BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001700
(1025 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant
Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 127 bits (319), Expect = 3e-29, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 16/315 (5%)
Query: 704 DVLNACSPEKLAGDLHLFDVSLMFTAEELSHAPAEVIGRSCHGTLYKATLDSGSILAVKR 763
DV PE G L F + + A + + ++GR G +YK L G ++AVKR
Sbjct: 3 DVPAEEDPEVHLGQLKRFSLRELQVASD-NFXNKNILGRGGFGKVYKGRLADGXLVAVKR 61
Query: 764 LREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQ 822
L+E +G + +F EV+ + H NL+ L+G+ P E+L++ Y+ S+A L+
Sbjct: 62 LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLR 119
Query: 823 ETDPRKLPPLSIDERLRVAVDVARCLNYLHN--ERAIPHGNLKSTNILLEAPTMNAVLTD 880
E P PPL +R R+A+ AR L YLH+ + I H ++K+ NILL+ AV+ D
Sbjct: 120 ER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGD 177
Query: 881 YSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSG 940
+ L +++ G +G+ PE+ ST K S K+DV+ +G++LLEL+TG+ +
Sbjct: 178 FGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAF 235
Query: 941 EIV-CVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILP 999
++ + V L DWV+ L E + D + + E+ + ++QVAL C
Sbjct: 236 DLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE----VEQLIQVALLCTQS 291
Query: 1000 AS-ERPDMMSVFEEL 1013
+ ERP M V L
Sbjct: 292 SPMERPKMSEVVRML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 16/316 (5%)
Query: 704 DVLNACSPEKLAGDLHLFDVSLMFTAEELSHAPAEVIGRSCHGTLYKATLDSGSILAVKR 763
DV PE G L F + + A + + + ++GR G +YK L G+++AVKR
Sbjct: 11 DVPAEEDPEVHLGQLKRFSLRELQVASD-NFSNKNILGRGGFGKVYKGRLADGTLVAVKR 69
Query: 764 LREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQ 822
L+E +G + +F EV+ + H NL+ L+G+ P E+L++ Y+ S+A L+
Sbjct: 70 LKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLR 127
Query: 823 ETDPRKLPPLSIDERLRVAVDVARCLNYLHN--ERAIPHGNLKSTNILLEAPTMNAVLTD 880
E P PPL +R R+A+ AR L YLH+ + I H ++K+ NILL+ AV+ D
Sbjct: 128 ER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGD 185
Query: 881 YSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSG 940
+ L +++ G +G+ PE+ ST K S K+DV+ +G++LLEL+TG+ +
Sbjct: 186 FGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAF 243
Query: 941 EIV-CVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILP 999
++ + V L DWV+ L E + D + + E+ + ++QVAL C
Sbjct: 244 DLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEE----VEQLIQVALLCTQS 299
Query: 1000 AS-ERPDMMSVFEELS 1014
+ ERP M V L
Sbjct: 300 SPMERPKMSEVVRMLE 315
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 239/575 (41%), Gaps = 90/575 (15%)
Query: 15 ALG-QSDFEALLQLKKGIAKDPSGQIIDSWDTKSLSSDGCPRNWFGITCTNGYVTSIMLN 73
A+G QS + + QL P ++ W SS+ P + G+TC + VTSI L+
Sbjct: 1 AMGSQSLYREIHQLISFKDVLPDKNLLPDW-----SSNKNPCTFDGVTCRDDKVTSIDLS 55
Query: 74 DMGLVGNFSFPTIIGLKMLCNVS----VSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLI 129
L N F + + +SN+ + G+++ SL LDLS N G +
Sbjct: 56 SKPL--NVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPV 113
Query: 130 P---------------------------SGIVSLKNLMLLNISSNSFEGTFPSGF---GG 159
SG + L +L +L++S+NS G G+ G
Sbjct: 114 TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDG 173
Query: 160 LGKLKYLDLRANRFGGDI---------------------MHLLSQLGSVVHVDLSNNQXX 198
G+LK+L + N+ GD+ + L ++ H+D+S N+
Sbjct: 174 CGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK-- 231
Query: 199 XXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNNHLVGAIPSF- 257
+ LNIS N VG + P +P +L+ + N G IP F
Sbjct: 232 -LSGDFSRAISTCTELKLLNISSNQFVGPIPP---LP-LKSLQYLSLAENKFTGEIPDFL 286
Query: 258 -NFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXXXXXXXNQLEGPVGSITSAT-LKKVN 315
+L L L N G++P E P+ ++ LK ++
Sbjct: 287 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLD 346
Query: 316 LSSNKLSGSLPARVGHCT----IVDLSNNRLSGDL--SRMQNWGNYVEDIHLSSNFLTGM 369
LS N+ SG LP + + + +DLS+N SG + + QN N +++++L +N TG
Sbjct: 347 LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 406
Query: 370 VPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFTSTKLT 429
+P S L S +S N L G +P+ LG+ +L+ + L LN L G + L
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 430 DLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKFHNLVYLN 489
L L N+ +G +P +G + +L + L+ N L+G + I + NL L
Sbjct: 467 TLILDFNDLTGEIP---------SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 490 LSNNKFEGSIPDGLPN--GLKEFNVSFNNLSGVVP 522
LSNN F G+IP L + L +++ N +G +P
Sbjct: 518 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 155/563 (27%), Positives = 231/563 (41%), Gaps = 104/563 (18%)
Query: 77 LVGNFS--FPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV 134
L G+FS T LK+L ++S+NQ +G I + ++SL++L L+ N F G IP +
Sbjct: 232 LSGDFSRAISTCTELKLL---NISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLS 287
Query: 135 -SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDI-MHLLSQLGSVVHVDL 192
+ L L++S N F G P FG L+ L L +N F G++ M L ++ + +DL
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 193 SNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNNHLVG 252
S N+ L++S N+ G + P+ + L+ NN G
Sbjct: 348 SFNEFSGELPESLTNLSASLLT--LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 405
Query: 253 AIP-SFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXXXXXXXNQLEG--PVGSITSA 309
IP + + L L L N LSG++P + N LEG P +
Sbjct: 406 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL--NMLEGEIPQELMYVK 463
Query: 310 TLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRMQNWGNYVEDIHLSSNFLTGM 369
TL+ + L N L+G +P+ + +CT + NW I LS+N LTG
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNL---------------NW------ISLSNNRLTGE 502
Query: 370 VPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFT-STKL 428
+P + L K+SNNS G++PA LG L +DL+ N NG + + F S K+
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 562
Query: 429 TDLNLSGNNF------------SGPLPLQEIQ------------NNPSTGSTQ------- 457
++G + G L E Q NP +++
Sbjct: 563 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 622
Query: 458 -----NLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLSNNKFEGSIPDG---------- 502
N S+ LD++YN LSG + I L LNL +N GSIPD
Sbjct: 623 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 682
Query: 503 ----------LPNG------LKEFNVSFNNLSGVVPE--NLRNFPDSAFHPGNSLLTFP- 543
+P L E ++S NNLSG +PE FP + F L +P
Sbjct: 683 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 742
Query: 544 --NSPSQQDVPDLTLRGHGNHMK 564
PS D R HG ++
Sbjct: 743 PRCDPSNADGYAHHQRSHGRRLE 765
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 152/356 (42%), Gaps = 78/356 (21%)
Query: 246 SNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXXXXXXXNQLEGP--- 302
SN+H+ G++ F SL L L N LSG + N L+ P
Sbjct: 82 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 141
Query: 303 ------------------------VGSITS---ATLKKVNLSSNKLSGSLPAR------- 328
VG + S LK + +S NK+SG +
Sbjct: 142 SGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEF 201
Query: 329 --------------VGHCTI---VDLSNNRLSGDLSRMQNWGNYVEDIHLSSNFLTGMVP 371
+G C+ +D+S N+LSGD SR + ++ +++SSN G +P
Sbjct: 202 LDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Query: 372 NQTSQFLRLTSFKVSNNSLEGDLPAVL-GTYPELKVIDLSLNHLNGFLLPSFFTSTKLTD 430
+ L+ S ++ N G++P L G L +DLS NH G + P F + + L
Sbjct: 262 PLPLKSLQYLS--LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 319
Query: 431 LNLSGNNFSGPLPLQ-----------EIQNNPSTG----STQNL--SLTSLDLAYNSLSG 473
L LS NNFSG LP+ ++ N +G S NL SL +LDL+ N+ SG
Sbjct: 320 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 379
Query: 474 RLLPGISK--FHNLVYLNLSNNKFEGSIPDGLPNG--LKEFNVSFNNLSGVVPENL 525
+LP + + + L L L NN F G IP L N L ++SFN LSG +P +L
Sbjct: 380 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 145/571 (25%), Positives = 236/571 (41%), Gaps = 89/571 (15%)
Query: 18 QSDFEALLQLKKGIAKDPSGQIIDSWDTKSLSSDGCPRNWFGITCTNGYVTSIMLNDMGL 77
QS + + QL P ++ W SS+ P + G+TC + VTSI L+ L
Sbjct: 8 QSLYREIHQLISFKDVLPDKNLLPDW-----SSNKNPCTFDGVTCRDDKVTSIDLSSKPL 62
Query: 78 VGNFSFPTIIGLKMLCNVS----VSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIP--- 130
N F + + +SN+ + G+++ SL LDLS N G +
Sbjct: 63 --NVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLT 120
Query: 131 ------------------------SGIVSLKNLMLLNISSNSFEGTFPSGF---GGLGKL 163
SG + L +L +L++S+NS G G+ G G+L
Sbjct: 121 SLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL 180
Query: 164 KYLDLRANRFGGDI---------------------MHLLSQLGSVVHVDLSNNQXXXXXX 202
K+L + N+ GD+ + L ++ H+D+S N+
Sbjct: 181 KHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK---LSG 237
Query: 203 XXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNNHLVGAIPSF--NFV 260
+ LNIS N VG + P +P +L+ + N G IP F
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPIPP---LP-LKSLQYLSLAENKFTGEIPDFLSGAC 293
Query: 261 FSLRILRLGSNQLSGSLPVAXXXXXXXXXXXXXXXXNQLEGPVGSITSAT-LKKVNLSSN 319
+L L L N G++P E P+ ++ LK ++LS N
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 320 KLSGSLPARVGHCT----IVDLSNNRLSGDL--SRMQNWGNYVEDIHLSSNFLTGMVPNQ 373
+ SG LP + + + +DLS+N SG + + QN N +++++L +N TG +P
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413
Query: 374 TSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNL 433
S L S +S N L G +P+ LG+ +L+ + L LN L G + L L L
Sbjct: 414 LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473
Query: 434 SGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLSNN 493
N+ +G +P +G + +L + L+ N L+G + I + NL L LSNN
Sbjct: 474 DFNDLTGEIP---------SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 494 KFEGSIPDGLPN--GLKEFNVSFNNLSGVVP 522
F G+IP L + L +++ N +G +P
Sbjct: 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 213/493 (43%), Gaps = 75/493 (15%)
Query: 77 LVGNFS--FPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV 134
L G+FS T LK+L ++S+NQ +G I + ++SL++L L+ N F G IP +
Sbjct: 235 LSGDFSRAISTCTELKLL---NISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLS 290
Query: 135 -SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDI-MHLLSQLGSVVHVDL 192
+ L L++S N F G P FG L+ L L +N F G++ M L ++ + +DL
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 193 SNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNNHLVG 252
S N+ L++S N+ G + P+ + L+ NN G
Sbjct: 351 SFNEFSGELPESLTNLSASLLT--LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408
Query: 253 AIP-SFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXXXXXXXNQLEG--PVGSITSA 309
IP + + L L L N LSG++P + N LEG P +
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL--NMLEGEIPQELMYVK 466
Query: 310 TLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRMQNWGNYVEDIHLSSNFLTGM 369
TL+ + L N L+G +P+ + +CT + NW I LS+N LTG
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNL---------------NW------ISLSNNRLTGE 505
Query: 370 VPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFT-STKL 428
+P + L K+SNNS G++PA LG L +DL+ N NG + + F S K+
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565
Query: 429 TDLNLSGNNF------------SGPLPLQEIQ------------NNPSTGSTQ------- 457
++G + G L E Q NP +++
Sbjct: 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625
Query: 458 -----NLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLSNNKFEGSIPD--GLPNGLKEF 510
N S+ LD++YN LSG + I L LNL +N GSIPD G GL
Sbjct: 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685
Query: 511 NVSFNNLSGVVPE 523
++S N L G +P+
Sbjct: 686 DLSSNKLDGRIPQ 698
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 152/356 (42%), Gaps = 78/356 (21%)
Query: 246 SNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXXXXXXXNQLEGP--- 302
SN+H+ G++ F SL L L N LSG + N L+ P
Sbjct: 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 144
Query: 303 ------------------------VGSITS---ATLKKVNLSSNKLSGSLPAR------- 328
VG + S LK + +S NK+SG +
Sbjct: 145 SGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEF 204
Query: 329 --------------VGHCTI---VDLSNNRLSGDLSRMQNWGNYVEDIHLSSNFLTGMVP 371
+G C+ +D+S N+LSGD SR + ++ +++SSN G +P
Sbjct: 205 LDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Query: 372 NQTSQFLRLTSFKVSNNSLEGDLPAVL-GTYPELKVIDLSLNHLNGFLLPSFFTSTKLTD 430
+ L+ S ++ N G++P L G L +DLS NH G + P F + + L
Sbjct: 265 PLPLKSLQYLS--LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322
Query: 431 LNLSGNNFSGPLPLQ-----------EIQNNPSTG----STQNL--SLTSLDLAYNSLSG 473
L LS NNFSG LP+ ++ N +G S NL SL +LDL+ N+ SG
Sbjct: 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382
Query: 474 RLLPGISK--FHNLVYLNLSNNKFEGSIPDGLPNG--LKEFNVSFNNLSGVVPENL 525
+LP + + + L L L NN F G IP L N L ++SFN LSG +P +L
Sbjct: 383 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 17/338 (5%)
Query: 113 QSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANR 172
+L+ L L +N F G IP + + L+ L++S N GT PS G L KL+ L L N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 173 FGGDIMHLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHD 232
G+I L + ++ + L N ++++S N L GE+
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL---NWISLSNNRLTGEIPKWI 510
Query: 233 GMPYFDNLEVFDASNNHLVGAIPS-FNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
G +NL + SNN G IP+ SL L L +N +G++P A
Sbjct: 511 GR--LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 292 XXXXXNQL----EGPVGSITSA--TLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGD 345
+ +G A L+ + S +L+ R+ ++++ G
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN-----RLSTRNPCNITSRVYGGH 623
Query: 346 LSRMQNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELK 405
S + + + +S N L+G +P + L + +N + G +P +G L
Sbjct: 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 406 VIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLP 443
++DLS N L+G + + T LT+++LS NN SGP+P
Sbjct: 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 95 VSVSNNQLMGNI-TDIGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTF 153
+ +S N L G I +IGS+ L L+L HN G IP + L+ L +L++SSN +G
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 154 PSGFGGLGKLKYLDLRANRFGGDI 177
P L L +DL N G I
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPI 720
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 95 VSVSNNQLMGNITD-IGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTF 153
+++ +N + G+I D +G ++ L LDLS N G IP + +L L +++S+N+ G
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 154 P 154
P
Sbjct: 721 P 721
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 151/280 (53%), Gaps = 20/280 (7%)
Query: 739 VIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+IG G +YK L G+ +A+KR ++G +EF E++ L +HP+LVSL G+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-- 103
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSI--DERLRVAVDVARCLNYLHNERA 856
+ +E ++I Y+ +L +L +D LP +S+ ++RL + + AR L+YLH RA
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSD---LPTMSMSWEQRLEICIGAARGLHYLHT-RA 159
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAG-TADQVLNAGALGYRPPEFASTSKP 915
I H ++KS NILL+ + + TD+ + + T G T + G LGY PE+ +
Sbjct: 160 IIHRDVKSINILLDENFVPKI-TDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 916 CPSLKSDVYAFGIILLELLTGKSSGEIVCVDP-GVVDLTDWVRLLALENRSGECFDRLIM 974
KSDVY+FG++L E+L +S+ IV P +V+L +W A+E+ + ++++
Sbjct: 219 TE--KSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEW----AVESHNNGQLEQIVD 270
Query: 975 DGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEEL 1013
+ P L A++C+ +SE RP M V +L
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 150/280 (53%), Gaps = 20/280 (7%)
Query: 739 VIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+IG G +YK L G+ +A+KR ++G +EF E++ L +HP+LVSL G+
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF-- 103
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSI--DERLRVAVDVARCLNYLHNERA 856
+ +E ++I Y+ +L +L +D LP +S+ ++RL + + AR L+YLH RA
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSD---LPTMSMSWEQRLEICIGAARGLHYLHT-RA 159
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAG-TADQVLNAGALGYRPPEFASTSKP 915
I H ++KS NILL+ + + TD+ + + T T + G LGY PE+ +
Sbjct: 160 IIHRDVKSINILLDENFVPKI-TDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRL 218
Query: 916 CPSLKSDVYAFGIILLELLTGKSSGEIVCVDP-GVVDLTDWVRLLALENRSGECFDRLIM 974
KSDVY+FG++L E+L +S+ IV P +V+L +W A+E+ + ++++
Sbjct: 219 TE--KSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEW----AVESHNNGQLEQIVD 270
Query: 975 DGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEEL 1013
+ P L A++C+ +SE RP M V +L
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKK--EFAREVKKLGNIKHPNLVSLQG 795
E IG GT+++A GS +AVK L E ++ EF REV + ++HPN+V G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLR--VAVDVARCLNYLHN 853
P +++ Y++ SL L ++ R+ +DER R +A DVA+ +NYLHN
Sbjct: 102 AVTQPPNLS--IVTEYLSRGSLYRLLHKSGARE----QLDERRRLSMAYDVAKGMNYLHN 155
Query: 854 ERA-IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAST 912
I H NLKS N+L++ + D+ L R+ S + + AG + PE
Sbjct: 156 RNPPIVHRNLKSPNLLVDK-KYTVKVCDFGLSRLKASTFLSSKSA-AGTPEWMAPEVLRD 213
Query: 913 SKPCPS-LKSDVYAFGIILLELLT 935
PS KSDVY+FG+IL EL T
Sbjct: 214 E---PSNEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKK--EFAREVKKLGNIKHPNLVSLQG 795
E IG GT+++A GS +AVK L E ++ EF REV + ++HPN+V G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLR--VAVDVARCLNYLHN 853
P +++ Y++ SL L ++ R+ +DER R +A DVA+ +NYLHN
Sbjct: 102 AVTQPPNLS--IVTEYLSRGSLYRLLHKSGARE----QLDERRRLSMAYDVAKGMNYLHN 155
Query: 854 ERA-IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAST 912
I H +LKS N+L++ + D+ L R+ S + AG + PE
Sbjct: 156 RNPPIVHRDLKSPNLLVDK-KYTVKVCDFGLSRLKASXFLXSKXA-AGTPEWMAPEVLRD 213
Query: 913 SKPCPS-LKSDVYAFGIILLELLT 935
PS KSDVY+FG+IL EL T
Sbjct: 214 E---PSNEKSDVYSFGVILWELAT 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 27/213 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLR----EGIAKGKKEFAREVKKLGNIKHPNLVSL 793
E+IG G +Y+A G +AVK R E I++ + +E K +KHPN+++L
Sbjct: 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 794 QGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN 853
+G KE ++ + L L +++PP D + AV +AR +NYLH+
Sbjct: 72 RGVC--LKEPNLCLVMEFARGGPLNRVLSG---KRIPP---DILVNWAVQIARGMNYLHD 123
Query: 854 ERAIP--HGNLKSTNILLEAPTMNAVL-------TDYSLHRILTSAGTADQVLNAGALGY 904
E +P H +LKS+NIL+ N L TD+ L R ++ AGA +
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAW 180
Query: 905 RPPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE S S SDV+++G++L ELLTG+
Sbjct: 181 MAPEVIRAS--MFSKGSDVWSYGVLLWELLTGE 211
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 19/204 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGI----AKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G G +YK +++ ++ AVK+L + + K++F +E+K + +H NLV L G
Sbjct: 39 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
+ + ++ Y+ SL L D PPLS R ++A A +N+LH
Sbjct: 98 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA---GALGYRPPEFAST 912
I H ++KS NILL+ A ++D+ L R S A V+ + G Y PE A
Sbjct: 154 HI-HRDIKSANILLD-EAFTAKISDFGLAR--ASEKFAQTVMXSRIVGTTAYMAPE-ALR 208
Query: 913 SKPCPSLKSDVYAFGIILLELLTG 936
+ P KSD+Y+FG++LLE++TG
Sbjct: 209 GEITP--KSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGI----AKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G G +YK +++ ++ AVK+L + + K++F +E+K + +H NLV L G
Sbjct: 33 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
+ + ++ Y+ SL L D PPLS R ++A A +N+LH
Sbjct: 92 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENH 147
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN---AGALGYRPPEFAST 912
I H ++KS NILL+ A ++D+ L R S A V+ G Y PE A
Sbjct: 148 HI-HRDIKSANILLD-EAFTAKISDFGLAR--ASEKFAQXVMXXRIVGTTAYMAPE-ALR 202
Query: 913 SKPCPSLKSDVYAFGIILLELLTG 936
+ P KSD+Y+FG++LLE++TG
Sbjct: 203 GEITP--KSDIYSFGVVLLEIITG 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGI----AKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G G +YK +++ ++ AVK+L + + K++F +E+K + +H NLV L G
Sbjct: 39 MGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
+ + ++ Y+ SL L D PPLS R ++A A +N+LH
Sbjct: 98 F--SSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN---AGALGYRPPEFAST 912
I H ++KS NILL+ A ++D+ L R S A V+ G Y PE A
Sbjct: 154 HI-HRDIKSANILLD-EAFTAKISDFGLAR--ASEKFAQTVMXXRIVGTTAYMAPE-ALR 208
Query: 913 SKPCPSLKSDVYAFGIILLELLTG 936
+ P KSD+Y+FG++LLE++TG
Sbjct: 209 GEITP--KSDIYSFGVVLLEIITG 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 726 MFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGN 784
+F +L H EV+G+ C G K T ++G ++ +K L + ++ F +EVK +
Sbjct: 6 IFRPSDLIHG--EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 785 IKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
++HPN++ G + K+ I+ YI +L ++ D + P S +R+ A D+
Sbjct: 64 LEHPNVLKFIGVLY--KDKRLNFITEYIKGGTLRGIIKSMDSQY--PWS--QRVSFAKDI 117
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
A + YLH+ I H +L S N L+ N V+ D+ L R++ T + L +
Sbjct: 118 ASGMAYLHSMNII-HRDLNSHNCLVRE-NKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 905 RPPEFASTSKP---CPSL--------KSDVYAFGIILLELL 934
R + P P + K DV++FGI+L E++
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGI----AKGKKEFAREVKKLGNIKHPNLVSLQGY 796
G G +YK +++ ++ AVK+L + + K++F +E+K +H NLV L G+
Sbjct: 31 GEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
+ ++ Y SL L D PPLS R ++A A +N+LH
Sbjct: 90 --SSDGDDLCLVYVYXPNGSLLDRLSCLDG--TPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA---GALGYRPPEFASTS 913
I H ++KS NILL+ A ++D+ L R S A V + G Y PE A
Sbjct: 146 I-HRDIKSANILLD-EAFTAKISDFGLAR--ASEKFAQXVXXSRIVGTTAYXAPE-ALRG 200
Query: 914 KPCPSLKSDVYAFGIILLELLTG 936
+ P KSD+Y+FG++LLE++TG
Sbjct: 201 EITP--KSDIYSFGVVLLEIITG 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 38 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H NL + NIL+E
Sbjct: 98 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRNLATRNILVEN 150
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 151 EN-RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 207
Query: 930 LLELLT 935
L EL T
Sbjct: 208 LYELFT 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 55 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 115 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 167
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 168 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 224
Query: 930 LLELLT 935
L EL T
Sbjct: 225 LYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 68 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 128 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 180
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 181 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 237
Query: 930 LLELLT 935
L EL T
Sbjct: 238 LYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 37 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 97 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 149
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 150 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 206
Query: 930 LLELLT 935
L EL T
Sbjct: 207 LYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 55 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 115 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 167
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 168 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 224
Query: 930 LLELLT 935
L EL T
Sbjct: 225 LYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 44 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 104 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 156
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 157 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 213
Query: 930 LLELLT 935
L EL T
Sbjct: 214 LYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 35 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 95 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 147
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 148 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 204
Query: 930 LLELLT 935
L EL T
Sbjct: 205 LYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 37 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 97 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 149
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 150 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 206
Query: 930 LLELLT 935
L EL T
Sbjct: 207 LYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 42 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 102 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 154
