Your job contains 1 sequence.
>001686
MLPGSNIEMLPNLEDGLRGQNGNLSLEDSLQTELELILQRQPDRQIVNRERDVNIYRSGS
APPTVEGSLNAVGSLFLRDNPGSICNTAAGGSGGNGDINGILSEDEIRSHPAYLSYYYSH
ENINPRLPPPLVSKEDWRVAQRFQGGGSSLGDIADWRKKGVNGGDRSSLFSMQPGISVLQ
AENDLMELRNAARRNLSRDASAEWLERGSDRLIGVPAAGLGSRRKSFADILQEGLDRPAS
LSGHLSRPASCNAYGEIVGTGIADAHRAGSCNGAESLEVLHSAAASPGLVRTKSHNRIPS
HSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVGSNVQNDIELADIA
ATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKSTADNLA
FSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSSRSVGRQQ
NANISSLDFTNVSGDYSVNQKLNSLVNHHFDTVGIGATRNLNGMVNQVALDFHSPPMDPR
YAQYLQRTSDYATRSAASASDPFAARNHFGSSLGDSDGLQKAHLELLLAQQNQQHEMQLL
GKSGGLFPGYYETQPYRLDMQYSGNTFANPVLPSVGSGSFPNERNSRFTSMMRSSMGGPM
PWHLDAGINMEGRLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAAT
AEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYG
CRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFY
GQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHG
KPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQA
MMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERR
IGLSSSVSS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001686
(1029 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043187 - symbol:PUM2 "pumilio 2" species:3702... 1591 3.9e-203 2
TAIR|locus:2043047 - symbol:PUM3 "pumilio 3" species:3702... 1597 5.4e-195 2
TAIR|locus:2076324 - symbol:PUM4 "pumilio 4" species:3702... 1712 2.8e-176 1
TAIR|locus:2043182 - symbol:PUM1 "pumilio 1" species:3702... 1613 8.7e-166 1
TAIR|locus:2087560 - symbol:PUM5 "pumilio 5" species:3702... 1136 1.2e-138 3
TAIR|locus:2117552 - symbol:PUM6 "pumilio 6" species:3702... 1054 7.3e-117 3
UNIPROTKB|E1BWC0 - symbol:PUM2 "Uncharacterized protein" ... 1034 6.4e-110 3
UNIPROTKB|F1NV23 - symbol:PUM2 "Uncharacterized protein" ... 1034 6.4e-110 3
UNIPROTKB|F1N2B8 - symbol:PUM2 "Uncharacterized protein" ... 1035 1.0e-107 2
UNIPROTKB|F1SCU6 - symbol:PUM2 "Uncharacterized protein" ... 1034 1.3e-107 2
UNIPROTKB|E2RT57 - symbol:PUM2 "Uncharacterized protein" ... 1034 1.3e-107 2
UNIPROTKB|B4E2B6 - symbol:PUM2 "Pumilio homolog 2" specie... 1034 1.3e-107 2
FB|FBgn0003165 - symbol:pum "pumilio" species:7227 "Droso... 1005 1.5e-106 3
UNIPROTKB|Q8TB72 - symbol:PUM2 "Pumilio homolog 2" specie... 1023 1.9e-106 2
RGD|1311024 - symbol:Pum2 "pumilio homolog 2 (Drosophila)... 1022 2.4e-106 2
MGI|MGI:1931751 - symbol:Pum2 "pumilio 2 (Drosophila)" sp... 1021 3.1e-106 2
DICTYBASE|DDB_G0279735 - symbol:pufA "RNA binding protein... 987 5.6e-105 3
RGD|1307190 - symbol:Pum1 "pumilio homolog 1 (Drosophila)... 1011 8.3e-104 2
UNIPROTKB|E1BE82 - symbol:PUM1 "Uncharacterized protein" ... 1004 1.7e-103 2
UNIPROTKB|F1STL2 - symbol:PUM1 "Uncharacterized protein" ... 1004 1.7e-103 2
UNIPROTKB|Q14671 - symbol:PUM1 "Pumilio homolog 1" specie... 1003 2.2e-103 2
UNIPROTKB|H0YEH2 - symbol:PUM1 "Pumilio homolog 1" specie... 1003 2.2e-103 2
UNIPROTKB|B4DG92 - symbol:PUM1 "cDNA FLJ56067, highly sim... 1003 2.2e-103 2
UNIPROTKB|E9PR38 - symbol:PUM1 "Pumilio homolog 1" specie... 1003 2.2e-103 2
UNIPROTKB|E7EWT3 - symbol:PUM1 "Pumilio homolog 1" specie... 992 7.4e-103 2
MGI|MGI:1931749 - symbol:Pum1 "pumilio 1 (Drosophila)" sp... 1000 9.5e-103 2
UNIPROTKB|E2QVA9 - symbol:PUM1 "Uncharacterized protein" ... 993 2.5e-102 2
UNIPROTKB|F6XHY4 - symbol:PUM1 "Uncharacterized protein" ... 993 2.5e-102 2
UNIPROTKB|Q2VB19 - symbol:PUM1 "Pumilio homolog 1" specie... 995 3.2e-102 2
UNIPROTKB|E9PCJ0 - symbol:PUM1 "Pumilio homolog 1" specie... 992 3.2e-102 2
UNIPROTKB|Q5T1Z4 - symbol:PUM1 "Pumilio homolog 1" specie... 992 3.2e-102 2
UNIPROTKB|Q5T1Z8 - symbol:PUM1 "Pumilio homolog 1 (Drosop... 992 3.2e-102 2
UNIPROTKB|H0YDK8 - symbol:PUM1 "Pumilio homolog 1" specie... 992 3.2e-102 2
ZFIN|ZDB-GENE-030131-2074 - symbol:pum1 "pumilio homolog ... 975 1.1e-101 2
POMBASE|SPAC1687.22c - symbol:puf3 "RNA-binding protein P... 893 3.0e-93 2
WB|WBGene00004245 - symbol:puf-9 species:6239 "Caenorhabd... 898 2.7e-92 2
ASPGD|ASPL0000000865 - symbol:AN6587 species:162425 "Emer... 769 1.5e-79 2
CGD|CAL0000998 - symbol:PUF3 species:5476 "Candida albica... 777 2.0e-79 2
SGD|S000003936 - symbol:PUF3 "Protein of the mitochondria... 714 1.1e-76 3
WB|WBGene00004244 - symbol:puf-8 species:6239 "Caenorhabd... 694 4.1e-68 1
ZFIN|ZDB-GENE-081031-76 - symbol:pum2 "pumilio homolog 2 ... 655 3.8e-61 2
ASPGD|ASPL0000057098 - symbol:AN10071 species:162425 "Eme... 530 4.7e-54 3
DICTYBASE|DDB_G0289987 - symbol:DDB_G0289987 "Pumilio hom... 540 9.1e-53 4
POMBASE|SPAC6G9.14 - symbol:SPAC6G9.14 "RNA-binding prote... 535 1.6e-52 2
UNIPROTKB|H0YC97 - symbol:PUM1 "Pumilio homolog 1" specie... 535 1.3e-50 1
GENEDB_PFALCIPARUM|PFD0825c - symbol:PFD0825c "RNA-bindin... 482 9.3e-47 2
UNIPROTKB|Q8I1R7 - symbol:PFD0825c "RNA-binding protein o... 482 9.3e-47 2
TAIR|locus:2015036 - symbol:PUM8 "pumilio 8" species:3702... 491 7.0e-46 1
TAIR|locus:2194699 - symbol:PUM7 "pumilio 7" species:3702... 482 6.5e-45 1
TAIR|locus:2167111 - symbol:PUM12 "pumilio 12" species:37... 449 9.1e-43 2
POMBASE|SPAC4G8.03c - symbol:SPAC4G8.03c "RNA-binding pro... 443 7.4e-42 2
TAIR|locus:2138258 - symbol:PUM11 "pumilio 11" species:37... 438 3.5e-40 1
DICTYBASE|DDB_G0279557 - symbol:DDB_G0279557 "pumilio RNA... 444 1.2e-39 3
UNIPROTKB|H0YDC5 - symbol:PUM1 "Pumilio homolog 1" specie... 423 1.4e-38 1
POMBASE|SPCC1682.08c - symbol:SPCC1682.08c "RNA-binding p... 426 5.7e-37 2
TAIR|locus:2011349 - symbol:PUM9 "pumilio 9" species:3702... 412 1.1e-36 1
SGD|S000002982 - symbol:PUF4 "Member of the PUF protein f... 438 1.1e-36 2
TAIR|locus:2011360 - symbol:PUM10 "pumilio 10" species:37... 403 2.0e-36 1
POMBASE|SPAC4G9.05 - symbol:mpf1 "meiotic PUF family prot... 397 3.7e-34 2
SGD|S000003146 - symbol:MPT5 "mRNA-binding protein of the... 353 5.6e-28 2
WB|WBGene00022257 - symbol:puf-11 species:6239 "Caenorhab... 312 9.2e-25 1
WB|WBGene00004239 - symbol:puf-3 species:6239 "Caenorhabd... 306 4.3e-24 1
UNIPROTKB|Q9U2G4 - symbol:puf-3 "Protein PUF-3" species:6... 306 4.3e-24 1
CGD|CAL0000028 - symbol:MPT5 species:5476 "Candida albica... 319 1.8e-23 2
CGD|CAL0004399 - symbol:orf19.5381 species:5476 "Candida ... 271 1.1e-19 1
TAIR|locus:2167771 - symbol:PUM13 "pumilio 13" species:37... 249 7.5e-18 3
WB|WBGene00004243 - symbol:puf-7 species:6239 "Caenorhabd... 247 1.5e-17 1
WB|WBGene00004242 - symbol:puf-6 species:6239 "Caenorhabd... 245 2.5e-17 1
WB|WBGene00001401 - symbol:fbf-1 species:6239 "Caenorhabd... 226 1.6e-14 3
UNIPROTKB|Q9N5M6 - symbol:fbf-1 "Fem-3 mRNA-binding facto... 226 1.6e-14 3
WB|WBGene00004241 - symbol:puf-5 species:6239 "Caenorhabd... 220 1.6e-14 2
ASPGD|ASPL0000066087 - symbol:AN7474 species:162425 "Emer... 219 8.5e-14 1
TAIR|locus:2167786 - symbol:PUM14 "pumilio 14" species:37... 202 1.6e-12 1
TAIR|locus:2144010 - symbol:PUM19 "pumilio 19" species:37... 187 1.9e-11 1
TAIR|locus:2133534 - symbol:PUM15 "pumilio 15" species:37... 189 3.4e-11 1
POMBASE|SPBP35G2.14 - symbol:SPBP35G2.14 "RNA-binding pro... 193 6.7e-11 2
TAIR|locus:2164165 - symbol:PUM18 "pumilio 18" species:37... 181 9.0e-11 1
UNIPROTKB|H0YDQ6 - symbol:PUM1 "Pumilio homolog 1" specie... 156 5.2e-10 1
TAIR|locus:2168529 - symbol:PUM16 "pumilio 16" species:37... 173 7.7e-10 1
UNIPROTKB|F1SJG9 - symbol:LOC100152831 "Uncharacterized p... 177 1.2e-09 1
POMBASE|SPBC56F2.08c - symbol:SPBC56F2.08c "RNA-binding p... 176 1.6e-09 1
MGI|MGI:106253 - symbol:D19Bwg1357e "DNA segment, Chr 19,... 172 4.2e-09 1
TAIR|locus:2144711 - symbol:PUM21 "pumilio 21" species:37... 165 1.8e-08 3
UNIPROTKB|A2VDN9 - symbol:KIAA0020 "Uncharacterized prote... 164 3.1e-08 1
ZFIN|ZDB-GENE-030131-9808 - symbol:si:ch211-241o7.5 "si:c... 161 5.8e-08 1
UNIPROTKB|Q15397 - symbol:KIAA0020 "Pumilio domain-contai... 159 1.1e-07 1
WB|WBGene00004240 - symbol:puf-4 species:6239 "Caenorhabd... 161 2.2e-07 2
CGD|CAL0000283 - symbol:orf19.4262 species:5476 "Candida ... 153 3.1e-07 1
RGD|1564753 - symbol:LOC499339 "hypothetical protein LOC4... 154 3.7e-07 1
CGD|CAL0005913 - symbol:orf19.3547 species:5476 "Candida ... 143 6.0e-06 1
WB|WBGene00001402 - symbol:fbf-2 species:6239 "Caenorhabd... 145 1.1e-05 2
SGD|S000002904 - symbol:PUF6 "Pumilio-homology domain pro... 148 1.2e-05 2
UNIPROTKB|E2RBF2 - symbol:KIAA0020 "Uncharacterized prote... 139 1.5e-05 1
TAIR|locus:2086760 - symbol:PUM24 "pumilio 24" species:37... 135 4.1e-05 1
UNIPROTKB|E1C1R5 - symbol:KIAA0020 "Uncharacterized prote... 145 5.8e-05 2
SGD|S000006246 - symbol:PUF2 "Member of the PUF protein f... 148 8.4e-05 2
POMBASE|SPCP1E11.11 - symbol:puf6 "Puf family RNA-binding... 136 0.00053 2
DICTYBASE|DDB_G0288551 - symbol:DDB_G0288551 "pumilio RNA... 134 0.00099 2
>TAIR|locus:2043187 [details] [associations]
symbol:PUM2 "pumilio 2" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0003729 "mRNA binding"
evidence=IPI] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003730 EMBL:AC004561 eggNOG:COG5099 HSSP:Q14671
HOGENOM:HOG000238460 ProtClustDB:CLSN2717398 InterPro:IPR012940
Pfam:PF07990 EMBL:AY096653 EMBL:AK226635 IPI:IPI00539996 PIR:E84693
RefSeq:NP_001189630.1 RefSeq:NP_180482.1 UniGene:At.28148
UniGene:At.48528 ProteinModelPortal:Q9ZW06 SMR:Q9ZW06 STRING:Q9ZW06
PaxDb:Q9ZW06 PRIDE:Q9ZW06 ProMEX:Q9ZW06 EnsemblPlants:AT2G29190.1
EnsemblPlants:AT2G29190.2 GeneID:817468 KEGG:ath:AT2G29190
TAIR:At2g29190 InParanoid:Q9ZW06 OMA:LAANCED PhylomeDB:Q9ZW06
Genevestigator:Q9ZW06 Uniprot:Q9ZW06
Length = 972
Score = 1591 (565.1 bits), Expect = 3.9e-203, Sum P(2) = 3.9e-203
Identities = 366/745 (49%), Positives = 471/745 (63%)
Query: 299 PS-HSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGS-RVGAVEKNGAVGSNVQND--I 354
PS +S+A+ +GSSLSR+ TP+ Q + R L P+GS RV + +K + N
Sbjct: 251 PSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGSGRVSSNDKRNTSNQSPFNGGLN 310
Query: 355 ELADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKS 414
E +D+ LSG++LS DE + Q + + + ++++ GHN+ + F +KS
Sbjct: 311 ESSDLVNALSGMNLSGSGGLDE----RGQAEQDVEKVRNYMFGLQGGHNEVNQHGFPNKS 366
Query: 415 TADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNI-LKRTSSPNLYSKMNSTGFGGSS 473
D +T + +N + S N G V + SPN Y +N+ G +
Sbjct: 367 --DQAQKATGLL----RNSQLRGAQGSTYNDGGGVATQYQHLDSPN-YC-LNNYGLNPAV 418
Query: 474 RSV-GRQQNANISSLDFTNVSGDYSVN-QKLNS-LVNHHFDTVG--IGATRNLNGMVNQV 528
S+ Q N S + N S ++ ++S L + + G + +RNL N++
Sbjct: 419 ASMMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQNLSESRNLGRFSNRM 478
Query: 529 ---ALDFHSPPMDPRYAQYLQRTSDYATRSAASASDPFAARNHFGSSLGDSDGLQKAHLE 585
S DP Y QY +D S +DP N G+S + LQ+A+L
Sbjct: 479 MGGGTGLQSHMADPMYHQY----AD----SLDLLNDPSMDVNFMGNSYMNMLELQRAYL- 529
Query: 586 LLLAQQNQQHEMQLLGKSGGLFPGYYETQPYRLDMQYSGNTFANPVLP-SVGSGSFPNER 644
Q Q+ + KSG P + Y G+ A+ +LP S+ S P R
Sbjct: 530 ---GAQKSQYGVPY--KSGS--PNSHTDYGSPTFGSYPGSPLAHHLLPNSLVSPCSPMRR 582
Query: 645 ---NSRF-TXXXXXXXXXXXXWHLDAGINMEGRLSSSLLDEFKTNKTRSFELSDIVDHVV 700
N R+ + WH+DA ++ EG SS+L+EFK+NKTR FEL++I HVV
Sbjct: 583 GEVNMRYPSATRNYAGGVMGSWHMDASLD-EG-FGSSMLEEFKSNKTRGFELAEIAGHVV 640
Query: 701 EFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQR 760
EFS+DQYGSRFIQQKLE AT++EK ++ EI+PHA LMTDVFGNYVIQKFFEHG QR
Sbjct: 641 EFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQR 700
Query: 761 AQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVI 820
+LA +L +VL LSLQMYGCRVIQKA+EVV +DQ+ +MV ELDG VM+CV DQNGNHV+
Sbjct: 701 RELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVV 760
Query: 821 QKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHV 880
QKCIEC+P++ I+FIIS+F+G VV LSTHPYGCRVIQRVLEHC D +TQ +MDEIM +
Sbjct: 761 QKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTI 820
Query: 881 CNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEE 940
LAQDQYGNYVIQHVLEHGKP ERT +I +LAG+IV+MSQQKFASNVVEKCLTFG PEE
Sbjct: 821 SMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEE 880
Query: 941 RQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKY 1000
R+ L+NEMLG+TDENEPLQAMMKD F NYVVQKVLETCDDQ ELIL RI+VHLN LKKY
Sbjct: 881 REFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKY 940
Query: 1001 TYGKHIVSRIEKLIATGERRIGLSS 1025
TYGKHIV+R+EKL+A GERR+ L S
Sbjct: 941 TYGKHIVARVEKLVAAGERRMALQS 965
Score = 397 (144.8 bits), Expect = 3.9e-203, Sum P(2) = 3.9e-203
Identities = 124/362 (34%), Positives = 180/362 (49%)
Query: 9 MLPNL-EDGLRGQNGNLSLEDSLQTELELILQRQPDRQIV--NRERDVNIYRSGSAPPTV 65
M+P L + N + S D + E+ ++L Q RQ+ ER++N+YRSGSAPPTV
Sbjct: 1 MIPELGRRPMHRGNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTV 60
Query: 66 EGSLNAVGSLFLRDNPGSICNTAAXXXXXXXXXXXXLSEDEIRSHPAYLSYYYSHENINP 125
+GS++A G LF ++E R PAYLSYYY++ +NP
Sbjct: 61 DGSVSAAGGLFSGGGGAPFLEFGGGNKGNGFGG----DDEEFRKDPAYLSYYYANMKLNP 116
Query: 126 RLPPPLVSKEDWRVAQRFQGGGSSLGDIADWRKKGVNGGDRSSLFSMQPGISVLQAENDL 185
RLPPPL+S+ED RVAQR +G + LG + D RK VN D SLFSM PG Q +
Sbjct: 117 RLPPPLMSREDLRVAQRLKGSSNVLGGVGDRRK--VN--DSQSLFSMPPGFD--QRKQHE 170
Query: 186 MELRNAARRNLSRDASAEWLERGSDRLIGVPAAGLGSRRKSFADILQEGLDRPASLSGHL 245
E+ + +S+EW G LIG+P G+G ++KSFADI Q + ++
Sbjct: 171 FEVEKTSA------SSSEWDANG---LIGLPGLGIGGKQKSFADIFQADMGHGHPVTKQP 221
Query: 246 SRPASCNAYGEIVGTGIADAHRAGSCNGAES----LEVLHSAAASPGLVRTKSHNRIPSH 301
SRPAS N + E V + + A GA S VL S+ + G ++ R+PS
Sbjct: 222 SRPASRNTFDENVDSKNNLSPSASQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSP 281
Query: 302 SF----ASAVGSSLSRSTTPEAQLVG---RSSG-----SGLPPVGSRVGAVEKNGAVGSN 349
+ V S+ R+T+ ++ G SS SG+ GS G +++ G +
Sbjct: 282 CLTPIGSGRVSSNDKRNTSNQSPFNGGLNESSDLVNALSGMNLSGS--GGLDERGQAEQD 339
Query: 350 VQ 351
V+
Sbjct: 340 VE 341
Score = 292 (107.8 bits), Expect = 2.0e-58, Sum P(2) = 2.0e-58
Identities = 71/266 (26%), Positives = 135/266 (50%)
Query: 691 ELSD-IVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQ 749
EL+D + D+V+ S YG R IQ+ +E ++K ++ E+ H + D GN+V+Q
Sbjct: 702 ELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQ 761
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH-VDQQTQMVAELDGSVM 808
K E E + S G+V+ LS YGCRVIQ+ LE H D Q++++ E+ ++
Sbjct: 762 KCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTIS 821
Query: 809 KCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANT 868
DQ GN+VIQ +E D II G++V +S + V+++ L
Sbjct: 822 MLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTF-GGPEE 880
Query: 869 QQIIMDEIM------QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQ 922
++ +++E++ + + + +DQ+ NYV+Q VLE +R ++ ++ + + +
Sbjct: 881 REFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKY 940
Query: 923 KFASNVVEKCLTFGSPEERQLLINEM 948
+ ++V + + ER++ + +
Sbjct: 941 TYGKHIVARVEKLVAAGERRMALQSL 966
Score = 100 (40.3 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 27/132 (20%), Positives = 62/132 (46%)
Query: 678 LLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA-- 735
+L+ K ++ R+ + ++ +V+ S ++ S +++ L EE+ + E++
Sbjct: 836 VLEHGKPDE-RTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDE 894
Query: 736 ----RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVV 791
+ +M D F NYV+QK E + QR + ++ H+ L YG ++ + ++V
Sbjct: 895 NEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLV 954
Query: 792 HVDQQTQMVAEL 803
++ + L
Sbjct: 955 AAGERRMALQSL 966
Score = 56 (24.8 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 705 DQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLA 764
DQ+ + +Q+ LE +++ I I H L +G +++ + + +R
Sbjct: 904 DQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMAL 963
Query: 765 SQLT 768
LT
Sbjct: 964 QSLT 967
Score = 42 (19.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 294 SHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVG 347
SH S +F S GS L+ P + LV S V R + +N A G
Sbjct: 547 SHTDYGSPTFGSYPGSPLAHHLLPNS-LVSPCSPMRRGEVNMRYPSATRNYAGG 599
>TAIR|locus:2043047 [details] [associations]
symbol:PUM3 "pumilio 3" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0003729 "mRNA binding" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005886 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003729
EMBL:AC004561 eggNOG:COG5099 HSSP:Q14671 HOGENOM:HOG000238460
ProtClustDB:CLSN2717398 InterPro:IPR012940 Pfam:PF07990
IPI:IPI00542656 PIR:A84693 RefSeq:NP_180478.1 UniGene:At.46280
ProteinModelPortal:Q9ZW02 SMR:Q9ZW02 PaxDb:Q9ZW02 PRIDE:Q9ZW02
EnsemblPlants:AT2G29140.1 GeneID:817463 KEGG:ath:AT2G29140
TAIR:At2g29140 InParanoid:Q9ZW02 OMA:MYENASA PhylomeDB:Q9ZW02
Genevestigator:Q9ZW02 Uniprot:Q9ZW02
Length = 964
Score = 1597 (567.2 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 364/746 (48%), Positives = 475/746 (63%)
Query: 299 PS-HSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGS-RVGAVEKNGAVGSNVQNDI-- 354
PS + +A+ +GSSLSR+ TP+ Q + R L P+GS RV + +K + N +
Sbjct: 239 PSPYCYAAVLGSSLSRNGTPDPQGIARVPSPCLTPIGSGRVSSNDKRNTSNQSPFNGVTS 298
Query: 355 ---ELADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFM 411
E +D+ LSGL+LS DE + Q + + + ++++ +GHN+ F
Sbjct: 299 GLNESSDLVNALSGLNLSGTGGLDE----RGQAEQDVEKVRNYMFGLQDGHNEVNPHGFP 354
Query: 412 DKSTADNLAFSTHYIDFTRKNGIVPNLNASAINS-NGQVNILKRTSSPNLYSKMNSTGFG 470
++S + A T + +N + SA NS +G N + SPN Y+ +N
Sbjct: 355 NRS---DQARGTA----SCRNSQMRGSQGSAYNSGSGVANPYQHHDSPNYYA-LNPAVAS 406
Query: 471 GSSRSVGRQQNANISSLDFTNVSGDYSVNQKLNSLVNHHFDTVG--IGATRNLNGMVNQV 528
+ +G N S + + N S + + L F + G + +RN+ + N++
Sbjct: 407 MMANQLGTN---NYSPM-YENASATLGYSAMDSRLHGGSFVSSGQNLSESRNIGRVGNRM 462
Query: 529 ALDFHSPPM---DPRYAQYLQRTSDYATRSAASASDPFAARNHFGSSLGDSDGLQKAHLE 585
P DP Y QY R S+ A S +DP RN +G+S + +Q+A+L
Sbjct: 463 MEGGTGHPSHLADPMYHQYA-RFSENAD-SFDLLNDPSMDRN-YGNSYMNMLEIQRAYL- 518
Query: 586 LLLAQQNQQHEMQLLGKSGGLFP-GYYETQPYRLDMQYSGNTFANPVLP-SVGSGSFPNE 643
Q Q+ + KSG YY + + +M Y G+ A+ +P S+ S P
Sbjct: 519 ---GSQKSQYGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMR 573
Query: 644 R---NSRFTXXXXXXXXXXX-XWHLDAGINMEGRLSSSLLDEFKTNKTRSFELSDIVDHV 699
R N R+ WH+DA ++ EG SS+L+EFK+NKTR FELS+I HV
Sbjct: 574 RGEVNMRYPAATRNYTGGVMGSWHMDASLD-EG-FGSSMLEEFKSNKTRGFELSEIAGHV 631
Query: 700 VEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQ 759
VEFS+DQYGSRFIQQKLE AT +EK ++ EI+P A LMTDVFGNYVIQKFFEHG Q
Sbjct: 632 VEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQ 691
Query: 760 RAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHV 819
R +L +L +VL LSLQMYGCRVIQKA+EVV +DQ+ QMV ELDG VM+CV DQNGNHV
Sbjct: 692 RRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHV 751
Query: 820 IQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQH 879
+QKCIEC+P++ I+FIIS+F+G VV LSTHPYGCRVIQRVLEHC + +TQ +M+EI+
Sbjct: 752 VQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILST 811
Query: 880 VCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPE 939
V L QDQYGNYV+QHVLEHGKP ERT +I +LAG+IV+MSQQKFASNVVEKCLTFG PE
Sbjct: 812 VSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 871
Query: 940 ERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKK 999
ER+LL+NEMLG+TDENEPLQAMMKD F NYVVQKVLETCDDQ ELIL+RI+VHLN LKK
Sbjct: 872 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKK 931
Query: 1000 YTYGKHIVSRIEKLIATGERRIGLSS 1025
YTYGKHIV+R+EKL+A GERR+ L S
Sbjct: 932 YTYGKHIVARVEKLVAAGERRMALQS 957
Score = 314 (115.6 bits), Expect = 5.4e-195, Sum P(2) = 5.4e-195
Identities = 110/345 (31%), Positives = 158/345 (45%)
Query: 9 MLPNL-EDGLRGQNGNLSLEDSLQTELELILQRQPDRQIV--NRERDVNIYRSGSAPPTV 65
M+P L + N + S D + E+ ++L Q RQ+ ER++N+YRSGSAPPTV
Sbjct: 2 MIPELGRRPMHRGNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTV 61
Query: 66 EGSLNAVGSLFLRDNPGSICNTAAXXXXXXXXXXXXLSEDEIRSHPAYLSYYYSHENINP 125
+GSL+A G LF S ++E R PAYLSYYY++ +NP
Sbjct: 62 DGSLSAAGGLFSGGGGASFLEFGGVNKGNGFGG----DDEEFRKDPAYLSYYYANMKLNP 117
Query: 126 RLPPPLVSKEDWRVAQRFQGGGSSLGDIADWRKKGVNGGDRSSLFSMQPGISVLQAENDL 185
RLPPPL+S+ED RVAQR +G + LG + D RK VN D SLFSM PG +
Sbjct: 118 RLPPPLMSREDLRVAQRLKGSNNVLGGVGDRRK--VN--DSRSLFSMPPGFEAGKPGASA 173
Query: 186 MELRNAARRNLSRDASAEWLERGSDRLIGVPAAGLGSRRKSFADILQEGLDRPASLSGHL 245
E L + +G P SR S + E +D +LS
Sbjct: 174 SEWDANGLIGLGLGGKQKSFADIFQADMGHPVVQQPSRPAS-RNTFDENVDSNNNLSPSA 232
Query: 246 SR---PASCNAYGEIVGTGIADAHRAGSCNGAESLEVLHSAAASP---GLVRTKSHNRIP 299
S+ S Y ++G+ ++ R G+ + + + + S +P G V +
Sbjct: 233 SQGIGAPSPYCYAAVLGSSLS---RNGTPD-PQGIARVPSPCLTPIGSGRVSSNDKRNTS 288
Query: 300 SHSFASAVGSSLSRSTTPEAQLVGRS-SGSG-LPPVGSRVGAVEK 342
+ S + V S L+ S+ L G + SG+G L G VEK
Sbjct: 289 NQSPFNGVTSGLNESSDLVNALSGLNLSGTGGLDERGQAEQDVEK 333
Score = 306 (112.8 bits), Expect = 8.6e-51, Sum P(2) = 8.6e-51
Identities = 72/266 (27%), Positives = 137/266 (51%)
Query: 691 ELSD-IVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQ 749
EL + ++D+V+ S YG R IQ+ +E ++K ++ E+ H + D GN+V+Q
Sbjct: 694 ELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQ 753
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH-VDQQTQMVAELDGSVM 808
K E E + S GHV+ LS YGCRVIQ+ LE H D Q++++ E+ +V
Sbjct: 754 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVS 813
Query: 809 KCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANT 868
DQ GN+V+Q +E D II G++V +S + V+++ L
Sbjct: 814 MLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTF-GGPEE 872
Query: 869 QQIIMDEIM------QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQ 922
++++++E++ + + + +DQ+ NYV+Q VLE +R ++T++ + + +
Sbjct: 873 RELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKY 932
Query: 923 KFASNVVEKCLTFGSPEERQLLINEM 948
+ ++V + + ER++ + +
Sbjct: 933 TYGKHIVARVEKLVAAGERRMALQSL 958
Score = 209 (78.6 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 58/234 (24%), Positives = 112/234 (47%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKF 751
+ ++ HV+ DQ G+ +Q+ +E E I H TL T +G VIQ+
Sbjct: 732 VKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRV 791
Query: 752 FEH-GTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKC 810
EH ++++ ++ V L+ YG V+Q LE D++T ++ EL G +++
Sbjct: 792 LEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQM 851
Query: 811 VHDQNGNHVIQKCIECI-PQDRIQFIISSFYGQ------VVALSTHPYGCRVIQRVLEHC 863
+ ++V++KC+ P++R + +++ G + A+ + V+Q+VLE C
Sbjct: 852 SQQKFASNVVEKCLTFGGPEER-ELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETC 910
Query: 864 DDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIV 917
DD +++I+ I H+ L + YG +++ V + ER + L +V
Sbjct: 911 DDQQ-RELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSLPQPLV 963
Score = 102 (41.0 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 27/132 (20%), Positives = 63/132 (47%)
Query: 678 LLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA-- 735
+L+ K ++ R+ + ++ +V+ S ++ S +++ L EE+ + E++
Sbjct: 828 VLEHGKPDE-RTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDE 886
Query: 736 ----RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVV 791
+ +M D F NYV+QK E + QR + +++ H+ L YG ++ + ++V
Sbjct: 887 NEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLV 946
Query: 792 HVDQQTQMVAEL 803
++ + L
Sbjct: 947 AAGERRMALQSL 958
>TAIR|locus:2076324 [details] [associations]
symbol:PUM4 "pumilio 4" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0003729 "mRNA binding" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003729 EMBL:AC009400
eggNOG:COG5099 HSSP:Q14671 HOGENOM:HOG000238460 InterPro:IPR012940
Pfam:PF07990 EMBL:AK117911 EMBL:BT005311 IPI:IPI00525853
RefSeq:NP_187647.2 UniGene:At.27627 UniGene:At.48643
ProteinModelPortal:Q9SS47 SMR:Q9SS47 PaxDb:Q9SS47 PRIDE:Q9SS47
EnsemblPlants:AT3G10360.1 GeneID:820198 KEGG:ath:AT3G10360
TAIR:At3g10360 InParanoid:Q9SS47 OMA:FKNNKTR PhylomeDB:Q9SS47
Genevestigator:Q9SS47 Uniprot:Q9SS47
Length = 1003
Score = 1712 (607.7 bits), Expect = 2.8e-176, P = 2.8e-176
Identities = 364/601 (60%), Positives = 428/601 (71%)
Query: 432 NGIVPNLNASAINSNGQVNILKRTSSP-NLYSKMNSTGFGGSSRSVGRQQNANISSLDFT 490
+G +L AS + S+GQVNI KRTSS +LYS + + G S +N NI+ DF+
Sbjct: 417 SGYGASLGASTVGSHGQVNIPKRTSSSASLYSTSDHSRLGSVGLSDVNIRNGNINGTDFS 476
Query: 491 NVSGDYSVNQKLNSLVNHHFDTVGIGATRNLNGM-VNQVALDFHSPPMDPRYAQYLQRTS 549
G Y KLNSL H + G T + + +N++ S P + +
Sbjct: 477 TAGG-YMAKNKLNSLAEH-YSAEGSHLTGDGDRQSLNRLINQVASELHSPVMDPHYSQYL 534
Query: 550 DYATRSAASASDPFAARNHFGSSLGDSDGLQKAHLELLLAQQNQQHEMQLLGKSGGLFPG 609
A+ +AA D RN+FG+S GD+ +L +LLAQ QQ LG
Sbjct: 535 HTASSTAAPI-DHSLIRNNFGTSNGDT---ANEYLAMLLAQNRQQ-----LGNLNAANSR 585
Query: 610 YYETQPYRLDMQYSGNTFANPVLPSVGSGSFPNERNSRFTXXXXX-XXXXXXXWHLDAGI 668
++E+ Y L Y GN +P S S +F N R S+ H+D G
Sbjct: 586 FFESPSYDLGNMYLGNHLPSP---SKNSRNFQNMRMSQSASMMKVPFGGLQGSSHVDIGS 642
Query: 669 NMEGRLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIF 728
E +SLL+ FK NKTRS ELS+IV HV+EFS DQYGSRFIQQKLE AT EEK IF
Sbjct: 643 TAE----ASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIF 698
Query: 729 PEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKAL 788
PEI+P+ RTLMTDVFGNYVIQKFFEHGT QR +LA Q+TGHVL LSLQMYGCRVIQKAL
Sbjct: 699 PEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKAL 758
Query: 789 EVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALST 848
EVV ++QQ +MV ELDGSVMKCVHDQNGNHVIQKCIE +PQD IQFIISSFYG+V+ALST
Sbjct: 759 EVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALST 818
Query: 849 HPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTV 908
HPYGCRVIQRVLEH DD TQ+IIM+EIM VC LAQDQYGNYVIQH+++HGKPHER+ +
Sbjct: 819 HPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEI 878
Query: 909 ITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGN 968
I +LAGQIV+MSQQKFASNVVEKCLTFG PEERQ+L+NEMLG TDENEPLQAMMKDPFGN
Sbjct: 879 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 938
Query: 969 YVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIGLSSSVS 1028
YVVQKVLETCDDQSL LILSRI+VHLN LK+YTYGKHIV+R+EKLI TGERRIGLSSS++
Sbjct: 939 YVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGERRIGLSSSLA 998
Query: 1029 S 1029
+
Sbjct: 999 A 999
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 254/586 (43%), Positives = 346/586 (59%)
Query: 1 MLPGSNIEMLPNLEDGLRGQNGNLSLEDSLQTELELILQRQPDRQIVNRER--DVNIYRS 58
M+ S ++ NL RG N + LED Q ELE +LQ+ ++Q RER D++++RS
Sbjct: 1 MVTNSYMDTRSNLTSVNRGSN--VDLEDRFQRELESLLQQHRNQQSFGRERERDIDVHRS 58
Query: 59 GSAPPTVEGSLNAVGSLFLRDNPGSICNTAAXXXXXXXXXXXXLSEDEIRSHPAYLSYYY 118
GSAPPTVEG L A+ + +L +N + LS+DE+R HP YLSYYY
Sbjct: 59 GSAPPTVEGLLRAMDNQYLNNNNSDHRDVGNISSITTSNGVELLSDDELRWHPEYLSYYY 118
Query: 119 SHENINPRLPPPLVSKEDWRVAQRFQGGGSSLGDIADWRKKGVNGGDRSSLFSMQPGISV 178
S+E+ NPRLPPPL+S+EDWRVAQRF S + +WRKK V + SSLFS+QPG+ V
Sbjct: 119 SNEHSNPRLPPPLLSREDWRVAQRFHNSESVFDPVGEWRKKTVEVDNSSSLFSVQPGVPV 178
Query: 179 LQAENDLMELRNAARRNLSRDASAEWLERGSDRLIGVPA-AGLGSRRKSFADILQEGLDR 237
QAENDLMELRNA + R + L++G + LIG+ +GLG RRKSFADILQEGL+R
Sbjct: 179 EQAENDLMELRNAVAQG--RSQKVQRLDQGREDLIGLSGYSGLGPRRKSFADILQEGLER 236
Query: 238 PASLSGHLSRPASCNAYGEIVGTGIADAHRAGSCNGAESLEVLHSAAASPGLVRTKSHNR 297
A+L LSRPASCN + ++ + AG G +S H + S T ++
Sbjct: 237 DAALGSQLSRPASCNTFRDMKDAAVLSNFSAG---GFDSPLAFHDSLHS-----TAKNS- 287
Query: 298 IPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVGSNVQN--DIE 355
P+ S + S + R+ TP++ LVGRS+ SGLPP+G+RVG VEK G+ +QN
Sbjct: 288 -PNTMLGSTMSSPVPRNRTPDSHLVGRSTASGLPPIGTRVGPVEKKNTFGTAIQNCESYT 346
Query: 356 LADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKST 415
AD+A TLS L++S + E +H+QSQLQ+ +NQSD + NGH ++++QQ T
Sbjct: 347 AADVADTLSRLNMSEMSQVKE-NHMQSQLQVELENQSDVMRYIPNGHKKALRQQ-NTAET 404
Query: 416 ADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSP-NLYSKMNSTGFGGSSR 474
D+L FS +Y + G +L AS + S+GQVNI KRTSS +LYS + + G
Sbjct: 405 KDHL-FSANYGGMS---GYGASLGASTVGSHGQVNIPKRTSSSASLYSTSDHSRLGSVGL 460
Query: 475 SVGRQQNANISSLDFTNVSGDYSVNQKLNSLVNHHF----DTVGIGATRNLNGMVNQVAL 530
S +N NI+ DF+ G Y KLNSL H+ G G ++LN ++NQVA
Sbjct: 461 SDVNIRNGNINGTDFSTAGG-YMAKNKLNSLAEHYSAEGSHLTGDGDRQSLNRLINQVAS 519
Query: 531 DFHSPPMDPRYAQYLQRTSDYATRSAASASDPFAARNHFGSSLGDS 576
+ HSP MDP Y+QYL S S A+ D RN+FG+S GD+
Sbjct: 520 ELHSPVMDPHYSQYLHTAS-----STAAPIDHSLIRNNFGTSNGDT 560
>TAIR|locus:2043182 [details] [associations]
symbol:PUM1 "pumilio 1" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003729 EMBL:AC004561 eggNOG:COG5099 HSSP:Q14671
IPI:IPI00536716 PIR:F84693 RefSeq:NP_180483.1 UniGene:At.38509
ProteinModelPortal:Q9ZW07 SMR:Q9ZW07 STRING:Q9ZW07 PaxDb:Q9ZW07
PRIDE:Q9ZW07 EnsemblPlants:AT2G29200.1 GeneID:817469
KEGG:ath:AT2G29200 TAIR:At2g29200 HOGENOM:HOG000238460
InParanoid:Q9ZW07 OMA:DQAHKAT PhylomeDB:Q9ZW07
ProtClustDB:CLSN2717398 Genevestigator:Q9ZW07 InterPro:IPR012940
Pfam:PF07990 Uniprot:Q9ZW07
Length = 968
Score = 1613 (572.9 bits), Expect = 8.7e-166, P = 8.7e-166
Identities = 372/752 (49%), Positives = 480/752 (63%)
Query: 299 PS-HSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGS-RVGAVEKNGAVGSNVQNDI-- 354
PS +S+A+ +GSSLSR+ TP+ Q + R L P+GS R+ + +K + N +
Sbjct: 243 PSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGSGRMSSNDKRNTSNQSPFNGVTS 302
Query: 355 ---ELADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFM 411
E +D+ LSGL+LS D+ +SQ + + + ++++ GHN+ + +F
Sbjct: 303 GLNESSDLVNALSGLNLSCSVGLDD----RSQAEQDVEKVRNYMFGLQGGHNEVNQHEFP 358
Query: 412 DKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSN-GQVNILKRTSSPNLYSKMNSTGFG 470
+KS H + +N + + SA N G N ++ SPN Y +N+
Sbjct: 359 NKSD------QAHKATGSLRNSQLRGPHGSAYNGGVGLANPYQQLDSPN-YC-LNNYALN 410
Query: 471 GSSRSVGRQQ--NANISSLDFTNVSG-DYSVNQKLNSLVNHH---FDTVG--IGATRNLN 522
+ S+ Q N N + + + NVS +S ++S HH F + G + +RNL
Sbjct: 411 PAVASMMANQLGNNNFAPM-YDNVSALGFS---GMDS--RHHGRGFVSSGQNLSESRNLG 464
Query: 523 GMVNQV---ALDFHSPPMDPRYAQYLQRTSDYATRSAASASDPFAARNHFG-SSLGDSDG 578
N++ S +DP Y QY +D S +DP RN G SS D
Sbjct: 465 RFSNRMMGGGAGLQSHMVDPMYNQY----AD----SLDLLNDPSMDRNFMGGSSYMDMLE 516
Query: 579 LQKAHLELLLAQQNQQHEMQLLGKSGGLFPGYYETQPYRLDMQYSGNTFANPVLP-SVGS 637
LQ+A+L AQ++Q G YY + + +M Y G+ A+ +P S+ S
Sbjct: 517 LQRAYLG---AQKSQYGVPYKSGSPNS--HSYYGSPTFGSNMSYPGSPLAHHGMPNSLMS 571
Query: 638 GSFPNER---NSRF-TXXXXXXXXXXXXWHLDAGINMEGRLSSSLLDEFKTNKTRSFELS 693
P R N RF + WH+DA + EG SS+L+EFK+NKTR FELS
Sbjct: 572 PYSPMRRDEVNMRFPSATRNYSGGLMGSWHMDASFD-EG-FGSSMLEEFKSNKTRGFELS 629
Query: 694 DIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFE 753
+I HVVEFS+DQYGSRFIQQKLE AT +EK ++ EI+P A LMTDVFGNYVIQKFFE
Sbjct: 630 EIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFE 689
Query: 754 HGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHD 813
HG QR +LA +L HVL LSLQMYGCRVIQKA+EVV +DQ+ +MV ELDG VM+CV D
Sbjct: 690 HGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRD 749
Query: 814 QNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIM 873
QNGNHV+QKCIEC+P++ I+FIIS+F+G VV LSTHPYGCRVIQRVLEHC D +TQ +M
Sbjct: 750 QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVM 809
Query: 874 DEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCL 933
+EI+ V LAQDQYGNYV+QHVLEHGKP ERT +I +LAG+IV+MSQQKFASNVVEKCL
Sbjct: 810 EEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCL 869
Query: 934 TFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVH 993
TFG PEER+LL+NEMLG+TDENEPLQAMMKD F NYVVQKVLETCDDQ ELIL+RI+VH
Sbjct: 870 TFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVH 929
Query: 994 LNVLKKYTYGKHIVSRIEKLIATGERRIGLSS 1025
L LKKYTYGKH+V+RIEKL+A GERR+ L S
Sbjct: 930 LTALKKYTYGKHVVARIEKLVAAGERRMALQS 961
Score = 315 (115.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 74/266 (27%), Positives = 137/266 (51%)
Query: 691 ELSD-IVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQ 749
EL++ + DHV+ S YG R IQ+ +E ++K ++ E+ H + D GN+V+Q
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQ 757
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH-VDQQTQMVAELDGSVM 808
K E E + S GHV+ LS YGCRVIQ+ LE H D Q++++ E+ +V
Sbjct: 758 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVS 817
Query: 809 KCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANT 868
DQ GN+V+Q +E D II G++V +S + V+++ L
Sbjct: 818 MLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTF-GGPEE 876
Query: 869 QQIIMDEIM------QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQ 922
++++++E++ + + + +DQ+ NYV+Q VLE +R ++T++ + + +
Sbjct: 877 RELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKY 936
Query: 923 KFASNVVEKCLTFGSPEERQLLINEM 948
+ +VV + + ER++ + +
Sbjct: 937 TYGKHVVARIEKLVAAGERRMALQSL 962
Score = 306 (112.8 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 148/514 (28%), Positives = 223/514 (43%)
Query: 9 MLPNL-EDGLRGQNGNLSLEDSLQTELELILQRQPDRQIV--NRERDVNIYRSGSAPPTV 65
M+P L + N + S D + E+ ++L Q RQ+ ER++N++RSGSAPPTV
Sbjct: 1 MIPELGRRPMHRGNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLFRSGSAPPTV 60
Query: 66 EGSLNAVGSLFLRDNPGSICNTAAXXXXXXXXXXXXLSEDEIRSHPAYLSYYYSHENINP 125
+GS++A G LF ++E R PAYLSYYY++ +NP
Sbjct: 61 DGSVSAAGGLFSGGGGAPFLEFGGVNKGNGFGG----DDEEFRKDPAYLSYYYANMKLNP 116
Query: 126 RLPPPLVSKEDWRVAQRFQGGGSSLGDIADWRKKGVNGGDRSSLFSMQPGIS-----VLQ 180
RLPPPL+S+ED RVAQR +G + LG + D RK VN D SLFSM PG
Sbjct: 117 RLPPPLMSREDLRVAQRLKGSNNVLGGVGDRRK--VN--DNRSLFSMPPGFEGEKTGASA 172
Query: 181 AENDLMELRNAARRNLS--RDASAEWLERGSDRLIGVPAAGLGSRRKSFADILQEGLDRP 238
+E D L L + + A+ + +D G P A SR S + E +D
Sbjct: 173 SEWDANGLIGLPGLGLGGKQKSFADIFQ--ADMGHGHPVAQQPSRPAS-RNTFDENVDSN 229
Query: 239 ASLSGHLSR---PASCNAYGEIVGTGIADAHRAGSCNGAESLEVLHSAAASP-GLVRTKS 294
+LS S+ S +Y ++G+ ++ R G+ + +++ + S +P G R S
Sbjct: 230 NNLSPSASQGIGAPSPYSYAAVLGSSLS---RNGTPD-PQAIARVPSPCLTPIGSGRMSS 285
Query: 295 HNR--IPSHSFASAVGSSLSRSTTPEAQLVGR--SSGSGLPPVGSRVGAVEK--N---GA 345
+++ + S + V S L+ S+ L G S GL VEK N G
Sbjct: 286 NDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDDRSQAEQDVEKVRNYMFGL 345
Query: 346 VGS-NVQNDIEL---ADIAATLSGLSLSNIR-HADEVSHVQSQLQL-NPDNQSDFLYDTS 399
G N N E +D A +G SL N + S + L NP Q D
Sbjct: 346 QGGHNEVNQHEFPNKSDQAHKATG-SLRNSQLRGPHGSAYNGGVGLANPYQQLDSPNYCL 404
Query: 400 NGH--NQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSS 457
N + N ++ ++ +N A + +G+ + S+GQ N+ + +
Sbjct: 405 NNYALNPAVASMMANQLGNNNFAPMYDNVSALGFSGMDSRHHGRGFVSSGQ-NLSESRNL 463
Query: 458 PNLYSKMNSTGFGGSSRSVGRQQNANISSLDFTN 491
++M G G S V N SLD N
Sbjct: 464 GRFSNRMMGGGAGLQSHMVDPMYNQYADSLDLLN 497
Score = 104 (41.7 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 28/132 (21%), Positives = 63/132 (47%)
Query: 678 LLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA-- 735
+L+ K ++ R+ + ++ +V+ S ++ S +++ L EE+ + E++
Sbjct: 832 VLEHGKPDE-RTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDE 890
Query: 736 ----RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVV 791
+ +M D F NYV+QK E + QR + +++ H+ L YG V+ + ++V
Sbjct: 891 NEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLV 950
Query: 792 HVDQQTQMVAEL 803
++ + L
Sbjct: 951 AAGERRMALQSL 962
Score = 58 (25.5 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 705 DQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLA 764
DQ+ + +Q+ LE +++ I I H L +G +V+ + + +R
Sbjct: 900 DQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLVAAGERRMAL 959
Query: 765 SQLT 768
LT
Sbjct: 960 QSLT 963
>TAIR|locus:2087560 [details] [associations]
symbol:PUM5 "pumilio 5" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005773 "vacuole" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0005829
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003729
EMBL:AP000383 eggNOG:COG5099 HSSP:Q14671 HOGENOM:HOG000238460
EMBL:AK228410 EMBL:BX824276 IPI:IPI00527056 IPI:IPI00972845
RefSeq:NP_188660.3 UniGene:At.38266 ProteinModelPortal:Q9LJX4
SMR:Q9LJX4 STRING:Q9LJX4 PaxDb:Q9LJX4 PRIDE:Q9LJX4
EnsemblPlants:AT3G20250.1 GeneID:821569 KEGG:ath:AT3G20250
TAIR:At3g20250 InParanoid:Q9LJX4 OMA:QHKYASN PhylomeDB:Q9LJX4
Genevestigator:Q9LJX4 Uniprot:Q9LJX4
Length = 961
Score = 1136 (405.0 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 243/488 (49%), Positives = 310/488 (63%)
Query: 537 MDPRYAQYLQRTSDYATRSAASASDPF-AARNHFGSSLGDSDGLQKAHLELLLAQQNQQH 595
+DP QY Q+ + + PF ++ + FG + G H E L + + +
Sbjct: 471 VDPFQLQYFQQAQ------VDAYAPPFQSSTDSFGQKDQQAVGYMANH-EPLNSPLSPGY 523
Query: 596 EMQLLGKSGGLFPGYYETQP-YRLDMQYSGNTFANPVLPS--VGS--GSFPNERNSRFTX 650
+Q G Y+ P R+ QY G+ A+PV+PS VG F +R+
Sbjct: 524 GLQSPRHMGN----YFAVPPGVRVMPQYPGSPLASPVMPSSPVGGMMSHFGRRSETRYHQ 579
Query: 651 XXXXXXXXXX--XWHLDAG--INMEGRLSS-SLLDEFKTNKTRSFELSDIVDHVVEFSTD 705
W + G ++ L S LDE K+ R ELSDI VVEFS D
Sbjct: 580 QGPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVD 639
Query: 706 QYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLAS 765
Q+GSRFIQQKLE + EEK +F E++P A LMTDVFGNYVIQKF EHGT +QR +L
Sbjct: 640 QHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVK 699
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
QL G ++ LSLQMYGCRVIQKALEV+ VDQ+T+++ ELDG+V+KCV DQNGNHVIQKCIE
Sbjct: 700 QLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIE 759
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
+P RI F+I++F GQV LSTHPYGCRVIQR+LEHC D I+DEI++ LA
Sbjct: 760 SMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAH 819
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQYGNYV QHVLE GKP ER +I +L G +V+MSQ K+ASNVVEKCL ER+ LI
Sbjct: 820 DQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLI 879
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E++G ++E+ L AMMKD F NYVVQKVLE DQ E+++ R+++HL L+KYTYGKH
Sbjct: 880 EEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKH 939
Query: 1006 IVSRIEKL 1013
IV+R E+L
Sbjct: 940 IVARFEQL 947
Score = 191 (72.3 bits), Expect = 1.4e-27, Sum P(5) = 1.4e-27
Identities = 55/223 (24%), Positives = 110/223 (49%)
Query: 800 VAELDGSVMKCVHDQNGNHVIQKCIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQR 858
++++ G V++ DQ+G+ IQ+ +E C +++ + S Q L T +G VIQ+
Sbjct: 626 LSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKAS-VFSEVLPQASKLMTDVFGNYVIQK 684
Query: 859 VLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVR 918
+EH A ++++ ++ + +L+ YG VIQ LE ++T +I +L G +++
Sbjct: 685 FIEHGTPAQREELVK-QLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLK 743
Query: 919 MSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETC 978
+ + ++V++KC+ P R I ++ + + + P+G V+Q++LE C
Sbjct: 744 CVRDQNGNHVIQKCIE-SMPAGR---IGFVIAAF--RGQVATLSTHPYGCRVIQRILEHC 797
Query: 979 -DDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERR 1020
DD+ I+ I L YG ++ + + ERR
Sbjct: 798 SDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERR 840
Score = 189 (71.6 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 48/126 (38%), Positives = 70/126 (55%)
Query: 57 RSGSAPPTVEGSLNAVGSLFLRDNPGSICNTAAXXXXXXXXXXXXLSEDEIRSHPAYLSY 116
RS SAPP++EGS A+ +L L+ GS + SE+EIRS PAY++Y
Sbjct: 59 RSESAPPSMEGSFAALRNL-LKQQEGSSSEVLSRAIENYD------SEEEIRSDPAYVAY 111
Query: 117 YYSHENINPRLPPPLVSKEDWRVAQRFQGGGSSLGDIADWRKKGVNGGDRSSLFSMQPGI 176
Y S+ N+NPRLPPPL+S+E+ + + F G ++ W G+ RSSL S + +
Sbjct: 112 YLSNINLNPRLPPPLISRENQHLLRHF--GDNNQSPTTSWDNMGI----RSSLHSSRTAL 165
Query: 177 SVLQAE 182
S + E
Sbjct: 166 STHREE 171
Score = 161 (61.7 bits), Expect = 1.6e-24, Sum P(5) = 1.6e-24
Identities = 45/166 (27%), Positives = 83/166 (50%)
Query: 860 LEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRM 919
L+ N +++ + +I V + DQ+G+ IQ LEH E+ +V +++ Q ++
Sbjct: 613 LDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKL 672
Query: 920 SQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCD 979
F + V++K + G+P +R+ L+ ++ G + ++ +G V+QK LE D
Sbjct: 673 MTDVFGNYVIQKFIEHGTPAQREELVKQLAGQ------MVSLSLQMYGCRVIQKALEVID 726
Query: 980 -DQSLELILSRIRVHLNVLK--KYTYGKHIVSRIEKLIATGERRIG 1022
DQ ELI + NVLK + G H++ + + + G RIG
Sbjct: 727 VDQKTELIRE---LDGNVLKCVRDQNGNHVIQKCIESMPAG--RIG 767
Score = 68 (29.0 bits), Expect = 1.2e-138, Sum P(3) = 1.2e-138
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 218 AGLGSRRKSFADILQEGLDRPASLSGHLSRPAS 250
A L RRKS AD++QE D P +LS RP S
Sbjct: 185 ASLAGRRKSIADMIQE--DFPLTLSSVFKRPHS 215
Score = 49 (22.3 bits), Expect = 1.4e-27, Sum P(5) = 1.4e-27
Identities = 19/89 (21%), Positives = 34/89 (38%)
Query: 622 YSGNTFANPVLPSVGSGSFPNERNSRFTXXXXXXXXXXXXWHLDAGINMEGRLSSSLLDE 681
Y G A+ ++P SG +E L G++ G+ SL+D
Sbjct: 414 YGGYPPASGIVPQYMSGYPSHEATVPMPYDISSTSSGYNNPRLLPGVSSSGQNIPSLVDP 473
Query: 682 FKTNKTRSFELSDIVDHVVEFSTDQYGSR 710
F+ + ++ D + STD +G +
Sbjct: 474 FQLQYFQQAQV-DAYAPPFQSSTDSFGQK 501
Score = 45 (20.9 bits), Expect = 3.6e-27, Sum P(4) = 3.6e-27
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 607 FPGYYETQPYRLDMQYSGNTFANP-VLPSVGS 637
+P + T P D+ + + + NP +LP V S
Sbjct: 431 YPSHEATVPMPYDISSTSSGYNNPRLLPGVSS 462
Score = 43 (20.2 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 111 PAYLSYYYSHENINPRLPPPLVSKEDWRVAQRFQGGGSSLG 151
P Y+S Y SHE P +P + S R G SS G
Sbjct: 425 PQYMSGYPSHEATVP-MPYDISSTSSGYNNPRLLPGVSSSG 464
Score = 43 (20.2 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 380 VQSQLQLNPDNQSDFLYDTSNGHNQSMKQ 408
VQ L+++ D Q + L H QS+++
Sbjct: 905 VQKVLEISKDQQREILVQRMKIHLQSLRK 933
Score = 42 (19.8 bits), Expect = 1.4e-27, Sum P(5) = 1.4e-27
Identities = 22/78 (28%), Positives = 29/78 (37%)
Query: 559 ASDPFAARNHFGSSLGDSDGLQKAHLELLLAQQNQQHEMQLLGKSGGLFPGYYETQPYRL 618
+SD A+ + F + L S A E L A+Q HE L G P ++ R
Sbjct: 258 SSDAIASEDPFTTDLA-SQSFTNAQTERLNARQ-ASHEDNNLSVFGASPPSSVASRMRRN 315
Query: 619 --DMQYSGNTFANPVLPS 634
