Your job contains 1 sequence.
>001690
MDFDVGIEDVGIAVLQELWNRVALQAVDIASETRDVVLGKDSLQGFSRTIGELSTLMQSL
DVKKIESVIGLEFTKAALETLGAQLREAHNIIDDYKSRSRLRLLLQSNSVLSRMQHLARE
IAITISSFQLVNLEIALNLKAMTDQIVDSLRSMEFQSVAAAEAIASEIERSALQNNKNRE
NALELLRKIAEAVGASVNASLVQTELELLKQEKEELEAEKKQAEALQLTQLMQLLYSTEL
VRRPQDEAIPTYCQVYPIESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPT
CRQELLSLDLMPNLSLRSSIEEWKQREIDLRFQNAIIKINSDDQSRRKSALEEMKNIMEL
PQYAEKAAKAGLIPKLVEFLKDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQ
ICKGETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLS
HNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRLDESSIKTLKDRQFIHNVI
QMLSSNSPVCKSACLKCIKTLIAHSKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEAAE
ILALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKSEK
VRNLIESNNDAITQLFSSLDSDQPVVRRWAMRLIHCISEGNPNGVPLPPSPGKETAINTV
AAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKAIHEVICSMDGRHNGIRTP
ACQDASLLEIALAALLHFTDPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALAD
LSQSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRE
TFCLVKADAVKPLVRNLNDMESGVAEAALTALETLLADHSTLSHAIAVIVDSQGVLAILQ
VLEKGSLSAKTKALDLFQMIQKHTRITDTLLQRSERILIQLLDDDALKKKVALVLMQMNI
IPHQSSYF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001690
(1028 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 369 2.6e-37 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 360 2.1e-29 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 120 2.6e-07 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 113 2.9e-07 3
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 108 5.8e-07 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 117 6.0e-07 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 109 1.1e-06 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 141 1.4e-06 3
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 159 1.6e-06 3
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 143 3.9e-06 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 149 9.6e-06 3
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 140 1.1e-05 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 108 1.6e-05 2
ZFIN|ZDB-GENE-070424-161 - symbol:ftr55 "finTRIM family, ... 120 2.2e-05 2
CGD|CAL0002104 - symbol:orf19.6403 species:5476 "Candida ... 130 6.4e-05 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 98 7.3e-05 3
DICTYBASE|DDB_G0284845 - symbol:gxcC "armadillo repeat-co... 136 7.4e-05 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 125 9.9e-05 2
ZFIN|ZDB-GENE-050522-17 - symbol:trim35-1 "tripartite mot... 129 0.00012 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 104 0.00017 2
UNIPROTKB|C9JWN8 - symbol:TRIM5 "Tripartite motif-contain... 99 0.00055 1
ZFIN|ZDB-GENE-060825-109 - symbol:btr04 "bloodthirsty-rel... 121 0.00068 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 99 0.00073 2
ZFIN|ZDB-GENE-060825-228 - symbol:btr02 "bloodthirsty-rel... 120 0.00087 1
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 369 (135.0 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 140/543 (25%), Positives = 256/543 (47%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQR---GGK--NCPTCRQEXXXXXXXXX 313
E+ +CPL E+M DPV + G +FER+AI++ F+ G+ +CP QE
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 314 XXXRSSIEEWKQR----EIDLRFQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAAK 369
R++IEEW+ R ++D+ Q+ + N++ + AL ++ I + +
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLG-NAETDILQ--ALMHVRQICRTIRSNRHGVR 141
Query: 370 -AGLIPKLVEFLKDT--RLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICK--G 424
+ LI +++ LK T R+ +A L+ L + + D K + E VR +VK +
Sbjct: 142 NSQLIHMIIDMLKSTSHRVRYKA-LQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPS 200
Query: 425 ETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLS--QKAHDVLQNLSHN 482
+ A+ +L EL+K E L EKIG+ + ++V L +N+ N+S +KA L+N+ +
Sbjct: 201 KGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERS 260
Query: 483 THFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRLDESSIKTLKDRQFIHNVIQM 542
+MA G QP + GS ET+ MAS L + L+ + +K L + +++ +
Sbjct: 261 EEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLN-NDVKVLVAQTVGSSLVDL 319
Query: 543 LSSNSPVCKSACLKCIKTLIAHSKMVKHXXXXXXXXXXXXXXIQFVRSDPHLKHEAAEIL 602
+ S + A LK + + + K + +V + +L E+
Sbjct: 320 MRSGDMPQREAALKALNKISSFEGSAK-VLISKGILPPLIKDLFYVGPN-NLPIRLKEVS 377
Query: 603 ALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKL--CYKS-E 659
A ++ + ++ L SE+ V L LI+NT + + L +LV L C K+
Sbjct: 378 ATILANIVNIGYDFDKAT--LVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVP 435
Query: 660 KVRNLIESNNDAITQLFSSLD-SDQPVVRRWAMRLIHCISE--GNPNGVPLPPSPGKETA 716
KV I+++ AI L ++ + +R +++L+H +S L + G+ +
Sbjct: 436 KVVYAIKTSG-AIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQLGS 494
Query: 717 INTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEAL-KAIHEVICSMDGRHN 775
+ VA I +P EE++ AAG++++LP D+ + + + + A K I +V G
Sbjct: 495 L--VAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIK 552
Query: 776 GIR 778
G+R
Sbjct: 553 GMR 555
Score = 115 (45.5 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 39/147 (26%), Positives = 65/147 (44%)
Query: 889 CSVHGAACSPRETFCLVKADAVKPLVRNLNDMESGVXXXXXXXXXXXXXDHSTLSHAIAV 948
C +H CS RETFCLV+ AV+ LV L+ V D + + +
Sbjct: 653 CKIHQGICSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKI 712
Query: 949 IVDSQGVLAILQVLEKGSLSAKTKALDLFQMIQKHTRITDTLLQRSER--ILIQLLDD-- 1004
+ ++ G+ IL VL + T+ M+++ RI D + +E + L+D
Sbjct: 713 LDEADGIRHILNVLRENRTERLTRRA--VWMVERILRIEDIAREVAEEQSLSAALVDAFQ 770
Query: 1005 --DALKKKVAL-VLMQMNIIPHQSSYF 1028
D +++A L ++ IP+ SS F
Sbjct: 771 NADFRTRQIAENALKHIDKIPNFSSIF 797
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 360 (131.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 194/777 (24%), Positives = 329/777 (42%)
Query: 285 KAIQEHFQRGGK-NCPTCRQEXXXXXXXXXXXXRSSIEEWKQREIDLRFQNAIIKINSDD 343
K QE + G +CP +E R++IEEW+ R L+ A + +
Sbjct: 57 KWFQECRENGQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGN 116