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 155 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 211
Query: 930 LLELLT 935
L EL T
Sbjct: 212 LYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 43 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 103 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 155
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 156 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 212
Query: 930 LLELLT 935
L EL T
Sbjct: 213 LYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 40 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 100 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 152
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 153 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 209
Query: 930 LLELLT 935
L EL T
Sbjct: 210 LYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 36 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 96 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 148
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 149 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 205
Query: 930 LLELLT 935
L EL T
Sbjct: 206 LYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 41 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 101 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 153
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 154 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 210
Query: 930 LLELLT 935
L EL T
Sbjct: 211 LYELFT 216
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV-- 284
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 340
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H NL + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 341 HRNLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 397
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 437
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L ++ + + + + +A AR ++YLH ++
Sbjct: 77 STKP---QLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLH-AKS 128
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + D+ L + + + Q +G++ + PE
Sbjct: 129 IIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV-- 323
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 379
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H NL + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 380 HRNLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 436
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 476
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 477 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 518
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 37 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 97 YGSLRDYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 149
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 150 EN-RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 206
Query: 930 LLELLT 935
L EL T
Sbjct: 207 LYELFT 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGK-------KEFAREVKKLGNIKHPNLV 791
IG+ G ++K L S++A+K L G ++G+ +EF REV + N+ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L G P ++ ++ L L + K P+ +LR+ +D+A + Y+
Sbjct: 87 KLYGLMHNPPR----MVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYM 138
Query: 852 HNER-AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA-----GALGYR 905
N+ I H +L+S NI L++ NA + + GT+ Q +++ G +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAK-----VADFGTSQQSVHSVSGLLGNFQWM 193
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE + + K+D Y+F +IL +LTG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV-- 281
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 337
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H NL + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 338 HRNLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 394
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 434
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 435 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 476
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGK-------KEFAREVKKLGNIKHPNLV 791
IG+ G ++K L S++A+K L G ++G+ +EF REV + N+ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L G P ++ ++ L L + K P+ +LR+ +D+A + Y+
Sbjct: 87 KLYGLMHNPPR----MVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYM 138
Query: 852 HNER-AIPHGNLKSTNILLEAPTMN----AVLTDYSLHRILTSAGTADQVLNAGALGYRP 906
N+ I H +L+S NI L++ N A + D+SL + S + +L G +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLL--GNFQWMA 194
Query: 907 PEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE + + K+D Y+F +IL +LTG+
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I ++
Sbjct: 40 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ+ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 100 YGSLREYLQKHKER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 152
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 153 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 209
Query: 930 LLELLT 935
L EL T
Sbjct: 210 LYELFT 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G ++AVK+L+ + ++F RE++ L +++H N+V +G + +I Y+
Sbjct: 40 NTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 814 AQSLAVYLQETDPRKLPPLSID--ERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
SL YLQ R ID + L+ + + + YL +R I H +L + NIL+E
Sbjct: 100 YGSLRDYLQAHAER------IDHIKLLQYTSQICKGMEYLGTKRYI-HRDLATRNILVEN 152
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFGII 929
+ D+ L ++L +V G + + PE + SK S+ SDV++FG++
Sbjct: 153 EN-RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK--FSVASDVWSFGVV 209
Query: 930 LLELLT 935
L EL T
Sbjct: 210 LYELFT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGK-------KEFAREVKKLGNIKHPNLV 791
IG+ G ++K L S++A+K L G ++G+ +EF REV + N+ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L G P ++ ++ L L + K P+ +LR+ +D+A + Y+
Sbjct: 87 KLYGLMHNPPR----MVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYM 138
Query: 852 HNER-AIPHGNLKSTNILLEAPTMN----AVLTDYSLHRILTSAGTADQVLNAGALGYRP 906
N+ I H +L+S NI L++ N A + D+ L + S + +L G +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLL--GNFQWMA 194
Query: 907 PEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE + + K+D Y+F +IL +LTG+
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L ++ + + + + +A AR ++YLH ++
Sbjct: 89 STAP---QLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLH-AKS 140
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + D+ L + + Q +G++ + PE
Sbjct: 141 IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L ++ + + + + +A AR ++YLH ++
Sbjct: 89 STKP---QLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLH-AKS 140
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + D+ L + + Q +G++ + PE
Sbjct: 141 IIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 73 STAP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 124
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 125 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 78 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 129
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 130 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 78 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 129
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 130 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 73 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 124
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 125 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 101 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 152
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 153 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 75 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 126
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 127 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 100 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 151
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + + Q +G++ + PE
Sbjct: 152 IIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out
Inhibitor Ap24534
Length = 284
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 79 -TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 134 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 190
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 230
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 79 -TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 134 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 190
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 230
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1) I
Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2) In
The Myristate Site
Length = 293
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 84 -TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 138
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 139 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 195
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 235
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 84 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 138
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 139 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK--FS 195
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 235
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex
With Dp- 987
Length = 277
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 84 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 138
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 139 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 195
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 235
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 91
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 92 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 146
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 147 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 203
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 243
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 244 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 285
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex With
Inno-406
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 84 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 138
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 139 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 195
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 235
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 79 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 134 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 190
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 230
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 82
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 83 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 137
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 138 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 194
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 234
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 235 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 80
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 81 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 135
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 136 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 192
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 232
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 80
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 81 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 135
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 136 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 192
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 232
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 120/296 (40%), Gaps = 54/296 (18%)
Query: 20 DFEALLQLKKGIAKDPSGQIIDSWDTKSLSSDGCPRNWFGITCTNGYVTSIMLNDMGLVG 79
D +ALLQ+KK + +P+ + SW ++D C R W G+ C T +N++ L G
Sbjct: 7 DKQALLQIKKDLG-NPT--TLSSWLP---TTDCCNRTWLGVLCDTDTQT-YRVNNLDLSG 59
Query: 80 -------------------NFSF------------PTIIGLKMLCNVSVSNNQLMGNITD 108
NF + P I L L + +++ + G I D
Sbjct: 60 LNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD 119
Query: 109 -IGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKL-KYL 166
+ I++L LD S+N G +P I SL NL+ + N G P +G KL +
Sbjct: 120 FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179
Query: 167 DLRANRFGGDIMHLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVG 226
+ NR G I + L ++ VDLS N Q +++++NSL
Sbjct: 180 TISRNRLTGKIPPTFANL-NLAFVDLSRNM---LEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 227 ELFPHDGMPYFDNLEVFDASNNHLVGAIP----SFNFVFSLRILRLGSNQLSGSLP 278
+L + NL D NN + G +P F+ SL + N L G +P
Sbjct: 236 DL---GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV---SFNNLCGEIP 285
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 26/197 (13%)
Query: 359 IHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFL 418
++++ ++G +P+ SQ L + S N+L G LP + + P L I N ++G +
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 419 LPSFFTSTKL-TDLNLSGNNFSGPLP---------LQEIQNNPSTGSTQNL-----SLTS 463
S+ + +KL T + +S N +G +P ++ N G L +
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQK 225
Query: 464 LDLAYNSLS---GRLLPGISKFHNLVYLNLSNNKFEGSIPDGLPN--GLKEFNVSFNNLS 518
+ LA NSL+ G++ G+SK NL L+L NN+ G++P GL L NVSFNNL
Sbjct: 226 IHLAKNSLAFDLGKV--GLSK--NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Query: 519 GVVPE--NLRNFPDSAF 533
G +P+ NL+ F SA+
Sbjct: 282 GEIPQGGNLQRFDVSAY 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 382 SFKVSNNSLEG-------DLPAVLGTYPELKVIDLS-LNHLNGFLLPSFFTSTKLTDLNL 433
+++V+N L G +P+ L P L + + +N+L G + P+ T+L L +
Sbjct: 49 TYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYI 108
Query: 434 SGNNFSGPLP--LQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLS 491
+ N SG +P L +I+ +L +LD +YN+LSG L P IS NLV +
Sbjct: 109 THTNVSGAIPDFLSQIK-----------TLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 492 NNKFEGSIPDGLPNGLKEF---NVSFNNLSGVVPENLRNF 528
N+ G+IPD + K F +S N L+G +P N
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 197
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 222 NSLVGELFPHDGMPYFDNLEVFDASNNHLVGAIPSF-NFVFSLRILRLGSNQLSGSLPVA 280
N+LVG + P + L ++ ++ GAIP F + + +L L N LSG+LP +
Sbjct: 87 NNLVGPIPP--AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 281 XXXXXXXXXXXXXXXXNQLEGPV----GSITSATLKKVNLSSNKLSGSLPARVGHCTI-- 334
N++ G + GS S + +S N+L+G +P + +
Sbjct: 145 ISSLPNLVGITFDG--NRISGAIPDSYGSF-SKLFTSMTISRNRLTGKIPPTFANLNLAF 201
Query: 335 VDLSNNRLSGDLSRMQNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDL 394
VDLS N L GD S + + IHL+ N L + + L + NN + G L
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTL 260
Query: 395 PAVLGTYPELKVIDLSLNHLNG 416
P L L +++S N+L G
Sbjct: 261 PQGLTQLKFLHSLNVSFNNLCG 282
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 95 VSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFP 154
+ ++ N L ++ +G ++L LDL +N +G +P G+ LK L LN+S N+ G P
Sbjct: 226 IHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Query: 155 SGFGGLGKLKYLDLRA 170
G G L+ D+ A
Sbjct: 286 QG----GNLQRFDVSA 297
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 76
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 77 -TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 131
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 132 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK--FS 188
Query: 919 LKSDVYAFGIILLELLT 935
+KSDV+AFG++L E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl
Mutant In Complex With The Aurora Kinase Inhibitor Vx-680
Length = 287
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 79
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 80 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 134
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 135 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK--FS 191
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 231
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase
Domain
Length = 287
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 80
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 81 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 135
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 136 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK--FS 192
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 232
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 233 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 73 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 124
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + Q +G++ + PE
Sbjct: 125 IIHRDLKSNNIFLHE-DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 32/279 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 79 -TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 134 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 190
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 230
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTI 1016
ME+P + ++ C S+RP + + T+
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 101 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 152
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + Q +G++ + PE
Sbjct: 153 IIHRDLKSNNIFLHE-DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
+ IG GT+YK + + + + + F EV L +H N++ GY
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P + +++ + SL +L + + + + + +A A+ ++YLH ++
Sbjct: 93 STKP---QLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 144
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKP 915
I H +LKS NI L + + D+ L + + Q +G++ + PE
Sbjct: 145 IIHRDLKSNNIFLHE-DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 916 CP-SLKSDVYAFGIILLELLTGK 937
P S +SDVYAFGI+L EL+TG+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 79 -TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 134 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 190
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 230
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid Leukemi
Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 79 -TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 134 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 190
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 230
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 79
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 80 -TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 134
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 135 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK--FS 191
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 231
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 232 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 76
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 77 -TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 131
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 132 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK--FS 188
Query: 919 LKSDVYAFGIILLELLT 935
+KSDV+AFG++L E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
IG GT+YK + + ++ + + + F EV L +H N++ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-- 101
Query: 800 PKEHEKLVISNYINAQSLAVYL--QETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +++ + SL +L QET + + + +A A+ ++YLH + I
Sbjct: 102 -TKDNLAIVTQWCEGSSLYKHLHVQETK------FQMFQLIDIARQTAQGMDYLHAKNII 154
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTSKPC 916
H ++KS NI L + + D+ L + + + QV G++ + PE
Sbjct: 155 -HRDMKSNNIFLHE-GLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 917 P-SLKSDVYAFGIILLELLTGK 937
P S +SDVY++GI+L EL+TG+
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGE 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 76
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 77 -TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLEKKNFI- 131
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 132 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK--FS 188
Query: 919 LKSDVYAFGIILLELLT 935
+KSDV+AFG++L E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 738 EVIGRSCHGTLYKATLDSGS-----ILAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLV 791
+VIG G +YK L + S +A+K L+ G + ++ +F E +G H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L+G K ++I+ Y+ +L +L+E D S+ + + + +A + YL
Sbjct: 110 RLEGVI--SKYKPMMIITEYMENGALDKFLREKDGE----FSVLQLVGMLRGIAAGMKYL 163
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEF 909
N + H +L + NIL+ + + V +D+ L R+L A + G + R PE
Sbjct: 164 ANMNYV-HRDLAARNILVNSNLVCKV-SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLT 935
S K + SDV++FGI++ E++T
Sbjct: 222 ISYRKFTSA--SDVWSFGIVMWEVMT 245
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y+ S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 83
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I ++ +L YL+E + +++ + + L +A ++ + YL + I
Sbjct: 84 -TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLEKKNFI- 138
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE + +K S
Sbjct: 139 HRDLAARNCLVGENHLVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FS 195
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ LL + R
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLSQVYELLEKDYR-------------- 235
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIVLE 1019
ME+P + ++ C S+RP + + T+ E
Sbjct: 236 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + +GK RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ A V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 188
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 189 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 242
Query: 963 NRS 965
R
Sbjct: 243 TRE 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 51 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGV--CTKQRPIFIITEYMANGCLL 107
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 108 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 161
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + V + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 162 SDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 51 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGV--CTKQRPIFIITEYMANGCLL 107
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 108 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 161
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + V + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 162 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 216
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G+++AVK+L+ +++F RE++ L + +V +G +GP E ++ Y+
Sbjct: 34 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLP 93
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+ L +LQ R L L + + + + YL + R + H +L + NIL+E+
Sbjct: 94 SGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVESEA 148
Query: 874 MNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVYAFGIILL 931
+ + D+ L ++L V G + + PE S S S +SDV++FG++L
Sbjct: 149 -HVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLY 205
Query: 932 ELLT 935
EL T
Sbjct: 206 ELFT 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G+++AVK+L+ +++F RE++ L + +V +G +GP ++ Y+
Sbjct: 50 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 109
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+ L +LQ R L L + + + + YL + R + H +L + NIL+E+
Sbjct: 110 SGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVESEA 164
Query: 874 MNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVYAFGIILL 931
+ + D+ L ++L V G + + PE S S S +SDV++FG++L
Sbjct: 165 -HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLY 221
Query: 932 ELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR---LIMDGHDMEQPPRILSD 988
EL T C D +++R++ E R R L+ +G + PP ++
Sbjct: 222 ELFT-------YC-DKSCSPSAEFLRMMGCE-RDVPALSRLLELLEEGQRLPAPPACPAE 272
Query: 989 MLQVALRCILPA-SERPDMMSVFEELSTI 1016
+ ++ C P+ +RP ++ +L +
Sbjct: 273 VHELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + +GK RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 181