D Q G PS
Sbjct: 316 QEDQQSQGRRMPPQYTPS 333
Score = 39 (18.8 bits), Expect = 1.5e-26, Sum P(4) = 1.5e-26
Identities = 15/68 (22%), Positives = 26/68 (38%)
Query: 514 GIGAT-RNLNGMVNQVALDFHSPPMDPRYAQYLQRTSDYATRSAASASDPFAARNHFGSS 572
G+ ++ +N+ +V+ L + YA Q ++D + A A S
Sbjct: 459 GVSSSGQNIPSLVDPFQLQYFQQAQVDAYAPPFQSSTDSFGQKDQQAVGYMANHEPLNSP 518
Query: 573 LGDSDGLQ 580
L GLQ
Sbjct: 519 LSPGYGLQ 526
>TAIR|locus:2117552 [details] [associations]
symbol:PUM6 "pumilio 6" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003729
"mRNA binding" evidence=IDA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003729 EMBL:AL049480 eggNOG:COG5099 HSSP:Q14671
HOGENOM:HOG000238460 EMBL:AF360298 EMBL:AY133866 EMBL:AK318840
EMBL:AK319148 IPI:IPI00518278 IPI:IPI00520481 IPI:IPI00656838
IPI:IPI00972816 PIR:T04242 RefSeq:NP_001031720.1 RefSeq:NP_567733.1
RefSeq:NP_974618.2 UniGene:At.21892 UniGene:At.28428
ProteinModelPortal:Q9C5E7 SMR:Q9C5E7 STRING:Q9C5E7 PaxDb:Q9C5E7
PRIDE:Q9C5E7 EnsemblPlants:AT4G25880.1 GeneID:828694
KEGG:ath:AT4G25880 TAIR:At4g25880 InParanoid:Q9C5E7 OMA:MEGSFLA
PhylomeDB:Q9C5E7 ProtClustDB:CLSN2689613 Genevestigator:Q9C5E7
Uniprot:Q9C5E7
Length = 861
Score = 1054 (376.1 bits), Expect = 7.3e-117, Sum P(3) = 7.3e-117
Identities = 202/337 (59%), Positives = 252/337 (74%)
Query: 677 SLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHAR 736
+ L+E K+ K R F+LSDI H+VEFS DQ+GSRFIQQKLE EEK +F EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 737 TLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQ 796
LMTDVFGNYVIQKFFE+G +QR +LA QL G ++ LSLQMYGCRVIQKAL+V+ DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 797 TQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVI 856
++ ELDG VM+CV DQNGNHVIQKCIE IP D++ F++ +F GQV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 857 QRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQI 916
QR+LE C + + I +EI++ VC L++DQYGNYV QHVLE G ER + +L+G I
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 917 VRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLE 976
V++S KFASNV+EKCL +G ER L+I E+ G + L MMKD +GNYVVQK+ E
Sbjct: 755 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 814
Query: 977 TCD-DQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
TC DQ L L SR+R+H + LKKYTYGKHIVSR+E+
Sbjct: 815 TCTADQRLTLF-SRVRMHASALKKYTYGKHIVSRLEQ 850
Score = 246 (91.7 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 75/299 (25%), Positives = 139/299 (46%)
Query: 694 DIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFE 753
+I+ H + TD +G+ IQ+ E + ++ + +++ L ++G VIQK +
Sbjct: 568 EILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALD 627
Query: 754 HGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHD 813
QR +LA +L G V+R G VIQK +E + D+ M+ G V
Sbjct: 628 VIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMH 687
Query: 814 QNGNHVIQKCIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQII 872
G VIQ+ +E C + +FI V LS YG V Q VLE + ++ I
Sbjct: 688 PYGCRVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEK-GTSEERERI 746
Query: 873 MDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAG------QIVRMSQQKFAS 926
++ H+ L+ ++ + VI+ LE+G ER +I ++AG ++ M + ++ +
Sbjct: 747 GRKLSGHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGN 806
Query: 927 NVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLEL 985
VV+K + ++R L + + A+ K +G ++V ++ + +++ EL
Sbjct: 807 YVVQKIFETCTADQRLTLFSRV------RMHASALKKYTYGKHIVSRLEQPSIEENQEL 859
Score = 208 (78.3 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 57/226 (25%), Positives = 113/226 (50%)
Query: 800 VAELDGSVMKCVHDQNGNHVIQKCIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQR 858
++++ G +++ DQ+G+ IQ+ +E C P+++ + L T +G VIQ+
Sbjct: 530 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAA-VFREILPHACKLMTDVFGNYVIQK 588
Query: 859 VLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVR 918
E+ + +++ D++M + L+ YG VIQ L+ +P +R + +L GQ++R
Sbjct: 589 FFEYGNSTQRKELA-DQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMR 647
Query: 919 MSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETC 978
+ + ++V++KC+ P ++ + ML + + ++ P+G V+Q++LE C
Sbjct: 648 CVRDQNGNHVIQKCIE-NIPADK---VGFMLYAF--RGQVSSLSMHPYGCRVIQRLLERC 701
Query: 979 D-DQSLELILSRIRVHLNVLKKYTYGKHIVSRI-EKLIATGERRIG 1022
D I I + VL K YG ++ + EK + RIG
Sbjct: 702 SHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIG 747
Score = 205 (77.2 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 74/306 (24%), Positives = 140/306 (45%)
Query: 730 EIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALE 789
+I H D G+ IQ+ E+ ++A + ++ H +L ++G VIQK E
Sbjct: 532 DITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFE 591
Query: 790 VVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECI-PQDRIQFIISSFYGQVVALST 848
+ Q+ ++ +L G ++ G VIQK ++ I P R++ + GQV+
Sbjct: 592 YGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVR-LARELDGQVMRCVR 650
Query: 849 HPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH-GKPHERTT 907
G VIQ+ +E+ A+ ++ V +L+ YG VIQ +LE H+
Sbjct: 651 DQNGNHVIQKCIENIP-ADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 709
Query: 908 VITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFG 967
+ ++ + +S+ ++ + V + L G+ EER+ + ++ G +Q + F
Sbjct: 710 ITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI-----VQLSLHK-FA 763
Query: 968 NYVVQKVLETCDDQSLELILSRIRV------HLNVLKKYTYGKHIVSRIEKLIATGERRI 1021
+ V++K LE +LI+ I L ++ K YG ++V +I + T ++R+
Sbjct: 764 SNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFET-CTADQRL 822
Query: 1022 GLSSSV 1027
L S V
Sbjct: 823 TLFSRV 828
Score = 139 (54.0 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 40/156 (25%), Positives = 68/156 (43%)
Query: 673 RLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEII 732
R+ LL+ + F +I++ V S DQYG+ Q LE T+EE+ RI ++
Sbjct: 692 RVIQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLS 751
Query: 733 PHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTG------HVLRLSLQMYGCRVIQK 786
H L F + VI+K E+G +R + ++ G +L + YG V+QK
Sbjct: 752 GHIVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQK 811
Query: 787 ALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQK 822
E DQ+ + + + G H++ +
Sbjct: 812 IFETCTADQRLTLFSRVRMHASALKKYTYGKHIVSR 847
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 897 LEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENE 956
L+ GK R ++ + G IV S + S +++ L PEE+ + E+L +
Sbjct: 520 LKSGKG--RRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACK-- 575
Query: 957 PLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIAT 1016
+M D FGNYV+QK E + + + ++ + L YG ++ + +I
Sbjct: 576 ----LMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEP 631
Query: 1017 GER 1019
+R
Sbjct: 632 DQR 634
Score = 75 (31.5 bits), Expect = 7.3e-117, Sum P(3) = 7.3e-117
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 48 NRERDVNI-YRSGSAPPTVEGSLNAVGSLFLRDNPGSICN 86
+ R V++ RSGSAPP +EGS AV +L R GS+ N
Sbjct: 17 SNSRKVSVPNRSGSAPPNMEGSFLAVDNLLSRQG-GSVYN 55
Score = 57 (25.1 bits), Expect = 7.3e-117, Sum P(3) = 7.3e-117
Identities = 36/142 (25%), Positives = 57/142 (40%)
Query: 384 LQLNPDNQS--DFLYD-TSNG----HNQSMKQQFMDKSTADNLA-FSTHYIDFTRKNGIV 435
++L+P +QS DF D TS+G H++S + +TAD FS D K+
Sbjct: 151 IRLSPGSQSLADFRQDDTSSGQTPQHSRSNSSNG-EVNTADESGNFSELSDDVVVKDNAA 209
Query: 436 PNLNASAINSNGQ-----VNILKRT--SSPNLYSKMNSTGFGGSSRSVGRQQNANISSLD 488
AS N ++ +K T S P +G R +QQN N + +
Sbjct: 210 STARASIGNEKSPDESTIISKMKSTNISGPGTAKYPREPRYGQPERQPHQQQN-NATWIQ 268
Query: 489 FTNVSGDYSVNQKLNSLVNHHF 510
+ G + VN + H+
Sbjct: 269 GGSNMGSHGVNDAVIGAGQFHY 290
Score = 38 (18.4 bits), Expect = 7.3e-115, Sum P(3) = 7.3e-115
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 358 DIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQS 392
D LSG S ++ H E+ + + +L + P S
Sbjct: 371 DFIPQLSGPSAGSVVHGGEMQYAE-KLYVPPGQPS 404
>UNIPROTKB|E1BWC0 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0034063 "stress
granule assembly" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 OMA:LFDYSSQ EMBL:AADN02018552
EMBL:AADN02018553 EMBL:AADN02018554 EMBL:AADN02018555
IPI:IPI00682927 Ensembl:ENSGALT00000026591 Uniprot:E1BWC0
Length = 1062
Score = 1034 (369.0 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 193/348 (55%), Positives = 256/348 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 706 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 765
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 766 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQ 825
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGCRV
Sbjct: 826 QNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 885
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++ G+
Sbjct: 886 IQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 944
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQK+
Sbjct: 945 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1004
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIG 1022
++ + ++I+ +IR H+ L+KYTYGKHI++++EK +G
Sbjct: 1005 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSADLG 1052
Score = 49 (22.3 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 568 FGSSVGSSASSSATRRDSLSTSSDLYKRSSSSLAPIG 604
Score = 46 (21.3 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 33/150 (22%), Positives = 61/150 (40%)
Query: 395 LYDTSNGHNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQ----VN 450
L +NG + + Q + N + ++ F N + N S++ S+G
Sbjct: 490 LTGATNGLFRPLGAQPQQQQQQTNSSLQSN--SFYGSNSLTNNSPNSSLFSHGPGQPGST 547
Query: 451 ILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNANISSLDFTNVSGD-YS-VNQKLNSLVNH 508
L SS +L + + S GG SVG +++ + D + S D Y + L +
Sbjct: 548 SLGFGSSSSLGAAIGSA-LGGFGSSVGSSASSSATRRDSLSTSSDLYKRSSSSLAPIGQP 606
Query: 509 HFDTVGIGATRNLNGMVNQVALDFHS--PP 536
++++G ++ + GM HS PP
Sbjct: 607 FYNSLGFSSSPSPIGMPLPSQTPGHSLTPP 636
Score = 39 (18.8 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 296 NRIPSHS-FASAVGSSLSRSTT-PEAQLVGRSSGSGLPPVGSRVGAVEKNGA 345
N P+ S F+ G S S + +G + GS L GS VG+ + A
Sbjct: 529 NNSPNSSLFSHGPGQPGSTSLGFGSSSSLGAAIGSALGGFGSSVGSSASSSA 580
Score = 37 (18.1 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 141 QRFQGGGSSLGDIADWRKKGV-NGGDRSSLFSMQPG 175
Q+ Q SSL + + + N SSLFS PG
Sbjct: 507 QQQQQTNSSLQSNSFYGSNSLTNNSPNSSLFSHGPG 542
>UNIPROTKB|F1NV23 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GeneTree:ENSGT00390000017241 EMBL:AADN02018552
EMBL:AADN02018553 EMBL:AADN02018554 EMBL:AADN02018555
IPI:IPI00735100 Ensembl:ENSGALT00000026590 Uniprot:F1NV23
Length = 1061
Score = 1034 (369.0 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 193/348 (55%), Positives = 256/348 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 705 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 764
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 765 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQ 824
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGCRV
Sbjct: 825 QNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 884
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++ G+
Sbjct: 885 IQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 943
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQK+
Sbjct: 944 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1003
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIG 1022
++ + ++I+ +IR H+ L+KYTYGKHI++++EK +G
Sbjct: 1004 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSADLG 1051
Score = 49 (22.3 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 567 FGSSVGSSASSSATRRDSLSTSSDLYKRSSSSLAPIG 603
Score = 46 (21.3 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 33/150 (22%), Positives = 61/150 (40%)
Query: 395 LYDTSNGHNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQ----VN 450
L +NG + + Q + N + ++ F N + N S++ S+G
Sbjct: 489 LTGATNGLFRPLGAQPQQQQQQTNSSLQSN--SFYGSNSLTNNSPNSSLFSHGPGQPGST 546
Query: 451 ILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNANISSLDFTNVSGD-YS-VNQKLNSLVNH 508
L SS +L + + S GG SVG +++ + D + S D Y + L +
Sbjct: 547 SLGFGSSSSLGAAIGSA-LGGFGSSVGSSASSSATRRDSLSTSSDLYKRSSSSLAPIGQP 605
Query: 509 HFDTVGIGATRNLNGMVNQVALDFHS--PP 536
++++G ++ + GM HS PP
Sbjct: 606 FYNSLGFSSSPSPIGMPLPSQTPGHSLTPP 635
Score = 39 (18.8 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 296 NRIPSHS-FASAVGSSLSRSTT-PEAQLVGRSSGSGLPPVGSRVGAVEKNGA 345
N P+ S F+ G S S + +G + GS L GS VG+ + A
Sbjct: 528 NNSPNSSLFSHGPGQPGSTSLGFGSSSSLGAAIGSALGGFGSSVGSSASSSA 579
Score = 37 (18.1 bits), Expect = 6.4e-110, Sum P(3) = 6.4e-110
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 141 QRFQGGGSSLGDIADWRKKGV-NGGDRSSLFSMQPG 175
Q+ Q SSL + + + N SSLFS PG
Sbjct: 506 QQQQQTNSSLQSNSFYGSNSLTNNSPNSSLFSHGPG 541
>UNIPROTKB|F1N2B8 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 OMA:LFDYSSQ EMBL:DAAA02031737
IPI:IPI00703675 Ensembl:ENSBTAT00000014813 Uniprot:F1N2B8
Length = 1069
Score = 1035 (369.4 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 192/338 (56%), Positives = 256/338 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 713 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 772
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 773 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 832
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGCRV
Sbjct: 833 QSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 892
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++ G+
Sbjct: 893 IQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 951
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQK+
Sbjct: 952 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1011
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++I+ +IR H++ L+KYTYGKHI++++EK
Sbjct: 1012 IDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEK 1049
Score = 279 (103.3 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 70/255 (27%), Positives = 128/255 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 732 LIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEF 791
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQD 886
D+ + + G V+ L+ YGCRVIQ+ LE ++ Q ++ E+ HV +D
Sbjct: 792 GSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESIS-SDQQSEMVKELDGHVLKCVKD 850
Query: 887 QYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLIN 946
Q GN+V+Q +E +P +I GQ+ +S + V+++ L + E+ ++
Sbjct: 851 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 910
Query: 947 EMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHI 1006
E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ + ++
Sbjct: 911 ELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 964
Query: 1007 VSRIEKLIATGERRI 1021
V + + ER +
Sbjct: 965 VEKCVTHASRAERAL 979
Score = 50 (22.7 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 575 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 611
Score = 41 (19.5 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL ++ +G + GS L GS VG+
Sbjct: 526 NSFYGSTSLTNSSQSSSLFSHGPGQPGSTSLGFGSSSS---LGAAIGSALSGFGSSVGSS 582
Query: 341 EKNGA 345
+ A
Sbjct: 583 ASSSA 587
>UNIPROTKB|F1SCU6 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 OMA:LFDYSSQ EMBL:AEMK01186664
EMBL:CU466989 Ensembl:ENSSSCT00000009411 Uniprot:F1SCU6
Length = 1064
Score = 1034 (369.0 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 192/338 (56%), Positives = 255/338 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 767
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGCRV
Sbjct: 828 QSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 887
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++ G+
Sbjct: 888 IQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 946
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQK+
Sbjct: 947 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1006
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1007 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1044
Score = 279 (103.3 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 70/255 (27%), Positives = 128/255 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 727 LIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEF 786
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQD 886
D+ + + G V+ L+ YGCRVIQ+ LE ++ Q ++ E+ HV +D
Sbjct: 787 GSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESIS-SDQQSEMVKELDGHVLKCVKD 845
Query: 887 QYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLIN 946
Q GN+V+Q +E +P +I GQ+ +S + V+++ L + E+ ++
Sbjct: 846 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 905
Query: 947 EMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHI 1006
E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ + ++
Sbjct: 906 ELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 959
Query: 1007 VSRIEKLIATGERRI 1021
V + + ER +
Sbjct: 960 VEKCVTHASRAERAL 974
Score = 50 (22.7 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 570 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 606
Score = 41 (19.5 bits), Expect = 1.2e-106, Sum P(2) = 1.2e-106
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL ++ +G + GS L GS VG+
Sbjct: 521 NSFYGSTSLTNSSQSSSLFSHGPGQPGSTSLGFGSSSS---LGAAIGSALSGFGSSVGSS 577
Query: 341 EKNGA 345
+ A
Sbjct: 578 ASSSA 582
>UNIPROTKB|E2RT57 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 CTD:23369 OMA:LFDYSSQ
EMBL:AAEX03010760 RefSeq:XP_849088.1 Ensembl:ENSCAFT00000006180
GeneID:607618 KEGG:cfa:607618 Uniprot:E2RT57
Length = 1063
Score = 1034 (369.0 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 192/338 (56%), Positives = 255/338 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 707 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 766
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 767 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 826
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGCRV
Sbjct: 827 QSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 886
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++ G+
Sbjct: 887 IQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 945
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQK+
Sbjct: 946 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 1005
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1006 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1043
Score = 279 (103.3 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 70/255 (27%), Positives = 128/255 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 726 LIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEF 785
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQD 886
D+ + + G V+ L+ YGCRVIQ+ LE ++ Q ++ E+ HV +D
Sbjct: 786 GSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESIS-SDQQSEMVKELDGHVLKCVKD 844
Query: 887 QYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLIN 946
Q GN+V+Q +E +P +I GQ+ +S + V+++ L + E+ ++
Sbjct: 845 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 904
Query: 947 EMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHI 1006
E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ + ++
Sbjct: 905 ELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 958
Query: 1007 VSRIEKLIATGERRI 1021
V + + ER +
Sbjct: 959 VEKCVTHASRAERAL 973
Score = 50 (22.7 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 569 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 605
Score = 40 (19.1 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL ++ +G + GS L GS VG+
Sbjct: 520 NSFYGSTSLTSSSQSSSLFSHGPGQPGSTSLGFGSSSS---LGAAIGSALSGFGSSVGSS 576
Query: 341 EKNGA 345
+ A
Sbjct: 577 ASSSA 581
>UNIPROTKB|B4E2B6 [details] [associations]
symbol:PUM2 "Pumilio homolog 2" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 GO:GO:0010494
GO:GO:0034063 HOVERGEN:HBG049462 OrthoDB:EOG4P8FHP EMBL:AC007041
UniGene:Hs.467824 HGNC:HGNC:14958 ChiTaRS:PUM2 EMBL:AK304198
IPI:IPI01009448 SMR:B4E2B6 STRING:B4E2B6 Ensembl:ENST00000536417
UCSC:uc010yjz.1 Uniprot:B4E2B6
Length = 1008
Score = 1034 (369.0 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 192/338 (56%), Positives = 255/338 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 652 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 711
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 712 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 771
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGCRV
Sbjct: 772 QSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRV 831
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++ G+
Sbjct: 832 IQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGK 890
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQK+
Sbjct: 891 VLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKM 950
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 951 IDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 988
Score = 279 (103.3 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 70/255 (27%), Positives = 128/255 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 671 LIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEF 730
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQD 886
D+ + + G V+ L+ YGCRVIQ+ LE ++ Q ++ E+ HV +D
Sbjct: 731 GSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESIS-SDQQSEMVKELDGHVLKCVKD 789
Query: 887 QYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLIN 946
Q GN+V+Q +E +P +I GQ+ +S + V+++ L + E+ ++
Sbjct: 790 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILE 849
Query: 947 EMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHI 1006
E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ + ++
Sbjct: 850 ELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV 903
Query: 1007 VSRIEKLIATGERRI 1021
V + + ER +
Sbjct: 904 VEKCVTHASRAERAL 918
Score = 50 (22.7 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 514 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 550
Score = 39 (18.8 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL + +G + GS L GS VG+
Sbjct: 465 NSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGS---GNSLGAAIGSALSGFGSSVGSS 521
Query: 341 EKNGA 345
+ A
Sbjct: 522 ASSSA 526
>FB|FBgn0003165 [details] [associations]
symbol:pum "pumilio" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=NAS;IDA] [GO:0048477 "oogenesis"
evidence=TAS] [GO:0007280 "pole cell migration" evidence=IMP;TAS]
[GO:0042078 "germ-line stem cell division" evidence=NAS;TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0017148
"negative regulation of translation" evidence=TAS] [GO:0007281
"germ cell development" evidence=TAS] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0045727 "positive regulation of
translation" evidence=TAS] [GO:0008258 "head involution"
evidence=IMP] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0045786
"negative regulation of cell cycle" evidence=TAS] [GO:0016477 "cell
migration" evidence=TAS] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0007616 "long-term memory"
evidence=IMP;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0050804
"regulation of synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IDA] [GO:0048149 "behavioral response to ethanol"
evidence=IMP] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=IMP] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 EMBL:AE014297 GO:GO:0005737 GO:GO:0045892
GO:GO:0007280 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007067 GO:GO:0008595 GO:GO:0007616 GO:GO:0048477
GO:GO:0048813 GO:GO:0003730 GO:GO:0045727 GO:GO:0042059
GO:GO:0001709 GO:GO:0045786 GO:GO:0008582 GO:GO:0000288
GO:GO:0000900 GO:GO:0008258 GO:GO:0042078 GO:GO:0050804
eggNOG:COG5099 GeneTree:ENSGT00390000017241 EMBL:X62589 EMBL:L07943
EMBL:BT001872 EMBL:BT009970 EMBL:BT021317 PIR:A46221
RefSeq:NP_524285.2 RefSeq:NP_731314.1 RefSeq:NP_731315.1
RefSeq:NP_731316.2 RefSeq:NP_788604.1 UniGene:Dm.1115 PDB:3H3D
PDBsum:3H3D ProteinModelPortal:P25822 SMR:P25822 MINT:MINT-822094
STRING:P25822 PaxDb:P25822 EnsemblMetazoa:FBtr0081990
EnsemblMetazoa:FBtr0081991 EnsemblMetazoa:FBtr0081992
EnsemblMetazoa:FBtr0333667 GeneID:41094 KEGG:dme:Dmel_CG9755
UCSC:CG9755-RA CTD:41094 FlyBase:FBgn0003165 InParanoid:P25822
OMA:LASPTIC OrthoDB:EOG4HMGRT PhylomeDB:P25822
EvolutionaryTrace:P25822 GenomeRNAi:41094 NextBio:822132
Bgee:P25822 GermOnline:CG9755 Uniprot:P25822
Length = 1533
Score = 1005 (358.8 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 194/346 (56%), Positives = 255/346 (73%)
Query: 667 GINMEGRLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTR 726
G GR S LL++F+ + + +L D+ +H+VEFS DQ+GSRFIQQKLE ATA EK
Sbjct: 1086 GAPQPGR--SRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQM 1143
Query: 727 IFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQK 786
+F EI+ A +LMTDVFGNYVIQKFFE GT Q+ L Q+ GHVL+L+LQMYGCRVIQK
Sbjct: 1144 VFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQK 1203
Query: 787 ALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVAL 846
ALE + +QQ ++V ELDG V+KCV DQNGNHV+QKCIEC+ +QFII++F GQV +L
Sbjct: 1204 ALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSL 1263
Query: 847 STHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERT 906
STHPYGCRVIQR+LEHC T I+ DE+ +H L QDQYGNYVIQHVLEHGK +++
Sbjct: 1264 STHPYGCRVIQRILEHCTAEQTTPIL-DELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKS 1322
Query: 907 TVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPF 966
+I + G+++ +SQ KFASNVVEKC+T + ER LI+E+ T + L MMKD +
Sbjct: 1323 ILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVC--TFNDNALHVMMKDQY 1380
Query: 967 GNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
NYVVQK+++ + L+ ++++IR H+ L+KYTYGKHI +++EK
Sbjct: 1381 ANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEK 1426
Score = 290 (107.1 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 71/261 (27%), Positives = 129/261 (49%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L H++ S +G R IQ+ LE ++ + +E+ + + D GN+VIQK E
Sbjct: 1112 LANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEF 1171
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQD 886
++ + G V+ L+ YGCRVIQ+ LE Q+I+ E+ HV +D
Sbjct: 1172 GTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIV-HELDGHVLKCVKD 1230
Query: 887 QYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLIN 946
Q GN+V+Q +E P +I GQ+ +S + V+++ L + E+ +++
Sbjct: 1231 QNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILD 1290
Query: 947 EMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHI 1006
E+ +E + +++D +GNYV+Q VLE + ++++ +R + VL ++ + ++
Sbjct: 1291 EL------HEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNV 1344
Query: 1007 VSRIEKLIATGERRIGLSSSV 1027
V + GER GL V
Sbjct: 1345 VEKCVTHATRGERT-GLIDEV 1364
Score = 58 (25.5 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 454 RTSSPNLYSKMNSTGFGG----SSRSVGRQQNANISSLDFTNVSGDYS 497
+T+ NLYS+ N + GG +S GR+ + + S+ F+ + DY+
Sbjct: 871 QTAQQNLYSQQNGSSVGGLALNTSSLTGRRDSFDRSTSAFSPSTMDYT 918
Score = 47 (21.6 bits), Expect = 8.1e-103, Sum P(2) = 8.1e-103
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 570 GSSLGDSDGLQKAHLELLLAQQNQQHEMQLLGK 602
G+ LG+ +GL H QQ QQ + Q G+
Sbjct: 246 GNGLGNGNGLGIQHPGQQQQQQQQQQQQQHPGQ 278
Score = 46 (21.3 bits), Expect = 1.0e-102, Sum P(2) = 1.0e-102
Identities = 35/160 (21%), Positives = 54/160 (33%)
Query: 453 KRTSSPNLYSKMNSTGFGGSSRSVGRQQNANISSLDFTNVSGDYSVNQKLNSLVNHHFDT 512
K +S L + + F + +S ++ AN S D + D V N +VN D
Sbjct: 474 KDSSLSGLEPHLRNLKFDDNDKSRDDKEKAN-SPFDTNGLKKDDQVTNS-NGVVNGIDDD 531
Query: 513 VGIGATRNLNGMVNQVALDFHSPPMDPRYA----QYLQRTSDYATRSAASASDPFAARNH 568
G T Q + S P P + D+ + N
Sbjct: 532 KGFNRTPGSR----QPSPAEESQPRPPNLLFPPLPFNHMLMDHGQGMGGGLGGVVGSGNG 587
Query: 569 FG--SSLGDSDGLQKAHLELLLAQQNQQHEMQLLGKSGGL 606
G S G + G AH ++ AQ +Q + G GG+
Sbjct: 588 VGGGSGGGGAGGAYAAHQQMA-AQMSQLQPPMMNGVGGGM 626
Score = 45 (20.9 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 552 ATRSAASASDPFAARNHFGSS 572
AT +AA A+ AA N FGS+
Sbjct: 1016 ATAAAAQAAVAAAANNMFGSN 1036
Score = 45 (20.9 bits), Expect = 1.3e-102, Sum P(2) = 1.3e-102
Identities = 34/169 (20%), Positives = 60/169 (35%)
Query: 468 GFGGSSRSVGRQQNANISSLD---FTNVSGDYSVNQKLNSLVNHHFDTVGIGATRNLNGM 524
G G + + +Q A +S L V G + + + ++NH G + +
Sbjct: 595 GGAGGAYAAHQQMAAQMSQLQPPMMNGVGGGMPMAAQ-SPMLNHQ--AAGPNHMESPGNL 651
Query: 525 VNQVALDFHS--PPMDPRYAQYLQRTSDYATRSAASASDPFAARNHFGSSLGDSDGLQKA 582
+ Q D +P A + A +AA+ S AA G+ + LQ++
Sbjct: 652 LQQQNFDVQQLFRSQNPGLAAVATNAAAAAAAAAAATSAASAAAA-VGAPPVPNGSLQQS 710
Query: 583 HLELLLAQQNQQHE-MQLLGKSGGLFPGYYETQPYRLDMQYSGNTFANP 630
+ QQ QQ + M + S + Q Q + + NP
Sbjct: 711 QQQQQQQQQQQQQQQMHMAAASQQFLAAQQQAQNAAYAAQQATSYVINP 759
Score = 40 (19.1 bits), Expect = 4.4e-102, Sum P(2) = 4.4e-102
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 591 QNQQHEMQLLGKSGGLFPG 609
QNQ H L+G GL G
Sbjct: 234 QNQGHPHHLMGGGNGLGNG 252
>UNIPROTKB|Q8TB72 [details] [associations]
symbol:PUM2 "Pumilio homolog 2" species:9606 "Homo sapiens"
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 EMBL:CH471053 GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 GO:GO:0010494
GO:GO:0034063 eggNOG:COG5099 HOGENOM:HOG000238461
HOVERGEN:HBG049462 EMBL:AF315591 EMBL:D87078 EMBL:AC007041
EMBL:AK093847 EMBL:BC024218 EMBL:BC112046 EMBL:BC112048
EMBL:AF272350 IPI:IPI00022184 IPI:IPI00398749 IPI:IPI00398750
RefSeq:NP_056132.1 UniGene:Hs.467824 PDB:3Q0Q PDB:3Q0R PDB:3Q0S
PDBsum:3Q0Q PDBsum:3Q0R PDBsum:3Q0S ProteinModelPortal:Q8TB72
SMR:Q8TB72 IntAct:Q8TB72 MINT:MINT-254513 STRING:Q8TB72
PhosphoSite:Q8TB72 DMDM:41688714 PaxDb:Q8TB72 PRIDE:Q8TB72
Ensembl:ENST00000319801 Ensembl:ENST00000338086
Ensembl:ENST00000361078 Ensembl:ENST00000403432
Ensembl:ENST00000440577 GeneID:23369 KEGG:hsa:23369 UCSC:uc002rds.1
CTD:23369 GeneCards:GC02M020448 HGNC:HGNC:14958 HPA:HPA030316
MIM:607205 neXtProt:NX_Q8TB72 PharmGKB:PA34043 InParanoid:Q8TB72
OMA:HITSIPR PhylomeDB:Q8TB72 ChiTaRS:PUM2 EvolutionaryTrace:Q8TB72
GenomeRNAi:23369 NextBio:45440 ArrayExpress:Q8TB72 Bgee:Q8TB72
CleanEx:HS_PUM2 Genevestigator:Q8TB72 GermOnline:ENSG00000055917
Uniprot:Q8TB72
Length = 1066
Score = 1023 (365.2 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 192/340 (56%), Positives = 255/340 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 767
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 796 Q--TQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q ++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++
Sbjct: 888 RVIQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 946
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G+++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQ
Sbjct: 947 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1006
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1007 KMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
Score = 279 (103.3 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 71/258 (27%), Positives = 130/258 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 727 LIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEF 786
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCNL 883
D+ + + G V+ L+ YGCRVIQ+ LE ++ QQ+I + + + HV
Sbjct: 787 GSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESI--SSDQQVISEMVKELDGHVLKC 844
Query: 884 AQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQL 943
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L + E+
Sbjct: 845 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP 904
Query: 944 LINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYG 1003
++ E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ +
Sbjct: 905 ILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA 958
Query: 1004 KHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 959 SNVVEKCVTHASRAERAL 976
Score = 50 (22.7 bits), Expect = 1.9e-106, Sum P(2) = 1.9e-106
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 570 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 606
Score = 39 (18.8 bits), Expect = 2.8e-105, Sum P(2) = 2.8e-105
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL + +G + GS L GS VG+
Sbjct: 521 NSFYGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGS---GNSLGAAIGSALSGFGSSVGSS 577
Query: 341 EKNGA 345
+ A
Sbjct: 578 ASSSA 582
>RGD|1311024 [details] [associations]
symbol:Pum2 "pumilio homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0010494 "cytoplasmic
stress granule" evidence=ISO] [GO:0034063 "stress granule assembly"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 RGD:1311024
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
IPI:IPI00950922 Ensembl:ENSRNOT00000064843 ArrayExpress:D4A0R8
Uniprot:D4A0R8
Length = 904
Score = 1022 (364.8 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 192/340 (56%), Positives = 255/340 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 546 SRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAA 605
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 606 YQLMTDVFGNYVIQKFFEFGSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESISSDQ 665
Query: 796 Q--TQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q ++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGC
Sbjct: 666 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 725
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++
Sbjct: 726 RVIQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 784
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G+++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQ
Sbjct: 785 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 844
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 845 KMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 884
Score = 280 (103.6 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 71/258 (27%), Positives = 130/258 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 565 LMGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQKFFEF 624
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCNL 883
D+ + + G V+ L+ YGCRVIQ+ LE ++ QQ+I + + + HV
Sbjct: 625 GSLDQKLALANRIRGHVLPLALQMYGCRVIQKALESI--SSDQQVISEMVKELDGHVLKC 682
Query: 884 AQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQL 943
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L + E+
Sbjct: 683 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP 742
Query: 944 LINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYG 1003
++ E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ +
Sbjct: 743 ILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA 796
Query: 1004 KHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 797 SNVVEKCVTHASRAERAL 814
Score = 50 (22.7 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 408 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 444
Score = 41 (19.5 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 35/187 (18%), Positives = 74/187 (39%)
Query: 191 AARRNLSRDASAEWLERGSDRLIGVPAAGLGSRRKSFADILQEGLDRPASLSGHLSRPAS 250
AA N + +A + G +++ P AG +R Q+G + + + P
Sbjct: 200 AAASNTANQQAASQAQPGQQQVLR-PGAG---QRPITPSQGQQGQQAESLAAAAAANPTL 255
Query: 251 CNAYGEIVGTGIADAH-RAGSCNGAESLEVLHSAAASPGL---VRTKSHNRIPSHSFASA 306
A+G+ + G+ A + ++ ++ A GL VR + + S A+
Sbjct: 256 --AFGQSLAAGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQ 313
Query: 307 VGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVGSNVQNDIELADIAATLSGL 366
++ + + L G ++G P+G++ ++ +N+Q++ + T S
Sbjct: 314 AAAAAAAAGGTANSLTGSTNGL-FRPIGTQPPQQQQQQQPSTNLQSNSFYGSSSLTNSSQ 372
Query: 367 SLSNIRH 373
S S H
Sbjct: 373 SSSLFSH 379
Score = 39 (18.8 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL + +G + GS L GS VG+
Sbjct: 359 NSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGS---GSSLGAAIGSALSGFGSSVGSS 415
Query: 341 EKNGA 345
+ A
Sbjct: 416 ASSSA 420
>MGI|MGI:1931751 [details] [associations]
symbol:Pum2 "pumilio 2 (Drosophila)" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0030425
"dendrite" evidence=ISO] [GO:0034063 "stress granule assembly"
evidence=ISO;IDA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 MGI:MGI:1931751 GO:GO:0048471
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0043025 GO:GO:0030425 GO:GO:0003723 GO:GO:0010494
GO:GO:0034063 eggNOG:COG5099 GeneTree:ENSGT00390000017241
HOGENOM:HOG000238461 HOVERGEN:HBG049462 OrthoDB:EOG4P8FHP CTD:23369
ChiTaRS:PUM2 EMBL:AY027917 EMBL:AF315590 EMBL:AK122225
EMBL:BC013765 EMBL:BC041773 IPI:IPI00112203 IPI:IPI00400191
IPI:IPI00400192 RefSeq:NP_001153691.1 RefSeq:NP_001153694.1
RefSeq:NP_109648.2 UniGene:Mm.341243 PDB:3GVO PDB:3GVT PDBsum:3GVO
PDBsum:3GVT ProteinModelPortal:Q80U58 SMR:Q80U58 IntAct:Q80U58
STRING:Q80U58 PhosphoSite:Q80U58 PaxDb:Q80U58 PRIDE:Q80U58
Ensembl:ENSMUST00000163569 Ensembl:ENSMUST00000168361
Ensembl:ENSMUST00000169089 Ensembl:ENSMUST00000178015 GeneID:80913
KEGG:mmu:80913 UCSC:uc007mzw.2 UCSC:uc007mzy.2 UCSC:uc007naa.2
InParanoid:Q80U58 OMA:LFDYSSQ EvolutionaryTrace:Q80U58
NextBio:350290 Bgee:Q80U58 CleanEx:MM_PUM2 Genevestigator:Q80U58
GermOnline:ENSMUSG00000020594 Uniprot:Q80U58
Length = 1066
Score = 1021 (364.5 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
Identities = 192/340 (56%), Positives = 255/340 (75%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D++ H+VEFS DQ+GSRFIQQKLE AT E+ +F EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAA 767
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 796 Q--TQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q ++MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ +++++
Sbjct: 888 RVIQRILEHCTAEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIR 946
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G+++ +SQ KFASNVVEKC+T S ER LLI+E+ D + L MMKD + NYVVQ
Sbjct: 947 GKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1006
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1007 KMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
Score = 276 (102.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 71/258 (27%), Positives = 130/258 (50%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIEC 826
L GH++ S +G R IQ+ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 727 LIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEF 786
Query: 827 IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCNL 883
D+ + + G V+ L+ YGCRVIQ+ LE ++ QQ+I + + + HV
Sbjct: 787 GSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESI--SSDQQVISEMVKELDGHVLKC 844
Query: 884 AQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQL 943
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L + E+
Sbjct: 845 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP 904
Query: 944 LINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYG 1003
++ E+ T++ +++D +GNYV+Q VLE + I+S IR + L ++ +
Sbjct: 905 ILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA 958
Query: 1004 KHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 959 SNVVEKCVTHASRAERAL 976
Score = 50 (22.7 bits), Expect = 3.1e-106, Sum P(2) = 3.1e-106
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 303 FASAVGSSLSRSTTPEAQLVGRS-----SGSGLPPVG 334
F S+VGSS S S T L S S S L P+G
Sbjct: 570 FGSSVGSSASSSATRRESLSTSSDLYKRSSSSLAPIG 606
Score = 39 (18.8 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAV 340
+S S L + + + SH +SL + +G + GS L GS VG+
Sbjct: 521 NSFYGSSSLTNSSQSSSLFSHGPGQPGSASLGFGS---GSSLGAAIGSALSGFGSSVGSS 577
Query: 341 EKNGA 345
+ A
Sbjct: 578 ASSSA 582
>DICTYBASE|DDB_G0279735 [details] [associations]
symbol:pufA "RNA binding protein" species:44689
"Dictyostelium discoideum" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 dictyBase:DDB_G0279735
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CM000152_GR GO:GO:0003723 EMBL:AAFI02000032
OMA:FNDSANG RefSeq:XP_641551.1 EnsemblProtists:DDB0233053
GeneID:8622225 KEGG:ddi:DDB_G0279735 InParanoid:Q54WA7
ProtClustDB:CLSZ2846814 Uniprot:Q54WA7
Length = 785
Score = 987 (352.5 bits), Expect = 5.6e-105, Sum P(3) = 5.6e-105
Identities = 190/345 (55%), Positives = 252/345 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ K + ELSDI H+ EFS DQ GSR IQQK+E A+ EEK +F E++
Sbjct: 442 SQLLEDFRNLKMK-LELSDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAV 500
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
+LMTDVFGNYV+QKFFEHGT Q+ LA +L+GH+L L+LQMYGCRVIQKA+E + +D+
Sbjct: 501 HSLMTDVFGNYVLQKFFEHGTTEQKRILADKLSGHILSLTLQMYGCRVIQKAIESIELDK 560
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q ++ EL+G +++CV DQNGNHVIQKCIE IP IQFII SF+G + L+THPYGCRV
Sbjct: 561 QILLIGELNGHIVQCVTDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRV 620
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC + I+ DE+M+ +L QDQYGNYVIQHVLE+G P +++ ++ +L GQ
Sbjct: 621 IQRILEHCAEKQVAPIL-DELMRCAVSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQ 679
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEP-----LQAMMKDPFGNYV 970
I +SQ KFASNV+EKC+ G ER L+INE+LG D N P L ++KDP+ NYV
Sbjct: 680 IYNLSQHKFASNVIEKCVQHGCTAERILIINEILG--DANSPNSSNVLLKILKDPYANYV 737
