Query 001690
Match_columns 1028
No_of_seqs 548 out of 4161
Neff 8.8
Searched_HMMs 29240
Date Tue Mar 26 17:09:31 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001690.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_985-989//hhsearch_pdb/001690hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3now_A UNC-45 protein, SD10334 1.0 1 1 376.9 44.6 488 425-988 262-788 (810)
2 2z6g_A B-catenin; FULL-length, 1.0 1 1 372.5 44.6 559 332-976 117-695 (780)
3 2z6g_A B-catenin; FULL-length, 1.0 1 1 367.6 42.7 557 371-1004 115-684 (780)
4 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 364.1 43.3 531 367-976 10-559 (644)
5 1jdh_A Beta-catenin; beta-cate 1.0 1 1 359.9 42.4 503 367-980 13-528 (529)
6 3now_A UNC-45 protein, SD10334 1.0 1 1 356.5 37.6 482 336-940 253-785 (810)
7 3ul1_B Importin subunit alpha- 1.0 1 1 346.8 33.9 417 451-987 56-483 (510)
8 2z6h_A Catenin beta-1, beta-ca 1.0 1 1 344.6 42.6 526 409-1004 11-548 (644)
9 1jdh_A Beta-catenin; beta-cate 1.0 1 1 341.3 40.3 482 451-1019 16-529 (529)
10 3tpo_A Importin subunit alpha- 1.0 1 1 340.5 34.2 417 451-987 75-502 (529)
No 1
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=376.94 Aligned_cols=488 Identities=10% Similarity=0.068 Sum_probs=344.7
Q ss_pred CCHHHHHHHHHHHHH-CHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHC
Q ss_conf 764689999998621-0134465404343299999976218934699999998411159434999998098366787422
Q 001690 425 ETMPEAIEVLSELTK-RETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFN 503 (1028)
Q Consensus 425 e~~~~A~~~L~~Ls~-~~~~~~~i~~~~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~~n~~~i~~~G~i~~Li~lL~ 503 (1028)
+....|++++..+.. ..+....+....|+++.|+.++.++++..+..|++++.+.+.++.++..+.+.|+ |+|+.+++
T Consensus 262 ~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~~~~R~~I~~~gv-~~L~~Ll~ 340 (810)
T 3now_A 262 ESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASSKKDKAKALCEQGV-DILKRLYH 340 (810)
T ss_dssp HHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSHHHHHTTHHHHH-HHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC-HHHHHHHC
T ss_conf 76899999999996598988899983202699999986799788999999999998189099999998696-79999874
Q ss_pred CCCHHHHHHHHHHHHHHHCC--CCHHHHHHHCCC----HHHHHHHHCCC--CHHHHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf 79999999999999980149--101899850795----79999984179--98889999999999710887599987289
Q 001690 504 RGSQETRALMASALRNMRLD--ESSIKTLKDRQF----IHNVIQMLSSN--SPVCKSACLKCIKTLIAHSKMVKHLLLDP 575 (1028)
Q Consensus 504 ~~~~~~~~~a~~~L~~L~~~--~~~~~~i~~~g~----i~~Lv~lL~~~--~~~~~~~A~~aL~~Ls~~~~~~~~lv~~~ 575 (1028)
++++.++..++.+|++++.. .+.+..+.+.|+ ++.|+++|.++ +..++++|+++|.+|+..++.+..++.+.
T Consensus 341 s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~ 420 (810)
T 3now_A 341 SKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDK 420 (810)
T ss_dssp CSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCC
T ss_conf 89788999999999974414466865353200449999999999865789987899999999999837927899999820
Q ss_pred CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC-------------------------CCCCCHHHCCCCCHH
Q ss_conf 9679899998311898147999999999998289997531-------------------------010001122325299
Q 001690 576 ATIPLLLGLIQFVRSDPHLKHEAAEILALMVGGCQHPQFE-------------------------LHHGLQELQSEHNVN 630 (1028)
Q Consensus 576 g~i~~L~~lL~~~~~~~~l~~~a~~~L~~l~~~~~~~~~~-------------------------~~~~~~~l~~~~~i~ 630 (1028)
|++|.|++++.+++ ..++..++++|.|++.+...++.. ...+.+.+.+.|+++
T Consensus 421 g~Ip~LV~LL~s~d--~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp 498 (810)
T 3now_A 421 ASIHALMDLARGGN--QSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITT 498 (810)
T ss_dssp HHHHHHHHHHHTTC--GGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CHHHHHHHHHCCCC--HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
T ss_conf 64999999967998--1899999999999857960212128999999876424765564331777799999999885999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99987217998999999999999511988999999821052999996323899558999999999815999999888999
Q 001690 631 VFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSDQPVVRRWAMRLIHCISEGNPNGVPLPPS 710 (1028)
Q Consensus 631 ~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~~~ 710 (1028)
.|+.++.++++.+++.++++|.+++.+ ...+..+.+ .|++++|+.++.+++...+..|+++|.+|+..... ......
T Consensus 499 ~LV~LL~s~s~~vqe~Aa~aL~NLA~d-~~~r~~Vv~-~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p-~~~~~~ 575 (810)
T 3now_A 499 ALCALAKTESHNSQELIARVLNAVCGL-KELRGKVVQ-EGGVKALLRMALEGTEKGKRHATQALARIGITINP-EVSFSG 575 (810)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHTS-HHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCH-HHHTTT
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCC-HHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH-HHHHCC
T ss_conf 999998599989999999999998589-889999998-78999999997059888999999999999658985-665310
Q ss_pred CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99966378798740489989899999999840999995778999710436999999971137888877887630057999
Q 001690 711 PGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKAIHEVICSMDGRHNGIRTPACQDASLLEI 790 (1028)
Q Consensus 711 ~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~~~~~~~~~e~ 790 (1028)
....+++++|+.+|.++.....+..|+.+|+||+.+++..+..+.+.|+++.|+.++.+. ...++++
T Consensus 576 ~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~-------------~~~Vq~~ 642 (810)
T 3now_A 576 QRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMED-------------HLYLTRA 642 (810)
T ss_dssp HHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSC-------------CTTHHHH
T ss_pred HHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCC-------------CHHHHHH
T ss_conf 023157999999867898278899999999998469989999999868889999998289-------------9999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9999977159999588999860-588789999851298899999999987320004444222112222112348513576
Q 001690 791 ALAALLHFTDPTKPELQRQVGK-LEVYPSLIRVLSTGSSLAKQRAASALADLSQSTSVSVSNATLTAKQTKTLMPMFDMT 869 (1028)
Q Consensus 791 ~~~aL~~l~~~~~~~~~~~i~~-~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~ls~~~~~~~~~~~l~~~~~~~~~~~~~~~ 869 (1028)
++.++.+++. +++.+..+.+ .|.++.|+.++.+++..+|+.|+|+|+|++..+.. ..
T Consensus 643 A~~~L~NLa~--~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~------~~-------------- 700 (810)
T 3now_A 643 AAQCLCNLVM--SEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVK------CC-------------- 700 (810)
T ss_dssp HHHHHHHHTT--SHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHH------HH--------------
T ss_pred HHHHHHHHHC--CHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH------HH--------------
T ss_conf 9999999967--9599999986168089999984699989999999999998679989------99--------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 6321025555888989887755566578443136641-476046886104788207999999999862042004567899
Q 001690 870 KLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVK-ADAVKPLVRNLNDMESGVAEAALTALETLLADHSTLSHAIAV 948 (1028)
Q Consensus 870 ~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~-~gai~~Lv~lL~~~d~~v~~~A~~AL~~L~~d~~~~~~~~~~ 948 (1028)
..+++ .|++++|+++|.+.|.+++..|+++|.|++..+. +....
T Consensus 701 --------------------------------~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~---e~~~~ 745 (810)
T 3now_A 701 --------------------------------EKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGE---EIAKK 745 (810)
T ss_dssp --------------------------------HHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCH---HHHHH
T ss_pred --------------------------------HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH---HHHHH
T ss_conf --------------------------------9999874889899998779988999999999999986999---99999
Q ss_pred HHHCCCHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8721454999999722---994588899999999984455666
Q 001690 949 IVDSQGVLAILQVLEK---GSLSAKTKALDLFQMIQKHTRITD 988 (1028)
Q Consensus 949 i~~~~~i~~l~~ll~~---~~~~~~~~A~~~l~~i~~~~~~~~ 988 (1028)
+.++|++++|.+++.. ++..+.+.|..+|+.+.+++....
T Consensus 746 l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g~~~~ 788 (810)
T 3now_A 746 LFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRIIER 788 (810)
T ss_dssp HHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9989788999999827665767999999999999986798667
No 2
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=372.51 Aligned_cols=559 Identities=14% Similarity=0.114 Sum_probs=446.9
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 887786514898687999999999850770466787742559899999714-9898999999999981056787999998
Q 001690 332 FQNAIIKINSDDQSRRKSALEEMKNIMELPQYAEKAAKAGLIPKLVEFLKD-TRLSTEAILKCLYFLAKYSDIHKEAIVE 410 (1028)
Q Consensus 332 i~~~~~~L~s~~~~~~~~al~~L~~l~~~~~~r~~i~~~g~ip~Lv~lL~s-~~~~r~~A~~~L~~Ls~~~~~~k~~i~~ 410 (1028)
++.++..|.+++.+.+..++..++.. ++..+. .|++|.|+++|.+ +..+|+.|+.+|.+++.+. .++..+..