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 182 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 235
Query: 956 VRLLALENRS 965
+++L R
Sbjct: 236 IKVLGTPTRE 245
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + +V N Y+ V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 188
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 189 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 242
Query: 963 NRS 965
R
Sbjct: 243 TRE 245
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + +GK RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 181
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 182 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 235
Query: 956 VRLLALENRS 965
+++L R
Sbjct: 236 IKVLGTPTRE 245
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G G ++ T + + +A+K L+ G + F E + + +KH LV L Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQL---YAV 72
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y+N SL +L++ + R KLP L +D +VA +A +NY+H +
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL-VDMAAQVAAGMAYIERMNYIHRD- 130
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L+S NIL+ + + D+ L R++ + + + PE A +
Sbjct: 131 ------LRSANILV-GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL+T
Sbjct: 184 --TIKSDVWSFGILLTELVT 201
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 35/227 (15%)
Query: 716 GDLHLFDVSLMFTAEELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEF 775
G LH+ D + E+ EV+GR G + KA + + A+K++ +K F
Sbjct: 1 GSLHMID----YKEIEVE----EVVGRGAFGVVCKAKWRAKDV-AIKQIES--ESERKAF 49
Query: 776 AREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSID 835
E+++L + HPN+V L G P ++ Y SL L +P LP +
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLNP----VCLVMEYAEGGSLYNVLHGAEP--LPYYTAA 103
Query: 836 ERLRVAVDVARCLNYLHN--ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTA 893
+ + ++ + YLH+ +A+ H +LK N+LL A + D+ GTA
Sbjct: 104 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF---------GTA 154
Query: 894 DQVL-----NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+ N G+ + PE S S K DV+++GIIL E++T
Sbjct: 155 CDIQTHMTNNKGSAAWMAPEVFEGSN--YSEKCDVFSWGIILWEVIT 199
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,6-Difluorophenyl)-1h-1,
2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 32/279 (11%)
Query: 740 IGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G +G +Y S+ +AVK L+E + +EF +E + IKHPNLV L G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC- 97
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E +++ Y+ +L YL+E + ++ + + L +A ++ + YL + I
Sbjct: 98 -TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL---LYMATQISSAMEYLEKKNFI- 152
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L + N L+ + V D+ L R++T + + PE S + S
Sbjct: 153 HRDLAARNCLVGENHVVKV-ADFGLSRLMTGDTYTAHAGAKFPIKWTAPE--SLAYNTFS 209
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
+KSDV+AFG++L E+ T S PG +DL+ + +D L+ G+
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPY-----PG-IDLS-------------QVYD-LLEKGYR 249
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTI 1016
MEQP + ++ C ++RP + T+
Sbjct: 250 MEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L K +A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 43 GEVCSGRL-KVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV-- 99
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++I+ Y+ SL +L++ D R ++ + + + + + YL + A+ H
Sbjct: 100 TKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLSDMSAV-H 154
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ + R+L A G + R PE + K
Sbjct: 155 RDLAARNILVNSNLVCKV-SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 213
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI++ E+++
Sbjct: 214 A--SDVWSYGIVMWEVMS 229
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 119/247 (48%), Gaps = 31/247 (12%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPN 789
E+++ +VIG G +++A L +A+K+ + + K+ RE++ + +KHPN
Sbjct: 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK----VLQDKRFKNRELQIMRIVKHPN 93
Query: 790 LVSLQGYYW--GPKEHE-------KLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRV 840
+V L+ +++ G K+ E + V A L++T P L L + + L
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL-- 151
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
R L Y+H+ I H ++K N+LL+ P+ L D+ +IL AG + V
Sbjct: 152 -----RSLAYIHS-IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI-AGEPN-VSXIC 203
Query: 901 ALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRL 958
+ YR PE F +T+ + D+++ G ++ EL+ G+ + + G+ L + +++
Sbjct: 204 SRYYRAPELIFGATNY---TTNIDIWSTGCVMAELMQGQP---LFPGESGIDQLVEIIKV 257
Query: 959 LALENRS 965
L +R
Sbjct: 258 LGTPSRE 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 27/205 (13%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
EV+GR G + KA + + A+K++ +K F E+++L + HPN+V L G
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDV-AIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN--ER 855
P ++ Y SL L +P LP + + + ++ + YLH+ +
Sbjct: 71 LNP----VCLVMEYAEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL-----NAGALGYRPPEFA 910
A+ H +LK N+LL A + D+ GTA + N G+ + PE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDF---------GTACDIQTHMTNNKGSAAWMAPEVF 175
Query: 911 STSKPCPSLKSDVYAFGIILLELLT 935
S S K DV+++GIIL E++T
Sbjct: 176 EGSN--YSEKCDVFSWGIILWEVIT 198
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 152
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 210
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 211 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYY 267
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 268 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 321
Query: 963 NR 964
R
Sbjct: 322 TR 323
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G+++AVK+L+ +++F RE++ L + +V +G +GP ++ Y+
Sbjct: 38 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 97
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+ L +LQ R L L + + + + YL + R + H +L + NIL+E+
Sbjct: 98 SGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVESEA 152
Query: 874 MNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVYAFGIILL 931
+ + D+ L ++L V G + + PE S S S +SDV++FG++L
Sbjct: 153 -HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLY 209
Query: 932 ELLT 935
EL T
Sbjct: 210 ELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
++G+++AVK+L+ +++F RE++ L + +V +G +GP ++ Y+
Sbjct: 37 NTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 96
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+ L +LQ R L L + + + + YL + R + H +L + NIL+E+
Sbjct: 97 SGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSRRCV-HRDLAARNILVESEA 151
Query: 874 MNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVYAFGIILL 931
+ + D+ L ++L V G + + PE S S S +SDV++FG++L
Sbjct: 152 -HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLY 208
Query: 932 ELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR---LIMDGHDMEQPPRILSD 988
EL T C D +++R++ E R R L+ +G + PP ++
Sbjct: 209 ELFT-------YC-DKSCSPSAEFLRMMGSE-RDVPALSRLLELLEEGQRLPAPPACPAE 259
Query: 989 MLQVALRCILPA-SERPDMMSVFEELSTI 1016
+ ++ C P+ +RP ++ +L +
Sbjct: 260 VHELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 42 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLL 98
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 99 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 152
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + V + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 153 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 35 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLL 91
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 92 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 145
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + V + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 146 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 36 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLL 92
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 93 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 146
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + V + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 147 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 31 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLL 87
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 88 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 141
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + V + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 196
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 85
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 143
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 144 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 200
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 201 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 254
Query: 963 NR 964
R
Sbjct: 255 TR 256
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 77
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 135
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 136 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 192
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 193 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 246
Query: 963 NRS 965
R
Sbjct: 247 TRE 249
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 107
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 165
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 166 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 215
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 216 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 269
Query: 956 VRLLALENR 964
+++L R
Sbjct: 270 IKVLGTPTR 278
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 107
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 165
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 166 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 222
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 223 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 276
Query: 963 NR 964
R
Sbjct: 277 TR 278
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 56 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 111
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 169
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 170 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYY 226
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 227 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 280
Query: 963 NR 964
R
Sbjct: 281 TR 282
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 101
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 159
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 160 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 209
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 210 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 263
Query: 956 VRLLALENR 964
+++L R
Sbjct: 264 IKVLGTPTR 272
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 109
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 167
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 168 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYY 224
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 225 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 278
Query: 963 NR 964
R
Sbjct: 279 TR 280
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 188
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 189 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 242
Query: 963 NRS 965
R
Sbjct: 243 TRE 245
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 78
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 136
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 137 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 186
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 187 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 240
Query: 956 VRLLALENR 964
+++L R
Sbjct: 241 IKVLGTPTR 249
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 74
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 132
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 133 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 189
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 190 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 243
Query: 963 NRS 965
R
Sbjct: 244 TRE 246
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 92
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 150
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 151 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 207
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 208 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 261
Query: 963 NRS 965
R
Sbjct: 262 TRE 264
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 181
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 182 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 235
Query: 956 VRLLALENRS 965
+++L R
Sbjct: 236 IKVLGTPTRE 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 73
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 132 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 188
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 189 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 242
Query: 963 NRS 965
R
Sbjct: 243 TRE 245
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 22/243 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 81
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 139
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 140 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 196
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 197 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 250
Query: 963 NRS 965
R
Sbjct: 251 TRE 253
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 36/250 (14%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 86
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 144
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----- 899
R L Y+H+ I H ++K N+LL+ T L D+ G+A Q++
Sbjct: 145 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDF---------GSAKQLVRGEPNVS 194
Query: 900 --GALGYRPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
+ YR PE F +T + DV++ G +L ELL G+ I D GV L +
Sbjct: 195 YICSRYYRAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEI 248
Query: 956 VRLLALENRS 965
+++L R
Sbjct: 249 IKVLGTPTRE 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHP 788
+E+S+ +VIG G +Y+A L DSG ++A+K+ + + K+ RE++ + + H
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK----VLQDKRFKNRELQIMRKLDHC 85
Query: 789 NLVSLQGYYWGPKEHEKLVISN----YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDV 844
N+V L+ +++ E + V N Y+ V + ++ P+ I +L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQL 143
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
R L Y+H+ I H ++K N+LL+ T L D+ + L V + Y
Sbjct: 144 FRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYY 200
Query: 905 RPPE--FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALE 962
R PE F +T + DV++ G +L ELL G+ I D GV L + +++L
Sbjct: 201 RAPELIFGATDY---TSSIDVWSAGCVLAELLLGQP---IFPGDSGVDQLVEIIKVLGTP 254
Query: 963 NR 964
R
Sbjct: 255 TR 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGFVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 78
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y+N SL +L+ ET P +D ++A +A +NY+H +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD-- 136
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 137 -----LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF- 189
Query: 917 PSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 190 -TIKSDVWSFGILLTELTT 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 25/203 (12%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 78
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y+N SL +L+ ET P +D ++A +A +NY+H +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD-- 136
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILT-SAGTADQVLNAGA---LGYRPPEFAST 912
L++ NIL+ + + D+ L R++ + TA Q GA + + PE A
Sbjct: 137 -----LRAANILV-GENLVCKVADFGLARLIEDNEWTARQ----GAKFPIKWTAPEAALY 186
Query: 913 SKPCPSLKSDVYAFGIILLELLT 935
+ ++KSDV++FGI+L EL T
Sbjct: 187 GRF--TIKSDVWSFGILLTELTT 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQL---YAV 330
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y++ SL +L+ ET P +D ++A +A +NY+H
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 387
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
+L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 388 ----DLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF- 441
Query: 917 PSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDG 976
++KSDV++FGI+L EL T G + PG+V NR E D+ + G
Sbjct: 442 -TIKSDVWSFGILLTELTT---KGRVPY--PGMV------------NR--EVLDQ-VERG 480
Query: 977 HDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
+ M PP + + +C + P+ FE L +
Sbjct: 481 YRMPCPPECPESLHDLMCQCW---RKEPEERPTFEYLQAFL 518
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 47 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 103
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 104 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 158
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 159 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 217
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 218 A--SDVWSYGIVLWEVMS 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 30 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 86
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 87 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 141
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 142 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 200
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 201 A--SDVWSYGIVLWEVMS 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 74
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 130
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ A + + + PE + +
Sbjct: 131 IHRDLRAANILV-SDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE--AINYGTF 187
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src, In
Complex With Amp-pnp
Length = 452
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y++ SL +L+ ET P +D ++A +A +NY+H
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 304
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
+L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 305 ----DLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF- 358
Query: 917 PSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDG 976
++KSDV++FGI+L EL T G + PG+V NR E D+ + G
Sbjct: 359 -TIKSDVWSFGILLTELTT---KGRVPY--PGMV------------NR--EVLDQ-VERG 397
Query: 977 HDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
+ M PP + + +C + P+ FE L +
Sbjct: 398 YRMPCPPECPESLHDLMCQCW---RKEPEERPTFEYLQAFL 435
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y++ SL +L+ ET P +D ++A +A +NY+H
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 304
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
+L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 305 ----DLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF- 358
Query: 917 PSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDG 976
++KSDV++FGI+L EL T G + PG+V NR E D+ + G
Sbjct: 359 -TIKSDVWSFGILLTELTT---KGRVPY--PGMV------------NR--EVLDQ-VERG 397
Query: 977 HDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
+ M PP + + +C + P+ FE L +
Sbjct: 398 YRMPCPPECPESLHDLMCQCW---RKEPEERPTFEYLQAFL 435
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 734 HAPAEVIGRSCHGTLYKAT-LDSGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKH 787
+ P IG +GT+YKA SG +A+K +R EG+ +++L +H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 788 PNLVSLQGYYWGPKEHEKLVISNYINA--QSLAVYLQETDPRKLPPLSIDERLRVAVDVA 845
PN+V L + ++ ++ Q L YL + P LP +I + +R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR---QFL 122
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
R L++LH I H +LK NIL+ + L D+ L RI + D V+ L YR
Sbjct: 123 RGLDFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALDPVVV--TLWYR 178
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE S + D+++ G I E+ K
Sbjct: 179 APEVLLQSTYATPV--DMWSVGCIFAEMFRRK 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 57 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 113
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ Y+ SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 114 TKSKPVMIVTEYMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 168
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 169 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 227
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 228 A--SDVWSYGIVLWEVMS 243
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + EF E K + N+ H LV L G K+ +I+ Y+ L
Sbjct: 36 VAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLL 92
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+E R + L + DV + YL +++ + H +L + N L+ + V
Sbjct: 93 NYLREMRHR----FQTQQLLEMCKDVCEAMEYLESKQFL-HRDLAARNCLVNDQGVVKV- 146
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R + + + + PPE SK S KSD++AFG+++ E+ +
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKF--SSKSDIWAFGVLMWEIYS 201
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 70
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 126
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H NL++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 127 IHRNLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGTF 183
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 184 TIKSDVWSFGILLTEIVT 201
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant)
In Complex With N6-Benzyl Adp
Length = 452
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQL---YAV 247
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E ++ Y++ SL +L+ ET P +D ++A +A +NY+H
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR--- 304
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
+L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 305 ----DLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF- 358
Query: 917 PSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDG 976
++KSDV++FGI+L EL T G + PG+V NR E D+ + G
Sbjct: 359 -TIKSDVWSFGILLTELTT---KGRVPY--PGMV------------NR--EVLDQ-VERG 397
Query: 977 HDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
+ M PP + + +C + P+ FE L +
Sbjct: 398 YRMPCPPECPESLHDLMCQCW---RKEPEERPTFEYLQAFL 435
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L K +A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 22 GEVCSGRL-KVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV-- 78
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++I+ Y+ SL +L++ D R ++ + + + + + YL + + H
Sbjct: 79 TKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLSDMSYV-H 133
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ + R+L A G + R PE + K
Sbjct: 134 RDLAARNILVNSNLVCKV-SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 192
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI++ E+++
Sbjct: 193 A--SDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L K +A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 28 GEVCSGRL-KVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV-- 84
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++I+ Y+ SL +L++ D R ++ + + + + + YL + + H
Sbjct: 85 TKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLSDMSYV-H 139
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ + R+L A G + R PE + K
Sbjct: 140 RDLAARNILVNSNLVCKV-SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTS 198
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI++ E+++
Sbjct: 199 A--SDVWSYGIVMWEVMS 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ + SL +L++ D + ++ + + + +A + YL + A+ H
Sbjct: 116 TKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYLSDMGAV-H 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G G ++ AT + + +AVK ++ G + + F E + ++H LV L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 246