Query: 971 VQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIA 1015
+QK+L+ + ++I++RI+ + LKK T GKHI+SRIEK A
Sbjct: 738 IQKILDIVEPAQRDMIINRIQPFVPTLKKVTPGKHIISRIEKYSA 782
Score = 264 (98.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 60/255 (23%), Positives = 130/255 (50%)
Query: 765 SQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCI 824
S + GH+ S G R+IQ+ +E ++++ + E+ +V + D GN+V+QK
Sbjct: 458 SDIKGHIAEFSKDQVGSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFF 517
Query: 825 ECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLA 884
E ++ + + G +++L+ YGCRVIQ+ +E + + Q +++ E+ H+
Sbjct: 518 EHGTTEQKRILADKLSGHILSLTLQMYGCRVIQKAIESIE-LDKQILLIGELNGHIVQCV 576
Query: 885 QDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLL 944
DQ GN+VIQ +E H +I G I +++ + V+++ L + ++ +
Sbjct: 577 TDQNGNHVIQKCIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQVAPI 636
Query: 945 INEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGK 1004
++E++ ++++D +GNYV+Q VLE + I+ +++ + L ++ +
Sbjct: 637 LDELMRCA------VSLVQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFAS 690
Query: 1005 HIVSRIEKLIATGER 1019
+++ + + T ER
Sbjct: 691 NVIEKCVQHGCTAER 705
Score = 179 (68.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 48/187 (25%), Positives = 89/187 (47%)
Query: 690 FELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQ 749
F + H+ + +T YG R IQ+ LE ++ I E++ A +L+ D +GNYVIQ
Sbjct: 599 FIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQVAPILDELMRCAVSLVQDQYGNYVIQ 658
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGS--- 806
E+GT ++ + +L G + LS + VI+K ++ ++ ++ E+ G
Sbjct: 659 HVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQHGCTAERILIINEILGDANS 718
Query: 807 ------VMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVL 860
++K + D N+VIQK ++ + + II+ V L G +I R+
Sbjct: 719 PNSSNVLLKILKDPYANYVIQKILDIVEPAQRDMIINRIQPFVPTLKKVTPGKHIISRIE 778
Query: 861 EHCDDAN 867
++ + N
Sbjct: 779 KYSANNN 785
Score = 57 (25.1 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 31/144 (21%), Positives = 58/144 (40%)
Query: 366 LSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKSTADNLAFSTHY 425
++LS+ + +SH S + +N S+ +++ +N + M+K + NL STH
Sbjct: 237 VTLSSSPTSSSLSHSPSTIVTLNNNNSNSNINSNITNNATGNNGGMNKPVSINLNTSTHS 296
Query: 426 IDFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNANIS 485
++ + PN + S ++ ++ N N G + V Q + S
Sbjct: 297 SPNSQSSPNTPN-SLSTPTPLSASTVVANNNNGNFNDSANGNGL----KPVEINQTLSPS 351
Query: 486 SLDFTNVSGDYSV--NQKLNSLVN 507
S N V N NS+V+
Sbjct: 352 STIVANAPAPNVVLSNNSTNSVVS 375
Score = 53 (23.7 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 24/109 (22%), Positives = 44/109 (40%)
Query: 402 HNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINS-NGQVNILKRTSSPNL 460
HNQ T+ +L+ S I N N+N++ N+ G + + S NL
Sbjct: 231 HNQHPVVTLSSSPTSSSLSHSPSTIVTLNNNNSNSNINSNITNNATGNNGGMNKPVSINL 290
Query: 461 ----YSKMNSTGFGGSSRSVGRQQNANISSLDFTNVSGDYSVNQKLNSL 505
+S NS + S+ + S++ N +G+++ + N L
Sbjct: 291 NTSTHSSPNSQSSPNTPNSLSTPTPLSASTVVANNNNGNFNDSANGNGL 339
Score = 47 (21.6 bits), Expect = 5.6e-105, Sum P(3) = 5.6e-105
Identities = 23/94 (24%), Positives = 40/94 (42%)
Query: 499 NQKLNSLVNHHFDTVGIGATRNLNGMVNQVALDFHSPPMDPRYAQYLQRT-SDYATRSAA 557
N NS +N + AT N GM V+++ ++ +Q T + +T +
Sbjct: 260 NNNSNSNINSNITN---NATGNNGGMNKPVSINLNTSTHSSPNSQSSPNTPNSLSTPTPL 316
Query: 558 SASDPFAARNH--FGSSLGDSDGLQKAHLELLLA 589
SAS A N+ F S + +GL+ + L+
Sbjct: 317 SASTVVANNNNGNFNDS-ANGNGLKPVEINQTLS 349
Score = 44 (20.5 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 16/64 (25%), Positives = 25/64 (39%)
Query: 12 NLEDGLRGQNGNLSLE-DSLQTELELILQRQPDRQIVNRERDVNIYRSGSAPPTVEGSLN 70
N D G NG +E + + I+ P +V N S S+PP S +
Sbjct: 329 NFNDSANG-NGLKPVEINQTLSPSSTIVANAPAPNVVLSNNSTNSVVSSSSPPPTTSSPS 387
Query: 71 AVGS 74
++ S
Sbjct: 388 SLSS 391
Score = 41 (19.5 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 240 SLSGHLSRPASCNAYGEIVGTGIADAHRAGSCNGAESLEVLHSAAASPGLVRTKSHNRIP 299
S +G+ +P N T +A+A S + S+++ P T S + +
Sbjct: 333 SANGNGLKPVEINQTLSPSSTIVANAPAPNVVLSNNSTNSVVSSSSPPPT--TSSPSSLS 390
Query: 300 SHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPP 332
S S +SA ++ + +TT A ++ S PP
Sbjct: 391 SSSLSSAATTTTTTTTTTTAT----ATQSTTPP 419
Score = 39 (18.8 bits), Expect = 5.6e-105, Sum P(3) = 5.6e-105
Identities = 31/149 (20%), Positives = 47/149 (31%)
Query: 343 NGAVGSNVQNDIELADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGH 402
NG G ND + + + H H Q Q Q ++ NGH
Sbjct: 56 NGYRGQINTNDFYINEQQQLQQQQQQQHHHHQQPPQHHQQQQHA----QKPYITSIHNGH 111
Query: 403 NQSMKQQFMDKSTADNLAFSTHYI------DFTRKNGIVPNLNASAINSNGQVNILKRTS 456
+ QQ S H+ +F K + N N + + VNI+ +
Sbjct: 112 QVGVSQQTHMVPQQQQQTTSLHHQHPQQIREFQPKRKPLTN-NTVSQSPPQPVNIINNHT 170
Query: 457 SPNLYSKMNSTGFGGSSRSVGRQQNANIS 485
N + N+ S QQN +S
Sbjct: 171 QYNSNNNNNNNN-NNQYYSSSPQQNIGLS 198
Score = 38 (18.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 568 HFGSSLGDSDGLQKAHLELLLAQQNQQHEMQ 598
++ SS + GL L + QQ+ H+ Q
Sbjct: 186 YYSSSPQQNIGLSPNSLSPSMIQQHHHHQQQ 216
>RGD|1307190 [details] [associations]
symbol:Pum1 "pumilio homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 RGD:1307190 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 IPI:IPI00776810
Ensembl:ENSRNOT00000056233 UCSC:RGD:1307190 ArrayExpress:D3ZHQ4
Uniprot:D3ZHQ4
Length = 944
Score = 1011 (360.9 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 189/338 (55%), Positives = 250/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE ATA E+ +F EI+ A
Sbjct: 588 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAA 647
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 648 YQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 707
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 708 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 767
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 768 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 826
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 827 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 886
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 887 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 924
Score = 280 (103.6 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 606 EIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 665
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 666 FGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 724
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 725 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 784
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 785 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 838
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 839 VVEKCVTHASRTERAV 854
Score = 37 (18.1 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 513 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 562
>UNIPROTKB|E1BE82 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GeneTree:ENSGT00390000017241 CTD:9698 OMA:RHVVGVK
EMBL:DAAA02006263 EMBL:DAAA02006264 EMBL:DAAA02006265
IPI:IPI00713931 RefSeq:NP_001180052.1 UniGene:Bt.44441
Ensembl:ENSBTAT00000025262 GeneID:535450 KEGG:bta:535450
NextBio:20876753 Uniprot:E1BE82
Length = 1186
Score = 1004 (358.5 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 188/338 (55%), Positives = 249/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 1010 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1068
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 1069 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1128
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1129 IDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1166
Score = 276 (102.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 848 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 907
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 908 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 966
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 967 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1026
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 1027 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1080
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 1081 VVEKCVTHASRTERAV 1096
Score = 41 (19.5 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 481 AAAATNSANQQTTPQAQ 497
Score = 38 (18.4 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 755 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 804
>UNIPROTKB|F1STL2 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GeneTree:ENSGT00390000017241 EMBL:CU928875
Ensembl:ENSSSCT00000003986 OMA:ANHVVEF Uniprot:F1STL2
Length = 735
Score = 1004 (358.5 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 188/338 (55%), Positives = 249/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 379 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 438
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 439 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 498
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 499 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 558
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 559 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 617
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 618 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 677
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 678 IDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 715
Score = 276 (102.2 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 397 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 456
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 457 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 515
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 516 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 575
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 576 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 629
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 630 VVEKCVTHASRTERAV 645
Score = 41 (19.5 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 30 AAAATNSANQQTTPQAQ 46
Score = 37 (18.1 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 304 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 353
>UNIPROTKB|Q14671 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0005829 GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:CH471059 GO:GO:0003723 GO:GO:0016044
GO:GO:0006892 eggNOG:COG5099 CTD:9698 HOGENOM:HOG000238461
HOVERGEN:HBG049462 OrthoDB:EOG4P8FHP EMBL:AF315592 EMBL:D43951
EMBL:AL356320 EMBL:AL445235 EMBL:AK291779 EMBL:BC013398
IPI:IPI00551014 IPI:IPI00941189 RefSeq:NP_001018494.1
RefSeq:NP_055491.1 UniGene:Hs.281707 PDB:1IB2 PDB:1M8W PDB:1M8X
PDB:1M8Y PDB:1M8Z PDB:2YJY PDB:3BSB PDB:3BSX PDB:3Q0L PDB:3Q0M
PDB:3Q0N PDB:3Q0O PDB:3Q0P PDBsum:1IB2 PDBsum:1M8W PDBsum:1M8X
PDBsum:1M8Y PDBsum:1M8Z PDBsum:2YJY PDBsum:3BSB PDBsum:3BSX
PDBsum:3Q0L PDBsum:3Q0M PDBsum:3Q0N PDBsum:3Q0O PDBsum:3Q0P
ProteinModelPortal:Q14671 SMR:Q14671 DIP:DIP-29082N IntAct:Q14671
MINT:MINT-1199500 STRING:Q14671 PhosphoSite:Q14671 DMDM:41688619
UCD-2DPAGE:Q14671 PaxDb:Q14671 PRIDE:Q14671 DNASU:9698
Ensembl:ENST00000257075 Ensembl:ENST00000440538 GeneID:9698
KEGG:hsa:9698 UCSC:uc001bsi.1 UCSC:uc001bsj.1 GeneCards:GC01M031405
HGNC:HGNC:14957 HPA:HPA027424 MIM:607204 neXtProt:NX_Q14671
PharmGKB:PA34042 PhylomeDB:Q14671 ChiTaRS:PUM1
EvolutionaryTrace:Q14671 GenomeRNAi:9698 NextBio:36439
ArrayExpress:Q14671 Bgee:Q14671 CleanEx:HS_PUM1
Genevestigator:Q14671 GermOnline:ENSG00000134644 Uniprot:Q14671
Length = 1186
Score = 1003 (358.1 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 188/338 (55%), Positives = 249/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 1010 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1068
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 1069 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1128
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1129 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1166
Score = 276 (102.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 848 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 907
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 908 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 966
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 967 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1026
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 1027 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1080
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 1081 VVEKCVTHASRTERAV 1096
Score = 41 (19.5 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 481 AAAATNSANQQTTPQAQ 497
Score = 38 (18.4 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 755 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 804
>UNIPROTKB|H0YEH2 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 Ensembl:ENST00000525843 Uniprot:H0YEH2
Length = 1125
Score = 1003 (358.1 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 188/338 (55%), Positives = 249/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 769 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 828
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 829 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 888
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 889 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 948
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 949 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1007
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 1008 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1067
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1068 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1105
Score = 276 (102.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 787 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 846
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 847 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 905
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 906 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 965
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 966 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1019
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 1020 VVEKCVTHASRTERAV 1035
Score = 41 (19.5 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 499 AAAATNSANQQTTPQAQ 515
Score = 38 (18.4 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 215 FHVNSEVNSVLSPRSESGGLGVS 237
>UNIPROTKB|B4DG92 [details] [associations]
symbol:PUM1 "cDNA FLJ56067, highly similar to Pumilio
homolog 1" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
HOGENOM:HOG000238461 HOVERGEN:HBG049462 EMBL:AL356320 EMBL:AL445235
UniGene:Hs.281707 HGNC:HGNC:14957 ChiTaRS:PUM1 EMBL:AK294477
IPI:IPI00939543 SMR:B4DG92 STRING:B4DG92 Ensembl:ENST00000373742
UCSC:uc010ogb.1 Uniprot:B4DG92
Length = 1127
Score = 1003 (358.1 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 188/338 (55%), Positives = 249/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 771 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 830
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 831 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 890
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 891 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 950
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 951 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 1009
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 1010 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 1069
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1070 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1107
Score = 276 (102.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 789 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 848
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 849 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 907
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 908 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 967
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 968 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 1021
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 1022 VVEKCVTHASRTERAV 1037
Score = 41 (19.5 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 422 AAAATNSANQQTTPQAQ 438
Score = 37 (18.1 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 696 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 745
>UNIPROTKB|E9PR38 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 IPI:IPI00909786 ProteinModelPortal:E9PR38 SMR:E9PR38
Ensembl:ENST00000424085 ArrayExpress:E9PR38 Bgee:E9PR38
Uniprot:E9PR38
Length = 944
Score = 1003 (358.1 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 188/338 (55%), Positives = 249/338 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 588 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 647
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 648 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 707
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGCRV
Sbjct: 708 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 767
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
IQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 768 IQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGN 826
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQK+
Sbjct: 827 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKM 886
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 887 IDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 924
Score = 276 (102.2 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 68/256 (26%), Positives = 130/256 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 606 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 665
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE ++ Q ++ E+ HV +
Sbjct: 666 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP-SDQQNEMVRELDGHVLKCVK 724
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++ ++
Sbjct: 725 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 784
Query: 946 NEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKH 1005
E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ + +
Sbjct: 785 EELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN 838
Query: 1006 IVSRIEKLIATGERRI 1021
+V + + ER +
Sbjct: 839 VVEKCVTHASRTERAV 854
Score = 41 (19.5 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 239 AAAATNSANQQTTPQAQ 255
Score = 37 (18.1 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 513 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 562
>UNIPROTKB|E7EWT3 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 IPI:IPI00939543 ProteinModelPortal:E7EWT3 SMR:E7EWT3
Ensembl:ENST00000423018 UCSC:uc010oga.1 ArrayExpress:E7EWT3
Bgee:E7EWT3 Uniprot:E7EWT3
Length = 1044
Score = 992 (354.3 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 686 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 745
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 746 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 805
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 806 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 865
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 866 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 924
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 925 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 984
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 985 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1024
Score = 275 (101.9 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 704 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 763
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 764 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 821
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 822 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 881
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 882 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 935
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 936 ASNVVEKCVTHASRTERAV 954
Score = 47 (21.6 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 52/218 (23%), Positives = 81/218 (37%)
Query: 304 ASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVGSNVQNDIE--LADIAA 361
A+A +S ++ TTP+AQ G V R GA ++ N Q L AA
Sbjct: 385 AAAATNSANQQTTPQAQ-------QGQQQV-LRGGASQRPLTPNQNQQGQQTDPLVAAAA 436
Query: 362 TLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSM-KQQFM---DKSTAD 417
S L+ A + + N + L T+NG + + QQ + +
Sbjct: 437 VNSALAFGQGLAAGMPAVAAAAASAN--GAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNN 494
Query: 418 NLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRT----SSPNLYSKMNSTGFGGSS 473
NLA S+ Y N + N +S++ S G + SS +L + + S GG
Sbjct: 495 NLASSSFY----GNNSLNSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSA-LGGFG 549
Query: 474 RSVGRQQNANISSLDFTNVSGD-YSVNQKLNSLVNHHF 510
+V + S D S D Y + + H F
Sbjct: 550 TAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTPIGHSF 587
Score = 37 (18.1 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 611 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 660
>MGI|MGI:1931749 [details] [associations]
symbol:Pum1 "pumilio 1 (Drosophila)" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 MGI:MGI:1931749
GO:GO:0005737 GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 eggNOG:COG5099
GeneTree:ENSGT00390000017241 CTD:9698 HOGENOM:HOG000238461
HOVERGEN:HBG049462 OMA:RHVVGVK OrthoDB:EOG4P8FHP ChiTaRS:PUM1
EMBL:AF321909 EMBL:AK122205 EMBL:AK052145 EMBL:BC048174
EMBL:BC050747 IPI:IPI00330262 IPI:IPI00400349 IPI:IPI00400350
IPI:IPI00400351 RefSeq:NP_001153075.1 RefSeq:NP_001153076.1
RefSeq:NP_001153077.1 RefSeq:NP_001153078.1 RefSeq:NP_109647.2
UniGene:Mm.440206 ProteinModelPortal:Q80U78 SMR:Q80U78
IntAct:Q80U78 STRING:Q80U78 PhosphoSite:Q80U78 PaxDb:Q80U78
PRIDE:Q80U78 Ensembl:ENSMUST00000030315 Ensembl:ENSMUST00000097862
Ensembl:ENSMUST00000097864 GeneID:80912 KEGG:mmu:80912
UCSC:uc008uzl.2 InParanoid:Q80U78 NextBio:350286 Bgee:Q80U78
CleanEx:MM_PUM1 Genevestigator:Q80U78 Uniprot:Q80U78
Length = 1189
Score = 1000 (357.1 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 189/340 (55%), Positives = 250/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE ATA E+ +F EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAA 890
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 950
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 1011 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1130 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
Score = 279 (103.3 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 849 EIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 908
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 909 FGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 966
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 967 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 1026
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 1027 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1080
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 1081 ASNVVEKCVTHASRTERAV 1099
Score = 38 (18.4 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 756 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 805
>UNIPROTKB|E2QVA9 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 CTD:9698 RefSeq:XP_852168.1
Ensembl:ENSCAFT00000017823 GeneID:478158 KEGG:cfa:478158
NextBio:20853526 Uniprot:E2QVA9
Length = 1224
Score = 993 (354.6 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 866 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 925
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 926 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 985
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1045
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 1046 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1104
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1105 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1164
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1165 KMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1204
Score = 275 (101.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 884 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 943
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 944 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 1001
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 1002 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 1061
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 1062 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1115
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 1116 ASNVVEKCVTHASRTERAV 1134
Score = 41 (19.5 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 517 AAAATNSANQQTTPQAQ 533
Score = 38 (18.4 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 234 FHVNSEVNSVLSPRSESGGLGVS 256
Score = 37 (18.1 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 791 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 840
>UNIPROTKB|F6XHY4 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 GeneTree:ENSGT00390000017241
OMA:RHVVGVK Ensembl:ENSCAFT00000017823 EMBL:AAEX03001673
Uniprot:F6XHY4
Length = 1162
Score = 993 (354.6 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 804 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 863
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 864 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 923
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 924 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 983
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 984 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1042
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1043 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1102
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1103 KMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1142
Score = 275 (101.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 822 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 881
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 882 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 939
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 940 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 999
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 1000 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1053
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 1054 ASNVVEKCVTHASRTERAV 1072
Score = 41 (19.5 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 482 AAAATNSANQQTTPQAQ 498
Score = 38 (18.4 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 729 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 778
>UNIPROTKB|Q2VB19 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0005737
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 eggNOG:COG5099 GeneTree:ENSGT00390000017241
HSSP:Q14671 EMBL:DQ275191 EMBL:AJ851393 IPI:IPI00581936
IPI:IPI00682137 RefSeq:NP_001012858.1 UniGene:Gga.22920
ProteinModelPortal:Q2VB19 SMR:Q2VB19 Ensembl:ENSGALT00000000834
Ensembl:ENSGALT00000035201 GeneID:419554 KEGG:gga:419554 CTD:9698
HOGENOM:HOG000238461 HOVERGEN:HBG049462 InParanoid:Q2VB19
OMA:RHVVGVK OrthoDB:EOG4P8FHP NextBio:20822590 Uniprot:Q2VB19
Length = 1189
Score = 995 (355.3 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 890
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQ 950
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 1011 RVIQRILEHCLPEQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1130 KMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
Score = 38 (18.4 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 756 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 805
>UNIPROTKB|E9PCJ0 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 CTD:9698 EMBL:AL356320 EMBL:AL445235
RefSeq:NP_001018494.1 UniGene:Hs.281707 DNASU:9698 GeneID:9698
KEGG:hsa:9698 HGNC:HGNC:14957 ChiTaRS:PUM1 GenomeRNAi:9698
NextBio:36439 IPI:IPI00941275 ProteinModelPortal:E9PCJ0 SMR:E9PCJ0
Ensembl:ENST00000426105 UCSC:uc001bsh.1 ArrayExpress:E9PCJ0
Bgee:E9PCJ0 Uniprot:E9PCJ0
Length = 1188
Score = 992 (354.3 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 950 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1009
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 1010 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1068
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1069 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1128
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1129 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1168
Score = 275 (101.9 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 848 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 907
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 908 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 965
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 966 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 1025
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 1026 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1079
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 1080 ASNVVEKCVTHASRTERAV 1098
Score = 41 (19.5 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 481 AAAATNSANQQTTPQAQ 497
Score = 38 (18.4 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 755 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 804
>UNIPROTKB|Q5T1Z4 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CH471059 GO:GO:0003723 HOGENOM:HOG000238461 HOVERGEN:HBG049462
OrthoDB:EOG4P8FHP EMBL:AL356320 EMBL:AL445235 UniGene:Hs.281707
HGNC:HGNC:14957 ChiTaRS:PUM1 IPI:IPI00646054 SMR:Q5T1Z4
STRING:Q5T1Z4 Ensembl:ENST00000373747 UCSC:uc001bsf.1
Uniprot:Q5T1Z4
Length = 1189
Score = 992 (354.3 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 890
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 950
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 1011 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1069
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1070 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1130 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1169
Score = 275 (101.9 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 849 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 908
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 909 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 966
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 967 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 1026
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 1027 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1080
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 1081 ASNVVEKCVTHASRTERAV 1099
Score = 41 (19.5 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 482 AAAATNSANQQTTPQAQ 498
Score = 38 (18.4 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 198 FHVNSEVNSVLSPRSESGGLGVS 220
Score = 37 (18.1 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 756 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 805
>UNIPROTKB|Q5T1Z8 [details] [associations]
symbol:PUM1 "Pumilio homolog 1 (Drosophila), isoform CRA_c"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:CH471059 GO:GO:0003723 HOGENOM:HOG000238461
HOVERGEN:HBG049462 OMA:RHVVGVK EMBL:AL356320 EMBL:AL445235
UniGene:Hs.281707 HGNC:HGNC:14957 ChiTaRS:PUM1 IPI:IPI00032355
SMR:Q5T1Z8 STRING:Q5T1Z8 Ensembl:ENST00000373741 UCSC:uc001bsk.1
Uniprot:Q5T1Z8
Length = 1224
Score = 992 (354.3 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 866 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 925
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 926 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 985
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 986 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1045
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 1046 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 1104
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 1105 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1164
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1165 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1204
Score = 275 (101.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 884 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 943
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 944 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 1001
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 1002 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 1061
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 1062 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1115
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 1116 ASNVVEKCVTHASRTERAV 1134
Score = 41 (19.5 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 517 AAAATNSANQQTTPQAQ 533
Score = 38 (18.4 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 496 YSVNQKLNSLVNHHFDTVGIGAT 518
+ VN ++NS+++ ++ G+G +
Sbjct: 234 FHVNSEVNSVLSPRSESGGLGVS 256
Score = 37 (18.1 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 791 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 840
>UNIPROTKB|H0YDK8 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 Ensembl:ENST00000498419 Uniprot:H0YDK8
Length = 900
Score = 992 (354.3 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 188/340 (55%), Positives = 249/340 (73%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A
Sbjct: 542 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 601
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 602 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 661
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV ALSTHPYGC
Sbjct: 662 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 721
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++
Sbjct: 722 RVIQRILEHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 780
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQ 972
G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MMKD + NYVVQ
Sbjct: 781 GNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 840
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
K+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 841 KMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 880
Score = 275 (101.9 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 69/259 (26%), Positives = 131/259 (50%)
Query: 766 QLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIE 825
++ GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 560 EIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFE 619
Query: 826 CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCN 882
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV
Sbjct: 620 FGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLK 677
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+DQ GN+V+Q +E +P +I GQ+ +S + V+++ L P++
Sbjct: 678 CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTL 737
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTY 1002
++ E+ T++ +++D +GNYV+Q VLE + I++ IR ++ VL ++ +
Sbjct: 738 PILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 791
Query: 1003 GKHIVSRIEKLIATGERRI 1021
++V + + ER +
Sbjct: 792 ASNVVEKCVTHASRTERAV 810
Score = 41 (19.5 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 304 ASAVGSSLSRSTTPEAQ 320
A+A +S ++ TTP+AQ
Sbjct: 193 AAAATNSANQQTTPQAQ 209
Score = 37 (18.1 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ SS S L
Sbjct: 467 HSQTPPPSLSSHGSSSSLNLGGLTNGSGRYISAAPGAEAKYRSASSASSL 516
>ZFIN|ZDB-GENE-030131-2074 [details] [associations]
symbol:pum1 "pumilio homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 ZFIN:ZDB-GENE-030131-2074 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
GeneTree:ENSGT00390000017241 EMBL:CABZ01057427 EMBL:CABZ01093012
EMBL:CU207343 IPI:IPI00995409 Ensembl:ENSDART00000122308
ArrayExpress:E7FFV0 Bgee:E7FFV0 Uniprot:E7FFV0
Length = 1154
Score = 975 (348.3 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 187/341 (54%), Positives = 248/341 (72%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L +I HV+EFS DQ+GSRFIQ KLE A+ E+ +F EI+ A
Sbjct: 795 SRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAA 854
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LM DVFGNYVIQKFFE G+ Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 855 YQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 914
Query: 796 QT--QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQ-VVALSTHPYG 852
Q +MV ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQ V ALSTHPYG
Sbjct: 915 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQQVFALSTHPYG 974
Query: 853 CRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQL 912
CRVIQR+LEHC T I+ +EI QH L QDQYGNYVIQHVLEHG+ +++ +++++
Sbjct: 975 CRVIQRILEHCLPEQTLSIL-EEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEI 1033
Query: 913 AGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVV 971
G ++ +SQ KFASNVVEKC+T ER +LI+E+ D + L MMKD + NYVV
Sbjct: 1034 RGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVV 1093
Query: 972 QKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
QK+++ + ++++ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1094 QKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1134
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 909 ITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGN 968
+ ++AG ++ SQ + S ++ L SP ERQL+ NE+L + + +M D FGN
Sbjct: 811 LREIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQ------LMVDVFGN 864
Query: 969 YVVQKVLETCD-DQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRI 1021
YV+QK E DQ L L RIR H+ L YG ++ + + I + ++ I
Sbjct: 865 YVIQKFFEFGSLDQKLALA-ERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVI 917
Score = 53 (23.7 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 282 SAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSG 329
S ++SPG V N+ PSHS S S++ L G ++GSG
Sbjct: 701 SFSSSPGPVGMPLPNQGPSHSLTPPPSLSTHGSSS-SLNLGGLTNGSG 747
Score = 41 (19.5 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 8/17 (47%), Positives = 14/17 (82%)
Query: 589 AQQNQQHEMQLLGKSGG 605
A QNQQ++ Q++ ++GG
Sbjct: 464 AAQNQQNQQQVM-RAGG 479
Score = 37 (18.1 bits), Expect = 5.3e-100, Sum P(2) = 5.3e-100
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 281 HSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGL 330
HS P L S + + + G +S + EA+ ++GS L
Sbjct: 720 HSLTPPPSLSTHGSSSSLNLGGLTNGSGRFISAAPGAEAKYRSATTGSSL 769
>POMBASE|SPAC1687.22c [details] [associations]
symbol:puf3 "RNA-binding protein Puf3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IEP] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 PomBase:SPAC1687.22c GO:GO:0005829 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CU329670_GR GO:GO:0005741 GO:GO:0033554 GO:GO:0003729
GO:GO:0000288 eggNOG:COG5099 RefSeq:NP_593141.2 HSSP:Q14671
ProteinModelPortal:O94462 SMR:O94462 EnsemblFungi:SPAC1687.22c.1
GeneID:2542300 KEGG:spo:SPAC1687.22c OrthoDB:EOG4RR9RJ
NextBio:20803362 Uniprot:O94462
Length = 732
Score = 893 (319.4 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 172/350 (49%), Positives = 242/350 (69%)
Query: 668 INMEGR--LSSS-LLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEK 724
IN G+ L S +L F NK R FELSDI+ +VV FSTDQ+GSRFIQQKL AT EE+
Sbjct: 367 INQNGQEFLQQSRVLYLFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEER 426
Query: 725 TRIFPEIIPHA-RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRV 783
+F EI + LM D+FGNYV+QK+FE G E Q+ L SQ+ GHV LSLQMYGCRV
Sbjct: 427 EAVFQEIASTSCLQLMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRV 486
Query: 784 IQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQV 843
+QKA+E + + Q Q++ ELDG V+ CV DQNGNHVIQK IECI +QFI+ + Q+
Sbjct: 487 VQKAIEYISPEHQVQLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQI 546
Query: 844 VALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPH 903
LS HPYGCRVIQR +EHC + +++I++E++ H+ L QDQYGNYV+QH+L G
Sbjct: 547 HVLSAHPYGCRVIQRAIEHCH--SERKLIIEELLPHILKLTQDQYGNYVVQHILRTGSES 604
Query: 904 ERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDEN-EPLQAMM 962
++ + + ++ +S KFASNVVE+C+++ S +R+ ++N+++ EN L MM
Sbjct: 605 DKKYIFDLMIDHLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAENCSILMLMM 664
Query: 963 KDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
KD + NYV+QK+L+ ++ +L++S I H++VLKK+TYGKH++ +E+
Sbjct: 665 KDKYANYVIQKLLDASPEEERDLLISYIYPHISVLKKFTYGKHLIMSVER 714