T Consensus 117 i~~lv~~L~~~~~~~r~~a~~~l~~~-----~~~~i~-~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~-~~~~~i~~ 189 (780)
T 2z6g_A 117 HPTNVQRLAEPSQMLKHAVVNLINYQ-----DDAELA-TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMR 189 (780)
T ss_dssp ---------CCSCHHHHHHHHHHHHH-----HHHHHH-HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSH-HHHHHHTT
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHH-----HHHHHH-HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHH
T ss_conf 89999982386599999999999861-----377777-387999999877999999999999999996798-41899875
Q ss_pred -HCHHHHHHHHHCCC---CCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC-HH
Q ss_conf -20068999863058---76468999999862101344654043432999999762189346999999984111594-34
Q 001690 411 -AGAVRRIVKQICKG---ETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNT-HF 485 (1028)
Q Consensus 411 -~g~i~~lv~~L~~~---e~~~~A~~~L~~Ls~~~~~~~~i~~~~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~-~n 485 (1028)
.++++.++..|.++ +.+..|+.+|.+++..++++..+.. .|+|+.|+.+|+++++.++..|+++|.||+.+. .+
T Consensus 190 ~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~-~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~ 268 (780)
T 2z6g_A 190 SPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFK-SGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGA 268 (780)
T ss_dssp CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTH
T ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 5083999999975799999999999999999679636899987-588999999975998899999999999996798354
Q ss_pred HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC-CCCHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHC
Q ss_conf 9999980983667874227999999999999998014-9101899850795799999841799-8889999999999710
Q 001690 486 AVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRL-DESSIKTLKDRQFIHNVIQMLSSNS-PVCKSACLKCIKTLIA 563 (1028)
Q Consensus 486 ~~~i~~~G~i~~Li~lL~~~~~~~~~~a~~~L~~L~~-~~~~~~~i~~~g~i~~Lv~lL~~~~-~~~~~~A~~aL~~Ls~ 563 (1028)
+..+++.|+++.|+.+|.+++..++..++.+|.+++. +++++..+.+.|+++.|++++++++ ...++.++.+|++|+.
T Consensus 269 ~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~ 348 (780)
T 2z6g_A 269 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV 348 (780)
T ss_dssp HHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999769888999998028788999999999998447928899999759889999998468889999999999998431
Q ss_pred CCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHH
Q ss_conf 88759998728996798999983118981479999999999982899975310100011223252999998721799899
Q 001690 564 HSKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEAAEILALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERET 643 (1028)
Q Consensus 564 ~~~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~ 643 (1028)
++.++..++.. |+++.|+.++.+.+ ..+++.++++|.+++...... ....++++.|+.++.+.++.+
T Consensus 349 ~~~~~~~i~~~-g~l~~Ll~lL~~~~--~~~~~~a~~~L~~L~~~~~~~----------~~~~~~i~~Lv~lL~~~d~~v 415 (780)
T 2z6g_A 349 CSSNKPAIVEA-GGMQALGLHLTDPS--QRLVQNCLWTLRNLSDAATKQ----------EGMEGLLGTLVQLLGSDDINV 415 (780)
T ss_dssp STTHHHHHHHT-THHHHHGGGTTCSC--HHHHHHHHHHHHHHHTTCTTC----------SCCHHHHHHHHHHTTCSCHHH
T ss_pred CHHHHHHHHHH-CHHHHHHHHHCCCC--HHHHHHHHHHHHHHHCCCHHH----------HHHHHHHHHHHHHHCCCCHHH
T ss_conf 73789999980-65999999871776--499999999999985234434----------456449999999974999899
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCC-C-HHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCHHHH
Q ss_conf 999999999951198899999982105299999632389-9-55899999999981599999988-89999996637879
Q 001690 644 KIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSD-Q-PVVRRWAMRLIHCISEGNPNGVP-LPPSPGKETAINTV 720 (1028)
Q Consensus 644 ~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~-~-~~v~~~A~~~L~~Ls~~~~~~~~-~~~~~~~~~~i~~L 720 (1028)
+..++++|.+|+..+...+..+.+ .|+++.|+.++.+. + ..++..|+++|++|+........ ...+ ...++++.|
T Consensus 416 r~~A~~aL~~L~~~~~~~~~~i~~-~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v-~~~~~l~~L 493 (780)
T 2z6g_A 416 VTCAAGILSNLTCNNYKNKMMVCQ-VGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAV-RLHYGLPVV 493 (780)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHT-TTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHH-HHTTCHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHH-CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHCCCHHHH
T ss_conf 999999999998588888999998-789999999997139878999999999999874585279999999-975888999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC--CC-----CC--CCCCCCHHHHHHHH
Q ss_conf 87404899898999999998409999957789997104369999999711378--88-----87--78876300579999
Q 001690 721 AAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKAIHEVICSMDGR--HN-----GI--RTPACQDASLLEIA 791 (1028)
Q Consensus 721 v~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~~g~i~~Li~lL~~~~~~--~~-----~~--~~~~~~~~~~~e~~ 791 (1028)
+++|.+++...++..|+++|+|++.+ ...+..+.+.|+++.|+.+|.+.... +. +. .........+++.+
T Consensus 494 ~~lL~~~~~~~v~~~A~~aL~nLa~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a 572 (780)
T 2z6g_A 494 VKLLHPPSHWPLIKATVGLIRNLALC-PANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEAC 572 (780)
T ss_dssp HHTTSTTCCHHHHHHHHHHHHHHHSS-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHH
T ss_conf 99856887678999999999998539-88799999788899999998720156777875224541123046769999999
Q ss_pred HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99997715999958899986058878999985129889999999998732000444422211222211234851357663
Q 001690 792 LAALLHFTDPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALADLSQSTSVSVSNATLTAKQTKTLMPMFDMTKL 871 (1028)
Q Consensus 792 ~~aL~~l~~~~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~ls~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 871 (1028)
+++|.+++ .++..+..+.+.|+++.|+++|.++++.++..|+.+|++++..... +
T Consensus 573 ~~aL~~La--~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~-------~---------------- 627 (780)
T 2z6g_A 573 TGALHILA--RDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEA-------A---------------- 627 (780)
T ss_dssp HHHHHHHT--TSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHH-------H----------------
T ss_pred HHHHHHHH--CCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH-------H----------------
T ss_conf 99999983--5846699998778689999997699889999999999999559888-------8----------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 21025555888989887755566578443136641476046886104788207999999999862042004567899872
Q 001690 872 LLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLNDMESGVAEAALTALETLLADHSTLSHAIAVIVD 951 (1028)
Q Consensus 872 l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~~~d~~v~~~A~~AL~~L~~d~~~~~~~~~~i~~ 951 (1028)
..+.+.|++++|++++++.|.+|++.|++||.++..+.... ....
T Consensus 628 ------------------------------~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~~~--~~~~--- 672 (780)
T 2z6g_A 628 ------------------------------EAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQD--YKKR--- 672 (780)
T ss_dssp ------------------------------HHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSCTT--HHHH---
T ss_pred ------------------------------HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH--HHCC---
T ss_conf ------------------------------99997787999999875899899999999999997188175--5404---
Q ss_pred CCCHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 1454999999722994588899999
Q 001690 952 SQGVLAILQVLEKGSLSAKTKALDL 976 (1028)
Q Consensus 952 ~~~i~~l~~ll~~~~~~~~~~A~~~ 976 (1028)
.+++.+.++|.+. ...|..+...
T Consensus 673 -l~~~ll~~l~~~~-~~~w~~~~~~ 695 (780)
T 2z6g_A 673 -LSVELTSSLFRTE-PMTWNETGDL 695 (780)
T ss_dssp -HHHHHHHHC---------------
T ss_pred -CCHHHHHHHHHCC-CCCCCCCCCC
T ss_conf -5278999998078-8664657654
No 3
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=1.00 E-value=1 Score=367.55 Aligned_cols=557 Identities=12% Similarity=0.140 Sum_probs=447.5
Q ss_pred CCHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCC--CCHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 559899999714-989899999999998105678799999820068999863058--76468999999862101344654
Q 001690 371 GLIPKLVEFLKD-TRLSTEAILKCLYFLAKYSDIHKEAIVEAGAVRRIVKQICKG--ETMPEAIEVLSELTKRETLGEKI 447 (1028)
Q Consensus 371 g~ip~Lv~lL~s-~~~~r~~A~~~L~~Ls~~~~~~k~~i~~~g~i~~lv~~L~~~--e~~~~A~~~L~~Ls~~~~~~~~i 447 (1028)
..+|.+++.|.+ +...+..++..+... ++..+. .|+++.++.+|.+. ..++.|+.+|.+++....++..+
T Consensus 115 ~~i~~lv~~L~~~~~~~r~~a~~~l~~~------~~~~i~-~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~~i 187 (780)
T 2z6g_A 115 SAHPTNVQRLAEPSQMLKHAVVNLINYQ------DDAELA-TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAI 187 (780)
T ss_dssp -----------CCSCHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHH------HHHHHH-HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 3089999982386599999999999861------377777-387999999877999999999999999996798418998
Q ss_pred HCCCCHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CC
Q ss_conf 04343299999976218-93469999999841115943499999809836678742279999999999999980149-10
Q 001690 448 GNTKDCITIMVSLLHNN-NPNLSQKAHDVLQNLSHNTHFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRLD-ES 525 (1028)
Q Consensus 448 ~~~~g~I~~Lv~lL~~~-~~~~~~~A~~~L~nLs~~~~n~~~i~~~G~i~~Li~lL~~~~~~~~~~a~~~L~~L~~~-~~ 525 (1028)
....++++.|+.+|+++ ++.++..|+.+|.+|+...+++..+++.|+++.|+.+|.++++.++..++++|.+|+.. ++
T Consensus 188 ~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~ 267 (780)
T 2z6g_A 188 MRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEG 267 (780)
T ss_dssp TTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTT
T ss_pred HHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH
T ss_conf 75508399999997579999999999999999967963689998758899999997599889999999999999679835
Q ss_pred HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 189985079579999984179988899999999997108-8759998728996798999983118981479999999999
Q 001690 526 SIKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAH-SKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEAAEILAL 604 (1028)
Q Consensus 526 ~~~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~Ls~~-~~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a~~~L~~ 604 (1028)
.+..+.+.|+++.|+++|.+++..++..++.+|.+++.. ++++..++.. |+++.|+.++..++. ...++.+..+|++
T Consensus 268 ~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~-~~i~~Lv~lL~~~~~-~~~~~~a~~aL~~ 345 (780)
T 2z6g_A 268 AKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILAS-GGPQALVNIMRTYTY-EKLLWTTSRVLKV 345 (780)
T ss_dssp HHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTT-THHHHHHHHHTTCCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC-CCHHHHHHHHHCCCH-HHHHHHHHHHHHH
T ss_conf 49999976988899999802878899999999999844792889999975-988999999846888-9999999999998
Q ss_pred HHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCH
Q ss_conf 98289997531010001122325299999872179989999999999995119889999998210529999963238995
Q 001690 605 MVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSDQP 684 (1028)
Q Consensus 605 l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~~~ 684 (1028)
++.... ....+...|+++.|+.++.+.++.++.+++++|.+|+..... .... .++++.|+.++.+.+.