Query: 344 QSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKDTRLSTEAILKC-----LYFLA 398
+ L +KN+ E+ + K + P+LV + D S+ ++C L +
Sbjct: 117 AET--NILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVV 174
Query: 399 KYSDIHKEAIVEAGAVRRIVKQICK--GETMPEAIEVLSELTKRETLGEKIGNTKDCITI 456
+ + K + E VR IVK + + + A+ VL EL+K E L EKIG+ I +
Sbjct: 175 EGDEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIIL 234
Query: 457 MVSLLHNNNPNLS--QKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMA 514
+V L + + N+S +KA L NL + +MA G QP +A GS ET+ MA
Sbjct: 235 LVGLTSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMA 294
Query: 515 SALRNMRLDESSIKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHSKMVKHXXXX 574
L + L+ + +K + + ++I ++ + + A L + + + K
Sbjct: 295 FYLGVLALN-NDVKVIVAQTVGSSLIDLMRTRDMSQREAALGALNNISSFEGSAK-LLIN 352
Query: 575 XXXXXXXXXXIQFVRSD--P-HLKHEAAEILALMVG-GCQHPQFEL--HHGLQELQSEHN 628
+ +V + P LK +A ILA +V G + + HH Q L SE
Sbjct: 353 TGILPPLIKDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHH--QTLVSEEI 410
Query: 629 VNVFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIES--NNDAITQLFSSLD-SDQPV 685
V LQL +NT E + + L +LV L V N++ + N+ AI L ++ +
Sbjct: 411 VENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDD 470
Query: 686 VRRWAMRLIHCISEGNPNGVP--LPPSPGKETAINTVAAIFTCSPDV-EERSLAAGIISQ 742
+R +++L+H IS + L + G+ ++ V+ I +P + EE++ AAG++++
Sbjct: 471 LRLASIKLLHNISPHMSEELANALRSTVGQLGSL--VSIISENTPTITEEQAAAAGLLAE 528
Query: 743 LPKDDIYVDEVLCKSEAL-KAIHEVICSMDGRHNGIRTPACQDXXXXXXXXXXXXHFTDP 801
LP+ D+ + L + A K I +++ G GIR T
Sbjct: 529 LPERDLVLTMRLLREGAFEKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKE 588
Query: 802 TKPELQRQVGKLEVYPSL-IRVLSTGSSLAKQRA-ASALADLSQSTSVSVSNATLTAKQT 859
T L L PSL + +L + S QRA A+AL +LS + + LT +
Sbjct: 589 TDATLFCCEKNL---PSLFLDLLQSNSQDNIQRASATALENLS------LESKNLT--KI 637
Query: 860 KTLMPMFDMTKXXXXXXXXXXXXGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLND 919
L P G C +H CS RE+FCLV+ AV LV L+
Sbjct: 638 PELPPPTYCVSIFSCLSKPPVVLG----ICKIHQGICSVRESFCLVEGQAVDKLVDLLDH 693
Query: 920 MESGVXXXXXXXXXXXXXDHSTLSHAIAVIVDSQGVLAILQVL-EKGSLSAKTKALDLFQ 978
V D + + +I ++ G+ IL VL E + + + +A+
Sbjct: 694 ENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRTENLRIRAV---W 750
Query: 979 MIQKHTRITDTLLQRSER--ILIQLLDD----DALKKKVA-LVLMQMNIIPHQSSYF 1028
M+++ RI + + E + L+D D +++A L ++ IP+ S F
Sbjct: 751 MVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIPNFSGIF 807
Score = 318 (117.0 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 120/439 (27%), Positives = 199/439 (45%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKN-----CPTCRQEXXXXXXXXX 313
E+ +CPL ++M +PV + G +FER+AI++ FQ +N CP +E
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 314 XXXRSSIEEWKQREIDLRFQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLI 373
R++IEEW+ R L+ A + + + L +KN+ E+ + K +
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAET--NILLALKNVREICRNIRKIRQRVCN 144
Query: 374 PKLVEFLKDTRLSTEAILKC-----LYFLAKYSDIHKEAIVEAGAVRRIVKQICK--GET 426
P+LV + D S+ ++C L + + + K + E VR IVK + + +
Sbjct: 145 PQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKG 204
Query: 427 MPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLS--QKAHDVLQNLSHNTH 484
A+ VL EL+K E L EKIG+ I ++V L + + N+S +KA L NL +
Sbjct: 205 REAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEE 264
Query: 485 FAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRLDESSIKTLKDRQFIHNVIQMLS 544
+MA G QP +A GS ET+ MA L + L+ + +K + + ++I ++
Sbjct: 265 NVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALN-NDVKVIVAQTVGSSLIDLMR 323
Query: 545 SNSPVCKSACLKCIKTLIAHSKMVKHXXXXXXXXXXXXXXIQFVRSD--P-HLKHEAAEI 601
+ + A L + + + K + +V + P LK +A I
Sbjct: 324 TRDMSQREAALGALNNISSFEGSAK-LLINTGILPPLIKDLFYVGPNQLPIRLKEVSATI 382
Query: 602 LALMVG-GCQHPQFEL--HHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKS 658
LA +V G + + HH Q L SE V LQL +NT E + + L +LV L
Sbjct: 383 LANIVNIGYDFDKVPVGPHH--QTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCP 440
Query: 659 EKVRNLIES--NNDAITQL 675
V N++ + N+ AI L
Sbjct: 441 NSVINVVSAIRNSAAIISL 459
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 120 (47.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRS 318
E CPL NELM DPV + G ++++ IQ+ G + CP +Q R
Sbjct: 76 EEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIRE 135
Query: 319 SIEEW-KQREIDLRFQNAIIKINSDDQSRR 347
I +W K+ ++ + Q +N D+ R
Sbjct: 136 MISKWCKKNGLETKSQYHPNLVNEDETVTR 165
Score = 81 (33.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 430 AIEVLSELTKRETLGEKI-GNTKDCITIMVS-LLHNNNPN--LSQKAHDVLQNLS-HNTH 484
A + L LT++ T + G + D IT +V+ LLH +NP+ L + L N+S H+
Sbjct: 189 AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 248
Query: 485 FAVKMAEAGYFQPF-VACFNRGSQETRALMASALRNMRLDESSIKTLKDRQFIHNVIQML 543
+ E P + RG+ TR+ A+A+ + +S+ + + +I +L
Sbjct: 249 NKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLL 308
Query: 544 SSNSPVCKSACLKCIKTL-IAH 564
+P+ I TL IAH
Sbjct: 309 EEGNPLAIKDVAAAIFTLCIAH 330
Score = 65 (27.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 369 KAGLIPKLVEFLKDTR-LSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETM 427
K+G++ L++ L++ L+ + + ++ L + A+ + GAVR + K+I G +
Sbjct: 297 KSGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRD-GAVRVLGKKISNGLYV 355
Query: 428 PEAIEVLSELTKRETLGEKIG 448
E + +L+ L E++G
Sbjct: 356 DELLAILAMLVTHWKAVEELG 376
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 20/104 (19%), Positives = 47/104 (45%)
Query: 331 RFQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAA--KAGLIPKLVEFLKDTRLSTE 388
R N ++ ++ D+ ++ + + NI +K +IP L++ L+ ++T
Sbjct: 216 RLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATR 275
Query: 389 AILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETMPEAIE 432
+ F D +K I ++G ++ ++ + +G P AI+
Sbjct: 276 SNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGN--PLAIK 317