Score = 283 (104.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 77/276 (27%), Positives = 137/276 (49%)
Query: 754 HGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDG-SVMKCVH 812
H + + +L S + G+V+ S +G R IQ+ L +++ + E+ S ++ +
Sbjct: 385 HANKQRHFEL-SDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMM 443
Query: 813 DQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQII 872
D GN+V+QK E + + Q ++S G V +LS YGCRV+Q+ +E+ + Q+I
Sbjct: 444 DIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQVQLI 503
Query: 873 MDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKC 932
E+ HV + DQ GN+VIQ +E ++ L QI +S + V+++
Sbjct: 504 Q-ELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQRA 562
Query: 933 LTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRV 992
+ ER+L+I E+L + + +D +GNYVVQ +L T + + I +
Sbjct: 563 IEH-CHSERKLIIEELLPH------ILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMID 615
Query: 993 HLNVLKKYTYGKHIVSRIEKLIATGERRIGLSSSVS 1028
HL L + + ++V R I+ +RR L+ +S
Sbjct: 616 HLLFLSCHKFASNVVERCISYISDVDRRRILNKIIS 651
Score = 55 (24.4 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 51/189 (26%), Positives = 77/189 (40%)
Query: 209 SDRLIGVPAAGLGSRRKSFADILQEGLDRPASLSGHLSRPASCNAYGEIVGTGIADAHRA 268
S+ + G A S S D G RP+ LSG + P S ++ + H
Sbjct: 12 SESISGNSAFNFPSAPVSSLDTNNYGQRRPSLLSG--TSPTSSFFNSSMISSNYTFPH-- 67
Query: 269 GSCNGAESLEVLHSAAASPGLVRTKSHNRIPSHSFASAVGSS----LSRSTTPEAQLVGR 324
GS N SLE SP N IPS ++ S G S +S T P A G
Sbjct: 68 GS-NKQASLE-------SP----VSYSNPIPSLTWLSLDGDSPDSLVSTPTAPSANHHGN 115
Query: 325 SSGSGLPPVGSRVGAVE-KNGAVGSNVQNDIELADIAATLS-GLSLSNIRHADEVSHVQS 382
+G + + V + +V S N +E+ + S SLS + H+D + +++
Sbjct: 116 PFPNGKQSIKAMPSLVNLQEDSVISKFPNSLEVPFRKRSESTSSSLSGL-HSD-LRPLKT 173
Query: 383 QL--QLNPD 389
+L QLN +
Sbjct: 174 ELYGQLNSE 182
>WB|WBGene00004245 [details] [associations]
symbol:puf-9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0002009 GO:GO:0005737 GO:GO:0040010 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0017148 GO:GO:0040011
GO:GO:0040017 GO:GO:0003730 GO:GO:0006402 EMBL:FO081143
eggNOG:COG5099 HSSP:Q14671 GeneTree:ENSGT00680000100664 PIR:T26218
RefSeq:NP_508980.2 ProteinModelPortal:Q23191 SMR:Q23191
STRING:Q23191 PaxDb:Q23191 EnsemblMetazoa:W06B11.2.1
EnsemblMetazoa:W06B11.2.2 GeneID:180850 KEGG:cel:CELE_W06B11.2
UCSC:W06B11.2 CTD:180850 WormBase:W06B11.2 HOGENOM:HOG000020400
InParanoid:Q23191 OMA:TIKPHIA NextBio:911254 Uniprot:Q23191
Length = 703
Score = 898 (321.2 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 173/330 (52%), Positives = 232/330 (70%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKF 751
L DI ++V+EF+ DQ+GSRFIQQKLE A+ +K IF ++ +A LMTDVFGNYVIQKF
Sbjct: 340 LQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNYVIQKF 399
Query: 752 FEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCV 811
FE G QR QL + G+V++L+LQMYGCRVIQKALE V Q +++ E++G V+KCV
Sbjct: 400 FEFGNNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCV 459
Query: 812 HDQNGNHVIQKCIECIPQDRIQFIISSFY----GQVVALSTHPYGCRVIQRVLEHCDDAN 867
DQNGNHVIQK IE + +R+QFII +F V LS HPYGCRVIQRVLE+C++
Sbjct: 460 KDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQ 519
Query: 868 TQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQ-LAGQIVRMSQQKFAS 926
Q ++ D + H+ L DQYGNYVIQHV+EHG P ++ ++ ++ +++ +Q KFAS
Sbjct: 520 KQPVL-DALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFAS 578
Query: 927 NVVEKCLTFGSPEERQLLINEMLGS-TDENEPLQAMMKDPFGNYVVQKVLETCDDQSLEL 985
NV+EKCLTFG ER L+I+++ G D + PL MMKDPF NYVVQK+L+ D Q +
Sbjct: 579 NVIEKCLTFGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHRKK 638
Query: 986 ILSRIRVHLNVLKKYTYGKHIVSRIEKLIA 1015
I I+ H+ L+KY +GKHI+ ++EK A
Sbjct: 639 ITLTIKPHIATLRKYNFGKHILLKLEKYFA 668
Score = 245 (91.3 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 71/264 (26%), Positives = 124/264 (46%)
Query: 681 EFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMT 740
EF N+ R+ + I +V++ + YG R IQ+ LE + + I E+ +
Sbjct: 401 EFGNNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVK 460
Query: 741 DVFGNYVIQKFFEHGTESQRAQL-----ASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
D GN+VIQK E E +R Q + +V LS+ YGCRVIQ+ LE + +Q
Sbjct: 461 DQNGNHVIQKVIER-VEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQ 519
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIEC-IPQDRIQFIISSFYGQVVALSTHPYGCR 854
+ ++ L + + V DQ GN+VIQ IE P D+ Q + ++ + H +
Sbjct: 520 KQPVLDALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFASN 579
Query: 855 VIQRVLEHCDDANTQQIIMDEIMQH-------VCNLAQDQYGNYVIQHVLEHGKPHERTT 907
VI++ L A + +I+D++ + + +D + NYV+Q +L+ P R
Sbjct: 580 VIEKCLTFGGHAE-RNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHRKK 638
Query: 908 VITQLAGQIVRMSQQKFASNVVEK 931
+ + I + + F +++ K
Sbjct: 639 ITLTIKPHIATLRKYNFGKHILLK 662
Score = 234 (87.4 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 66/263 (25%), Positives = 128/263 (48%)
Query: 759 QRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNH 818
Q + + +V+ + +G R IQ+ LE + + + + + + + D GN+
Sbjct: 335 QTPKTLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNY 394
Query: 819 VIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ 878
VIQK E ++ ++ + G V+ L+ YGCRVIQ+ LE+ ++ Q I+ E+
Sbjct: 395 VIQKFFEFGNNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEE-KYQHEILGEMEG 453
Query: 879 HVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQL----AGQIVRMSQQKFASNVVEKCLT 934
V +DQ GN+VIQ V+E +P +I + + +S + V+++ L
Sbjct: 454 QVLKCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLE 513
Query: 935 FGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHL 994
+ + E++Q +++ + L+ ++ D +GNYV+Q V+E E I+ + +
Sbjct: 514 YCNEEQKQPVLDAL------QIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDV-ISD 566
Query: 995 NVLKKYTYGKHIVSRIEKLIATG 1017
++LK + K + IEK + G
Sbjct: 567 DLLK-FAQHKFASNVIEKCLTFG 588
Score = 41 (19.5 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 399 SNGHNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSP 458
S GH S Q KS + + +T + NG+V NL S +S Q N T P
Sbjct: 27 SGGH-PSQDQGHSPKSESFGQSVTTAF------NGMVDNLVGSPSSSVQQRNYFTTTPFP 79
>ASPGD|ASPL0000000865 [details] [associations]
symbol:AN6587 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000110 eggNOG:COG5099 OrthoDB:EOG4RR9RJ
RefSeq:XP_664191.1 ProteinModelPortal:Q5AYP3
EnsemblFungi:CADANIAT00007365 GeneID:2870653 KEGG:ani:AN6587.2
HOGENOM:HOG000201252 OMA:SHKSSPQ Uniprot:Q5AYP3
Length = 849
Score = 769 (275.8 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 157/339 (46%), Positives = 221/339 (65%)
Query: 678 LLDEFKTN-KTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHAR 736
+L +F+ + K + FEL DI H+VEFS DQYGSRF+QQK+E A ++EK R+F EI+P+
Sbjct: 442 VLADFRLHGKNKRFELKDIYGHIVEFSGDQYGSRFLQQKIETANSDEKDRVFREILPNFL 501
Query: 737 TLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQ 796
L D+FGNYV QK +EHG ++Q+ + + V++LSL YGCRV+QKALE V DQQ
Sbjct: 502 QLAQDIFGNYVAQKLYEHGNQTQKKMMTEDMRSKVVKLSLSPYGCRVVQKALEHVLTDQQ 561
Query: 797 TQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVI 856
+V E+ V++CV Q+GNHVIQK E +P + ++ SF GQV STH YGCRVI
Sbjct: 562 AWLVREIQPQVLECVESQHGNHVIQKVFEYVPTQYTKGLVDSFRGQVERQSTHSYGCRVI 621
Query: 857 QRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQI 916
QR+LE C+D + ++ I+ EI L +DQYGNYVIQH+++ G+ +R+ +I + ++
Sbjct: 622 QRMLEFCEDVD-RRFILAEIRACAPRLIEDQYGNYVIQHIIQSGEEEDRSFMIEMVKQKL 680
Query: 917 VRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEP-LQAMMKDPFGNYVVQKVL 975
+ S+ KFASNVVEK + FG+ +RQ +I + T+ +E L +M D +GNYV QKVL
Sbjct: 681 LWYSKHKFASNVVEKSIEFGNEAQRQDIITRLTAKTEGHETQLIELMADQYGNYVFQKVL 740
Query: 976 ETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLI 1014
++ RI+ L LKK GK I + IEKLI
Sbjct: 741 GHLSGVERAALVDRIKPLLVHLKKSNCGKQIAA-IEKLI 778
Score = 291 (107.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 79/264 (29%), Positives = 129/264 (48%)
Query: 685 NKTRSFELS-DIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVF 743
N+T+ ++ D+ VV+ S YG R +Q+ LE +++ + EI P +
Sbjct: 521 NQTQKKMMTEDMRSKVVKLSLSPYGCRVVQKALEHVLTDQQAWLVREIQPQVLECVESQH 580
Query: 744 GNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH-VDQQTQMVAE 802
GN+VIQK FE+ L G V R S YGCRVIQ+ LE VD++ ++AE
Sbjct: 581 GNHVIQKVFEYVPTQYTKGLVDSFRGQVERQSTHSYGCRVIQRMLEFCEDVDRRF-ILAE 639
Query: 803 LDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEH 862
+ + + DQ GN+VIQ I+ ++ F+I +++ S H + V+++ +E
Sbjct: 640 IRACAPRLIEDQYGNYVIQHIIQSGEEEDRSFMIEMVKQKLLWYSKHKFASNVVEKSIEF 699
Query: 863 CDDANTQQIIMDEIMQ---HVCNLAQ---DQYGNYVIQHVLEHGKPHERTTVITQLAGQI 916
++A Q II + H L + DQYGNYV Q VL H ER ++ ++ +
Sbjct: 700 GNEAQRQDIITRLTAKTEGHETQLIELMADQYGNYVFQKVLGHLSGVERAALVDRIKPLL 759
Query: 917 VRMSQQKFASNV--VEKCLTFGSP 938
V + + + +EK + SP
Sbjct: 760 VHLKKSNCGKQIAAIEKLIGDSSP 783
Score = 200 (75.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 48/192 (25%), Positives = 95/192 (49%)
Query: 833 QFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYV 892
+F + YG +V S YG R +Q+ +E + ++ EI+ + LAQD +GNYV
Sbjct: 454 RFELKDIYGHIVEFSGDQYGSRFLQQKIETANSDEKDRVFR-EILPNFLQLAQDIFGNYV 512
Query: 893 IQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGST 952
Q + EHG ++ + + ++V++S + VV+K L +++ L+ E+
Sbjct: 513 AQKLYEHGNQTQKKMMTEDMRSKVVKLSLSPYGCRVVQKALEHVLTDQQAWLVREI---- 568
Query: 953 DENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
+ + L+ + + GN+V+QKV E Q + ++ R + ++YG ++ R+ +
Sbjct: 569 -QPQVLECV-ESQHGNHVIQKVFEYVPTQYTKGLVDSFRGQVERQSTHSYGCRVIQRMLE 626
Query: 1013 LIATGERRIGLS 1024
+RR L+
Sbjct: 627 FCEDVDRRFILA 638
Score = 49 (22.3 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 145 GGGSSLGDIADWRKKGVNGGDRSSLFSMQPGISVL-QAENDLMELRNAARRNLSRDASAE 203
GG SS G WR + RS++ + S+L +E+D ++R RN+
Sbjct: 22 GGNSSWGMSDIWRNNMDDSVARSTIEGISGSSSLLPSSESDGWDIR----RNVP------ 71
Query: 204 WLERGSDRLIGVPAAGLGSRRKSFADILQEGLDRPASLSGHLSRPASCNAYGEIVGTG 261
W R G+ + + +R +L +G D S + ++ S + G GTG
Sbjct: 72 WPSRAQGN--GMATSPVQNRSNDLGGVLVDGNDA----SSYFTQSVS-STLGPSPGTG 122
>CGD|CAL0000998 [details] [associations]
symbol:PUF3 species:5476 "Candida albicans" [GO:0032473
"external side of mitochondrial outer membrane" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0008298 "intracellular
mRNA localization" evidence=IEA] [GO:0051646 "mitochondrion
localization" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IEA]
[GO:0009060 "aerobic respiration" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 CGD:CAL0000998 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 eggNOG:COG5099 EMBL:AACQ01000198
EMBL:AACQ01000197 RefSeq:XP_711443.1 RefSeq:XP_711460.1
ProteinModelPortal:Q59P09 GeneID:3646939 GeneID:3646950
KEGG:cal:CaO19.1795 KEGG:cal:CaO19.9361 Uniprot:Q59P09
Length = 929
Score = 777 (278.6 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 158/336 (47%), Positives = 227/336 (67%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL+E ++N + ++L DI H +EF+ DQ+GSRFIQQKL AT EEK IF EI +
Sbjct: 567 SPLLEEVRSNP-KPYQLKDIYGHAIEFTKDQHGSRFIQQKLPEATEEEKETIFNEIWEIS 625
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQK+FE+GT +Q+ L + GH+ LSLQMYGCRV+Q+ALE + +
Sbjct: 626 YELMTDVFGNYVIQKYFEYGTTTQKQVLLESMIGHIHELSLQMYGCRVVQRALEAIDNEG 685
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECI-PQDRIQFIISSFYGQVVALSTHPYGCR 854
Q +++ EL ++ C DQNGNHVIQK IE I P +I++I++S Q+ LSTHPYGCR
Sbjct: 686 QLRIIEELKDHILICCKDQNGNHVIQKSIEKIKPFSQIRYILTSLDNQIYHLSTHPYGCR 745
Query: 855 VIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAG 914
VIQR+LE+ D + Q++I+ ++ + L DQYGNYVIQH+LE+G E+ ++ + G
Sbjct: 746 VIQRLLEY-SDIDDQKLILSQLNNFLYYLILDQYGNYVIQHILENGTQEEKEPILEIVLG 804
Query: 915 QIVRMSQQKFASNVVEKCLTFGSPEERQLLINEM-------LGSTD-------ENEPLQA 960
+V+ S+ KFASNV+EKC+ FG +R+ +++E+ LG D E+ PL
Sbjct: 805 SVVQFSKHKFASNVIEKCIKFGDINQRKRILHEVMLGNETILGDDDIDGEPVKEDSPLAL 864
Query: 961 MMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNV 996
M+KD FGNYV+QK++E D +L++ +I+ L++
Sbjct: 865 MVKDQFGNYVIQKLVEAFDGDERKLLIIKIKKCLSL 900
Score = 295 (108.9 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 75/277 (27%), Positives = 137/277 (49%)
Query: 744 GNYVIQK-FFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE 802
GN++ + E + + + GH + + +G R IQ+ L +++ + E
Sbjct: 561 GNHIYRSPLLEEVRSNPKPYQLKDIYGHAIEFTKDQHGSRFIQQKLPEATEEEKETIFNE 620
Query: 803 LDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEH 862
+ + + D GN+VIQK E + Q ++ S G + LS YGCRV+QR LE
Sbjct: 621 IWEISYELMTDVFGNYVIQKYFEYGTTTQKQVLLESMIGHIHELSLQMYGCRVVQRALEA 680
Query: 863 CDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTT-VITQLAGQIVRMSQ 921
D+ +II +E+ H+ +DQ GN+VIQ +E KP + ++T L QI +S
Sbjct: 681 IDNEGQLRII-EELKDHILICCKDQNGNHVIQKSIEKIKPFSQIRYILTSLDNQIYHLST 739
Query: 922 QKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQ 981
+ V+++ L + ++++L+++++ N L ++ D +GNYV+Q +LE +
Sbjct: 740 HPYGCRVIQRLLEYSDIDDQKLILSQL------NNFLYYLILDQYGNYVIQHILENGTQE 793
Query: 982 SLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGE 1018
E IL + + K+ + ++ IEK I G+
Sbjct: 794 EKEPILEIVLGSVVQFSKHKFASNV---IEKCIKFGD 827
Score = 40 (19.1 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 432 NGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGF 469
N N+N++ NSN + S N ++ +T F
Sbjct: 241 NSDTVNINSTTTNSNHDATKNQGNYSHNFWNPAAATSF 278
Score = 40 (19.1 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 38/166 (22%), Positives = 65/166 (39%)
Query: 399 SNGHNQSMKQQF-MDKSTADNLAFSTHYID---------FTRKNGIVPNLNASAINSNGQ 448
S+GHN ++ + +T +N + ID F N P +++ + G
Sbjct: 8 SSGHNSPIQNNLSLASTTTNNTSQYKSVIDQVDPDVIRLFANSNSFDPLSSSTGPGTTGH 67
Query: 449 VNILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNANISSLDFTNVSGDYSVNQKLNSLVNH 508
+ L TS + N S G ++ A +S++ V G+ + + N + N
Sbjct: 68 TSGL--TSGTDRRLSFNDGSDIIESDFFGFKRGA-LSAIT-APVVGNGNNGRHHNQVTNK 123
Query: 509 HFDTVGIGATRNLNGMVNQVALDFHSPPMDPRYAQYLQRTSDYATR 554
+F T I G+ N+ H PP D + Q +D ATR
Sbjct: 124 NFGTASISG-----GIANR-----H-PPQDS-FLQKFSSVAD-ATR 156
Score = 37 (18.1 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 437 NLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGS 472
N N + NS+G + N K N+T GG+
Sbjct: 527 NNNNNNNNSSGSTPGVGSKRKGNFKGKNNTTNGGGN 562
>SGD|S000003936 [details] [associations]
symbol:PUF3 "Protein of the mitochondrial outer surface"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032473
"external side of mitochondrial outer membrane" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IMP] [GO:0051646
"mitochondrion localization" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SGD:S000003936 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005741 GO:GO:0003729
EMBL:BK006945 GO:GO:0009060 GO:GO:0007005 GO:GO:0008298
GO:GO:0000288 EMBL:X97560 EMBL:X91488 GO:GO:0051646 eggNOG:COG5099
GO:GO:0032473 OrthoDB:EOG4RR9RJ EMBL:Z73117 EMBL:Z73118 PIR:S64755
RefSeq:NP_013088.1 PDB:3K49 PDB:3K4E PDBsum:3K49 PDBsum:3K4E
ProteinModelPortal:Q07807 SMR:Q07807 DIP:DIP-4449N IntAct:Q07807
MINT:MINT-552454 STRING:Q07807 PaxDb:Q07807 PeptideAtlas:Q07807
EnsemblFungi:YLL013C GeneID:850647 KEGG:sce:YLL013C CYGD:YLL013c
GeneTree:ENSGT00680000100664 OMA:FIPYLIQ EvolutionaryTrace:Q07807
NextBio:966590 Genevestigator:Q07807 GermOnline:YLL013C
Uniprot:Q07807
Length = 879
Score = 714 (256.4 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 155/348 (44%), Positives = 221/348 (63%)
Query: 685 NKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFG 744
N + L DI H +EF DQ+GSRFIQ++L + A EK IF EI A L DVFG
Sbjct: 529 NSNSNMSLKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFG 588
Query: 745 NYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELD 804
NYVIQKFFE G++ Q+ L Q G++ +LSLQMY CRVIQKALE + +Q+ ++V EL
Sbjct: 589 NYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELS 648
Query: 805 GSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCD 864
SV++ + DQNGNHVIQK IE IP +++ FI+SS G + LSTH YGCRVIQR+LE
Sbjct: 649 DSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEF-G 707
Query: 865 DANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTV------ITQLAGQIVR 918
+ Q+ I++E+ + L QDQYGNYVIQ+VL+ + + V I +A +V
Sbjct: 708 SSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVE 767
Query: 919 MSQQKFASNVVEKCLTFGSPEERQLLINEMLG-------STDENEPLQAMMKDPFGNYVV 971
S+ KFASNVVEK + +GS ++ L+I+++L + +++ P+ M+KD F NYV+
Sbjct: 768 YSKHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVI 827
Query: 972 QKVLETCDDQSLELILSRIRVHLNVLKKY-TYGKHIVSRIEKLIATGE 1018
QK++ + + +LI+ IR +L+ L K + G ++ +EKL A E
Sbjct: 828 QKLVNVSEGEGKKLIVIAIRAYLDKLNKSNSLGNRHLASVEKLAALVE 875
Score = 210 (79.0 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 61/219 (27%), Positives = 102/219 (46%)
Query: 681 EFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMT 740
EF + ++ + ++ + S Y R IQ+ LE + ++ + E+ ++
Sbjct: 597 EFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIK 656
Query: 741 DVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMV 800
D GN+VIQK E + + S LTGH+ LS YGCRVIQ+ LE + Q ++
Sbjct: 657 DQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESIL 716
Query: 801 AELDGSVMKCVHDQNGNHVIQKCIECIPQDRI---------QFIISSFYGQVVALSTHPY 851
EL + + DQ GN+VIQ ++ QD+ Q II + VV S H +
Sbjct: 717 NELKDFIPYLIQDQYGNYVIQYVLQ---QDQFTNKEMVDIKQEIIETVANNVVEYSKHKF 773
Query: 852 GCRVIQRVLEHCDDANTQQIIMDEIM----QHVCNLAQD 886
V+++ + + N + +I+ +I+ H NL D
Sbjct: 774 ASNVVEKSILY-GSKNQKDLIISKILPRDKNHALNLEDD 811
Score = 137 (53.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 38/162 (23%), Positives = 77/162 (47%)
Query: 855 VIQRVLEHCDDANTQQ-IIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
+++++ D N+ + + +I H +DQ+G+ IQ L E+ + ++
Sbjct: 517 LLEQLRNSSSDKNSNSNMSLKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIR 576
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQK 973
+ +S F + V++K FGS ++ L+++ G+ + L M + V+QK
Sbjct: 577 DDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQ---LSLQM---YACRVIQK 630
Query: 974 VLETCD-DQSLELILSRIRVHLNVLKKYTYGKHIVSR-IEKL 1013
LE D +Q +EL+L L ++K G H++ + IE +
Sbjct: 631 ALEYIDSNQRIELVLELSDSVLQMIKDQN-GNHVIQKAIETI 671
Score = 49 (22.3 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 353 DIELADIAATLSGLSLSN 370
D+ELA I ++LS LS SN
Sbjct: 10 DMELASIVSSLSALSHSN 27
Score = 42 (19.8 bits), Expect = 1.1e-76, Sum P(3) = 1.1e-76
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 548 TSDYATRSAASASDPFAARNHFGSSLGDSDGLQKAHLELLLAQQNQQHEMQLL 600
T + + ++A+S S+ A NH S H + L QQ H LL
Sbjct: 472 TKNTSKKNASSKSNESTANNH------KSHSHSHPHSQSLQQQQQTYHRSPLL 518
Score = 42 (19.8 bits), Expect = 6.5e-73, Sum P(2) = 6.5e-73
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 7 IEMLPNLEDGLRGQNGNLSLEDSLQTELELILQRQPDRQIVNRE 50
+E L N + N N+SL+D LE + R + RE
Sbjct: 518 LEQLRNSSSD-KNSNSNMSLKDIFGHSLEFCKDQHGSR-FIQRE 559
Score = 38 (18.4 bits), Expect = 1.6e-75, Sum P(3) = 1.6e-75
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 309 SSLSRSTTPEAQLVGRSSGSG 329
+ L+R+TT L SS SG
Sbjct: 228 NKLNRNTTNSGSLYHSSSNSG 248
>WB|WBGene00004244 [details] [associations]
symbol:puf-8 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0007276 "gamete
generation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0040022 "feminization of hermaphroditic
germ-line" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007140 "male meiosis" evidence=IMP] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007283 GO:GO:0003723
GO:GO:0042127 GO:GO:0007140 GO:GO:0040027 GO:GO:0040020
GO:GO:0040022 GO:GO:0043186 eggNOG:COG5099
GeneTree:ENSGT00680000100664 EMBL:FO080733 PIR:T15717
RefSeq:NP_495523.3 ProteinModelPortal:Q09487 SMR:Q09487
DIP:DIP-27165N MINT:MINT-1110716 STRING:Q09487 PaxDb:Q09487
EnsemblMetazoa:C30G12.7 GeneID:174197 KEGG:cel:CELE_C30G12.7
UCSC:C30G12.7 CTD:174197 WormBase:C30G12.7 InParanoid:Q09487
OMA:KDSIFDE NextBio:882961 Uniprot:Q09487
Length = 535
Score = 694 (249.4 bits), Expect = 4.1e-68, P = 4.1e-68
Identities = 135/350 (38%), Positives = 221/350 (63%)
Query: 671 EGRLSSSLLDEFKTNKT--RSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAE-EKTRI 727
E + LL ++ N ++ +LSDI +++F+ DQ GSRFIQQ+L ++ EK I
Sbjct: 169 EPTTTDDLLTRYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSI 228
Query: 728 FPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKA 787
F E++ +A L+ D+FGNYV+QKFFE+G E A+L + V + QMY CRV+QKA
Sbjct: 229 FDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKA 288
Query: 788 LEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFY---GQVV 844
LE ++ Q ++++++ + +C+ DQNGNHV+QK IE + +QFI+ + +
Sbjct: 289 LEKINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIY 348
Query: 845 ALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHE 904
+S PYGCRV+QR LEHC + T+ +I +I + +A +QYGNYV+QHV+EHG +
Sbjct: 349 EMSVDPYGCRVVQRCLEHCSPSQTKPVI-GQIHKRFDEIANNQYGNYVVQHVIEHGSEED 407
Query: 905 RTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQA-MMK 963
R ++T+++ + + K++SNV+EKCL G+ + +++ + + P+ MMK
Sbjct: 408 RMVIVTRVSNNLFEFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMK 467
Query: 964 DPFGNYVVQKVLE-TCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
D + NYVVQK+ + +Q ELIL+ +R H+ VL+++ +GKHI++++EK
Sbjct: 468 DQYANYVVQKMFDQVTSEQRRELILT-VRPHIPVLRQFPHGKHILAKLEK 516
>ZFIN|ZDB-GENE-081031-76 [details] [associations]
symbol:pum2 "pumilio homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 ZFIN:ZDB-GENE-081031-76
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
GeneTree:ENSGT00390000017241 EMBL:CABZ01062788 EMBL:CABZ01062789
EMBL:CABZ01062790 EMBL:CU468963 IPI:IPI00864826
Ensembl:ENSDART00000086578 Bgee:F1R4Q6 Uniprot:F1R4Q6
Length = 1206
Score = 655 (235.6 bits), Expect = 3.8e-61, Sum P(2) = 3.8e-61
Identities = 151/354 (42%), Positives = 211/354 (59%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHA 735
S LL++F+ N+ + +L D+ H+VEFS DQ+GSRFIQQKLE AT+ E+ +F EI+ A
Sbjct: 824 SRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAA 883
Query: 736 RTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
LMTDVFGNYVIQKFFE G+ Q+ LA+++ GHVL L+LQMYGCRVIQKALE + DQ
Sbjct: 884 YQLMTDVFGNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 943
Query: 796 Q--TQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGC 853
Q + +V ELDG V+KCV DQNGNHV+QKCIEC+ +QFII +F GQV LSTHPYGC
Sbjct: 944 QVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGC 1003
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
RVIQR+LEHC T I+ +E+ QH L Q N +Q + T
Sbjct: 1004 RVIQRILEHCTQEQTLPIL-EELHQHSEQLGQK---NTSVQL---------KVTFKGLRI 1050
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQK 973
+ + ++ + V++ L G PE++ ++ E+ G L N V +
Sbjct: 1051 CSFDLLFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKV-----LALSQHKFASNVVEKC 1105
Query: 974 VLETCD-DQSL---ELILSRIRVH--LNVLKKYTYGKHIVSRIEKLIATGERRI 1021
V+ + +++L E+ + H L + K Y ++V R+ + +R+I
Sbjct: 1106 VIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKI 1159
Score = 454 (164.9 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
Identities = 111/339 (32%), Positives = 184/339 (54%)
Query: 681 EFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMT 740
E T+ R +I+ + TD +G+ IQ+ E +A++K + I H L
Sbjct: 865 ERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALATRIRGHVLPLAL 924
Query: 741 DVFGNYVIQKFFEHGTESQR--AQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQ 798
++G VIQK E + Q+ + + +L GHVL+ G V+QK +E V Q Q
Sbjct: 925 QMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQ-PQALQ 983
Query: 799 MVAE-LDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQ 857
+ + G V G VIQ+ +E Q++ I+ H + ++ Q
Sbjct: 984 FIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEEL---------HQHSEQLGQ 1034
Query: 858 RVLEHCDDANTQQIIMDEIMQHVCN---LAQDQYGNYVIQHVLEHGKPHERTTVITQLAG 914
+ + + Q + + ++ +C+ L +DQYGNYVIQHVLEHG+P +++ ++ ++ G
Sbjct: 1035 K------NTSVQLKVTFKGLR-ICSFDLLFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRG 1087
Query: 915 QIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQK 973
+++ +SQ KFASNVVEKC+ S ER LLI+E+ D + L MMKD + NYVVQ+
Sbjct: 1088 KVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQR 1147
Query: 974 VLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
+++ + ++I+ +IR H+ L+KYTYGKHI++++EK
Sbjct: 1148 MIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEK 1186
Score = 46 (21.3 bits), Expect = 3.8e-61, Sum P(2) = 3.8e-61
Identities = 21/69 (30%), Positives = 27/69 (39%)
Query: 281 HSAAASP-----GLVRTKSHNRIPSHSFASAVGSSLSRSTTPEA----------QLVGRS 325
H++AA P G T + S A GSS+S ST A +L R
Sbjct: 657 HTSAAPPPSTSLGFSSTSGSLGVGLGSALGAFGSSVSSSTNSSAVRRDSLLASSELYKRG 716
Query: 326 SGSGLPPVG 334
G L P+G
Sbjct: 717 GGGSLTPIG 725
Score = 38 (18.4 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 17/49 (34%), Positives = 20/49 (40%)
Query: 281 HSAAASPGLVRTKSHNRIPS-HSFASAVGSSLSRSTTPEAQLVGRSSGS 328
HS P + + SH S H GS S P A+ RSSGS
Sbjct: 747 HSPLTPPPSLPS-SHGSSSSIHLGGLPNGSGRYISAAPGAEAKYRSSGS 794
>ASPGD|ASPL0000057098 [details] [associations]
symbol:AN10071 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:BN001308 GO:GO:0003723
EnsemblFungi:CADANIAT00002391 OMA:HKFSSNV Uniprot:C8VU22
Length = 650
Score = 530 (191.6 bits), Expect = 4.7e-54, Sum P(3) = 4.7e-54
Identities = 110/307 (35%), Positives = 179/307 (58%)
Query: 705 DQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLA 764
DQ+G R++Q+KLE ++ IF E H LMTD FGNY+ QK E+ + QR L
Sbjct: 247 DQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSNDEQRTVLV 306
Query: 765 SQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKCVHDQNGNHVIQKC 823
++ +++++L +G R +QK +E + ++QTQ V + L V++ V D NGNHVIQKC
Sbjct: 307 NKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLNGNHVIQKC 366
Query: 824 IECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNL 883
+ + ++ QFI + Q V + TH +GC V+QR ++H A ++I ++I ++ L
Sbjct: 367 LNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLI-EQITENAFAL 425
Query: 884 AQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQL 943
QD +GNYV+Q++L+ + + + +I ++S+ KF+SNV+EKCL E R+
Sbjct: 426 VQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEKCLRTADEEMRRQ 485
Query: 944 LINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYG 1003
+I EML DE L+ M++D + NYVVQ ++ D + I+ I L L+ +G
Sbjct: 486 MIEEMLAG-DE---LEKMLRDSYANYVVQTAMDYADPATRARIVKYIEPILPSLRGTPHG 541
Query: 1004 KHIVSRI 1010
+ I S+I
Sbjct: 542 RRIGSKI 548
Score = 268 (99.4 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 65/248 (26%), Positives = 122/248 (49%)
Query: 774 LSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQ 833
L +GCR +Q+ LE + DQ + AE V++ + D GN++ QK +E ++
Sbjct: 244 LCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSNDEQRT 303
Query: 834 FIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVI 893
+++ Q+V ++ + +G R +Q+++E Q ++D + HV L QD GN+VI
Sbjct: 304 VLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLNGNHVI 363
Query: 894 QHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD 953
Q L + + + Q V + + V+++C+ S +R LI ++
Sbjct: 364 QKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQIT---- 419
Query: 954 ENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
EN A+++DPFGNYVVQ +L+ + + E + + L K+ + ++ IEK
Sbjct: 420 ENA--FALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNV---IEKC 474
Query: 1014 IATGERRI 1021
+ T + +
Sbjct: 475 LRTADEEM 482
Score = 239 (89.2 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 55/239 (23%), Positives = 121/239 (50%)
Query: 674 LSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTR-IFPEII 732
L LL E+ ++ R+ ++ +V+ + +Q+G+R +Q+ +E + EE+T+ + +
Sbjct: 289 LCQKLL-EYSNDEQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALK 347
Query: 733 PHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTG-HVLRLSLQMYGCRVIQKALEVV 791
H L+ D+ GN+VIQK T ++++Q G + + +GC V+Q+ ++
Sbjct: 348 DHVVELVQDLNGNHVIQKCLNRLT-AEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHA 406
Query: 792 HVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPY 851
Q+ +++ ++ + V D GN+V+Q ++ + + F ++ LS H +
Sbjct: 407 SGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKF 466
Query: 852 GCRVIQRVLEHCDDANTQQIIMDEIM-QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVI 909
VI++ L D+ +Q+I + + + + +D Y NYV+Q +++ P R ++
Sbjct: 467 SSNVIEKCLRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQTAMDYADPATRARIV 525
Score = 212 (79.7 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 69/284 (24%), Positives = 130/284 (45%)
Query: 698 HVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEH-GT 756
HV+E TD +G+ Q+ LE + E++T + + P + + G +QK E T
Sbjct: 276 HVIELMTDPFGNYLCQKLLEYSNDEQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFIST 335
Query: 757 ESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNG 816
E Q + L HV+ L + G VIQK L + ++ +Q + + G+ +CV
Sbjct: 336 EEQTQTVIDALKDHVVELVQDLNGNHVIQKCLNRLTAEK-SQFIYDAVGA--QCVTVGTH 392
Query: 817 NH---VIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIM 873
H V+Q+CI+ + +I AL P+G V+Q +L+ + T+ +
Sbjct: 393 RHGCCVLQRCIDHASGAQRARLIEQITENAFALVQDPFGNYVVQYILDLAEARFTEPLCR 452
Query: 874 DEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQ-LAG-QIVRMSQQKFASNVVEK 931
E + + L++ ++ + VI+ L R +I + LAG ++ +M + +A+ VV+
Sbjct: 453 -EFLSRIPKLSKHKFSSNVIEKCLRTADEEMRRQMIEEMLAGDELEKMLRDSYANYVVQT 511
Query: 932 CLTFGSPEERQLLINEMLGSTDENEP-LQAMMKDPFGNYVVQKV 974
+ + P R ++ + EP L ++ P G + K+
Sbjct: 512 AMDYADPATRARIVKYI-------EPILPSLRGTPHGRRIGSKI 548
Score = 208 (78.3 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 64/273 (23%), Positives = 118/273 (43%)
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQT 797
L D G +Q+ E + Q + ++ HV+ L +G + QK LE + +Q+T
Sbjct: 244 LCKDQHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSNDEQRT 303
Query: 798 QMVAELDGSVMKCVHDQNGNHVIQKCIECIP-QDRIQFIISSFYGQVVALSTHPYGCRVI 856
+V + ++K +Q+G +QK IE I +++ Q +I + VV L G VI
Sbjct: 304 VLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLNGNHVI 363
Query: 857 QRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQI 916
Q+ L A Q I D + + ++G V+Q ++H +R +I Q+
Sbjct: 364 QKCLNRLT-AEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQITENA 422
Query: 917 VRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLE 976
+ Q F + VV+ L + L E L + + K F + V++K L
Sbjct: 423 FALVQDPFGNYVVQYILDLAEARFTEPLCREFLSR------IPKLSKHKFSSNVIEKCLR 476
Query: 977 TCDDQSLELILSRIRV--HLNVLKKYTYGKHIV 1007
T D++ ++ + L + + +Y ++V
Sbjct: 477 TADEEMRRQMIEEMLAGDELEKMLRDSYANYVV 509
Score = 191 (72.3 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 49/194 (25%), Positives = 97/194 (50%)
Query: 836 ISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQH 895
I + ++ L +GCR +QR LE +D + Q+I E HV L D +GNY+ Q
Sbjct: 234 IEYYRNEIYGLCKDQHGCRYLQRKLEERND-DQLQMIFAETHSHVIELMTDPFGNYLCQK 292
Query: 896 VLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDEN 955
+LE+ +RT ++ + A Q+V+++ + + ++K + F S EE+ + + L
Sbjct: 293 LLEYSNDEQRTVLVNKAAPQLVKIALNQHGTRALQKMIEFISTEEQTQTVIDAL-----K 347
Query: 956 EPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSR-IEKLI 1014
+ + +++D GN+V+QK L + + I + + + +G ++ R I+
Sbjct: 348 DHVVELVQDLNGNHVIQKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDH-- 405
Query: 1015 ATGERRIGLSSSVS 1028
A+G +R L ++
Sbjct: 406 ASGAQRARLIEQIT 419
Score = 177 (67.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 52/208 (25%), Positives = 97/208 (46%)
Query: 668 INMEGRLSSSLLDEFKTNKTRSFELSDIV-DHVVEFSTDQYGSRFIQQKLEAATAEEKTR 726
+N G + + EF + + ++ + D + DHVVE D G+ IQ+ L TAE+
Sbjct: 318 LNQHGTRALQKMIEFISTEEQTQTVIDALKDHVVELVQDLNGNHVIQKCLNRLTAEKSQF 377
Query: 727 IFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQK 786
I+ + T+ T G V+Q+ +H + +QRA+L Q+T + L +G V+Q
Sbjct: 378 IYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQITENAFALVQDPFGNYVVQY 437
Query: 787 ALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQD-RIQFIISSFYG-QVV 844
L++ + E + K + ++VI+KC+ ++ R Q I G ++
Sbjct: 438 ILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEKCLRTADEEMRRQMIEEMLAGDELE 497
Query: 845 ALSTHPYGCRVIQRVLEHCDDANTQQII 872
+ Y V+Q +++ D A +I+
Sbjct: 498 KMLRDSYANYVVQTAMDYADPATRARIV 525
Score = 46 (21.3 bits), Expect = 4.7e-54, Sum P(3) = 4.7e-54
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 267 RAGSCNGAESLEVLHSAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEA 319
R G G S + HSA SP + R + + + S++ S G+ S+TP A
Sbjct: 10 RLGHIGG--SADESHSA--SPNVARHAARHSLESNALYSTEGNH--ESSTPTA 56
Score = 38 (18.4 bits), Expect = 4.7e-54, Sum P(3) = 4.7e-54
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 515 IGATRNLNGMVNQVAL-DFHSP---PMDPRYAQYLQRTSDYATRSAASASDPFAARNHFG 570
+GA + NG + Q +L F P + P A L Y + S PFAA ++G
Sbjct: 146 LGAATSGNGTMPQPSLAGFPQPFFYGIQPFVAPPLPVNGQY------NQSTPFAANAYYG 199
Query: 571 S 571
+
Sbjct: 200 N 200
>DICTYBASE|DDB_G0289987 [details] [associations]
symbol:DDB_G0289987 "Pumilio homology domain family
member 4" species:44689 "Dictyostelium discoideum" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50103 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 dictyBase:DDB_G0289987 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270 GO:GO:0003723
EMBL:AAFI02000150 eggNOG:COG5099 RefSeq:XP_635942.1
ProteinModelPortal:Q54GR0 EnsemblProtists:DDB0188671 GeneID:8627424
KEGG:ddi:DDB_G0289987 InParanoid:Q54GR0 OMA:IVRISMN Uniprot:Q54GR0
Length = 1036
Score = 540 (195.1 bits), Expect = 9.1e-53, Sum P(4) = 9.1e-53
Identities = 120/332 (36%), Positives = 189/332 (56%)
Query: 685 NKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFG 744
NKT + + ++ + DQ+G RF+Q+KLE + + IF E+ + LMTD FG
Sbjct: 703 NKTYT-SIDQVMGSIYPLCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFG 761
Query: 745 NYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-L 803
NY+ QK EH + QR + ++ ++R+S+ M+G R +QK +E + +Q Q++ L
Sbjct: 762 NYLCQKLLEHCNDRQRLTIIEKVGTDIVRISMNMHGTRAVQKMIEYLTTPEQIQLIKRSL 821
Query: 804 DGSVMKCVHDQNGNHVIQKCIECI-PQDRIQFIIS--SFYGQVVALSTHPYGCRVIQRVL 860
SV+ + D NGNHVIQKC+ + PQD QFI S G +A++TH +GC V+QR +
Sbjct: 822 KDSVVPLIQDLNGNHVIQKCLNKLSPQDN-QFIYDAVSSDGSCIAVATHRHGCCVLQRCI 880
Query: 861 EHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMS 920
+H ++ Q+I E++ + L QD YGNYV+Q+VL+ T + + G + ++
Sbjct: 881 DHASESQKLQLIQ-EVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILA 939
Query: 921 QQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDD 980
QKF+SNVVEKCL R LI E++ + + L +++DP+ NYV+Q L +
Sbjct: 940 TQKFSSNVVEKCLHVADAITRGYLIQEVI----DYDNLLHLLQDPYANYVIQTSLTISEP 995
Query: 981 QSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ IR HL +LK YGK I ++I K
Sbjct: 996 HQHTKLVEAIRPHLPLLKNTPYGKRIQNKIIK 1027
Score = 245 (91.3 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 65/268 (24%), Positives = 129/268 (48%)
Query: 674 LSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIP 733
L LL E ++ R + + +V S + +G+R +Q+ +E T E+ ++ +
Sbjct: 764 LCQKLL-EHCNDRQRLTIIEKVGTDIVRISMNMHGTRAVQKMIEYLTTPEQIQLIKRSLK 822
Query: 734 HART-LMTDVFGNYVIQKFFEHGT--ESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEV 790
+ L+ D+ GN+VIQK + ++Q A G + ++ +GC V+Q+ ++
Sbjct: 823 DSVVPLIQDLNGNHVIQKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCCVLQRCIDH 882
Query: 791 VHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHP 850
Q+ Q++ E+ + + V D GN+V+Q ++ Q + F G V L+T
Sbjct: 883 ASESQKLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGLATEMAKRFVGHVPILATQK 942
Query: 851 YGCRVIQRVLEHCDDANTQQIIMDEIMQH--VCNLAQDQYGNYVIQHVLEHGKPHERTTV 908
+ V+++ L H DA T+ ++ E++ + + +L QD Y NYVIQ L +PH+ T +
Sbjct: 943 FSSNVVEKCL-HVADAITRGYLIQEVIDYDNLLHLLQDPYANYVIQTSLTISEPHQHTKL 1001
Query: 909 ITQLAGQIVRMSQQKFASNVVEKCLTFG 936
+ + + + + + K + G
Sbjct: 1002 VEAIRPHLPLLKNTPYGKRIQNKIIKEG 1029
Score = 164 (62.8 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 37/168 (22%), Positives = 84/168 (50%)
Query: 700 VEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQ 759
+ +T ++G +Q+ ++ A+ +K ++ E+I ++ L+ D +GNYV+Q + +
Sbjct: 864 IAVATHRHGCCVLQRCIDHASESQKLQLIQEVIANSLVLVQDPYGNYVVQYVLDLPFQGL 923
Query: 760 RAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LD-GSVMKCVHDQNGN 817
++A + GHV L+ Q + V++K L V + ++ E +D +++ + D N
Sbjct: 924 ATEMAKRFVGHVPILATQKFSSNVVEKCLHVADAITRGYLIQEVIDYDNLLHLLQDPYAN 983
Query: 818 HVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDD 865
+VIQ + + ++ + + L PYG R+ ++++ D
Sbjct: 984 YVIQTSLTISEPHQHTKLVEAIRPHLPLLKNTPYGKRIQNKIIKEGRD 1031
Score = 155 (59.6 bits), Expect = 5.8e-10, Sum P(4) = 5.8e-10
Identities = 53/239 (22%), Positives = 100/239 (41%)
Query: 668 INMEG-RLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTR 726
+NM G R +++ T + + D VV D G+ IQ+ L + ++
Sbjct: 793 MNMHGTRAVQKMIEYLTTPEQIQLIKRSLKDSVVPLIQDLNGNHVIQKCLNKLSPQDNQF 852
Query: 727 IFPEIIPHARTLM--TDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVI 784
I+ + + T G V+Q+ +H +ESQ+ QL ++ + L L YG V+
Sbjct: 853 IYDAVSSDGSCIAVATHRHGCCVLQRCIDHASESQKLQLIQEVIANSLVLVQDPYGNYVV 912
Query: 785 QKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSF--YGQ 842
Q L++ T+M G V + ++V++KC+ ++I Y
Sbjct: 913 QYVLDLPFQGLATEMAKRFVGHVPILATQKFSSNVVEKCLHVADAITRGYLIQEVIDYDN 972
Query: 843 VVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGK 901
++ L PY VIQ L + + +++ I H+ L YG + +++ G+
Sbjct: 973 LLHLLQDPYANYVIQTSLT-ISEPHQHTKLVEAIRPHLPLLKNTPYGKRIQNKIIKEGR 1030
Score = 110 (43.8 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 907 TVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPF 966
T I Q+ G I + + + ++K L EE L + E++ + L+ +M DPF
Sbjct: 707 TSIDQVMGSIYPLCRDQHGCRFLQKKL-----EESDLQLTEIIFKEVCDYMLE-LMTDPF 760
Query: 967 GNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGER 1019
GNY+ QK+LE C+D+ I+ ++ + + +G V ++ + + T E+
Sbjct: 761 GNYLCQKLLEHCNDRQRLTIIEKVGTDIVRISMNMHGTRAVQKMIEYLTTPEQ 813
Score = 72 (30.4 bits), Expect = 9.1e-53, Sum P(4) = 9.1e-53
Identities = 38/158 (24%), Positives = 63/158 (39%)
Query: 387 NPDNQSDFLYDTSNGHNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSN 446
N N ++ +++N +N S+ + ++++N + + + N N N S N+N
Sbjct: 533 NNTNTNNNHNNSNNNNNNSVNNSNSNSNSSNNNNNNNNNNNNNNNNSNNNNSNNSNSNNN 592
Query: 447 GQVNILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNAN-ISSLDFTNVSGDYSVNQKLNSL 505
+ N ++ N + N+ S+ S Q N N S V S +L +
Sbjct: 593 NKQNNRNNNNNNNNSNNNNNNSNNNSTNSNNTQNNNNNTQSRKSLPVELQPSNIMQLTKV 652
Query: 506 VNHHFDTVGIGATRNLNGMVNQ---VALDFHSPPM-DP 539
H G G RN M NQ L SPP+ DP
Sbjct: 653 QPHSKQQQG-GRGRNNPMMQNQQQMAQLSITSPPITDP 689
Score = 65 (27.9 bits), Expect = 4.9e-52, Sum P(4) = 4.9e-52
Identities = 31/146 (21%), Positives = 56/146 (38%)
Query: 367 SLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKSTADNLAFSTHYI 426
S N H E S +++ N S +N +N S + + N + + +
Sbjct: 493 SKCNFVHDSETS--SEKVEEKQQNVSPITSTNNNNNNSSSSNNNTNTNNNHNNSNNNNNN 550
Query: 427 DFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNANISS 486
N N N+S N+N N ++ N + NS + ++ N N +S
Sbjct: 551 SVNNSNS---NSNSSNNNNNNNNNNNNNNNNSNNNNSNNSNSNNNNKQNNRNNNNNNNNS 607
Query: 487 LDFTNVSGDYSVNQKLNSLVNHHFDT 512
+ N S + S N N+ N++ +T
Sbjct: 608 NNNNNNSNNNSTNS--NNTQNNNNNT 631
Score = 64 (27.6 bits), Expect = 6.2e-52, Sum P(4) = 6.2e-52
Identities = 38/159 (23%), Positives = 64/159 (40%)
Query: 380 VQSQL---QLNPDNQSDFLYDTSNGHNQSMKQQFMD--KSTADNLAFSTHYIDFTRKNGI 434
VQS+L ++N D++ +S S QF D +S +++L ST +
Sbjct: 285 VQSELYSLKMNDGKPDDYIVKSSFDVAFSTVNQFFDEPRSNSNSLPRSTSNSSLNQI--F 342
Query: 435 VPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSS---RSVGRQQNANISS-LD-- 488
P L S INSN N ++ S G G+ R + + N + S +D
Sbjct: 343 EPQLRNSNINSNNNNNNSNNNNNKQPPQPPQSNGVSGNGAIVRPIAKVGNNLLHSPIDLN 402
Query: 489 -FTNVSGDYSVNQKLNSLVNHHFDTVGIGATRNLNGMVN 526
F+N +G+ + N+ N++ + N N N
Sbjct: 403 QFSNFNGNMNGTTSNNNNNNNNNNNNNNNNNNNSNNNSN 441
Score = 59 (25.8 bits), Expect = 9.1e-53, Sum P(4) = 9.1e-53
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 105 DEIRSHPAYLSYYYSHENINPRLPPPL 131
++IR+ Y +Y +H N +LPPPL
Sbjct: 49 NDIRADEQYYEFYINHVN-QDKLPPPL 74
Score = 51 (23.0 bits), Expect = 6.1e-52, Sum P(5) = 6.1e-52
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 417 DNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSSRSV 476
+NL S ID + + N+N + N+N N ++ N + N++ G+ S
Sbjct: 392 NNLLHSP--IDLNQFSNFNGNMNGTTSNNNNNNNNNNNNNNNNNNNSNNNSNNNGNGNSN 449
Query: 477 GRQQNAN 483
N N
Sbjct: 450 SNSSNNN 456
Score = 50 (22.7 bits), Expect = 6.1e-52, Sum P(5) = 6.1e-52
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 379 HVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKSTADN 418
++Q Q Q N N ++ ++S+ H+Q +QQ + +N
Sbjct: 244 YLQQQQQFNNSNNNN---NSSHHHHQQQQQQQQQQQNGNN 280
Score = 42 (19.8 bits), Expect = 5.2e-51, Sum P(5) = 5.2e-51
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 472 SSRSVGRQQNANISSLDFTNVSGDYSVNQKLNSLVNHHFDTVGIGATRNLNGMVN 526
SS V +Q N+S + TN + + S + N+ N++ + + N N VN
Sbjct: 504 SSEKVEEKQQ-NVSPITSTNNNNNNSSSSNNNTNTNNNHNN----SNNNNNNSVN 553
Score = 40 (19.1 bits), Expect = 9.1e-53, Sum P(4) = 9.1e-53
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 39 QRQPDRQIVNRERDVNIYRSGSAPPTVEGSLNAVGSLF 76