T Consensus 346 Ls~~~~--------~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~---~~~~-~~~i~~Lv~lL~~~d~ 413 (780)
T 2z6g_A 346 LSVCSS--------NKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATK---QEGM-EGLLGTLVQLLGSDDI 413 (780)
T ss_dssp HHTSTT--------HHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTT---CSCC-HHHHHHHHHHTTCSCH
T ss_pred HHCCHH--------HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH---HHHH-HHHHHHHHHHHCCCCH
T ss_conf 431737--------899999806599999987177649999999999998523443---4456-4499999999749998
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC-CHHHHHHHHHHHHCCCCCCHH---HHHHHHHCCCH
Q ss_conf 58999999999815999999888999999663787987404899-898999999998409999957---78999710436
Q 001690 685 VVRRWAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAIFTCSP-DVEERSLAAGIISQLPKDDIY---VDEVLCKSEAL 760 (1028)
Q Consensus 685 ~v~~~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~lL~~~~-~~~~~~~a~~~L~nL~~~~~~---~~~~l~~~g~i 760 (1028)
.++..|+++|++|+. ......... ...++++.|+++|.+++ ...++..|+++|+||+..+.+ .+..+...|++
T Consensus 414 ~vr~~A~~aL~~L~~-~~~~~~~~i--~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l 490 (780)
T 2z6g_A 414 NVVTCAAGILSNLTC-NNYKNKMMV--CQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGL 490 (780)
T ss_dssp HHHHHHHHHHHHHTS-SCHHHHHHH--HTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHH-CCHHHHHHH--HHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
T ss_conf 999999999999985-888889999--98789999999997139878999999999999874585279999999975888
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99999997113788887788763005799999999771599995889998605887899998512988999999999873
Q 001690 761 KAIHEVICSMDGRHNGIRTPACQDASLLEIALAALLHFTDPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALAD 840 (1028)
Q Consensus 761 ~~Li~lL~~~~~~~~~~~~~~~~~~~~~e~~~~aL~~l~~~~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~ 840 (1028)
+.|+.+|.+. . ...+.+.++++|.+++. .+..+..+.+.|+++.|+++|.++++++|+.|+|++.|
T Consensus 491 ~~L~~lL~~~------~------~~~v~~~A~~aL~nLa~--~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~n 556 (780)
T 2z6g_A 491 PVVVKLLHPP------S------HWPLIKATVGLIRNLAL--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQ 556 (780)
T ss_dssp HHHHHTTSTT------C------CHHHHHHHHHHHHHHHS--SHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHCCC------C------HHHHHHHHHHHHHHHHC--CHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCC
T ss_conf 9999985688------7------67899999999999853--98879999978889999999872015677787522454
Q ss_pred --HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHC
Q ss_conf --200044442221122221123485135766321025555888989887755566578443136641476046886104
Q 001690 841 --LSQSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLN 918 (1028)
Q Consensus 841 --ls~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~ 918 (1028)
+...... .++.. .. ...+ +....+..+.+.+.+.|+|++|+++|.
T Consensus 557 q~~~~~~~~----~~v~~----------~a----~~aL---------------~~La~~~~~~~~l~~~~~i~~Lv~lL~ 603 (780)
T 2z6g_A 557 QQFVEGVRM----EEIVE----------AC----TGAL---------------HILARDIHNRIVIRGLNTIPLFVQLLY 603 (780)
T ss_dssp -CCSTTCCH----HHHHH----------HH----HHHH---------------HHHTTSHHHHHHHHHTCCHHHHHHGGG
T ss_pred CHHHCCCCH----HHHHH----------HH----HHHH---------------HHHHCCHHHHHHHHHCCCHHHHHHHHC
T ss_conf 112304676----99999----------99----9999---------------998358466999987786899999976
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHH
Q ss_conf 788207999999999862042004567899872145499999972299458889999999998445566654101-0038
Q 001690 919 DMESGVAEAALTALETLLADHSTLSHAIAVIVDSQGVLAILQVLEKGSLSAKTKALDLFQMIQKHTRITDTLLQR-SERI 997 (1028)
Q Consensus 919 ~~d~~v~~~A~~AL~~L~~d~~~~~~~~~~i~~~~~i~~l~~ll~~~~~~~~~~A~~~l~~i~~~~~~~~~~~~~-~~~~ 997 (1028)
+.+..++.+|+.+|++|..+. ++...|.+.||+++|++++.++++.+++.|.++|.++....... |... +...
T Consensus 604 ~~~~~v~~~a~~aL~~L~~~~----~~~~~i~~~g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~~~--~~~~l~~~l 677 (780)
T 2z6g_A 604 SPIENIQRVAAGVLCELAQDK----EAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQD--YKKRLSVEL 677 (780)
T ss_dssp CSCHHHHHHHHHHHHHHHTSH----HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSCTT--HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCH----HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHH--HHCCCCHHH
T ss_conf 998899999999999995598----88899997787999999875899899999999999997188175--540452789
Q ss_pred HHHHCCC
Q ss_conf 8762046
Q 001690 998 LIQLLDD 1004 (1028)
Q Consensus 998 Lv~~~~~ 1004 (1028)
|..+|.+
T Consensus 678 l~~l~~~ 684 (780)
T 2z6g_A 678 TSSLFRT 684 (780)
T ss_dssp HHHC---
T ss_pred HHHHHHC
T ss_conf 9999807
No 4
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=364.15 Aligned_cols=531 Identities=15% Similarity=0.123 Sum_probs=433.6
Q ss_pred HHHHCCHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHH-HCHHHHHHHHHCCC---CCHHHHHHHHHHHHHCH
Q ss_conf 7742559899999714-9898999999999981056787999998-20068999863058---76468999999862101
Q 001690 367 AAKAGLIPKLVEFLKD-TRLSTEAILKCLYFLAKYSDIHKEAIVE-AGAVRRIVKQICKG---ETMPEAIEVLSELTKRE 441 (1028)
Q Consensus 367 i~~~g~ip~Lv~lL~s-~~~~r~~A~~~L~~Ls~~~~~~k~~i~~-~g~i~~lv~~L~~~---e~~~~A~~~L~~Ls~~~ 441 (1028)
....|++|.|+++|++ +..+|..|+.+|.+++.+. .++..+.. .|.++.++..|.++ +.+..|+.+|.+++..+
T Consensus 10 ~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~ 88 (644)
T 2z6h_A 10 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR 88 (644)
T ss_dssp --CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH
T ss_pred HHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH
T ss_conf 565530999999873999999999999999997787-5399998650769999999864899999999999999984691
Q ss_pred HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC-HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 344654043432999999762189346999999984111594-3499999809836678742279999999999999980
Q 001690 442 TLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNT-HFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNM 520 (1028)
Q Consensus 442 ~~~~~i~~~~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~-~n~~~i~~~G~i~~Li~lL~~~~~~~~~~a~~~L~~L 520 (1028)
+++..+.. .|+++.|+.+++++++.++..|+++|.|++... .++..+++.|++|.|+.+|.+++..++..++.+|.++
T Consensus 89 ~~~~~i~~-~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~L 167 (644)
T 2z6h_A 89 EGLLAIFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQIL 167 (644)
T ss_dssp HHHHHHHT-TTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 65899998-59899999998089899999999999999737610389999779948999987759789999999999999
Q ss_pred HC-CCCHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 14-9101899850795799999841799-888999999999971088759998728996798999983118981479999
Q 001690 521 RL-DESSIKTLKDRQFIHNVIQMLSSNS-PVCKSACLKCIKTLIAHSKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEA 598 (1028)
Q Consensus 521 ~~-~~~~~~~i~~~g~i~~Lv~lL~~~~-~~~~~~A~~aL~~Ls~~~~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a 598 (1028)
+. +++++..+.+.|+++.|++++++++ ...++.++.+|+||+.++.++..++.. |+++.|+.++..++ ..+++.+
T Consensus 168 a~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~-g~l~~L~~ll~~~~--~~~~~~a 244 (644)
T 2z6h_A 168 AYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA-GGMQALGLHLTDPS--QRLVQNC 244 (644)
T ss_dssp HTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHT-THHHHHHTTTTCSC--HHHHHHH
T ss_pred HHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHC-CCHHHHHHHHHCCC--HHHHHHH
T ss_conf 82695899999986984999999972882889999999999980695018999987-87999999982698--8999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH
Q ss_conf 99999998289997531010001122325299999872179989999999999995119889999998210529999963
Q 001690 599 AEILALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSS 678 (1028)
Q Consensus 599 ~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~L 678 (1028)
+++|.|++....... ...++++.|+.++.+.++.++..++++|.+|+.+++..+..+.+ .|+++.|+.+
T Consensus 245 ~~~L~nL~~~~~~~~----------~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~-~g~v~~Lv~l 313 (644)
T 2z6h_A 245 LWTLRNLSDAATKQE----------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQ-VGGIEALVRT 313 (644)
T ss_dssp HHHHHHHGGGCTTCC----------SCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHH-TTHHHHHHHH
T ss_pred HHHHHHHHHCCHHHH----------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHH
T ss_conf 999999862551434----------36359999999973898899999999999987199899999997-5887999999
Q ss_pred HCCC-C-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 2389-9-5589999999998159999998889999996637879874048998989999999984099999577899971
Q 001690 679 LDSD-Q-PVVRRWAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCK 756 (1028)
Q Consensus 679 l~~~-~-~~v~~~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~ 756 (1028)
+.+. + +.++..|+++|++|+...+..+..+......++++.|+++|.+++...++..++++|+|++.++.. +..+.+
T Consensus 314 L~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~-~~~i~~ 392 (644)
T 2z6h_A 314 VLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPAN-HAPLRE 392 (644)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGG-HHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH-HHHHHH
T ss_conf 9804985799999999999985589447999999997469189999857667457999999999997369877-799997
Q ss_pred CCCHHHHHHHHHHHCCC--CCCC-------CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf 04369999999711378--8887-------78876300579999999977159999588999860588789999851298
Q 001690 757 SEALKAIHEVICSMDGR--HNGI-------RTPACQDASLLEIALAALLHFTDPTKPELQRQVGKLEVYPSLIRVLSTGS 827 (1028)
Q Consensus 757 ~g~i~~Li~lL~~~~~~--~~~~-------~~~~~~~~~~~e~~~~aL~~l~~~~~~~~~~~i~~~~~i~~Lv~lL~~~~ 827 (1028)
.|+++.|+.++.+.+.. .... .........+.+.++++|.+++ .+...+..+.+.|+++.|+++|.+++
T Consensus 393 ~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La--~~~~~~~~l~~~~~i~~Lv~lL~~~~ 470 (644)
T 2z6h_A 393 QGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILA--RDVHNRIVIRGLNTIPLFVQLLYSPI 470 (644)
T ss_dssp TTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHT--TSHHHHHHHHHTTCHHHHHHHTTCSC
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 6879999999850032466675204553011135659999999999999996--19999999874786799999971897
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
Q ss_conf 89999999998732000444422211222211234851357663210255558889898877555665784431366414
Q 001690 828 SLAKQRAASALADLSQSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKA 907 (1028)
Q Consensus 828 ~~vk~~Aa~aL~~ls~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~ 907 (1028)
+.+++.|+++|++++..... + ..+.+.