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLP-PLSIDERLRVAVDVARCLNYLHNERAIP 858
+ +I+ ++ SL +L+ + K P P ID + +A + ++ I
Sbjct: 247 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID----FSAQIAEGMAFIEQRNYI- 300
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRI---LTSAGTADQVLNAGALGYRPPEFASTSKP 915
H +L++ NIL+ A ++ + D+ L R+ TA + +N G+
Sbjct: 301 HRDLRAANILVSA-SLVCKIADFGLARVGAKFPIKWTAPEAINFGSF------------- 346
Query: 916 CPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMD 975
++KSDV++FGI+L+E++T +P V+ R +
Sbjct: 347 --TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--------------------RALER 384
Query: 976 GHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
G+ M +P ++ + +RC RP+ FE + +++
Sbjct: 385 GYRMPRPENCPEELYNIMMRCW---KNRPEERPTFEYIQSVL 423
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 71
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y++ SL +L+ ET P +D ++A +A +NY+H +
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD-- 129
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 130 -----LRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF- 182
Query: 917 PSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 183 -TIKSDVWSFGILLTELTT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 74
Query: 800 PKEHEKLVISNYINAQSLAVYLQ-ETDPRKLPPLSIDERLRVAVDVARC--LNYLHNERA 856
E +++ Y++ SL +L+ ET P +D ++A +A +NY+H +
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD-- 132
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPC 916
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 133 -----LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF- 185
Query: 917 PSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 186 -TIKSDVWSFGILLTELTT 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G G ++ ++ + +AVK L+ G + F E + ++H LV L Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRL--YAVV 77
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRK-LPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+E +I+ Y+ SL +L+ + K L P ID + +A + Y+ + I
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID----FSAQIAEGMAYIERKNYI- 132
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L++ N+L+ M + D+ L R++ + + + PE + + C +
Sbjct: 133 HRDLRAANVLVSESLMCKI-ADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGCFT 189
Query: 919 LKSDVYAFGIILLELLT-------GKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+KSDV++FGI+L E++T G+++ +++ L+ R+ +EN E +D
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTA------LSQGYRMPRVENCPDELYDI 243
Query: 972 LIMDGHD-MEQPPRILSDMLQVALRCILPASE 1002
+ M + E+ P D LQ L A+E
Sbjct: 244 MKMCWKEKAEERPTF--DYLQSVLDDFYTATE 273
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + I+H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKIRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 74
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 130
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 131 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 187
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 82
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 138
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 139 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 195
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 196 TIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 80
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 136
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 137 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 193
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 194 TIKSDVWSFGILLTEIVT 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 75
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 131
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 132 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 188
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 189 TIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 76
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 132
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 133 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 189
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 190 TIKSDVWSFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 74
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 130
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 131 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 187
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 83
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 139
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 140 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE--AINYGTF 196
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 197 TIKSDVWSFGILLTEIVT 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 41/241 (17%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLR-----EGIAKGKKEFARE 778
+L F + E +G +G +YKA G I+A+KR+R EGI RE
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA---IRE 69
Query: 779 VKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSI---- 834
+ L + HPN+VSL + + + +L E D +K+ +
Sbjct: 70 ISLLKELHHPNIVSL------------IDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ 117
Query: 835 DERLRVAV-DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR---ILTSA 890
D ++++ + + R + + H R I H +LK N+L+ + L D+ L R I +
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGA-LKLADFGLARAFGIPVRS 175
Query: 891 GTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVV 950
T + V L YR P+ SK S D+++ G I E++TGK + PGV
Sbjct: 176 YTHEVV----TLWYRAPDVLMGSKKY-STSVDIWSIGCIFAEMITGKP------LFPGVT 224
Query: 951 D 951
D
Sbjct: 225 D 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 121/282 (42%), Gaps = 42/282 (14%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G G ++ AT + + +AVK ++ G + + F E + ++H LV L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 252
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLP-PLSIDERLRVAVDVARCLNYLHNERAIP 858
+ +I+ ++ SL +L+ + K P P ID + +A + ++ I
Sbjct: 253 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID----FSAQIAEGMAFIEQRNYI- 306
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE---FASTSKP 915
H +L++ NIL+ A ++ + D+ L R++ + + + PE F S +
Sbjct: 307 HRDLRAANILVSA-SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT-- 363
Query: 916 CPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMD 975
+KSDV++FGI+L+E++T +P V+ R +
Sbjct: 364 ---IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI--------------------RALER 400
Query: 976 GHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
G+ M +P ++ + +RC RP+ FE + +++
Sbjct: 401 GYRMPRPENCPEELYNIMMRCW---KNRPEERPTFEYIQSVL 439
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/289 (21%), Positives = 123/289 (42%), Gaps = 56/289 (19%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G G ++ AT + + +AVK ++ G + + F E + ++H LV L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 79
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLP-PLSIDERLRVAVDVARCLNYLHNERAIP 858
+ +I+ ++ SL +L+ + K P P ID ++A +A +R
Sbjct: 80 -TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA-----FIEQRNYI 133
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE---FASTSKP 915
H +L++ NIL+ A ++ + D+ L R++ + + + PE F S +
Sbjct: 134 HRDLRAANILVSA-SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT-- 190
Query: 916 CPSLKSDVYAFGIILLELLT-------GKSSGEIVCVDPGVVDLTDWVRLLALENRSGEC 968
+KSDV++FGI+L+E++T G S+ E++
Sbjct: 191 ---IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI------------------------- 222
Query: 969 FDRLIMDGHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
R + G+ M +P ++ + +RC RP+ FE + +++
Sbjct: 223 --RALERGYRMPRPENCPEELYNIMMRC---WKNRPEERPTFEYIQSVL 266
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSILAVKRLREGI-AKGKKEFAREVK- 780
S+ A++L P +GR +G + K + SG I+AVKR+R + ++ +K ++
Sbjct: 1 SMEVKADDLE--PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI 58
Query: 781 KLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRV 840
+ + P V+ G + +E + + ++ Y Q D + P I ++
Sbjct: 59 SMRTVDCPFTVTFYGALF--REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI--LGKI 114
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
AV + + L +LH++ ++ H ++K +N+L+ A + D+ + L D ++AG
Sbjct: 115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKD--IDAG 171
Query: 901 ALGYRPPEFASTS--KPCPSLKSDVYAFGIILLEL 933
Y PE + + S+KSD+++ GI ++EL
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 41/241 (17%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLR-----EGIAKGKKEFARE 778
+L F + E +G +G +YKA G I+A+KR+R EGI RE
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA---IRE 69
Query: 779 VKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSI---- 834
+ L + HPN+VSL + + + +L E D +K+ +
Sbjct: 70 ISLLKELHHPNIVSL------------IDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ 117
Query: 835 DERLRVAV-DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR---ILTSA 890
D ++++ + + R + + H R I H +LK N+L+ + L D+ L R I +
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGA-LKLADFGLARAFGIPVRS 175
Query: 891 GTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVV 950
T + V L YR P+ SK S D+++ G I E++TGK + PGV
Sbjct: 176 YTHEVV----TLWYRAPDVLMGSKKY-STSVDIWSIGCIFAEMITGKP------LFPGVT 224
Query: 951 D 951
D
Sbjct: 225 D 225
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 80
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 136
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 137 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGTF 193
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 194 TIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 84
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 140
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 141 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGTF 197
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 198 TIKSDVWSFGILLTEIVT 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 74
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 130
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 131 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGTF 187
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 188 TIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 69
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 125
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 126 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGTF 182
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 183 TIKSDVWSFGILLTEIVT 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
E +G G ++ + + +AVK L++G + F E + ++H LV L Y
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRL---Y 79
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ +I+ Y+ SL +L+ KL +I++ L +A +A + ++ ER
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQIAEGMAFIE-ERNY 135
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + T++ + D+ L R++ + + + PE + +
Sbjct: 136 IHRDLRAANILV-SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE--AINYGTF 192
Query: 918 SLKSDVYAFGIILLELLT 935
++KSDV++FGI+L E++T
Sbjct: 193 TIKSDVWSFGILLTEIVT 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine
Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 41/294 (13%)
Query: 739 VIGRSCHGTLYKATL--DSGSIL--AVKRLREGIAKGK--KEFAREVKKLGNIKHPNLVS 792
++G+ G++ +A L + GS + AVK L+ I +EF RE + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 793 LQGYYWGPKEHEKL----VISNYINAQSLAVYLQET----DPRKLPPLSIDERLRVAVDV 844
L G + +L VI ++ L +L + +P LP ++ +R VD+
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL---VRFMVDI 146
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
A + YL + R H +L + N +L A M + D+ L R + S Q A L
Sbjct: 147 ACGMEYL-SSRNFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGC-ASKLPV 203
Query: 905 RPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + ++ SDV+AFG+ + E++T + +EN
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP-----------------YAGIEN- 245
Query: 965 SGECFDRLIMDGHDMEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIV 1017
E ++ LI G+ ++QPP + ++ + +C +RP + EL I+
Sbjct: 246 -AEIYNYLI-GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 759 LAVKRLREGIAKGKK---EFAREVKKLGNIKHPNLVSL--QGYYWGPKEHEKLVISNYIN 813
+AVK LR +A+ F RE + + HP +V++ G P ++ Y++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+L + P ++ + V D + LN+ H + I H ++K NIL+ A
Sbjct: 100 GVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANILISA-- 151
Query: 874 MNAV-LTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
NAV + D+ + R + +G + A G Y PE A +SDVY+ G +L
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV--DARSDVYSLGCVL 209
Query: 931 LELLTGK 937
E+LTG+
Sbjct: 210 YEVLTGE 216
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 70
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 128
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 129 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 182 --TIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 72
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 130
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 131 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 184 --TIKSDVWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQL---YAV 248
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARCLNYLHNERAI 857
E +++ Y++ SL +L+ + +LP L + +A +A + Y+ +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERMNYV 303
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 304 -HRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRF-- 359
Query: 918 SLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGH 977
++KSDV++FGI+L EL T G + PG+V NR E D+ + G+
Sbjct: 360 TIKSDVWSFGILLTELTT---KGRVPY--PGMV------------NR--EVLDQ-VERGY 399
Query: 978 DMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIV 1017
M PP + + +C + P+ FE L +
Sbjct: 400 RMPCPPECPESLHDLMCQCW---RKDPEERPTFEYLQAFL 436
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 39/234 (16%)
Query: 773 KEFAREVKKLGNIKHPNLVSLQGYYWGPKEH---EKLVISNYINAQSLAVYLQ----ETD 825
+EF E + + HPN++ L G + +VI ++ L YL ET
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 826 PRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR 885
P+ +P ++ L+ VD+A + YL N R H +L + N +L M + D+ L +
Sbjct: 141 PKHIPLQTL---LKFMVDIALGMEYLSN-RNFLHRDLAARNCMLRD-DMTVCVADFGLSK 195
Query: 886 ILTSAGTADQVLNAGALGYRPPEF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEI 942
+ S Q G + P ++ S + + KSDV+AFG+ + E+ T +
Sbjct: 196 KIYSGDYYRQ----GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY- 250
Query: 943 VCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC 996
PGV ++ E +D L + GH ++QP L ++ ++ C
Sbjct: 251 ----PGV--------------QNHEMYDYL-LHGHRLKQPEDCLDELYEIMYSC 285
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 30 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 86
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ + SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 87 TKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 141
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 142 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 200
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 201 A--SDVWSYGIVLWEVMS 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 734 HAPAEVIGRSCHGTLYKAT-LDSGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKH 787
+ P IG +GT+YKA SG +A+K +R EG+ +++L +H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 788 PNLVSLQGYYWGPKEHEKLVISNYINA--QSLAVYLQETDPRKLPPLSIDERLRVAVDVA 845
PN+V L + ++ ++ Q L YL + P LP +I + +R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR---QFL 122
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
R L++LH I H +LK NIL+ + L D+ L RI + V+ L YR
Sbjct: 123 RGLDFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALAPVVV--TLWYR 178
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE S + D+++ G I E+ K
Sbjct: 179 APEVLLQSTYATPV--DMWSVGCIFAEMFRRK 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 759 LAVKRLREGIAKGKK---EFAREVKKLGNIKHPNLVSL--QGYYWGPKEHEKLVISNYIN 813
+AVK LR +A+ F RE + + HP +V++ G P ++ Y++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+L + P ++ + V D + LN+ H + I H ++K NI++ A
Sbjct: 117 GVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISA-- 168
Query: 874 MNAV-LTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
NAV + D+ + R + +G + A G Y PE A +SDVY+ G +L
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV--DARSDVYSLGCVL 226
Query: 931 LELLTGK 937
E+LTG+
Sbjct: 227 YEVLTGE 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L + S+ A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 59 GEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++++ + SL +L++ D + ++ + + + +A + YL ++ H
Sbjct: 116 TKSKPVMIVTEXMENGSLDSFLRKHDAQ----FTVIQLVGMLRGIASGMKYL-SDMGYVH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R+L A G + R PE + K
Sbjct: 171 RDLAARNILINSNLVCKV-SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI+L E+++
Sbjct: 230 A--SDVWSYGIVLWEVMS 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 740 IGRSCHGTLYKAT------LDSGSILAVKRLRE-GIAKGKKEFAREVKKLGNIKHPNLVS 792
IG G +++A + +++AVK L+E A + +F RE + +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKL-------------------PPLS 833
L G K ++ Y+ L +L+ P + PPLS
Sbjct: 115 LLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 834 IDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTA 893
E+L +A VA + YL +ER H +L + N L+ M + D+ L R + SA
Sbjct: 173 CAEQLCIARQVAAGMAYL-SERKFVHRDLATRNCLV-GENMVVKIADFGLSRNIYSADYY 230
Query: 894 DQVLN-AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
N A + + PPE ++ + +SDV+A+G++L E+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRY--TTESDVWAYGVVLWEIFS 271
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 736 PAEVIGRSCHGTLYKAT-LDSGSILAVKRLREGI-AKGKKEFAREVK-KLGNIKHPNLVS 792
P +GR +G + K + SG I+AVKR+R + ++ +K ++ + + P V+
Sbjct: 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVT 114
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
G + +E + + ++ Y Q D + P I ++AV + + L +LH
Sbjct: 115 FYGALF--REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI--LGKIAVSIVKALEHLH 170
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAST 912
++ ++ H ++K +N+L+ A + D+ + L + + ++AG Y PE +
Sbjct: 171 SKLSVIHRDVKPSNVLINA-LGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINP 227
Query: 913 S--KPCPSLKSDVYAFGIILLEL 933
+ S+KSD+++ GI ++EL
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 734 HAPAEVIGRSCHGTLYKAT-LDSGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKH 787
+ P IG +GT+YKA SG +A+K +R EG+ +++L +H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 788 PNLVSLQGYYWGPKEHEKLVISNYINA--QSLAVYLQETDPRKLPPLSIDERLRVAVDVA 845
PN+V L + ++ ++ Q L YL + P LP +I + +R
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR---QFL 122
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
R L++LH I H +LK NIL+ + L D+ L RI + V+ L YR
Sbjct: 123 RGLDFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALFPVVV--TLWYR 178
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PE S + D+++ G I E+ K
Sbjct: 179 APEVLLQSTYATPV--DMWSVGCIFAEMFRRK 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G G ++ ++ + +AVK L+ G + F E + ++H LV L Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRL--YAVV 76
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRK-LPPLSIDERLRVAVDVARCLNYLHNERAIP 858
KE +I+ ++ SL +L+ + K L P ID + +A + Y+ + I
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID----FSAQIAEGMAYIERKNYI- 131
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H +L++ N+L+ M + D+ L R++ + + + PE + + C +
Sbjct: 132 HRDLRAANVLVSESLMCKI-ADFGLARVIEDNEYTAREGAKFPIKWTAPE--AINFGCFT 188
Query: 919 LKSDVYAFGIILLELLT-------GKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+KS+V++FGI+L E++T G+++ +++ L+ R+ +EN E +D
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSA------LSQGYRMPRMENCPDELYDI 242
Query: 972 LIMDGHD-MEQPPRILSDMLQVALRCILPASE 1002
+ M + E+ P D LQ L A+E
Sbjct: 243 MKMCWKEKAEERPTF--DYLQSVLDDFYTATE 272
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 769 AKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL-VISNYINAQSLAVYLQETDPR 827
+K ++E REV L N+KHPN+V + + +E+ L ++ +Y L + + +
Sbjct: 64 SKEREESRREVAVLANMKHPNIVQYRESF---EENGSLYIVMDYCEGGDL---FKRINAQ 117
Query: 828 KLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRIL 887
K D+ L V + L ++H+ R I H ++KS NI L L D+ + R+L
Sbjct: 118 KGVLFQEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFL-TKDGTVQLGDFGIARVL 175
Query: 888 TSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
S + G Y PE +KP + KSD++A G +L EL T K + E
Sbjct: 176 NSTVELARAC-IGTPYYLSPEICE-NKPYNN-KSDIWALGCVLYELCTLKHAFE 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 759 LAVKRLREGIAKGKK---EFAREVKKLGNIKHPNLVSL--QGYYWGPKEHEKLVISNYIN 813
+AVK LR +A+ F RE + + HP +V++ G P ++ Y++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+L + P ++ + V D + LN+ H + I H ++K NI++ A
Sbjct: 100 GVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISA-- 151
Query: 874 MNAV-LTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
NAV + D+ + R + +G + A G Y PE A +SDVY+ G +L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV--DARSDVYSLGCVL 209
Query: 931 LELLTGK 937
E+LTG+
Sbjct: 210 YEVLTGE 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C+G L + +A+K L+ G + +++F E +G HPN++ L+G
Sbjct: 63 GEVCYGRL-RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-- 119
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
+ ++++ Y+ SL +L+ D + +I + + + V + YL ++ H
Sbjct: 120 TRGRLAMIVTEYMENGSLDTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYL-SDLGYVH 174
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSL 919
+L + N+L+++ + V +D+ L R+L A G + R + + S
Sbjct: 175 RDLAARNVLVDSNLVCKV-SDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 920 KSDVYAFGIILLELL 934
SDV++FG+++ E+L
Sbjct: 234 ASDVWSFGVVMWEVL 248
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 759 LAVKRLREGIAKGKK---EFAREVKKLGNIKHPNLVSL--QGYYWGPKEHEKLVISNYIN 813
+AVK LR +A+ F RE + + HP +V++ G P ++ Y++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+L + P ++ + V D + LN+ H + I H ++K NI++ A
Sbjct: 100 GVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISA-- 151
Query: 874 MNAV-LTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
NAV + D+ + R + +G + A G Y PE A +SDVY+ G +L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV--DARSDVYSLGCVL 209
Query: 931 LELLTGK 937
E+LTG+
Sbjct: 210 YEVLTGE 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 787 HPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRV-AVDVA 845
HP LV L + E + Y+N L ++Q RKLP +E R + +++
Sbjct: 112 HPFLVGLHSCF--QTESRLFFVIEYVNGGDLMFHMQRQ--RKLP----EEHARFYSAEIS 163
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
LNYLH ER I + +LK N+LL++ + LTDY + + G G Y
Sbjct: 164 LALNYLH-ERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSTF-CGTPNYI 220
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIV 943
PE S+ D +A G+++ E++ G+S +IV
Sbjct: 221 APEILRGEDYGFSV--DWWALGVLMFEMMAGRSPFDIV 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E ++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 759 LAVKRLREGIAKGKK---EFAREVKKLGNIKHPNLVSL--QGYYWGPKEHEKLVISNYIN 813
+AVK LR +A+ F RE + + HP +V++ G P ++ Y++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+L + P ++ + V D + LN+ H + I H ++K NI++ A
Sbjct: 100 GVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISA-- 151
Query: 874 MNAV-LTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
NAV + D+ + R + +G + A G Y PE A +SDVY+ G +L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV--DARSDVYSLGCVL 209
Query: 931 LELLTGK 937
E+LTG+
Sbjct: 210 YEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 759 LAVKRLREGIAKGKK---EFAREVKKLGNIKHPNLVSL--QGYYWGPKEHEKLVISNYIN 813
+AVK LR +A+ F RE + + HP +V++ G P ++ Y++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 814 AQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+L + P ++ + V D + LN+ H + I H ++K NI++ A
Sbjct: 100 GVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFSH-QNGIIHRDVKPANIMISA-- 151
Query: 874 MNAV-LTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