+ + D ++N + RS SAPP++ LN+ SLF
Sbjct: 5 EEEDDEFLINNTQFKPPDRSTSAPPSLT-RLNS-NSLF 40
Score = 40 (19.1 bits), Expect = 8.3e-51, Sum P(5) = 8.3e-51
Identities = 17/72 (23%), Positives = 31/72 (43%)
Query: 430 RKNGIVPNLNASAINSNGQV--NILKRTSSPNLYSKMNSTGFGGSSRSVGRQQNANISSL 487
+ NG+ + N + + +V N+L N +S N G +S + N N ++
Sbjct: 373 QSNGV--SGNGAIVRPIAKVGNNLLHSPIDLNQFSNFNGNMNGTTSNNNNNNNNNNNNNN 430
Query: 488 DFTNVSGDYSVN 499
+ N S + S N
Sbjct: 431 NNNNNSNNNSNN 442
>POMBASE|SPAC6G9.14 [details] [associations]
symbol:SPAC6G9.14 "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 PomBase:SPAC6G9.14 GO:GO:0005829 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003729
GO:GO:0000288 eggNOG:COG5099 OrthoDB:EOG42NN7Z PIR:T39076
RefSeq:NP_594123.1 ProteinModelPortal:Q92359
EnsemblFungi:SPAC6G9.14.1 GeneID:2542056 KEGG:spo:SPAC6G9.14
NextBio:20803131 Uniprot:Q92359
Length = 681
Score = 535 (193.4 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 117/349 (33%), Positives = 193/349 (55%)
Query: 667 GINMEGRLSSS-LLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKT 725
G N+ +S + ++ S L + +++ F DQ+G R++Q+ LE
Sbjct: 317 GFNVPSLISDDPSVSSSLSSSVASLSLQN--SNILSFCKDQHGCRYLQRLLEKKNQSHID 374
Query: 726 RIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQ 785
+F E P+ LM D FGNY+ QK FEH +E+QR+ + ++ +S M+G R +Q
Sbjct: 375 AVFAETHPYLAVLMVDAFGNYLCQKLFEHASEAQRSTFIQIIAPKLVPISFNMHGTRALQ 434
Query: 786 KALEVVHV-DQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVV 844
K +++V DQ + +V L +V+ D NGNHVIQKC+ Q+ QFI + +
Sbjct: 435 KIIDLVSSPDQISCIVNALRPNVVLLTKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPL 494
Query: 845 ALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHE 904
+STH +GC V+QR +H A +Q++ + I+ H L QD +GNYV+Q+VLE P+
Sbjct: 495 DVSTHRHGCCVVQRCFDHASPAQIEQLV-EHIVPHALTLVQDAFGNYVLQYVLELNNPNH 553
Query: 905 RTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKD 964
+I+ ++ +S QKF+SNV+EKC+ F ++ LI+E++ DE L +++D
Sbjct: 554 TEAIISYFLYKVRALSTQKFSSNVMEKCIFFAPAAIKEKLISELM---DEKH-LPKLLRD 609
Query: 965 PFGNYVVQKVLETCD-DQSLELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
F NYV+Q L+ Q EL+ RI+ + +K G+ I+S++E+
Sbjct: 610 SFANYVIQTALDNASVKQRAELV-ERIKPLIPSIKNTPCGRRILSKLER 657
Score = 138 (53.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 39/211 (18%), Positives = 95/211 (45%)
Query: 804 DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHC 863
+ +++ DQ+G +Q+ +E Q I + + + + L +G + Q++ EH
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 864 DDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH-GKPHERTTVITQLAGQIVRMSQQ 922
+A I I + ++ + +G +Q +++ P + + ++ L +V +++
Sbjct: 405 SEAQRSTFIQI-IAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKD 463
Query: 923 KFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQS 982
++V++KCL S E+ Q + + + +PL + G VVQ+ +
Sbjct: 464 LNGNHVIQKCLNKFSQEDCQFIFDAIC-----EDPLD-VSTHRHGCCVVQRCFDHASPAQ 517
Query: 983 LELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
+E ++ I H L + +G +++ + +L
Sbjct: 518 IEQLVEHIVPHALTLVQDAFGNYVLQYVLEL 548
Score = 44 (20.5 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 102 LSEDEIRSHPAYLSYYYS 119
++E +SHP+++S YS
Sbjct: 1 MTEQSSKSHPSFMSTEYS 18
>UNIPROTKB|H0YC97 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 Ensembl:ENST00000529846 Bgee:H0YC97 Uniprot:H0YC97
Length = 227
Score = 535 (193.4 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 113/217 (52%), Positives = 145/217 (66%)
Query: 698 HVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTE 757
H++EFS DQ+GSRFIQ KLE AT E+ +F EI+ A LM DVFGNYVIQKFFE G+
Sbjct: 3 HIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSL 62
Query: 758 SQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQT--QMVAELDGSVMKCVHDQN 815
Q+ LA ++ GHVL L+LQMYGCRVIQKALE + DQQ +MV ELDG V+KCV DQN
Sbjct: 63 EQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQN 122
Query: 816 GNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDE 875
GNHV+QKCIEC+ +QFII +F GQ YG VIQ VLEH + +I+ E
Sbjct: 123 GNHVVQKCIECVQPQSLQFIIDAFKGQ------DQYGNYVIQHVLEHGRPEDKSKIVA-E 175
Query: 876 IMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQL 912
I +V L+Q ++ + V++ + H ER +I ++
Sbjct: 176 IRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV 212
Score = 332 (121.9 bits), Expect = 8.1e-29, P = 8.1e-29
Identities = 79/232 (34%), Positives = 122/232 (52%)
Query: 734 HARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHV 793
H D G+ IQ E T ++R + +++ +L + ++G VIQK E +
Sbjct: 3 HIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSL 62
Query: 794 DQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDR--IQFIISSFYGQVVALSTHPY 851
+Q+ + + G V+ G VIQK +E IP D+ I ++ G V+
Sbjct: 63 EQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQN 122
Query: 852 GCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQ 911
G V+Q+ +E C + Q I+D QDQYGNYVIQHVLEHG+P +++ ++ +
Sbjct: 123 GNHVVQKCIE-CVQPQSLQFIIDAFK------GQDQYGNYVIQHVLEHGRPEDKSKIVAE 175
Query: 912 LAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMM 962
+ G ++ +SQ KFASNVVEKC+T S ER +LI+E+ D + L MM
Sbjct: 176 IRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMM 227
Score = 202 (76.2 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 53/186 (28%), Positives = 93/186 (50%)
Query: 769 GHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIP 828
GH++ S +G R IQ LE ++ + E+ + + + D GN+VIQK E
Sbjct: 2 GHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGS 61
Query: 829 QDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQ---HVCNLAQ 885
++ + G V++L+ YGCRVIQ+ LE + QQ+I + + + HV +
Sbjct: 62 LEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIP--SDQQVINEMVRELDGHVLKCVK 119
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
DQ GN+V+Q +E +P +I GQ ++ + V++ L G PE++ ++
Sbjct: 120 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQ------DQYGNYVIQHVLEHGRPEDKSKIV 173
Query: 946 NEMLGS 951
E+ G+
Sbjct: 174 AEIRGN 179
Score = 193 (73.0 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 55/199 (27%), Positives = 95/199 (47%)
Query: 681 EFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMT 740
E T R ++I+ + D +G+ IQ+ E + E+K + I H +L
Sbjct: 22 ERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLAL 81
Query: 741 DVFGNYVIQKFFEHGTESQRA--QLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQ 798
++G VIQK E Q+ ++ +L GHVL+ G V+QK +E V Q Q
Sbjct: 82 QMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQ-PQSLQ 140
Query: 799 MVAELDGSVMKCVHDQNGNHVIQKCIEC-IPQDRIQFIISSFYGQVVALSTHPYGCRVIQ 857
+ + K DQ GN+VIQ +E P+D+ + I++ G V+ LS H + V++
Sbjct: 141 FIID----AFKG-QDQYGNYVIQHVLEHGRPEDKSK-IVAEIRGNVLVLSQHKFASNVVE 194
Query: 858 RVLEHCDDANTQQIIMDEI 876
+ + H + +++DE+
Sbjct: 195 KCVTHASRTE-RAVLIDEV 212
Score = 185 (70.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 57/221 (25%), Positives = 104/221 (47%)
Query: 805 GSVMKCVHDQNGNHVIQKCIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHC 863
G +M+ DQ+G+ IQ +E P +R Q + + L +G VIQ+ E
Sbjct: 2 GHIMEFSQDQHGSRFIQLKLERATPAER-QLVFNEILQAAYQLMVDVFGNYVIQKFFEF- 59
Query: 864 DDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTV---ITQLAGQIVRMS 920
+ + + I HV +LA YG VIQ LE P ++ + + +L G +++
Sbjct: 60 GSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQQVINEMVRELDGHVLKCV 118
Query: 921 QQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDD 980
+ + ++VV+KC+ P+ Q +I+ G +D +GNYV+Q VLE
Sbjct: 119 KDQNGNHVVQKCIECVQPQSLQFIIDAFKG------------QDQYGNYVIQHVLEHGRP 166
Query: 981 QSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRI 1021
+ I++ IR ++ VL ++ + ++V + + ER +
Sbjct: 167 EDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAV 207
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/110 (33%), Positives = 57/110 (51%)
Query: 913 AGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQ 972
AG I+ SQ + S ++ L +P ERQL+ NE+L + + +M D FGNYV+Q
Sbjct: 1 AGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQ------LMVDVFGNYVIQ 54
Query: 973 KVLETCD-DQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRI 1021
K E +Q L L RIR H+ L YG ++ + + I + ++ I
Sbjct: 55 KFFEFGSLEQKLALA-ERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVI 103
>GENEDB_PFALCIPARUM|PFD0825c [details] [associations]
symbol:PFD0825c "RNA-binding protein of
pumilio/mpt5 family, putative" species:5833 "Plasmodium falciparum"
[GO:0017148 "negative regulation of translation" evidence=ISS]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0017148 GO:GO:0003723 EMBL:AL844503
HOGENOM:HOG000225260 RefSeq:XP_001351478.1
ProteinModelPortal:Q8I1R7 EnsemblProtists:PFD0825c:mRNA
GeneID:812518 KEGG:pfa:PFD0825c EuPathDB:PlasmoDB:PF3D7_0417100
OMA:IDHINDI ProtClustDB:CLSZ2500510 Uniprot:Q8I1R7
Length = 514
Score = 482 (174.7 bits), Expect = 9.3e-47, Sum P(2) = 9.3e-47
Identities = 108/339 (31%), Positives = 188/339 (55%)
Query: 680 DEFKTNKTRS--FELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHART 737
DE K N+ ++S ++ + + G +I +KL+ EEK I ++ +
Sbjct: 178 DEEKHNEEGQVHIDMSKVMYDIYFLCFHKNGCEYIIKKLKEDNKEEKEIILNSLLIDTMS 237
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQT 797
L D++G+YV Q F+ E + + + H L+L YGCR+IQK+LE + + +
Sbjct: 238 LCPDIYGSYVAQSIFDLKDEKYKERFTDEFLKHTSFLTLHTYGCRLIQKSLESLSDEYKC 297
Query: 798 QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQ 857
++ EL ++K + QNGNHVIQKC+E +P I II+ + LS+H YGCR++Q
Sbjct: 298 KIFKELQEDLIKYICHQNGNHVIQKCVEVLPCSYIDIIINIIEEYLPFLSSHAYGCRIVQ 357
Query: 858 RVLEHCDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
R+ E N QQI + ++I++ + +L +++YGNYVIQ EH + R + ++
Sbjct: 358 RIYEI---GNEQQINRLNEQIIKKI-HLIKNRYGNYVIQKCFEHSDDNIRFIITDEIVND 413
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGS-TDENEPLQAMMKDPFGNYVVQKV 974
I ++S K+A N++EK L + ++ +I +++ +D + + + KD +GN+++QK+
Sbjct: 414 IYKLSSHKYACNIIEKILLKKEYKYKKKIIKKIVNDISDGKDNIINICKDCYGNFMMQKL 473
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
L TC + I+ I +L+ LK TYGK+I+ I L
Sbjct: 474 LTTCRKKERNFIIKTIIENLDKLKDETYGKYILRAINNL 512
Score = 168 (64.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 66/289 (22%), Positives = 128/289 (44%)
Query: 753 EHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVH 812
+H E Q S++ + L GC I K L+ + +++ ++ L M
Sbjct: 181 KHNEEGQVHIDMSKVMYDIYFLCFHKNGCEYIIKKLKEDNKEEKEIILNSLLIDTMSLCP 240
Query: 813 DQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQI- 871
D G++V Q + + + F L+ H YGCR+IQ+ LE D +I
Sbjct: 241 DIYGSYVAQSIFDLKDEKYKERFTDEFLKHTSFLTLHTYGCRLIQKSLESLSDEYKCKIF 300
Query: 872 --IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVR-MSQQKFASNV 928
+ +++++++C+ Q GN+VIQ +E P +I + + + +S + +
Sbjct: 301 KELQEDLIKYICH----QNGNHVIQKCVEV-LPCSYIDIIINIIEEYLPFLSSHAYGCRI 355
Query: 929 VEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQ-----SL 983
V++ G+ ++ L +++ ++K+ +GNYV+QK E DD +
Sbjct: 356 VQRIYEIGNEQQINRLNEQIIKKIH-------LIKNRYGNYVIQKCFEHSDDNIRFIITD 408
Query: 984 ELI-----LSRIRVHLNVLKK------YTYGKHIVSRIEKLIATGERRI 1021
E++ LS + N+++K Y Y K I+ +I I+ G+ I
Sbjct: 409 EIVNDIYKLSSHKYACNIIEKILLKKEYKYKKKIIKKIVNDISDGKDNI 457
Score = 44 (20.5 bits), Expect = 9.3e-47, Sum P(2) = 9.3e-47
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 2 LPGSNIEMLPNLEDGLRGQNGNLSLED 28
+P SNIEML + E L G L L D
Sbjct: 67 MPSSNIEMLFDQE--LMGNQNILFLND 91
>UNIPROTKB|Q8I1R7 [details] [associations]
symbol:PFD0825c "RNA-binding protein of pumilio/mpt5
family, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0017148 "negative regulation of translation" evidence=ISS]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0017148 GO:GO:0003723 EMBL:AL844503
HOGENOM:HOG000225260 RefSeq:XP_001351478.1
ProteinModelPortal:Q8I1R7 EnsemblProtists:PFD0825c:mRNA
GeneID:812518 KEGG:pfa:PFD0825c EuPathDB:PlasmoDB:PF3D7_0417100
OMA:IDHINDI ProtClustDB:CLSZ2500510 Uniprot:Q8I1R7
Length = 514
Score = 482 (174.7 bits), Expect = 9.3e-47, Sum P(2) = 9.3e-47
Identities = 108/339 (31%), Positives = 188/339 (55%)
Query: 680 DEFKTNKTRS--FELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHART 737
DE K N+ ++S ++ + + G +I +KL+ EEK I ++ +
Sbjct: 178 DEEKHNEEGQVHIDMSKVMYDIYFLCFHKNGCEYIIKKLKEDNKEEKEIILNSLLIDTMS 237
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQT 797
L D++G+YV Q F+ E + + + H L+L YGCR+IQK+LE + + +
Sbjct: 238 LCPDIYGSYVAQSIFDLKDEKYKERFTDEFLKHTSFLTLHTYGCRLIQKSLESLSDEYKC 297
Query: 798 QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQ 857
++ EL ++K + QNGNHVIQKC+E +P I II+ + LS+H YGCR++Q
Sbjct: 298 KIFKELQEDLIKYICHQNGNHVIQKCVEVLPCSYIDIIINIIEEYLPFLSSHAYGCRIVQ 357
Query: 858 RVLEHCDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
R+ E N QQI + ++I++ + +L +++YGNYVIQ EH + R + ++
Sbjct: 358 RIYEI---GNEQQINRLNEQIIKKI-HLIKNRYGNYVIQKCFEHSDDNIRFIITDEIVND 413
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGS-TDENEPLQAMMKDPFGNYVVQKV 974
I ++S K+A N++EK L + ++ +I +++ +D + + + KD +GN+++QK+
Sbjct: 414 IYKLSSHKYACNIIEKILLKKEYKYKKKIIKKIVNDISDGKDNIINICKDCYGNFMMQKL 473
Query: 975 LETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
L TC + I+ I +L+ LK TYGK+I+ I L
Sbjct: 474 LTTCRKKERNFIIKTIIENLDKLKDETYGKYILRAINNL 512
Score = 168 (64.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 66/289 (22%), Positives = 128/289 (44%)
Query: 753 EHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVH 812
+H E Q S++ + L GC I K L+ + +++ ++ L M
Sbjct: 181 KHNEEGQVHIDMSKVMYDIYFLCFHKNGCEYIIKKLKEDNKEEKEIILNSLLIDTMSLCP 240
Query: 813 DQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQI- 871
D G++V Q + + + F L+ H YGCR+IQ+ LE D +I
Sbjct: 241 DIYGSYVAQSIFDLKDEKYKERFTDEFLKHTSFLTLHTYGCRLIQKSLESLSDEYKCKIF 300
Query: 872 --IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVR-MSQQKFASNV 928
+ +++++++C+ Q GN+VIQ +E P +I + + + +S + +
Sbjct: 301 KELQEDLIKYICH----QNGNHVIQKCVEV-LPCSYIDIIINIIEEYLPFLSSHAYGCRI 355
Query: 929 VEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQ-----SL 983
V++ G+ ++ L +++ ++K+ +GNYV+QK E DD +
Sbjct: 356 VQRIYEIGNEQQINRLNEQIIKKIH-------LIKNRYGNYVIQKCFEHSDDNIRFIITD 408
Query: 984 ELI-----LSRIRVHLNVLKK------YTYGKHIVSRIEKLIATGERRI 1021
E++ LS + N+++K Y Y K I+ +I I+ G+ I
Sbjct: 409 EIVNDIYKLSSHKYACNIIEKILLKKEYKYKKKIIKKIVNDISDGKDNI 457
Score = 44 (20.5 bits), Expect = 9.3e-47, Sum P(2) = 9.3e-47
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 2 LPGSNIEMLPNLEDGLRGQNGNLSLED 28
+P SNIEML + E L G L L D
Sbjct: 67 MPSSNIEMLFDQE--LMGNQNILFLND 91
>TAIR|locus:2015036 [details] [associations]
symbol:PUM8 "pumilio 8" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0009507
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AC073942 eggNOG:COG5099 HSSP:Q14671
HOGENOM:HOG000176806 IPI:IPI00535613 PIR:B86355 RefSeq:NP_173643.1
UniGene:At.51720 ProteinModelPortal:Q9LM20 SMR:Q9LM20 PRIDE:Q9LM20
EnsemblPlants:AT1G22240.1 GeneID:838829 KEGG:ath:AT1G22240
TAIR:At1g22240 InParanoid:Q9LM20 OMA:FCIDIAT PhylomeDB:Q9LM20
ProtClustDB:CLSN2914398 Genevestigator:Q9LM20 Uniprot:Q9LM20
Length = 515
Score = 491 (177.9 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 110/331 (33%), Positives = 181/331 (54%)
Query: 684 TNKTRSF-ELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDV 742
+N S ++S+ +V + DQ+G RF+Q E +A + IF E+IPH LM D
Sbjct: 187 SNPNESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDP 246
Query: 743 FGNYVIQKFFEHGTESQRAQLASQLT---GHVLRLSLQMYGCRVIQKALEVVHVDQQTQM 799
FGNY++QK + E QR Q+ +T G ++R+SL YG RV+Q+ +E + +Q +
Sbjct: 247 FGNYLMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISL 306
Query: 800 V-AELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQR 858
V + L + + D NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+
Sbjct: 307 VKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQK 366
Query: 859 VLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVR 918
+ + ++++ EI ++ LAQD YGNY +Q VLE ++ QL G V
Sbjct: 367 CIAYSSGLQREKLVT-EISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVE 425
Query: 919 MSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETC 978
+S QKF+S++VE+CLT PE R ++ E++ +++DP+ N+V+Q L
Sbjct: 426 LSMQKFSSHMVERCLTH-CPESRPQIVRELISVPH----FDILIQDPYANFVIQAALAVT 480
Query: 979 DDQSLELILSRIRVHLNVLKKYTYGKHIVSR 1009
++ IR H ++L+ Y K I SR
Sbjct: 481 KGSLHATLVEVIRPH-SILRNNPYCKRIFSR 510
Score = 151 (58.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 50/197 (25%), Positives = 90/197 (45%)
Query: 668 INMEG-RLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTR 726
+N G R+ L++ KT K S S + + D G+ IQ+ L+ + E+
Sbjct: 283 LNAYGTRVVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEF 342
Query: 727 IFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQK 786
IF + + T G V+QK + + QR +L ++++ + L L+ YG +Q
Sbjct: 343 IFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQF 402
Query: 787 ALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFI---ISSFYGQV 843
LE+ M+A+L G ++ + +H++++C+ P+ R Q + IS + +
Sbjct: 403 VLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDI 462
Query: 844 VALSTHPYGCRVIQRVL 860
L PY VIQ L
Sbjct: 463 --LIQDPYANFVIQAAL 477
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 34/146 (23%), Positives = 74/146 (50%)
Query: 873 MDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKC 932
+ E +V +A+DQ+G +Q + E G + + +++ +V + F + +++K
Sbjct: 196 VSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKL 255
Query: 933 LTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQS-LELILSRIR 991
L + E+R +I L T E L + + +G VVQ+++E+ + + L+ S +R
Sbjct: 256 LDVCNEEQRTQII---LMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALR 312
Query: 992 V-HLNVLKKYTYGKHIVSRIEKLIAT 1016
LN+++ G H++ R + ++T
Sbjct: 313 PGFLNLIRDLN-GNHVIQRCLQCLST 337
>TAIR|locus:2194699 [details] [associations]
symbol:PUM7 "pumilio 7" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0003729 "mRNA binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0009507 GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003729
EMBL:AC012680 eggNOG:COG5099 HSSP:Q14671 IPI:IPI00517199 PIR:H96810
RefSeq:NP_177940.2 UniGene:At.52554 ProteinModelPortal:Q9C9R6
SMR:Q9C9R6 EnsemblPlants:AT1G78160.1 GeneID:844152
KEGG:ath:AT1G78160 TAIR:At1g78160 HOGENOM:HOG000176806
InParanoid:Q9C9R6 OMA:REYSAYS PhylomeDB:Q9C9R6
Genevestigator:Q9C9R6 Uniprot:Q9C9R6
Length = 650
Score = 482 (174.7 bits), Expect = 6.5e-45, P = 6.5e-45
Identities = 109/322 (33%), Positives = 180/322 (55%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKF 751
+ DI +V + DQ+G RF+Q+ + T+ + IF E+I H LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 752 FEHGTESQRAQL---ASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVA-ELDGSV 807
+ TE QR Q+ A++ G ++R+SL YG RV+Q+ +E + +Q +V L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 808 MKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDAN 867
+ + D NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+ + +
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQ 510
Query: 868 TQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASN 927
+++I EI ++ LAQD +GNY +Q V+E P ++ QL G V++S QKF+S+
Sbjct: 511 REKLIA-EISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 928 VVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELIL 987
+VE+CL PE R ++ E++ ++ LQ DP+ N+V+Q L ++
Sbjct: 570 MVERCLMH-CPESRPQIVRELVSVPHFDQLLQ----DPYANFVIQAALAATKGPLHASLV 624
Query: 988 SRIRVHLNVLKKYTYGKHIVSR 1009
IR H ++L+ Y K I SR
Sbjct: 625 EVIRPH-SILRNNPYCKRIFSR 645
Score = 205 (77.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 57/239 (23%), Positives = 114/239 (47%)
Query: 699 VVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEII-PHARTLMTDVFGNYVIQKFFEHGTE 757
++ S + YG+R +Q+ +E + ++ + + P L+ D+ GN+VIQ+ + +
Sbjct: 413 LIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRCLQCLST 472
Query: 758 SQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGN 817
+ T ++ +GC V+QK + Q+ +++AE+ + + D GN
Sbjct: 473 EDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPFGN 532
Query: 818 HVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEI- 876
+ +Q IE + +++ G V LS + +++R L HC ++ Q I+ + +
Sbjct: 533 YAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQ-IVRELVS 591
Query: 877 MQHVCNLAQDQYGNYVIQHVLEHGK-PHERTTVITQLAGQIVRMS---QQKFASNVVEK 931
+ H L QD Y N+VIQ L K P + V I+R + ++ F+ N+++K
Sbjct: 592 VPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPHSILRNNPYCKRIFSRNLLKK 650
Score = 129 (50.5 bits), Expect = 0.00019, P = 0.00019
Identities = 43/195 (22%), Positives = 84/195 (43%)
Query: 668 INMEG-RLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTR 726
+N G R+ L++ ++ K S + ++ D G+ IQ+ L+ + E+
Sbjct: 418 LNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRCLQCLSTEDNKF 477
Query: 727 IFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQK 786
IF + T G V+QK + QR +L ++++ + L L+ +G +Q
Sbjct: 478 IFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPFGNYAVQF 537
Query: 787 ALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSF-YGQVVA 845
+E+ M+A+L G ++ + +H++++C+ P+ R Q +
Sbjct: 538 VIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQ 597
Query: 846 LSTHPYGCRVIQRVL 860
L PY VIQ L
Sbjct: 598 LLQDPYANFVIQAAL 612
>TAIR|locus:2167111 [details] [associations]
symbol:PUM12 "pumilio 12" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AB019234 eggNOG:COG5099 HSSP:Q14671 IPI:IPI00534318
RefSeq:NP_200462.2 UniGene:At.55587 ProteinModelPortal:Q9LVC3
SMR:Q9LVC3 STRING:Q9LVC3 EnsemblPlants:AT5G56510.1 GeneID:835752
KEGG:ath:AT5G56510 TAIR:At5g56510 HOGENOM:HOG000176955
InParanoid:Q9LVC3 OMA:NDIEMIF PhylomeDB:Q9LVC3
Genevestigator:Q9LVC3 Uniprot:Q9LVC3
Length = 596
Score = 449 (163.1 bits), Expect = 9.1e-43, Sum P(2) = 9.1e-43
Identities = 98/310 (31%), Positives = 168/310 (54%)
Query: 705 DQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLA 764
DQ+G RF+Q+ + IF EII + LM D FGNY++QK E E QR Q+
Sbjct: 288 DQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIV 347
Query: 765 SQLT---GHVLRLSLQMYGCRVIQKALEVVHVDQQTQMV-AELDGSVMKCVHDQNGNHVI 820
+T G ++++S M+G R +QK +E +++ ++ + L ++ + + NGNHV+
Sbjct: 348 HSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVV 407
Query: 821 QKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHV 880
Q+C++ + +F+ + V L+T +GC V+Q+ L + + Q ++ EI +
Sbjct: 408 QRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLV-SEIASNA 466
Query: 881 CNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEE 940
L+QD +GNYV+Q+V E ++ QL G +S QK +SNVVEKCL +
Sbjct: 467 LLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKH 526
Query: 941 RQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKY 1000
R +I E++ L +M DP+GNYV+Q L+ L++ I+++++ L+
Sbjct: 527 RARIIRELINYGR----LDQVMLDPYGNYVIQAALKQSKGNVHALLVDAIKLNISSLRTN 582
Query: 1001 TYGKHIVSRI 1010
YGK ++S +
Sbjct: 583 PYGKKVLSAL 592
Score = 217 (81.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 60/260 (23%), Positives = 123/260 (47%)
Query: 757 ESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNG 816
+ Q+ ++ G + L+ +GCR +Q+ + + E+ + + + D G
Sbjct: 268 QPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFG 327
Query: 817 NHVIQKCIE-CIPQDRIQFI--ISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIM 873
N+++QK +E C R+Q + I+ G ++ +S +G R +Q+++E II+
Sbjct: 328 NYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIII 387
Query: 874 DEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCL 933
+ + +L ++ GN+V+Q L++ P+ + V ++ + V++KCL
Sbjct: 388 SALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCL 447
Query: 934 TFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVH 993
+ E++Q L++E+ N L + +DPFGNYV+Q V E + IL ++ +
Sbjct: 448 GYSEGEQKQHLVSEIAS----NALL--LSQDPFGNYVLQYVFELQLQWATFEILEQLEGN 501
Query: 994 LNVLKKYTYGKHIVSRIEKL 1013
L ++V + KL
Sbjct: 502 YTELSMQKCSSNVVEKCLKL 521
Score = 195 (73.7 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 47/163 (28%), Positives = 86/163 (52%)
Query: 696 VDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHG 755
+ H VE +TD++G +Q+ L + E+K + EI +A L D FGNYV+Q FE
Sbjct: 427 ITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQ 486
Query: 756 TESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELD--GSVMKCVHD 813
+ ++ QL G+ LS+Q V++K L++ + +++ EL G + + + D
Sbjct: 487 LQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLD 546
Query: 814 QNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVI 856
GN+VIQ ++ + ++ + + +L T+PYG +V+
Sbjct: 547 PYGNYVIQAALKQSKGNVHALLVDAIKLNISSLRTNPYGKKVL 589
Score = 195 (73.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 63/276 (22%), Positives = 130/276 (47%)
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQT 797
L D G +Q+ F + + +++ ++ L + +G ++QK LEV + DQ+
Sbjct: 285 LAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRM 344
Query: 798 QMVAELD---GSVMKCVHDQNGNHVIQKCIECIP-QDRIQFIISSFYGQVVALSTHPYGC 853
Q+V + G ++K D +G +QK +E ++ I IIS+ +V L + G
Sbjct: 345 QIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGN 404
Query: 854 RVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA 913
V+QR L++ + + + + H LA D++G V+Q L + + ++ +++++A
Sbjct: 405 HVVQRCLQYLLPY-CGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIA 463
Query: 914 GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQK 973
+ +SQ F + V++ + Q E+L + N +M K + VV+K
Sbjct: 464 SNALLLSQDPFGNYVLQYVFEL----QLQWATFEILEQLEGNYTELSMQK--CSSNVVEK 517
Query: 974 VLETCDDQSLELILSRIRVH--LNVLKKYTYGKHIV 1007
L+ DD+ I+ + + L+ + YG +++
Sbjct: 518 CLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVI 553
Score = 164 (62.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 56/263 (21%), Positives = 122/263 (46%)
Query: 693 SDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMT---DVFGNYVIQ 749
++I+D++ E D +G+ +Q+ LE +++ +I I L+ D+ G +Q
Sbjct: 312 NEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQ 371
Query: 750 KFFEHGT-ESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVM 808
K E E + + + S L ++ L + G V+Q+ L+ + + + + E ++
Sbjct: 372 KIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYL-LPYCGKFLFE--AAIT 428
Query: 809 KCVH---DQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDD 865
CV D++G V+QKC+ ++ Q ++S + LS P+G V+Q V E
Sbjct: 429 HCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQ 488
Query: 866 ANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLA--GQIVRMSQQK 923
T +I+ +++ + L+ + + V++ L+ R +I +L G++ ++
Sbjct: 489 WATFEIL-EQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDP 547
Query: 924 FASNVVEKCLTFGSPEERQLLIN 946
+ + V++ L LL++
Sbjct: 548 YGNYVIQAALKQSKGNVHALLVD 570
Score = 48 (22.0 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 271 CNGAESLEVLHSAAASPGLV 290
CN + ++++HS PGL+
Sbjct: 338 CNEDQRMQIVHSITRKPGLL 357
Score = 40 (19.1 bits), Expect = 9.1e-43, Sum P(2) = 9.1e-43
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 16 GLRGQNGNLSLEDSLQTELELILQR---QPDR 44
G QNG L L++ L +L + L QP +
Sbjct: 240 GDESQNGRLWLQNQLNEDLTMSLNNLSLQPQK 271
>POMBASE|SPAC4G8.03c [details] [associations]
symbol:SPAC4G8.03c "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 PomBase:SPAC4G8.03c GO:GO:0005794 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003729
GO:GO:0000288 eggNOG:COG5099 PIR:T38847 RefSeq:NP_593062.1
ProteinModelPortal:Q09829 EnsemblFungi:SPAC4G8.03c.1 GeneID:2543684
KEGG:spo:SPAC4G8.03c OrthoDB:EOG4QJVZ9 NextBio:20804690
Uniprot:Q09829
Length = 780
Score = 443 (161.0 bits), Expect = 7.4e-42, Sum P(2) = 7.4e-42
Identities = 99/341 (29%), Positives = 189/341 (55%)
Query: 676 SSLLDEFKTNKTRSFELSDIVDHVVEFST---DQYGSRFIQQKLEAATAEEKTRIFPEII 732
S+LL K++ ++ +V + ST DQYG R++Q+ L+ + FPEI
Sbjct: 441 SNLLKNKGKKKSQDNQIPHLVGFLGHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIR 500
Query: 733 PHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH 792
LM D FGNY+ QK F + + Q+ + + + ++ + +YG R +Q ++ +
Sbjct: 501 QSVVQLMIDPFGNYMCQKLFVYASREQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLT 560
Query: 793 VDQQTQMVAELD-GSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPY 851
++Q ++ ++ S+ D NG HV+QKCI P ++++ + S ++ L+T+ +
Sbjct: 561 SNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRH 620
Query: 852 GCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHG-KPH-ERTTVI 909
GC ++QR L+ + + Q+ +++ I++ L Q+ YGNY++QHVLE +P+ ER +I
Sbjct: 621 GCCILQRCLDRTN-GDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTER--II 677
Query: 910 TQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNY 969
+ G I ++S QKF+SN +E+C+ SP R+ ++ E L + ++ ++ D + NY
Sbjct: 678 EKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFLSFPN----IEQLLDDCYANY 733
Query: 970 VVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRI 1010
V+Q+ L D+ LIL I + ++ +G+HI++++
Sbjct: 734 VMQRFLNVADESQKFLILRSISHVIPKIQNTRHGRHILAKL 774
Score = 134 (52.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 50/236 (21%), Positives = 109/236 (46%)
Query: 664 LDAGINMEG-RLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAE 722
+D N+ G R +++D+ +N+ S L I+ + + D G+ +Q+ + E
Sbjct: 540 VDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPE 599
Query: 723 EKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCR 782
+ +F + + TL T+ G ++Q+ + + +L + + L L YG
Sbjct: 600 KLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYGNY 659
Query: 783 VIQKALEVVHVDQQTQMVAE-LDGSVMKCVHDQNGNHVIQKCIECI-PQDRIQFIISSF- 839
++Q LE+ ++ T+ + E G++ K + ++ I++CI P R Q ++ F
Sbjct: 660 LVQHVLEL-NIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQ-MLQEFL 717
Query: 840 -YGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQD-QYGNYVI 893
+ + L Y V+QR L D++ Q+ ++ + HV Q+ ++G +++
Sbjct: 718 SFPNIEQLLDDCYANYVMQRFLNVADES--QKFLILRSISHVIPKIQNTRHGRHIL 771
Score = 80 (33.2 bits), Expect = 7.4e-42, Sum P(2) = 7.4e-42
Identities = 44/157 (28%), Positives = 64/157 (40%)
Query: 367 SLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTS-NGHNQSMKQQFMD----KSTADNLAF 421
S+ R+ D V + L L+ +N L D S N S + QF+ ST N F
Sbjct: 145 SIPERRNFDSSVSVSNPL-LHWNNVDTLLRDGSLENVNNSRQDQFLPYKTFSSTISNSDF 203
Query: 422 S------THYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSSRS 475
+ ID K + NLN IN + +LK + L+ ++ S S +
Sbjct: 204 LHRESSFSSLIDEESKLASLRNLN---INDRPPLPVLKNSERNLLHRQLLSNHPFFSQNN 260
Query: 476 VGRQQNANISSLDFTNVSGDYSVNQKLNSLVNHHFDT 512
V N+ S DFT + D S+ Q N NH +T
Sbjct: 261 VSLSTNSKNYSTDFTKIQSDSSLLQ--NRQQNHRIET 295
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 30/107 (28%), Positives = 42/107 (39%)
Query: 412 DKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMN--STGF 469
D S N H I+ + + +L+ S I S Q + L+ S L+SK++ S
Sbjct: 280 DSSLLQNRQ-QNHRIETDQLSHFPDHLDPSRIPSPYQPSSLQPLESRKLHSKVDVHSKKL 338
Query: 470 GGSS------RSVGRQQNANI-SSLDFTNVSGDYSVNQKLNSLVNHH 509
S RS QN N SSL N + S + N V H
Sbjct: 339 NALSQLNPILRSENVLQNDNHHSSLSMDNDPTNVSTKNRNNQTVGEH 385
>TAIR|locus:2138258 [details] [associations]
symbol:PUM11 "pumilio 11" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AL161513 eggNOG:COG5099 EMBL:AL161813 HOGENOM:HOG000124802
IPI:IPI00541594 PIR:A85089 RefSeq:NP_192624.2 UniGene:At.54217
ProteinModelPortal:Q9LDW3 SMR:Q9LDW3 EnsemblPlants:AT4G08840.1
GeneID:826455 KEGG:ath:AT4G08840 TAIR:At4g08840 InParanoid:Q9LDW3
OMA:MSISDER PhylomeDB:Q9LDW3 Genevestigator:Q9LDW3 Uniprot:Q9LDW3
Length = 556
Score = 438 (159.2 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 112/333 (33%), Positives = 182/333 (54%)
Query: 685 NKTRSFELSDIVDH---VVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTD 741
NK S +L+ +VD V + DQ G R +Q+ ++ + IF E+I + L TD
Sbjct: 229 NKEDSLDLASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTD 288
Query: 742 VFGNYVIQKFFEHGTESQRAQLASQLT---GHVLRLSLQMYGCRVIQKALEVVHVDQQTQ 798
FGNY+IQK E E QR Q+ +LT G ++++S+ YG RV+QK +E V +Q
Sbjct: 289 PFGNYLIQKLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQIS 348
Query: 799 MV-AELDGSVMKCVHDQNGNHVIQKCIECI-PQDRIQFIISSFYGQVVALSTHPYGCRVI 856
+V + L + + NGNHVI C++ P D +FI+ + + ++T +GC V+
Sbjct: 349 LVKSALVPGFLSLFRELNGNHVILNCLKFFSPNDN-KFILEAATKFCIEIATTRHGCCVL 407
Query: 857 QRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQI 916
QR + + ++++ DEI ++ LAQD +GNY++Q+++E K V+ +L G
Sbjct: 408 QRCVSYSVGEQHEKLV-DEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNY 464
Query: 917 VRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLE 976
V+++ QKF S+VVEKCL + PE R ++NE++ + LQ DP+ NYV+Q L
Sbjct: 465 VKLATQKFGSHVVEKCLRY-YPESRSQIVNELVSVLNFGYLLQ----DPYANYVIQCALS 519
Query: 977 TCDDQSLELILSRIRVHLNVLKKYTYGKHIVSR 1009
++ ++R + N LK Y K I S+
Sbjct: 520 KTKGFVRASLVEKVRRYEN-LKMTPYCKRIFSK 551
>DICTYBASE|DDB_G0279557 [details] [associations]
symbol:DDB_G0279557 "pumilio RNA-binding
region-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 dictyBase:DDB_G0279557 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AAFI02000031 eggNOG:COG5099 RefSeq:XP_641698.1
ProteinModelPortal:Q54WL9 EnsemblProtists:DDB0305068 GeneID:8622107
KEGG:ddi:DDB_G0279557 InParanoid:Q54WL9 OMA:STHAANS Uniprot:Q54WL9
Length = 782
Score = 444 (161.4 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 99/322 (30%), Positives = 173/322 (53%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAAT-AEEKTRIFPEIIPHARTLMTDVFGNYVIQK 750
L +I + + Q G RF+Q+KLE +E T IF E+ H LM D +G Y+I +
Sbjct: 468 LEEITGQIYHLTKYQAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQ 527
Query: 751 FFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKC 810
++ +QR Q+ ++ V + +YG IQK L+ + DQ ++A + G V++
Sbjct: 528 LMKYCDNNQRRQIVDKIAPSVETFACHVYGIHGIQKLLQYLSPDQVESIIASIKGKVIQL 587
Query: 811 VHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQ 870
D GN++IQ ++ + QF+ + G + + TH GC V+ R + D+AN +Q
Sbjct: 588 SKDNKGNYLIQSFLKQFSPEVNQFVCDAIMGNIEEICTHKVGCTVVNRCI---DNANPEQ 644
Query: 871 I--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNV 928
+ ++D+I +H L QDQ+GNYV+QH+L K + + +I L I +S QKF+SNV
Sbjct: 645 LEKLVDKITEHSLKLVQDQFGNYVVQHLLSKNKAYS-SKLIVSLKDNIAELSIQKFSSNV 703
Query: 929 VEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILS 988
+EKCL +L+I + T+ + + ++++D + N+V+Q L+ +D ++
Sbjct: 704 IEKCLQLADTPTYELIIKAL---TEAD--ILSLLQDKYANFVIQTALDVSNDTQHAKLVK 758
Query: 989 RIRVHLNVLKKYTYGKHIVSRI 1010
I +++ +K Y HI +I
Sbjct: 759 IIVPYIHQIKT-PYVIHIQKKI 779
Score = 193 (73.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 63/307 (20%), Positives = 142/307 (46%)
Query: 673 RLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEII 732
R L+E ++ + +++ DH+ E D YG I Q ++ ++ +I +I
Sbjct: 486 RFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIVDKIA 545
Query: 733 PHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH 792
P T V+G + IQK ++ + Q + + + G V++LS G +IQ L+
Sbjct: 546 PSVETFACHVYGIHGIQKLLQYLSPDQVESIIASIKGKVIQLSKDNKGNYLIQSFLKQFS 605
Query: 793 VDQQTQMVAE-LDGSVMK-CVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHP 850
+ Q V + + G++ + C H + G V+ +CI+ ++++ ++ + L
Sbjct: 606 -PEVNQFVCDAIMGNIEEICTH-KVGCTVVNRCIDNANPEQLEKLVDKITEHSLKLVQDQ 663
Query: 851 YGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVIT 910
+G V+Q +L + A + ++I+ + ++ L+ ++ + VI+ L+ +I
Sbjct: 664 FGNYVVQHLLSK-NKAYSSKLIVS-LKDNIAELSIQKFSSNVIEKCLQLADTPTYELIIK 721
Query: 911 QLA-GQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNY 969
L I+ + Q K+A+ V++ L + + L+ ++ P +K P+ +
Sbjct: 722 ALTEADILSLLQDKYANFVIQTALDVSNDTQHAKLVKIIV-------PYIHQIKTPYVIH 774
Query: 970 VVQKVLE 976
+ +K+L+
Sbjct: 775 IQKKILQ 781
Score = 57 (25.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 50/207 (24%), Positives = 83/207 (40%)
Query: 282 SAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRS------SGSGLPPVGS 335
S++++P + + S I + S S+ +S + TTP Q +S SGSGL +
Sbjct: 228 SSSSTPSSLNS-SGGSISTSSSTSSPATSTN--TTPNTQAPFKSPRKLNTSGSGLTSIIP 284
Query: 336 RVGAVEKNGAVGSNVQNDIELADIAATLSGLSLSNIRHADEVSHVQ-SQLQLNPDNQSDF 394
+ E + SN+ + LS S S + Q S ++
Sbjct: 285 PGFSNESSPNTSSNIVSPSTTT--TTPLSSTSPSTTTTTTTPTSFQPSGGKMKKSPSMPV 342
Query: 395 LYDTSNGHNQSM--KQQFMDKSTADNLAFSTHYIDFTRKNGIVPN---LNASAIN-SNGQ 448
+ NG + K + +N +S I F+ I PN L++SA + S G
Sbjct: 343 IAGKLNGESLKSPNKPNLASNNNNNNNNYSNSNISFSN---IKPNNGSLSSSANSISTGL 399
Query: 449 VNILKRTSSPNLYSKMNSTGFG--GSS 473
N+ + N+YS + + G G GSS
Sbjct: 400 PNLSGGKINTNVYSSLGNIGSGMNGSS 426
Score = 51 (23.0 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 45/243 (18%), Positives = 90/243 (37%)
Query: 282 SAAASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPP-VGSRVGAV 340
+++ S L +S ++ S + S + T + Q +G S S P + S G++
Sbjct: 184 NSSISGSLPPLRSPRKVESVPSIPVLPLSSQQQTQQQQQPIGHPSSSSTPSSLNSSGGSI 243
Query: 341 EKNGAVGSNVQNDIELADIAATLSGLSLSNIRHADEVSHVQSQL--QLNPDNQSDFLYDT 398
+ + S + + A N + S + + +P+ S+ +
Sbjct: 244 STSSSTSSPATSTNTTPNTQAPFKSPRKLNTSGSGLTSIIPPGFSNESSPNTSSNIV--- 300
Query: 399 SNGHNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSP 458
S + ST T + K P++ A NG+ LK + P
Sbjct: 301 SPSTTTTTPLSSTSPSTTTTTTTPTSFQPSGGKMKKSPSMPVIAGKLNGES--LKSPNKP 358
Query: 459 NLYSKMNSTGFGGSSRSVG----RQQNANISSLDFTNVSGDYSVNQ-KLNSLVNHHFDTV 513
NL S N+ S+ ++ + N ++SS + +G +++ K+N+ V +
Sbjct: 359 NLASNNNNNNNNYSNSNISFSNIKPNNGSLSSSANSISTGLPNLSGGKINTNVYSSLGNI 418
Query: 514 GIG 516
G G
Sbjct: 419 GSG 421
Score = 43 (20.2 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 37/165 (22%), Positives = 71/165 (43%)
Query: 118 YSHENINPRLPPPLV-SKEDWRVAQ-RFQGGGSSLGD---IADWRKKGVN--GGD-RSSL 169
+ + I RL +V SK+D ++ R S+LG + D+ +K + GG ++ +
Sbjct: 100 HEYRGIIQRLKSIIVNSKDDNLMSMMRMVFSESNLGKSFLVDDYNQKRIPDIGGPIQNFV 159
Query: 170 F--SMQPGISVLQAENDLMELRNAARRNLSRDASAEWLERGSDRLIGVPAAGLGSRRKSF 227
F ++P N +AA ++S R + + +P L S++++
Sbjct: 160 FLGDVEPSQMSPTPLNSFFST-HAANSSISGSLPPLRSPRKVESVPSIPVLPLSSQQQTQ 218
Query: 228 ADILQEGLDRPASLSGHLSRPASCNAYGEIVGTGIADAHRAGSCN 272
Q+ + P+S S P+S N+ G + T + + A S N
Sbjct: 219 QQ--QQPIGHPSSSS----TPSSLNSSGGSISTSSSTSSPATSTN 257
Score = 42 (19.8 bits), Expect = 1.5e-39, Sum P(3) = 1.5e-39
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 21 NGNLSLEDSLQTELELILQRQPDRQIVNRERDVNI 55
N N+ LE++ E I+QR + I+ +D N+
Sbjct: 89 NNNIDLENNQTHEYRGIIQRL--KSIIVNSKDDNL 121
Score = 42 (19.8 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 443 INSNGQVNILKRTSSPNLYSKMNSTGFGGSSR 474
+N+ + ++ SS +L N+TGF S R
Sbjct: 13 LNNKTESPNIQNFSSASLQDDNNNTGFDDSDR 44
Score = 38 (18.4 bits), Expect = 1.4e-37, Sum P(3) = 1.4e-37
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 418 NLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGGSS 473
N FSTH + + + P + + S + +L +S + G SS
Sbjct: 175 NSFFSTHAANSSISGSLPPLRSPRKVESVPSIPVLPLSSQQQTQQQQQPIGHPSSS 230
Score = 37 (18.1 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 675 SSSLLDEFKTNKTRSF 690
+S L +F NKT+ F
Sbjct: 51 TSDFLKKFDKNKTKEF 66
>UNIPROTKB|H0YDC5 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 Ensembl:ENST00000525997 Uniprot:H0YDC5
Length = 217
Score = 423 (154.0 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 93/223 (41%), Positives = 132/223 (59%)
Query: 741 DVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMV 800
D G+ IQ E T ++R + +++ +L + ++G VIQK E ++Q+ +
Sbjct: 6 DQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALA 65
Query: 801 AELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVL 860
+ G V+ G VIQK +E IP D+ QV ALSTHPYGCRVIQR+L
Sbjct: 66 ERIRGHVLSLALQMYGCRVIQKALEFIPSDQ----------QVFALSTHPYGCRVIQRIL 115
Query: 861 EHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMS 920
EHC T I+ +E+ QH L QDQYGNYVIQHVLEHG+P +++ ++ ++ G ++ +S
Sbjct: 116 EHCLPDQTLPIL-EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLS 174
Query: 921 QQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMM 962
Q KFASNVVEKC+T S ER +LI+E+ D + L MM
Sbjct: 175 QHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMM 217
Score = 380 (138.8 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 92/213 (43%), Positives = 124/213 (58%)
Query: 701 EFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQR 760
EFS DQ+GSRFIQ KLE AT E+ +F EI+ A LM DVFGNYVIQKFFE G+ Q+
Sbjct: 2 EFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQK 61
Query: 761 AQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVI 820
LA ++ GHVL L+LQMYGCRVIQKALE + DQQ ++ H G VI
Sbjct: 62 LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVFALS---------THPY-GCRVI 111
Query: 821 QKCIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQH 879
Q+ +E C+P + I+ + L YG VIQ VLEH + +I+ EI +
Sbjct: 112 QRILEHCLPDQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVA-EIRGN 169
Query: 880 VCNLAQDQYGNYVIQHVLEHGKPHERTTVITQL 912
V L+Q ++ + V++ + H ER +I ++
Sbjct: 170 VLVLSQHKFASNVVEKCVTHASRTERAVLIDEV 202
Score = 206 (77.6 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 58/197 (29%), Positives = 94/197 (47%)
Query: 681 EFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMT 740
E T R ++I+ + D +G+ IQ+ E + E+K + I H +L
Sbjct: 18 ERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLAL 77
Query: 741 DVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMV 800
++G VIQK E Q+ V LS YGCRVIQ+ LE DQ ++
Sbjct: 78 QMYGCRVIQKALEFIPSDQQ----------VFALSTHPYGCRVIQRILEHCLPDQTLPIL 127
