDNLKNTQCVAVAAGAKHSVAL 453



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 541 ISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSIT 600
           +S+ S+H  VLT  G VY +G    G+LG GD      PT V  L   +V  +    S  
Sbjct: 337 VSAASHHTLVLTRNGHVYAFGLGKGGRLGTGDESHCALPTRVVGLSHHKVVGISAAES-- 394

Query: 601 AAICLHKS 608
            ++C+ K+
Sbjct: 395 HSLCVTKT 402


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 22/322 (6%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H AL+T   +++ +G    G+LG      V+ P  V+ L    V+  +CG   T
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T+ G++Y  G N+ G   +G+   R+ +     F      ++ +++ G   +A ++ 
Sbjct: 100 LVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQH--KIKQLSAGSNTSAALTE 157

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G LF +GD + G +G     NV  P EV    G  +  ++CG +H+A +          
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEV--TIGKPISWISCGYYHSAFVT--------- 206

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERK--LLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G+L+T+G+ + G+LG    + K   +P  V   +     Q +CG   TV LT   +
Sbjct: 207 --TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLG-IPGKVNQVACGGGHTVALTE-EE 262

Query: 505 VYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
           VYT G    GQLG      + S   V   L+ + ++ I+ G  H A+++  G +YT+G  
Sbjct: 263 VYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDG 322

Query: 564 ANGQLGLGDSQERETPTFVEAL 585
            +G+LGLG  QE  T  FV  L
Sbjct: 323 RHGKLGLG--QENFTNQFVPTL 342



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 38/288 (13%)

Query: 332 SGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLF 391
           SG ++T+G +    ++         WL   +         + ++CG+ HTA+++ + +L+
Sbjct: 11  SGAVFTFGKSKFAENI-----PSKFWLKNDI--------PAYLSCGDEHTALITGNSKLY 57

Query: 392 TYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGG 451
            +G   +G LG G+   V++P  V++L+  KVK  ACG  HT    +            G
Sbjct: 58  MFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTE-----------EG 106

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDF-----DFVQASCGRMLTVGLTGLGKVY 506
           K++  G   +G+LG  D E +       +LV F        Q S G   +  LT  G ++
Sbjct: 107 KVYAAGGNSEGQLGLGDTEER----TTFQLVSFFTAQHKIKQLSAGSNTSAALTEDGVLF 162

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANG 566
             G    GQ+G   A++ ++ V       + +  IS G YH A +T+ G +YT+G+  NG
Sbjct: 163 MWGDNSEGQIG--LAEEANVCVPSEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENG 220

Query: 567 QLGLGDSQ--ERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVG 612
           +LGL   Q      P  V  +  + V  V CG   T A+   +  + G
Sbjct: 221 KLGLSPEQLKNHRIPQLVLGIPGK-VNQVACGGGHTVALTEEEVYTFG 267


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 21/284 (7%)

Query: 195 PKNESHRLVTPTYGSPLIERKDILKDVMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPK 254
           PK  S+  +   YG    E   + KD M++G       IG    G +    T    + PK
Sbjct: 20  PKFISNVRMAIVYGKAANETLIVTKDDMVYG-------IGNNTYGCLGTGDTH-STIYPK 71

Query: 255 LLESAVMLDVQNISLG-AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV-ECLS 312
            +E+     V+  + G   H   +T+EG+V+ WG      LG++   +   P L+   L+
Sbjct: 72  KIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALN 131

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V  ++CG   + ALT  GE+Y WGHN  G    G   S    +P+ L   L+G +V 
Sbjct: 132 NEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVV 191

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
            ++CG+  +  V+ +G+++++G    G LG GN  + ++P++V +   + ++ V CG  H
Sbjct: 192 HISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMH 251

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           T A+ D            G L+ WG    G+LG        +PT
Sbjct: 252 TLALSD-----------EGDLYVWGANSYGQLGLNTDSNVWIPT 284



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 27/351 (7%)

Query: 243 QNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDV 302
           +N +    L PK + +  M  V   +  A    +VTK+  V+  G    G LG       
Sbjct: 10  KNWSIFSLLEPKFISNVRMAIVYGKA--ANETLIVTKDDMVYGIGNNTYGCLGTGDTHST 67

Query: 303 SCPKLVECLSGINVQSVSCGEF-QTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRK 361
             PK +E L G +V++ + G+     ALT+ G++Y+WG+N++    +G R +     P  
Sbjct: 68  IYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE--LGNRSTNEGLTPTL 125

Query: 362 LFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP--KEVE-SL 418
           +   L+   V  +ACG  H+  ++  G+++ +G    G +G G + +  QP  K +   L
Sbjct: 126 IPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVL 185

Query: 419 RGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV 478
            G KV  ++CG   + A+ D            G++++WG    G+LG  +   +  P  V
Sbjct: 186 NGKKVVHISCGDSSSVAVTD-----------NGEVYSWGHNGVGQLGIGNCTSQAEPQKV 234

Query: 479 TRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEF 537
                    +  CG M T+ L+  G +Y  G+  +GQLG N  +     T ++       
Sbjct: 235 ATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVPEMGRI 294

Query: 538 VKGISSGSYHVAV-LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
           +   +S  +H+++ ++ G  ++ WG+       LG S +  T T ++ L D
Sbjct: 295 LDIATSHYHHISLAMSEGNRIFMWGQ------CLGQSIKVPTLTPLKCLYD 339



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 26/233 (11%)

Query: 381 TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW-HTAAIVDI 439
           T IV+    ++  G+ T+G LG G+  +   PK++E+L G  VK+ A G   H  A+ + 
Sbjct: 39  TLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTE- 97

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV-QASCGRMLTVG 498
                      GK+++WG  D   LG+      L PT +   ++ +FV   +CG   ++ 
Sbjct: 98  ----------EGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLA 147

Query: 499 LTGLGKVYTMGSAVHGQLG--------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAV 550
           LT  G+VY  G  V GQ+G         P  K   I V+ GK     V  IS G      
Sbjct: 148 LTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHI-VLNGKK----VVHISCGDSSSVA 202

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           +T  G VY+WG N  GQLG+G+   +  P  V       +E VVCG   T A+
Sbjct: 203 VTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLAL 255


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 41/354 (11%)

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNH----------GADLVGERRSR 354
           PK V  L+G  +  V+CG      LT +G++Y++G N             A+      +R
Sbjct: 488 PKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADNDYTR 547

Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
           S      L   L    ++ ++CG  H+  ++ +G+L+T+G G  G LGHG++++ + P++
Sbjct: 548 SISKELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRK 607

Query: 415 VESLRGLKVKSVACG----PWHTAA--IVDIMVDRCKSNAI-----------GGKLFTWG 457
           V SL    V S +CG     W      IV        SN +            G +FTWG
Sbjct: 608 VMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWG 667

Query: 458 DADKGR--LGHVDGERKLLPTCVTRLVDF----DFVQASCGRMLTVGLTGLGKVYTMGSA 511
              +G+  LG+VD + +++P CV +L +       V  +CG   TV LT  G++Y+ G  
Sbjct: 668 KTGEGQCGLGYVDKD-QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLG 726

Query: 512 VHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLG 571
            +GQL   +    ++   +   +      +  G++H    T    ++ WG N+ G  GLG
Sbjct: 727 EYGQLARVQLPSDALCAPDQLTR------VYCGAFHSIATTEKRVMFAWGLNSYGACGLG 780

Query: 572 DSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQCRMPFG 625
            +  ++ P  ++    +    V CG   T A+ +  ++  G  SS S   +  G
Sbjct: 781 HTANKDKPERIDCFSSQTELVVACGHKYTIALEVDPAL-YGHSSSSSHAMVRTG 833



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 53/269 (19%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL------------ 311
           +  IS GA+H+  +T  GE++ WG G+DGRLGH    D + P+ V  L            
Sbjct: 564 IAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCGL 623

Query: 312 ----------------SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRS 355
                            G  + +V CG   T AL + G I+TWG    G   +G    + 
Sbjct: 624 GDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLG-YVDKD 682

Query: 356 HWLPR---KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQP 412
             +PR   KL +   G     VACG  HT +++ SG+L+++G G +     G L  V  P
Sbjct: 683 QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLGEY-----GQLARVQLP 737

Query: 413 KEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGR--LGHVDGE 470
            +       ++  V CG +H+ A  +  V           +F WG    G   LGH   +
Sbjct: 738 SDALCAPD-QLTRVYCGAFHSIATTEKRV-----------MFAWGLNSYGACGLGHTANK 785

Query: 471 RKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
            K  P  +        +  +CG   T+ L
Sbjct: 786 DK--PERIDCFSSQTELVVACGHKYTIAL 812



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 120/322 (37%), Gaps = 81/322 (25%)

Query: 409 VSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV- 467
           V +PK+V  L G  +  VACG  H   +              G ++++GD +  +   V 
Sbjct: 485 VLRPKQVSLLNGQPIVQVACGGEHLLYLTST-----------GDVYSYGDNEDKKAAAVT 533

Query: 468 ----------DGERKL-----LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
                     D  R +     L   + R         SCG   ++ +T  G++YT GS  
Sbjct: 534 IATNANSADNDYTRSISKELALEKALHRTT---IAMISCGAQHSLAITDAGELYTWGSGE 590

Query: 513 HGQLGNPKAKDRSITVVEGKLKEEFVKGISSG--------SYH----------------- 547
            G+LG+   +DR++      L  E V   S G        + H                 
Sbjct: 591 DGRLGHGDMRDRAVPRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCG 650