NAV + D+ + R + +G + A G Y PE A +SDVY+ G +L
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV--DARSDVYSLGCVL 209
Query: 931 LELLTGK 937
E+LTG+
Sbjct: 210 YEVLTGE 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E ++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 787 HPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRV-AVDVA 845
HP LV L + E + Y+N L ++Q RKLP +E R + +++
Sbjct: 69 HPFLVGLHSCF--QTESRLFFVIEYVNGGDLMFHMQRQ--RKLP----EEHARFYSAEIS 120
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
LNYLH ER I + +LK N+LL++ + LTDY + + G G Y
Sbjct: 121 LALNYLH-ERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXF-CGTPNYI 177
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIV 943
PE S+ D +A G+++ E++ G+S +IV
Sbjct: 178 APEILRGEDYGFSV--DWWALGVLMFEMMAGRSPFDIV 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 787 HPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRV-AVDVA 845
HP LV L + E + Y+N L ++Q RKLP +E R + +++
Sbjct: 80 HPFLVGLHSCF--QTESRLFFVIEYVNGGDLMFHMQRQ--RKLP----EEHARFYSAEIS 131
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
LNYLH ER I + +LK N+LL++ + LTDY + + G G Y
Sbjct: 132 LALNYLH-ERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXF-CGTPNYI 188
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIV 943
PE S+ D +A G+++ E++ G+S +IV
Sbjct: 189 APEILRGEDYGFSV--DWWALGVLMFEMMAGRSPFDIV 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L + NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LAAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 787 HPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRV-AVDVA 845
HP LV L + E + Y+N L ++Q RKLP +E R + +++
Sbjct: 65 HPFLVGLHSCF--QTESRLFFVIEYVNGGDLMFHMQRQ--RKLP----EEHARFYSAEIS 116
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
LNYLH ER I + +LK N+LL++ + LTDY + + G G Y
Sbjct: 117 LALNYLH-ERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXF-CGTPNYI 173
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIV 943
PE S+ D +A G+++ E++ G+S +IV
Sbjct: 174 APEILRGEDYGFSV--DWWALGVLMFEMMAGRSPFDIV 209
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C+G L + +A+K L+ G + +++F E +G HPN++ L+G
Sbjct: 63 GEVCYGRL-RVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-- 119
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
+ ++++ Y+ SL +L+ D + +I + + + V + YL ++ H
Sbjct: 120 TRGRLAMIVTEYMENGSLDTFLRTHDGQ----FTIMQLVGMLRGVGAGMRYL-SDLGYVH 174
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSL 919
+L + N+L+++ + V +D+ L R+L A G + R + + S
Sbjct: 175 RDLAARNVLVDSNLVCKV-SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSS 233
Query: 920 KSDVYAFGIILLELL 934
SDV++FG+++ E+L
Sbjct: 234 ASDVWSFGVVMWEVL 248
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L K +A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 47 GEVCSGHL-KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV-- 103
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++I+ ++ SL +L++ D + ++ + + + +A + YL + + H
Sbjct: 104 TKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLADMNYV-H 158
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSL 919
+L + NIL+ + + V +D+ L R L T+D + ALG + P + +
Sbjct: 159 RDLAARNILVNSNLVCKV-SDFGLSRFLED-DTSDPTYTS-ALGGKIPIRWTAPEAIQYR 215
Query: 920 K----SDVYAFGIILLELLT 935
K SDV+++GI++ E+++
Sbjct: 216 KFTSASDVWSYGIVMWEVMS 235
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E ++ Y++ SL +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase In
Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 38/288 (13%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 95 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 149
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEF 909
+++ + H +L + N +L+ + D+ L R + GA + + E
Sbjct: 150 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECF 969
T K + KSDV++FG++L EL+T G D D+T +
Sbjct: 208 LQTQKF--TTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY-------------- 248
Query: 970 DRLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 249 ---LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase In
Complex With Arq 197
Length = 318
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 114 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 168
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA-LGYRPPEFAS 911
+++ + H +L + N +L+ + D+ L R + GA L + S
Sbjct: 169 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+ KSDV++FG++L EL+T G D D+T +
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY---------------- 267
Query: 972 LIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 268 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K L+ G K +++F E +G HPN++ L+G K ++++ Y+ SL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVV--TKSKPVMIVTEYMENGSL 110
Query: 818 AVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV 877
+L++ D + ++ + + + ++ + YL + + H +L + NIL+ + + V
Sbjct: 111 DTFLKKNDGQ----FTVIQLVGMLRGISAGMKYLSDMGYV-HRDLAARNILINSNLVCKV 165
Query: 878 LTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ L R+L A G + R PE + K + SDV+++GI++ E+++
Sbjct: 166 -SDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA--SDVWSYGIVMWEVVS 222
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+AVK ++EG + + EF +E + + + HP LV G KE+ +++ YI+ L
Sbjct: 35 VAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVC--SKEYPIYIVTEYISNGCLL 91
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ + + L P + L + DV + +L + + I H +L + N L++ + +
Sbjct: 92 NYLR-SHGKGLEP---SQLLEMCYDVCEGMAFLESHQFI-HRDLAARNCLVDR-DLCVKV 145
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+D+ + R + V + + PE K S KSDV+AFGI++ E+ +
Sbjct: 146 SDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY--SSKSDVWAFGILMWEVFS 200
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E +++ Y++ L +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 38/288 (13%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 88 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEF 909
+++ + H +L + N +L+ + D+ L R + GA + + E
Sbjct: 143 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECF 969
T K + KSDV++FG++L EL+T G D D+T +
Sbjct: 201 LQTQKF--TTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY-------------- 241
Query: 970 DRLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 242 ---LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 115 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 169
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA-LGYRPPEFAS 911
+++ + H +L + N +L+ + D+ L R + GA L + S
Sbjct: 170 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+ KSDV++FG++L EL+T G D D+T +
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY---------------- 268
Query: 972 LIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 269 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1
Length = 302
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 94 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 148
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA-LGYRPPEFAS 911
+++ + H +L + N +L+ + D+ L R + GA L + S
Sbjct: 149 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+ KSDV++FG++L EL+T G D D+T +
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY---------------- 247
Query: 972 LIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 248 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 150
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA-LGYRPPEFAS 911
+++ + H +L + N +L+ + D+ L R + GA L + S
Sbjct: 151 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+ KSDV++FG++L EL+T G D D+T +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY---------------- 249
Query: 972 LIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 250 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor
13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 95 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 149
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA-LGYRPPEFAS 911
+++ + H +L + N +L+ + D+ L R + GA L + S
Sbjct: 150 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+ KSDV++FG++L EL+T G D D+T +
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY---------------- 248
Query: 972 LIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 249 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLREG---IAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + A + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRAALCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 180 GRM--HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKAT-LDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTXLCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of
C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain Of
C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With 4-(
(6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 38/288 (13%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 93 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 147
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEF 909
+++ + H +L + N +L+ + D+ L R + GA + + E
Sbjct: 148 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECF 969
T K + KSDV++FG++L EL+T G D D+T +
Sbjct: 206 LQTQKF--TTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY-------------- 246
Query: 970 DRLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 247 ---LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 129 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRAALCGTLDYLPPEMIE 182
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 183 GR--MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 130 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 183
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 184 GR--MHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 129 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 182
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 183 GR--MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 75 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 125 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 178
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 179 GR--MHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 129 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 182
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 183 GR--MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 34/286 (11%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 91 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 145
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA-LGYRPPEFAS 911
+++ + H +L + N +L+ + D+ L R + GA L + S
Sbjct: 146 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDR 971
+ KSDV++FG++L EL+T G D D+T +
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY---------------- 244
Query: 972 LIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 245 -LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 38/288 (13%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + YL
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKYLA 150
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEF 909
+++ + H +L + N +L+ + D+ L R + GA + + E
Sbjct: 151 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECF 969
T K + KSDV++FG++L EL+T G D D+T +
Sbjct: 209 LQTQKF--TTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY-------------- 249
Query: 970 DRLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 250 ---LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 131 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 184
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 185 GR--MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLREG---IAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + A + + REV+ +++HPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 131 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEXIE 184
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 185 GRX--HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 129 SKRVI-HRDIKPENLLLGSAGELKIANFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 182
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 183 GR--MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRXXLCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 78 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 128 SKRVI-HRDIKPENLLLGSAGELKIANFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 181
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 182 GR--MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 796 YYWGPKEHEKLVISNYINAQSL-AVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYL 851
Y+ H+ + + L VY R+L LS + R A ++A L+Y
Sbjct: 102 YF-----HDATRVYLILEYAPLGTVY------RELQKLSKFDEQRTATYITELANALSYC 150
Query: 852 HNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFA 910
H++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 151 HSKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMI 204
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 205 EGR--MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 129 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRXXLCGTLDYLPPEMIE 182
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 183 GR--MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 796 YYWGPKEHEKLVISNYINAQSL-AVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYL 851
Y+ H+ + + L VY R+L LS + R A ++A L+Y
Sbjct: 93 YF-----HDATRVYLILEYAPLGTVY------RELQKLSKFDEQRTATYITELANALSYC 141
Query: 852 HNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFA 910
H++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 142 HSKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMI 195
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 196 EGR--MHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 101 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 155
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 156 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALE 212
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 254
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 255 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 78 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 128 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRXXLCGTLDYLPPEMIE 181
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 182 GR--MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L K +A+K L+ G K +++F E +G HPN++ L+G
Sbjct: 21 GEVCSGHL-KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV-- 77
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
K ++I+ ++ SL +L++ D + ++ + + + +A + YL + + H
Sbjct: 78 TKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLADMNYV-H 132
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSL 919
L + NIL+ + + V +D+ L R L T+D + ALG + P + +
Sbjct: 133 RALAARNILVNSNLVCKV-SDFGLSRFLED-DTSDPTYTS-ALGGKIPIRWTAPEAIQYR 189
Query: 920 K----SDVYAFGIILLELLT 935
K SDV+++GI++ E+++
Sbjct: 190 KFTSASDVWSYGIVMWEVMS 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 77 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S H A ++ + +G L Y PPE
Sbjct: 127 SKRVI-HRDIKPENLLLGSAGELKIADFGWSCH-----APSSRRTTLSGTLDYLPPEMIE 180
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 181 GR--MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 97 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 151
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 152 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMLDK-EFDSVHNKTGAKLPVKWMALE 208
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 250
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 251 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 97 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 151
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 152 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALE 208
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 250
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 251 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 155 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 209
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 210 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALE 266
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 308
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 309 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTELCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 150
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 151 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALE 207
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 249
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 250 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
+G+ C G ++ T + + +A+K L+ G + F +E + + ++H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL---YAV 81
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPR--KLPPLSIDERLRVAVDVARC--LNYLHNER 855
E ++ Y++ L +L+ + +LP L +D ++A +A +NY+H +
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVERMNYVHRD- 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
L++ NIL+ + + D+ L R++ + + + PE A +
Sbjct: 140 ------LRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 916 CPSLKSDVYAFGIILLELLT 935
++KSDV++FGI+L EL T
Sbjct: 193 --TIKSDVWSFGILLTELTT 210
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLREGIAKG--KKEFAREVKKLGNIKHPNLVSLQGY 796
IG +G ++K D+G I+A+K+ E KK RE++ L +KHPNLV+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 797 YWGPKEHEKL-VISNYINAQSLAVYLQETD--PRKLPPLSIDERLRVAVDVARCLNYLHN 853
+ + +L ++ Y + L E D R +P + + + +N+ H
Sbjct: 71 F---RRKRRLHLVFEYCD----HTVLHELDRYQRGVPEHLVKS---ITWQTLQAVNFCHK 120
Query: 854 ERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALG-YRPPE-F 909
I H ++K NIL+ T ++V L D+ R+LT G +D + A YR PE
Sbjct: 121 HNCI-HRDVKPENILI---TKHSVIKLCDFGFARLLT--GPSDYYDDEVATRWYRSPELL 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTG 936
++ P + DV+A G + ELL+G
Sbjct: 175 VGDTQYGPPV--DVWAIGCVFAELLSG 199
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 32 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 91
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 92 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 144
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 145 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 201
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 202 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 243
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 244 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 738 EVIGRSCHGTLYKATLDSGSI---LAVKRLREGIAKG-KKEFAREVK---KLGNIKHPNL 790
+VIG G + KA + + A+KR++E +K ++FA E++ KLG+ HPN+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 85
Query: 791 VSLQGYYWGPKEHEKLVI--SNYINAQSLAVYLQ-----ETDP------RKLPPLSIDER 837
++L G EH + Y +L +L+ ETDP LS +
Sbjct: 86 INLLG----ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L A DVAR ++YL ++ I H NL + NIL+ A + D+ L R +V
Sbjct: 142 LHFAADVARGMDYLSQKQFI-HRNLAARNILV-GENYVAKIADFGLSR-------GQEVY 192
Query: 898 NAGALGYRPPEF---ASTSKPCPSLKSDVYAFGIILLELLT 935
+G P + S + + SDV+++G++L E+++
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI+ + +
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVITEFCKFGN 109
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 168
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 169 NILLSEKNVVKI-CDFGLARDIXK--DPDXVRKGDARLPLKWMAPE--TIFDRVYTIQSD 223
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 224 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 264
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIVLEKDSQGK 1025
+M Q L C S+RP + E L ++ Q +
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 122
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 123 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 179
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 221
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 222 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 81 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 131 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEMIE 184
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 185 GR--MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 33/176 (18%)
Query: 773 KEFAREVKKLGNIKHPNLVSL-------QGYYWGPKEHEKLVISNYINAQSLAVYLQETD 825
K F REV + H N+VS+ YY ++ YI +L+ Y++
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY---------LVMEYIEGPTLSEYIESHG 106
Query: 826 PRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR 885
P LS+D + + + + H+ R I H ++K NIL+++ + D+ + +
Sbjct: 107 P-----LSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIF-DFGIAK 159
Query: 886 IL--TSAGTADQVLNAGALGYRPPEFA--STSKPCPSLKSDVYAFGIILLELLTGK 937
L TS + VL G + Y PE A + C +D+Y+ GI+L E+L G+
Sbjct: 160 ALSETSLTQTNHVL--GTVQYFSPEQAKGEATDEC----TDIYSIGIVLYEMLVGE 209
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGXLLDYVREHKDN----IGSQYL 119
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 120 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 176
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 218
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 219 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 275
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 276 -MARDPQ 281
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 121
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 122 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 178
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 220
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 221 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVS-LQG 795
E IG+ GT+Y A + +G +A++++ K+ E+ + K+PN+V+ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYLHN 853
Y G E V+ Y+ SL + ET +DE AV + + L +LH+
Sbjct: 87 YLVG---DELWVVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHS 135
Query: 854 ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS 913
+ I H N+KS NILL + LTD+ +T + + G + PE +
Sbjct: 136 NQVI-HRNIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRK 192
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
P K D+++ GI+ +E++ G+
Sbjct: 193 AYGP--KVDIWSLGIMAIEMIEGE 214
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With A
Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepat
Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 96 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 150
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 151 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALE 207
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 249
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 250 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 754 DSGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYI 812
++G +AVK L+ E + +E++ L N+ H N+V +G + +I ++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 813 NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
+ SL YL P+ +++ ++L+ AV + + ++YL R H +L + N+L+E+
Sbjct: 96 PSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYL-GSRQYVHRDLAARNVLVES- 149
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ D+ L + + + V + + + PE SK + SDV++FG+ L
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF--YIASDVWSFGVTL 207
Query: 931 LELLT 935
ELLT
Sbjct: 208 HELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 754 DSGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYI 812
++G +AVK L+ E + +E++ L N+ H N+V +G + +I ++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 813 NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
+ SL YL P+ +++ ++L+ AV + + ++YL R H +L + N+L+E+
Sbjct: 108 PSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYL-GSRQYVHRDLAARNVLVES- 161
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ D+ L + + + V + + + PE SK + SDV++FG+ L
Sbjct: 162 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF--YIASDVWSFGVTL 219
Query: 931 LELLT 935
ELLT
Sbjct: 220 HELLT 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 126
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 127 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 183
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 225
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 226 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 282