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 113 (44.8 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 263 CPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEE 322
CP+ ELM+DPV + G ++ER I++ G CPT +Q+ RS I +
Sbjct: 279 CPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQ 338
Query: 323 W 323
W
Sbjct: 339 W 339
Score = 86 (35.3 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 40/159 (25%), Positives = 67/159 (42%)
Query: 364 AEKAAKAGLIPKLVEFLKDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICK 423
+E+A L+ KL DT A + L LAK + ++ I EAGA+ ++ +
Sbjct: 364 SERANIDALLSKLCS--PDTEEQRSAAAE-LRLLAKRNANNRICIAEAGAIPLLLSLLSS 420
Query: 424 GE--TMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSH 481
+ T A+ L L+ E I ++ + +V +L N + + A L +LS
Sbjct: 421 SDLRTQEHAVTALLNLSIHEDNKASIISS-GAVPSIVHVLKNGSMEARENAAATLFSLSV 479
Query: 482 NTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNM 520
+ V + G V GSQ + A+AL N+
Sbjct: 480 IDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNL 518
Score = 85 (35.0 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 41/146 (28%), Positives = 64/146 (43%)
Query: 338 KINSDDQSRRKSALEEMKNIMELPQYAEKA-AKAGLIPKLVEFLKDTRLST-EAILKCLY 395
K+ S D ++SA E++ + + A+AG IP L+ L + L T E + L
Sbjct: 375 KLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALL 434
Query: 396 FLAKYSDIHKEAIVEAGAVRRIVKQICKG--ETMPEAIEVLSELTKRETLGEKIGNTKDC 453
L+ + D +K +I+ +GAV IV + G E A L L+ + IG
Sbjct: 435 NLSIHED-NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGM-GA 492
Query: 454 ITIMVSLLHNNNPNLSQKAHDVLQNL 479
I +V LL + + A L NL
Sbjct: 493 IPALVVLLGEGSQRGKKDAAAALFNL 518
Score = 70 (29.7 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 702 PNGVPLPPSPGKETAINTVAAIFT--CSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEA 759
PN P P E A + A+ + CSPD EE+ AA + L K + + +C +EA
Sbjct: 354 PNK-PTPACSSSERA--NIDALLSKLCSPDTEEQRSAAAELRLLAKRN--ANNRICIAEA 408
Query: 760 LKAIHEVICSMDGRHNGIRTPACQDXXXXXXXXXXXXHFTDPTKPELQRQVGKLEVYPSL 819
AI ++ + + +RT Q+ H + K + G + PS+
Sbjct: 409 -GAIPLLLSLLSS--SDLRT---QEHAVTALLNLSI-H--EDNKASIISS-GAV---PSI 455
Query: 820 IRVLSTGSSLAKQRAASALADLS 842
+ VL GS A++ AA+ L LS
Sbjct: 456 VHVLKNGSMEARENAAATLFSLS 478
Score = 69 (29.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 31/145 (21%), Positives = 60/145 (41%)
Query: 410 EAGAVRRIVKQICKGETMPEAIEVLSELTKRETLGEKIGNTKDCIT------IMVSLLHN 463
E + ++ ++C P+ E S + L ++ N + CI +++SLL +
Sbjct: 365 ERANIDALLSKLCS----PDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSS 420
Query: 464 NNPNLSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMR-L 522
++ + A L NLS + + +G V GS E R A+ L ++ +
Sbjct: 421 SDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVI 480
Query: 523 DESSIKTLKDRQFIHNVIQMLSSNS 547
DE + T+ I ++ +L S
Sbjct: 481 DEYKV-TIGGMGAIPALVVLLGEGS 504
Score = 64 (27.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 37/162 (22%), Positives = 66/162 (40%)
Query: 336 IIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKD-TRLSTEAILKCL 394
++ + Q +K A + N+ +A +AGL+P ++ + + T + + L
Sbjct: 497 VVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAIL 556
Query: 395 YFLAKYSDIHKEAIVEAGAVRRIVKQICKG--ETMPEAIEVLSELTKRETLGEKIGNTKD 452
L+ + + K AI A V +V+ I G A V+ L E + ++
Sbjct: 557 SILSSHPE-GKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQE 615
Query: 453 CITIMVSLLH---NNNPNLSQKAHDVLQNLSHNTHFAVKMAE 491
C IMV L N +KA +L+ +S F V+ E
Sbjct: 616 C-GIMVPLRELALNGTDRGKRKAVQLLERMSR---FLVQQQE 653
Score = 51 (23.0 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 804 PELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALADL 841
PE + +G E P L+ ++ +G+ ++ AA+ + L
Sbjct: 563 PEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHL 600
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 108 (43.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 47/197 (23%), Positives = 86/197 (43%)
Query: 336 IIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKDTRLSTEAILKCLY 395
++K ++++ SA + ++ + +Y + +AG I LV+ L LS +
Sbjct: 512 VLKTGYLEEAKANSAAT-LFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATAL 570
Query: 396 FLAKYSDIHKEAIVEAGAVRRIVKQICKGETMPE-AIEVLSEL-TKRE---TLGEKIGNT 450
F +K ++EAGAVR +V+ + M E A+ VL+ L T RE +GE+ G
Sbjct: 571 FNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGG-- 628
Query: 451 KDCITIMVSLLHNNNPNLSQKAHDVLQNL-SHNTHFAVKMAEAGYFQPFVACFNRGSQET 509
I ++V ++ + + A L L +H+ F + G P VA G+
Sbjct: 629 ---IPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARG 685
Query: 510 RALMASALRNMRLDESS 526
+ + L+ + S
Sbjct: 686 KEKAQNLLKYFKAHRQS 702
Score = 95 (38.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 23/71 (32%), Positives = 28/71 (39%)
Query: 253 CQVYPIESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXX 312
C V C L ELM DPV + G +FER IQ+ G CP RQ
Sbjct: 236 CPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTP 295
Query: 313 XXXXRSSIEEW 323
R+ + W
Sbjct: 296 NFIVRAFLASW 306
Score = 93 (37.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 51/205 (24%), Positives = 87/205 (42%)
Query: 368 AKAGLIPKLVEFL--KDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKG- 424
A+ IP LV L D R+ +A+ CL L+ +D +K I E+GA+ ++ + G
Sbjct: 460 ARCEAIPSLVSLLYSTDERIQADAVT-CLLNLS-INDNNKSLIAESGAIVPLIHVLKTGY 517
Query: 425 --ETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHN 482
E + L L+ E +IG I +V LL + + + + A L NLS +
Sbjct: 518 LEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNLSIH 576
Query: 483 THFAVKMAEAGYFQPFVACFNR--GSQETRALMASALRNMRLDESSIKTLKDRQFIHNVI 540
K+ EAG + V + G E ++ + L +R E I + + I ++
Sbjct: 577 HENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVR--EGKI-AIGEEGGIPVLV 633
Query: 541 QMLSSNSPVCKSACLKCIKTLIAHS 565
+++ S K + L HS
Sbjct: 634 EVVELGSARGKENATAALLQLCTHS 658
Score = 83 (34.3 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 33/141 (23%), Positives = 59/141 (41%)
Query: 425 ETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTH 484
+T EA + L + T + + I +VSLL++ + + A L NLS N +