Query: 801 AELDGSVMKCVHDQNGNHVIQKCIEC-IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRV 859
EL + V DQ GN+VIQ +E P+D+ + I++ G V+ LS H + V+++
Sbjct: 128 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVAEIRGNVLVLSQHKFASNVVEKC 186
Query: 860 LEHCDDANTQQIIMDEI 876
+ H + +++DE+
Sbjct: 187 VTHASRTE-RAVLIDEV 202
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 37/150 (24%), Positives = 73/150 (48%)
Query: 872 IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEK 931
+ + I HV +LA YG VIQ LE P ++ Q+ +S + V+++
Sbjct: 64 LAERIRGHVLSLALQMYGCRVIQKALEF-IPSDQ---------QVFALSTHPYGCRVIQR 113
Query: 932 CLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIR 991
L P++ ++ E+ T++ +++D +GNYV+Q VLE + I++ IR
Sbjct: 114 ILEHCLPDQTLPILEELHQHTEQ------LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIR 167
Query: 992 VHLNVLKKYTYGKHIVSRIEKLIATGERRI 1021
++ VL ++ + ++V + + ER +
Sbjct: 168 GNVLVLSQHKFASNVVEKCVTHASRTERAV 197
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 920 SQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCD 979
SQ + S ++ L +P ERQL+ NE+L + + +M D FGNYV+QK E
Sbjct: 4 SQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQ------LMVDVFGNYVIQKFFEFGS 57
Query: 980 -DQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIGLSS 1025
+Q L L RIR H+ L YG ++ + + I + ++ LS+
Sbjct: 58 LEQKLALA-ERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVFALST 103
>POMBASE|SPCC1682.08c [details] [associations]
symbol:SPCC1682.08c "RNA-binding protein Mcp2"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007126
"meiosis" evidence=IEP] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
PomBase:SPCC1682.08c GO:GO:0007126 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 eggNOG:COG5099
EMBL:AB189990 PIR:T41065 RefSeq:NP_587801.1
ProteinModelPortal:O74438 EnsemblFungi:SPCC1682.08c.1
GeneID:2539137 KEGG:spo:SPCC1682.08c OMA:FNDSANG OrthoDB:EOG4QNR4B
NextBio:20800309 Uniprot:O74438
Length = 703
Score = 426 (155.0 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 97/329 (29%), Positives = 182/329 (55%)
Query: 690 FELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQ 749
++ + I+D ++ S DQ S F+QQKL+ ++ + K I II LM + FGN+++Q
Sbjct: 358 YDWNVIIDKII-VSNDQQSSIFLQQKLKISSYDMKQNIVDSIISQIHPLMLNRFGNFLVQ 416
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMK 809
+ FEHGT Q Q+ S + G++L+L+ +GC V+QKA++ V D + M+ EL ++
Sbjct: 417 RCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMMDELFLTIDV 476
Query: 810 CVHDQNGNHVIQKCIEC----IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDD 865
+ HV QK E P + + + ++ G+ ++ G V+Q + E+C +
Sbjct: 477 TIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNMFENCVE 536
Query: 866 ANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFA 925
+ ++ I +EI+ H+ +A+ Q+GN+V+QH++E+G+ + VI L + V S +FA
Sbjct: 537 KDKRECI-EEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFA 595
Query: 926 SNVVEKCLTFGSPEERQLLINEMLGS-TDEN-EPLQAMMKDPFGNYVVQKVLETCDDQSL 983
S V+EK + G L + ++ + D +PL + D +GNY++Q++++
Sbjct: 596 SKVIEKAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQIIQLGQPAEK 655
Query: 984 ELILSRIRVHLNVLKKYTYGKHIVSRIEK 1012
L+++ I+ H+ L+ YG+ + +EK
Sbjct: 656 NLVITHIKKHMVSLRGSKYGQKVAYLVEK 684
Score = 180 (68.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/269 (22%), Positives = 124/269 (46%)
Query: 693 SDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFF 752
S ++ ++++ +TD +G +Q+ ++ T + K + E+ + + +V QK F
Sbjct: 432 SAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMMDELFLTIDVTIMHHYACHVWQKLF 491
Query: 753 EHGTESQRAQLASQ----LTGHVLRLSLQMYGCRVIQKALE-VVHVDQQT---QMVAELD 804
E + ++ L G +++ G V+Q E V D++ +++ LD
Sbjct: 492 ETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIEEIIFHLD 551
Query: 805 GSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLE--- 861
G Q GN V+Q +E + ++ +I + + V S + +VI++ ++
Sbjct: 552 G----IARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIKSGP 607
Query: 862 -HCDDANTQQII---MDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIV 917
+ +QI +D Q + ++A DQYGNY+IQ +++ G+P E+ VIT + +V
Sbjct: 608 KNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMV 667
Query: 918 RMSQQKFASNVVEKCLTFGSPEERQLLIN 946
+ K+ V + S ++ +IN
Sbjct: 668 SLRGSKYGQKVAYLVEKWNSQKQVSSVIN 696
Score = 48 (22.0 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 291 RTKSHNRIPSHSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGAVGSNV 350
+ KSHN +PS + V S S+ +TP L G V +R + S
Sbjct: 233 KLKSHNSLPS--IRTNVRYSNSKPSTP---LSPEDVDLGTYTVKNRDSWSNEVNLSAST- 286
Query: 351 QNDIELADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSM 406
N++ + + TL SLS+ R + V S L QS +++T N N S+
Sbjct: 287 -NNLS-TNTSGTLKPYSLSSSRSSSYSKGVNSAASL----QS--IWETMNNSNPSV 334
Score = 47 (21.6 bits), Expect = 7.2e-37, Sum P(2) = 7.2e-37
Identities = 48/248 (19%), Positives = 91/248 (36%)
Query: 338 GAVEKNGAVGSNVQNDIELADIAATLSGLSLSNIRHADEVSHVQSQLQLNPDNQSDFLYD 397
GA +N A N + + ++ + G + + Q L+ + + L D
Sbjct: 91 GASSQNDAFAHNPSTSVSV-ELVRPVVGTKKHAVYATSAPKSMSLQDSLSVPSATA-LAD 148
Query: 398 TSNGHNQSMKQQFMDKSTADNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSS 457
S+ N S K + + F T + T +N + + + +NSN + R S
Sbjct: 149 VSSSLNYSRKLSSNSIKSTNAPVFGTAVKNVTGENILSASSSEENLNSNRNGDPKFRFSV 208
Query: 458 PNLYSKMNSTGFGGSSRSVGRQQNANI---SSLDFTNVSGDYSVNQKLNSLVNHHFDTVG 514
S N + S + + N + +SL + YS N K ++ ++ +G
Sbjct: 209 SPWISSSNFNPYEASLANF-QSDNCKLKSHNSLPSIRTNVRYS-NSKPSTPLSPEDVDLG 266
Query: 515 IGATRNLNGMVNQVALDFHSPPMDPR-------YAQYLQRTSDYA--TRSAASASDPFAA 565
+N + N+V L + + Y+ R+S Y+ SAAS +
Sbjct: 267 TYTVKNRDSWSNEVNLSASTNNLSTNTSGTLKPYSLSSSRSSSYSKGVNSAASLQSIWET 326
Query: 566 RNHFGSSL 573
N+ S+
Sbjct: 327 MNNSNPSV 334
Score = 42 (19.8 bits), Expect = 2.4e-36, Sum P(2) = 2.4e-36
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 395 LYDTSNGHN--QSMKQQFMDKSTADNLAFSTHYIDFTRK 431
L TS H+ +S++ + + N++ S Y D T+K
Sbjct: 8 LPSTSANHSISESLEHSKSELNELSNVSESESYFDITKK 46
>TAIR|locus:2011349 [details] [associations]
symbol:PUM9 "pumilio 9" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM;IDA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AC021198 eggNOG:COG5099 HOGENOM:HOG000124802 EMBL:DQ446324
IPI:IPI00533721 PIR:D86479 RefSeq:NP_174811.1 UniGene:At.51961
ProteinModelPortal:Q1PFN9 SMR:Q1PFN9 PRIDE:Q1PFN9
EnsemblPlants:AT1G35730.1 GeneID:840477 KEGG:ath:AT1G35730
TAIR:At1g35730 InParanoid:Q1PFN9 OMA:CAEIAIH PhylomeDB:Q1PFN9
ProtClustDB:CLSN2681930 Genevestigator:Q1PFN9 Uniprot:Q1PFN9
Length = 564
Score = 412 (150.1 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 113/392 (28%), Positives = 194/392 (49%)
Query: 620 MQYSGNTFANPVLPSVGS--GSFPNERNSRFTXXXXXXXXXXXXWHLDAGINMEGRLSSS 677
+ + GN + L ++ + G +P E +S + +L+ + + G+ S
Sbjct: 176 LMFEGNNRVSQTLAAMEASRGFYPEEDSSLLSPFHEKVSGKLGASYLEDTV-LIGQGSYG 234
Query: 678 LLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHART 737
+ N S + +I V + DQ G R +Q+ +E T E I II H
Sbjct: 235 KMSPKSNNDLVS--MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVE 292
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTGH---VLRLSLQMYGCRVIQKALEVVHVD 794
L D FGNY++QK F+ E QR + S LT + ++R+ L YG RV+QK +E V
Sbjct: 293 LSMDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTK 352
Query: 795 QQTQMVAE-LDGSVMKCVHDQNGNHVIQKCIECI-PQDRIQFIISSFYGQVVALSTHPYG 852
QQ +V L + V D NGNHVIQ C++ + P D +F++ + ++ H +G
Sbjct: 353 QQIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDN-EFVLEAATKYCAEIAIHRHG 411
Query: 853 CRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQL 912
C V+Q + + ++++ EI ++ +L+QD +GNYV+Q++++ + ++ Q
Sbjct: 412 CCVLQCCISNSVGLQRERLVA-EISRNSLHLSQDPFGNYVVQYLID--QQVSAVKLLVQF 468
Query: 913 AGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQ 972
++ QKF+S+V+EKCL PE R ++ E+L + + +++DP+ NYV+Q
Sbjct: 469 RMHYAELATQKFSSHVIEKCLR-KYPESRAEIVRELLCVPN----FEYLLQDPYANYVIQ 523
Query: 973 KVLETCDDQSLELILSRIRVHLNVLKKYTYGK 1004
+L + +R L V K Y YGK
Sbjct: 524 T--------ALSVTKGPVRAKL-VAKVYRYGK 546
>SGD|S000002982 [details] [associations]
symbol:PUF4 "Member of the PUF protein family" species:4932
"Saccharomyces cerevisiae" [GO:0008104 "protein localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003729
"mRNA binding" evidence=ISS;IDA] [GO:0001308 "negative regulation
of chromatin silencing involved in replicative cell aging"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IGI]
[GO:0017148 "negative regulation of translation" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SGD:S000002982 GO:GO:0005737 GO:GO:0008104
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:BK006941
GO:GO:0017148 GO:GO:0003729 GO:GO:0006351 EMBL:S58126 GO:GO:0000288
eggNOG:COG5099 GeneTree:ENSGT00390000017241 GO:GO:0001308
OrthoDB:EOG42NN7Z EMBL:S57889 EMBL:Z72536 PIR:S64016
RefSeq:NP_011501.1 PDB:3BWT PDB:3BX2 PDB:3BX3 PDB:4DZS PDBsum:3BWT
PDBsum:3BX2 PDBsum:3BX3 PDBsum:4DZS ProteinModelPortal:P25339
SMR:P25339 DIP:DIP-2638N IntAct:P25339 MINT:MINT-425380
STRING:P25339 PaxDb:P25339 PeptideAtlas:P25339 EnsemblFungi:YGL014W
GeneID:852870 KEGG:sce:YGL014W CYGD:YGL014w HOGENOM:HOG000115799
OMA:FRRQTFH EvolutionaryTrace:P25339 NextBio:972496
Genevestigator:P25339 GermOnline:YGL014W Uniprot:P25339
Length = 888
Score = 438 (159.2 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 107/330 (32%), Positives = 174/330 (52%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKF 751
L + + DQ+G RF+Q++L+ ++ IF E + LMTD FGNY+IQK
Sbjct: 561 LDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKL 620
Query: 752 FEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKC 810
E T QR L + H + +SL +G R +QK +E + D++ Q+V + L ++
Sbjct: 621 LEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQL 680
Query: 811 VHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQ 870
D NGNHVIQKC++ + + QFI + + ++TH +GC V+QR L+H T+Q
Sbjct: 681 SKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDH---GTTEQ 737
Query: 871 I--IMDEIMQHVCNLAQDQYGNYVIQHVL----EHGKPHERTTVITQLAGQIVRMSQQKF 924
+ D+++ V L D +GNYV+Q+++ E K ++ L + + +S KF
Sbjct: 738 CDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKF 797
Query: 925 ASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLE 984
SNV+EK L E +L E+L + E +Q+++ D +GNYV+Q L+ Q+
Sbjct: 798 GSNVIEKILKTAIVSEPMIL--EILNNGGETG-IQSLLNDSYGNYVLQTALDISHKQNDY 854
Query: 985 LI--LSRIRVHLNV--LKKYTYGKHIVSRI 1010
L LS I L V ++ +GK I+ +
Sbjct: 855 LYKRLSEIVAPLLVGPIRNTPHGKRIIGML 884
Score = 246 (91.7 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 68/279 (24%), Positives = 134/279 (48%)
Query: 749 QKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVM 808
Q+ E + A L Q G + L +GCR +QK L+++ + E +
Sbjct: 547 QRKIEESSRFADAVL-DQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTV 605
Query: 809 KCVHDQNGNHVIQKCIECIPQDRIQFIISSFYG-QVVALSTHPYGCRVIQRVLEHCDDAN 867
+ + D GN++IQK +E + ++ + +++ V +S +P+G R +Q+++E
Sbjct: 606 ELMTDSFGNYLIQKLLEEVTTEQ-RIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDE 664
Query: 868 TQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASN 927
QI++D + + L++D GN+VIQ L+ KP + ++ + ++ +
Sbjct: 665 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCC 724
Query: 928 VVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELIL 987
V+++CL G+ E+ L +++L D+ + DPFGNYVVQ ++ T + + +
Sbjct: 725 VLQRCLDHGTTEQCDNLCDKLLALVDK------LTLDPFGNYVVQYII-TKEAEKNKYDY 777
Query: 988 SRIRVHLNV-----LKKYTYGKHIVSRIEKLIATGERRI 1021
+ VHL L + +G +++ +I K E I
Sbjct: 778 THKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMI 816
Score = 188 (71.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 67/300 (22%), Positives = 136/300 (45%)
Query: 713 QQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEH-GTESQRAQLASQLTGHV 771
Q+K+E ++ + + I +L D G +QK + G+++ A + + +
Sbjct: 547 QRKIEESSRFADA-VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADA-IFEETKDYT 604
Query: 772 LRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDR 831
+ L +G +IQK LE V +Q+ + ++ + +G +QK IECI D
Sbjct: 605 VELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDE 664
Query: 832 -IQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGN 890
Q ++ S V LS G VIQ+ L+ N Q I D I ++A ++G
Sbjct: 665 EAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQ-FIFDAISDSCIDIATHRHGC 723
Query: 891 YVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLG 950
V+Q L+HG + + +L + +++ F + VV+ +T + + + ++++
Sbjct: 724 CVLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVH 783
Query: 951 STDENEPLQAMMKDPFGNYVVQKVLETC---DDQSLELILSRIRVHLNVLKKYTYGKHIV 1007
++ K FG+ V++K+L+T + LE++ + + L +YG +++
Sbjct: 784 LLKPRAIELSIHK--FGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVL 841
Score = 40 (19.1 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 28/134 (20%), Positives = 55/134 (41%)
Query: 435 VPNLNASAINSNGQVNILKRTSSPNLYSKMNSTGFGG--SSRS-VGRQQNANISSLDFTN 491
+P +N++ +G+ N SS N + ++ + + RS VG+ +N S + N
Sbjct: 464 MPLMNSANNKHHGRNN--NSMSSHNDNDNIGNSNYNNKDTGRSNVGKMKNMKNSYHGYYN 521
Query: 492 VSGDYSVNQKLNSLVNHHFDTVGIG------ATRNLNGMVNQVALDFHSPPMDPRYAQYL 545
+ + + N N+ N ++R + +++Q HS D ++L
Sbjct: 522 NNNNNNNNNNNNNNSNATNSNSAEKQRKIEESSRFADAVLDQYIGSIHSLCKDQHGCRFL 581
Query: 546 QRTSDYATRSAASA 559
Q+ D AA A
Sbjct: 582 QKQLDILGSKAADA 595
>TAIR|locus:2011360 [details] [associations]
symbol:PUM10 "pumilio 10" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AC021198 eggNOG:COG5099 HSSP:Q14671 IPI:IPI00544215 PIR:F86479
RefSeq:NP_174813.1 UniGene:At.51962 ProteinModelPortal:Q9LP21
SMR:Q9LP21 PRIDE:Q9LP21 EnsemblPlants:AT1G35750.1 GeneID:840480
KEGG:ath:AT1G35750 TAIR:At1g35750 HOGENOM:HOG000124802
InParanoid:Q9LP21 OMA:GFEEMMA PhylomeDB:Q9LP21
Genevestigator:Q9LP21 Uniprot:Q9LP21
Length = 528
Score = 403 (146.9 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 106/348 (30%), Positives = 176/348 (50%)
Query: 670 MEGRLSSSLLDEFKTNKTRSFELSDIVD---HVVEFSTDQYGSRFIQQKLEAATAEEKTR 726
MEG +S DE K N +L +V+ V + DQ G R +Q+ +E T +
Sbjct: 187 MEGS-GASYPDEPKINGGLPLDLVSMVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKV 245
Query: 727 IFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTG---HVLRLSLQMYGCRV 783
IF EII H L D GNY++QK E QR + S LT ++++ L G RV
Sbjct: 246 IFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRV 305
Query: 784 IQKALEVVHVDQQTQMV-AELDGSVMKCVHDQNGNHVIQKCIE-CIPQDRIQFIISSFYG 841
IQK ++ V QQ +V + L+ + V+D NG HV+Q C+E +P D +F++ +
Sbjct: 306 IQKMIKTVKTKQQIALVKSALEPGFLVLVNDSNGYHVLQSCLEFLVPNDN-KFVVEAATE 364
Query: 842 QVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGK 901
L+TH YGC V+Q L + ++++ EI + L+QD +GNYV+Q +++ +
Sbjct: 365 YCAQLATHQYGCYVLQCSLINTVGLQHERLVA-EISRDSLRLSQDPFGNYVVQCLID--Q 421
Query: 902 PHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAM 961
++ + ++ QKF+S+V+EKCL PE R ++ E+L + + +
Sbjct: 422 QVSSVNLLLPFRTHCIELATQKFSSHVIEKCLR-KYPESRAEIVRELLSYPN----FEQL 476
Query: 962 MKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSR 1009
++DP+ NYV+Q L ++ +++ L+ Y K I S+
Sbjct: 477 LQDPYANYVIQTALSVTKGAVRARLVEKVK-RFGKLQSNPYCKKIFSK 523
>POMBASE|SPAC4G9.05 [details] [associations]
symbol:mpf1 "meiotic PUF family protein 1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0007126
"meiosis" evidence=IEP] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
PomBase:SPAC4G9.05 GO:GO:0007126 GO:GO:0005737 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CU329670_GR GO:GO:0003729 eggNOG:COG5099
OrthoDB:EOG4QNR4B EMBL:AB248102 PIR:T38864 RefSeq:NP_593687.1
ProteinModelPortal:Q10238 EnsemblFungi:SPAC4G9.05.1 GeneID:2543134
KEGG:spo:SPAC4G9.05 NextBio:20804161 Uniprot:Q10238
Length = 581
Score = 397 (144.8 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 93/326 (28%), Positives = 172/326 (52%)
Query: 695 IVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEH 754
+++ ++ F DQ S +QQ+L+ E+ + I+P + TLM + FGN++IQK FE+
Sbjct: 257 MIEQII-FQNDQAASLSLQQQLKNEDIEDNINLINTILPFSVTLMKNKFGNFLIQKCFEY 315
Query: 755 GTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQ 814
TE+Q + L HV LS+ +G V+QK+LE+ ++ EL + + +
Sbjct: 316 STEAQLQSFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATLMQR 375
Query: 815 NGNHVIQKCIECIPQDRIQFIISSF----YGQVVALSTHPYGCRVIQRVLEHCDDANTQQ 870
+ HV QK E + + I F G+ + +S G V+Q + E+C + + ++
Sbjct: 376 HSCHVWQKFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENCKEKD-KR 434
Query: 871 IIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVE 930
+DEI+ ++ + Q+GN+VIQH++EHG ++ ++ L ++ S ++AS VVE
Sbjct: 435 TCLDEIINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKVVE 494
Query: 931 KCLTFGSPEERQLLINEMLGSTDENE-P---LQAMMKDPFGNYVVQKVLETCDDQSLELI 986
+ L + E+ +T +NE P LQ + + +GNY+VQ +L+ + L+
Sbjct: 495 RALRVCHVTFFDRYVKEI--TTPQNELPTIFLQEIASNQYGNYIVQYLLQVATPSQINLM 552
Query: 987 LSRIRVHLNVLKKYTYGKHIVSRIEK 1012
++ H+ L+ + YG+ I + +EK
Sbjct: 553 AEHLKKHMVSLRGHKYGQRIAALVEK 578
Score = 191 (72.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 68/266 (25%), Positives = 121/266 (45%)
Query: 681 EFKTN-KTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLM 739
E+ T + +SF + HV E S D +GS +Q+ LE + E+I +
Sbjct: 314 EYSTEAQLQSFSYF-LKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATL 372
Query: 740 TDVFGNYVIQKFFEHGTESQRAQLAS----QLTGHVLRLSLQMYGCRVIQKALEVVHVDQ 795
+V QKFFE +S + ++ G L++S+ G V+Q E
Sbjct: 373 MQRHSCHVWQKFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENCKEKD 432
Query: 796 QTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRV 855
+ + E+ ++ + + Q GN VIQ IE + Q I++S +V + ST+ Y +V
Sbjct: 433 KRTCLDEIINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKV 492
Query: 856 IQRVLEHCD----DANTQQII--MDEIMQ-HVCNLAQDQYGNYVIQHVLEHGKPHERTTV 908
++R L C D ++I +E+ + +A +QYGNY++Q++L+ P + +
Sbjct: 493 VERALRVCHVTFFDRYVKEITTPQNELPTIFLQEIASNQYGNYIVQYLLQVATPSQINLM 552
Query: 909 ITQLAGQIVRMSQQKFASNV---VEK 931
L +V + K+ + VEK
Sbjct: 553 AEHLKKHMVSLRGHKYGQRIAALVEK 578
Score = 144 (55.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 60/271 (22%), Positives = 122/271 (45%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIP-HARTLMTDVFGNYVIQK 750
++ I+ V +++G+ IQ+ E +T E + + F + H + L D FG++V+QK
Sbjct: 289 INTILPFSVTLMKNKFGNFLIQKCFEYST-EAQLQSFSYFLKKHVKELSIDAFGSHVLQK 347
Query: 751 FFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH---VDQQ-TQMVAELDGS 806
E E L +L + +Q + C V QK E VD ++ G
Sbjct: 348 SLEIYPERFTNNLIEELIECLPATLMQRHSCHVWQKFFETRRKSLVDGIFDHFNKKMQGK 407
Query: 807 VMKCVHDQNGNHVIQKCIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDD 865
++ + G+ V+Q E C +D+ + + + + +G VIQ ++EH +
Sbjct: 408 WLQVSVSEMGSLVVQTIFENCKEKDK-RTCLDEIINNMDQIICGQWGNWVIQHIIEHGSE 466
Query: 866 ANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLE--HGKPHER-TTVITQLAGQIVRMSQQ 922
+ Q+I+ + +++ V + + ++Y + V++ L H +R IT ++ + Q
Sbjct: 467 PDKQRIL-NSLLKEVESYSTNRYASKVVERALRVCHVTFFDRYVKEITTPQNELPTIFLQ 525
Query: 923 KFASN-----VVEKCLTFGSPEERQLLINEM 948
+ ASN +V+ L +P + L+ +
Sbjct: 526 EIASNQYGNYIVQYLLQVATPSQINLMAEHL 556
Score = 42 (19.8 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 402 HNQSMKQQFMDKSTADNLAFSTH--YIDFTRKNGIVPNLN 439
+N S+ S N FSTH +D + N + LN
Sbjct: 133 NNCSLSSGIFTNSNGTNNCFSTHPKSLDDAKDNVVPKKLN 172
>SGD|S000003146 [details] [associations]
symbol:MPT5 "mRNA-binding protein of the PUF family"
species:4932 "Saccharomyces cerevisiae" [GO:0030674 "protein
binding, bridging" evidence=IPI] [GO:0045947 "negative regulation
of translational initiation" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:1900153 "positive regulation of nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0017148 "negative regulation of translation" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SGD:S000003146 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:BK006941 GO:GO:0045947
GO:GO:0003729 eggNOG:COG5099 GeneTree:ENSGT00390000017241
EMBL:X83690 EMBL:Z72700 EMBL:D25541 EMBL:D26184 PIR:S64195
RefSeq:NP_011337.1 ProteinModelPortal:P39016 SMR:P39016
DIP:DIP-2271N IntAct:P39016 MINT:MINT-2779525 STRING:P39016
PaxDb:P39016 PRIDE:P39016 EnsemblFungi:YGL178W GeneID:852697
KEGG:sce:YGL178W CYGD:YGL178w HOGENOM:HOG000113640 OMA:ISINQYG
OrthoDB:EOG42NN7Z NextBio:972038 Genevestigator:P39016
GermOnline:YGL178W GO:GO:1900153 Uniprot:P39016
Length = 859
Score = 353 (129.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 87/255 (34%), Positives = 145/255 (56%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTR--IFPEIIPHARTLMTDVFGNYVIQ 749
L D+ D++ + +TDQ+G RF+Q+KLE + R ++ +I P L+ D FGNY++Q
Sbjct: 210 LRDL-DYI-KLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 267
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVA-----ELD 804
K ++ T Q+ L + +V ++S+ YG R +QK ++ V + Q ++ E
Sbjct: 268 KLCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFT 327
Query: 805 G--SVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQ--VVALSTHPYGCRVIQRVL 860
V+ ++D NGNHVIQKCI + FII + Q ++ +STH +GC V+Q++L
Sbjct: 328 SIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLL 387
Query: 861 EHCDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKP--HERTTVITQLAGQI 916
C QQI I +I+Q + L DQ+GNY+IQ +L+ + + + +L+ ++
Sbjct: 388 SVC---TLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNEL 444
Query: 917 VRMSQQKFASNVVEK 931
++S KF+SNVVEK
Sbjct: 445 CQLSCLKFSSNVVEK 459
Score = 152 (58.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 38/174 (21%), Positives = 87/174 (50%)
Query: 844 VALSTHPYGCRVIQRVLEHCDDAN-TQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKP 902
+ L+T +GCR +Q+ LE ++N + ++ ++I +L D +GNY++Q + ++
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTA 275
Query: 903 HERTTVITQLAGQIVRMSQQKFASNVVEKCL-TFGSPEERQLLINEMLGSTDENEPLQAM 961
++T +I + + ++S ++ + ++K + T + + L+I E + +
Sbjct: 276 EQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVTL 335
Query: 962 MKDPFGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIA 1015
+ D GN+V+QK + I+ I N++ T+ KH ++KL++
Sbjct: 336 INDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTH-KHGCCVLQKLLS 388
Score = 134 (52.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 45/209 (21%), Positives = 100/209 (47%)
Query: 664 LDAGINMEGRLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEE 723
LD ++ G L ++ T + ++ + I +V + S +QYG+R +Q+ ++ E
Sbjct: 254 LDLILDPFGNYLVQKLCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEV 313
Query: 724 KTRI----FPE---IIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLT--GHVLRL 774
+ + F + I TL+ D+ GN+VIQK + S+ + + +++ +
Sbjct: 314 QIDLIIKGFSQEFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITI 373
Query: 775 SLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQD--RI 832
S +GC V+QK L V + Q ++ ++ + ++DQ GN++IQ ++ D +
Sbjct: 374 STHKHGCCVLQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLL 433
Query: 833 QFIISSFYGQVVALSTHPYGCRVIQRVLE 861
+ + ++ LS + V+++ ++
Sbjct: 434 AELFNRLSNELCQLSCLKFSSNVVEKFIK 462
Score = 46 (21.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 424 HYIDFTRKNGIVPNLNAS-AINSNGQVNILKRTSSPNLYSKMNSTGFGGS 472
H +D + N + + + A+ +N + + SPN + NSTG S
Sbjct: 64 HSLDLSGFNQFISSTQSPLALMNNTSTSNSANSFSPNPNAASNSTGLSAS 113
>WB|WBGene00022257 [details] [associations]
symbol:puf-11 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0009792 GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000003 GO:GO:0003723 EMBL:FO081731
eggNOG:COG5099 GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078
RefSeq:NP_741425.1 ProteinModelPortal:Q8IU00 SMR:Q8IU00
IntAct:Q8IU00 STRING:Q8IU00 PaxDb:Q8IU00 EnsemblMetazoa:Y73B6BL.38
GeneID:177406 KEGG:cel:CELE_Y73B6BL.38 UCSC:Y73B6BL.38 CTD:177406
WormBase:Y73B6BL.38 InParanoid:Q8IU00 OMA:HVVKCGG NextBio:896676
Uniprot:Q8IU00
Length = 505
Score = 312 (114.9 bits), Expect = 9.2e-25, P = 9.2e-25
Identities = 91/292 (31%), Positives = 151/292 (51%)
Query: 685 NKTRSFELSDIV--DHVVEFSTDQYGSRFIQQKLEAATAEE-KTRIFPEIIPHAR---TL 738
N + S L D++ D +VEF+TD+ G RF+Q+ + + ++F +++ +L
Sbjct: 133 NVSDSVTLPDVLANDALVEFATDKNGCRFLQEHYPTESDNDIHQKLFRKLVEDRAIFLSL 192
Query: 739 MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQ 798
++FGN+ +Q+ E ++ L L + L L CRVIQ A++ + V T+
Sbjct: 193 CCNMFGNFFVQRVLECSNTEEQEILTEHLASDLYNLCLDKSACRVIQLAIQKLDVHLATR 252
Query: 799 MVAEL-DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQ--VVALSTHPYGCRV 855
+ EL D +++ DQNGNHVIQK ++ +P F++ F ++ + YGCRV
Sbjct: 253 LSLELRDTYLVRLSIDQNGNHVIQKIVKTLPVSAWSFVVEFFADDDNLIHVCQDKYGCRV 312
Query: 856 IQRVLEHCDD---ANTQQ---IIMDEIMQHV---CN-LAQDQYGNYVIQHVLEHGKPHE- 904
IQ +E A Q +++ +M V C+ LA +++ NYV+QHV++ G
Sbjct: 313 IQSTVETLSSDTYAECYQQRVVLLRSLMSGVTRNCSQLASNEFANYVVQHVIKCGDAMAV 372
Query: 905 -RTTVITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDE 954
R +I Q L ++ MSQ+K+AS+VVE + FG R L EM+ E
Sbjct: 373 YRDVIIEQCLLQNLLSMSQEKYASHVVE--VAFGCAPCR--LAAEMMNEIFE 420
Score = 199 (75.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 91/334 (27%), Positives = 154/334 (46%)
Query: 705 DQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLA 764
+ +G+ F+Q+ LE + EE+ + + L D VIQ + +L+
Sbjct: 195 NMFGNFFVQRVLECSNTEEQEILTEHLASDLYNLCLDKSACRVIQLAIQKLDVHLATRLS 254
Query: 765 SQLTG-HVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKC 823
+L +++RLS+ G VIQK ++ + V + V E D N HV Q
Sbjct: 255 LELRDTYLVRLSIDQNGNHVIQKIVKTLPVSAWS-FVVEFFAD------DDNLIHVCQDK 307
Query: 824 IECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNL 883
C R+ I S V LS+ Y QRV+ + +M + ++ L
Sbjct: 308 YGC----RV---IQS---TVETLSSDTYAECYQQRVV-------LLRSLMSGVTRNCSQL 350
Query: 884 AQDQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEE 940
A +++ NYV+QHV++ G R +I Q L ++ MSQ+K+AS+VVE + FG
Sbjct: 351 ASNEFANYVVQHVIKCGDAMAVYRDVIIEQCLLQNLLSMSQEKYASHVVE--VAFGCAPC 408
Query: 941 RQL--LINEM----LGSTDEN-EPLQAMMKDPFGNYVVQKVLETC------DDQS----- 982
R ++NE+ + D N + L ++ +GNYVVQK+++ C DQ
Sbjct: 409 RLAAEMMNEIFEGYIPHPDTNRDALDILLFHQYGNYVVQKMIQICVLGQNARDQKQAEMY 468
Query: 983 ---LELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
LE I R+ + N L++++ GK I+ ++ +
Sbjct: 469 GMWLEKIRERVMRNANRLERFSSGKKIIEALQSM 502
>WB|WBGene00004239 [details] [associations]
symbol:puf-3 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0035046 "pronuclear
migration" evidence=IMP] [GO:0009992 "cellular water homeostasis"
evidence=IMP] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0009792 GO:GO:0035046
GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000910 GO:GO:0003730 GO:GO:0009992 EMBL:AL021488
eggNOG:COG5099 GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078
HSSP:Q14671 RefSeq:NP_502606.1 ProteinModelPortal:Q9U2G4 SMR:Q9U2G4
IntAct:Q9U2G4 MINT:MINT-251162 STRING:Q9U2G4 PaxDb:Q9U2G4
EnsemblMetazoa:Y45F10A.2.1 EnsemblMetazoa:Y45F10A.2.2 GeneID:178320
KEGG:cel:CELE_Y45F10A.2 UCSC:Y45F10A.2.1 CTD:178320
WormBase:Y45F10A.2 InParanoid:Q9U2G4 OMA:HNEPANA NextBio:900640
Uniprot:Q9U2G4
Length = 502
Score = 306 (112.8 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 92/292 (31%), Positives = 151/292 (51%)
Query: 685 NKTRSFELSDIV--DHVVEFSTDQYGSRFIQQKLEAATAEE-KTRIFPEIIPHAR---TL 738
N + S L D++ D +VEF+TD+ G RF+Q+ + ++F +++ +L
Sbjct: 130 NVSDSVTLQDVLANDALVEFATDKNGCRFLQEHYPTENDNDVHQKLFRKLVEDRAIFLSL 189
Query: 739 MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQ 798
+++FGN+ +Q+ E ++ L L + L L CRVIQ A++ + V T+
Sbjct: 190 CSNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATR 249
Query: 799 MVAEL-DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQ--VVALSTHPYGCRV 855
+ EL D +++ DQNGNHVIQK ++ +P F++ F ++ + YGCRV
Sbjct: 250 LSLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFFADDDNLIHVCQDKYGCRV 309
Query: 856 IQRVLE--HCDD-ANTQQ---IIMDEIMQHV---CN-LAQDQYGNYVIQHVLEHGKPHE- 904
IQ +E D A Q I++ +M V C LA +++ NYV+QHV++ G
Sbjct: 310 IQSTVETLSTDQYAQCYQHRVILLRSLMAGVTRNCTQLASNEFANYVVQHVIKCGDALAV 369
Query: 905 -RTTVITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDE 954
R +I Q L ++ MSQ+K+AS+VVE + F R L+ EM+ E
Sbjct: 370 YRDIIIEQCLLQNLLSMSQEKYASHVVE--VAFECAPYR--LVAEMMNEIFE 417
Score = 201 (75.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 90/333 (27%), Positives = 152/333 (45%)
Query: 704 TDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQL 763
++ +G+ F+Q+ LE + EE+ + + L D VIQ + +L
Sbjct: 191 SNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATRL 250
Query: 764 ASQLTG-HVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQK 822
+ +L H++RLS+ G VIQK ++ + V T +V D N HV Q
Sbjct: 251 SLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFF-------ADDDNLIHVCQD 303
Query: 823 CIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCN 882
C R+ I S V LST Y RV+ + +M + ++
Sbjct: 304 KYGC----RV---IQS---TVETLSTDQYAQCYQHRVI-------LLRSLMAGVTRNCTQ 346
Query: 883 LAQDQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQIVRMSQQKFASNVVE---KCLTFG 936
LA +++ NYV+QHV++ G R +I Q L ++ MSQ+K+AS+VVE +C +
Sbjct: 347 LASNEFANYVVQHVIKCGDALAVYRDIIIEQCLLQNLLSMSQEKYASHVVEVAFECAPYR 406
Query: 937 SPEERQLLINE-MLGSTDEN-EPLQAMMKDPFGNYVVQKVLETC------DDQS------ 982
E I E + D N + L ++ +GNYVVQ++++TC DQ
Sbjct: 407 LVAEMMNEIFEGYIPHPDTNRDALDILLFHQYGNYVVQQMIQTCVLGQNARDQKQSEMYG 466
Query: 983 --LELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
LE I R+ + + L++++ GK I+ ++ +
Sbjct: 467 MWLEKIHGRVMRNAHRLERFSSGKKIIEALQSM 499
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 55/270 (20%), Positives = 115/270 (42%)
Query: 755 GTESQRAQLASQLTGHVL-RLSLQMYGCRVIQKALEVVHV-DQQTQMVAEL--DGSV-MK 809
G S L L L + GCR +Q+ + D ++ +L D ++ +
Sbjct: 129 GNVSDSVTLQDVLANDALVEFATDKNGCRFLQEHYPTENDNDVHQKLFRKLVEDRAIFLS 188
Query: 810 CVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQ 869
+ GN +Q+ +EC + + + + L CRVIQ ++ D
Sbjct: 189 LCSNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLAT 248
Query: 870 QIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ--IVRMSQQKFASN 927
++ ++ H+ L+ DQ GN+VIQ +++ T ++ A ++ + Q K+
Sbjct: 249 RLSLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFFADDDNLIHVCQDKYGCR 308
Query: 928 VVEKCLTFGSPEE-------RQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDD 980
V++ + S ++ R +L+ ++ N + + F NYVVQ V++ D
Sbjct: 309 VIQSTVETLSTDQYAQCYQHRVILLRSLMAGVTRN--CTQLASNEFANYVVQHVIKCGDA 366
Query: 981 QSL--ELILSRIRV-HLNVLKKYTYGKHIV 1007
++ ++I+ + + +L + + Y H+V
Sbjct: 367 LAVYRDIIIEQCLLQNLLSMSQEKYASHVV 396
>UNIPROTKB|Q9U2G4 [details] [associations]
symbol:puf-3 "Protein PUF-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0009792 GO:GO:0035046
GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000910 GO:GO:0003730 GO:GO:0009992 EMBL:AL021488
eggNOG:COG5099 GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078
HSSP:Q14671 RefSeq:NP_502606.1 ProteinModelPortal:Q9U2G4 SMR:Q9U2G4
IntAct:Q9U2G4 MINT:MINT-251162 STRING:Q9U2G4 PaxDb:Q9U2G4
EnsemblMetazoa:Y45F10A.2.1 EnsemblMetazoa:Y45F10A.2.2 GeneID:178320
KEGG:cel:CELE_Y45F10A.2 UCSC:Y45F10A.2.1 CTD:178320
WormBase:Y45F10A.2 InParanoid:Q9U2G4 OMA:HNEPANA NextBio:900640
Uniprot:Q9U2G4
Length = 502
Score = 306 (112.8 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 92/292 (31%), Positives = 151/292 (51%)
Query: 685 NKTRSFELSDIV--DHVVEFSTDQYGSRFIQQKLEAATAEE-KTRIFPEIIPHAR---TL 738
N + S L D++ D +VEF+TD+ G RF+Q+ + ++F +++ +L
Sbjct: 130 NVSDSVTLQDVLANDALVEFATDKNGCRFLQEHYPTENDNDVHQKLFRKLVEDRAIFLSL 189
Query: 739 MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQ 798
+++FGN+ +Q+ E ++ L L + L L CRVIQ A++ + V T+
Sbjct: 190 CSNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATR 249
Query: 799 MVAEL-DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQ--VVALSTHPYGCRV 855
+ EL D +++ DQNGNHVIQK ++ +P F++ F ++ + YGCRV
Sbjct: 250 LSLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFFADDDNLIHVCQDKYGCRV 309
Query: 856 IQRVLE--HCDD-ANTQQ---IIMDEIMQHV---CN-LAQDQYGNYVIQHVLEHGKPHE- 904
IQ +E D A Q I++ +M V C LA +++ NYV+QHV++ G
Sbjct: 310 IQSTVETLSTDQYAQCYQHRVILLRSLMAGVTRNCTQLASNEFANYVVQHVIKCGDALAV 369
Query: 905 -RTTVITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDE 954
R +I Q L ++ MSQ+K+AS+VVE + F R L+ EM+ E
Sbjct: 370 YRDIIIEQCLLQNLLSMSQEKYASHVVE--VAFECAPYR--LVAEMMNEIFE 417
Score = 201 (75.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 90/333 (27%), Positives = 152/333 (45%)
Query: 704 TDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQL 763
++ +G+ F+Q+ LE + EE+ + + L D VIQ + +L
Sbjct: 191 SNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATRL 250
Query: 764 ASQLTG-HVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQK 822
+ +L H++RLS+ G VIQK ++ + V T +V D N HV Q
Sbjct: 251 SLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFF-------ADDDNLIHVCQD 303
Query: 823 CIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCN 882
C R+ I S V LST Y RV+ + +M + ++
Sbjct: 304 KYGC----RV---IQS---TVETLSTDQYAQCYQHRVI-------LLRSLMAGVTRNCTQ 346
Query: 883 LAQDQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQIVRMSQQKFASNVVE---KCLTFG 936
LA +++ NYV+QHV++ G R +I Q L ++ MSQ+K+AS+VVE +C +
Sbjct: 347 LASNEFANYVVQHVIKCGDALAVYRDIIIEQCLLQNLLSMSQEKYASHVVEVAFECAPYR 406
Query: 937 SPEERQLLINE-MLGSTDEN-EPLQAMMKDPFGNYVVQKVLETC------DDQS------ 982
E I E + D N + L ++ +GNYVVQ++++TC DQ
Sbjct: 407 LVAEMMNEIFEGYIPHPDTNRDALDILLFHQYGNYVVQQMIQTCVLGQNARDQKQSEMYG 466
Query: 983 --LELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
LE I R+ + + L++++ GK I+ ++ +
Sbjct: 467 MWLEKIHGRVMRNAHRLERFSSGKKIIEALQSM 499
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 55/270 (20%), Positives = 115/270 (42%)
Query: 755 GTESQRAQLASQLTGHVL-RLSLQMYGCRVIQKALEVVHV-DQQTQMVAEL--DGSV-MK 809
G S L L L + GCR +Q+ + D ++ +L D ++ +
Sbjct: 129 GNVSDSVTLQDVLANDALVEFATDKNGCRFLQEHYPTENDNDVHQKLFRKLVEDRAIFLS 188
Query: 810 CVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQ 869
+ GN +Q+ +EC + + + + L CRVIQ ++ D
Sbjct: 189 LCSNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLAT 248
Query: 870 QIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ--IVRMSQQKFASN 927
++ ++ H+ L+ DQ GN+VIQ +++ T ++ A ++ + Q K+
Sbjct: 249 RLSLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFFADDDNLIHVCQDKYGCR 308
Query: 928 VVEKCLTFGSPEE-------RQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDD 980
V++ + S ++ R +L+ ++ N + + F NYVVQ V++ D
Sbjct: 309 VIQSTVETLSTDQYAQCYQHRVILLRSLMAGVTRN--CTQLASNEFANYVVQHVIKCGDA 366
Query: 981 QSL--ELILSRIRV-HLNVLKKYTYGKHIV 1007
++ ++I+ + + +L + + Y H+V
Sbjct: 367 LAVYRDIIIEQCLLQNLLSMSQEKYASHVV 396
>CGD|CAL0000028 [details] [associations]
symbol:MPT5 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:1900153 "positive
regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 CGD:CAL0000028
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AACQ01000010 EMBL:AACQ01000009 eggNOG:COG5099
RefSeq:XP_722196.1 RefSeq:XP_722310.1 ProteinModelPortal:Q5AKY7
GeneID:3636032 GeneID:3636205 KEGG:cal:CaO19.12458
KEGG:cal:CaO19.4991 Uniprot:Q5AKY7
Length = 938
Score = 319 (117.4 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 87/303 (28%), Positives = 152/303 (50%)
Query: 692 LSDIVDHVVEFSTDQYGSRFIQQKL-EAATAEEKTR------IFPEIIPHARTLMTDVFG 744
L+ + +++ + DQYG RF+Q+K+ E+ + R IF +I H L+ D FG
Sbjct: 279 LTQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFG 338
Query: 745 NYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-L 803
NY+IQK + ES L L ++ ++S+ +G R +QK ++ ++ Q ++ + L
Sbjct: 339 NYLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIKGL 398
Query: 804 DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHC 863
+++ + D NGNHVIQK + QFI S + ++TH +GC V+Q+ L H
Sbjct: 399 KPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNH- 457
Query: 864 DDANTQQI--IMDEIM--QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAG-QIVR 918
QQ+ I+ ++ L DQ+GNYV+Q+++ + I
Sbjct: 458 --VTLQQLGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISN 515
Query: 919 MSQQKFASNVVEKCLT--FGSPEERQLLIN---EMLGSTDENEPLQAMMKDPFGNYVVQK 973
+ KF+SNVVEK L + + N E++ ++ L ++ DP+GNYV+Q
Sbjct: 516 LCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFELIYIILVSD-LNVLINDPYGNYVIQT 574
Query: 974 VLE 976
+++
Sbjct: 575 MID 577
Score = 198 (74.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 51/256 (19%), Positives = 122/256 (47%)
Query: 765 SQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELD-------GSVMKCVHDQNGN 817
+QL +L+L+ YGCR +QK ++ V +A + V + + D GN
Sbjct: 280 TQLKSEILKLAKDQYGCRFLQKKIDESLVPNYQVRLANFEIIFNQIYSHVYELIVDPFGN 339
Query: 818 HVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIM 877
++IQK I + + ++ + +S + +G R +Q++++ ++++ +++ +
Sbjct: 340 YLIQKLIVYCNESNLDLLMEILQYNLFQISINQHGTRALQKIIDSLNNSHQLGLLIKGLK 399
Query: 878 QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGS 937
++ L +D GN+VIQ +L +P + + + + ++ K V++KCL +
Sbjct: 400 PYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIIDDLYIVATHKHGCCVLQKCLNHVT 459
Query: 938 PEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCD-DQSLELILSRIRVHLNV 996
++ + E + + E + ++ D FGNYV+Q ++ D + ++ + + ++
Sbjct: 460 LQQ----LGEFSRAILKFENFKLLINDQFGNYVLQYLISINSLDINFQIFQNFVNFGISN 515
Query: 997 LKKYTYGKHIVSRIEK 1012
L + ++V + K
Sbjct: 516 LCNLKFSSNVVEKFLK 531
Score = 40 (19.1 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 4 GSNIEMLPNLEDGLRGQNGNLSLEDSL 30
G N + D L+GQ+ +L+ + L
Sbjct: 47 GGNFQQQQQQGDSLQGQSSSLNQQSGL 73
>CGD|CAL0004399 [details] [associations]
symbol:orf19.5381 species:5476 "Candida albicans" [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001308 "negative
regulation of chromatin silencing involved in replicative cell
aging" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
CGD:CAL0004399 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AACQ01000050 RefSeq:XP_717758.1
ProteinModelPortal:Q5A835 GeneID:3640530 KEGG:cal:CaO19.5381
Uniprot:Q5A835
Length = 783
Score = 271 (100.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 92/351 (26%), Positives = 168/351 (47%)
Query: 674 LSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIP 733
L L++E TN T F ++I VE D +G+ IQ+ E++ + +
Sbjct: 461 LQRELINE--TNATLIF--NEIYFKAVELMIDPFGNYLIQKLFTMINLEQRLVLINQCSN 516
Query: 734 HARTLMTDVFGNYVIQKFFEHGTESQRAQLASQ-LTGHVLRLSLQMYGCRVIQKALEVVH 792
+ D G +QK + ++ ++ ++ L +++ LS + G V+QK L +
Sbjct: 517 ELFRIALDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHVVQKILTKFN 576
Query: 793 VDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYG 852
+ ++ + S D N + Q++ QFI ++ ++ H +G
Sbjct: 577 T-----ISSDSNSS------DSNRDGAQH-------QNQNQFIFDIIQANLLYIACHRHG 618
Query: 853 CRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH---GKPHERTT-- 907
C V+QR L++ + QQ+ EI +H L+ D YGNYV+Q+VL G + T
Sbjct: 619 CCVLQRCLDYGNKQQCQQL-SQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQ 677
Query: 908 ----VITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMK 963
+I ++ +++S KF SNV+EKCL S + LI+ ++ D + ++
Sbjct: 678 VIDIIIQEIKSNFIQLSLHKFGSNVIEKCLKISSISKD--LIDNLI-VLDHGQAFNQLLN 734
Query: 964 DPFGNYVVQKVLETCDDQSLELILSRIRVHL--NVLKKYTYGKHIVSRIEK 1012
DPFGNYV+Q L+ + + E LS+I + L N+ K +G+ I+++I++
Sbjct: 735 DPFGNYVLQTSLDVANLEQFEQ-LSKILLPLLPNI-KSTPHGRRILNKIQQ 783
Score = 210 (79.0 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 47/135 (34%), Positives = 76/135 (56%)
Query: 691 ELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQK 750
+L D ++ DQ+G RF+Q++L T T IF EI A LM D FGNY+IQK
Sbjct: 440 KLQDFTGSILTLCKDQHGCRFLQRELINET--NATLIFNEIYFKAVELMIDPFGNYLIQK 497
Query: 751 FFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMK 809
F QR L +Q + + R++L +G R +QK ++V+ +++ +++ L +++
Sbjct: 498 LFTMINLEQRLVLINQCSNELFRIALDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVV 557
Query: 810 CVHDQNGNHVIQKCI 824
D NGNHV+QK +
Sbjct: 558 LSRDLNGNHVVQKIL 572
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/267 (20%), Positives = 121/267 (45%)
Query: 757 ESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNG 816
E+ + +++ + L + +G +IQK +++++Q+ ++ + + + D +G
Sbjct: 468 ETNATLIFNEIYFKAVELMIDPFGNYLIQKLFTMINLEQRLVLINQCSNELFRIALDPHG 527
Query: 817 NHVIQKCIECIP-QDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDE 875
+QK I+ I + I+ I + Y +V LS G V+Q++L + ++ D
Sbjct: 528 TRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHVVQKILTKFNTISSDSNSSDS 587
Query: 876 IMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTF 935
AQ Q N I +++ ++ ++ + V+++CL +
Sbjct: 588 NRDG----AQHQNQNQFIFDIIQ---------------ANLLYIACHRHGCCVLQRCLDY 628
Query: 936 GSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVL---------ETCDDQSLELI 986
G+ ++ Q L E+ T + + DP+GNYVVQ VL + D+Q +++I
Sbjct: 629 GNKQQCQQLSQEIAKHTIK------LSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDII 682
Query: 987 LSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
+ I+ + L + +G +++ + K+
Sbjct: 683 IQEIKSNFIQLSLHKFGSNVIEKCLKI 709
Score = 156 (60.0 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 59/258 (22%), Positives = 120/258 (46%)
Query: 733 PHARTL--MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEV 790
PH R M +V + +K E + A+L TG +L L +GCR +Q+ E+
Sbjct: 411 PHYRNNNGMMNVHRKNLRRK--EDSAKYSDAKL-QDFTGSILTLCKDQHGCRFLQR--EL 465
Query: 791 VHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHP 850