Query: 548 ---VAVLTSGGSVYTWGKNANGQLGLGD-SQERETPTFVEALRDRQVES----VVCGSSI 599
               A L   G+++TWGK   GQ GLG   +++  P  VE LR+    S    V CG + 
Sbjct: 651 WNFTAALDRQGNIFTWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAGSAAVDVACGYTH 710

Query: 600 TAAICLH---KSISVGDQSSCSQCRMP---FGFRRKKHNCYNCGLHFCSACSTKKIINA- 652
           T  +       S  +G+    ++ ++P        +    Y CG     A + K+++ A 
Sbjct: 711 TVVLTASGELYSWGLGEYGQLARVQLPSDALCAPDQLTRVY-CGAFHSIATTEKRVMFAW 769

Query: 653 ----------SLTPNKGKPSRV 664
                       T NK KP R+
Sbjct: 770 GLNSYGACGLGHTANKDKPERI 791



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
           KL E A      +++ G  H  ++T  GE++ WG G+ G+L       V  P    C   
Sbjct: 691 KLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLGEYGQLAR-----VQLPSDALCAPD 745

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             +  V CG F + A T+   ++ WG N++GA  +G   ++    P ++ D         
Sbjct: 746 -QLTRVYCGAFHSIATTEKRVMFAWGLNSYGACGLGHTANKDK--PERI-DCFSSQTELV 801

Query: 374 VACGEWHTAIVSTSGQLF 391
           VACG  +T  +     L+
Sbjct: 802 VACGHKYTIALEVDPALY 819


>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
           guttata]
          Length = 537

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 134/295 (45%), Gaps = 16/295 (5%)

Query: 271 AKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCAL- 329
           A  A  +T   EVF +G      LG   N     PK +E L G  + S+S G      L 
Sbjct: 37  ANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLC 96

Query: 330 TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQ 389
           T+ GE+Y WGHN  G   +G   +     P ++   L   +V +VACG  H+  +S  G 
Sbjct: 97  TEDGEVYAWGHN--GYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGD 154

Query: 390 LFTYGDGTFGVLGHGNLQNVSQPKEVES-LRGLKVKSVACGPWHTAAIVDIMVDRCKSNA 448
           L+ +G    G +G G+  N   P+ V + L+G  V  +ACG   + A+V+          
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVN---------- 204

Query: 449 IGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTM 508
             G+++ WG    G+LG  +   +L P  V  L     +Q +CG   T+ LT  G +Y  
Sbjct: 205 -NGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAW 263

Query: 509 GSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHV-AVLTSGGSVYTWGK 562
           G+  +GQLG     ++   V     KE  V+  +  S H  A  T  G VY WG+
Sbjct: 264 GANTYGQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ 318



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 15/228 (6%)

Query: 251 LLPKLLESAVMLDVQNISLGA-KHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSCPKLV 308
           ++PK LE+     + ++S G+  H  L T++GEV+ WG     +LG+   N  ++  ++ 
Sbjct: 69  IVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC 128

Query: 309 ECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDG 368
             L    V  V+CG   + AL+  G++Y WG+NN G   VG   + +   PR++ + L G
Sbjct: 129 TNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQ--VGSGSTANQPTPRRVSNCLQG 186

Query: 369 VRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVAC 428
             V  +ACG+  +  V  +G+++ +G    G LG GN  N   P  V +L  + V  +AC
Sbjct: 187 KIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIAC 246

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
           G  HT A+ D            G L+ WG    G+LG  +   +L P 
Sbjct: 247 GYAHTLALTD-----------EGLLYAWGANTYGQLGTGNKSNQLSPV 283



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 17/277 (6%)

Query: 329 LTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVSTS 387
           +T S E++ +G N   ++ +G   ++S  +P+KL + L G ++S ++ G   H  + +  
Sbjct: 43  ITHSDEVFVFGLN--CSNCLGTGDNQSTIVPKKL-EALCGKKISSLSYGSGPHVVLCTED 99

Query: 388 GQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
           G+++ +G   +  LG+G       P +V  +L   KV  VACG  H+ A+          
Sbjct: 100 GEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMAL---------- 149

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQA-SCGRMLTVGLTGLGKV 505
            ++ G L+ WG  + G++G      +  P  V+  +    V   +CG+  ++ +   G+V
Sbjct: 150 -SMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEV 208

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  G   +GQLG     ++        L    V  I+ G  H   LT  G +Y WG N  
Sbjct: 209 YGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTY 268

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
           GQLG G+   + +P  +   ++R VE   C S+ T+A
Sbjct: 269 GQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSA 305



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 12/222 (5%)

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           ++ S ++F +G      LG G+ Q+   PK++E+L G K+ S++ G           V  
Sbjct: 43  ITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGS-------GPHVVL 95

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCV-TRLVDFDFVQASCGRMLTVGLTGL 502
           C  +   G+++ WG     +LG+    + + P  V T L+    V+ +CG   ++ L+  
Sbjct: 96  CTED---GEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMD 152

Query: 503 GKVYTMGSAVHGQLGN-PKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           G +Y  G    GQ+G+   A   +   V   L+ + V GI+ G      + + G VY WG
Sbjct: 153 GDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWG 212

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            N NGQLGLG++  + TP  V AL    V  + CG + T A+
Sbjct: 213 YNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLAL 254



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  I+ G   +  V   GEV+ WG   +G+LG   N +   P  V  L  + V  ++CG 
Sbjct: 189 VVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGY 248

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKV-ACGEWHTA 382
             T ALT  G +Y WG N +G   +G     +   P ++   ++  RV ++ AC   HT+
Sbjct: 249 AHTLALTDEGLLYAWGANTYGQ--LGTGNKSNQLSPVQIM--MEKERVVEIAACHSAHTS 304

Query: 383 IVST-SGQLFTYG 394
              T SGQ++ +G
Sbjct: 305 AAKTQSGQVYMWG 317


>gi|302820496|ref|XP_002991915.1| hypothetical protein SELMODRAFT_430200 [Selaginella moellendorffii]
 gi|300140301|gb|EFJ07026.1| hypothetical protein SELMODRAFT_430200 [Selaginella moellendorffii]
          Length = 253

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 13/176 (7%)

Query: 2   DEKFLIWYSGQKEKQLRLNSVTKIIMGQRTVNFQCQPQPDRKQQSFSIIYANGERSLDLI 61
           DE  LIWYSG++EK LRL+S+T+I+ GQRT NFQ  P+ +++ QSFS+IY N +RSLDLI
Sbjct: 39  DETHLIWYSGKEEKSLRLSSITRIVPGQRTANFQRYPRLEKEYQSFSLIYGN-DRSLDLI 97

Query: 62  CKDKVQAESWFLGLRAAISSCRRSRTFSCLREKRGVQSCVSSPASYIRRKH------NLG 115
           CKDK +AE WF+GL+A +S  + SR     R + G  S  +SPA++ R         N+ 
Sbjct: 98  CKDKDEAEVWFVGLKALVSGGQLSRLRFDSRSECGPPSDSNSPATWSRISPASSPFGNVD 157

Query: 116 LL--EDATELSQVRSLCGSPS-LSLSERCFSDG---LSYSSDSFYSSESSSSQIQN 165
            L  +D  E  + +S  GSP   +L +R FS G   L  SS  F  + S++  + +
Sbjct: 158 NLPRQDGREAFRFQSPYGSPPRYALQQRSFSPGAPSLDSSSKLFLENASTAGSLHS 213


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 154/342 (45%), Gaps = 30/342 (8%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V  ++ G  HA  +  +G V+ WG    G++G     D   P  V  ++    ++V+  +
Sbjct: 251 VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIA--RAKAVAAQD 308

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             +  L   G ++ WG N+ G   +G        LP ++        V+ +A G  H  +
Sbjct: 309 AGSLVLLDDGGVFAWGLNSQGQLGIGTTADSP--LPVRVRGL---GAVTSLAAGTQHAVV 363

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT-AAIVDIMVD 442
           +   G L+T+G G  G LGHG+ + +  P+ V  L    V SVA G +H+ AA+ D    
Sbjct: 364 LRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLS--NVASVASGSFHSVAALSD---- 417

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGL 502
                   G ++TWG    G+LG      + LP  V  L     V AS        L   
Sbjct: 418 --------GSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSGVVSVSASGHHSFA--LRSD 467

Query: 503 GKVYTMGSAVHGQLGNPKAKDR-SITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWG 561
           G V+  G    GQ+G+   KDR S   VEG      VK ++SG  H+  L + G+V+TWG
Sbjct: 468 GTVWGWGRNAQGQMGDGTTKDRASPARVEGL---SSVKALASGGSHMVALRTDGTVWTWG 524

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            N  GQLG G + +R  P  V  L    V SV  G+  + A+
Sbjct: 525 YNGAGQLGDGTTTDRRAPVQVTGLSG--VTSVAAGAYFSLAL 564



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 158/351 (45%), Gaps = 32/351 (9%)

Query: 254  KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
            KL  S V++   ++S   +HAA +  +G V  WG   DG+LG       + P  V  L  
Sbjct: 1096 KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLGA 1155

Query: 314  INVQSVSCGEFQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDGVRV 371
            +   +V+     T AL   G ++ WG N  G   D    RR+    LP ++   L+  +V
Sbjct: 1156 M--VAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRRT----LPVQVVG-LE--KV 1206

Query: 372  SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            + +A G +H+  V   G ++ +G   FG LG G +   + P  +  L G    +VA G +
Sbjct: 1207 TAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDG--AVAVAGGEY 1264

Query: 432  HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
            H+      ++ R       G L+  G+   G+LG      +L P  V  L     V+A  
Sbjct: 1265 HS------LMLRFD-----GTLWATGNNSHGQLGEGTFTNRLSPFQVVELDQVRTVRA-- 1311