Sbjct: 436 DTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDN 495
Query: 485 FAVKMAEAGYFQPFVACFNRGS-QETRALMASALRNMRLDESSIKTLKDRQFIHNVIQML 543
+AE+G P + G +E +A A+ L ++ + E + + I ++ +L
Sbjct: 496 NKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLL 555
Query: 544 SSNSPVCKSACLKCIKTLIAH 564
S S K + L H
Sbjct: 556 GSGSLSGKKDAATALFNLSIH 576
Score = 73 (30.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 35/164 (21%), Positives = 69/164 (42%)
Query: 373 IPKLVEFLKDTRLST--EAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGET--MP 428
+ KL++ LK + L T EA + + LA+ S ++ I A+ +V + +
Sbjct: 423 VKKLIDDLKSSSLDTQREATAR-IRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQA 481
Query: 429 EAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVK 488
+A+ L L+ + I + + ++ L + L +LS + +
Sbjct: 482 DAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTE 541
Query: 489 MAEAGYFQPFVACFNRGSQETRALMASALRNMRLD-ESSIKTLK 531
+ EAG +P V GS + A+AL N+ + E+ K ++
Sbjct: 542 IGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIE 585
Score = 49 (22.3 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 810 VGKLEVYPSLIRVLSTGSSLAKQRAASALADL 841
+G+ P L+ V+ GS+ K+ A +AL L
Sbjct: 623 IGEEGGIPVLVEVVELGSARGKENATAALLQL 654
Score = 39 (18.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 705 VPLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQL 743
V L + GKE A + + T SP + G+I L
Sbjct: 636 VELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPL 674
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 117 (46.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 239 ELVRRPQDEAIPTYCQVYPIESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNC 298
++V + DE+ + P++ L CP+ ELM+DPV + G ++ER IQ G C
Sbjct: 224 KMVNKNTDESKKSDKLTIPVDFL-CPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTC 282
Query: 299 PTCRQEXXXXXXXXXXXXRSSIEEW-KQREID--LRFQNAIIKINSDDQSRRKSALEEMK 355
P +Q+ RS I W + I+ + N K NS D S ++ ++ +
Sbjct: 283 PKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTK-NSGDMSVIRALVQRLS 341
Query: 356 N 356
+
Sbjct: 342 S 342
Score = 84 (34.6 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 43/154 (27%), Positives = 70/154 (45%)
Query: 335 AIIKINSDDQSR-RKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKDT---RLSTEAI 390
A++ + + R +K A + N+ +A +AG++ LV+ L D+ R+ EA
Sbjct: 459 ALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEA- 517
Query: 391 LKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETM--PEAIEVLSELTKRETLGEK-- 446
L L LA D K AIV+A + ++ + +T A +L L KR+T EK
Sbjct: 518 LTILSVLANNQDA-KSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDT--EKLI 574
Query: 447 -IGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNL 479
IG + +M L N +KA +L+ L
Sbjct: 575 TIGRLGAVVPLM-DLSKNGTERGKRKAISLLELL 607
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/157 (21%), Positives = 65/157 (41%)
Query: 370 AGLIPKLVEFLKD-TRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQIC---KGE 425
+G IP LV+ L++ T + L+ L Y +K V AG V +VK + +
Sbjct: 454 SGAIPALVDLLENGTPRGKKDAATALFNLCIYHG-NKGRAVRAGIVTALVKMLSDSTRHR 512
Query: 426 TMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNL-SHNTH 484
+ EA+ +LS L + I + + ++ +L + + A +L +L +T
Sbjct: 513 MVDEALTILSVLANNQDAKSAIVKA-NTLPALIGILQTDQTRNRENAAAILLSLCKRDTE 571
Query: 485 FAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMR 521
+ + G P + G++ + S L +R
Sbjct: 572 KLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
Score = 72 (30.4 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 410 EAGAVRRIVKQICKGETMPE--AIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPN 467
+ +R +V+++ T A+ + L+KR T + I ++V+LL + +
Sbjct: 329 DMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVA 388
Query: 468 LSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRL-DESS 526
+ A + NLS + + AG V G+ E R A+ L ++ L DE+
Sbjct: 389 TQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENK 448
Query: 527 IKTLKDRQFIHNVIQMLSSNSP 548
I + I ++ +L + +P
Sbjct: 449 I-IIGGSGAIPALVDLLENGTP 469
Score = 58 (25.5 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 33/153 (21%), Positives = 62/153 (40%)
Query: 397 LAKYSDIHKEAIVEAGAVRRIVKQICKGE--TMPEAIEVLSELTKRETLGEKIGNTKDCI 454
L+K S ++ I EAGA+ +V + + T AI + L+ E E I +
Sbjct: 358 LSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELI-MFAGAV 416
Query: 455 TIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMA 514
T +V +L + A L +LS + + +G V G+ + A
Sbjct: 417 TSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAA 476
Query: 515 SALRNMRLDESSIKTLKDRQFIHNVIQMLSSNS 547
+AL N+ + + + +++MLS ++
Sbjct: 477 TALFNLCIYHGNKGRAVRAGIVTALVKMLSDST 509
Score = 54 (24.1 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 812 KLEVYPSLIRVLSTGSSLAKQRAASALADLSQSTSVSVSNATLTAKQTKTLMPMFDMTK 870
K P+LI +L T + ++ AA+ L L + + + +T + ++P+ D++K
Sbjct: 536 KANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKL----ITIGRLGAVVPLMDLSK 590
Score = 42 (19.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 955 VLAILQVLEKGSLSAKTKALDLFQMIQK 982
V+ ++ + + G+ K KA+ L ++++K
Sbjct: 582 VVPLMDLSKNGTERGKRKAISLLELLRK 609
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 414 VRRIVKQICKG--ETMPEAIEVLSELTKRETLGE-KIGNTKDCITIMVSLLHNNNPNLSQ 470
V+++V+++ +T +A L L K IGN+ I ++V LL++ + +
Sbjct: 546 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELLYSTDSATQE 604
Query: 471 KAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMR-LDESSIKT 529
A L NLS N + +A+AG +P + GS E + A+ L ++ ++E+ IK
Sbjct: 605 NAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIK- 663
Query: 530 LKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHSK 566
+ I ++ +L + +P K + L H +
Sbjct: 664 IGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQE 700
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/157 (22%), Positives = 72/157 (45%)
Query: 373 IPKLVEFLKDTRLSTEAILKC-LYFLAKYSDIHKEAIVEAGAVRRIVKQICKGE--TMPE 429
+ KLVE LK + L T+ L LAK++ ++ I +GA+ +V+ + + T
Sbjct: 546 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQEN 605