++ T + E+ ++ + D GN++IQK I ++ +I+ ++ ++ P
Sbjct: 466 INETNATLIFNEIYFKAVELMIDPFGNYLIQKLFTMINLEQRLVLINQCSNELFRIALDP 525
Query: 851 YGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKP--HERTTV 908
+G R +Q++++ + +II + ++ L++D GN+V+Q +L + +
Sbjct: 526 HGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHVVQKILTKFNTISSDSNSS 585
Query: 909 ITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEML---GSTDENEPL-QAMMK- 963
+ G +Q +F ++++ L + + + + G+ + + L Q + K
Sbjct: 586 DSNRDGA-QHQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLDYGNKQQCQQLSQEIAKH 644
Query: 964 ------DPFGNYVVQKVL 975
DP+GNYVVQ VL
Sbjct: 645 TIKLSLDPYGNYVVQYVL 662
>TAIR|locus:2167771 [details] [associations]
symbol:PUM13 "pumilio 13" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AB008267 eggNOG:COG5099 IPI:IPI00522991 RefSeq:NP_199123.1
UniGene:At.55330 ProteinModelPortal:Q9FMH4 SMR:Q9FMH4 PaxDb:Q9FMH4
PRIDE:Q9FMH4 EnsemblPlants:AT5G43090.1 GeneID:834325
KEGG:ath:AT5G43090 TAIR:At5g43090 HOGENOM:HOG000136003
InParanoid:Q9FMH4 OMA:NGERNIW PhylomeDB:Q9FMH4
ProtClustDB:CLSN2686651 Genevestigator:Q9FMH4 Uniprot:Q9FMH4
Length = 527
Score = 249 (92.7 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 67/316 (21%), Positives = 144/316 (45%)
Query: 703 STDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQ 762
+TD+ S+ +++ + T E IF +I LM D FGN V++ + Q
Sbjct: 217 ATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIIL 276
Query: 763 LASQLTGHV---LRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDG--SV-MKCVHDQNG 816
+ +T H+ + + G IQ L +H Q+ +D SV ++ + N
Sbjct: 277 IVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNA 336
Query: 817 NHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVL--EHCDDANTQQIIMD 874
+VI C + + ++ ++ GC ++Q+ E + +Q ++
Sbjct: 337 KYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLIS 396
Query: 875 EIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLT 934
E+++H L + +GNYV+Q+V+E HE ++ +L +++ K+ S+VV+K L
Sbjct: 397 EVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLK 456
Query: 935 FGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVHL 994
+ + ++++ + G + ++ DPFGNYV+Q + +++ I ++
Sbjct: 457 LRGIDSKLIVVDLLRG-------IDTLLLDPFGNYVIQTAWFVSKEDVRQMLRYYIERNI 509
Query: 995 NVLKKYTYGKHIVSRI 1010
+++ +G I+ ++
Sbjct: 510 RLMRCNKFGNKILEKL 525
Score = 123 (48.4 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 66/288 (22%), Positives = 125/288 (43%)
Query: 740 TDVFGNYVIQKFFEH-GTESQRAQLASQL-TGHVLRLSLQMYGCRVIQKALE-VVHVDQQ 796
T++FG V + + G + Q AS + G S+ RV K LE + V +
Sbjct: 178 TNIFGYGVNNSWRSNEGCTYNQDQAASSMENGRGSYFSIATD--RVWSKELEKTIFVGTK 235
Query: 797 TQMVAELDGSVMK-C--VHDQNGNHVIQKCI-ECIPQDRIQFI--ISSFYGQVVALSTHP 850
+ DG ++ C + D GN V++ I +C + I + ++ + V + +P
Sbjct: 236 ETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNP 295
Query: 851 YGCRVIQRVLEHCDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTV 908
G IQ +L + QI IMD I L ++ YVI + +
Sbjct: 296 IGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRL 355
Query: 909 ITQLAGQIVRMSQQKFASNVVEKCLT---FGSPEERQLLINEMLGSTDENEPLQAMMKDP 965
+ ++ +++ + ++++C + E RQ LI+E++ E + +
Sbjct: 356 LEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVI------EHALKLCLNC 409
Query: 966 FGNYVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
GNYVVQ V+E + +L+++++ + L + YG H+V ++ KL
Sbjct: 410 HGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKL 457
Score = 48 (22.0 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 120 HENINPRLPPPLVSKEDWRVAQRFQGGGSSLGD 152
H+N NP LP + Q F GGG S GD
Sbjct: 81 HQNGNPILPAHQYN-------QVFNGGGGSYGD 106
Score = 43 (20.2 bits), Expect = 7.5e-18, Sum P(3) = 7.5e-18
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 381 QSQLQLNPD--NQSDFLYDTSNGHNQSMKQQFMD 412
Q +L D NQS + YDT G N + F++
Sbjct: 131 QQRLSYQNDYVNQS-YRYDTIGGGNGMLNNSFLN 163
Score = 40 (19.1 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 439 NASAINSNGQVNILKRTSSPNLYSKMNST 467
N +N+NG+ NI + N+ + +S+
Sbjct: 3 NKFYVNTNGERNIWSTAAEENMTTAASSS 31
>WB|WBGene00004243 [details] [associations]
symbol:puf-7 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IGI]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0035188 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048477 GO:GO:0003723
GO:GO:0000910 GO:GO:0007281 eggNOG:COG5099
GeneTree:ENSGT00390000017241 EMBL:FO080145 HOGENOM:HOG000113900
PIR:T32538 RefSeq:NP_500820.1 PDB:3V71 PDBsum:3V71
ProteinModelPortal:O44169 SMR:O44169 STRING:O44169
EnsemblMetazoa:B0273.2.1 EnsemblMetazoa:B0273.2.2 GeneID:177332
KEGG:cel:CELE_B0273.2 UCSC:B0273.2.1 CTD:177332 WormBase:B0273.2
InParanoid:O44169 OMA:HAMQRIR NextBio:896304 Uniprot:O44169
Length = 485
Score = 247 (92.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 77/283 (27%), Positives = 143/283 (50%)
Query: 692 LSDIV--DHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVF----GN 745
L D++ +++F+ D G +F++ + ++ + E + TL + GN
Sbjct: 84 LEDVLLNGQLIDFAIDPSGVKFLEANYPLDSEDQIRKAVFEKFTESTTLFVGLCHSRNGN 143
Query: 746 YVIQKFFEHGTESQRAQLASQLT-GHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAEL- 803
+++QK E T +++ +L Q+ G +L + + CRV+Q AL+ Q++ EL
Sbjct: 144 FIVQKLVELATPAEQRELLRQMIDGGLLAMCKDKFACRVVQLALQKFDHSNVFQLIQELS 203
Query: 804 --DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIIS--SFYGQVVALSTHPYGCRVIQRV 859
D + M C DQ HVIQ+ ++ +P D F + S ++A+ YGCR++Q+V
Sbjct: 204 TFDLAAM-CT-DQISIHVIQRVVKQLPVDMWTFFVHFLSSGDSLMAVCQDKYGCRLVQQV 261
Query: 860 LEH--------CDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHE--RTT 907
++ C Q + +M I+++ L+ +++ NYVIQ+V++ E R T
Sbjct: 262 IDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSNEFANYVIQYVIKSSGIMEMYRDT 321
Query: 908 VITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEML 949
+I + L ++ MSQ K+AS+V+E F P L++EM+
Sbjct: 322 IIDKCLLRNLLSMSQDKYASHVIEGAFLFAPPA----LLHEMM 360
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 73/281 (25%), Positives = 125/281 (44%)
Query: 711 FIQQKL-EAATAEEKTRIFPEIIPHARTLMT-DVFGNYVIQKFFEHGTESQRAQLASQL- 767
FI QKL E AT E+ + ++I M D F V+Q + S QL +L
Sbjct: 144 FIVQKLVELATPAEQRELLRQMIDGGLLAMCKDKFACRVVQLALQKFDHSNVFQLIQELS 203
Query: 768 TGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECI 827
T + + VIQ+ ++ + VD T V L +G+ ++ C
Sbjct: 204 TFDLAAMCTDQISIHVIQRVVKQLPVDMWTFFVHFLS----------SGDSLMAVC---- 249
Query: 828 PQDRIQFIISSFYGQVV-ALSTHP-YGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
QD+ + QV+ L+ +P C + L H +M I+++ L+
Sbjct: 250 -QDKYGCRLVQ---QVIDRLAENPKLPCFKFRIQLLHS--------LMTCIVRNCYRLSS 297
Query: 886 DQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+++ NYVIQ+V++ E R T+I + L ++ MSQ K+AS+V+E F P
Sbjct: 298 NEFANYVIQYVIKSSGIMEMYRDTIIDKCLLRNLLSMSQDKYASHVIEGAFLFAPPALLH 357
Query: 943 LLINEMLGS----TDEN-EPLQAMMKDPFGNYVVQKVLETC 978
++ E+ + N + L ++ +GNYVVQ+++ C
Sbjct: 358 EMMEEIFSGYVKDVESNRDALDILLFHQYGNYVVQQMISIC 398
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/259 (20%), Positives = 117/259 (45%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKCV---HDQNGNHVIQK 822
L G ++ ++ G + ++ + DQ + V E S V H +NGN ++QK
Sbjct: 89 LNGQLIDFAIDPSGVKFLEANYPLDSEDQIRKAVFEKFTESTTLFVGLCHSRNGNFIVQK 148
Query: 823 CIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVC 881
+E P ++ + + G ++A+ + CRV+Q L+ D +N Q+I + +
Sbjct: 149 LVELATPAEQRELLRQMIDGGLLAMCKDKFACRVVQLALQKFDHSNVFQLIQELSTFDLA 208
Query: 882 NLAQDQYGNYVIQHVLEHGKPHERTTVITQL--AGQ-IVRMSQQKFASNVVEKCLT--FG 936
+ DQ +VIQ V++ P + T +G ++ + Q K+ +V++ +
Sbjct: 209 AMCTDQISIHVIQRVVKQ-LPVDMWTFFVHFLSSGDSLMAVCQDKYGCRLVQQVIDRLAE 267
Query: 937 SPEE-----RQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSL--ELILSR 989
+P+ R L++ ++ N + + F NYV+Q V+++ + + I+ +
Sbjct: 268 NPKLPCFKFRIQLLHSLMTCIVRN--CYRLSSNEFANYVIQYVIKSSGIMEMYRDTIIDK 325
Query: 990 IRV-HLNVLKKYTYGKHIV 1007
+ +L + + Y H++
Sbjct: 326 CLLRNLLSMSQDKYASHVI 344
>WB|WBGene00004242 [details] [associations]
symbol:puf-6 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0035188 GO:GO:0005737 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0017148 GO:GO:0048477
GO:GO:0000910 GO:GO:0003730 GO:GO:0007281 GO:GO:0006402
eggNOG:COG5099 GeneTree:ENSGT00390000017241 EMBL:Z81507 PIR:T21080
RefSeq:NP_496773.1 ProteinModelPortal:O01322 SMR:O01322
STRING:O01322 EnsemblMetazoa:F18A11.1.1 EnsemblMetazoa:F18A11.1.2
GeneID:174947 KEGG:cel:CELE_F18A11.1 UCSC:F18A11.1.1 CTD:174947
WormBase:F18A11.1 HOGENOM:HOG000113900 InParanoid:O01322
OMA:RDIANHI NextBio:886152 Uniprot:O01322
Length = 485
Score = 245 (91.3 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 75/274 (27%), Positives = 140/274 (51%)
Query: 699 VVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVF----GNYVIQKFFEH 754
+++F+ D G +F++ + ++ + E + + TL + GN+++QK E
Sbjct: 93 LIDFAIDPSGVKFLEANYPLDSEDQIRKAVFEKLTESTTLFVGLCHSRNGNFIVQKLVEL 152
Query: 755 GTESQRAQLASQLT-GHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAEL---DGSVMKC 810
T +++ +L Q+ G +L + + CRV+Q AL+ Q++ EL D + M C
Sbjct: 153 ATPAEQRELLRQMIDGGLLVMCKDKFACRVVQLALQKFDHSNVFQLIQELSTFDLAAM-C 211
Query: 811 VHDQNGNHVIQKCIECIPQDRIQFIIS--SFYGQVVALSTHPYGCRVIQRVLEH------ 862
DQ HVIQ+ ++ +P D F + S ++A+ YGCR++Q+V++
Sbjct: 212 T-DQISIHVIQRVVKQLPVDMWTFFVHFLSSGDSLMAVCQDKYGCRLVQQVIDRLAENPK 270
Query: 863 --CDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQ 915
C Q + +M I+++ L+ +++ NYVIQ+V++ E R T+I + L
Sbjct: 271 LPCFKFRIQLLHSLMTCIVRNCYRLSSNEFANYVIQYVIKSSGIMEMYRDTIIDKCLLRN 330
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEML 949
++ MSQ K+AS+V+E F P L++EM+
Sbjct: 331 LLSMSQDKYASHVIEGAFLFAPPA----LLHEMM 360
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 73/281 (25%), Positives = 125/281 (44%)
Query: 711 FIQQKL-EAATAEEKTRIFPEIIPHARTLMT-DVFGNYVIQKFFEHGTESQRAQLASQL- 767
FI QKL E AT E+ + ++I +M D F V+Q + S QL +L
Sbjct: 144 FIVQKLVELATPAEQRELLRQMIDGGLLVMCKDKFACRVVQLALQKFDHSNVFQLIQELS 203
Query: 768 TGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECI 827
T + + VIQ+ ++ + VD T V L +G+ ++ C
Sbjct: 204 TFDLAAMCTDQISIHVIQRVVKQLPVDMWTFFVHFLS----------SGDSLMAVC---- 249
Query: 828 PQDRIQFIISSFYGQVV-ALSTHP-YGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
QD+ + QV+ L+ +P C + L H +M I+++ L+
Sbjct: 250 -QDKYGCRLVQ---QVIDRLAENPKLPCFKFRIQLLHS--------LMTCIVRNCYRLSS 297
Query: 886 DQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
+++ NYVIQ+V++ E R T+I + L ++ MSQ K+AS+V+E F P
Sbjct: 298 NEFANYVIQYVIKSSGIMEMYRDTIIDKCLLRNLLSMSQDKYASHVIEGAFLFAPPALLH 357
Query: 943 LLINEMLGS--TD---ENEPLQAMMKDPFGNYVVQKVLETC 978
++ E+ D + L ++ +GNYVVQ+++ C
Sbjct: 358 EMMEEIFSGYVKDVELNRDALDILLFHQYGNYVVQQMISIC 398
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 54/259 (20%), Positives = 117/259 (45%)
Query: 767 LTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKCV---HDQNGNHVIQK 822
L G ++ ++ G + ++ + DQ + V E L S V H +NGN ++QK
Sbjct: 89 LNGLLIDFAIDPSGVKFLEANYPLDSEDQIRKAVFEKLTESTTLFVGLCHSRNGNFIVQK 148
Query: 823 CIE-CIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVC 881
+E P ++ + + G ++ + + CRV+Q L+ D +N Q+I + +
Sbjct: 149 LVELATPAEQRELLRQMIDGGLLVMCKDKFACRVVQLALQKFDHSNVFQLIQELSTFDLA 208
Query: 882 NLAQDQYGNYVIQHVLEHGKPHERTTVITQL--AGQ-IVRMSQQKFASNVVEKCLT--FG 936
+ DQ +VIQ V++ P + T +G ++ + Q K+ +V++ +
Sbjct: 209 AMCTDQISIHVIQRVVKQ-LPVDMWTFFVHFLSSGDSLMAVCQDKYGCRLVQQVIDRLAE 267
Query: 937 SPEE-----RQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSL--ELILSR 989
+P+ R L++ ++ N + + F NYV+Q V+++ + + I+ +
Sbjct: 268 NPKLPCFKFRIQLLHSLMTCIVRN--CYRLSSNEFANYVIQYVIKSSGIMEMYRDTIIDK 325
Query: 990 IRV-HLNVLKKYTYGKHIV 1007
+ +L + + Y H++
Sbjct: 326 CLLRNLLSMSQDKYASHVI 344
>WB|WBGene00001401 [details] [associations]
symbol:fbf-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0051729 "germline cell cycle switching, mitotic to meiotic cell
cycle" evidence=IGI;IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0017148 "negative regulation of
translation" evidence=IGI] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0010608 "posttranscriptional regulation of gene expression"
evidence=IGI] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0009792
GO:GO:0006898 GO:GO:0048471 GO:GO:0030154 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0017148 GO:GO:0040011
GO:GO:0007283 GO:GO:0051729 GO:GO:0003730 GO:GO:0007548
GO:GO:0040027 GO:GO:0040022 GO:GO:0043073 EMBL:FO081202
RefSeq:NP_495216.1 ProteinModelPortal:Q9N5M6 SMR:Q9N5M6
IntAct:Q9N5M6 STRING:Q9N5M6 EnsemblMetazoa:H12I13.4 GeneID:174016
KEGG:cel:CELE_H12I13.4 UCSC:H12I13.4 CTD:174016 WormBase:H12I13.4
eggNOG:COG5099 GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078
InParanoid:Q9N5M6 OMA:TADSINV NextBio:882139 Uniprot:Q9N5M6
Length = 614
Score = 226 (84.6 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 67/254 (26%), Positives = 130/254 (51%)
Query: 679 LDEFKTNKTRSFELSDIVDH--VVEFSTDQYGSRFIQQKLEAA-TAEEKTRIFPEIIPHA 735
LD ++R LS+++D +++F+ D+ G +F+++ ++ + T+ +K ++F ++I
Sbjct: 171 LDSNGEMRSR-LSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRK 229
Query: 736 RT---LMTDVFGNYVIQKF-------FEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQ 785
L T++FGNY +Q+ ++ ++ +L + ++ + + L + CRVIQ
Sbjct: 230 DDFLKLSTNIFGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQ 289
Query: 786 KALEVVHVDQQTQMVAEL--DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYG-- 841
+L+ + + ++V L D ++ DQN NHVIQK + IP +FI+ F
Sbjct: 290 SSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVD-FVATP 348
Query: 842 -QVVALSTHPYGCRVIQRVLEH--CDDANT------QQI---IMDEIMQHVCN----LAQ 885
+ + YGCRV+Q ++E D N Q + + +M V N LA
Sbjct: 349 EHLRQICFDKYGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELAT 408
Query: 886 DQYGNYVIQHVLEH 899
++Y NY+IQH++ +
Sbjct: 409 NEYANYIIQHIVSN 422
Score = 50 (22.7 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 378 SHVQSQL---QLNPDNQSDFL-YDTS--NGHNQSMKQQFMDKSTADNLAFSTHYIDFTRK 431
S +QS +L PD+ S + Y ++ + +N S K + S A S + FTR
Sbjct: 106 SFIQSDTDSSRLEPDDFSQNVRYCSTEIDRNNSSSKNDHLKYSRP---ALSRNSRSFTRS 162
Query: 432 NGIVPNLNASAINSNGQV 449
N ++P + ++SNG++
Sbjct: 163 NNVLPTWS---LDSNGEM 177
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 983 LELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIGLSSS 1026
L+ + SR+ + L +++ GK ++ + L +T GL SS
Sbjct: 533 LKKLHSRVTKERHRLSRFSSGKKMIETLAHLRST-HPIYGLQSS 575
>UNIPROTKB|Q9N5M6 [details] [associations]
symbol:fbf-1 "Fem-3 mRNA-binding factor 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0009792
GO:GO:0006898 GO:GO:0048471 GO:GO:0030154 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0017148 GO:GO:0040011
GO:GO:0007283 GO:GO:0051729 GO:GO:0003730 GO:GO:0007548
GO:GO:0040027 GO:GO:0040022 GO:GO:0043073 EMBL:FO081202
RefSeq:NP_495216.1 ProteinModelPortal:Q9N5M6 SMR:Q9N5M6
IntAct:Q9N5M6 STRING:Q9N5M6 EnsemblMetazoa:H12I13.4 GeneID:174016
KEGG:cel:CELE_H12I13.4 UCSC:H12I13.4 CTD:174016 WormBase:H12I13.4
eggNOG:COG5099 GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078
InParanoid:Q9N5M6 OMA:TADSINV NextBio:882139 Uniprot:Q9N5M6
Length = 614
Score = 226 (84.6 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 67/254 (26%), Positives = 130/254 (51%)
Query: 679 LDEFKTNKTRSFELSDIVDH--VVEFSTDQYGSRFIQQKLEAA-TAEEKTRIFPEIIPHA 735
LD ++R LS+++D +++F+ D+ G +F+++ ++ + T+ +K ++F ++I
Sbjct: 171 LDSNGEMRSR-LSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRK 229
Query: 736 RT---LMTDVFGNYVIQKF-------FEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQ 785
L T++FGNY +Q+ ++ ++ +L + ++ + + L + CRVIQ
Sbjct: 230 DDFLKLSTNIFGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQ 289
Query: 786 KALEVVHVDQQTQMVAEL--DGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYG-- 841
+L+ + + ++V L D ++ DQN NHVIQK + IP +FI+ F
Sbjct: 290 SSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVD-FVATP 348
Query: 842 -QVVALSTHPYGCRVIQRVLEH--CDDANT------QQI---IMDEIMQHVCN----LAQ 885
+ + YGCRV+Q ++E D N Q + + +M V N LA
Sbjct: 349 EHLRQICFDKYGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELAT 408
Query: 886 DQYGNYVIQHVLEH 899
++Y NY+IQH++ +
Sbjct: 409 NEYANYIIQHIVSN 422
Score = 50 (22.7 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 378 SHVQSQL---QLNPDNQSDFL-YDTS--NGHNQSMKQQFMDKSTADNLAFSTHYIDFTRK 431
S +QS +L PD+ S + Y ++ + +N S K + S A S + FTR
Sbjct: 106 SFIQSDTDSSRLEPDDFSQNVRYCSTEIDRNNSSSKNDHLKYSRP---ALSRNSRSFTRS 162
Query: 432 NGIVPNLNASAINSNGQV 449
N ++P + ++SNG++
Sbjct: 163 NNVLPTWS---LDSNGEM 177
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 983 LELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIGLSSS 1026
L+ + SR+ + L +++ GK ++ + L +T GL SS
Sbjct: 533 LKKLHSRVTKERHRLSRFSSGKKMIETLAHLRST-HPIYGLQSS 575
>WB|WBGene00004241 [details] [associations]
symbol:puf-5 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] InterPro:IPR001313 InterPro:IPR016024
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0035188
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048477
GO:GO:0003723 GO:GO:0000910 EMBL:Z49967 GO:GO:0043186
eggNOG:COG5099 GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078
PIR:T22634 RefSeq:NP_495814.1 ProteinModelPortal:Q20757 SMR:Q20757
STRING:Q20757 PaxDb:Q20757 EnsemblMetazoa:F54C9.8 GeneID:174373
KEGG:cel:CELE_F54C9.8 UCSC:F54C9.8 CTD:174373 WormBase:F54C9.8
InParanoid:Q20757 OMA:MISICIS NextBio:883756 Uniprot:Q20757
Length = 553
Score = 220 (82.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 61/233 (26%), Positives = 116/233 (49%)
Query: 771 VLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDG-SVMKCVHDQNGNHVIQKCIECIPQ 829
++ + L + CRV+Q +++ V ++V ++ + DQ HV+QK ++ +P
Sbjct: 230 LIEMCLDKFACRVVQMSIQKFDVSIAMKLVEKISSLDFLPLCTDQCAIHVLQKVVKLLPI 289
Query: 830 DRIQFIISSFY--GQVVALSTHPYGCRVIQRVLE--------HCDDANTQQI--IMDEIM 877
F + ++ + YGCR++Q+ ++ HC + Q + +M +
Sbjct: 290 SAWSFFVKFLCRDDNLMTVCQDKYGCRLVQQTIDKLSDNPKLHCFNTRLQLLHGLMTSVA 349
Query: 878 QHVCNLAQDQYGNYVIQHVLEHGKPHE--RTTVITQ-LAGQIVRMSQQKFASNVVEKCLT 934
++ L+ +++ NYV+Q+V++ E R T+I + L I+ MSQ K+AS+VVE
Sbjct: 350 RNCFRLSSNEFANYVVQYVIKSSGVMEMYRDTIIEKCLLRNILSMSQDKYASHVVEGAFL 409
Query: 935 FGSPEERQLLINEML-----GSTDENEP----LQAMMKDPFGNYVVQKVLETC 978
F P LL++EM+ G + E L ++ +GNYVVQ+++ C
Sbjct: 410 FAPP----LLLSEMMDEIFDGYVKDQETNRDALDILLFHQYGNYVVQQMISIC 458
Score = 209 (78.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 55/240 (22%), Positives = 119/240 (49%)
Query: 692 LSDIVDH--VVEFSTDQYGSRFIQQKL-EAATAEEKTRIFPEIIPHAR---TLMTDVFGN 745
L D+V + +++F+ D+ G +F+++ E E +F ++ +L GN
Sbjct: 144 LQDVVSNGSLIDFAMDRTGVKFLERHFPEDHDNEMHFVLFDKLTEQGAVFTSLCRSAAGN 203
Query: 746 YVIQKFFEHGTESQRAQLASQLTGH-VLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELD 804
++IQKF EH T ++ +L ++ + ++ + L + CRV+Q +++ V ++V ++
Sbjct: 204 FIIQKFVEHATLDEQERLVRKMCDNGLIEMCLDKFACRVVQMSIQKFDVSIAMKLVEKIS 263
Query: 805 G-SVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFY--GQVVALSTHPYGCRVIQRVLE 861
+ DQ HV+QK ++ +P F + ++ + YGCR++Q+ ++
Sbjct: 264 SLDFLPLCTDQCAIHVLQKVVKLLPISAWSFFVKFLCRDDNLMTVCQDKYGCRLVQQTID 323
Query: 862 --------HCDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHE--RTTVI 909
HC + Q + +M + ++ L+ +++ NYV+Q+V++ E R T+I
Sbjct: 324 KLSDNPKLHCFNTRLQLLHGLMTSVARNCFRLSSNEFANYVVQYVIKSSGVMEMYRDTII 383
Score = 49 (22.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 986 ILSRIRVHLNVLKKYTYGKHIVSRIEKL 1013
I +R+ H L++++ GK I+ ++KL
Sbjct: 485 IKNRVNRHSGRLERFSSGKKIIESLQKL 512
>ASPGD|ASPL0000066087 [details] [associations]
symbol:AN7474 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001313 InterPro:IPR012677
InterPro:IPR016024 Pfam:PF00076 Pfam:PF00806 PROSITE:PS50102
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SMART:SM00360
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG5099 OrthoDB:EOG4MWCFG RefSeq:XP_680743.1
ProteinModelPortal:Q5AW56 EnsemblFungi:CADANIAT00000567
GeneID:2869548 KEGG:ani:AN7474.2 HOGENOM:HOG000182368 OMA:RACLESH
Uniprot:Q5AW56
Length = 1175
Score = 219 (82.2 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 92/348 (26%), Positives = 157/348 (45%)
Query: 685 NKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFG 744
N+TR F+ + D + D G+ IQ+ E A A + PEI L +D G
Sbjct: 647 NQTRMFDAPRLRD--IRKRIDN-GNCSIQEIEETAIA-----MLPEIAE----LASDYLG 694
Query: 745 NYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-L 803
N V+QK FE+ +E + ++ + H+ + + G QK ++V Q +M+ + L
Sbjct: 695 NTVVQKLFEYSSEPIKERILVPIAPHLGEIGVHKNGTWAAQKIIDVAKTPAQMRMIVDAL 754
Query: 804 DGSVMKCVHDQNGNHVIQKCIEC-IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLE- 861
+ DQ GN+V+Q C+ P + F+ + ++ ++ +G R ++ LE
Sbjct: 755 RPYTVPLFLDQYGNYVLQCCLRFGSPYN--DFVFETMLSRMWEIAQGRFGARAMRACLES 812
Query: 862 HCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGK-PHERTTVITQLAGQIVRMS 920
H + Q+++ I H LA + G ++ L+ PH RT + +L +V +
Sbjct: 813 HHATKDQQRMLAAAIALHSVQLATNANGALLLTWFLDTCTFPHRRTVLAPRLVPHLVHLC 872
Query: 921 QQKFASNVVEKCLTF-GSPEERQLLINEMLGSTDENEPLQAMMKDPF-GNYVVQKVLET- 977
K A V K + PE R +++ + S + E L+ ++ D G ++ KVL T
Sbjct: 873 THKVAYLTVLKVINQRNEPEARNIVLKALFFSPGD-EVLEKILSDQTSGATLIFKVLTTP 931
Query: 978 CDDQSLELILSRIRVHLNVLKKYTYGKHIVSRIEKLIATGERRIGLSS 1025
C D+S+ R V NV K T K S+ K + +GLSS
Sbjct: 932 CFDESM-----RPEVVKNVSKVLTKLKATPSQGYKRLMD---EVGLSS 971
>TAIR|locus:2167786 [details] [associations]
symbol:PUM14 "pumilio 14" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AB008267 eggNOG:COG5099 HOGENOM:HOG000136003
ProtClustDB:CLSN2686651 EMBL:DQ056705 IPI:IPI00526385
RefSeq:NP_199125.2 UniGene:At.55331 ProteinModelPortal:Q4PSD1
SMR:Q4PSD1 PRIDE:Q4PSD1 EnsemblPlants:AT5G43110.1 GeneID:834328
KEGG:ath:AT5G43110 TAIR:At5g43110 InParanoid:Q4PSD1
PhylomeDB:Q4PSD1 Genevestigator:Q4PSD1 Uniprot:Q4PSD1
Length = 518
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 71/322 (22%), Positives = 143/322 (44%)
Query: 702 FSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRA 761
F+ D+ S + + T E I+ +I LM D +G+ V+Q + Q
Sbjct: 208 FAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIV 267
Query: 762 QLASQLTGHVLR---LSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQ--NG 816
QL +T + + + + G IQ L ++ + Q+ +D V++ V Q
Sbjct: 268 QLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVD--VVRTVALQLSKS 325
Query: 817 NH---VIQKCIECIPQD---RIQFIISSFYGQVVALSTHPYGCRVIQRVL--EHCDDANT 868
NH VI C P ++ I+ + + +A+ H GC ++Q + +
Sbjct: 326 NHAIFVILACFRLFPLHCRLLLELIVQNCHQ--IAIDQH--GCCLLQLCFNKDRVPNLEI 381
Query: 869 QQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNV 928
+Q ++ E + + L + YGNYV+Q+++E + ++ QL G +++ K+ S+
Sbjct: 382 RQRLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHA 441
Query: 929 VEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILS 988
V+K L + R ++I ++L D ++ DPFGNYV+Q D ++
Sbjct: 442 VQKLLKLRWIDSRVIVI-DLLREID------TLLLDPFGNYVIQTAWFVSKDDVRRMLRY 494
Query: 989 RIRVHLNVLKKYTYGKHIVSRI 1010
I ++ +++ +G ++ ++
Sbjct: 495 HIERNIPMMRCNKFGNKVLEKL 516
Score = 122 (48.0 bits), Expect = 0.00077, P = 0.00077
Identities = 66/318 (20%), Positives = 135/318 (42%)
Query: 670 MEGRLSSSLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFP 729
M RL S+ T +T + ++ + E D YGS +Q + ++E+ ++
Sbjct: 214 MSERLGMSIFQG--TKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLV- 270
Query: 730 EIIPHAR----TLMTDVFGNYVIQKFF---EHGTESQRAQLASQLTGHVLRLSLQMYGCR 782
+I+ + D G IQ + Q ++ + L+LS +
Sbjct: 271 DIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSNHAIF 330
Query: 783 VIQKALEVVHVDQQTQMVAELDGSVMKCVH---DQNGNHVIQKCI--ECIPQDRI-QFII 836
VI + + +++ EL V C DQ+G ++Q C + +P I Q +I
Sbjct: 331 VILACFRLFPL--HCRLLLEL--IVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLI 386
Query: 837 SSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHV 896
+ L + YG V+Q ++E ++ ++ +++ + +LA+++YG++ +Q +
Sbjct: 387 MEAIANALRLCLNCYGNYVVQYIVE-LNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKL 445
Query: 897 LEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENE 956
L+ R VI L +I + F + V++ + R++L + + N
Sbjct: 446 LKLRWIDSRVIVI-DLLREIDTLLLDPFGNYVIQTAWFVSKDDVRRMLRYHI----ERNI 500
Query: 957 PLQAMMKDPFGNYVVQKV 974
P+ K FGN V++K+
Sbjct: 501 PMMRCNK--FGNKVLEKL 516
>TAIR|locus:2144010 [details] [associations]
symbol:PUM19 "pumilio 19" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 EMBL:AB026632
eggNOG:COG5099 HOGENOM:HOG000152208 IPI:IPI00541936
RefSeq:NP_200826.1 UniGene:At.66750 ProteinModelPortal:Q9LSS8
SMR:Q9LSS8 EnsemblPlants:AT5G60180.1 GeneID:836140
KEGG:ath:AT5G60180 TAIR:At5g60180 InParanoid:Q9LSS8 OMA:NPTETSG
PhylomeDB:Q9LSS8 Genevestigator:Q9LSS8 Uniprot:Q9LSS8
Length = 327
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 58/280 (20%), Positives = 130/280 (46%)
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTG---HVLRLSLQMYGCRVIQKALEVVHVD 794
LMTD G ++ +++ ++AS LT + + + +G R +QK L D
Sbjct: 48 LMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD-D 106
Query: 795 QQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCR 854
A + + D+ ++V + + + + + + L+ +GC
Sbjct: 107 VDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCI 166
Query: 855 VIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAG 914
+ ++ DD + +++ ++ + L+ D GN+V+QHVL + L G
Sbjct: 167 ALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYG 226
Query: 915 QIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKV 974
Q + +S +K+ S +VEK L E +++ E+LG + + L + ++ FGN+VV K
Sbjct: 227 QCIELSFKKYGSYIVEKLLEV--EESMVVVVVELLGC--DGDRLMRLARNEFGNFVVVKA 282
Query: 975 LETCDDQSLEL---ILSRIRVHLNVLKKYTYGKHIVSRIE 1011
L + ++L ++ ++ +++L++ ++G +I + ++
Sbjct: 283 LRFTKEMRMDLFWGLVQKLMPFIHLLRR-SHGNNIANILD 321
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/231 (22%), Positives = 107/231 (46%)
Query: 680 DEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIF-PEIIPHARTL 738
D+ + + S SD D+ + T ++GSR +Q+ L +++ F I+ +
Sbjct: 66 DKTELQRMASLLTSDS-DYFMSIVTTKFGSRRVQKLL--GKSDDVDAFFCAAILRRFLHI 122
Query: 739 MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGC----RVIQKALEVVHVD 794
TD + +YV + + + L ++ H L L+ +GC +I A + + D
Sbjct: 123 TTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRD 182
Query: 795 QQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCR 854
Q ++V + ++ +D +GN V+Q + I I + YGQ + LS YG
Sbjct: 183 QLLELVVS---NALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSY 239
Query: 855 VIQRVLEHCDDANTQQIIMDEIM----QHVCNLAQDQYGNYVIQHVLEHGK 901
+++++LE + +++ E++ + LA++++GN+V+ L K
Sbjct: 240 IVEKLLEV---EESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFTK 287
Score = 118 (46.6 bits), Expect = 0.00098, P = 0.00098
Identities = 39/157 (24%), Positives = 72/157 (45%)
Query: 695 IVDHVVEFSTDQYGSRFIQQKL-EAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFE 753
I+ H ++ + DQ+G + + +A + ++ ++ +A L D GN+V+Q
Sbjct: 151 ILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLT 210
Query: 754 HGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAEL---DGS-VMK 809
+A L G + LS + YG +++K LEV + +V EL DG +M+
Sbjct: 211 LYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVE--ESMVVVVVELLGCDGDRLMR 268
Query: 810 CVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVAL 846
++ GN V+ K + + R+ F+G V L
Sbjct: 269 LARNEFGNFVVVKALRFTKEMRMDL----FWGLVQKL 301
>TAIR|locus:2133534 [details] [associations]
symbol:PUM15 "pumilio 15" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AF076275 eggNOG:COG5099 EMBL:AL161512 IPI:IPI00522940
PIR:T01828 RefSeq:NP_192596.1 UniGene:At.54205
ProteinModelPortal:O81465 SMR:O81465 PRIDE:O81465
EnsemblPlants:AT4G08560.1 GeneID:826417 KEGG:ath:AT4G08560
TAIR:At4g08560 InParanoid:O81465 OMA:ENIRREM PhylomeDB:O81465
Genevestigator:O81465 InterPro:IPR010264 Pfam:PF05938
Uniprot:O81465
Length = 477
Score = 189 (71.6 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 66/283 (23%), Positives = 125/283 (44%)
Query: 705 DQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLA 764
D S +Q + E +IF +I H LM D +G+ V +K E T+ Q ++
Sbjct: 161 DGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVL 220
Query: 765 SQLTGH---VLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSV-MKCVHDQNGNHVI 820
+ +RL + +G IQ + + ++Q E V + D + VI
Sbjct: 221 DIVLEEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVI 280
Query: 821 QKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHV 880
C ++++ ++ GC ++++++ + ++ EI+
Sbjct: 281 LFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQ-SSRELRDPLIKEIISIA 339
Query: 881 CNLAQDQYG----------NYVIQHVLEHGKPHERTTVITQ-LAGQIVRMSQQKFASNVV 929
L + YG NYV+Q++L K +E T+ +++ L G V++S K+ S+VV
Sbjct: 340 VRLCGNCYGTLTPKSLLVRNYVVQYLLRL-KDYEVTSALSKHLDGNYVQLSYDKYGSHVV 398
Query: 930 EKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQ 972
+KCL R++ I E+L D +++ DP+G+YV+Q
Sbjct: 399 QKCLESREFSSRRI-IAELLSDID------SLLVDPYGDYVIQ 434
Score = 130 (50.8 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 61/279 (21%), Positives = 124/279 (44%)
Query: 741 DVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMV 800
D ++++Q G + ++ L HV L L YG +V +K +E +Q T+++
Sbjct: 161 DGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVL 220
Query: 801 ----AELDGSVMKCVHDQNGNHVIQKCIE--CIPQDRIQFIISSFYGQVVALSTHPYGCR 854
E V CVH +G H IQ + C + +F+ + Y ++ L+ R
Sbjct: 221 DIVLEEPFEFVRLCVHT-HGTHAIQGLMRSLCSEEQISRFMETLCYVSLL-LTKDVIAHR 278
Query: 855 VIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAG 914
VI ++T+ ++ + I+Q+ +A DQ G +++ ++ R +I ++
Sbjct: 279 VILFCFNQFSPSHTRYLL-EVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIIS 337
Query: 915 QIVRMSQQKFASNVVEKCLTFGSPEERQLL------INEMLGSTDENEPLQAMMKDPFGN 968
VR+ + + + K L + + LL + L + +Q + D +G+
Sbjct: 338 IAVRLCGNCYGT-LTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQ-LSYDKYGS 395
Query: 969 YVVQKVLETCDDQSLELILSRIRVHLNVLKKYTYGKHIV 1007
+VVQK LE+ + S +I + + ++ L YG +++
Sbjct: 396 HVVQKCLESREFSSRRII-AELLSDIDSLLVDPYGDYVI 433
Score = 121 (47.7 bits), Expect = 0.00087, P = 0.00087
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 680 DEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLM 739
++F + TR + L IV + + + DQ G +++ + ++ E + + EII A L
Sbjct: 285 NQFSPSHTR-YLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLC 343
Query: 740 TDVFG----------NYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALE 789
+ +G NYV+Q + L+ L G+ ++LS YG V+QK LE
Sbjct: 344 GNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE 403
Query: 790 VVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQ 821
+ +++AEL + + D G++VIQ
Sbjct: 404 SREFSSR-RIIAELLSDIDSLLVDPYGDYVIQ 434
>POMBASE|SPBP35G2.14 [details] [associations]
symbol:SPBP35G2.14 "RNA-binding protein" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR001313 InterPro:IPR012677
InterPro:IPR016024 Pfam:PF00076 Pfam:PF00806 PROSITE:PS50102
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SMART:SM00360
PomBase:SPBP35G2.14 GO:GO:0005829 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000166 EMBL:CU329671 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG5099 OrthoDB:EOG4MWCFG RefSeq:NP_595389.2
EnsemblFungi:SPBP35G2.14.1 GeneID:2541323 NextBio:20802433
Uniprot:Q9P789
Length = 1065
Score = 193 (73.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 58/277 (20%), Positives = 133/277 (48%)
Query: 710 RFIQQKLE--AATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQL 767
R ++++++ T EE I + L +D GN V+QK F++ ++ + + ++
Sbjct: 751 RQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSDHLGNTVVQKLFDYCSDPVKEMMLERI 810
Query: 768 TGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKCVHDQNGNHVIQKCIEC 826
H+ ++ + G QK ++V + Q +++A+ L + DQ GN+V+Q C++
Sbjct: 811 APHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIAKHLQPYIPLLFADQFGNYVVQTCLKF 870
Query: 827 -IPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDE-IMQHVCNLA 884
P + F+ + Q ++ YG R ++ LE D Q++++ I + +LA
Sbjct: 871 GAPMN--DFVFEAILNQFWVIAQSRYGSRAVRACLESPDVTEEQRVLVAAAITVYSVHLA 928
Query: 885 QDQYGNYVIQHVLEH-GKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEER-- 941
+ G ++ +++E+ PH + + IVR+ + A N + K ++ +
Sbjct: 929 MNGNGTLLLTYLVENMNYPHIPILLTRRFVQDIVRVCTHRLAYNSLLKIISISQGDTACG 988
Query: 942 QLLINEMLGSTDENEP--LQAMM-KDPFGNYVVQKVL 975
L+++ +L + ++ P L+ ++ + +G + K+L
Sbjct: 989 DLVVDAILDTQNDLNPNSLEKILFEQTYGPSFICKLL 1025
Score = 51 (23.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 466 STGFGGSSRSVGRQQNANISSLDFTNVSGDYSVNQKL--NSLVNHHFDTVGIGATRNLNG 523
+TG G S + ++N + + +N+S ++ N L N DT +T L+
Sbjct: 46 ATGVGSGSLNGTTNPSSNFNDSNRSNISSSLRSEMEMSNNLLKNTQNDTWT--STVGLSV 103
Query: 524 MVNQVALDFHSPP 536
NQ A++F+ P
Sbjct: 104 PENQEAMNFNEGP 116
Score = 44 (20.5 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 31/114 (27%), Positives = 45/114 (39%)
Query: 209 SDRLIGVPAAGLGSRRKSFADILQEGLDRPASLSGHLSRPASC--NAYGEIVGTGIADAH 266
S G+P A S SF+DI ASL +++ AS N G + +
Sbjct: 296 SSSFFGLPTAVSASAGTSFSDISPAA--PKASLENNIASNASSLLNPVGLDHFSAASGWS 353
Query: 267 RAGSCNGAESLEVLHSAA---ASPGLVRTKSHNRIPSHSFASAVGSSLSRSTTP 317
R + A SL S+ A G+ S +PS ++A V SS + P
Sbjct: 354 RDFNHLPASSLATARSSLTGNAKSGI--DSSVTGMPSDNYARVVESSTAEFFDP 405
Score = 44 (20.5 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 31/144 (21%), Positives = 64/144 (44%)
Query: 235 LDRPASLSGHLSRPASCNAYGE---IVGTGIADAHRAGSCNGAESLEVLHSAAASPGLVR 291
+ +P++ + L + N +G+ + TG+ G+ N + + + + S L R
Sbjct: 19 ISKPSNNNPPLDMSSLNNDFGQQLDSLATGVGSGSLNGTTNPSSNFNDSNRSNISSSL-R 77
Query: 292 TK---SHNRIPS---HSFASAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKNGA 345
++ S+N + + ++ S VG S+ PE Q + G P G A + N +
Sbjct: 78 SEMEMSNNLLKNTQNDTWTSTVGLSV-----PENQ-EAMNFNEG--PTGISSIASKNNSS 129
Query: 346 VGSNVQNDIELADIAATLSGLSLS 369
+ S +QN+ L+ ++ G + S
Sbjct: 130 ITSKLQNNSNLSVTSSANRGRTSS 153
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 21/90 (23%), Positives = 39/90 (43%)
Query: 436 PNLNASAINSNGQVNILKRTSSPNLY-SKMNSTGFGGSSRSVGRQQNAN---ISSLDFTN 491
P + + ++ S N + +SSP L S +++ S + N N S+ + N
Sbjct: 500 PYMPSPSLLSGSLANSSEHSSSPRLRGSPIHNQPVSSSKSTASLNTNNNGLRASTPEMAN 559
Query: 492 VSGDYSVNQKLNSLVNHHFDTVGIGATRNL 521
+S S ++ N+ + + TVG NL
Sbjct: 560 IS-TRSSSESNNT---NSWPTVGDATIENL 585
>TAIR|locus:2164165 [details] [associations]
symbol:PUM18 "pumilio 18" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007059 "chromosome segregation"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0007131
"reciprocal meiotic recombination" evidence=RCA] [GO:0042138
"meiotic DNA double-strand break formation" evidence=RCA]
InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 EMBL:AB019231
eggNOG:COG5099 HOGENOM:HOG000152208 EMBL:DQ056729 IPI:IPI00533181
RefSeq:NP_200819.1 UniGene:At.55636 ProteinModelPortal:Q9LVG3
SMR:Q9LVG3 EnsemblPlants:AT5G60110.1 GeneID:836133
KEGG:ath:AT5G60110 TAIR:At5g60110 InParanoid:Q9LVG3 OMA:EMISNSD
PhylomeDB:Q9LVG3 ProtClustDB:CLSN2916299 Genevestigator:Q9LVG3
Uniprot:Q9LVG3
Length = 327
Score = 181 (68.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 58/280 (20%), Positives = 128/280 (45%)
Query: 738 LMTDVFGNYVIQKFFEHGTESQRAQLASQLTG---HVLRLSLQMYGCRVIQKALEVVHVD 794
LMTD G ++ + +++ ++AS LT + + + +G R +QK L D
Sbjct: 48 LMTDGDGVSYFKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD-D 106
Query: 795 QQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCR 854
A + + D+ ++V + + + + + + L+ +GC
Sbjct: 107 VDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCI 166
Query: 855 VIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAG 914
+ ++ DD + +++ + + L+ D GN+V+QHVL + L G
Sbjct: 167 ALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYG 226
Query: 915 QIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKV 974
Q + +S +K+ S +VEK L E +++ E+LG + + L + ++ FGN+VV K
Sbjct: 227 QCIELSFKKYGSYIVEKLLEV--EESMVVVVVELLGC--DGDRLMRLARNEFGNFVVVKA 282
Query: 975 LETCDDQSLEL---ILSRIRVHLNVLKKYTYGKHIVSRIE 1011
L ++L ++ ++ + +L++ ++G +I + ++
Sbjct: 283 LRFTKMSRMDLFWGLVQKLMPFIRLLRR-SHGSNIANILD 321
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 57/260 (21%), Positives = 118/260 (45%)
Query: 680 DEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIF-PEIIPHARTL 738
D+ + + S SD D+ + T ++GSR +Q+ L +++ F I+ +
Sbjct: 66 DKTELQRMASLLTSDS-DYFMSIVTTKFGSRRVQKLL--GKSDDVDAFFCAAILRRFLHI 122
Query: 739 MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGC----RVIQKALEVVHVD 794
TD + +YV + + + L ++ H L L+ +GC +I A + + D
Sbjct: 123 TTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRD 182
Query: 795 QQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCR 854
Q ++VA + ++ +D +GN V+Q + I I + YGQ + LS YG
Sbjct: 183 QLLELVAS---NALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSY 239
Query: 855 VIQRVLEHCDDANTQQIIMDEIM----QHVCNLAQDQYGNYVIQHVLEHGKPHERTTV-- 908
+++++LE + +++ E++ + LA++++GN+V+ L K
Sbjct: 240 IVEKLLEV---EESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFTKMSRMDLFWG 296
Query: 909 ITQLAGQIVRMSQQKFASNV 928
+ Q +R+ ++ SN+
Sbjct: 297 LVQKLMPFIRLLRRSHGSNI 316
>UNIPROTKB|H0YDQ6 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 SMART:SM00025
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957 ChiTaRS:PUM1
Ensembl:ENST00000530669 Bgee:H0YDQ6 Uniprot:H0YDQ6
Length = 76
Score = 156 (60.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 32/52 (61%), Positives = 37/52 (71%)
Query: 834 FIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
FII +F GQV ALSTHPYGCRVIQR+LEHC T I+ +E+ QH L Q
Sbjct: 1 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL-EELHQHTEQLVQ 51
>TAIR|locus:2168529 [details] [associations]
symbol:PUM16 "pumilio 16" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] InterPro:IPR001313 InterPro:IPR016024
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006417
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AB016890 IPI:IPI00533013 RefSeq:NP_200736.1 UniGene:At.65693
ProteinModelPortal:Q9FIE9 PRIDE:Q9FIE9 EnsemblPlants:AT5G59280.1
GeneID:836046 KEGG:ath:AT5G59280 TAIR:At5g59280
HOGENOM:HOG000152208 OMA:CTRNIAD Genevestigator:Q9FIE9
Uniprot:Q9FIE9
Length = 332
Score = 173 (66.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 49/226 (21%), Positives = 100/226 (44%)
Query: 755 GTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHDQ 814
GT A L + + + ++ G + +QK + + D + + + D+
Sbjct: 71 GTLMWMASLMTSDCDYFMVITTNKNGSKTLQKLMGMSD-DMDVFFFEAIMRLFIHVMTDK 129
Query: 815 NGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMD 874
++V + + QD+ + + L+ YGC + ++ DD + ++D
Sbjct: 130 YASYVTIQGMRVFQQDKRELMYDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLD 189
Query: 875 EIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLT 934
+ + L+ D YGN+V+QHVL+ + +L G V +S +K+ S +VE+ L
Sbjct: 190 IVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE 249
Query: 935 FGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDD 980
G ++++ + T E L + + +GN+VV K LE ++
Sbjct: 250 AGDVPMATVVLDLLACKT---EMLIRLARSEYGNFVVCKALELTNE 292
Score = 149 (57.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 55/229 (24%), Positives = 103/229 (44%)
Query: 677 SLLDEFKTNKTRSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHAR 736
S+LD S SD D+ + +T++ GS+ +Q KL + + F I+
Sbjct: 66 SVLDTGTLMWMASLMTSDC-DYFMVITTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFI 123
Query: 737 TLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKAL----EVVH 792
+MTD + +YV + + +R + Q+ + L+ YGC + + + + +
Sbjct: 124 HVMTDKYASYVTIQGMRVFQQDKRELMYDQILRYACFLAGDQYGCIALNEIITDLDDPYY 183
Query: 793 VDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYG 852
DQ +VA + + +D GN V+Q ++ + I G V LS YG
Sbjct: 184 RDQLLDIVAN---NALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYG 240
Query: 853 CRVIQRVLEHCDDANTQQIIMDEIM---QHVCNLAQDQYGNYVIQHVLE 898
+++R+LE D +++D + + + LA+ +YGN+V+ LE
Sbjct: 241 SYIVERLLE-AGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALE 288
>UNIPROTKB|F1SJG9 [details] [associations]
symbol:LOC100152831 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR012959 InterPro:IPR016024
Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
OMA:RKDCDKE GeneTree:ENSGT00390000015757 EMBL:CU062572
Ensembl:ENSSSCT00000005761 Uniprot:F1SJG9
Length = 647
Score = 177 (67.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 75/348 (21%), Positives = 151/348 (43%)
Query: 680 DEFKTNKT---RSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHAR 736
DEFK K +S +LSD ++ + Q +++K E++ ++ ++ +
Sbjct: 110 DEFKKKKKELKQSRQLSDKANYDIVVRAKQIWE-ILRRK--DCNKEKRVKLMSDLQKLIQ 166
Query: 737 -TLMTDVFGN---YVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH 792
+ T F + VIQ + ++GTE QR Q +L G ++ LS Y +++K L +
Sbjct: 167 GKIKTIAFAHDSTRVIQCYIQYGTEEQRKQAFEELRGDLVELSKAKYSRNIVKKFLMYGN 226
Query: 793 VDQQTQMVAELDGSVMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVALSTHP 850
Q +++ G V K + + +++ + I + R + YG L
Sbjct: 227 KAQIAEIMRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQR-NMLTEELYGNTFQLYKSA 285
Query: 851 YGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVL---------EHGK 901
C + +VLE ++IMDE+ Q + +AQ + VI+H L H
Sbjct: 286 -DCPTLDKVLEV--QPEKLELIMDEMKQILTPMAQKEA---VIKHSLVHKVFLDFFTHAP 339
Query: 902 PHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAM 961