T Consensus 471 ~~v~~~a~~aL~~l~~~~~~-------~----------------------------------------------~~i~~~ 497 (644)
T 2z6h_A 471 ENIQRVAAGVLCELAQDKEA-------A----------------------------------------------EAIEAE 497 (644)
T ss_dssp HHHHHHHHHHHHHHHTSHHH-------H----------------------------------------------HHHHHT
T ss_pred HHHHHHHHHHHHHHHCCHHH-------H----------------------------------------------HHHHHC
T ss_conf 78999999999999729877-------8----------------------------------------------999975
Q ss_pred CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 760468861047882079999999998620420045678998721454999999722994588899999
Q 001690 908 DAVKPLVRNLNDMESGVAEAALTALETLLADHSTLSHAIAVIVDSQGVLAILQVLEKGSLSAKTKALDL 976 (1028)
Q Consensus 908 gai~~Lv~lL~~~d~~v~~~A~~AL~~L~~d~~~~~~~~~~i~~~~~i~~l~~ll~~~~~~~~~~A~~~ 976 (1028)
|++++|++++.++|.+++..|++||.++..+... .+...+ ++..+.++|.+. ...|..+...
T Consensus 498 g~l~~L~~ll~~~~~~vr~~A~~aL~~l~~~~~~--~~~~~~----~~~il~~~~~~~-~~~w~~~~~~ 559 (644)
T 2z6h_A 498 GATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQ--DYKKRL----SVELTSSLFRTE-PMAWNETADL 559 (644)
T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTTSCH--HHHHHH----HHHHHHHHSCCS-CGGGC-----
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH--HHHCCC----CHHHHHHHHHCC-CCCCCCCCCC
T ss_conf 9866899987699889999999999998646838--653044----569999998179-8653556533
No 5
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=359.88 Aligned_cols=503 Identities=14% Similarity=0.112 Sum_probs=402.8
Q ss_pred HHHHCCHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHH-HCHHHHHHHHHCCC---CCHHHHHHHHHHHHHCH
Q ss_conf 7742559899999714-9898999999999981056787999998-20068999863058---76468999999862101
Q 001690 367 AAKAGLIPKLVEFLKD-TRLSTEAILKCLYFLAKYSDIHKEAIVE-AGAVRRIVKQICKG---ETMPEAIEVLSELTKRE 441 (1028)
Q Consensus 367 i~~~g~ip~Lv~lL~s-~~~~r~~A~~~L~~Ls~~~~~~k~~i~~-~g~i~~lv~~L~~~---e~~~~A~~~L~~Ls~~~ 441 (1028)
....|++|.|+++|++ +..+|..|+.+|.+++.+. +++..+.. .|+++.++..|.++ +.+..++.+|.+++..+
T Consensus 13 ~~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~ 91 (529)
T 1jdh_A 13 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR 91 (529)
T ss_dssp ----CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 156734999999867899899999999999987478-1178998673469999999854899999999999999987492
Q ss_pred HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC-HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 344654043432999999762189346999999984111594-3499999809836678742279999999999999980
Q 001690 442 TLGEKIGNTKDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNT-HFAVKMAEAGYFQPFVACFNRGSQETRALMASALRNM 520 (1028)
Q Consensus 442 ~~~~~i~~~~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~-~n~~~i~~~G~i~~Li~lL~~~~~~~~~~a~~~L~~L 520 (1028)
+++..+.. .|++|.|+.+++++++.++..|+++|.|++.+. .++..+++.|++|.|+.+|.+++..++..++.+|.++
T Consensus 92 ~~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~l 170 (529)
T 1jdh_A 92 EGLLAIFK-SGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQIL 170 (529)
T ss_dssp HHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 42799998-49999999988399889999999999997058842089998839979999998069888999999999999
Q ss_pred HC-CCCHHHHHHHCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 14-9101899850795799999841799-888999999999971088759998728996798999983118981479999
Q 001690 521 RL-DESSIKTLKDRQFIHNVIQMLSSNS-PVCKSACLKCIKTLIAHSKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEA 598 (1028)
Q Consensus 521 ~~-~~~~~~~i~~~g~i~~Lv~lL~~~~-~~~~~~A~~aL~~Ls~~~~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a 598 (1028)
+. +++++..+.+.|+++.|++++++++ ...++.+..+|++++.++.++..++.. |+++.|+.++.++ +..+++.+
T Consensus 171 a~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~-g~~~~L~~ll~~~--~~~~~~~a 247 (529)
T 1jdh_A 171 AYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA-GGMQALGLHLTDP--SQRLVQNC 247 (529)
T ss_dssp HTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHT-THHHHHHTTTTSS--CHHHHHHH
T ss_pred HHCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHC-CCHHHHHHHHHCC--CHHHHHHH
T ss_conf 81897889999987998999999870891889999999999986492227999987-8799999998679--84999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH
Q ss_conf 99999998289997531010001122325299999872179989999999999995119889999998210529999963
Q 001690 599 AEILALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSS 678 (1028)
Q Consensus 599 ~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~L 678 (1028)
+++|.+++....... ...++++.|+.++.+.++.++..++++|.+++.+++..+..+.+ .|+++.|+.+
T Consensus 248 ~~~L~~l~~~~~~~~----------~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~-~~~v~~L~~l 316 (529)
T 1jdh_A 248 LWTLRNLSDAATKQE----------GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQ-VGGIEALVRT 316 (529)
T ss_dssp HHHHHHHHTTCTTCS----------CCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHH-TTHHHHHHHH
T ss_pred HHHHHHHHCCCHHHH----------HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHH
T ss_conf 999998762880567----------88847999999983998899999999999996698788999998-5986999999
Q ss_pred HCCC--CHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 2389--95589999999998159999998-88999999663787987404899898999999998409999957789997
Q 001690 679 LDSD--QPVVRRWAMRLIHCISEGNPNGV-PLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLC 755 (1028)
Q Consensus 679 l~~~--~~~v~~~A~~~L~~Ls~~~~~~~-~~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~ 755 (1028)
+.+. ++.++..|+++|++++...+..+ ....+ ...++++.|+++|.+++...++..++++|+|++.++. .+..+.
T Consensus 317 l~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i-~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~~~~-~~~~~~ 394 (529)
T 1jdh_A 317 VLRAGDREDITEPAICALRHLTSRHQEAEMAQNAV-RLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPA-NHAPLR 394 (529)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHH-HHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGG-GHHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHH-HHHHHH
T ss_conf 98069779999999999999876996589999999-9849936999873543516899999999999813832-367888
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
Q ss_conf 104369999999711378888778876300579999999977--159999588999860588789999851298899999
Q 001690 756 KSEALKAIHEVICSMDGRHNGIRTPACQDASLLEIALAALLH--FTDPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQR 833 (1028)
Q Consensus 756 ~~g~i~~Li~lL~~~~~~~~~~~~~~~~~~~~~e~~~~aL~~--l~~~~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vk~~ 833 (1028)
+.|+++.|+.++.+. ...+...+++++.+ ++. |+ ...+++..