Query: 430 AIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKM 489
A+ L L+ + + I + I ++ +L N + + + L +LS +K+
Sbjct: 606 AVTALLNLSINDNNKKAIADA-GAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKI 664
Query: 490 AEAGYFQPFVACFNRGSQETRALMASALRNMRLDESS 526
++G P V G+ + A+AL N+ + + +
Sbjct: 665 GQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQEN 701
Score = 95 (38.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 327 EIDLRFQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKA-AKAGLIPKLVEFLKDTRL 385
E++ + + + ++ S ++ A E++ + + +G I LVE L T
Sbjct: 541 EVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDS 600
Query: 386 ST-EAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKG--ETMPEAIEVLSELTKRET 442
+T E + L L+ +D +K+AI +AGA+ ++ + G E + L L+ E
Sbjct: 601 ATQENAVTALLNLS-INDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEE 659
Query: 443 LGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKMAEAG 493
KIG + I +V LL N P + A L NLS + + ++G
Sbjct: 660 NKIKIGQS-GAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSG 709
Score = 93 (37.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 263 CPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEE 322
CPL E+M DPV + G ++E+ I+ G K CP RQ ++ I
Sbjct: 239 CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIAN 298
Query: 323 W-KQREIDLRFQNAIIKIN 340
W + ++ L N +N
Sbjct: 299 WCETNDVKLPDPNKSTSLN 317
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/188 (23%), Positives = 82/188 (43%)
Query: 340 NSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKD-TRLSTEAILKCLYFLA 398
N +++ SA + ++ + + K ++G I LV+ L + T + L+ L+
Sbjct: 638 NGSSEAKENSAAT-LFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLS 696
Query: 399 KYSDIHKEAIVEAGAVRRIVKQICKGETMPE-AIEVLSELTKRETLGEKIGNTKDCITIM 457
+ + +K IV++GAVR ++ + M + A+ VL+ L IG + I ++
Sbjct: 697 IHQE-NKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLL 754
Query: 458 VSLLHNNNPNLSQKAHDVLQNLSHNT-HFAVKMAEAGYFQPFVACFNRGSQETRA---LM 513
V ++ + + A L LS N+ F + + G P VA G+ R +
Sbjct: 755 VEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQAL 814
Query: 514 ASALRNMR 521
S RN R
Sbjct: 815 LSYFRNQR 822
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 141 (54.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 64/285 (22%), Positives = 118/285 (41%)
Query: 238 TELVRRPQDEAIPTYCQVYPIESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKN 297
+ +V R + IP Y + CP+ ELM+DPV + G ++ER +IQ+ G K
Sbjct: 237 SRIVSRHRSPVIPEYFR--------CPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKT 288
Query: 298 CPTCRQEXXXXXXXXXXXXRSSIEEWKQREIDLRFQNAIIKINSDDQSRRKSALEEMKNI 357
CP ++ +S I W + N I ++ + S R + + +
Sbjct: 289 CPKSQETLLHAGLTPNYVLKSLIALWCE-------SNGI-ELPQNQGSCRTTKIGGSSS- 339
Query: 358 MELPQYAEKAAKAGLIPKLVEFLKDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRI 417
++ L+ KL + + + L+ LAK + ++ I EAGA+ +
Sbjct: 340 ----SDCDRTFVLSLLEKLANGTTEQQRAAAGELR---LLAKRNVDNRVCIAEAGAIPLL 392
Query: 418 VKQICKGE--TMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDV 475
V+ + + T ++ L L+ E I + IT +V +L N + + A
Sbjct: 393 VELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDA-GAITDIVEVLKNGSMEARENAAAT 451
Query: 476 LQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNM 520
L +LS V + AG Q ++ G++ + A+A+ N+
Sbjct: 452 LFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNL 496
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 802 TKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASAL 838
T E + + + E P L+ ++ TGS ++ AA+ L
Sbjct: 539 TNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAIL 575
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 956 LAILQVLEKGSLSAKTKALDLFQMIQK 982
+A+ ++ E G+ AK KA L ++IQ+
Sbjct: 596 VALKELTENGTDRAKRKAASLLELIQQ 622
Score = 48 (22.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 808 RQVGKLEVYPSLIRVLSTGSSLAKQRAASALADLSQSTSVSVS 850
R+VG +V +L + G+ AK++AAS L + Q+ V+V+
Sbjct: 590 REVGA-DV--ALKELTENGTDRAKRKAASLLELIQQTEGVAVT 629
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 159 (61.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 77/343 (22%), Positives = 149/343 (43%)
Query: 232 MQLLYSTELVRRPQ-DEAIPTYCQVYPIESLVCPLCNELMEDPVAIVCGHSFERKAIQEH 290
+Q L +T+++ +P ++AI + +CP+ E+M DPV I G ++E+++IQ+
Sbjct: 264 LQGLEATDILYQPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKW 323
Query: 291 FQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEEWKQREIDLRFQNAIIKINSDDQSRRKSA 350
F G K CP RQE ++ I +W ++ F+ +++ D Q+ +K
Sbjct: 324 FDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKN---NFKIPEKEVSPDSQNEQKDE 380
Query: 351 LEEMKNIMELPQYAEKAAKAGLIPKLVEFLKDTR--LSTEAILKCLYFLAKYSD--IHKE 406
+ + + Q E+ + L + R ++ + L L Y D I +
Sbjct: 381 VSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQEN 440
Query: 407 AIVEAG--AVRRIVKQICKGE-TMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHN 463
A+ ++ + K++ E +P IE+L E RE N+ + +S+L
Sbjct: 441 AVTTLLNLSIDEVNKKLISNEGAIPNIIEIL-ENGNREARE----NSAAAL-FSLSMLDE 494
Query: 464 NNPN--LSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMR 521
N LS ++ L H T K A F + N+G + A + L N+
Sbjct: 495 NKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKG-RAIDAGIVQPLLNL- 552
Query: 522 LDESSIKTLKDRQFIHNVIQMLSSNSPVCKSAC--LKCIKTLI 562
L + ++ + + +++ +L+S+ P + A L I+TL+
Sbjct: 553 LKDKNLGMIDEAL---SILLLLASH-PEGRQAIGQLSFIETLV 591
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 958 ILQVLEKGSLSAKTKALDLFQMIQKHTRI 986
++++ G+ A+ KA L Q+I K +I
Sbjct: 632 LVEITTSGTNRAQRKANALIQLISKSEQI 660
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 31 SETRDVVLGKDSLQGFSRTIGEL--STLMQSLDVK-KIESVIGLEFTKAALETL 81
++T+D+ L D + FS+T S +++ L K +++++ L+ A+++L
Sbjct: 186 TDTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSL 239
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 143 (55.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 71/298 (23%), Positives = 126/298 (42%)
Query: 263 CPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEE 322