P R+ +I + ++ ++ + V CL G+P++R++++ M ++ +
Sbjct: 340 PKLRSEMIEAIREAVIYLAHTHDGARVAMHCLWHGTPKDRKVIVKTM------KTYVEKV 393
Query: 962 MKDPFGNYVVQKVLETCDDQSL--ELILSRIRVHLNVLKKYTYGKHIV 1007
+ + V+ + DD L ++I+S I L + YG+ ++
Sbjct: 394 ANGQYSHLVLLAAFDCIDDTKLVKQIIISEIINSLPNIVNDKYGRKVL 441
>POMBASE|SPBC56F2.08c [details] [associations]
symbol:SPBC56F2.08c "RNA-binding protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR001313 InterPro:IPR012677
InterPro:IPR016024 Pfam:PF00076 Pfam:PF00806 PROSITE:PS50102
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 SMART:SM00360
PomBase:SPBC56F2.08c GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000166 EMBL:CU329671
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000288 eggNOG:COG5099
OrthoDB:EOG4MWCFG PIR:T40536 RefSeq:NP_596709.1
ProteinModelPortal:O60059 EnsemblFungi:SPBC56F2.08c.1
GeneID:2540913 KEGG:spo:SPBC56F2.08c NextBio:20802028
Uniprot:O60059
Length = 661
Score = 176 (67.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 68/323 (21%), Positives = 145/323 (44%)
Query: 664 LDAGINMEGRLSSSLLDEFKTNKTRSFELS-DIVDHVVEFSTDQYGS---RFIQQKLEAA 719
L+ E R++ ++D + + +++ +I+ V + Q+ + R I++ +++
Sbjct: 119 LEVARQFEMRINLDIVDSMIASAIENNKVATEILPPVETLRSRQFEASKLREIRKNIDSG 178
Query: 720 --TAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQ 777
T EE I ++ L +D GN V+QKFFE+ ++ + + ++ ++ + +
Sbjct: 179 FYTQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIH 238
Query: 778 MYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKCVHDQNGNHVIQKCIEC-IPQDRIQFI 835
G QK ++V ++Q ++ + L DQ GN+V Q C+ P++ F
Sbjct: 239 KNGTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYPKNTFLFE 298
Query: 836 ISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQ-IIMDEIMQHVCNLAQDQYGNYVIQ 894
+ + + + S +G R I+ LE+ + QQ +++ I+ + LA + G ++
Sbjct: 299 VMARHCCEIGQSR--FGARAIRACLENENATFEQQALVVASIIINSHLLATNSNGMLLLT 356
Query: 895 HVLEHGKPHERTTVIT-QLAGQIVRMSQQKFASNVVEKCLTFGS-PEERQLLINEMLGST 952
+L++ R ++ LA + K AS ++ K + PE R LL+ + S
Sbjct: 357 WLLDNSFFRNRHRLLAIHLATHLHTTCTHKLASTLIFKLINNKQEPESRNLLLKNLFFSE 416
Query: 953 DENEPLQAMMKDPFGNYVVQKVL 975
+N + G + KV+
Sbjct: 417 KDNVLTYILQDQAVGPSFIHKVI 439
>MGI|MGI:106253 [details] [associations]
symbol:D19Bwg1357e "DNA segment, Chr 19, Brigham & Women's
Genetics 1357 expressed" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001313
InterPro:IPR012959 InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 MGI:MGI:106253 GO:GO:0005783
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 eggNOG:NOG273657 HOVERGEN:HBG052166 KO:K14844
OMA:RKDCDKE OrthoDB:EOG4X3H13 EMBL:AK050829 EMBL:AK088081
EMBL:AK141893 EMBL:AK172872 IPI:IPI00222675 RefSeq:NP_803425.1
UniGene:Mm.261027 ProteinModelPortal:Q8BKS9 STRING:Q8BKS9
PhosphoSite:Q8BKS9 PaxDb:Q8BKS9 PRIDE:Q8BKS9
Ensembl:ENSMUST00000076219 GeneID:52874 KEGG:mmu:52874
UCSC:uc008hby.1 CTD:52874 GeneTree:ENSGT00390000015757
HOGENOM:HOG000237322 InParanoid:Q8BKS9 NextBio:309667 Bgee:Q8BKS9
Genevestigator:Q8BKS9 GermOnline:ENSMUSG00000041360 Uniprot:Q8BKS9
Length = 647
Score = 172 (65.6 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 64/277 (23%), Positives = 121/277 (43%)
Query: 747 VIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGS 806
VIQ F ++G E QR Q +L G ++ LS Y +++K L Q +++ G
Sbjct: 181 VIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGH 240
Query: 807 VMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVAL---STHPYGCRVIQRVLE 861
V K + + +++ + I + R + YG L + HP + +VLE
Sbjct: 241 VRKMLRHSEASAIVEYAYNDKAILEQR-NMLTEELYGNTFQLYKSADHP----TLDKVLE 295
Query: 862 HCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH---------GKPHERTTVITQL 912
A + +IMDE+ Q + +AQ + VI+H L H P R+ +I +
Sbjct: 296 -LQPAKLE-LIMDEMKQILTPMAQKEA---VIKHSLVHKVFLDFFTYAPPKPRSELIEAI 350
Query: 913 AGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQ 972
+V ++ + V CL G+P++R++++ M ++ + + + V+
Sbjct: 351 REAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTM------KTYVEKVANGQYSHLVLL 404
Query: 973 KVLETCDDQSL--ELILSRIRVHLNVLKKYTYGKHIV 1007
+ DD L ++I+S I L + YG+ ++
Sbjct: 405 AAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVL 441
Score = 138 (53.6 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 56/291 (19%), Positives = 129/291 (44%)
Query: 700 VEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQ 759
+ F+ D +R IQ ++ E++ + F E+ L + +++KF +G++ Q
Sbjct: 172 IAFAHDS--TRVIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQ 229
Query: 760 RAQLASQLTGHVLRLSLQMYGCRVIQKAL-EVVHVDQQTQMVAELDGSVMKCVHDQNGNH 818
A++ GHV ++ +++ A + ++Q+ + EL G+ + ++ +H
Sbjct: 230 VAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLY--KSADH 287
Query: 819 -VIQKCIECIP------QDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQI 871
+ K +E P D ++ I++ Q A+ H +V + ++
Sbjct: 288 PTLDKVLELQPAKLELIMDEMKQILTPM-AQKEAVIKHSLVHKVFLDFFTYAPPKPRSEL 346
Query: 872 IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEK 931
I + I + V LA G V H L HG P +R ++ + + +++ +++ V+
Sbjct: 347 I-EAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLA 405
Query: 932 ---CLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCD 979
C+ + +Q++I+E++ S L +++ D +G V+ ++ D
Sbjct: 406 AFDCID-DTKLVKQIIISEIISS------LPSIVNDKYGRKVLLYLMSPRD 449
Score = 45 (20.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 967 GNYVVQKVLETCDDQSLELILSRIRVHLNVLKKY-TYGKHIVSRIEKLIA 1015
G ++ +L++CD + + + ++ + L+K + + I + +EKL A
Sbjct: 598 GAIILSSLLQSCDQEVVNKVKGGLKPLIPTLEKNKSSSRGIQTLLEKLTA 647
>TAIR|locus:2144711 [details] [associations]
symbol:PUM21 "pumilio 21" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] InterPro:IPR001313 InterPro:IPR016024
PROSITE:PS50302 PROSITE:PS50303 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 EMBL:AB020752
EMBL:AL353994 eggNOG:COG5099 IPI:IPI00537619 PIR:T49937
RefSeq:NP_196523.1 UniGene:At.54788 ProteinModelPortal:Q9LXC5
SMR:Q9LXC5 EnsemblPlants:AT5G09610.1 GeneID:830820
KEGG:ath:AT5G09610 TAIR:At5g09610 HOGENOM:HOG000153154
InParanoid:Q9LXC5 OMA:HQEPGES PhylomeDB:Q9LXC5
ProtClustDB:CLSN2916885 Genevestigator:Q9LXC5 Uniprot:Q9LXC5
Length = 517
Score = 165 (63.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 61/256 (23%), Positives = 111/256 (43%)
Query: 757 ESQRAQLASQLTGH---VLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGSVMKCVHD 813
ES ++ S LT L L+ YG + + + L + +D + + D
Sbjct: 246 ESHLFKIGSALTTTKRIFLHLATNQYGSQAL-RILFRRSPSLDHLLFCAVDTNFFLLMSD 304
Query: 814 QNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIM 873
+ G +I I + + + + + Y + L+ GC + VL+ + +I
Sbjct: 305 KYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQEIRGIY-RDLIF 363
Query: 874 DEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCL 933
+ + + L+ D YG +V+Q++L P T + +L G R++ ++ S VVEKCL
Sbjct: 364 ECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKCL 423
Query: 934 TFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIRVH 993
S R ++ E G+ E M D FGN+VVQ L ++ + +L R
Sbjct: 424 K--SDFARDQVLEEFRGNAKE---WVRMTTDKFGNFVVQSALRVMKEKEMRPLL---REF 475
Query: 994 LNVLKKYTYGKHIVSR 1009
+ L+ + +GK + R
Sbjct: 476 VEKLRPH-FGKMEIGR 490
Score = 46 (21.3 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 613 TQPYRLDMQYSGNTFANPVLPSVGSGSFPNERN 645
TQP +YSG F P L V G +RN
Sbjct: 181 TQPDDSSSRYSGKPFPPPPLSFVSPG-VDKDRN 212
Score = 44 (20.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 400 NGHNQSMKQQFMDKS-TA-DNLAFSTHYIDFTRKNGIVPNLNASAINSNGQVNILKRTSS 457
NG N + D TA +NL +Y ++ G N N ++ N++ +L S
Sbjct: 5 NGKNPMPNDRGYDTLLTAFNNLKLYANYNH--QEPGESGNTNINSNNNHPNPPLLTAFKS 62
Query: 458 PNLYSKMNSTGFGGSSRS-VGRQQN 481
LY+ N+ G S + + R +N
Sbjct: 63 LKLYANKNNQEPGESGNTTINRNKN 87
>UNIPROTKB|A2VDN9 [details] [associations]
symbol:KIAA0020 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001313 InterPro:IPR012959
InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 GO:GO:0005783 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 CTD:9933
eggNOG:NOG273657 HOVERGEN:HBG052166 KO:K14844 OMA:RKDCDKE
OrthoDB:EOG4X3H13 GeneTree:ENSGT00390000015757 HOGENOM:HOG000237322
EMBL:DAAA02022736 EMBL:BC133332 EMBL:BT030563 IPI:IPI00693374
RefSeq:NP_001091499.1 UniGene:Bt.24626 STRING:A2VDN9
Ensembl:ENSBTAT00000017765 GeneID:514957 KEGG:bta:514957
InParanoid:A2VDN9 NextBio:20871591 Uniprot:A2VDN9
Length = 647
Score = 164 (62.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 76/351 (21%), Positives = 150/351 (42%)
Query: 680 DEFKTNKT---RSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHAR 736
DEFK K +S +LSD ++ + Q +++K E++ ++ ++ +
Sbjct: 110 DEFKKKKKELKQSRQLSDKTNYDIVIRAKQIWE-ILRRK--DCDKEKRVKLMSDLQKLIQ 166
Query: 737 -TLMTDVFGN---YVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH 792
+ T F + VIQ + + G E QR Q +L G ++ LS Y +++K L
Sbjct: 167 GKIKTIAFAHDSTRVIQCYIQFGNEEQRKQAFEELRGDLVELSKAKYSRNIVKKFLMYGS 226
Query: 793 VDQQTQMVAELDGSVMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVAL---S 847
Q +++ G V K + + +++ + I + R + YG L +
Sbjct: 227 KAQIAEIIRSFKGHVRKLLRHAEASAIVEYAYNDKAILEQR-NMLTEELYGNTFQLYKSA 285
Query: 848 THPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH-------- 899
HP + +VLE ++IMDE+ Q + +AQ + VI+H L H
Sbjct: 286 DHP----TLDKVLEV--QPEKLELIMDEMKQILTPMAQKEA---VIKHSLVHKVFLDFFT 336
Query: 900 -GKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPL 958
P R+ +I + +V ++ + V CL G+P++R++++ M +
Sbjct: 337 YAPPKLRSEMIEAIREAVVYLAHTHDGARVAMYCLWHGTPKDRKVIVKTM------KTYI 390
Query: 959 QAMMKDPFGNYVVQKVLETCDDQSL--ELILSRIRVHLNVLKKYTYGKHIV 1007
+ + + + V+ + DD L ++I+S I L + YG+ ++
Sbjct: 391 EKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIINSLPNIVNDKYGRKVL 441
>ZFIN|ZDB-GENE-030131-9808 [details] [associations]
symbol:si:ch211-241o7.5 "si:ch211-241o7.5"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR012959 InterPro:IPR016024
Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
ZFIN:ZDB-GENE-030131-9808 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 GeneTree:ENSGT00390000015757
EMBL:CR628386 IPI:IPI00799550 Ensembl:ENSDART00000127277
ArrayExpress:E9QJ83 Bgee:E9QJ83 Uniprot:E9QJ83
Length = 601
Score = 161 (61.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 57/274 (20%), Positives = 120/274 (43%)
Query: 747 VIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGS 806
V+Q F + G++ QR ++ +L H++ LS Y +++K L +Q +++ G
Sbjct: 165 VLQCFIQFGSDKQRKEVFDELKEHIVELSKSKYARNIVKKFLMYGSKEQVGEVMLAFKGK 224
Query: 807 VMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCD 864
V + + + V++ + I R+ + YG + C +++VLE
Sbjct: 225 VRQMLRHSEASSVVEYAYNDKAILSQRLM-LTEELYGNTFTVLKSSV-CPTLEKVLEA-- 280
Query: 865 DANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVL---------EHGKPHERTTVITQLAGQ 915
+ + I+DE+ Q + +AQ + VI+H L EH +RT +I +
Sbjct: 281 NPGKLESILDEMKQILTPMAQKEA---VIKHSLVHKVFLDFFEHAPDKQRTEMIESIREA 337
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVL 975
+V M+ + V CL G+ ++R++++ M + + + V+
Sbjct: 338 VVYMAHTHDGARVTMHCLWHGTTKDRKVIVKTM------KSYIAKFAMGEYAHLVLLAAF 391
Query: 976 ETCDDQSL--ELILSRIRVHLNVLKKYTYGKHIV 1007
+ DD L ++I+S + L+ + +GK ++
Sbjct: 392 DCIDDTKLVKQIIISEMVSSLSEIISNKHGKKVL 425
Score = 150 (57.9 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 60/286 (20%), Positives = 124/286 (43%)
Query: 683 KTNKTRSF-ELSDIVD---HVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTL 738
K +T+ EL D+V + F+ D +R +Q ++ + +++ +F E+ H L
Sbjct: 135 KQKRTKLMKELQDLVKGKIKTIAFAHDS--TRVLQCFIQFGSDKQRKEVFDELKEHIVEL 192
Query: 739 MTDVFGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKAL-EVVHVDQQT 797
+ +++KF +G++ Q ++ G V ++ V++ A + + Q+
Sbjct: 193 SKSKYARNIVKKFLMYGSKEQVGEVMLAFKGKVRQMLRHSEASSVVEYAYNDKAILSQRL 252
Query: 798 QMVAELDGSVMKCVHDQNGNHVIQKCIECIPQ------DRIQFIISSFYGQVVALSTHPY 851
+ EL G+ V + ++K +E P D ++ I++ Q A+ H
Sbjct: 253 MLTEELYGNTFT-VLKSSVCPTLEKVLEANPGKLESILDEMKQILTPM-AQKEAVIKHSL 310
Query: 852 GCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQ 911
+V EH D ++I + I + V +A G V H L HG +R ++
Sbjct: 311 VHKVFLDFFEHAPDKQRTEMI-ESIREAVVYMAHTHDGARVTMHCLWHGTTKDRKVIVKT 369
Query: 912 LAGQIVRMSQQKFASNVVEK---CLTFGSPEERQLLINEMLGSTDE 954
+ I + + ++A V+ C+ + +Q++I+EM+ S E
Sbjct: 370 MKSYIAKFAMGEYAHLVLLAAFDCID-DTKLVKQIIISEMVSSLSE 414
>UNIPROTKB|Q15397 [details] [associations]
symbol:KIAA0020 "Pumilio domain-containing protein
KIAA0020" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001313
InterPro:IPR012959 InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005783 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:CH471071 EMBL:AK292169 EMBL:AL354723 EMBL:AL589675
EMBL:BC016137 EMBL:D13645 EMBL:AF490254 EMBL:CR456957 EMBL:AY047588
EMBL:AY047589 EMBL:AY047590 IPI:IPI00791325 RefSeq:NP_055693.4
UniGene:Hs.493309 ProteinModelPortal:Q15397 IntAct:Q15397
MINT:MINT-1404790 STRING:Q15397 PhosphoSite:Q15397 DMDM:81175177
SWISS-2DPAGE:Q15397 PaxDb:Q15397 PRIDE:Q15397 DNASU:9933
Ensembl:ENST00000397885 GeneID:9933 KEGG:hsa:9933 UCSC:uc003zhp.1
CTD:9933 GeneCards:GC09M002720 HGNC:HGNC:29676 HPA:HPA002353
MIM:609960 neXtProt:NX_Q15397 PharmGKB:PA134895115 eggNOG:NOG273657
HOVERGEN:HBG052166 InParanoid:Q15397 KO:K14844 OMA:RKDCDKE
OrthoDB:EOG4X3H13 ChiTaRS:KIAA0020 GenomeRNAi:9933 NextBio:37470
Bgee:Q15397 CleanEx:HS_KIAA0020 Genevestigator:Q15397
GermOnline:ENSG00000080608 Uniprot:Q15397
Length = 648
Score = 159 (61.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 73/348 (20%), Positives = 148/348 (42%)
Query: 680 DEFKTNKT---RSFELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHAR 736
D+FK K +S +LSD ++ + Q +++K E++ ++ ++ +
Sbjct: 111 DDFKKKKKELKQSRQLSDKTNYDIVVRAKQMWE-ILRRK--DCDKEKRVKLMSDLQKLIQ 167
Query: 737 -TLMTDVFGN---YVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVH 792
+ T F + VIQ + ++G E QR Q +L ++ LS Y +++K L
Sbjct: 168 GKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMYGS 227
Query: 793 VDQQTQMVAELDGSVMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVALSTHP 850
Q +++ G V K + + +++ + I + R + YG L
Sbjct: 228 KPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQR-NMLTEELYGNTFQLYKSA 286
Query: 851 YGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH---------GK 901
R + +VLE ++IMDE+ Q + +AQ + VI+H L H
Sbjct: 287 -DHRTLDKVLEV--QPEKLELIMDEMKQILTPMAQKEA---VIKHSLVHKVFLDFFTYAP 340
Query: 902 PHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAM 961
P R+ +I + +V ++ + V CL G+P++R++++ M ++ +
Sbjct: 341 PKLRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTM------KTYVEKV 394
Query: 962 MKDPFGNYVVQKVLETCDDQSL--ELILSRIRVHLNVLKKYTYGKHIV 1007
+ + V+ + DD L ++I+S I L + YG+ ++
Sbjct: 395 ANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVL 442
>WB|WBGene00004240 [details] [associations]
symbol:puf-4 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 eggNOG:COG5099 GeneTree:ENSGT00390000017241
HOGENOM:HOG000016078 EMBL:FO081656 PIR:T33752 RefSeq:NP_500301.1
UniGene:Cel.28747 ProteinModelPortal:Q8I723 SMR:Q8I723
EnsemblMetazoa:M4.2 GeneID:191754 KEGG:cel:CELE_M4.2 UCSC:M4.2
CTD:191754 WormBase:M4.2 InParanoid:Q8I723 NextBio:950224
Uniprot:Q8I723
Length = 420
Score = 161 (61.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 47/159 (29%), Positives = 87/159 (54%)
Query: 785 QKAL-EVVHVDQQTQMVAELDGSVMK--CVHDQNGNHVIQKCIECIPQDRIQFIISSFYG 841
QK + E + + +++ +EL G + C+ DQNGNHVIQ+ ++ +P QF++ F
Sbjct: 224 QKIIVEYLAIVLASRLASELRGVDLTHACI-DQNGNHVIQQLLKTLPPSSWQFLVEFFSR 282
Query: 842 QV--VALSTHPYGCRVIQRVLEHCDDANTQQII-----MDEIMQHVCNLAQDQYGNYVIQ 894
V + Y CRVIQ LE + +Q++ + I+++ LA +++ NYV++
Sbjct: 283 DTNFVEVCEDKYVCRVIQSTLETL--SKREQLVALRRLVGVIIRNCGQLASNEFANYVVR 340
Query: 895 HVLEHGKPHE---RTTVITQ-LAGQIVRMSQQKFASNVV 929
HV++ R +I + L ++ MSQ+K+AS+++
Sbjct: 341 HVIKCDDAEMTIYRDVIIEKCLLQNLLSMSQEKYASHMI 379
Score = 133 (51.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 56/232 (24%), Positives = 108/232 (46%)
Query: 800 VAELDGSVMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVALST--HPYGCRV 855
V ++D S+M+ + D+NG +Q +C + + +V+ L H +G
Sbjct: 153 VIQMD-SLMEFMKDKNGCRFLQDQYSEDCHVESHQKIFEQLVADRVIFLDQCKHMFGNFF 211
Query: 856 IQRVLEHCDDANTQQIIMDEIMQHVCN-LAQ------------DQYGNYVIQHVLEHGKP 902
+QRVLE C DA Q+II++ + + + LA DQ GN+VIQ +L+ P
Sbjct: 212 VQRVLE-CSDAEEQKIIVEYLAIVLASRLASELRGVDLTHACIDQNGNHVIQQLLKTLPP 270
Query: 903 HERTTVITQLAGQ--IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQA 960
++ + V + + K+ V++ L S E+ + + ++G N
Sbjct: 271 SSWQFLVEFFSRDTNFVEVCEDKYVCRVIQSTLETLSKREQLVALRRLVGVIIRN--CGQ 328
Query: 961 MMKDPFGNYVVQKVLETCDDQSL----ELILSRIRV-HLNVLKKYTYGKHIV 1007
+ + F NYVV+ V++ CDD + ++I+ + + +L + + Y H++
Sbjct: 329 LASNEFANYVVRHVIK-CDDAEMTIYRDVIIEKCLLQNLLSMSQEKYASHMI 379
Score = 38 (18.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 529 ALDFHSPPMDPRYAQ 543
A +H P PRY Q
Sbjct: 72 ATSYHQRPDTPRYQQ 86
>CGD|CAL0000283 [details] [associations]
symbol:orf19.4262 species:5476 "Candida albicans" [GO:0032473
"external side of mitochondrial outer membrane" evidence=IEA]
[GO:0034629 "cellular protein complex localization" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0051654
"establishment of mitochondrion localization" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 CGD:CAL0000283 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 EMBL:AACQ01000021
EMBL:AACQ01000022 eggNOG:COG5099 RefSeq:XP_720570.1
RefSeq:XP_720698.1 ProteinModelPortal:Q5AGB7 GeneID:3637600
GeneID:3637766 KEGG:cal:CaO19.11738 KEGG:cal:CaO19.4262
Uniprot:Q5AGB7
Length = 492
Score = 153 (58.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 41/149 (27%), Positives = 72/149 (48%)
Query: 738 LMTDVFGNYVIQKFFEHGTESQ-RAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVD-Q 795
L D GN ++QK F S + + ++ ++ +L + G IQK + + H D Q
Sbjct: 20 LSYDYLGNTIVQKLFTLVESSLVKLMMVKEVAPYLTQLGIHKNGTWAIQKIINLCHSDYQ 79
Query: 796 QTQMV-AELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPYGCR 854
Q ++ A L +K +DQ GN+VIQ CI+ F+ + + +S +G R
Sbjct: 80 QMYLIGASLKPYAVKLFNDQFGNYVIQGCIK-FGSPFNDFVFEAMLDNFLEISVGRFGAR 138
Query: 855 VIQRVLEHCDDANTQQIIMDEIMQHVCNL 883
I+ +LE C D+++ + +E + V L
Sbjct: 139 CIRTILESCHDSSSTSPVTNEQVLLVAGL 167
>RGD|1564753 [details] [associations]
symbol:LOC499339 "hypothetical protein LOC499339" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR001313
InterPro:IPR012959 InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 RGD:1564753 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
eggNOG:NOG273657 HOVERGEN:HBG052166 KO:K14844 OMA:RKDCDKE
OrthoDB:EOG4X3H13 GeneTree:ENSGT00390000015757 HOGENOM:HOG000237322
EMBL:BC092579 EMBL:BC098744 IPI:IPI00563669 RefSeq:NP_001020207.1
UniGene:Rn.127943 UniGene:Rn.52964 ProteinModelPortal:Q562C7
STRING:Q562C7 PhosphoSite:Q562C7 PRIDE:Q562C7
Ensembl:ENSRNOT00000033724 GeneID:499339 KEGG:rno:499339
InParanoid:Q562C7 NextBio:702600 Genevestigator:Q562C7
GermOnline:ENSRNOG00000012574 Uniprot:Q562C7
Length = 647
Score = 154 (59.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 59/277 (21%), Positives = 120/277 (43%)
Query: 747 VIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGS 806
VIQ ++G+E QR +L G ++ LS Y +++K L Q +++ G
Sbjct: 181 VIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGH 240
Query: 807 VMKCVHDQNGNHVIQKCI--ECIPQDRIQFIISSFYGQVVAL---STHPYGCRVIQRVLE 861
V K + + +++ + I + R + YG L + HP +++VLE
Sbjct: 241 VRKMLRHSEASAIVEYAYNDKAILEQR-NMLTEELYGNTFQLYKSADHP----TLEKVLE 295
Query: 862 HCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEH---------GKPHERTTVITQL 912
++I+DE+ Q + +AQ + VI+H L H P R+ +I +
Sbjct: 296 V--QPGKLELILDEMKQILTPMAQKEA---VIKHSLVHKVFLDFFTYAPPKLRSELIEAI 350
Query: 913 AGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQ 972
+V ++ + V CL G+P++R++++ M ++ + + + V+
Sbjct: 351 REAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTM------KTYVEKIANGQYSHLVLL 404
Query: 973 KVLETCDDQSL--ELILSRIRVHLNVLKKYTYGKHIV 1007
+ DD L ++I+S + L + YG+ ++
Sbjct: 405 AAFDCIDDTKLVKQIIISEVISSLPSIVNDKYGRKVL 441
Score = 136 (52.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 55/287 (19%), Positives = 128/287 (44%)
Query: 700 VEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQ 759
+ F+ D +R IQ ++ + E++ F E+ L + +++KF +G++ Q
Sbjct: 172 IAFAHDS--TRVIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQ 229
Query: 760 RAQLASQLTGHVLRLSLQMYGCRVIQKAL-EVVHVDQQTQMVAELDGSVMKCVHDQNGNH 818
A++ GHV ++ +++ A + ++Q+ + EL G+ + ++ +H
Sbjct: 230 IAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLY--KSADH 287
Query: 819 -VIQKCIECIPQDRIQFIISSF------YGQVVALSTHPYGCRVIQRVLEHCDDANTQQI 871
++K +E P +++ I+ Q A+ H +V + ++
Sbjct: 288 PTLEKVLEVQP-GKLELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEL 346
Query: 872 IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEK 931
I + I + V LA G V H L HG P +R ++ + + +++ +++ V+
Sbjct: 347 I-EAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSHLVLLA 405
Query: 932 ---CLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVL 975
C+ + +Q++I+E++ S L +++ D +G V+ +L
Sbjct: 406 AFDCID-DTKLVKQIIISEVISS------LPSIVNDKYGRKVLLYLL 445
Score = 50 (22.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 967 GNYVVQKVLETCDDQSLELILSRIRVHLNVLKKY-TYGKHIVSRIEKLIA 1015
G V+ +L++CD + + + ++ + L+K + K I + +EKL A
Sbjct: 598 GAIVLSSLLQSCDQDVVNKVKAGLKTLIPTLEKTKSTSKGIQTLLEKLTA 647
>CGD|CAL0005913 [details] [associations]
symbol:orf19.3547 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0000900 "translation repressor activity, nucleic
acid binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IEA] InterPro:IPR001313 InterPro:IPR012959
InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 CGD:CAL0005913 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 EMBL:AACQ01000094
EMBL:AACQ01000093 eggNOG:NOG273657 KO:K14844 HOGENOM:HOG000246618
RefSeq:XP_714906.1 RefSeq:XP_714969.1 ProteinModelPortal:Q59ZH2
STRING:Q59ZH2 GeneID:3643365 GeneID:3643461 KEGG:cal:CaO19.11031
KEGG:cal:CaO19.3547 Uniprot:Q59ZH2
Length = 667
Score = 143 (55.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 69/305 (22%), Positives = 136/305 (44%)
Query: 690 FELS-DIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVI 748
+ELS D+++ +V D SR +Q ++ ++ E + I + L T +G Y++
Sbjct: 159 WELSHDVINDLV-MKHD--ASRVVQTLVKYSSKERRDIIVNSLKGSFYQLATSAYGKYLL 215
Query: 749 QKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHV--DQQTQMVAELDGS 806
K +G++ RA + +L G + +L G V++ L V++ +Q+ QM+ E GS
Sbjct: 216 IKLLHYGSKESRAIIVDELHGKLRKLMRHKEGAYVVED-LYVLYSTSEQRQQMIREFWGS 274
Query: 807 VMKCVHDQN-GNHVIQKCIECIPQDRIQFIISSFYGQVVA-LSTHPYGCRVIQR------ 858
D G V+ E ++ Q I+S+ YG + A + G +++
Sbjct: 275 QYAVFRDSGKGKTVLDITRESA--EKKQLIMSNLYGTIKASVEKGSTGFQILHAAMKEYV 332
Query: 859 -VLEHCDDANTQQI--IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQ 915
VL+ DAN I +D + + L Q G+ V +++ ER +I L
Sbjct: 333 TVLKDDIDANDSAIRDFIDLLGEQFAELVHTQEGSDVACNLIALANAKERKVIIRGLKTH 392
Query: 916 IVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTD-ENEPLQAMMKDPFGNYVVQKV 974
+ + ++ N+V +T + +LI++ G+ +E + +++D F + +
Sbjct: 393 TNELIKNEYG-NIV--LITLFMTVDDTVLISKSFGAEIFTSELVPQLIQDKFSRRPILYL 449
Query: 975 LETCD 979
L+ D
Sbjct: 450 LKGLD 454
>WB|WBGene00001402 [details] [associations]
symbol:fbf-2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0051729 "germline cell cycle switching, mitotic to meiotic cell
cycle" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0017148 "negative regulation of
translation" evidence=IGI] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IPI] [GO:0043186 "P granule" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0030154 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0017148 GO:GO:0040011 GO:GO:0007283
GO:GO:0051729 GO:GO:0040035 GO:GO:0003730 GO:GO:0045132
GO:GO:0040027 GO:GO:0040022 GO:GO:0043186 eggNOG:COG5099
GeneTree:ENSGT00390000017241 HOGENOM:HOG000016078 EMBL:FO080717
PIR:T16128 RefSeq:NP_495220.1 PDB:3K5Q PDB:3K5Y PDB:3K5Z PDB:3K61
PDB:3K62 PDB:3K64 PDB:3QG9 PDB:3QGB PDB:3QGC PDB:3V6Y PDB:3V74
PDBsum:3K5Q PDBsum:3K5Y PDBsum:3K5Z PDBsum:3K61 PDBsum:3K62
PDBsum:3K64 PDBsum:3QG9 PDBsum:3QGB PDBsum:3QGC PDBsum:3V6Y
PDBsum:3V74 ProteinModelPortal:Q09312 SMR:Q09312 MINT:MINT-3385835
STRING:Q09312 EnsemblMetazoa:F21H12.5 GeneID:174017
KEGG:cel:CELE_F21H12.5 UCSC:F21H12.5 CTD:174017 WormBase:F21H12.5
InParanoid:Q09312 OMA:FALENID EvolutionaryTrace:Q09312
NextBio:882143 Uniprot:Q09312
Length = 632
Score = 145 (56.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 88/376 (23%), Positives = 158/376 (42%)
Query: 626 TFANPVLPSVGSGSFPNERNSRFTXXXXXXXXXXXXWHLD-AGINMEGRLSSSLLDEFKT 684
T +N VLP+ S E SR + + +D G + L ++
Sbjct: 162 TRSNNVLPTWSLDS-NGEMRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQ- 219
Query: 685 NKTRSFE-LSDIVDHVVEFSTDQYGSRFIQQKL--EAATAEEK-TRIFPEIIPHARTLMT 740
K + FE + D ++ ST+ +G+ +Q + AT ++ T+ ++ + MT
Sbjct: 220 -KFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMT 278
Query: 741 DV----FGNYVIQKFFEHGTESQRAQLASQLT--GHVLRLSLQMYGCRVIQKALEVVHVD 794
D+ F VIQ ++ S +L L ++ + + VIQK + V+ +
Sbjct: 279 DMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPL- 337
Query: 795 QQTQMVAELDGS---VMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVALSTHPY 851
+ + + + + + + D+ G V+Q IE + D + ++S A +
Sbjct: 338 KNWEFIVDFVATPEHLRQICSDKYGCRVVQTIIEKLTADSMNVDLTS-----AAQNLRE- 391
Query: 852 GCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGK-PHERTTVIT 910
R +QR +M + LA ++Y NY+IQH++ + R +I
Sbjct: 392 --RALQR-------------LMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYRECIIE 436
Query: 911 Q-LAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGS----TDEN-EPLQAMMKD 964
+ L ++ +SQ+KFAS+VVEK E +++E+ D + L MM
Sbjct: 437 KCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYIPHPDTGKDALDIMMFH 496
Query: 965 PFGNYVVQKVLETCDD 980
FGNYVVQ +L C D
Sbjct: 497 QFGNYVVQCMLTICCD 512
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 420 AFSTHYIDFTRKNGIVPNLNASAINSNGQV 449
A S + FTR N ++P + ++SNG++
Sbjct: 153 ALSRNSRSFTRSNNVLPTWS---LDSNGEM 179
>SGD|S000002904 [details] [associations]
symbol:PUF6 "Pumilio-homology domain protein that binds the
3' UTR of ASH1 mRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0015934 "large ribosomal subunit"
evidence=IDA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0000900 "translation repressor activity, nucleic
acid binding" evidence=IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IDA] InterPro:IPR001313 InterPro:IPR012959
InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SGD:S000002904 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005934 GO:GO:0006810
EMBL:BK006938 EMBL:U33057 GO:GO:0003730 GO:GO:0042273 GO:GO:0000900
GO:GO:0015934 eggNOG:NOG273657 KO:K14844
GeneTree:ENSGT00390000015757 HOGENOM:HOG000246618 OMA:FAELVHT
OrthoDB:EOG41ZJKF PIR:S69554 RefSeq:NP_010784.1
ProteinModelPortal:Q04373 SMR:Q04373 DIP:DIP-6579N IntAct:Q04373
MINT:MINT-637951 STRING:Q04373 PaxDb:Q04373 PeptideAtlas:Q04373
EnsemblFungi:YDR496C GeneID:852107 KEGG:sce:YDR496C CYGD:YDR496c
NextBio:970463 Genevestigator:Q04373 GermOnline:YDR496C
Uniprot:Q04373
Length = 656
Score = 148 (57.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 69/332 (20%), Positives = 141/332 (42%)
Query: 690 FELSDIVDHVVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQ 749
+ELS D + + SR +Q ++ ++ + + +I + L T +G Y++
Sbjct: 154 WELSK--DCISDLVLKHDASRIVQTLVKYSSKDRREQIVDALKGKFYVLATSAYGKYLLV 211
Query: 750 KFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQK--ALEVVHVDQQTQMVAELDGSV 807
K +G+ S R + ++L G + +L G V++ L H +Q+ QM+ E GS
Sbjct: 212 KLLHYGSRSSRQTIINELHGSLRKLMRHREGAYVVEDLFVLYATH-EQRQQMIKEFWGSE 270
Query: 808 MKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVVA-LSTHPYGCRVIQRVL-EHCDD 865
+ + + I+K E + R I + G + A + G +++ + E+
Sbjct: 271 YAVFRETHKDLTIEKVCESSIEKR-NIIARNLIGTITASVEKGSTGFQILHAAMREYVKI 329
Query: 866 ANTQQII-MDEIM-QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQK 923
AN ++I M E++ + L G+ V ++ ER ++ L ++ + +
Sbjct: 330 ANEKEISEMIELLHEQFAELVHTPEGSDVACTLVARANAKERKLILKALKNHAEKLIKNE 389
Query: 924 FASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCDDQSL 983
+ N+V +T + + +L+ + T + E LQ + D FG +L D +
Sbjct: 390 YG-NIV--FITILNCVDDTVLVFKTFSPTVK-EHLQEFIIDKFGRRPWLYILLGLDGKYF 445
Query: 984 ELILSRIRVHLNVLKKYTYGKHIVSRIEKLIA 1015
I+ + L K T K + R +L++
Sbjct: 446 SPIVKNELLRYIELSKATSKKDPLQRRHELLS 477
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 372 RHADEVSHVQSQLQLNPDNQSDFLYDTSNGHNQSMKQQFMDKSTADN 418
R A EVSH + +L P D+S+ ++ K++ S++D+
Sbjct: 12 RSAKEVSHSEKKLAKKPR----ISIDSSDEESELSKKEDAVSSSSDD 54
>UNIPROTKB|E2RBF2 [details] [associations]
symbol:KIAA0020 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR012959 InterPro:IPR016024
Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
OMA:RKDCDKE GeneTree:ENSGT00390000015757 EMBL:AAEX03000606
EMBL:AAEX03000607 Ensembl:ENSCAFT00000003228 Uniprot:E2RBF2
Length = 648
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 58/291 (19%), Positives = 129/291 (44%)
Query: 700 VEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQ 759
+ F+ D +R IQ ++ E++ + F E+ L + +++KF +G++ Q
Sbjct: 173 IAFAHDS--TRVIQCYIQYGNEEQREQAFEELRDDFVQLSKAKYSRNIVKKFLMYGSKPQ 230
Query: 760 RAQLASQLTGHVLRLSLQMYGCRVIQKAL-EVVHVDQQTQMVAELDGSVMKCVHDQNGNH 818
A++ GHV ++ +++ A + ++Q+ + EL G+ + ++ +H
Sbjct: 231 IAEIMRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLY--KSADH 288
Query: 819 -VIQKCIECIPQ------DRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQI 871
+ K +E P+ D ++ I++ Q A+ H +V + ++
Sbjct: 289 PTLDKVLETQPEKLDLIMDEMKQILTPM-AQKEAVIKHSLVHKVFLDFFTYAPPKLRSEM 347
Query: 872 IMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEK 931
I + I + V LA G V H L HG P +R ++ + I +++ +++ V+
Sbjct: 348 I-EAIREAVIYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYIEKVANGQYSHLVLLA 406
Query: 932 ---CLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCD 979
C+ + +Q++I+E++ S L ++ D +G V+ +L D
Sbjct: 407 AFDCID-DTKLVKQIIISEIINS------LPNIVNDKYGRKVLLYLLSPRD 450
>TAIR|locus:2086760 [details] [associations]
symbol:PUM24 "pumilio 24" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006406 "mRNA export from nucleus" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA]
InterPro:IPR001313 InterPro:IPR016024 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
EMBL:AB028608 eggNOG:NOG273657 KO:K14844 EMBL:AY045638
IPI:IPI00521400 RefSeq:NP_566559.1 UniGene:At.5720
ProteinModelPortal:Q9LRZ3 SMR:Q9LRZ3 STRING:Q9LRZ3 PaxDb:Q9LRZ3
PRIDE:Q9LRZ3 EnsemblPlants:AT3G16810.1 GeneID:820934
KEGG:ath:AT3G16810 TAIR:At3g16810 HOGENOM:HOG000070534
InParanoid:Q9LRZ3 OMA:IKHGSAK PhylomeDB:Q9LRZ3
ProtClustDB:CLSN2688458 Genevestigator:Q9LRZ3 Uniprot:Q9LRZ3
Length = 641
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 48/252 (19%), Positives = 110/252 (43%)
Query: 699 VVEFSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTES 758
V E + SR +Q ++ + EK +F E+ P L ++ + + IQK + ++
Sbjct: 123 VPEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKMLDGASKQ 182
Query: 759 QRAQLASQLTGHVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAELDGS---VMKCVHDQN 815
Q A S L GHV L ++G V++ A + Q+ +++AEL + + K + N
Sbjct: 183 QLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELLAELYSTELQLFKGLTTSN 242
Query: 816 GNHVIQKCIEC-IPQDRIQFIISSFYGQVV--ALSTHPYGCRVIQRVLEHCDDANTQQII 872
V+ + + + + +++ ++ + H +++ L D + ++
Sbjct: 243 EKTVVDIIAKLGLQKGAVNRHMTAIIQPILEKGIVDHTITHKLLIEYLTIADKTSAADVL 302
Query: 873 MDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKC 932
+ + + G+ + ++HG ER +I + + +M+ +F S V+ C
Sbjct: 303 QLLTGSLLLRMVHTRDGSRLAMLSIKHGSAKERKKIIKAMKEHVKKMAFDQFGSMVLA-C 361
Query: 933 LTFGSPEERQLL 944
+ F ++ +L+
Sbjct: 362 I-FSIVDDTKLV 372
Score = 126 (49.4 bits), Expect = 0.00039, P = 0.00039
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 829 QDRIQFI---ISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCNLAQ 885
+DR + I I G+V ++ RV+Q ++ C A + ++ E+ NLA
Sbjct: 106 EDRSKLISEAIRKMKGKVPEIAVSHVSSRVLQTCVKFCSQAE-KDVLFTELQPQFLNLAS 164
Query: 886 DQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQLLI 945
++Y + IQ +L+ + I+ L G + + + F S VVE GS ++Q L+
Sbjct: 165 NKYAVHFIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELL 224
Query: 946 NEMLGSTD 953
E+ ST+
Sbjct: 225 AELY-STE 231
>UNIPROTKB|E1C1R5 [details] [associations]
symbol:KIAA0020 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001313 InterPro:IPR012959
InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 GO:GO:0005783 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 OMA:RKDCDKE
GeneTree:ENSGT00390000015757 EMBL:AADN02068459 EMBL:AADN02068460
EMBL:AADN02068461 IPI:IPI00574038 Ensembl:ENSGALT00000016546
ArrayExpress:E1C1R5 Uniprot:E1C1R5
Length = 638
Score = 145 (56.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 58/277 (20%), Positives = 118/277 (42%)
Query: 709 SRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLT 768
+R IQ ++ +++ F E+ L + +++KF +GT+ Q A++
Sbjct: 172 TRVIQCFIQYGNDKQRQETFEELKDSLVELSKSKYSRNIVKKFLMYGTKQQIAEIIKSFK 231
Query: 769 GHVLRLSLQMYGCRVIQKAL-EVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQKCIECI 827
GHV ++ V++ A + ++Q+ + EL G+ + V+ + K +E
Sbjct: 232 GHVKKMLRHAEASAVVEYAYNDKAILEQRNMLTEELYGNTFQ-VYKTPIVPTLDKVLEAQ 290
Query: 828 PQDRIQFI-----ISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQQIIMDEIMQHVCN 882
P+ R + I + Q A+ H +V H ++I + I + V
Sbjct: 291 PEKREAILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTHALPKQRSEMI-EAIREAVIY 349
Query: 883 LAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCLTFGSPEERQ 942
LA G V H L HG P +R ++ + I +++ +F+ V+ F ++ +
Sbjct: 350 LAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYIEKIATGEFSHLVL--LAAFDCIDDTK 407
Query: 943 LLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLETCD 979
L+ + L T+ N L +++ + G V+ +L D
Sbjct: 408 LV--KQLIITELNASLPSLISNKHGKKVLLYLLSPRD 442
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 408 QQFMDKSTADNLAFSTHYIDFTR 430
+QF +K ++ LA Y D T+
Sbjct: 70 KQFKNKQQSEKLAKKRRYQDSTQ 92
>SGD|S000006246 [details] [associations]
symbol:PUF2 "Member of the PUF protein family" species:4932
"Saccharomyces cerevisiae" [GO:0003729 "mRNA binding"
evidence=ISS;IDA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IGI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001313 InterPro:IPR012677 InterPro:IPR016024
Pfam:PF00076 Pfam:PF00806 PROSITE:PS50102 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SMART:SM00360 SGD:S000006246
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0000288 EMBL:Z68111 eggNOG:COG5099
EMBL:Z73616 GeneTree:ENSGT00690000103065 HOGENOM:HOG000113136
OrthoDB:EOG4MWCFG PIR:S54067 RefSeq:NP_015367.1
ProteinModelPortal:Q12221 SMR:Q12221 IntAct:Q12221
MINT:MINT-4505998 STRING:Q12221 PaxDb:Q12221 EnsemblFungi:YPR042C
GeneID:856155 KEGG:sce:YPR042C CYGD:YPR042c NextBio:981289
Genevestigator:Q12221 GermOnline:YPR042C Uniprot:Q12221
Length = 1075
Score = 148 (57.2 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 70/297 (23%), Positives = 129/297 (43%)
Query: 710 RFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQLASQLTG 769
+F L E+ + + +P L +D GN VIQK FE+ + R + +
Sbjct: 559 QFDSNSLSTIEMEQLAIVMLDQLPE---LSSDYLGNTVIQKLFENSSNIIRDIMLRKCNK 615
Query: 770 HVLRLSLQMYGCRVIQKALEVVHVDQQTQMVAE-LDGSVMKCVHDQNGNHVIQKCIEC-I 827
++ + + G V QK +++ + +Q +V + +DQ GN+VIQ ++
Sbjct: 616 YLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFGNYVIQGILKFGF 675
Query: 828 PQDRIQFIISSFYGQVVALSTHPYGCRVIQRVLEHCDDANTQ-QIIMDEIMQHVCN--LA 884
P + FI S + + YG R ++ LE D TQ Q++ + V + LA
Sbjct: 676 PWN--SFIFESVLSHFWTIVQNRYGSRAVRACLE-ADSIITQCQLLTITSLIIVLSPYLA 732
Query: 885 QDQYGNYVIQHVLEHGK-PHERTTVITQLAGQ-IVRMSQQKFASNVVEKCLTFGSPEERQ 942
D G +I +L+ P++ + +L + +V++ K S V K L EE
Sbjct: 733 TDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLGSLTVLKILNLRGGEEEA 792
Query: 943 LLINEML-----GSTDENEPL-QAMMKDPFGNYVVQKVLET--CDDQSLELILSRIR 991
L N+++ G + L Q + + +G + KVL + D+ + +++IR
Sbjct: 793 LSKNKIIHAIFDGPISSDSILFQILDEGNYGPTFIYKVLTSRILDNSVRDEAITKIR 849
Score = 38 (18.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 279 VLHSAAASPGLVRTKSHN-RIPSHSFASAVGSSLSRSTT 316
V+ +++P + + ++ R+ S SF A SL +TT
Sbjct: 97 VVPPTSSTPDSLNSTTYAPRVSSDSFTVATPLSLQSTTT 135
>POMBASE|SPCP1E11.11 [details] [associations]
symbol:puf6 "Puf family RNA-binding protein Puf6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000900
"translation repressor activity, nucleic acid binding"
evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] [GO:2000766 "negative regulation of cytoplasmic
translation" evidence=ISO] InterPro:IPR001313 InterPro:IPR012959
InterPro:IPR016024 Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 PomBase:SPCP1E11.11 SUPFAM:SSF48371 GO:GO:0005730
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003730 GO:GO:0042273 GO:GO:0000900
GO:GO:2000766 eggNOG:NOG273657 KO:K14844 PIR:T41690
RefSeq:NP_588564.1 ProteinModelPortal:Q9UU76 STRING:Q9UU76
PRIDE:Q9UU76 EnsemblFungi:SPCP1E11.11.1 GeneID:2538833
KEGG:spo:SPCP1E11.11 HOGENOM:HOG000246618 OMA:FAELVHT
OrthoDB:EOG41ZJKF NextBio:20800015 Uniprot:Q9UU76
Length = 642
Score = 136 (52.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 71/353 (20%), Positives = 151/353 (42%)
Query: 686 KTRSFELSDIVDHVVE---FSTDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDV 742
KT EL D++ V+ F D SR +Q ++ + +++ I E+ L
Sbjct: 152 KTIIAELFDLIRTNVKQLVFKHDM--SRVVQTCVKFGSKQQRETICAELAGSYVDLCKSP 209
Query: 743 FGNYVIQKFFEHGTESQRAQLASQLTGHVLRLSLQMYGCRVIQKAL-EVVHVDQQTQMVA 801
+G Y+ K F++GT + + ++ G+V+++ V++ A E ++ QQ ++
Sbjct: 210 YGKYLAIKIFKYGTPKMKEVILGEMYGNVVKMIRHREAAYVVEDAFREFTNLQQQRALIC 269
Query: 802 ELDGSVMKCVHDQNGNHVIQKCIECIPQDRIQFIISSFYGQVV-ALSTHPYGCRVIQR-V 859
E G + D+ + I K + P+ R I+ + + + +++ G ++ R +
Sbjct: 270 EFYGPEFQVFKDRTQDIHIDKLLIDHPEKRPS-IMQNLWKTIEGSIAKGSIGFTMVHRAM 328
Query: 860 LEHCD--DANTQQIIMDEIMQHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIV 917
LE + D+N + +++ + + + G+ V + +R ++ L ++
Sbjct: 329 LEFINHADSNEAKELLNLTKELIYEFVHTRDGSQVAMKLFALANAKDRKVMLKSLRPYLI 388
Query: 918 RMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKVLET 977
++ + VV L + ++ ++L + E E L+ + D F ++ VL
Sbjct: 389 ETAKDSYGHLVVVAALDC---TDDTIMTGKLLQAEFEGELLK-LSADKFARRILLYVLVG 444
Query: 978 CDDQSLELILSRIRVH-LNVLKKYTYGKHIVSRIEKLIAT-GERRIGLSSSVS 1028
+D +R + L+ LK T K + R +L AT G I L S +
Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNELKATIGPLLISLISKAA 497
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 558 SASDPFAARNHFGSSLGDSDGLQKAHLELLLAQQNQQHEMQ 598
S + FA FG S ++D L+ A E A+ +++ Q
Sbjct: 68 SEDEDFAG---FGESASENDELESAESE---AENDEESSSQ 102
>DICTYBASE|DDB_G0288551 [details] [associations]
symbol:DDB_G0288551 "pumilio RNA-binding
region-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001313 InterPro:IPR012959 InterPro:IPR016024
Pfam:PF08144 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
dictyBase:DDB_G0288551 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 eggNOG:COG5099 KO:K14844
EMBL:AAFI02000116 RefSeq:XP_636672.1 ProteinModelPortal:Q54IS5
STRING:Q54IS5 EnsemblProtists:DDB0238675 GeneID:8626685
KEGG:ddi:DDB_G0288551 OMA:LLRNDHI ProtClustDB:CLSZ2429870
Uniprot:Q54IS5
Length = 679
Score = 134 (52.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 59/315 (18%), Positives = 131/315 (41%)
Query: 643 ERNSRFTXXXXXXXXXXXXWHLDAGINMEGRLSSSLLDEFKTNKTRSFELSDIVDHVVEF 702
E+ S+F W I + ++L+++ T K + L+ IV H
Sbjct: 98 EKKSKFDKNHSLVRDLKILWVKIKEIKLSSEERATLIEQL-TQKLKGNVLNVIVKH---- 152
Query: 703 STDQYGSRFIQQKLEAATAEEKTRIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRAQ 762
D SR +Q L+ ++ +F E+ T+ +G ++I K ++GTE QR
Sbjct: 153 --D--ASRVVQTLLKYGNEAQREIVFKELKDQELTISKTQYGRFLILKLLKYGTEEQRNT 208
Query: 763 LASQLTGHVLRLSLQMYGCRVIQKAL-EVVHVDQQTQMVAELDGSVMKCVHDQNGNHVIQ 821
+ Q G + + V++ E+ Q+T ++ E G + + +
Sbjct: 209 IIKQFYGKFVSMISHKESSSVVEYIFSEIASKLQKTHIIEEFYGPEYRLFKTEQPR-TLD 267
Query: 822 KCIECIPQDRIQFIISSFYGQVVALSTHPYGCRVIQ------RVLEHCDDANTQQII-MD 874
+E PQ + + II+ Q+ + + G R++Q ++E A+ + M
Sbjct: 268 SIVESSPQKK-EPIITYLSSQLTKILSSK-GERLVQFTIIQTLLIEFFKHASPDNCVDMS 325
Query: 875 EIM-QHVCNLAQDQYGNYVIQHVLEHGKPHERTTVITQLAGQIVRMSQQKFASNVVEKCL 933
E + + + + + G+ V +V+ + P R +++ L I +++ +++ + + L
Sbjct: 326 ETLGELLLPMIHSKEGSQVAYYVISYATPKTRKSIVKSLKDFIPKIASEEYGFLALVRLL 385
Query: 934 TFGSPEERQLLINEM 948
++ Q++I +
Sbjct: 386 DV--TDDTQMIIKSV 398
Score = 37 (18.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 305 SAVGSSLSRSTTPEAQLVGRSSGSGLPPVGSRVGAVEKN 343
+A ++ S+ST + ++V +S G PV + G + N
Sbjct: 6 AAKAATKSKST--QNKVVKKSIGDSKKPVSTNKGVGKDN 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1029 1005 0.00079 123 3 11 22 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 98
No. of states in DFA: 617 (66 KB)
Total size of DFA: 431 KB (2206 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 95.33u 0.10s 95.43t Elapsed: 00:00:05
Total cpu time: 95.37u 0.10s 95.47t Elapsed: 00:00:05
Start: Tue May 21 17:34:06 2013 End: Tue May 21 17:34:11 2013