Query: 492  GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVL 551
            G   +V L   G V+T G    GQLG+     R +      L    +  + +G+ H    
Sbjct: 1312 GGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLTA--IASVGAGTSHT--F 1367

Query: 552  TSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAA 602
              G   + WG+N++GQLG GDS +R  PT V+ L    V+SV+ G   + A
Sbjct: 1368 AVGSETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHG--VKSVLAGGDFSVA 1416



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 156/356 (43%), Gaps = 43/356 (12%)

Query: 234  GGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGR 293
            GG  DG +    T+  A    +     M+ V      A+H   +  +G V+ WG+   G+
Sbjct: 1129 GGNADGQLGDGTTESRATPITVAGLGAMVAVAPA---ARHTLALRSDGTVWAWGDNTFGQ 1185

Query: 294  LGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRS 353
            LG   N   + P  V  L    V +++ G + + A+ + G ++ WG+N  G    G   +
Sbjct: 1186 LGDGSNTRRTLPVQVVGLE--KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA 1243

Query: 354  RSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPK 413
            R+  +P ++   LDG     VA GE+H+ ++   G L+  G+ + G LG G   N   P 
Sbjct: 1244 RA--VPTRMLG-LDGA--VAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPF 1298

Query: 414  EVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKL 473
            +V  L   +V++V  G +H+ A+ +            G ++TWG   +G+LG      + 
Sbjct: 1299 QVVELD--QVRTVRAGGYHSVALRED-----------GTVWTWGHNGQGQLGDGTVTTRR 1345

Query: 474  LPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKL 533
            +P  V  L     V A       VG     + +  G   HGQLG   + DR        L
Sbjct: 1346 VPAPVPGLTAIASVGAGTSHTFAVG----SETWAWGRNSHGQLGTGDSSDR--------L 1393

Query: 534  KEEFVKGI-------SSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            +   VKG+       + G + VA   + GS  +WG N +G LG+G   +R  P  V
Sbjct: 1394 EPTLVKGLHGVKSVLAGGDFSVA-QGADGSAMSWGTNVHGTLGIGLPGQRTVPGAV 1448



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 158/347 (45%), Gaps = 29/347 (8%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG-HKVNMDVSCPKLVECL 311
           P     A+      ++ GA+H+  VT+ G V+ WG    G+LG   V+      + V  L
Sbjct: 39  PAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGL 98

Query: 312 SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
           +  +V S++ G+  + AL     ++TWG NN G   VG+  +     P+K+    D   V
Sbjct: 99  T--DVTSIAAGDAHSLALRADRTVWTWGGNNAGQ--VGDGTNVDRPTPQKVPGLSD---V 151

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
             VA GE+H+  +   G ++ +G   +G LG G+ Q    P +V  L G  V ++A G  
Sbjct: 152 VAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTG--VVALAAG-- 207

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASC 491
                 D  +   +S+   G ++ WG    G+LG     ++L PT V++L     V A  
Sbjct: 208 -----FDFSL-AVRSD---GTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAVTAGL 258

Query: 492 GRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAV 550
              L   L   G V+  GS   GQ+G+    DR   V V    + + V    +GS    V
Sbjct: 259 YHALA--LRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSL---V 313

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           L   G V+ WG N+ GQLG+G + +   P  V  L    V S+  G+
Sbjct: 314 LLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGL--GAVTSLAAGT 358



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 158/362 (43%), Gaps = 35/362 (9%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
           + DV +I+ G  H+  +  +  V+ WG    G++G   N+D   P+ V  LS  +V +V+
Sbjct: 98  LTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLS--DVVAVA 155

Query: 321 CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR-VSKVACGEW 379
            GEF + AL   G ++ WG N +G      +  R H  P      + G+  V  +A G  
Sbjct: 156 AGEFHSLALRADGTVWAWGSNFYG------QLGRGHSQPGPSPAQVVGLTGVVALAAGFD 209

Query: 380 HTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDI 439
            +  V + G ++ +G    G LG G       P +V  L+G  V +V  G +H  A+   
Sbjct: 210 FSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQG--VSAVTAGLYHALAL--- 264

Query: 440 MVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGL 499
                +S+   G ++ WG    G++G      +  P  VT +     V A     L   L
Sbjct: 265 -----RSD---GTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLV--L 314

Query: 500 TGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYT 559
              G V+  G    GQLG     D  + V    L    V  +++G+ H  VL + G+++T
Sbjct: 315 LDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLGA--VTSLAAGTQHAVVLRADGTLWT 372

Query: 560 WGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
           WG  A GQLG G S+   +P  V  L +  V SV  GS        H   ++ D S  + 
Sbjct: 373 WGHGATGQLGHGSSERMLSPEVVTRLSN--VASVASGS-------FHSVAALSDGSVWTW 423

Query: 620 CR 621
            R
Sbjct: 424 GR 425



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 154/349 (44%), Gaps = 33/349 (9%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG---INVQ 317
            +L+    S G +H+  +  +     WG  + G+LG   +     P  V+  S    +   
Sbjct: 1048 LLNAVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAV 1107

Query: 318  SVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACG 377
            SVS       AL   G + TWG N  G   +G+  + S   P  +      V V+  A  
Sbjct: 1108 SVSAWHQHAAALLADGTVQTWGGNADGQ--LGDGTTESRATPITVAGLGAMVAVAPAAR- 1164

Query: 378  EWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV 437
              HT  + + G ++ +GD TFG LG G+    + P +V  L   KV ++A G +H+ A+ 
Sbjct: 1165 --HTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLE--KVTAIAAGSYHSLAVR 1220

Query: 438  DIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FVQASCGRMLT 496
            +            G ++ WG    G+LG    + + +PT   R++  D  V  + G   +
Sbjct: 1221 ED-----------GTVWAWGYNVFGQLGDGTMDARAVPT---RMLGLDGAVAVAGGEYHS 1266

Query: 497  VGLTGLGKVYTMGSAVHGQLGNPKAKDR--SITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            + L   G ++  G+  HGQLG     +R     VVE     + V+ + +G YH   L   
Sbjct: 1267 LMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVE----LDQVRTVRAGGYHSVALRED 1322

Query: 555  GSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            G+V+TWG N  GQLG G    R  P  V  L    + SV  G+S T A+
Sbjct: 1323 GTVWTWGHNGQGQLGDGTVTTRRVPAPVPGL--TAIASVGAGTSHTFAV 1369



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 27/329 (8%)

Query: 261  MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVS 320
            +  V  +  G   + ++  +G V+ WG    G+LG     D + P  V+ L+GI    + 
Sbjct: 848  LWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVM- 906

Query: 321  CGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWH 380
             GE     +++ G ++ WG N  G   +G+  + S   P ++      + VS    G+ +
Sbjct: 907  -GEAHALVVSQDGTVWAWGANGRGQ--LGDGTTTSSASPVRVAGLSAAMNVS---VGQAY 960

Query: 381  TAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIM 440
            +  V   G ++++G    G LG G     + PK V+ L    VK+V  G  H   +V + 
Sbjct: 961  SLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLA--DVKAVTAGAHH---VVAVR 1015

Query: 441  VDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLT 500
             D        G ++ WG    G++G      +  P  V  L   + V+ S G   ++ L 
Sbjct: 1016 HD--------GTVWGWGANAFGQVGDGTHFWRFRPVRVEGL--LNAVETSAGEQHSLALL 1065

Query: 501  GLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEE--FVKGISSGSYH--VAVLTSGGS 556
            G  +  + GS  +GQLG+ ++   S+  V  KL      V  +S  ++H   A L + G+
Sbjct: 1066 GDERALSWGSHEYGQLGDAESGP-SLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGT 1124

Query: 557  VYTWGKNANGQLGLGDSQERETPTFVEAL 585
            V TWG NA+GQLG G ++ R TP  V  L
Sbjct: 1125 VQTWGGNADGQLGDGTTESRATPITVAGL 1153



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 145/363 (39%), Gaps = 56/363 (15%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V+ ++ G  H   +  +G V+ WG    G+LG     D   P  V  LSG+   SV+ G 
Sbjct: 501 VKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVT--SVAAGA 558

Query: 324 FQTCALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHT 381
           + + AL   G ++ WG    G   D  G +R+     P ++       RV K+A G  H 
Sbjct: 559 YFSLALRTDGTVWAWGDGFEGQLGDGAGVQRAS----PVQVTGL---TRVVKLAAGAAHG 611

Query: 382 AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIV-DIM 440
             V   G ++ +GD T G +G G+  +  +  +V  L G  V SV  G +H+ A+  D  
Sbjct: 612 LAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGT 669

Query: 441 VDRCKSNAIG--------------------------------------GKLFTWGDADKG 462
           +     NA G                                      G L TWG    G
Sbjct: 670 LRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFG 729

Query: 463 RLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAK 522
           +LG        LP  V  L      + S GR  ++ +   G V   G    GQLG+    
Sbjct: 730 QLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTT 787

Query: 523 DRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFV 582
            R+  V+   L     +  S+G  H  VL   G+V++WG N+ GQLG G    R  P  V
Sbjct: 788 HRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKV 845

Query: 583 EAL 585
           E L
Sbjct: 846 EGL 848



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 153/356 (42%), Gaps = 28/356 (7%)

Query: 250  ALLPKLLESAV--MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKL 307
             + P+++  AV  +  ++ +     H   V ++G +  WG  + G+LG       S P  
Sbjct: 685  GVTPRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQ 744

Query: 308  VECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLD 367
            V  L     + +S G   +  +   G +  WG N  G   +G+  S +H     L   L 
Sbjct: 745  VRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQ--LGDG-STTHRASPVLARNLP 799