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 283 -MARDPQ 288
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 1 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 60
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 113
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 114 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 170
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 212
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 213 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 269
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 270 -MARDPQ 275
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With Amp-
Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 119
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 120 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 176
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 218
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 219 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 275
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 276 -MARDPQ 281
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 122
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 123 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 179
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 221
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 222 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 278
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 279 -MARDPQ 284
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 36/287 (12%)
Query: 738 EVIGRSCHGTLYKATL---DSGSI-LAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVS 792
EVIGR G +Y TL D I AVK L G+ +F E + + HPN++S
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L G E LV+ Y+ L +++ ++ + + + VA+ + +L
Sbjct: 94 LLGICLR-SEGSPLVVLPYMKHGDLRNFIRNETHNP----TVKDLIGFGLQVAKGMKFLA 148
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFA 910
+++ + H +L + N +L+ + D+ L R + D V N L +
Sbjct: 149 SKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALE 205
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L EL+T G D D+T +
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTFDITVY--------------- 247
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
++ G + QP + +V L+C P +E RP + +S I
Sbjct: 248 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain With
4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 13 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 72
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 73 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 125
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 126 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 182
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 224
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 225 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
Query: 1017 VLEKDSQ 1023
+D Q
Sbjct: 283 A--RDPQ 287
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 77 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 127 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEMIE 180
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 181 GR--MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A +S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 76 YF-----HDSTRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
+++ I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 126 SKKVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRAALCGTLDYLPPEMIE 179
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 180 GR--MHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAREVKKLGNIKHPNLV 791
+V+G GT+YK + G + A+K L E K EF E + ++ HP+LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L G P +++ + L Y+ E + L V +A+ + YL
Sbjct: 81 RLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQIAKGMMYL 133
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
ER + H +L + N+L+++P + +TD+ L R+L + + G + +
Sbjct: 134 E-ERRLVHRDLAARNVLVKSPN-HVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALEC 190
Query: 912 TSKPCPSLKSDVYAFGIILLELLT--GKSSGEIVCVDPGVVDLTDWVRLLALENRSGECF 969
+ +SDV+++G+ + EL+T GK I ++ D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-----PTREIPD--------------- 230
Query: 970 DRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTIVLEKDSQ 1023
L+ G + QPP D+ V ++C ++ A RP + E S + +D Q
Sbjct: 231 --LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR--MARDPQ 281
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI+ + +
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVITEFCKFGN 109
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 168
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 169 NILLSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSD 223
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 224 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 264
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIVLEKDSQGK 1025
+M Q L C S+RP + E L ++ Q +
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 69/295 (23%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAREVKKLGNIKHPNLV 791
+V+G GT+YK + G + A+K L E K EF E + ++ HP+LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L G P +++ + L Y+ E + L V +A+ + YL
Sbjct: 104 RLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDN----IGSQLLLNWCVQIAKGMMYL 156
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
ER + H +L + N+L+++P + +TD+ L R+L + + G + +
Sbjct: 157 E-ERRLVHRDLAARNVLVKSPN-HVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALEC 213
Query: 912 TSKPCPSLKSDVYAFGIILLELLT--GKSSGEIVCVDPGVVDLTDWVRLLALENRSGECF 969
+ +SDV+++G+ + EL+T GK I ++ D
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-----PTREIPD--------------- 253
Query: 970 DRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTIVLEKDSQ 1023
L+ G + QPP D+ V ++C ++ A RP + E S + +D Q
Sbjct: 254 --LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR--MARDPQ 304
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKATLDSGS-ILAVKRLREG---IAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A ILA+K L + A + + REV+ +++HPN++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 73 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 123 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 176
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 177 GRM--HDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI+ + +
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVITEFCKFGN 109
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 168
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 169 NILLSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSD 223
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 224 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 264
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIVLEKDSQGK 1025
+M Q L C S+RP + E L ++ Q +
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 77 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 127 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRDTLCGTLDYLPPEMIE 180
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 181 GR--MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L I+HPN+++L + + + ++I ++ L +L E
Sbjct: 54 RRGVSR--EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ L+ DE + + ++YLH++R I H +LK NI+L P L D+
Sbjct: 110 E-----SLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 882 SLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ + + + G + PE + +P L++D+++ G+I LL+G S
Sbjct: 164 GIAHKIEAGNEFKNIF--GTPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L I+HPN+++L + + + ++I ++ L +L E
Sbjct: 47 RRGVSR--EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEK 102
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ L+ DE + + ++YLH++R I H +LK NI+L P L D+
Sbjct: 103 E-----SLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDF 156
Query: 882 SLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ + + + G + PE + +P L++D+++ G+I LL+G S
Sbjct: 157 GIAHKIEAGNEFKNIF--GTPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 39/308 (12%)
Query: 723 VSLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFA 776
++L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 3 MALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 62
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDE 836
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQY 115
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQV 896
L V +A +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 116 LLNWCVQIAEGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYH 172
Query: 897 LNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWV 956
G + + S + +SDV+++G+ + EL+T S
Sbjct: 173 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----------------- 215
Query: 957 RLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELST 1015
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 216 ---PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 272
Query: 1016 IVLEKDSQ 1023
+ +D Q
Sbjct: 273 --MARDPQ 278
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLREG---IAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + A + + REV+ +++HPN++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 79 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 853 NERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 129 SKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRDDLCGTLDYLPPEMIE 182
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKSSGE 941
K D+++ G++ E L GK E
Sbjct: 183 GR--MHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 43/284 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 109
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 168
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 169 NILLSEKNVVKI-CDFGLARDIXK--DPDXVRKGDARLPLKWMAPE--TIFDRVYTIQSD 223
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 224 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 264
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIVLEKDSQGK 1025
+M Q L C S+RP + E L ++ Q +
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 122
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 123 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 179
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 221
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 222 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 734 HAPAEVIGRSCHGTLYKAT-LDSGSILAVKRLR-----EGIAKGKKEFAREV---KKLGN 784
+ P IG +GT+YKA SG +A+K +R G REV ++L
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 785 IKHPNLVSLQGYYWGPKEHEKLVISNYINA--QSLAVYLQETDPRKLPPLSIDERLRVAV 842
+HPN+V L + ++ ++ Q L YL + P LP +I + +R
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR--- 127
Query: 843 DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL 902
R L++LH I H +LK NIL+ + L D+ L RI + V+ L
Sbjct: 128 QFLRGLDFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALTPVVV--TL 183
Query: 903 GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
YR PE S + D+++ G I E+ K
Sbjct: 184 WYRAPEVLLQSTYATPV--DMWSVGCIFAEMFRRK 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 121
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 122 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 178
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 220
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 221 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 70
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 123
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 124 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 180
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 222
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 223 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 279
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 280 -MARDPQ 285
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With
Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 34/255 (13%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K +REG A +++F E + + + HP LV L G ++ +++ ++ L+
Sbjct: 35 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGV--CLEQAPICLVTEFMEHGCLS 91
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ R L + + L + +DV + YL E + H +L + N L+ + V
Sbjct: 92 DYLR--TQRGL--FAAETLLGMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKV- 145
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+D+ + R + + + PE S S+ S KSDV++FG+++ E+ S
Sbjct: 146 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY--SSKSDVWSFGVLMWEVF---S 200
Query: 939 SGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL 998
G+I ENRS I G + +P + + Q+ C
Sbjct: 201 EGKI-----------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC-- 241
Query: 999 PASERPDMMSVFEEL 1013
ERP+ F L
Sbjct: 242 -WRERPEDRPAFSRL 255
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 119
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 120 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 176
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 218
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 219 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 275
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 276 -MARDPQ 281
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 796 YYWGPKEHEKLVISNYINAQSL-AVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYL 851
Y+ H+ + + L VY R+L LS + R A ++A L+Y
Sbjct: 102 YF-----HDATRVYLILEYAPLGTVY------RELQKLSKFDEQRTATYITELANALSYC 150
Query: 852 HNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFA 910
H++R I H ++K N+LL A + +S+H A ++ + G L Y PPE
Sbjct: 151 HSKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRDDLCGTLDYLPPEMI 204
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGK 937
K D+++ G++ E L GK
Sbjct: 205 EGR--MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 17 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 76
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 77 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 129
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 130 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 186
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 228
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + +C ++ A RP + E S
Sbjct: 229 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK- 285
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 286 -MARDPQ 291
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole
Inhibitor
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 119
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 120 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 176
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 218
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + +C ++ A RP + E S
Sbjct: 219 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK- 275
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 276 -MARDPQ 281
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 10 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 122
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 123 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 179
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 221
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + +C ++ A RP + E S
Sbjct: 222 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK- 278
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 279 -MARDPQ 284
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 738 EVIGRSCHGTLYKATLDSGSI---LAVKRLREGIAKG-KKEFAREVK---KLGNIKHPNL 790
+VIG G + KA + + A+KR++E +K ++FA E++ KLG+ HPN+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 88
Query: 791 VSLQGYYWGPKEHEKLVI--SNYINAQSLAVYLQ-----ETDP------RKLPPLSIDER 837
++L G EH + Y +L +L+ ETDP LS +
Sbjct: 89 INLLG----ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L A DVAR ++YL ++ I H +L + NIL+ A + D+ L R +V
Sbjct: 145 LHFAADVARGMDYLSQKQFI-HRDLAARNILV-GENYVAKIADFGLSR-------GQEVY 195
Query: 898 NAGALGYRPPEF---ASTSKPCPSLKSDVYAFGIILLELLT 935
+G P + S + + SDV+++G++L E+++
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 727 FTAEELSHAPAEVIGRSCHGTLYKATLD-SGSILAVKRLREGI-AKGKKEFAREVKK-LG 783
FTAE+L IGR +G++ K SG I+AVKR+R + K +K+ ++ +
Sbjct: 19 FTAEDLKDLGE--IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR 76
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINA--QSLAVYLQETDPRKLPPLSIDERL-RV 840
+ P +V G + +E + + ++ Y+ +P +E L ++
Sbjct: 77 SSDCPYIVQFYGALF--REGDCWICMELMSTSFDKFYKYVYSVLDDVIP----EEILGKI 130
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + LN+L I H ++K +NILL+ + N L D+ + L + + +AG
Sbjct: 131 TLATVKALNHLKENLKIIHRDIKPSNILLDR-SGNIKLCDFGISGQLVDSIA--KTRDAG 187
Query: 901 ALGYRPPEF--ASTSKPCPSLKSDVYAFGIILLELLTGK 937
Y PE S S+ ++SDV++ GI L EL TG+
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYL-QETDPR-----KLPPLSIDERLRVA---VDVAR 846
Y+ + VYL E PR +L LS + R A ++A
Sbjct: 81 YF----------------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 847 CLNYLHNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
L+Y H++R I H ++K N+LL A + +S+H A ++ + G L Y
Sbjct: 125 ALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRTTLCGTLDYL 178
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PPE K D+++ G++ E L GK
Sbjct: 179 PPEMIEGR--MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L KA S +A+K L+ G + ++EF E +G +HPN++ L+G
Sbjct: 28 GEVCRGRL-KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVV-- 84
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
++++ ++ +L +L+ D + ++ + + + +A + YL E + H
Sbjct: 85 TNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLA-EMSYVH 139
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRP-----PEFASTSK 914
+L + NIL+ + + V +D+ L R L ++D + G P PE + K
Sbjct: 140 RDLAARNILVNSNLVCKV-SDFGLSRFLEE-NSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 915 PCPSLKSDVYAFGIILLELLT 935
+ SD +++GI++ E+++
Sbjct: 198 FTSA--SDAWSYGIVMWEVMS 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVS-LQG 795
E IG+ GT+Y A + +G +A++++ K+ E+ + K+PN+V+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYLHN 853
Y G E V+ Y+ SL + ET +DE AV + + L +LH+
Sbjct: 86 YLVG---DELWVVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHS 134
Query: 854 ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS 913
+ I H ++KS NILL + LTD+ +T + + G + PE +
Sbjct: 135 NQVI-HRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRK 191
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
P K D+++ GI+ +E++ G+
Sbjct: 192 AYGP--KVDIWSLGIMAIEMIEGE 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 738 EVIGRSCHGTLYKATLDSGSI---LAVKRLREGIAKG-KKEFAREVK---KLGNIKHPNL 790
+VIG G + KA + + A+KR++E +K ++FA E++ KLG+ HPN+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 78
Query: 791 VSLQGYYWGPKEHEKLVI--SNYINAQSLAVYLQ-----ETDP------RKLPPLSIDER 837
++L G EH + Y +L +L+ ETDP LS +
Sbjct: 79 INLLG----ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L A DVAR ++YL ++ I H +L + NIL+ A + D+ L R +V
Sbjct: 135 LHFAADVARGMDYLSQKQFI-HRDLAARNILV-GENYVAKIADFGLSR-------GQEVY 185
Query: 898 NAGALGYRPPEF---ASTSKPCPSLKSDVYAFGIILLELLT 935
+G P + S + + SDV+++G++L E+++
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 43/276 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 177
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 178 NILLSEKNVVKI-CDFGLARDIXK--DPDXVRKGDARLPLKWMAPE--TIFDRVYTIQSD 232
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 233 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 273
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 67
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 120
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 121 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 177
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 219
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 220 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 119
Query: 817 LAVYLQ----ETDPRKLPP------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTN 866
L+ YL+ E P K P L+++ + + VA+ + +L + + I H +L + N
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARN 178
Query: 867 ILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSDV 923
ILL + + D+ L R + D V A L + PE + +++SDV
Sbjct: 179 ILLSEKNVVKI-CDFGLARDIXK--DPDXVRKGDARLPLKWMAPE--TIFDRVYTIQSDV 233
Query: 924 YAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPP 983
++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 234 WSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAPD 274
Query: 984 RILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 275 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 8 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 67
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDN----IGSQYL 120
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 121 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 177
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 219
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 220 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 43/276 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 177
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 178 NILLSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSD 232
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 233 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 273
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 43/276 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 155
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 214
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 215 NILLSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSD 269
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 270 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 310
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 311 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 43/276 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K+ P L+++ + + VA+ + +L + + I H +L +
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 177
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 178 NILLSEKNVVKI-CDFGLARDIYK--DPDXVRKGDARLPLKWMAPE--TIFDRVYTIQSD 232
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 233 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 273
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVS-LQG 795
E IG+ GT+Y A + +G +A++++ K+ E+ + K+PN+V+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYLHN 853
Y G E V+ Y+ SL + ET +DE AV + + L +LH+
Sbjct: 86 YLVG---DELWVVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHS 134
Query: 854 ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS 913
+ I H ++KS NILL + LTD+ +T + + G + PE +
Sbjct: 135 NQVI-HRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRK 191
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
P K D+++ GI+ +E++ G+
Sbjct: 192 AYGP--KVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVS-LQG 795
E IG+ GT+Y A + +G +A++++ K+ E+ + K+PN+V+ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYLHN 853
Y G E V+ Y+ SL + ET +DE AV + + L +LH+
Sbjct: 87 YLVG---DELWVVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHS 135
Query: 854 ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS 913
+ I H ++KS NILL + LTD+ +T + + G + PE +
Sbjct: 136 NQVI-HRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRK 192
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
P K D+++ GI+ +E++ G+
Sbjct: 193 AYGP--KVDIWSLGIMAIEMIEGE 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 34/255 (13%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K +REG A +++F E + + + HP LV L G ++ ++ ++ L+
Sbjct: 34 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGV--CLEQAPICLVFEFMEHGCLS 90
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ R L + + L + +DV + YL E ++ H +L + N L+ + V
Sbjct: 91 DYLR--TQRGL--FAAETLLGMCLDVCEGMAYL-EEASVIHRDLAARNCLVGENQVIKV- 144
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+D+ + R + + + PE S S+ S KSDV++FG+++ E+ S
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY--SSKSDVWSFGVLMWEVF---S 199
Query: 939 SGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL 998