CP+ +LM DPV G +++R +I + + G CP Q RS I +
Sbjct: 303 CPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQ 362
Query: 323 WKQREIDLRFQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKD 382
W L++ + +++ + +A + ME A KA A + LV L+D
Sbjct: 363 WCG-VYGLQYDSPE---SNEGMAECVAASCSSRAAME----ANKAT-ARI---LVRMLED 410
Query: 383 TRLSTEAIL-KCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETMPE--AIEVLSELTK 439
+ +A+ K + LAK ++ I + GA+ + + + + M + A+ L L+
Sbjct: 411 GSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSI 470
Query: 440 RETLGEKIGNTKDCITIMVSLLHNN-NPNLSQKAHDVLQNLS--HNTHFAVKMAEAGYFQ 496
E +I + C+ ++V +L N + A L +LS HN + M E G +
Sbjct: 471 FEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLI-MNEPGAVE 529
Query: 497 PFVACFNRGSQETRALMASALRNMRLD-ESSIKTLKDRQFIHNVIQMLSSNSPVCKSA 553
+ +G+ + AL N+ ESS + L+ + +IQ L N V + A
Sbjct: 530 ELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVA-LIQSLR-NDTVSEEA 585
Score = 51 (23.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 803 KPELQRQVGKLE-VYPSLIRVLSTGSSLAKQRAASALADL 841
+P + VG E V SL+ ++ G+ K+ A SAL ++
Sbjct: 595 QPSIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEI 634
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 149 (57.5 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 80/351 (22%), Positives = 140/351 (39%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRS 318
E +CP+ ELM+DP + G ++ER IQ G +CP +Q+ RS
Sbjct: 245 EDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRS 304
Query: 319 SIEEW-KQREIDLR--FQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPK 375
I +W + I+ + N K NSD R S + +A L+ K
Sbjct: 305 LISQWCTKHNIEQPGGYMNGRTK-NSDGSFRDLSG--------------DMSAIRALVCK 349
Query: 376 LV-EFLKDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKG---ETMPEAI 431
L + ++D R + I L+K S ++ I EAGA+ +VK + ET A+
Sbjct: 350 LSSQSIEDRRTAVSEIRS----LSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAV 405
Query: 432 EVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKMAE 491
+ L+ E E I +T +V +L + + A L +LS + +
Sbjct: 406 TCILNLSIYEHNKELI-MLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGA 464
Query: 492 AGYFQPFVACFNRGSQETRALMASALRNMRLDESSIKTLKDRQFIHNVIQMLSSNSPVCK 551
+G V GS + A+AL N+ + + + + +++ML+ +S
Sbjct: 465 SGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERM 524
Query: 552 SACLKCIKTLIAHSKMVKHXXXXXXXXXXXXXXIQFVRSDPHLKHEAAEIL 602
+ I +++A +++ K +Q + P + AA IL
Sbjct: 525 ADEALTILSVLASNQVAKTAILRANAIPPLIDCLQ--KDQPRNRENAAAIL 573
Score = 41 (19.5 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 670 DAITQLFSSLDSDQPVVRRWAMRLIHCI 697
+AI L L DQP R A ++ C+
Sbjct: 549 NAIPPLIDCLQKDQPRNRENAAAILLCL 576
Score = 41 (19.5 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 810 VGKLEVYPSLIRVLSTGSSLAKQRAASALADLSQST 845
+G+L L+ + G+ AK++A S L L +S+
Sbjct: 587 IGRLGAVVPLMELSRDGTERAKRKANSLLELLRKSS 622
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 75/353 (21%), Positives = 134/353 (37%)
Query: 263 CPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEE 322
CP+ E+M DPV + G ++ER I++ + G CP +Q RS I +
Sbjct: 262 CPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQ 321
Query: 323 WKQREIDLRFQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKD 382
W + N + + S+L K + AE L+ +L +
Sbjct: 322 W-------------CEANDIEPPKPPSSLRPRK-VSSFSSPAEANKIEDLMWRLAYGNPE 367
Query: 383 TRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGET--MPEAIEVLSELTKR 440
+ S ++ LAK + ++ AI EAGA+ +V + ++ ++ L L+
Sbjct: 368 DQRSAAGEIR---LLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSIC 424
Query: 441 ETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVA 500
E I + I +V +L + + A L +LS V + G P V
Sbjct: 425 ENNKGAIVSA-GAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVV 483
Query: 501 CFNRGSQETRALMASALRNMRLDESSIKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKT 560
N G+Q + A+AL N+ + + + I + ++L+ L +
Sbjct: 484 LLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAI 543
Query: 561 LIAHSKMVKHXXXXXXXXXXXXXXIQFVRS-DPHLKHEAAEILA-LMVGGCQH 611
L +H + ++F+R+ P + AA +L L G QH
Sbjct: 544 LSSHPE----GKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQH 592
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRS 318
E C L +M DPV I G++FER IQ+ F G +CP +++ +S
Sbjct: 221 EKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELKS 280
Query: 319 SIEEW 323
I EW
Sbjct: 281 QISEW 285
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 38/176 (21%), Positives = 74/176 (42%)
Query: 352 EEMKNIMEL----PQYAEKAAKAGLIPKLVEFLKDT--RLSTEAILKCLYFLAKYSDIHK 405
EE NI+E+ P K +G + L++ ++ L +A++ L L+ +I
Sbjct: 480 EEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMIT-LKNLSSSMEICL 538
Query: 406 EAIVEAGAVRRIVKQICKGETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNN 465
E +V ++++ + + +I +L L E I T DC+ + LL +N
Sbjct: 539 E-MVSLDFIQKLTSFLQQKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNV 597
Query: 466 PNLSQKAHDVLQNLSHNT--HFAVKMAEA-GYFQPFVACFNRGSQETRALMASALR 518
P + A +L L + + + EA + + N G++E + + LR
Sbjct: 598 PEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLR 653
>ZFIN|ZDB-GENE-070424-161 [details] [associations]
symbol:ftr55 "finTRIM family, member 55"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-161 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:BX322664
GeneTree:ENSGT00670000097622 IPI:IPI00630920
Ensembl:ENSDART00000019843 Uniprot:F1Q547
Length = 531
Score = 120 (47.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHF-QRGGKNCPTCRQ 303
E VCP+C +L++DPV I CGHS+ I E + Q+ +CP CRQ
Sbjct: 9 EQFVCPVCLDLLKDPVTIPCGHSYCMSCITEFWDQKSIYSCPQCRQ 54
Score = 64 (27.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 938 DHSTLSHAIAVIVDSQGVLAILQVLEKGSLSAKTKAL-DLFQMIQKHTRITDTLLQRSER 996
+H T+S A+A + +++ L Q K K KA+ L + I+ H R T T ++ R
Sbjct: 178 NHHTVS-AVAKMAENESRLKEKQRAIKERTEQKQKAIKQLREAIESHKRSTQTTVEDCTR 236
Query: 997 ILIQLL 1002
+ +L+
Sbjct: 237 VFTELI 242
>CGD|CAL0002104 [details] [associations]
symbol:orf19.6403 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0000774
"adenyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=IEA] InterPro:IPR016024
CGD:CAL0002104 SUPFAM:SSF48371 GO:GO:0015031 GO:GO:0005788
PROSITE:PS00014 EMBL:AACQ01000073 EMBL:AACQ01000072 KO:K14001
RefSeq:XP_716159.1 RefSeq:XP_716242.1 GeneID:3642082 GeneID:3642216
KEGG:cal:CaO19.13761 KEGG:cal:CaO19.6403 eggNOG:NOG284817
Uniprot:Q5A360
Length = 414
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 50/210 (23%), Positives = 89/210 (42%)
Query: 462 HNNNPNLSQKAHDVLQNLSHNTHFAVKM-AEAGYFQPFVACFNRGS-----QETRALMAS 515
H ++ A D L+ LSH+ F VK+ ++ FQ V N S ++ +M S
Sbjct: 150 HESDVERLHLALDTLEELSHDIEFGVKLTSDKAIFQSLVNIANGASDPKITEKVYRVMGS 209
Query: 516 ALRNMRLDESSIKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHSKMVKHXXXXX 575
+LRN S+I T D+ ++ N+ + L++ + V + L I+ L+ +S V+
Sbjct: 210 SLRNNPEAISNILTNFDKSYVDNLFEQLANENDVLQKRILGIIQALVQNSHFVRQYFSFD 269
Query: 576 XXXXXXXXXIQFVRSDPHLKHEAAEILALMVGGCQHPQFELHHGLQELQSEHNVNVFLQ- 634
F + P+ K A+ IL + P L++ E V+ F+Q
Sbjct: 270 HSSGLNDLIAIFPKLGPNSKSRASNILEDLQ---LFPVTNDRRSLEDQDPESQVSKFIQN 326
Query: 635 -LIANTERETKIQ-FLHLLVKLCYKSEKVR 662
+ N E + + LV L ++ +R
Sbjct: 327 SFVGNKLDEKNFKSYFDQLVNLHQSNKSLR 356
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 98 (39.6 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 263 CPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEE 322
CPL ELM DPV + G +F+R +I++ G CP RQ ++ I
Sbjct: 244 CPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMIAS 303
Query: 323 WKQ-REIDLRFQNAIIKINSDDQS 345
W + I+L N+ + + D S
Sbjct: 304 WLEANRINLA-TNSCHQYDGGDAS 326
Score = 84 (34.6 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 369 KAGLIPKLVEFL-KDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETM 427
+ G I L+ L + +L+ E + L L+ S+++K IVE GA+ +V + G
Sbjct: 512 RCGAITPLLSLLYSEEKLTQEHAVTALLNLS-ISELNKAMIVEVGAIEPLVHVLNTGNDR 570
Query: 428 PEAIEVLS--ELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLS--HNT 483
+ S L+ + E+IG + I +V+LL + A L NLS H+
Sbjct: 571 AKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDN 630
Query: 484 HFAVKMAEA 492
+ A+A
Sbjct: 631 KARIVQAKA 639
Score = 75 (31.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 43/190 (22%), Positives = 83/190 (43%)
Query: 339 INSDDQSRRKSALEEMKNIMELPQYAEKAAKAGL-IPKLVEFL-KDTRLSTEAILKCLYF 396
+N+ + ++++ + ++ L E+ ++ I LV L K T + L+
Sbjct: 564 LNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFN 623
Query: 397 LAKYSDIHKEAIVEAGAVRRIVKQICKG-ETMPEAIEVLSELTKRETLGEKIGNTKDCIT 455
L+ D +K IV+A AV+ +V+ + E + +A+ +L+ L+ G + + I
Sbjct: 624 LSITHD-NKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGE-GRQAIVREGGIP 681
Query: 456 IMVSLLHNNNPNLSQKAHDVLQNLSHNT-HFAVKMAEAGYFQPFVACFNRGSQ---ETRA 511
++V + + + A VL L N+ F + + G P VA G+Q E
Sbjct: 682 LLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQ 741
Query: 512 LMASALRNMR 521
+ S RN R
Sbjct: 742 QLLSHFRNQR 751
Score = 46 (21.3 bits), Expect = 7.3e-05, Sum P(3) = 7.3e-05
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 817 PSLIRVLSTGSSLAKQRAASALADL 841
P L+ + GS K+ AAS L L
Sbjct: 681 PLLVETVDLGSQRGKENAASVLLQL 705
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 817 PSLIRVLSTGSSLAKQRAASALA 839
P L+ + +G+ AK++A L+
Sbjct: 723 PPLVALSQSGTQRAKEKAQQLLS 745
>DICTYBASE|DDB_G0284845 [details] [associations]
symbol:gxcC "armadillo repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000219
InterPro:IPR001849 InterPro:IPR016024 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50176 SMART:SM00185 SMART:SM00233 SMART:SM00325
dictyBase:DDB_G0284845 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GenomeReviews:CM000153_GR GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0035023 InterPro:IPR006911
Pfam:PF04826 EMBL:AAFI02000072 RefSeq:XP_638371.1
ProteinModelPortal:Q54P24 STRING:Q54P24 PRIDE:Q54P24
EnsemblProtists:DDB0191188 GeneID:8624804 KEGG:ddi:DDB_G0284845
InParanoid:Q54P24 OMA:ARNTHNE Uniprot:Q54P24
Length = 1215
Score = 136 (52.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 351 LEEMKNIMELPQYAEKAAKAGLIPKLVEFLKD---TRLSTEAIL-KCLYFLAKYSDIHK- 405
L ++N++ + AK+G+I KLV K T + ++IL K ++ I +
Sbjct: 331 LTVIQNLVSEENLIDTVAKSGIIAKLVGATKGMPLTNTTHQSILVKASCIISALITIEEV 390
Query: 406 -EAIVEAGAVRRIVK--QICKGETMPEAIEVLSELTKR-ETLGEKIGNTKDCITIMVSLL 461
+A VE G + +V+ Q+ E EA L+ T + + +IG + + + V LL
Sbjct: 391 QQAAVEQGVITLLVEMIQLPSAEVRREAARALANATPYYDDVRAEIG-AQGGVKLCVDLL 449
Query: 462 HNNNPNLSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMR 521
+ L ++A L NL+ NTH K+ E+ + + N ++ + L L N+
Sbjct: 450 LQADKELVKQAARALVNLARNTHNEEKLYESKGLEHSIRLINSPEKDLKMLGTKLLVNLS 509
Query: 522 LDESSIKTLKDRQFIHNVIQMLSSNSP 548
L+E + + + V+Q+L+S+ P
Sbjct: 510 LNEQARIAFCQKGGLSIVVQLLTSSDP 536
Score = 51 (23.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 627 HNVNVFLQLIANTERETKI---QFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSDQ 683
H V +Q+ N + + +FLH L +L S R L+ D ITQ+FS++++ Q
Sbjct: 884 HIVQEIMQVEVNYVKNLTLMVRKFLHPLAQL---STSKRPLLTP--DRITQIFSTIENIQ 938
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 125 (49.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 51/186 (27%), Positives = 78/186 (41%)
Query: 263 CPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXXRSSIEE 322
CP+ ELM+DPV + G ++ER IQ+ G K CP +Q +S I +
Sbjct: 234 CPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQ 293
Query: 323 WKQRE-IDLRFQNAIIKINSDDQSRRKSA------LEEMKNIMELPQYAEKAAKAGLIPK 375
W + I+L +N K NS D+ KS+ L + N + E+ A AG I
Sbjct: 294 WCEANGIELP-KN---KQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRL 349
Query: 376 LVEFLKDTRLS-TEA-ILKCLYFLAKYSDIHKE-----AIVEAGAVRRIVKQICKGETMP 428
L + + R+ EA + L L SD + A++ I +P
Sbjct: 350 LAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIP 409
Query: 429 EAIEVL 434
+ +EVL
Sbjct: 410 KIVEVL 415
Score = 54 (24.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 817 PSLIRVLSTGSSLAKQRAASALADLS 842
P ++ VL TGS ++ AA+ L LS
Sbjct: 409 PKIVEVLKTGSMETRENAAATLFSLS 434