T Consensus 395 ~~~~i~~L~~ll~~~-------------~~~v~~~a~~~l~n~~~~~-------------~~----------~~~~i~~~ 438 (529)
T 1jdh_A 395 EQGAIPRLVQLLVRA-------------HQDTQRRTSMGGTQQQFVE-------------GV----------RMEEIVEG 438 (529)
T ss_dssp HTTHHHHHHHHHHHH-------------HHHHC-----------CBT-------------TB----------CHHHHHHH
T ss_pred HCCCHHHHHHHHHHH-------------HHHHHHHHHCCCCCHHHHC-------------CC----------CHHHHHHH
T ss_conf 758778999999987-------------5888888740567356650-------------46----------48999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHH
Q ss_conf 99998732000444422211222211234851357663210255558889898877555665784431366414760468
Q 001690 834 AASALADLSQSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPL 913 (1028)
Q Consensus 834 Aa~aL~~ls~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~L 913 (1028)
++.+|++++... .+...+.+.|++++|
T Consensus 439 ~~~al~~L~~~~-----------------------------------------------------~~~~~l~~~~~v~~l 465 (529)
T 1jdh_A 439 CTGALHILARDV-----------------------------------------------------HNRIVIRGLNTIPLF 465 (529)
T ss_dssp HHHHHHHHTTSH-----------------------------------------------------HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCCC-----------------------------------------------------HHHHHHHCCCCCCHH
T ss_conf 999999996092-----------------------------------------------------278997606875089
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 8610478820799999999986204200456789987214549999997229945888999999999
Q 001690 914 VRNLNDMESGVAEAALTALETLLADHSTLSHAIAVIVDSQGVLAILQVLEKGSLSAKTKALDLFQMI 980 (1028)
Q Consensus 914 v~lL~~~d~~v~~~A~~AL~~L~~d~~~~~~~~~~i~~~~~i~~l~~ll~~~~~~~~~~A~~~l~~i 980 (1028)
++++.+.+.+++.+|+++|+++..+. ++...+.+.||+++|.+++.++|+.++++|.++|+++
T Consensus 466 ~~ll~~~~~~v~~~a~~~l~~l~~~~----~~~~~i~~~~~~~~L~~l~~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 466 VQLLYSPIENIQRVAAGVLCELAQDK----EAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHTTSH----HHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCH----HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 99981882699999999999984487----7789999768757899986699789999999999750
No 6
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=356.52 Aligned_cols=482 Identities=12% Similarity=0.093 Sum_probs=372.4
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHC-CCHHHHHHHH-HHCCHHHHHHHHHC-CHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
Q ss_conf 86514898687999999999850-7704667877-42559899999714-989899999999998105678799999820
Q 001690 336 IIKINSDDQSRRKSALEEMKNIM-ELPQYAEKAA-KAGLIPKLVEFLKD-TRLSTEAILKCLYFLAKYSDIHKEAIVEAG 412 (1028)
Q Consensus 336 ~~~L~s~~~~~~~~al~~L~~l~-~~~~~r~~i~-~~g~ip~Lv~lL~s-~~~~r~~A~~~L~~Ls~~~~~~k~~i~~~g 412 (1028)
..++..++.+....+...+..+. ..++....+. .+|++|.++.++.+ +..+++.|++++.+.+.+. ++|..+.+.|
T Consensus 253 ~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~~~-~~R~~I~~~g 331 (810)
T 3now_A 253 KDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASSKK-DKAKALCEQG 331 (810)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSH-HHHHTTHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC-HHHHHHHHCC
T ss_conf 998546873768999999999965989888999832026999999867997889999999999981890-9999999869
Q ss_pred HHHHHHHHHCCC--CCHHHHHHHHHHHHHCH--HHHHHHHC---CCCHHHHHHHHHHCC--CHHHHHHHHHHHHCCCCCC
Q ss_conf 068999863058--76468999999862101--34465404---343299999976218--9346999999984111594
Q 001690 413 AVRRIVKQICKG--ETMPEAIEVLSELTKRE--TLGEKIGN---TKDCITIMVSLLHNN--NPNLSQKAHDVLQNLSHNT 483 (1028)
Q Consensus 413 ~i~~lv~~L~~~--e~~~~A~~~L~~Ls~~~--~~~~~i~~---~~g~I~~Lv~lL~~~--~~~~~~~A~~~L~nLs~~~ 483 (1028)
. +.|+.++.++ ..+..|+..|.+++... +....+.. ....++.|+++|.++ +.+.+++|+++|.+|+.++
T Consensus 332 v-~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~ 410 (810)
T 3now_A 332 V-DILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDA 410 (810)
T ss_dssp H-HHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSH
T ss_pred C-HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 6-799998748978899999999997441446686535320044999999999986578998789999999999983792
Q ss_pred HHHHHHHH-CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC------------------------------HH---HH
Q ss_conf 34999998-0983667874227999999999999998014910------------------------------18---99
Q 001690 484 HFAVKMAE-AGYFQPFVACFNRGSQETRALMASALRNMRLDES------------------------------SI---KT 529 (1028)
Q Consensus 484 ~n~~~i~~-~G~i~~Li~lL~~~~~~~~~~a~~~L~~L~~~~~------------------------------~~---~~ 529 (1028)
+.+..++. .|++|+|+.+|++++..++..++++|+||+...+ .+ ..
T Consensus 411 ~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~ 490 (810)
T 3now_A 411 ECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITV 490 (810)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 78999998206499999996799818999999999998579602121289999998764247655643317777999999
Q ss_pred HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 85079579999984179988899999999997108875999872899679899998311898147999999999998289
Q 001690 530 LKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHSKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEAAEILALMVGGC 609 (1028)
Q Consensus 530 i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~Ls~~~~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a~~~L~~l~~~~ 609 (1028)
++++|++|+|+.+++++++.+++.|+++|.||+.+++++..+++. |++|+|+.++.+++ ...++.|+++|.|++.+.
T Consensus 491 VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~-Gaip~Lv~LL~s~~--~~~k~~Aa~AL~nL~~~~ 567 (810)
T 3now_A 491 LANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQE-GGVKALLRMALEGT--EKGKRHATQALARIGITI 567 (810)
T ss_dssp HHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHT-THHHHHHHHHHSSC--HHHHHHHHHHHHHHHHHS
T ss_pred HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC-CCHHHHHHHHCCCC--HHHHHHHHHHHHHHHCCC
T ss_conf 998859999999985999899999999999985898899999987-89999999970598--889999999999996589
Q ss_pred CCCCCCCCCCCHHHCCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHH
Q ss_conf 997531010001122325299999872179-9899999999999951198899999982105299999632389955899
Q 001690 610 QHPQFELHHGLQELQSEHNVNVFLQLIANT-ERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSDQPVVRR 688 (1028)
Q Consensus 610 ~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~-~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~~~~v~~ 688 (1028)
..... . ..-...+++++|+.+|.++ +...+..++++|.||+..++..+..+.+ .|+++.|+.++.++++.++.
T Consensus 568 ~p~~~-~----~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~-aG~l~~Lv~LL~s~~~~Vq~ 641 (810)
T 3now_A 568 NPEVS-F----SGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIK-EQGVSKIEYYLMEDHLYLTR 641 (810)
T ss_dssp CHHHH-T----TTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHHHSCCTTHHH
T ss_pred CHHHH-H----CCHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHHHCCCCHHHHH
T ss_conf 85665-3----100231579999998678982788999999999984699899999998-68889999998289999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99999998159999998889999996637879874048998989999999984099999577899971043699999997
Q 001690 689 WAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKAIHEVIC 768 (1028)
Q Consensus 689 ~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~~g~i~~Li~lL~ 768 (1028)
.|+++|+||+. ++. ....+... .|+++.|+.++.
T Consensus 642 ~A~~~L~NLa~-~~~--~~~~~v~~-------------------------------------------~g~l~~Lv~LL~ 675 (810)
T 3now_A 642 AAAQCLCNLVM-SED--VIKMFEGN-------------------------------------------NDRVKFLALLCE 675 (810)
T ss_dssp HHHHHHHHHTT-SHH--HHHHHHSS-------------------------------------------SSHHHHHHHGGG
T ss_pred HHHHHHHHHHC-CHH--HHHHHHHC-------------------------------------------CCCHHHHHHHHC
T ss_conf 99999999967-959--99999861-------------------------------------------680899999846
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 11378888778876300579999999977159999588999860-58878999985129889999999998732000444
Q 001690 769 SMDGRHNGIRTPACQDASLLEIALAALLHFTDPTKPELQRQVGK-LEVYPSLIRVLSTGSSLAKQRAASALADLSQSTSV 847 (1028)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~e~~~~aL~~l~~~~~~~~~~~i~~-~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~ls~~~~~ 847 (1028)
+. +..+++.++++|.+++.. ++...+.+.+ .|++|.|+++|.++++++|..|+|+|.|++.++..
T Consensus 676 s~-------------d~~vq~~Aa~ALanLt~~-s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e 741 (810)
T 3now_A 676 DE-------------DEETATACAGALAIITSV-SVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEE 741 (810)
T ss_dssp CS-------------SHHHHHHHHHHHHHHHHH-CHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHH
T ss_pred CC-------------CHHHHHHHHHHHHHHHCC-CHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
T ss_conf 99-------------989999999999998679-9899999998748898999987799889999999999999869999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCC---CCCH
Q ss_conf 4222112222112348513576632102555588898988775556657844313664147604688610478---8207
Q 001690 848 SVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLNDM---ESGV 924 (1028)
Q Consensus 848 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~~~---d~~v 924 (1028)
. ...++++|++++|+++|... +.++
T Consensus 742 ------~----------------------------------------------~~~l~e~G~i~~L~~LL~~~d~~~~~i 769 (810)
T 3now_A 742 ------I----------------------------------------------AKKLFETDIMELLSGLGQLPDDTRAKA 769 (810)
T ss_dssp ------H----------------------------------------------HHHHHTSTHHHHHTTSCCCTTSTTHHH
T ss_pred ------H----------------------------------------------HHHHHHCCCHHHHHHHHHCCCCCCHHH
T ss_conf ------9----------------------------------------------999998978899999982766576799
Q ss_pred HHHHHHHHHHHHHCCC
Q ss_conf 9999999998620420
Q 001690 925 AEAALTALETLLADHS 940 (1028)
Q Consensus 925 ~~~A~~AL~~L~~d~~ 940 (1028)
.+.|+.||.+++.-+.