G+I ENRS I G + +P + + Q+ C
Sbjct: 200 EGKI-----------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW- 241
Query: 999 PASERPDMMSVFEEL 1013
ERP+ F L
Sbjct: 242 --KERPEDRPAFSRL 254
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYL-QETDPR-----KLPPLSIDERLRVA---VDVAR 846
Y+ + VYL E PR +L LS + R A ++A
Sbjct: 81 YF----------------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 847 CLNYLHNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
L+Y H++R I H ++K N+LL A + +S+H A ++ + G L Y
Sbjct: 125 ALSYCHSKRVI-HRDIKPENLLLGSAGELKIADFGWSVH-----APSSRRXXLXGTLDYL 178
Query: 906 PPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
PPE K D+++ G++ E L GK
Sbjct: 179 PPEMIEGR--MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole Inhibitor
469
Length = 266
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K +REG A +++F E + + + HP LV L G ++ ++ ++ L+
Sbjct: 34 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGV--CLEQAPICLVFEFMEHGCLS 90
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ R L + + L + +DV + YL E + H +L + N L+ + V
Sbjct: 91 DYLR--TQRGL--FAAETLLGMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKV- 144
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+D+ + R + + + PE S S+ S KSDV++FG+++ E+ S
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY--SSKSDVWSFGVLMWEVF---S 199
Query: 939 SGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL 998
G+I ENRS I G + +P + + Q+ C
Sbjct: 200 EGKI-----------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC-- 240
Query: 999 PASERPDMMSVFEEL 1013
ERP+ F L
Sbjct: 241 -WKERPEDRPAFSRL 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K +REG A +++F E + + + HP LV L G ++ ++ ++ L+
Sbjct: 37 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGV--CLEQAPICLVFEFMEHGCLS 93
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ R L + + L + +DV + YL E + H +L + N L+ + V
Sbjct: 94 DYLR--TQRGL--FAAETLLGMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKV- 147
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+D+ + R + + + PE S S+ S KSDV++FG+++ E+ S
Sbjct: 148 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY--SSKSDVWSFGVLMWEVF---S 202
Query: 939 SGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL 998
G+I ENRS I G + +P + + Q+ C
Sbjct: 203 EGKI-----------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC-- 243
Query: 999 PASERPDMMSVFEEL 1013
ERP+ F L
Sbjct: 244 -WRERPEDRPAFSRL 257
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVS-LQG 795
E IG+ GT+Y A + +G +A++++ K+ E+ + K+PN+V+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYLHN 853
Y G E V+ Y+ SL + ET +DE AV + + L +LH+
Sbjct: 86 YLVG---DELWVVMEYLAGGSLTDVVTET--------CMDEGQIAAVCRECLQALEFLHS 134
Query: 854 ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS 913
+ I H ++KS NILL + LTD+ +T + + G + PE +
Sbjct: 135 NQVI-HRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVTRK 191
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
P K D+++ GI+ +E++ G+
Sbjct: 192 AYGP--KVDIWSLGIMAIEMIEGE 213
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L KA S +A+K L+ G + ++EF E +G +HPN++ L+G
Sbjct: 30 GEVCRGRL-KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVV-- 86
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
++++ ++ +L +L+ D + ++ + + + +A + YL E + H
Sbjct: 87 TNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLA-EMSYVH 141
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRIL---TSAGTADQVLNAG-ALGYRPPEFASTSKP 915
+L + NIL+ + + V +D+ L R L +S T L + + PE + K
Sbjct: 142 RDLAARNILVNSNLVCKV-SDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKF 200
Query: 916 CPSLKSDVYAFGIILLELLT 935
+ SD +++GI++ E+++
Sbjct: 201 TSA--SDAWSYGIVMWEVMS 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 45/297 (15%)
Query: 740 IGRSCHGTLYKA------TLDSGSILAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLV 791
+GR G + +A + +AVK L+EG + + E+K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP-------LSIDERLRVAVDV 844
+L G P +VI + +L+ YL+ +P L+++ + + V
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA--- 901
A+ + +L + + I H +L + NILL + + D+ L R + D V A
Sbjct: 154 AKGMEFLASRKXI-HRDLAARNILLSEKNVVKI-XDFGLARDIYK--DPDYVRKGDARLP 209
Query: 902 LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLAL 961
L + PE + +++SDV++FG++L E+ + +S PGV
Sbjct: 210 LKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGV------------ 250
Query: 962 ENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+ E F R + +G M P +M Q L C S+RP + E L ++
Sbjct: 251 --KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K +REG A +++F E + + + HP LV L G ++ ++ ++ L+
Sbjct: 32 VAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGV--CLEQAPICLVFEFMEHGCLS 88
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ R L + + L + +DV + YL E + H +L + N L+ + V
Sbjct: 89 DYLR--TQRGL--FAAETLLGMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKV- 142
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+D+ + R + + + PE S S+ S KSDV++FG+++ E+ S
Sbjct: 143 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY--SSKSDVWSFGVLMWEVF---S 197
Query: 939 SGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL 998
G+I ENRS I G + +P + + Q+ C
Sbjct: 198 EGKI-----------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC-- 238
Query: 999 PASERPDMMSVFEEL 1013
ERP+ F L
Sbjct: 239 -WKERPEDRPAFSRL 252
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 14 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 126
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ ++L A +
Sbjct: 127 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGRAKLL-GAEEKEYHA 183
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 225
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 226 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 282
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 283 -MARDPQ 288
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 7 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 119
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ ++L A +
Sbjct: 120 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGRAKLL-GAEEKEYHA 176
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 218
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 219 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 275
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 276 -MARDPQ 281
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 740 IGRSCHGTLYKAT-LDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 853 NERAIPHGNLKSTNILLEA-PTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL + + +S+H A ++ + G L Y PPE
Sbjct: 130 SKRVI-HRDIKPENLLLGSNGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEMIE 183
Query: 912 TSKPCPSLKSDVYAFGIILLELLTG 936
K D+++ G++ E L G
Sbjct: 184 GR--MHDEKVDLWSLGVLCYEFLVG 206
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L I+HPN+++L + + + ++I ++ L +L E
Sbjct: 68 RRGVSR--EEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEK 123
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ L+ DE + + ++YLH++R I H +LK NI+L P L D+
Sbjct: 124 E-----SLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDF 177
Query: 882 SLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ + + + G + PE + +P L++D+++ G+I LL+G S
Sbjct: 178 GIAHKIEAGNEFKNIF--GTPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+ GT+YK + G + A+K LRE + K KE
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 126
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 127 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 183
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 225
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 226 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 282
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 283 -MARDPQ 288
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 37/300 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+ GT+YK + G + A+K LRE + K KE
Sbjct: 7 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 119
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 120 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 176
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 218
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 219 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 737 AEVIGRSCHGTLYKATLDS-GSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQ 794
E IGR G ++ L + +++AVK RE + K +F +E + L HPN+V L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 795 GYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE 854
G ++ ++ + +L+ R L + L++ D A + YL ++
Sbjct: 179 GV--CTQKQPIYIVMELVQGGDFLTFLRTEGAR----LRVKTLLQMVGDAAAGMEYLESK 232
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHR-----ILTSAGTADQVLNAGALGYRPPEF 909
I H +L + N L+ + + +D+ + R + ++G QV + + PE
Sbjct: 233 CCI-HRDLAARNCLVTEKNVLKI-SDFGMSREEADGVYAASGGLRQV----PVKWTAPEA 286
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLT 935
+ + S +SDV++FGI+L E +
Sbjct: 287 LNYGR--YSSESDVWSFGILLWETFS 310
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 737 AEVIGRSCHGTLYKATLDS-GSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQ 794
E IGR G ++ L + +++AVK RE + K +F +E + L HPN+V L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 795 GYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE 854
G ++ ++ + +L+ R L + L++ D A + YL ++
Sbjct: 179 GV--CTQKQPIYIVMELVQGGDFLTFLRTEGAR----LRVKTLLQMVGDAAAGMEYLESK 232
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHR-----ILTSAGTADQVLNAGALGYRPPEF 909
I H +L + N L+ + + +D+ + R + ++G QV + + PE
Sbjct: 233 CCI-HRDLAARNCLVTEKNVLKI-SDFGMSREEADGVXAASGGLRQV----PVKWTAPEA 286
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLT 935
+ + S +SDV++FGI+L E +
Sbjct: 287 LNYGR--YSSESDVWSFGILLWETFS 310
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 738 EVIGRSCHGTLYKAT--LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
E+IG G ++KA +D G +KR++ K + REVK L + H N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRID-GKTYVIKRVKYNNEKAE----REVKALAKLDHVNIVHYNG 71
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQE-----------TDPRKLPPLSIDERLRVAVDV 844
+ G + N +++ +++Q + R+ L L + +
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
+ ++Y+H+++ I + +LK +NI L T + D+ L L + G + + G L Y
Sbjct: 132 TKGVDYIHSKKLI-NRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXR--SKGTLRY 187
Query: 905 RPPEFASTSKPCPSLKSDVYAFGIILLELL 934
PE S+ + D+YA G+IL ELL
Sbjct: 188 MSPEQISSQDYGKEV--DLYALGLILAELL 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 43/276 (15%)
Query: 759 LAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+EG + + E+K L +I H N+V+L G P +VI + +
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 120
Query: 817 LAVYLQ----ETDPRKLPP-------LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L+ YL+ E P K P L+++ + + VA+ + +L + + I H +L +
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAAR 179
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSD 922
NILL + + D+ L R + D V A L + PE + +++SD
Sbjct: 180 NILLSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSD 234
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 235 VWSFGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAP 275
Query: 983 PRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 276 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 311
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKATL--DSGSI---LAVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK D ++ +A+K LRE + K KE
Sbjct: 9 ALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD 68
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + + P + L G +++ + L +++E R L +
Sbjct: 69 EAYVMAGVGSPYVSRLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRGR----LGSQDL 121
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L + +A+ ++YL + R + H +L + N+L+++P + +TD+ L R+L T
Sbjct: 122 LNWCMQIAKGMSYLEDVRLV-HRDLAARNVLVKSPN-HVKITDFGLARLLDIDETEYHA- 178
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
+ G + + S + + +SDV+++G+ + EL+T +
Sbjct: 179 DGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAK------------------ 220
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPASE-RPDMMSVFEELSTI 1016
+ L+ G + QPP D+ + ++C + SE RP + E S
Sbjct: 221 --PYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSR- 277
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 278 -MARDPQ 283
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 736 PAEVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLG----NIKHPNL 790
P +GR +G + K + SG I AVKR+R + +E R + L + P
Sbjct: 38 PIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV--NSQEQKRLLXDLDISXRTVDCPFT 95
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V+ G + +E + + + Y Q D + P I + +AV + + L +
Sbjct: 96 VTFYGALF--REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 151
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFA 910
LH++ ++ H ++K +N+L+ A D+ + L D ++AG Y PE
Sbjct: 152 LHSKLSVIHRDVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKD--IDAGCKPYXAPERI 208
Query: 911 ST--SKPCPSLKSDVYAFGIILLEL 933
+ ++ S+KSD+++ GI +EL
Sbjct: 209 NPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNI----KHPNLVSLQ 794
+G G ++K +G ++AVK++R + K+E R + L + P +V
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRR--SGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 795 GYYWGPKEHEKLVISN---YINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLN 849
G + I+N +I + + ++ R P I ER+ ++ V + + L
Sbjct: 91 GTF----------ITNTDVFIAMELMGTCAEKLKKRMQGP--IPERILGKMTVAIVKALY 138
Query: 850 YLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
YL + + H ++K +NILL+ L D+ + L D+ +AG Y PE
Sbjct: 139 YLKEKHGVIHRDVKPSNILLDE-RGQIKLCDFGISGRLVDDKAKDR--SAGCAAYMAPER 195
Query: 910 ---ASTSKPCPSLKSDVYAFGIILLELLTGK 937
+KP +++DV++ GI L+EL TG+
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 161
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 220
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 221 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 277
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 278 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 317
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 318 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 32/294 (10%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 61 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 115
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRM 349
NQ+ P+ ++T+ L ++ LSSN +S + A G ++ LS DL +
Sbjct: 116 LTLFNNQITDIDPLKNLTN--LNRLELSSNTIS-DISALSGLTSLQQLSFGNQVTDLKPL 172
Query: 350 QNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDL 409
N +E + +SSN ++ + + ++ L S +NN + P LG L + L
Sbjct: 173 ANLT-TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 227
Query: 410 SLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYN 469
+ N L + + + T LTDL+L+ N S PL +G T+ LT L L N
Sbjct: 228 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK---LTELKLGAN 274
Query: 470 SLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVP 522
+S L G++ N L L+ N+ E P L + FNN+S + P
Sbjct: 275 QISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNISDISP 325
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 89 LKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV-------------- 134
L L + +S+N+ + +I+ + + +LE L ++N + P GI+
Sbjct: 175 LTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLK 233
Query: 135 ------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSVV 188
SL NL L++++N P GL KL L L AN+ + L+ L ++
Sbjct: 234 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALT 289
Query: 189 HVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNN 248
+++L+ NQ + NIS+ S V L + +F N +V D S
Sbjct: 290 NLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRL-FFANNKVSDVS-- 346
Query: 249 HLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
S + ++ L G NQ+S P+A
Sbjct: 347 -------SLANLTNINWLSAGHNQISDLTPLA 371
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor 1
Length = 317
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ +P L LS + + A VAR + YL +++ I H +L +
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 179
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 180 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 236
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 237 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 276
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 32/294 (10%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 62 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 116
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRM 349
NQ+ P+ ++T+ L ++ LSSN +S + A G ++ LS DL +
Sbjct: 117 LTLFNNQITDIDPLKNLTN--LNRLELSSNTIS-DISALSGLTSLQQLSFGNQVTDLKPL 173
Query: 350 QNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDL 409
N +E + +SSN ++ + + ++ L S +NN + P LG L + L
Sbjct: 174 ANLT-TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228
Query: 410 SLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYN 469
+ N L + + + T LTDL+L+ N S PL +G T+ LT L L N
Sbjct: 229 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK---LTELKLGAN 275
Query: 470 SLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVP 522
+S L G++ N L L+ N+ E P L + FNN+S + P
Sbjct: 276 QISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNISDISP 326
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 35/212 (16%)
Query: 89 LKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV-------------- 134
L L + +S+N+ + +I+ + + +LE L ++N + P GI+
Sbjct: 176 LTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLK 234
Query: 135 ------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSVV 188
SL NL L++++N P GL KL L L AN+ + L+ L ++
Sbjct: 235 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTALT 290
Query: 189 HVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNN 248
+++L+ NQ + NIS+ S V L + +++N +V D S
Sbjct: 291 NLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNN-KVSDVS-- 347
Query: 249 HLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
S + ++ L G NQ+S P+A
Sbjct: 348 -------SLANLTNINWLSAGHNQISDLTPLA 372
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKA-TLDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+ LRE + K KE
Sbjct: 41 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD 100
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 101 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 153
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 154 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTPQ-HVKITDFGLAKLL-GAEEKEYHA 210
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 252
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S +
Sbjct: 253 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
Query: 1017 VLEKDSQ 1023
+D Q
Sbjct: 311 A--RDPQ 315
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 124/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+ GT+YK + G + A+K LRE + K KE
Sbjct: 14 ALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 126
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ L ++L A +
Sbjct: 127 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGLAKLL-GAEEKEYHA 183
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 225
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 226 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 282
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 283 -MARDPQ 288
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 47/299 (15%)
Query: 740 IGRSCHGTLYKA------TLDSGSILAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLV 791
+GR G + +A + +AVK L+EG + + E+K L +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP---------LSIDERLRVAV 842
+L G P +VI + +L+ YL+ +P L+++ + +
Sbjct: 97 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 843 DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA- 901
VA+ + +L + + I H +L + NILL + + D+ L R + D V A
Sbjct: 156 QVAKGMEFLASRKXI-HRDLAARNILLSEKNVVKI-CDFGLARDIXK--DPDXVRKGDAR 211
Query: 902 --LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLL 959
L + PE + +++SDV++FG++L E+ + +S PGV
Sbjct: 212 LPLKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGV---------- 254
Query: 960 ALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+ E F R + +G M P +M Q L C S+RP + E L ++
Sbjct: 255 ----KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 127/298 (42%), Gaps = 53/298 (17%)
Query: 740 IGRSCHGTLYKATLDSG-SILAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVSLQGYY 797
G+ T + +G + +AVK L+E + + ++ E L + HP+++ L G
Sbjct: 36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA- 94
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP---------------------LSIDE 836
++ L+I Y SL +L+E+ RK+ P L++ +
Sbjct: 95 -CSQDGPLLLIVEYAKYGSLRGFLRES--RKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQV 896
+ A +++ + YL E ++ H +L + NIL+ A ++D+ L R + + +
Sbjct: 152 LISFAWQISQGMQYL-AEMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVK- 208
Query: 897 LNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWV 956
+ G + + S + +SDV++FG++L E++T + PG+
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY-----PGI------- 256
Query: 957 RLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELS 1014
E L+ GH ME+P +M ++ L+C + PD VF ++S
Sbjct: 257 --------PPERLFNLLKTGHRMERPDNCSEEMYRLMLQC---WKQEPDKRPVFADIS 303
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 124/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 121
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ ++L A +
Sbjct: 122 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGRAKLL-GAEEKEYHA 178
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 220
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 221 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 277
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 278 -MARDPQ 283
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 124/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 11 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 70
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 123
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ ++L A +
Sbjct: 124 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGRAKLL-GAEEKEYHA 180
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 222
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + ++C ++ A RP + E S
Sbjct: 223 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK- 279
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 280 -MARDPQ 285
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 124/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I+ + L Y++E +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDN----IGSQYL 121
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ ++L A +
Sbjct: 122 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGRAKLL-GAEEKEYHA 178
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 220
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + +C ++ A RP + E S
Sbjct: 221 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK- 277
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 278 -MARDPQ 283
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 45/297 (15%)
Query: 740 IGRSCHGTLYKA------TLDSGSILAVKRLREGIAKGK-KEFAREVKKLGNI-KHPNLV 791
+GR G + +A + +AVK L+EG + + E+K L +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP-------LSIDERLRVAVDV 844
+L G P +VI + +L+ YL+ +P L+++ + + V
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 845 ARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA--- 901
A+ + +L + + I H +L + NILL + + D+ L R + D V A
Sbjct: 154 AKGMEFLASRKXI-HRDLAARNILLSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLP 209
Query: 902 LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLAL 961
L + PE + +++SDV++FG++L E+ + +S PGV
Sbjct: 210 LKWMAPE--TIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-----PGV------------ 250
Query: 962 ENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+ E F R + +G M P +M Q L C S+RP + E L ++
Sbjct: 251 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
+G+ G +Y A S ILA+K L + + K + + REV+ +++HPN++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA---VDVARCLNYLH 852
Y+ H+ + + L T R+L LS + R A ++A L+Y H