Query: 368  GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
              R +  + G  H+ +++  G ++++G  + G LG G + + + P +VE L G+ V  +A
Sbjct: 800  CARAA--SAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGV-VAVLA 856

Query: 428  CGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFV 487
             G          MV R       G ++TWG    G+LG      +  P  V  L      
Sbjct: 857  GGD-------SSMVLRAD-----GTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGI--A 902

Query: 488  QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYH 547
                G    + ++  G V+  G+   GQLG+      +  V    L       +   +Y 
Sbjct: 903  TGVMGEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAGLSAAMNVSVGQ-AYS 961

Query: 548  VAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            +AVL  G +V++WG N +GQLG G +  R TP  V+ L D  V++V  G+    A+
Sbjct: 962  LAVLPDG-TVWSWGANDSGQLGDGTNVARTTPKPVQDLAD--VKAVTAGAHHVVAV 1014


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 146/325 (44%), Gaps = 34/325 (10%)

Query: 261 MLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-----KVNMDVSCPKLVEC---LS 312
            L ++ I+ G  H+ ++  +G VF  G     +LGH     K N+  +    ++      
Sbjct: 51  FLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFV 110

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHG------ADLVGERRSRSHWLPRKLFDTL 366
           GI+V SV+CG+    ALT  G +++WG N +G       ++V + R      PR     +
Sbjct: 111 GIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKAR-----YPR--IQEI 163

Query: 367 DGVRVSKVACGEWHT-AIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKS 425
           +   + ++ACG  H+ A+ ST G L  +G    G LG G  ++   P  V  L G+ +  
Sbjct: 164 NLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQ 223

Query: 426 VACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD 485
           +A G  H+  +              G +F WG    G++G  +    L P+ V  L    
Sbjct: 224 LAAGASHSLVLTP-----------SGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQK 272

Query: 486 FVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGS 545
            ++ +CG   +V +T  G ++T G+  +GQLG+             +L    V  ++ G 
Sbjct: 273 VIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGR 332

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGL 570
            H   +T    +Y +G N +GQLGL
Sbjct: 333 CHTLAITEN-KLYAFGLNTSGQLGL 356



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 20/265 (7%)

Query: 257 ESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLG---HKVNMDVSCPKLVECLSG 313
           +S V + V +++ G  H   +T +G +F WG    G+LG     V      P++ E ++ 
Sbjct: 107 QSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQE-INL 165

Query: 314 INVQSVSCGEFQTCAL-TKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
            N+  ++CG   + AL +  G ++ WG N+HG   +G R S   ++     + L G+ + 
Sbjct: 166 ANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRES---FIGPTTVNKLMGIPIC 222

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWH 432
           ++A G  H+ +++ SG +F +G   FG +G    +++  P  V+ LR  KV  +ACG   
Sbjct: 223 QLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDF 282

Query: 433 TAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCG 492
           + A+           A GG LFT+G    G+LGH +   +L P  V  L+    +  +CG
Sbjct: 283 SVAV----------TATGG-LFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACG 331

Query: 493 RMLTVGLTGLGKVYTMGSAVHGQLG 517
           R  T+ +T   K+Y  G    GQLG
Sbjct: 332 RCHTLAITE-NKLYAFGLNTSGQLG 355



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 155/352 (44%), Gaps = 22/352 (6%)

Query: 276 LVTKEGEVFCWGEGKDGRLGHK--VNMDVSCPKLVECLSG-INVQSVSCGEFQTCALTKS 332
           L+ K   + C G   DG+LG       +V    LVE     + ++ ++CG   +  L   
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 333 GEIYTWGHNNH---GADLVGER---RSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
           G +++ G+N+    G D +  +       HW    +  +  G+ V  VACG+ H   ++ 
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYI-DVKQSFVGIHVISVACGDAHCVALTN 129

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPK--EVESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            G LF++G   +G LG   +  V++ +   ++ +    +  +ACG  H+ A+        
Sbjct: 130 DGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL-------- 181

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
              +  G L  WG  D G+LG    E  + PT V +L+     Q + G   ++ LT  G 
Sbjct: 182 --ESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGT 239

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNA 564
           V+  G  + GQ+G  + +D     +   L+ + V  ++ G      +T+ G ++T+G   
Sbjct: 240 VFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGT 299

Query: 565 NGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSS 616
            GQLG G+      P  V  L    V  V CG   T AI  +K  + G  +S
Sbjct: 300 YGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITENKLYAFGLNTS 351



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 114/243 (46%), Gaps = 24/243 (9%)

Query: 224 WGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHA-ALVTKEGE 282
           WG  V G  +G      V +      A  P++ E  +   VQ I+ G+ H+ AL + +G 
Sbjct: 136 WGSNVYG-QLG------VERMNVVAKARYPRIQEINLANIVQ-IACGSNHSLALESTDGV 187

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           +  WG    G+LG         P  V  L GI +  ++ G   +  LT SG ++ WG N 
Sbjct: 188 LHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNM 247

Query: 343 HGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLG 402
            G   +G+   R    P  L   L   +V ++ACGE  +  V+ +G LFT+G GT+G LG
Sbjct: 248 FGQ--IGQNEQRDILYP-SLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLG 304

Query: 403 HGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKG 462
           HGN  +   PK+V  L G  V  VACG  HT AI +             KL+ +G    G
Sbjct: 305 HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE------------NKLYAFGLNTSG 352

Query: 463 RLG 465
           +LG
Sbjct: 353 QLG 355



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 4/158 (2%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           P  +   + + +  ++ GA H+ ++T  G VF WG+   G++G     D+  P LV+ L 
Sbjct: 210 PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLR 269

Query: 313 GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVS 372
              V  ++CGE  + A+T +G ++T+G   +G   +G     S   P+++ + +  V V 
Sbjct: 270 TQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQ--LGHGNQNSELFPKQVMELMGSV-VL 326

Query: 373 KVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVS 410
            VACG  HT  + T  +L+ +G  T G LG  N+++ +
Sbjct: 327 DVACGRCHTLAI-TENKLYAFGLNTSGQLGLLNVKHTT 363


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 33/276 (11%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHK---------VNMDVS 303
           P L++S   + +   ++G  H   V  +G  + WG  + G+ G +         V  D+ 
Sbjct: 82  PSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV 141

Query: 304 CPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLF 363
            PK   C   + V+ V+ G   +  LT+ G ++TWG      D+      +   +P ++ 
Sbjct: 142 IPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI------KQISVPVRV- 192

Query: 364 DTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKV 423
             L+ VR+  +A G +H   +   G L+ +G+  +G LG G+ Q  S P  V+ L  L +
Sbjct: 193 QGLENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL 250

Query: 424 KSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRL 481
             +A G WH+ A+ +            G+++ WG  + GRLG  D ++  K+LP  V  L
Sbjct: 251 VDIAAGGWHSTALTNE-----------GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLL 299

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
              D +Q SCG   +V LT  G++++ G   HG+LG
Sbjct: 300 AGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 58/414 (14%)

Query: 221 VMIWGEGVLGGDIGGAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKE 280
           V+ WG G   G +G   D    +  + VDAL P         +V+++  G++++  +  +
Sbjct: 7   VIAWGSGE-DGQLGLGTD-EEKELASVVDALEP--------FNVRSVVGGSRNSLAICDD 56

Query: 281 GEVFCWGEGKDGRLGHKVNMDV-SCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWG 339
           G++F WG  + G LGH       S P LV+ L+ + +   + G +   A+   G  Y WG
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWG 116

Query: 340 HNNHG-------ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFT 392
            N +G        D  G    R   +P++    L    V +VA G  H+ +++  G ++T
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQL---TVRQVAAGGTHSVVLTREGYVWT 173

Query: 393 YGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGK 452
           +G         G+++ +S P  V+ L    V+ +A G +H  A+ +            G 
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGLE--NVRLIAVGAFHNLALKE-----------DGT 216

Query: 453 LFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAV 512
           L+ WG+ + G+LG  D + +  P  V  L D   V  + G   +  LT  G+VY  G   
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGE 276

Query: 513 HGQLGNPKAKDRSITVVEGK---LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
           HG+LG     D+S  ++  K   L  E +  +S G  H   LT  G ++++G+  +G+LG
Sbjct: 277 HGRLGF-GDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335

Query: 570 LG----DSQERETPTFVEALRDR------------QVESVVCGSSITAAICLHK 607
            G      Q  E P  +     R              + V CG   T AI   K
Sbjct: 336 YGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWK 389



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 17/197 (8%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCG 322
           +V+ I++GA H   + ++G ++ WG  + G+LG       S P  V+ L  + +  ++ G
Sbjct: 197 NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAG 256

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
            + + ALT  GE+Y WG   HG    G+    S  LP+K+ + L G  + +V+CG  H+ 
Sbjct: 257 GWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV-NLLAGEDIIQVSCGGTHSV 315

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV----------------ESLRGLKVKSV 426
            ++  G++F++G G  G LG+G      QP E+                E       K V
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHV 375

Query: 427 ACGPWHTAAIVDIMVDR 443
           ACG  HT AIV+   D+
Sbjct: 376 ACGGRHTLAIVEWKYDQ 392



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 32/54 (59%)

Query: 551 LTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAIC 604
           + S  SV  WG   +GQLGLG  +E+E  + V+AL    V SVV GS  + AIC
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC 54


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 44/346 (12%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           +S G +H A+VT   +++ +G    G+LG      +S P  ++ L    V+  +CG   T
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
              T +G +Y  G NN G   +G+   R  +     F   D ++  +++ G   +A ++ 
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIK--QLSAGANTSAALTE 195

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+LF +GD + G +G  N  NV  P EV    G  +  ++CG +H+A +          
Sbjct: 196 DGKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVT--------- 244