T Consensus 770 ~e~Al~aL~~ll~~g~ 785 (810)
T 3now_A 770 REVATQCLAAAERYRI 785 (810)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCC
T ss_conf 9999999999986798
No 7
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=1.00 E-value=1 Score=346.83 Aligned_cols=417 Identities=15% Similarity=0.143 Sum_probs=326.1
Q ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH--HHHHHHHCCCCHHHHHHHC-CCCHHHHHHHHHHHHHHH-CCCCH
Q ss_conf 4329999997621893469999999841115943--4999998098366787422-799999999999999801-49101
Q 001690 451 KDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTH--FAVKMAEAGYFQPFVACFN-RGSQETRALMASALRNMR-LDESS 526 (1028)
Q Consensus 451 ~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~~--n~~~i~~~G~i~~Li~lL~-~~~~~~~~~a~~~L~~L~-~~~~~ 526 (1028)
...|+.+|..++++|++.+..|+..++.+.+.+. ....++++|+||+|+++|+ ++++.+|..|+++|+||+ .++++
T Consensus 56 ~~~i~~~v~~l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~ 135 (510)
T 3ul1_B 56 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (510)
T ss_dssp SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 40099999984599999999999999998657889629999988888999998778998999999999999996499999
Q ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHCCCCHHHHHHHHHCCCCC---HHHHHHHHHHH
Q ss_conf 8998507957999998417998889999999999710887-5999872899679899998311898---14799999999
Q 001690 527 IKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHSK-MVKHLLLDPATIPLLLGLIQFVRSD---PHLKHEAAEIL 602 (1028)
Q Consensus 527 ~~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~Ls~~~~-~~~~lv~~~g~i~~L~~lL~~~~~~---~~l~~~a~~~L 602 (1028)
+..+++.|+||.|+++|.+++..+++.|+++|+||+.+.+ .+..++.. |++++|+.++...+.. ..+.+.++++|
T Consensus 136 ~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~-G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L 214 (510)
T 3ul1_B 136 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKH-GAIDPLLALLAVPDLSTLACGYLRNLTWTL 214 (510)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHT-TCHHHHHHHTCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC-CCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 9999978879999998869998999999999999971889999999986-981799999973461044599999999999
Q ss_pred HHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCC
Q ss_conf 99982899975310100011223252999998721799899999999999951198899999982105299999632389
Q 001690 603 ALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSD 682 (1028)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~ 682 (1028)
++++.+...... ... . .++++.|+.++.++
T Consensus 215 ~nl~~~~~~~~~-------~~~------------------------------------------~-~~~lp~L~~LL~~~ 244 (510)
T 3ul1_B 215 SNLCRNKNPAPP-------LDA------------------------------------------V-EQILPTLVRLLHHN 244 (510)
T ss_dssp HHHHCCCSSCCC-------HHH------------------------------------------H-HHHHHHHHHHTTCS
T ss_pred HHHHHCCCCHHH-------HHH------------------------------------------H-HHHHHHHHHHHHCC
T ss_conf 987531110257-------999------------------------------------------9-76999999998168
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
Q ss_conf 95589999999998159999998889999996637879874048998989999999984099999577899971043699
Q 001690 683 QPVVRRWAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKA 762 (1028)
Q Consensus 683 ~~~v~~~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~~g~i~~ 762 (1028)
+.+++..|+++|++|+. ......... ...|+++.|+.+|.+++. .++..++.+|+|+..+++..+..+.+.|+++.
T Consensus 245 ~~~v~~~A~~aL~~L~~-~~~~~~~~i--~~~g~i~~Lv~lL~~~~~-~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~ 320 (510)
T 3ul1_B 245 DPEVLADSCWAISYLTD-GPNERIEMV--VKKGVVPQLVKLLGATEL-PIVTPALRAIGNIVTGTDEQTQKVIDAGALAV 320 (510)
T ss_dssp CHHHHHHHHHHHHHHTS-SCHHHHHHH--HTTTCHHHHHHHHTCSCH-HHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGG
T ss_pred CHHHHHHHHHHHHHHHH-CHHHHHHHH--HHCCCCHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
T ss_conf 79999999999999860-215667899--863651255566138871-34268899998862377888888761241278
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999711378888778876300579999999977159999588999860588789999851298899999999987320
Q 001690 763 IHEVICSMDGRHNGIRTPACQDASLLEIALAALLHFTDPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALADLS 842 (1028)
Q Consensus 763 Li~lL~~~~~~~~~~~~~~~~~~~~~e~~~~aL~~l~~~~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~ls 842 (1028)
|+.+|.+. ...+.+.+++++.+++. .+......+.+.|++|.|+.+|+++++.+|+.|+|+|+|++
T Consensus 321 L~~LL~~~-------------~~~v~~~A~~aL~nl~a-~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~ 386 (510)
T 3ul1_B 321 FPSLLTNP-------------KTNIQKEATWTMSNITA-GRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYT 386 (510)
T ss_dssp CC-CTTCS-------------SHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-------------CHHHHHHHHHHHHHHHC-CCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 88872499-------------88999999999999970-84989999885387889999973898899999999999987
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCC
Q ss_conf 00444422211222211234851357663210255558889898877555665784431366414760468861047882
Q 001690 843 QSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLNDMES 922 (1028)
Q Consensus 843 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~~~d~ 922 (1028)
..... .....|++.|+|++|+++|++.|.
T Consensus 387 ~~~~~---------------------------------------------------~~~~~L~~~g~i~~L~~LL~~~d~ 415 (510)
T 3ul1_B 387 SGGTV---------------------------------------------------EQIVYLVHCGIIEPLMNLLSAKDT 415 (510)
T ss_dssp HHCCH---------------------------------------------------HHHHHHHHTTCHHHHHHGGGCSCH
T ss_pred CCCCH---------------------------------------------------HHHHHHHHCCCHHHHHHHHCCCCH
T ss_conf 06999---------------------------------------------------999999979789999998669999
Q ss_pred CHHHHHHHHHHHHHHCCCC---HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0799999999986204200---4567899872145499999972299458889999999998445566
Q 001690 923 GVAEAALTALETLLADHST---LSHAIAVIVDSQGVLAILQVLEKGSLSAKTKALDLFQMIQKHTRIT 987 (1028)
Q Consensus 923 ~v~~~A~~AL~~L~~d~~~---~~~~~~~i~~~~~i~~l~~ll~~~~~~~~~~A~~~l~~i~~~~~~~ 987 (1028)
+++..++++|.+|+.-++. .......+.++||+..|..|+.|.+..++++|..+|++||..++..
T Consensus 416 ~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~iie~yf~~~~~~ 483 (510)
T 3ul1_B 416 KIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEEE 483 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999985742665899999998685999999875998999999999999977985333
No 8
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=344.64 Aligned_cols=526 Identities=12% Similarity=0.136 Sum_probs=401.0
Q ss_pred HHHCHHHHHHHHHCCC--CCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCCHH
Q ss_conf 9820068999863058--7646899999986210134465404343299999976218-934699999998411159434
Q 001690 409 VEAGAVRRIVKQICKG--ETMPEAIEVLSELTKRETLGEKIGNTKDCITIMVSLLHNN-NPNLSQKAHDVLQNLSHNTHF 485 (1028)
Q Consensus 409 ~~~g~i~~lv~~L~~~--e~~~~A~~~L~~Ls~~~~~~~~i~~~~g~I~~Lv~lL~~~-~~~~~~~A~~~L~nLs~~~~n 485 (1028)
...|+++.++.+|.+. ..+..|+.+|.+++....++..+....|+++.|+.+|.++ +++.+..|+.+|.+|+..+++
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~ 90 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREG 90 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHH
T ss_pred HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH
T ss_conf 65530999999873999999999999999997787539999865076999999986489999999999999998469165
Q ss_pred HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC-
Q ss_conf 99999809836678742279999999999999980149-1018998507957999998417998889999999999710-
Q 001690 486 AVKMAEAGYFQPFVACFNRGSQETRALMASALRNMRLD-ESSIKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIA- 563 (1028)
Q Consensus 486 ~~~i~~~G~i~~Li~lL~~~~~~~~~~a~~~L~~L~~~-~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~Ls~- 563 (1028)
+..+++.|+++.|+.+|.++++.++..++++|.+++.. +..+..+.+.|+++.|+++|++++...+..++.+|.+++.