Score = 54 (24.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 804 PELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASAL 838
PE + + + E P L+ V+ TGS ++ AA+ L
Sbjct: 519 PEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAIL 553
>ZFIN|ZDB-GENE-050522-17 [details] [associations]
symbol:trim35-1 "tripartite motif containing 35-1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-050522-17 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 eggNOG:NOG291077 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496
EMBL:BX469930 EMBL:BC095360 IPI:IPI00485397 RefSeq:NP_001018156.1
UniGene:Dr.108683 Ensembl:ENSDART00000073777 GeneID:553197
KEGG:dre:553197 CTD:553197 InParanoid:Q503E5 OMA:EACEINI
NextBio:20879991 Uniprot:Q503E5
Length = 507
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGG-KNCPTCRQEXXXXXXXXXXXXR 317
+ L C +C ++ DPV + CGHSF R+ I +H+ G +NCP CRQ R
Sbjct: 5 DDLSCAVCTDVFRDPVLLGCGHSFCRQCIYDHWSSSGTRNCPICRQ-VSRQRPVANVSLR 63
Query: 318 SSIEEWKQREIDLR 331
++ E + RE + R
Sbjct: 64 NTCESYLLREQNTR 77
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 104 (41.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 257 PIESLVCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKNCPTCRQEXXXXXXXXXXXX 316
P E L CP+ +LM DPV I G ++ER I++ F G CP +Q+
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV 331
Query: 317 RSSIEEW 323
+ I W
Sbjct: 332 KGLIASW 338
Score = 76 (31.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/158 (21%), Positives = 72/158 (45%)
Query: 331 RFQNAIIKINSDDQSRRK-SALEEMKNIMELPQYAEKAAKA-GLIPKLVEFL----KDTR 384
R+Q+ + +N ++ +K +E+++ +++ + A A G + L+ FL D
Sbjct: 424 RYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNN 483
Query: 385 LSTE-AILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETMPEAIEVLSELTKRETL 443
+ + + L+ LA ++ +KE ++ +G +R + K I E+ A + L+ +
Sbjct: 484 AAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEA 543
Query: 444 GEKIGNTKDCITIMVSLLHNN-NPNLSQKAHDVLQNLS 480
IG+++ + +V LL A L NLS
Sbjct: 544 KSVIGSSQ-AVPFLVQLLQKEIETQCKLDALHALYNLS 580
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 99 (39.9 bits), Expect = 0.00055, P = 0.00055
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 259 ESLVCPLCNELMEDPVAIVCGHSFERKAIQ-EH----FQRGGKNCPTCR 302
E + CP+C EL+ P+++ CGHSF + + H +G +CP CR
Sbjct: 11 EEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCR 59
>ZFIN|ZDB-GENE-060825-109 [details] [associations]
symbol:btr04 "bloodthirsty-related gene family,
member 4" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-109 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00486847
RefSeq:XP_003198956.1 UniGene:Dr.30113 Ensembl:ENSDART00000138523
GeneID:565512 KEGG:dre:565512 CTD:565512 NextBio:20885923
Bgee:F1Q9T2 Uniprot:F1Q9T2
Length = 440
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 40/188 (21%), Positives = 83/188 (44%)
Query: 231 LMQLLYSTELVRRPQDEAIPTYCQVY-----PI-ESLVCPLCNELMEDPVAIVCGHSFER 284
+ + L S+ ++R + ++I CQ P+ E L C +C ++ DPV+ CGH+F +
Sbjct: 1 MAESLPSSSKLKRTRRQSIDQMCQSLSSSQGPLFEELQCSVCLDVFTDPVSTPCGHNFCK 60
Query: 285 KAIQEHFQRGGK-NCPTCRQEXXXX-XXXXXXXXRSSIEEWKQREIDLRFQNAIIKINSD 342
+ E + + NCP C + R ++ +K+R Q I
Sbjct: 61 SCLNECWDKSQNCNCPICSETFSKRPKLKINTTLRQVVQLFKERLSKSEVQQMI------ 114
Query: 343 DQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKDTRLSTEAILKCLYFLAKYSD 402
Q R K ++++K+ EL + + + KA + + L+ + +L+ + K ++
Sbjct: 115 -QDRIKK-IQDIKHSAELRKKSTEREKASTVGLFSDLLRSIEICQAELLEMIKEKQKAAE 172
Query: 403 IHKEAIVE 410
E +++
Sbjct: 173 KQDEELIQ 180
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 99 (39.9 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 262 VCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKN-CPTCRQEXXXXXXXXXXXXRSSI 320
+CP+ E+M+DPV + G +++R +I++ G KN CP +Q+ R I
Sbjct: 17 LCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTLRRLI 76
Query: 321 EEW 323
+ W
Sbjct: 77 QSW 79
Score = 68 (29.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 27/108 (25%), Positives = 50/108 (46%)
Query: 336 IIKINSD--DQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKDT-----RLSTE 388
+++I D Q K+A+ + NI + KA +AG+I ++E L D R E
Sbjct: 236 VVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPE 295
Query: 389 AILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICK-GETMPE-AIEVL 434
+ L L + ++ E + A+ + K+I + +T + A+ VL
Sbjct: 296 MAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVL 343
>ZFIN|ZDB-GENE-060825-228 [details] [associations]
symbol:btr02 "bloodthirsty-related gene family,
member 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-228 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 EMBL:BC122154
IPI:IPI00619636 UniGene:Dr.72357 ProteinModelPortal:Q0P4C7
eggNOG:NOG283002 OrthoDB:EOG4H4640 NextBio:20884412
ArrayExpress:Q0P4C7 Uniprot:Q0P4C7
Length = 438
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 46/207 (22%), Positives = 87/207 (42%)
Query: 262 VCPLCNELMEDPVAIVCGHSFERKAIQEHFQRGGKN-CPTCRQEXXXXXXXXXXXXRSSI 320
+C LC E+ +PV CGHSF + ++ ++ R G + CP CR+ + +
Sbjct: 14 LCSLCEEIFSNPVTTPCGHSFCKACLRVYWSRSGSDECPLCRKAFGSRPRLSVNRILADV 73
Query: 321 EEWKQREIDLRFQNAIIKINS-DDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEF 379
E R+ L ++ ++ D+ + + +E+M I E Q EK + + K
Sbjct: 74 TE-NYRKTCLAAKSRFFSMDELQDEPKNEGEVEQM--IQERVQKIEKLQNSLKLVKST-C 129
Query: 380 LKDTRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKGETMPEAIEVLSELTK 439
L++ + S L L K HK A+ +R ++ + E + +++E E+ +
Sbjct: 130 LREVQESQRVFSNLLSTLEKS---HKLAVTAVEQKQREAEK--RVERLVKSLE--KEILE 182
Query: 440 RETLGEKIGNTKDCITIMVSLLHNNNP 466
E + + D + S H P
Sbjct: 183 LENGQSNLEHLNDMERLKKSFSHIPRP 209
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1028 910 0.00089 122 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 620 (66 KB)
Total size of DFA: 392 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 74.13u 0.11s 74.24t Elapsed: 00:00:03
Total cpu time: 74.13u 0.11s 74.24t Elapsed: 00:00:03
Start: Tue May 21 17:57:39 2013 End: Tue May 21 17:57:42 2013