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLL-----PTCVTRLVDFDFVQASCGRMLTVGLTG 501
               G+L+T+G+ + G+LG      +LL     P  V  + D   +Q +CG   TV LT 
Sbjct: 245 --TDGELYTFGEPENGKLGL---PNQLLINHRSPQRVLGIPD-KVIQVACGGGHTVVLT- 297

Query: 502 LGKVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLT 552
              VY  G    GQLG          PK  DR        +K++ +  IS G  H A++T
Sbjct: 298 EKVVYAFGLGQFGQLGLGTFLFETSEPKIIDR--------IKDQKISHISCGENHTALMT 349

Query: 553 SGGSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
             G +YT+G   +G+LGLG  +   +  PT         V+ + CG
Sbjct: 350 DIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 51/276 (18%)

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           ++CG+ HTAIV+ + +L+ +G   +G LG G+   +S+P  +++L+  KVK  ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 434 AAIVDI------------------MVDRCKSNAIG------------------------G 451
               D                     DR   + IG                        G
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDG 197

Query: 452 KLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSA 511
           KLF WGD  +G++G  +     +P  VT      ++  SCG   +  +T  G++YT G  
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVTTDGELYTFGEP 255

Query: 512 VHGQLGNPK---AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQL 568
            +G+LG P       RS   V G + ++ ++ ++ G  H  VLT    VY +G    GQL
Sbjct: 256 ENGKLGLPNQLLINHRSPQRVLG-IPDKVIQ-VACGGGHTVVLTE-KVVYAFGLGQFGQL 312

Query: 569 GLGDSQ-ERETPTFVEALRDRQVESVVCGSSITAAI 603
           GLG    E   P  ++ ++D+++  + CG + TA +
Sbjct: 313 GLGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 154/335 (45%), Gaps = 31/335 (9%)

Query: 246 TQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH-KVNMDVSC 304
           TQ  A  P  +E      V  +S    H+A V + G+V   G+      GH   +  +  
Sbjct: 149 TQCVAFTP--IEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFR 206

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           PKLVE L G   + V+ G   T  L++ G  YT G N HG    G+   R   +P K+ +
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRP--VP-KVVE 263

Query: 365 TLDGV-RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESL--RGL 421
            L  +  V ++A G  +   V+  G ++++G G+   LGHG  Q+  QP+ +++   +G+
Sbjct: 264 FLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323

Query: 422 KVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRL 481
            +  V+ G  H  A+         SN   G+++TWG    G LGH D   K+ P  +  L
Sbjct: 324 HILRVSAGDEHAVAL--------DSN---GRVYTWGKGYCGALGHGDENDKITPQVLVNL 372

Query: 482 VDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSIT-------VVEGKLK 534
            +   VQ    +  T  L   G +Y  G    G LG P   DR ++       V+E  LK
Sbjct: 373 NNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFP---DRGVSDKVLRPRVLE-CLK 428

Query: 535 EEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLG 569
              V  +S+G YH  V+T  G ++ +G N   QLG
Sbjct: 429 PHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 15/222 (6%)

Query: 370 RVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQN-VSQPKEVESLRGLKVKSVAC 428
           +V++V+  + H+A V  SGQ+ T GD +    GH +    + +PK VE+L+G   K VA 
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAA 223

Query: 429 GPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD-FV 487
           G   T     + + R       G  +T G    G+LGH D   + +P  V  L      V
Sbjct: 224 GLHFT-----VFLSR------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVV 272

Query: 488 QASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKD--RSITVVEGKLKEEFVKGISSGS 545
           Q + G    + +T  G VY+ GS  +  LG+ + +D  +   +   K K   +  +S+G 
Sbjct: 273 QIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGD 332

Query: 546 YHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD 587
            H   L S G VYTWGK   G LG GD  ++ TP  +  L +
Sbjct: 333 EHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 16/270 (5%)

Query: 253 PKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLS 312
           PKL+E+      + ++ G      +++EG  +  G    G+LGH   +D   PK+VE L 
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266

Query: 313 GIN-VQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRV 371
            I  V  ++ G     A+T+ G +Y++G  ++     GE++        + F    G+ +
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKR-KGIHI 325

Query: 372 SKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPW 431
            +V+ G+ H   + ++G+++T+G G  G LGHG+  +   P+ + +L       V     
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKR 385

Query: 432 HTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVD---GERKLLPTCVTRLVDFDFVQ 488
            T  +V+           GG L+ +G    G LG  D    ++ L P  +  L      Q
Sbjct: 386 KTFVLVE-----------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQ 434

Query: 489 ASCGRMLTVGLTGLGKVYTMGSAVHGQLGN 518
            S G   T+ +T  G+++  G     QLG+
Sbjct: 435 VSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 21/249 (8%)

Query: 234 GGAVDGSVSQNKTQVDALLPKLLESAVMLD-VQNISLGAKHAALVTKEGEVFCWGEGKDG 292
           G    G +    T +D  +PK++E    +  V  I+ G  +   VT++G V+ +G G + 
Sbjct: 241 GSNTHGQLGHGDT-LDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNF 299

Query: 293 RLGHKVNMDVSCPKLVECLS--GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGE 350
            LGH    D   P++++     GI++  VS G+    AL  +G +YTWG    GA  +G 
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGA--LGH 357

Query: 351 RRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGH---GNLQ 407
                   P+ L + L+     +V   +  T ++   G L+ +G   FG LG    G   
Sbjct: 358 GDENDKITPQVLVN-LNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD 416

Query: 408 NVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHV 467
            V +P+ +E L+  +V  V+ G +HT  +              G++F +GD ++ +LGH 
Sbjct: 417 KVLRPRVLECLKPHRVSQVSTGLYHTIVVTQ-----------RGRIFGFGDNERAQLGHD 465

Query: 468 DGERKLLPT 476
                L PT
Sbjct: 466 SLRGCLEPT 474



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 2/171 (1%)

Query: 247 QVDALLPKLLESAVM--LDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSC 304
           Q D L P+++++     + +  +S G +HA  +   G V+ WG+G  G LGH    D   
Sbjct: 306 QQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKIT 365

Query: 305 PKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFD 364
           P+++  L+      V   + +T  L + G +Y +G    G+    +R      L  ++ +
Sbjct: 366 PQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLE 425

Query: 365 TLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEV 415
            L   RVS+V+ G +HT +V+  G++F +GD     LGH +L+   +P E+
Sbjct: 426 CLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRD-RQVE 591
           LK    K +++G +    L+  G  YT G N +GQLG GD+ +R  P  VE L+    V 
Sbjct: 213 LKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVV 272

Query: 592 SVVCGSSITAAI 603
            +  G S   A+
Sbjct: 273 QIAAGPSYVLAV 284


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 38/344 (11%)

Query: 266 NISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQ 325
           ++S G +H+A+VT   +++ +G    G+LG      VS P  V+ L    V+  +CG   
Sbjct: 39  HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
           T   T+ G +Y  G N+ G   +G+   R+ +     F +    ++ +++ G   +A ++
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQH--KIKQLSAGSNTSAALT 156

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCK 445
             G+LF +GD + G +G  N+ N   P +V    G  V  ++CG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLPNILNACVPHQV--TIGKPVSWISCGYYHSAFVT-------- 206

Query: 446 SNAIGGKLFTWGDADKGRLGHVDG--ERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                G+L+ +G+++ G+LG  +       +P  V  + +   +Q +CG   +V LT   
Sbjct: 207 ---TDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLTE-D 261

Query: 504 KVYTMGSAVHGQLG---------NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSG 554
            VYT G    GQLG          PK       VVE  +  + +  IS G  H A+LT  
Sbjct: 262 AVYTFGLGQFGQLGLGTLLFETSEPK-------VVE-NIGNKTISYISCGENHAALLTDN 313

Query: 555 GSVYTWGKNANGQLGLG--DSQERETPTFVEALRDRQVESVVCG 596
           G +YT+G   +G+LGLG  +   + TPT         V+ V CG
Sbjct: 314 GLMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACG 357



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
           V  SCG   +  +TG  K+Y  GS   GQLG       S       LK E VK  + G  
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRN 97

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDR-QVESVVCGSSITAAICL 605
           H  V T GG+VY  G N  GQLGLGD++ER T   V     + +++ +  GS+ +AA+  
Sbjct: 98  HTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALTE 157

Query: 606 HKSISVGDQSSCSQCRMP 623
              + +   +S  Q  +P
Sbjct: 158 DGRLFMWGDNSEGQIGLP 175



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 533 LKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVES 592
            K +    +S G  H AV+T    +Y +G N  GQLGLG       PT V+AL+  +V+ 
Sbjct: 32  FKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL 91

Query: 593 VVCGSSIT 600
             CG + T
Sbjct: 92  AACGRNHT 99


>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
           protein 1-like [Metaseiulus occidentalis]
          Length = 550

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 139/303 (45%), Gaps = 29/303 (9%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEF-Q 325
            S  A  A LVT+E EV+  G    G LG         P  VE LS   VQS +CG    
Sbjct: 49  FSSSATEALLVTEEDEVWAMGSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPH 108

Query: 326 TCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVS 385
             ALT  GE+Y WGHN  G   VG  ++     P  +FD      V+++ACG +H+ I +
Sbjct: 109 VLALTARGEVYGWGHN--GYSQVGNDQNSQANSPVLVFDRQP---VAQIACGGYHSVIRT 163

Query: 386 TSGQLFTYGDGTFGVLGHGNLQNVSQPKEV-ESLRGLKVKSVACGPWHTAAIVDIMVDRC 444
            SG ++T+G    G LG     N   P++V  ++  +K   ++CG   T A+ D      
Sbjct: 164 VSGGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFDT----- 218