T Consensus 91 ~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~ 170 (644)
T 2z6h_A 91 LLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYG 170 (644)
T ss_dssp HHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 89999859899999998089899999999999999737610389999779948999987759789999999999999826
Q ss_pred CCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHH
Q ss_conf 88759998728996798999983118981479999999999982899975310100011223252999998721799899
Q 001690 564 HSKMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEAAEILALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERET 643 (1028)
Q Consensus 564 ~~~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~ 643 (1028)
+++++..++.. |+++.|+.++.+.+. ...+..++.+|++++.... ....+.+.|+++.|+.++..+++.+
T Consensus 171 ~~~~~~~i~~~-g~v~~Lv~lL~~~~~-~~~~~~a~~~L~nLs~~~~--------~~~~l~~~g~l~~L~~ll~~~~~~~ 240 (644)
T 2z6h_A 171 NQESKLIILAS-GGPQALVNIMRTYTY-EKLLWTTSRVLKVLSVCSS--------NKPAIVEAGGMQALGLHLTDPSQRL 240 (644)
T ss_dssp CHHHHHHHHHT-THHHHHHHHHTTCCC-HHHHHHHHHHHHHHTTCTT--------HHHHHHHTTHHHHHHTTTTCSCHHH
T ss_pred CCHHHHHHHHC-CCHHHHHHHHHCCCH-HHHHHHHHHHHHHHHCCCC--------CHHHHHHCCCHHHHHHHHHCCCHHH
T ss_conf 95899999986-984999999972882-8899999999999806950--------1899998787999999982698899
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99999999995119889999998210529999963238995589999999998159999998889999996637879874
Q 001690 644 KIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSDQPVVRRWAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAI 723 (1028)
Q Consensus 644 ~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~~~~v~~~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~l 723 (1028)
+..++++|.+++...... ... .++++.|+.++.+++.+++..|+++|++|+...+ .....+ ...++++.|+.+
T Consensus 241 ~~~a~~~L~nL~~~~~~~---~~~-~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~~~~--~~~~~v-~~~g~v~~Lv~l 313 (644)
T 2z6h_A 241 VQNCLWTLRNLSDAATKQ---EGM-EGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNY--KNKMMV-CQVGGIEALVRT 313 (644)
T ss_dssp HHHHHHHHHHHGGGCTTC---CSC-HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCH--HHHHHH-HHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHH---HHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH--HHHHHH-HHCCCHHHHHHH
T ss_conf 999999999986255143---436-3599999999738988999999999999871998--999999-975887999999
Q ss_pred CCCCC-CHHHHHHHHHHHHCCCCCCH---HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 04899-89899999999840999995---778999710436999999971137888877887630057999999997715
Q 001690 724 FTCSP-DVEERSLAAGIISQLPKDDI---YVDEVLCKSEALKAIHEVICSMDGRHNGIRTPACQDASLLEIALAALLHFT 799 (1028)
Q Consensus 724 L~~~~-~~~~~~~a~~~L~nL~~~~~---~~~~~l~~~g~i~~Li~lL~~~~~~~~~~~~~~~~~~~~~e~~~~aL~~l~ 799 (1028)
+.+.+ ...++..|+++|+|++.++. ..+..+.+.|+++.|+.+|.+. . ...+.+.+++++.+++
T Consensus 314 L~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~lL~~~------~------~~~v~~~a~~~L~nLa 381 (644)
T 2z6h_A 314 VLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP------S------HWPLIKATVGLIRNLA 381 (644)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHTTSTT------C------CHHHHHHHHHHHHHHT
T ss_pred HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCC------C------CHHHHHHHHHHHHHHC
T ss_conf 980498579999999999998558944799999999746918999985766------7------4579999999999973
Q ss_pred CCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH--HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 99995889998605887899998512988999999999873--2000444422211222211234851357663210255
Q 001690 800 DPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALAD--LSQSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSW 877 (1028)
Q Consensus 800 ~~~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~--ls~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 877 (1028)
. ++..+..+.+.|++|.|+++|.++++++|+.|+|+++| +...... .++.. .. ...
T Consensus 382 ~--~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~----~~v~~----------~a----~~a-- 439 (644)
T 2z6h_A 382 L--CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRM----EEIVE----------GC----TGA-- 439 (644)
T ss_dssp T--SGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCH----HHHHH----------HH----HHH--
T ss_pred C--CHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHCCCCCH----HHHHH----------HH----HHH--
T ss_conf 6--98777999976879999999850032466675204553011135659----99999----------99----999--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHH
Q ss_conf 55888989887755566578443136641476046886104788207999999999862042004567899872145499
Q 001690 878 CCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLNDMESGVAEAALTALETLLADHSTLSHAIAVIVDSQGVLA 957 (1028)
Q Consensus 878 ~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~~~d~~v~~~A~~AL~~L~~d~~~~~~~~~~i~~~~~i~~ 957 (1028)
++....+..+.+.+.+.|++++|+++|.+.+.+++..|+++|+++..+. +....+.+.||+++
T Consensus 440 -------------L~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~----~~~~~i~~~g~l~~ 502 (644)
T 2z6h_A 440 -------------LHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDK----EAAEAIEAEGATAP 502 (644)
T ss_dssp -------------HHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSH----HHHHHHHHTTCHHH
T ss_pred -------------HHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH----HHHHHHHHCCCHHH
T ss_conf -------------9999619999999874786799999971897789999999999997298----77899997598668
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHCCC
Q ss_conf 999972299458889999999998445566654101-00388762046
Q 001690 958 ILQVLEKGSLSAKTKALDLFQMIQKHTRITDTLLQR-SERILIQLLDD 1004 (1028)
Q Consensus 958 l~~ll~~~~~~~~~~A~~~l~~i~~~~~~~~~~~~~-~~~~Lv~~~~~ 1004 (1028)
|.+++.++++.++..|.++|.++..... ..|... +...+..++++
T Consensus 503 L~~ll~~~~~~vr~~A~~aL~~l~~~~~--~~~~~~~~~~il~~~~~~ 548 (644)
T 2z6h_A 503 LTELLHSRNEGVATYAAAVLFRMSEDKP--QDYKKRLSVELTSSLFRT 548 (644)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHTTTSC--HHHHHHHHHHHHHHHSCC
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHCCCC--HHHHCCCCHHHHHHHHHC
T ss_conf 9998769988999999999999864683--865304456999999817
No 9
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=1.00 E-value=1 Score=341.26 Aligned_cols=482 Identities=16% Similarity=0.184 Sum_probs=307.2
Q ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHC-CCCHHHHHHHCCC-CHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 432999999762189346999999984111594349999980-9836678742279-99999999999998014910189
Q 001690 451 KDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNTHFAVKMAEA-GYFQPFVACFNRG-SQETRALMASALRNMRLDESSIK 528 (1028)
Q Consensus 451 ~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~~n~~~i~~~-G~i~~Li~lL~~~-~~~~~~~a~~~L~~L~~~~~~~~ 528 (1028)
.|+++.|+.+|+++++.++..|+.+|.+++.+++++..++.. |++++|+++|.++ +++++..++.+|.+++..++++.
T Consensus 16 ~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~ 95 (529)
T 1jdh_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 95 (529)
T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 73499999986789989999999999998747811789986734699999998548999999999999999874924279
Q ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 9850795799999841799888999999999971088-759998728996798999983118981479999999999982
Q 001690 529 TLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHS-KMVKHLLLDPATIPLLLGLIQFVRSDPHLKHEAAEILALMVG 607 (1028)
Q Consensus 529 ~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~Ls~~~-~~~~~lv~~~g~i~~L~~lL~~~~~~~~l~~~a~~~L~~l~~ 607 (1028)
.+.+.|++|.|+++|+++++.++..|+++|++++.++ ..+..+++. |++|.|++++.+++ ..++..++.+|.+++.
T Consensus 96 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~L~~ll~~~~--~~~~~~~~~~L~~la~ 172 (529)
T 1jdh_A 96 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA-GGLQKMVALLNKTN--VKFLAITTDCLQILAY 172 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHH-THHHHHHHGGGCCC--HHHHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHC-CCHHHHHHHHHCCC--HHHHHHHHHHHHHHHH
T ss_conf 99984999999998839988999999999999705884208999883-99799999980698--8899999999999981
Q ss_pred CCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHH
Q ss_conf 899975310100011223252999998721799-8999999999999511988999999821052999996323899558
Q 001690 608 GCQHPQFELHHGLQELQSEHNVNVFLQLIANTE-RETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSDQPVV 686 (1028)
Q Consensus 608 ~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~-~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~~~~v 686 (1028)
+..+ ....+...|+++.|+.+++..+ ...+..+..+|.+++.++. .+..+.+ .|+++.|+.++.+++..+
T Consensus 173 ~~~~-------~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~-~~~~~~~-~g~~~~L~~ll~~~~~~~ 243 (529)
T 1jdh_A 173 GNQE-------SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKPAIVE-AGGMQALGLHLTDPSQRL 243 (529)
T ss_dssp TCHH-------HHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHHHHHH-TTHHHHHHTTTTSSCHHH
T ss_pred CCHH-------HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC-CHHHHHH-CCCHHHHHHHHHCCCHHH
T ss_conf 8978-------899999879989999998708918899999999999864922-2799998-787999999986798499
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH
Q ss_conf 99999999981599999988899999966378798740489989899999999840999995778999710436999999
Q 001690 687 RRWAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKAIHEV 766 (1028)
Q Consensus 687 ~~~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~~g~i~~Li~l 766 (1028)
+..++++|.+++...+. . . ...+.++.|++++.+++ .+++..|+++|+|++.++...+..+.+.|+++.|+.+
T Consensus 244 ~~~a~~~L~~l~~~~~~-~--~---~~~~~i~~L~~ll~~~~-~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~l 316 (529)
T 1jdh_A 244 VQNCLWTLRNLSDAATK-Q--E---GMEGLLGTLVQLLGSDD-INVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRT 316 (529)
T ss_dssp HHHHHHHHHHHHTTCTT-C--S---CCHHHHHHHHHHTTCSC-HHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHH-H--H---HHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999987628805-6--7---88847999999983998-8999999999999966987889999985986999999
Q ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHCCCHHHHHHHHHCCC-HHHHHHHHHHHHHHHH
Q ss_conf 97113788887788763005799999999771599--99588999860588789999851298-8999999999873200
Q 001690 767 ICSMDGRHNGIRTPACQDASLLEIALAALLHFTDP--TKPELQRQVGKLEVYPSLIRVLSTGS-SLAKQRAASALADLSQ 843 (1028)
Q Consensus 767 L~~~~~~~~~~~~~~~~~~~~~e~~~~aL~~l~~~--~~~~~~~~i~~~~~i~~Lv~lL~~~~-~~vk~~Aa~aL~~ls~ 843 (1028)
+.+. + ....+.+.++.+|.+++.. .+...+..+.+.|++|.|+++|++++ +.++..|+++|+|++.