Query: 445 KSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
                 G+++ WG    G+LG      +  P  + +L D    + +CG   T+ LT  G 
Sbjct: 219 ------GEVYVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGL 272

Query: 505 VYTMGSAVHGQLGNPKAKDRSITV----VEGKLKEEFVKGISSGSYH--VAVLTSGGSVY 558
           VY  G+   GQLG     ++SI V    + G++ E     +++  Y+   A +T    V 
Sbjct: 273 VYVWGANALGQLGTENKTNQSIPVLMKTIHGRINE-----VAATQYNQTSAAMTETSKVL 327

Query: 559 TWG 561
            WG
Sbjct: 328 MWG 330



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 16/263 (6%)

Query: 328 ALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEW-HTAIVST 386
           AL  + E   W   ++ A  +G   +RS   P K+ + L    V   ACG   H   ++ 
Sbjct: 56  ALLVTEEDEVWAMGSNAAGCLGIGDTRSCLSPTKV-EGLSKKGVQSFACGTGPHVLALTA 114

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G+++ +G   +  +G  N QN      V       V  +ACG +H+             
Sbjct: 115 RGEVYGWGHNGYSQVG--NDQNSQANSPVLVFDRQPVAQIACGGYHSVI----------- 161

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVT-RLVDFDFVQASCGRMLTVGLTGLGKV 505
             + G ++TWG  + G+LG         P  V   + +      SCG   T  +   G+V
Sbjct: 162 RTVSGGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEV 221

Query: 506 YTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           Y  GS  +GQLG     ++   V   +LK+ F+K ++ G  H   LT  G VY WG NA 
Sbjct: 222 YVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANAL 281

Query: 566 GQLGLGDSQERETPTFVEALRDR 588
           GQLG  +   +  P  ++ +  R
Sbjct: 282 GQLGTENKTNQSIPVLMKTIHGR 304



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 101/225 (44%), Gaps = 19/225 (8%)

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVD 442
           +V+   +++  G    G LG G+ ++   P +VE L    V+S ACG   T   V  +  
Sbjct: 58  LVTEEDEVWAMGSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACG---TGPHVLALTA 114

Query: 443 RCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFD---FVQASCGRMLTVGL 499
           R       G+++ WG     ++G+    +   P  V     FD     Q +CG   +V  
Sbjct: 115 R-------GEVYGWGHNGYSQVGNDQNSQANSPVLV-----FDRQPVAQIACGGYHSVIR 162

Query: 500 TGLGKVYTMGSAVHGQLG-NPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVY 558
           T  G VYT G    GQLG +     +S   V G + E    GIS G      +   G VY
Sbjct: 163 TVSGGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVY 222

Query: 559 TWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            WG N NGQLGLG    +  P  +E L+D  ++ V CG S T A+
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLAL 267



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 5/165 (3%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLV-ECLSGINVQSVSCG 322
           V  I+ G  H+ + T  G V+ WG+   G+LG   +++   P+ V   ++ +    +SCG
Sbjct: 149 VAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCG 208

Query: 323 EFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTA 382
              T A+  +GE+Y WG N +G   +G   ++    P K+ + L  V + KVACG  HT 
Sbjct: 209 HNFTTAVFDTGEVYVWGSNGNGQLGLGSLTNQP--FPVKI-EQLKDVFIKKVACGFSHTL 265

Query: 383 IVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVA 427
            ++  G ++ +G    G LG  N  N S P  ++++ G ++  VA
Sbjct: 266 ALTDEGLVYVWGANALGQLGTENKTNQSIPVLMKTIHG-RINEVA 309



 Score = 43.1 bits (100), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 11/97 (11%)

Query: 507 TMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGI------SSGSYHVAVLTSGGSVYTW 560
           T+ ++  G +G+P+       ++   +K EF++ +      SS +    ++T    V+  
Sbjct: 14  TLATSSGGIVGDPQK-----WLIFSLVKPEFLRKVRLCCVFSSSATEALLVTEEDEVWAM 68

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGS 597
           G NA G LG+GD++   +PT VE L  + V+S  CG+
Sbjct: 69  GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGT 105



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 504 KVYTMGSAVHGQLGNPKAKD-RSITVVEGKLKEEFVKGISSGS-YHVAVLTSGGSVYTWG 561
           +V+ MGS   G LG    +   S T VEG L ++ V+  + G+  HV  LT+ G VY WG
Sbjct: 64  EVWAMGSNAAGCLGIGDTRSCLSPTKVEG-LSKKGVQSFACGTGPHVLALTARGEVYGWG 122

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSISVGDQSSCSQ 619
            N   Q+  G+ Q  +  + V     + V  + CG   +    +   +    Q++C Q
Sbjct: 123 HNGYSQV--GNDQNSQANSPVLVFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQ 178



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL 311
            P  +E    + ++ ++ G  H   +T EG V+ WG    G+LG +   + S P L++ +
Sbjct: 242 FPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENKTNQSIPVLMKTI 301

Query: 312 SGINVQSVSCGEFQ--TCALTKSGEIYTWG 339
            G  +  V+  ++   + A+T++ ++  WG
Sbjct: 302 HG-RINEVAATQYNQTSAAMTETSKVLMWG 330


>gi|348505544|ref|XP_003440321.1| PREDICTED: serine/threonine-protein kinase Nek8-like [Oreochromis
           niloticus]
          Length = 729

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 144/338 (42%), Gaps = 43/338 (12%)

Query: 283 VFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNN 342
           V+ WG G            +S P  +  L+   V  VS G  Q   +TKSG + TW   +
Sbjct: 322 VYTWGSG------------ISTPLRLPMLN-TEVLQVSLGRTQKMGVTKSGRLITWEAPS 368

Query: 343 HG---ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFG 399
            G   A L G           +  +   GV +  V+CG+  T  ++  G + T+G G+ G
Sbjct: 369 VGSSEASLPGVVEQIQPQFISRFLEGQSGVTIKSVSCGDLFTTCMTDRGIIMTFGSGSNG 428

Query: 400 VLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDA 459
            LGHGN  +V+QPK VE+L G ++  V+CG  H  A+ +   +R        ++F WG  
Sbjct: 429 CLGHGNFNDVTQPKIVEALLGYELIQVSCGASHVLAVTN---ER--------EVFAWGRG 477

Query: 460 DKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG-- 517
           D GRLG    +    P  V    DF+  +  CG   ++ ++    +   GS    +LG  
Sbjct: 478 DNGRLGLGTQDTHNSPQQVCLPGDFEAQRVVCGVDCSMIISNQHSIVACGSNRFNKLGLD 537

Query: 518 --------NPKAKDRSI----TVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
                   NP  +   +     V    L  E +  I  G+ H   +T  G  +T+G N +
Sbjct: 538 KITAGEEPNPLNQVEEVHSYTPVQSAPLNTEKIVYIDIGTAHSVAVTENGQCFTFGSNQH 597

Query: 566 GQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           GQ+G    +    P  V  L+   +    CG + T AI
Sbjct: 598 GQIGSSSRRSSRAPCKVSGLQG--ITMAACGDAFTLAI 633



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 12/295 (4%)

Query: 235 GAVDGSVSQNKTQVDALLPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRL 294
            ++ G V Q + Q    + + LE    + ++++S G      +T  G +  +G G +G L
Sbjct: 374 ASLPGVVEQIQPQ---FISRFLEGQSGVTIKSVSCGDLFTTCMTDRGIIMTFGSGSNGCL 430

Query: 295 GHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSR 354
           GH    DV+ PK+VE L G  +  VSCG     A+T   E++ WG  ++G   +G     
Sbjct: 431 GHGNFNDVTQPKIVEALLGYELIQVSCGASHVLAVTNEREVFAWGRGDNGR--LGLGTQD 488

Query: 355 SHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKE 414
           +H  P+++    D     +V CG   + I+S    +   G   F  LG   +    +P  
Sbjct: 489 THNSPQQVCLPGD-FEAQRVVCGVDCSMIISNQHSIVACGSNRFNKLGLDKITAGEEPNP 547

Query: 415 VESLRGL-KVKSVACGPWHTAAIVDIMVDRCKSNAI--GGKLFTWGDADKGRLGHVDGER 471
           +  +  +     V   P +T  IV I +    S A+   G+ FT+G    G++G      
Sbjct: 548 LNQVEEVHSYTPVQSAPLNTEKIVYIDIGTAHSVAVTENGQCFTFGSNQHGQIGSSSRRS 607

Query: 472 KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSI 526
              P  V+ L       A+CG   T+ +   G+VYT G    G+LG  K +D  I
Sbjct: 608 SRAPCKVSGLQGITM--AACGDAFTLAIGSEGEVYTWGKGARGRLGR-KEEDSGI 659



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 154/367 (41%), Gaps = 38/367 (10%)

Query: 263 DVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECL----------- 311
           +V  +SLG      VTK G +  W     G      + + S P +VE +           
Sbjct: 341 EVLQVSLGRTQKMGVTKSGRLITWEAPSVG------SSEASLPGVVEQIQPQFISRFLEG 394

Query: 312 -SGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVR 370
            SG+ ++SVSCG+  T  +T  G I T+G  ++G   +G         P K+ + L G  
Sbjct: 395 QSGVTIKSVSCGDLFTTCMTDRGIIMTFGSGSNGC--LGHGNFNDVTQP-KIVEALLGYE 451

Query: 371 VSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGP 430
           + +V+CG  H   V+   ++F +G G  G LG G     + P++V      + + V CG 
Sbjct: 452 LIQVSCGASHVLAVTNEREVFAWGRGDNGRLGLGTQDTHNSPQQVCLPGDFEAQRVVCGV 511