T Consensus 317 l~~~-----~------~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~nl~~ 385 (529)
T 1jdh_A 317 VLRA-----G------DREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL 385 (529)
T ss_dssp HHHH-----T------TCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTT
T ss_pred HHCC-----C------CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9806-----9------7799999999999998769965899999999849936999873543516899999999999813
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCC
Q ss_conf 04444222112222112348513576632102555588898988775556657844313664147604688610478820
Q 001690 844 STSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLNDMESG 923 (1028)
Q Consensus 844 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~~~d~~ 923 (1028)
+... . ..+.+.|++++|+++|.+.+.+
T Consensus 386 ~~~~------~-----------------------------------------------~~~~~~~~i~~L~~ll~~~~~~ 412 (529)
T 1jdh_A 386 CPAN------H-----------------------------------------------APLREQGAIPRLVQLLVRAHQD 412 (529)
T ss_dssp SGGG------H-----------------------------------------------HHHHHTTHHHHHHHHHHHHHHH
T ss_pred CHHH------H-----------------------------------------------HHHHHCCCHHHHHHHHHHHHHH
T ss_conf 8323------6-----------------------------------------------7888758778999999987588
Q ss_pred HHHH----------------------HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 7999----------------------999999862042004567899872145499999972299458889999999998
Q 001690 924 VAEA----------------------ALTALETLLADHSTLSHAIAVIVDSQGVLAILQVLEKGSLSAKTKALDLFQMIQ 981 (1028)
Q Consensus 924 v~~~----------------------A~~AL~~L~~d~~~~~~~~~~i~~~~~i~~l~~ll~~~~~~~~~~A~~~l~~i~ 981 (1028)
++.. ++.+|++|..+. .....+.+.|++++|++++.++++.++..|.++|.++.
T Consensus 413 v~~~a~~~l~n~~~~~~~~~~~i~~~~~~al~~L~~~~----~~~~~l~~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~ 488 (529)
T 1jdh_A 413 TQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDV----HNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA 488 (529)
T ss_dssp HC-----------CBTTBCHHHHHHHHHHHHHHHTTSH----HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCC----HHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 88887405673566504648999999999999996092----27899760687508999981882699999999999984
Q ss_pred HHHHHHHHHHCCCC-HHHHHHCCC--CCHHHHHHHHHHHHC
Q ss_conf 44556665410100-388762046--202799999999734
Q 001690 982 KHTRITDTLLQRSE-RILIQLLDD--DALKKKVALVLMQMN 1019 (1028)
Q Consensus 982 ~~~~~~~~~~~~~~-~~Lv~~~~~--~~~~~~a~~~L~~l~ 1019 (1028)
..++.+..+...+. .+|.+++++ +.++..|..+|.+|+
T Consensus 489 ~~~~~~~~i~~~~~~~~L~~l~~~~~~~v~~~a~~aL~~l~ 529 (529)
T 1jdh_A 489 QDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529 (529)
T ss_dssp TSHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf 48777899997687578999866997899999999997509
No 10
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=1.00 E-value=1 Score=340.53 Aligned_cols=417 Identities=15% Similarity=0.141 Sum_probs=328.4
Q ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC--HHHHHHHHCCCCHHHHHHHC-CCCHHHHHHHHHHHHHHHC-CCCH
Q ss_conf 432999999762189346999999984111594--34999998098366787422-7999999999999998014-9101
Q 001690 451 KDCITIMVSLLHNNNPNLSQKAHDVLQNLSHNT--HFAVKMAEAGYFQPFVACFN-RGSQETRALMASALRNMRL-DESS 526 (1028)
Q Consensus 451 ~g~I~~Lv~lL~~~~~~~~~~A~~~L~nLs~~~--~n~~~i~~~G~i~~Li~lL~-~~~~~~~~~a~~~L~~L~~-~~~~ 526 (1028)
...++.++..+.+++++.+..|+..++++...+ .....+++.|+||.|+.+|. +.++.++..|+++|++++. +++.
T Consensus 75 ~~~l~~lv~~l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~ 154 (529)
T 3tpo_A 75 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 154 (529)
T ss_dssp SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 88999999985699999999999999998727898449999988899999998768998999999999999997499999
Q ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHCCCCHHHHHHHHHCCCCC---HHHHHHHHHHH
Q ss_conf 899850795799999841799888999999999971088-75999872899679899998311898---14799999999
Q 001690 527 IKTLKDRQFIHNVIQMLSSNSPVCKSACLKCIKTLIAHS-KMVKHLLLDPATIPLLLGLIQFVRSD---PHLKHEAAEIL 602 (1028)
Q Consensus 527 ~~~i~~~g~i~~Lv~lL~~~~~~~~~~A~~aL~~Ls~~~-~~~~~lv~~~g~i~~L~~lL~~~~~~---~~l~~~a~~~L 602 (1028)
+..+.+.|+||+|+.+|.+++..+++.|+++|+||+.+. ..+..++.. |++++|+.++...... ..+.+.++++|
T Consensus 155 ~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~-g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L 233 (529)
T 3tpo_A 155 TKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKH-GAIDPLLALLAVPDLSTLACGYLRNLTWTL 233 (529)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHT-TCHHHHHHTTCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC-CCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 9999988889999998769998999999999998744688999999873-872789998732440376899999999999
Q ss_pred HHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCC
Q ss_conf 99982899975310100011223252999998721799899999999999951198899999982105299999632389
Q 001690 603 ALMVGGCQHPQFELHHGLQELQSEHNVNVFLQLIANTERETKIQFLHLLVKLCYKSEKVRNLIESNNDAITQLFSSLDSD 682 (1028)
Q Consensus 603 ~~l~~~~~~~~~~~~~~~~~l~~~~~i~~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~i~~~~g~i~~Lv~Ll~~~ 682 (1028)
++++.+...... .. .. .++++.|+.++.++
T Consensus 234 ~nl~~~~~~~~~-------~~------------------------------------------~~-~~~lp~L~~LL~~~ 263 (529)
T 3tpo_A 234 SNLCRNKNPAPP-------LD------------------------------------------AV-EQILPTLVRLLHHN 263 (529)
T ss_dssp HHHHCCCTTCCC-------HH------------------------------------------HH-HHHHHHHHHHTTSS
T ss_pred HHHHHCCCCHHH-------HH------------------------------------------HH-HHHHHHHHHHHCCC
T ss_conf 998741321136-------99------------------------------------------98-64899999995599
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
Q ss_conf 95589999999998159999998889999996637879874048998989999999984099999577899971043699
Q 001690 683 QPVVRRWAMRLIHCISEGNPNGVPLPPSPGKETAINTVAAIFTCSPDVEERSLAAGIISQLPKDDIYVDEVLCKSEALKA 762 (1028)
Q Consensus 683 ~~~v~~~A~~~L~~Ls~~~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~nL~~~~~~~~~~l~~~g~i~~ 762 (1028)
+++++..|+|+|++++. ......... ...|+++.|+.+|.+++. .++..++.+|+|++.+++..+..+.+.|+++.
T Consensus 264 ~~~v~~~a~~aL~~l~~-~~~~~~~~v--~~~g~i~~Lv~lL~~~~~-~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~ 339 (529)
T 3tpo_A 264 DPEVLADSCWAISYLTD-GPNERIEMV--VKKGVVPQLVKLLGATEL-PIVTPALRAIGNIVTGTDEQTQKVIDAGALAV 339 (529)
T ss_dssp CHHHHHHHHHHHHHHHS-SCHHHHHHH--HTTTCHHHHHHHHTCSCH-HHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGG
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHH--HHCCCHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
T ss_conf 68899999999998652-000567899--963602889988618970-47788999999997164687788760242789
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999711378888778876300579999999977159999588999860588789999851298899999999987320
Q 001690 763 IHEVICSMDGRHNGIRTPACQDASLLEIALAALLHFTDPTKPELQRQVGKLEVYPSLIRVLSTGSSLAKQRAASALADLS 842 (1028)
Q Consensus 763 Li~lL~~~~~~~~~~~~~~~~~~~~~e~~~~aL~~l~~~~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vk~~Aa~aL~~ls 842 (1028)
|+.+|.+. ...+.+.++++|.+++. .++.....+.+.|++|.|+.+|.++++.+|..|+|+|+|++
T Consensus 340 L~~LL~~~-------------~~~i~~~a~~aL~nl~~-~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~ 405 (529)
T 3tpo_A 340 FPSLLTNP-------------KTNIQKEATWTMSNITA-GRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYT 405 (529)
T ss_dssp HHHHTTCS-------------SHHHHHHHHHHHHHHHT-SCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-------------CHHHHHHHHHHHHHHHC-CCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99998099-------------88898999999999861-63888889996583799999856999999999999999998
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCC
Q ss_conf 00444422211222211234851357663210255558889898877555665784431366414760468861047882
Q 001690 843 QSTSVSVSNATLTAKQTKTLMPMFDMTKLLLSMSWCCSSWGDHQSSCSVHGAACSPRETFCLVKADAVKPLVRNLNDMES 922 (1028)
Q Consensus 843 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~c~~h~~~~~~~~~~~l~~~gai~~Lv~lL~~~d~ 922 (1028)
.+... .....|++.|+|+||+++|++.|.
T Consensus 406 ~~~~~---------------------------------------------------~~~~~l~~~g~i~~L~~LL~~~d~ 434 (529)
T 3tpo_A 406 SGGTV---------------------------------------------------EQIVYLVHCGIIEPLMNLLSAKDT 434 (529)
T ss_dssp HHSCH---------------------------------------------------HHHHHHHHTTCHHHHHHGGGCSCH
T ss_pred CCCCH---------------------------------------------------HHHHHHHHCCCHHHHHHHHCCCCH
T ss_conf 18999---------------------------------------------------999999989689999998669999
Q ss_pred CHHHHHHHHHHHHHHCCCC---HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0799999999986204200---4567899872145499999972299458889999999998445566
Q 001690 923 GVAEAALTALETLLADHST---LSHAIAVIVDSQGVLAILQVLEKGSLSAKTKALDLFQMIQKHTRIT 987 (1028)
Q Consensus 923 ~v~~~A~~AL~~L~~d~~~---~~~~~~~i~~~~~i~~l~~ll~~~~~~~~~~A~~~l~~i~~~~~~~ 987 (1028)
+++..+++||.+|+.-++. .......+.++||+..|..|+.|.+.+++++|..+|++||..++..
T Consensus 435 ~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~iie~yf~~~~~~ 502 (529)
T 3tpo_A 435 KIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFSVEEEE 502 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSSHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999986862676899999998774999999874999999999999999977985433
Done!