Query: 431 WHTAAIVD----IMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDF 486
             +  I +    +     + N +G    T G+ +   L  V+      P     L     
Sbjct: 512 DCSMIISNQHSIVACGSNRFNKLGLDKITAGE-EPNPLNQVEEVHSYTPVQSAPLNTEKI 570

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS--- 543
           V    G   +V +T  G+ +T GS  HGQ+G+   +           K   ++GI+    
Sbjct: 571 VYIDIGTAHSVAVTENGQCFTFGSNQHGQIGSSSRRSSR-----APCKVSGLQGITMAAC 625

Query: 544 GSYHVAVLTSGGSVYTWGKNANGQLGLGDSQER-ETPTFVEALRDRQVESVVC--GSSIT 600
           G      + S G VYTWGK A G+LG  +       P  ++      V SV C  G+++ 
Sbjct: 626 GDAFTLAIGSEGEVYTWGKGARGRLGRKEEDSGIPKPVQLDESHPFAVTSVACCHGNTLL 685

Query: 601 AAICLHK 607
            A+CL +
Sbjct: 686 -ALCLRR 691



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 14/169 (8%)

Query: 451 GKLFTW-----GDADKGRLGHVDGERKLLPTCVTRLVD----FDFVQASCGRMLTVGLTG 501
           G+L TW     G ++    G V+   ++ P  ++R ++          SCG + T  +T 
Sbjct: 359 GRLITWEAPSVGSSEASLPGVVE---QIQPQFISRFLEGQSGVTIKSVSCGDLFTTCMTD 415

Query: 502 LGKVYTMGSAVHGQLGNPKAKDRS-ITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTW 560
            G + T GS  +G LG+    D +   +VE  L  E ++ +S G+ HV  +T+   V+ W
Sbjct: 416 RGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELIQ-VSCGASHVLAVTNEREVFAW 474

Query: 561 GKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHKSI 609
           G+  NG+LGLG      +P  V    D + + VVCG   +  I    SI
Sbjct: 475 GRGDNGRLGLGTQDTHNSPQQVCLPGDFEAQRVVCGVDCSMIISNQHSI 523


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 162/368 (44%), Gaps = 37/368 (10%)

Query: 258 SAVMLDVQNISLGA---KHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGI 314
           S  ++ +QN+   A     +A + K G+++ WG  K G LG+    +++ P LVECL  +
Sbjct: 53  SPQLVPIQNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHL 112

Query: 315 NVQSVSCGEFQTCALTKSGEIYTWGHNNHGA-----DLVGERRSRSHWLPRKLFDTLD-- 367
           + + V+CG +   A+T+ G++YTWG+ +HG      D + +  SR  +  +K   +    
Sbjct: 113 DFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLP 172

Query: 368 -----GVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLK 422
                  +V +V+ G+  T I+S  G +++ G    G+LG+       + K  E L   +
Sbjct: 173 ELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILGY-------ETKNAEELSFKQ 225

Query: 423 VKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLV 482
           + ++          +D   D   +    G +F WG    G+LG         P  +  L 
Sbjct: 226 ISNLK-----NIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLP 280

Query: 483 DFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGIS 542
                Q SCG      L+  G +YT G    GQLG P  +D  I        +  +  +S
Sbjct: 281 KIK--QFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQD--IPTPHKISFDHNIDKVS 336

Query: 543 SGSYHVAVLTSGGSVYTWGKNANGQLGLGDSQERETPT---FVEALRDRQVESVVCGSSI 599
            G  HV ++ S   +Y  G+   GQLG G   E E+P    +   L    V  + CG S 
Sbjct: 337 CGQAHVGII-SNNKLYMHGRGKEGQLGRGS--ETESPNSSRYSPLLVLENVLKIACGGSH 393

Query: 600 TAAICLHK 607
           + AI   K
Sbjct: 394 SFAIVNQK 401



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 137/297 (46%), Gaps = 39/297 (13%)

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
           F +  +    ++Y WG NN G   +G   S S + P+     +    V  VAC    +A 
Sbjct: 21  FTSSFVFSQEQLYAWGWNNFGQ--LGIGNSISQYSPQ----LVPIQNVLFVACKSSVSAA 74

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           +  SG+L+T+G   FG+LG+G ++N++ P  VE L+ L  K VACG +H AAI       
Sbjct: 75  IDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITR----- 129

Query: 444 CKSNAIGGKLFTWGDADKGRLGH-VDGERKL----------------LPTCVTRLVDFDF 486
                  G+L+TWG+ D G+LGH  D   KL                LP  V   ++F  
Sbjct: 130 ------DGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVK--LNFKV 181

Query: 487 VQASCGRMLTVGLTGLGKVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSY 546
            Q S G   T+ L+  G VY++G    G LG        ++  +    +  ++ I SG+ 
Sbjct: 182 HQVSLGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSFKQISNLKNIIQ-IDSGTD 240

Query: 547 HVAVLTSGGSVYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
               L S G+++ WG N  GQLG       +TP  ++ L   +++   CG     A+
Sbjct: 241 FSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGL--PKIKQFSCGEQFIGAL 295



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 41/351 (11%)

Query: 274 AALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQTCALTKSG 333
           ++ V  + +++ WG    G+LG   ++    P+LV      NV  V+C    + A+ KSG
Sbjct: 23  SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPIQ---NVLFVACKSSVSAAIDKSG 79

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
           ++YTWG +  G  L+G  +  +  +P  L + L  +    VACG +H A ++  GQL+T+
Sbjct: 80  KLYTWGRSKFG--LLGNGQVENINIPT-LVECLKHLDFKYVACGNYHMAAITRDGQLYTW 136

Query: 394 GDGTFGVLGHG--NLQNVSQPKEVESLRGL-------------KVKSVACGPWHTAAIVD 438
           G+   G LGH   NL  +   ++ E  + L             KV  V+ G   T  + D
Sbjct: 137 GNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSD 196

Query: 439 IMVDRCKSNAIGGKLFTWGDADKGRLGH-VDGERKLLPTCVTRLVDFDFVQASCGRMLTV 497
                       G +++ G   KG LG+      +L    ++ L   + +Q   G   +V
Sbjct: 197 -----------DGNVYSVGLNKKGILGYETKNAEELSFKQISNLK--NIIQIDSGTDFSV 243

Query: 498 GLTGLGKVYTMGSAVHGQLGNPK-AKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGS 556
            L   G ++  GS   GQLG P  +  ++   ++G  K   +K  S G   +  L++ G 
Sbjct: 244 ALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLPK---IKQFSCGEQFIGALSADGV 300

Query: 557 VYTWGKNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAICLHK 607
           +YTWG   +GQLG    Q+  TP  +    D  ++ V CG +    I  +K
Sbjct: 301 LYTWGFGGDGQLGTPSKQDIPTPHKISF--DHNIDKVSCGQAHVGIISNNK 349



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 35/281 (12%)

Query: 252 LPKLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCP------ 305
           +P L+E    LD + ++ G  H A +T++G+++ WG    G+LGH  +     P      
Sbjct: 102 IPTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYE 161

Query: 306 --------KLVECLS-GINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSH 356
                   KL E +     V  VS G+  T  L+  G +Y+ G N  G  ++G     + 
Sbjct: 162 YQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKG--ILGYETKNAE 219

Query: 357 WLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVE 416
            L  K    L    + ++  G   +  + + G +F +G   FG LG  +   +  P++++
Sbjct: 220 ELSFKQISNLK--NIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIK 277

Query: 417 SLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPT 476
            L   K+K  +CG     A+           +  G L+TWG    G+LG     ++ +PT
Sbjct: 278 GLP--KIKQFSCGEQFIGAL-----------SADGVLYTWGFGGDGQLG--TPSKQDIPT 322

Query: 477 CVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVHGQLG 517
                 D +  + SCG+   VG+    K+Y  G    GQLG
Sbjct: 323 PHKISFDHNIDKVSCGQA-HVGIISNNKLYMHGRGKEGQLG 362


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 151/320 (47%), Gaps = 28/320 (8%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G  H+     +G V+ WG    G+LG     + + P  V+ LSG  V +V+ G   +
Sbjct: 401 VAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGLSG--VVAVAAGFDHS 458

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            AL   G ++ WG N +G   +GE  + +  +P ++        V  VA G  H+  V +
Sbjct: 459 LALRSDGSVWAWGSNAYGQ--LGEGTTTNRLVPVQVLS-----GVVAVAAGSNHSLAVRS 511

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++T+G   +G LG G   N   P +V+ L G  V +VA G +H+ A+         S
Sbjct: 512 DGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSG--VAAVAAGSFHSLAV--------HS 561

Query: 447 NAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVY 506
           +   G ++ WG    G LG      +L+P  V  L     V  + G   ++ +   G V+
Sbjct: 562 D---GSVWAWGSNSSGELGDGTTSNRLVPGRVPGL--SGGVAVAAGGFHSLVVRSDGTVW 616

Query: 507 TMGSAVHGQLGNPKAKDRSITV-VEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNAN 565
           T GS   G+LG+     RS+ V V+G      V  + +G+ H   + S G+V+TWG N+ 
Sbjct: 617 TWGSNSFGELGDGTTTSRSVPVQVQGL---SGVVAVDAGNSHSLAVRSDGTVWTWGYNSY 673

Query: 566 GQLGLGDSQERETPTFVEAL 585
           GQLG G +  R  P  V  L
Sbjct: 674 GQLGDGTTTRRSVPVQVPGL 693



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 173/401 (43%), Gaps = 62/401 (15%)

Query: 244 NKTQVDALLP---KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNM 300
           + T+ D L+P   + L   V  DV     G+ H+  +  +G V+ WG    G+LG   + 
Sbjct: 280 DGTKSDRLVPVRVQGLSGVVASDV-----GSYHSLALRSDGSVWAWGHNSSGQLGDDSST 334

Query: 301 DVSCPKLVECLSGINVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPR 360
             S P  V  LSG    +V+ G   + A+   G ++ WG N  G    G   +R+   P 
Sbjct: 335 SRSVPVQVRGLSGG--MAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRAS--PV 390

Query: 361 KLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRG 420
           ++     GV    VA G  H+    + G ++ +G    G LG G  +N + P +V+ L G
Sbjct: 391 QVQGLGGGV---AVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGLSG 447

Query: 421 LKVKSVACGPWHTAAI-VDIMVDRCKSNAIG----------------------------- 450
             V +VA G  H+ A+  D  V    SNA G                             
Sbjct: 448 --VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPVQVLSGVVAVAAGSNH 505

Query: 451 -------GKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
                  G ++TWG    G+LG      +L+P  V  L     V A  G   ++ +   G
Sbjct: 506 SLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAVAA--GSFHSLAVHSDG 563

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKE-EFVKGISSGSYHVAVLTSGGSVYTWGK 562
            V+  GS   G+LG+    +R   +V G++        +++G +H  V+ S G+V+TWG 
Sbjct: 564 SVWAWGSNSSGELGDGTTSNR---LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGS 620

Query: 563 NANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
           N+ G+LG G +  R  P  V+ L    V +V  G+S + A+
Sbjct: 621 NSFGELGDGTTTSRSVPVQVQGLSG--VVAVDAGNSHSLAV 659



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 36/342 (10%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G+ ++  +  +G V+  G    G+LG     + S P  V  LSG  V +V+ G   +
Sbjct: 51  LAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPGLSG--VVAVAAGSSHS 108

Query: 327 CALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVST 386
            A+   G ++ WG N+ G   +G+  +     P ++   L GV    VA G  ++  V +
Sbjct: 109 LAVRHDGTVWAWGSNSDGQ--LGDGTTTMRLTPVRV-QGLSGVV--SVAAGSSYSLAVRS 163

Query: 387 SGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKS 446
            G ++ +G    G LG G   N   P +V  L G  V SVA G  H+ A++         
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGLSG--VVSVAAGSSHSLAVLSD------- 214

Query: 447 NAIGGKLFTWGDADKGRLGHVDGER--KLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGK 504
               G ++ WG    G+LG  DG +  +L+P  V  L     V A     L V     G 
Sbjct: 215 ----GSVWAWGANSSGQLG--DGTKINRLVPVQVPGLSGVVAVAAGAAHSLAV--RSDGT 266

Query: 505 VYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISS---GSYHVAVLTSGGSVYTWG 561
           V+T G+   GQLG+    DR + V     + + + G+ +   GSYH   L S GSV+ WG
Sbjct: 267 VWTWGANSFGQLGDGTKSDRLVPV-----RVQGLSGVVASDVGSYHSLALRSDGSVWAWG 321

Query: 562 KNANGQLGLGDSQERETPTFVEALRDRQVESVVCGSSITAAI 603
            N++GQLG   S  R  P  V  L      +V  GSS + A+
Sbjct: 322 HNSSGQLGDDSSTSRSVPVQVRGLSGGM--AVTAGSSHSLAV 361



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 159/384 (41%), Gaps = 78/384 (20%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGH--KVN--MDVSCPKL------------ 307
           V +++ G+ H+  V  +G V+ WG    G+LG   K+N  + V  P L            
Sbjct: 198 VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAH 257

Query: 308 ----------------------------------VECLSGINVQSVSCGEFQTCALTKSG 333
                                             V+ LSG+    V  G + + AL   G
Sbjct: 258 SLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLALRSDG 315

Query: 334 EIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIVSTSGQLFTY 393
            ++ WGHN+ G   +G+  S S  +P ++     G+ V+    G  H+  V + G ++ +
Sbjct: 316 SVWAWGHNSSGQ--LGDDSSTSRSVPVQVRGLSGGMAVT---AGSSHSLAVGSDGTVWAW 370

Query: 394 GDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDRCKSNAIGGKL 453
           G    G  G G   N + P +V+ L G    +VA G  H+ A         +S+   G +
Sbjct: 371 GSNFSGERGEGTTNNRASPVQVQGLGG--GVAVAAGFNHSLA--------ARSD---GSV 417

Query: 454 FTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLGKVYTMGSAVH 513
           + WG  D G+LG         P  V  L     V  + G   ++ L   G V+  GS  +
Sbjct: 418 WAWGSNDSGQLGDGTTRNSTSPVQVQGL--SGVVAVAAGFDHSLALRSDGSVWAWGSNAY 475

Query: 514 GQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKNANGQLGLGDS 573
           GQLG     +R + V   ++    V  +++GS H   + S G+V+TWG N  GQLG G +
Sbjct: 476 GQLGEGTTTNRLVPV---QVLSGVVA-VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTT 531

Query: 574 QERETPTFVEALRDRQVESVVCGS 597
             R  P  V+ L    V +V  GS
Sbjct: 532 SNRLVPVQVQGLSG--VAAVAAGS 553



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 22/265 (8%)

Query: 254 KLLESAVMLDVQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSG 313
           +L+   V+  V  ++ G+ H+  V  +G V+ WG    G+LG     +   P  V+ LSG
Sbjct: 486 RLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSG 545

Query: 314 INVQSVSCGEFQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSK 373
             V +V+ G F + A+   G ++ WG N+ G   +G+  + +  +P ++     GV    
Sbjct: 546 --VAAVAAGSFHSLAVHSDGSVWAWGSNSSGE--LGDGTTSNRLVPGRVPGLSGGV---A 598

Query: 374 VACGEWHTAIVSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHT 433
           VA G +H+ +V + G ++T+G  +FG LG G   + S P +V+ L G  V +V  G  H+
Sbjct: 599 VAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLSG--VVAVDAGNSHS 656

Query: 434 AAIVDIMVDRCKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGR 493
            A+        +S+   G ++TWG    G+LG     R+ +P  V  L     V  + G 
Sbjct: 657 LAV--------RSD---GTVWTWGYNSYGQLGDGTTTRRSVPVQVPGL--SGVVAMATGA 703

Query: 494 MLTVGLTGLGKVYTMGSAVHGQLGN 518
           +  + +   G V+  G    GQLGN
Sbjct: 704 LHPLVVRSDGTVWAWGYNSFGQLGN 728



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 144/322 (44%), Gaps = 24/322 (7%)

Query: 264 VQNISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGE 323
           V +++ G+ ++  V  +G V+ WG    G+LG     +   P  V  LSG  V SV+ G 
Sbjct: 148 VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGLSG--VVSVAAGS 205

Query: 324 FQTCALTKSGEIYTWGHNNHGADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAI 383
             + A+   G ++ WG N+ G    G + +R   +P ++      V V+  A    H+  
Sbjct: 206 SHSLAVLSDGSVWAWGANSSGQLGDGTKINRL--VPVQVPGLSGVVAVAAGAA---HSLA 260

Query: 384 VSTSGQLFTYGDGTFGVLGHGNLQNVSQPKEVESLRGLKVKSVACGPWHTAAIVDIMVDR 443
           V + G ++T+G  +FG LG G   +   P  V+ L G+    V  G +H+ A+       
Sbjct: 261 VRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDV--GSYHSLAL------- 311

Query: 444 CKSNAIGGKLFTWGDADKGRLGHVDGERKLLPTCVTRLVDFDFVQASCGRMLTVGLTGLG 503
            +S+   G ++ WG    G+LG      + +P  V  L     V A     L VG    G
Sbjct: 312 -RSD---GSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGSD--G 365

Query: 504 KVYTMGSAVHGQLGNPKAKDRSITVVEGKLKEEFVKGISSGSYHVAVLTSGGSVYTWGKN 563
            V+  GS   G+ G     +R+  V    L       +++G  H     S GSV+ WG N
Sbjct: 366 TVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGVA--VAAGFNHSLAARSDGSVWAWGSN 423

Query: 564 ANGQLGLGDSQERETPTFVEAL 585
            +GQLG G ++   +P  V+ L
Sbjct: 424 DSGQLGDGTTRNSTSPVQVQGL 445



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 11/141 (7%)

Query: 267 ISLGAKHAALVTKEGEVFCWGEGKDGRLGHKVNMDVSCPKLVECLSGINVQSVSCGEFQT 326
           ++ G  H+ +V  +G V+ WG    G LG       S P  V+ LSG  V +V  G   +
Sbjct: 599 VAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLSG--VVAVDAGNSHS 656

Query: 327 CALTKSGEIYTWGHNNHG--ADLVGERRSRSHWLPRKLFDTLDGVRVSKVACGEWHTAIV 384
            A+   G ++TWG+N++G   D    RRS    +P ++   L GV    +A G  H  +V
Sbjct: 657 LAVRSDGTVWTWGYNSYGQLGDGTTTRRS----VPVQV-PGLSGVV--AMATGALHPLVV 709

Query: 385 STSGQLFTYGDGTFGVLGHGN 405
            + G ++ +G  +FG LG+G+
Sbjct: 710 RSDGTVWAWGYNSFGQLGNGS 730


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.131    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,739,470,302
Number of Sequences: 23463169
Number of extensions: 656298967
Number of successful extensions: 2289017
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4888
Number of HSP's successfully gapped in prelim test: 4869
Number of HSP's that attempted gapping in prelim test: 2163417
Number of HSP's gapped (non-prelim): 46775
length of query: 1030
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 877
effective length of database: 8,769,330,510
effective search space: 7690702857270
effective search space used: 7690702857270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)