Sbjct: 80 YF-----HDATRVYLILEYAPLG-----TVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 853 NERAIPHGNLKSTNILLEA-PTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAS 911
++R I H ++K N+LL + + +S+H A ++ + G L Y PPE
Sbjct: 130 SKRVI-HRDIKPENLLLGSNGELKIADFGWSVH-----APSSRRDTLCGTLDYLPPEMIE 183
Query: 912 TSKPCPSLKSDVYAFGIILLELLTG 936
K D+++ G++ E L G
Sbjct: 184 GR--MHDEKVDLWSLGVLCYEFLVG 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 34/200 (17%)
Query: 754 DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISN-- 810
D+G +A+K+ R+ ++ K ++ + E++ + + HPN+VS + P +KL ++
Sbjct: 37 DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV---PDGLQKLAPNDLP 93
Query: 811 -----YINAQSLAVYLQETD---PRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNL 862
Y L YL + + K P+ + D++ L YLH R I H +L
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-----LLSDISSALRYLHENRII-HRDL 147
Query: 863 KSTNILLEAPTMNAVLTDYSLHRI--LTSAGTADQ----VLNAGALGYRPPEFASTSKPC 916
K NI+L+ + H+I L A DQ G L Y PE K
Sbjct: 148 KPENIVLQPGPQRLI------HKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK-- 199
Query: 917 PSLKSDVYAFGIILLELLTG 936
++ D ++FG + E +TG
Sbjct: 200 YTVTVDYWSFGTLAFECITG 219
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 179
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 180 NVLVTEDNVMKI-ADFGLARDIHHIDXXKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 236
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 237 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 276
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 738 EVIGRSCHGTLYKATL----DSGSILAVKRLREGI----AKGKKEFAREVKKLGNIKH-P 788
+V+G +G ++ D+G + A+K L++ AK + E + L +I+ P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 789 NLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV-DVARC 847
LV+L +Y E + +I +YIN L +L + + + +++ V ++
Sbjct: 120 FLVTL--HYAFQTETKLHLILDYINGGELFTHLSQRER------FTEHEVQIYVGEIVLA 171
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
L +LH + I + ++K NILL++ + VLTD+ L + + T G + Y P
Sbjct: 172 LEHLH-KLGIIYRDIKLENILLDS-NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D ++ G+++ ELLTG S
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 34/200 (17%)
Query: 754 DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISN-- 810
D+G +A+K+ R+ ++ K ++ + E++ + + HPN+VS + P +KL ++
Sbjct: 38 DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV---PDGLQKLAPNDLP 94
Query: 811 -----YINAQSLAVYLQETD---PRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNL 862
Y L YL + + K P+ + D++ L YLH R I H +L
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-----LLSDISSALRYLHENRII-HRDL 148
Query: 863 KSTNILLEAPTMNAVLTDYSLHRI--LTSAGTADQ----VLNAGALGYRPPEFASTSKPC 916
K NI+L+ + H+I L A DQ G L Y PE K
Sbjct: 149 KPENIVLQPGPQRLI------HKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK-- 200
Query: 917 PSLKSDVYAFGIILLELLTG 936
++ D ++FG + E +TG
Sbjct: 201 YTVTVDYWSFGTLAFECITG 220
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 129/305 (42%), Gaps = 54/305 (17%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 57 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 111
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRM 349
NQ+ P+ ++T+ L ++ LSSN TI D+S LSG S
Sbjct: 112 LTLFNNQITDIDPLKNLTN--LNRLELSSN-------------TISDIS--ALSGLTSLQ 154
Query: 350 Q-NWGNYVEDIHLSSNFLT----GMVPNQTS------QFLRLTSFKVSNNSLEGDLPAVL 398
Q N+GN V D+ +N T + N+ S + L S +NN + P L
Sbjct: 155 QLNFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--L 212
Query: 399 GTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQN 458
G L + L+ N L + + + T LTDL+L+ N S PL +G T+
Sbjct: 213 GILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK- 261
Query: 459 LSLTSLDLAYNSLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNL 517
LT L L N +S L G++ N L L+ N+ E P L + FNN+
Sbjct: 262 --LTELKLGANQISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNI 316
Query: 518 SGVVP 522
S + P
Sbjct: 317 SDISP 321
Score = 30.4 bits (67), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 88 GLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV------------- 134
L L + +S+N+ + +I+ + + +LE L ++N + P GI+
Sbjct: 170 NLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQL 228
Query: 135 -------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
SL NL L++++N P GL KL L L AN+ + L+ L ++
Sbjct: 229 KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTAL 284
Query: 188 VHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASN 247
+++L+ NQ + NIS+ S V L + +++N +V D S
Sbjct: 285 TNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNN-KVSDVS- 342
Query: 248 NHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
S + ++ L G NQ+S P+A
Sbjct: 343 --------SLANLTNINWLSAGHNQISDLTPLA 367
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 129/305 (42%), Gaps = 54/305 (17%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 57 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 111
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRM 349
NQ+ P+ ++T+ L ++ LSSN TI D+S LSG S
Sbjct: 112 LTLFNNQITDIDPLKNLTN--LNRLELSSN-------------TISDIS--ALSGLTSLQ 154
Query: 350 Q-NWGNYVEDIHLSSNFLT----GMVPNQTS------QFLRLTSFKVSNNSLEGDLPAVL 398
Q N+GN V D+ +N T + N+ S + L S +NN + P L
Sbjct: 155 QLNFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--L 212
Query: 399 GTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQN 458
G L + L+ N L + + + T LTDL+L+ N S PL +G T+
Sbjct: 213 GILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK- 261
Query: 459 LSLTSLDLAYNSLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNL 517
LT L L N +S L G++ N L L+ N+ E P L + FNN+
Sbjct: 262 --LTELKLGANQISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNI 316
Query: 518 SGVVP 522
S + P
Sbjct: 317 SDISP 321
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 35/213 (16%)
Query: 88 GLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV------------- 134
L L + +S+N+ + +I+ + + +LE L ++N + P GI+
Sbjct: 170 NLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQL 228
Query: 135 -------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
SL NL L++++N P GL KL L L AN+ + L+ L ++
Sbjct: 229 KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN--ISPLAGLTAL 284
Query: 188 VHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASN 247
+++L+ NQ + NIS+ S V L + +F N +V D S
Sbjct: 285 TNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRL-FFSNNKVSDVS- 342
Query: 248 NHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
S + ++ L G NQ+S P+A
Sbjct: 343 --------SLANLTNINWLSAGHNQISDLTPLA 367
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 20/208 (9%)
Query: 737 AEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
E+IG+ G +Y + + + K F REV +H N+V G
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA 856
P +I++ ++L +++ L +++ ++A ++ + + YLH +
Sbjct: 98 CMSPP--HLAIITSLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHA-KG 150
Query: 857 IPHGNLKSTNILLEAPTMNAVLTDYSLHRI--LTSAGTADQVLNA--GALGYRPPEFAST 912
I H +LKS N+ + V+TD+ L I + AG + L G L + PE
Sbjct: 151 ILHKDLKSKNVFYD--NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 913 SKPCP-------SLKSDVYAFGIILLEL 933
P S SDV+A G I EL
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 749 YKATLD-SGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL 806
Y T D +G ++AVK L+EG + + + RE++ L + H ++V +G E
Sbjct: 29 YDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQ 88
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTN 866
++ Y+ SL YL PR L+ + L A + + YLH + I H L + N
Sbjct: 89 LVMEYVPLGSLRDYL----PRHCVGLA--QLLLFAQQICEGMAYLHAQHYI-HRALAARN 141
Query: 867 ILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCP-SLKSDV 923
+LL+ + + D+ L + + +V G + + PE K C SDV
Sbjct: 142 VLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE---CLKECKFYYASDV 197
Query: 924 YAFGIILLELLT 935
++FG+ L ELLT
Sbjct: 198 WSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 749 YKATLD-SGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL 806
Y T D +G ++AVK L+EG + + + RE++ L + H ++V +G E
Sbjct: 30 YDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQ 89
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTN 866
++ Y+ SL YL PR L+ + L A + + YLH + I H L + N
Sbjct: 90 LVMEYVPLGSLRDYL----PRHCVGLA--QLLLFAQQICEGMAYLHAQHYI-HRALAARN 142
Query: 867 ILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCP-SLKSDV 923
+LL+ + + D+ L + + +V G + + PE K C SDV
Sbjct: 143 VLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE---CLKECKFYYASDV 198
Query: 924 YAFGIILLELLT 935
++FG+ L ELLT
Sbjct: 199 WSFGVTLYELLT 210
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVSL-QGYY 797
+G G +YKA S+LA ++ + ++ + +++ E+ L + HPN+V L +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ E+ ++ + ++ + E + PL+ + V LNYLH+ + I
Sbjct: 105 Y---ENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPPE--FAS 911
H +LK+ NIL T++ D L SA + G + PE
Sbjct: 158 -HRDLKAGNILF---TLDG---DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 912 TSKPCP-SLKSDVYAFGIILLEL 933
TSK P K+DV++ GI L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVSL-QGYY 797
+G G +YKA S+LA ++ + ++ + +++ E+ L + HPN+V L +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ E+ ++ + ++ + E + PL+ + V LNYLH+ + I
Sbjct: 105 Y---ENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPPE--FAS 911
H +LK+ NIL T++ D L SA + G + PE
Sbjct: 158 -HRDLKAGNILF---TLDG---DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 912 TSKPCP-SLKSDVYAFGIILLEL 933
TSK P K+DV++ GI L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 126/298 (42%), Gaps = 53/298 (17%)
Query: 740 IGRSCHGTLYKATLDSG-SILAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVSLQGYY 797
G+ T + +G + +AVK L+E + + ++ E L + HP+++ L G
Sbjct: 36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA- 94
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP---------------------LSIDE 836
++ L+I Y SL +L+E+ RK+ P L++ +
Sbjct: 95 -CSQDGPLLLIVEYAKYGSLRGFLRES--RKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQV 896
+ A +++ + YL E + H +L + NIL+ A ++D+ L R + + +
Sbjct: 152 LISFAWQISQGMQYL-AEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVK- 208
Query: 897 LNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWV 956
+ G + + S + +SDV++FG++L E++T + PG+
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY-----PGI------- 256
Query: 957 RLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELS 1014
E L+ GH ME+P +M ++ L+C + PD VF ++S
Sbjct: 257 --------PPERLFNLLKTGHRMERPDNCSEEMYRLMLQC---WKQEPDKRPVFADIS 303
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVSL-QGYY 797
+G G +YKA S+LA ++ + ++ + +++ E+ L + HPN+V L +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
+ E+ ++ + ++ + E + PL+ + V LNYLH+ + I
Sbjct: 105 Y---ENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPPE--FAS 911
H +LK+ NIL T++ D L SA + G + PE
Sbjct: 158 -HRDLKAGNILF---TLDG---DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 912 TSKPCP-SLKSDVYAFGIILLEL 933
TSK P K+DV++ GI L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 741 GRSCHGTLYKATLDSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWG 799
G C G L K +A+K L+ G K +++F E +G HPN+V L+G
Sbjct: 57 GEVCSGRL-KLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVV-- 113
Query: 800 PKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPH 859
+ +++ ++ +L +L++ D + ++ + + + +A + YL + + H
Sbjct: 114 TRGKPVMIVIEFMENGALDAFLRKHDGQ----FTVIQLVGMLRGIAAGMRYLADMGYV-H 168
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR--PPEFASTSKPCP 917
+L + NIL+ + + V +D+ L R++ A G + R PE K
Sbjct: 169 RDLAARNILVNSNLVCKV-SDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTS 227
Query: 918 SLKSDVYAFGIILLELLT 935
+ SDV+++GI++ E+++
Sbjct: 228 A--SDVWSYGIVMWEVMS 243
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase
Domain
Length = 314
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 126/298 (42%), Gaps = 53/298 (17%)
Query: 740 IGRSCHGTLYKATLDSG-SILAVKRLREGIAKGK-KEFAREVKKLGNIKHPNLVSLQGYY 797
G+ T + +G + +AVK L+E + + ++ E L + HP+++ L G
Sbjct: 36 FGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGA- 94
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP---------------------LSIDE 836
++ L+I Y SL +L+E+ RK+ P L++ +
Sbjct: 95 -CSQDGPLLLIVEYAKYGSLRGFLRES--RKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQV 896
+ A +++ + YL E + H +L + NIL+ A ++D+ L R + + +
Sbjct: 152 LISFAWQISQGMQYL-AEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVK- 208
Query: 897 LNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWV 956
+ G + + S + +SDV++FG++L E++T + PG+
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY-----PGI------- 256
Query: 957 RLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELS 1014
E L+ GH ME+P +M ++ L+C + PD VF ++S
Sbjct: 257 --------PPERLFNLLKTGHRMERPDNCSEEMYRLMLQC---WKQEPDKRPVFADIS 303
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 35/296 (11%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 57 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 111
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDL--SNNRLSGDLS 347
NQ+ P+ ++T+ L ++ LSSN +S + A G ++ L S+N+++ DL
Sbjct: 112 LTLFNNQITDIDPLKNLTN--LNRLELSSNTISD-ISALSGLTSLQQLSFSSNQVT-DLK 167
Query: 348 RMQNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVI 407
+ N +E + +SSN ++ + + ++ L S +NN + P LG L +
Sbjct: 168 PLANLT-TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDEL 222
Query: 408 DLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLA 467
L+ N L + + + T LTDL+L+ N S PL +G T+ LT L L
Sbjct: 223 SLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK---LTELKLG 269
Query: 468 YNSLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVP 522
N +S L G++ N L L+ N+ E P L + FNN+S + P
Sbjct: 270 ANQISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNISDISP 322
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 81 FSFPTIIGLKMLCNVS------VSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV 134
FS + LK L N++ +S+N+ + +I+ + + +LE L ++N + P GI+
Sbjct: 158 FSSNQVTDLKPLANLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGIL 216
Query: 135 --------------------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFG 174
SL NL L++++N P GL KL L L AN+
Sbjct: 217 TNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 274
Query: 175 GDIMHLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGM 234
+ L+ L ++ +++L+ NQ + NIS+ S V L +
Sbjct: 275 N--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 332
Query: 235 PYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
+++N +V D S S + ++ L G NQ+S P+A
Sbjct: 333 FFYNN-KVSDVS---------SLANLTNINWLSAGHNQISDLTPLA 368
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDE 836
REV+ + + HPN+V L + E +I Y + + YL ++
Sbjct: 63 REVRIMKILNHPNIVKL--FEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARS 118
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQV 896
+ R + + Y H +R I H +LK+ N+LL+A MN + D+ T G D
Sbjct: 119 KFR---QIVSAVQYCHQKR-IVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDAF 173
Query: 897 LNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
GA Y PE F P + DV++ G+IL L++G
Sbjct: 174 --CGAPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 758 ILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLV--------IS 809
++AVK L++ +K+F RE + L N++H ++V G G + +V ++
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYG-VCGDGDPLIMVFEYMKHGDLN 105
Query: 810 NYINAQSL-AVYLQETDPRKLP-PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
++ A A+ L + PR+ L + + L +A +A + YL ++ + H +L + N
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFV-HRDLATRNC 164
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG----ALGYRPPEFASTSKPCPSLKSDV 923
L+ A + + D+ + R + S D G + + PPE K + +SDV
Sbjct: 165 LVGANLL-VKIGDFGMSRDVYS---TDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDV 218
Query: 924 YAFGIILLELLT-GK------SSGEIV-CVDPGVV 950
++FG+IL E+ T GK S+ E++ C+ G V
Sbjct: 219 WSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 179
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 180 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 236
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 237 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 276
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 35/296 (11%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 57 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 111
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTI--VDLSNNRLSGDLS 347
NQ+ P+ ++T+ L ++ LSSN +S + A G ++ ++ S+N+++ DL
Sbjct: 112 LTLFNNQITDIDPLKNLTN--LNRLELSSNTISD-ISALSGLTSLQQLNFSSNQVT-DLK 167
Query: 348 RMQNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVI 407
+ N +E + +SSN ++ + + ++ L S +NN + P LG L +
Sbjct: 168 PLANLT-TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDEL 222
Query: 408 DLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLA 467
L+ N L + + + T LTDL+L+ N S PL +G T+ LT L L
Sbjct: 223 SLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK---LTELKLG 269
Query: 468 YNSLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVP 522
N +S L G++ N L L+ N+ E P L + FNN+S + P
Sbjct: 270 ANQISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNISDISP 322
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 80 NFSFPTIIGLKMLCNVS------VSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGI 133
NFS + LK L N++ +S+N+ + +I+ + + +LE L ++N + P GI
Sbjct: 157 NFSSNQVTDLKPLANLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGI 215
Query: 134 V--------------------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRF 173
+ SL NL L++++N P GL KL L L AN+
Sbjct: 216 LTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQI 273
Query: 174 GGDIMHLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDG 233
+ L+ L ++ +++L+ NQ + NIS+ S V L
Sbjct: 274 SN--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR 331
Query: 234 MPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
+ +++N +V D S S + ++ L G NQ+S P+A
Sbjct: 332 LFFYNN-KVSDVS---------SLANLTNINWLSAGHNQISDLTPLA 368
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 120
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 179
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 180 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 236
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 237 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 276
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 277 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 35/296 (11%)
Query: 232 DGMPYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVAXXXXXXXXXXX 291
DG+ Y +NL + SNN L P N + IL + +NQ++ P+A
Sbjct: 57 DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDIL-MNNNQIADITPLA----NLTNLTG 111
Query: 292 XXXXXNQLE--GPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDL--SNNRLSGDLS 347
NQ+ P+ ++T+ L ++ LSSN +S + A G ++ L S+N+++ DL
Sbjct: 112 LTLFNNQITDIDPLKNLTN--LNRLELSSNTISD-ISALSGLTSLQQLSFSSNQVT-DLK 167
Query: 348 RMQNWGNYVEDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVI 407
+ N +E + +SSN ++ + + ++ L S +NN + P LG L +
Sbjct: 168 PLANLT-TLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDEL 222
Query: 408 DLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLA 467
L+ N L + + + T LTDL+L+ N S PL +G T+ LT L L
Sbjct: 223 SLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--------SGLTK---LTELKLG 269
Query: 468 YNSLSG-RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVP 522
N +S L G++ N L L+ N+ E P L + FNN+S + P
Sbjct: 270 ANQISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLTLYFNNISDISP 322
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 41/226 (18%)
Query: 81 FSFPTIIGLKMLCNVS------VSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIV 134
FS + LK L N++ +S+N+ + +I+ + + +LE L ++N + P GI+
Sbjct: 158 FSSNQVTDLKPLANLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGIL 216
Query: 135 --------------------SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFG 174
SL NL L++++N P GL KL L L AN+
Sbjct: 217 TNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 274
Query: 175 GDIMHLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGM 234
+ L+ L ++ +++L+ NQ + NIS+ S V L +
Sbjct: 275 N--ISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 332
Query: 235 PYFDNLEVFDASNNHLVGAIPSFNFVFSLRILRLGSNQLSGSLPVA 280
+F N +V D S S + ++ L G NQ+S P+A
Sbjct: 333 -FFSNNKVSDVS---------SLANLTNINWLSAGHNQISDLTPLA 368
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor Receptor
1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 112
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 171
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 172 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 228
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 229 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 268
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 269 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In
Complex With Arq 069
Length = 306
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 109
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 168
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 169 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 225
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 226 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 265
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 266 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 123/307 (40%), Gaps = 39/307 (12%)
Query: 724 SLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSIL----AVKRLREGIA-KGKKEFAR 777
+L+ +E +V+G GT+YK + G + A+K LRE + K KE
Sbjct: 9 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
E + ++ +P++ L G +I + L Y++E +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDN----IGSQYL 121
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVL 897
L V +A+ +NYL + R + H +L + N+L++ P + +TD+ ++L A +
Sbjct: 122 LNWCVQIAKGMNYLEDRRLV-HRDLAARNVLVKTP-QHVKITDFGRAKLL-GAEEKEYHA 178
Query: 898 NAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVR 957
G + + S + +SDV+++G+ + EL+T S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK------------------ 220
Query: 958 LLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTI 1016
+ ++ G + QPP D+ + +C ++ A RP + E S
Sbjct: 221 --PYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSK- 277
Query: 1017 VLEKDSQ 1023
+ +D Q
Sbjct: 278 -MARDPQ 283
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 113
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 172
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 173 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 229
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 230 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 269
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 270 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 738 EVIGR-SCHGTLYKATLDSGSILAVKRLREGIAKGKKE-FAREVKKLGNIKHPNLVSL-Q 794
E+IG G +YKA S+LA ++ + ++ + E + E+ L + HPN+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 795 GYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE 854
+Y+ E+ ++ + ++ + E + PL+ + V LNYLH+
Sbjct: 75 AFYY---ENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHDN 127
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE--FAST 912
+ I H +LK+ NIL + L D+ + T + G + PE T
Sbjct: 128 KII-HRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 913 SKPCP-SLKSDVYAFGIILLEL 933
SK P K+DV++ GI L+E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 41/274 (14%)
Query: 759 LAVKRLR-EGIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L+ + K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA--CTQDGPLYVIVEYASKGN 105
Query: 817 LAVYLQETDPRKLP-----------PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YLQ P L LS + + A VAR + YL +++ I H +L +
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI-HRDLAAR 164
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ + + D+ L R + + N + + PE + + +SDV+
Sbjct: 165 NVLVTEDNVMKI-ADFGLARDIHHIDYYKKTTNGRLPVKWMAPE--ALFDRIYTHQSDVW 221
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPR 984
+FG++L E+ T S PGV E +L+ +GH M++P
Sbjct: 222 SFGVLLWEIFTLGGSPY-----PGV---------------PVEELFKLLKEGHRMDKPSN 261
Query: 985 ILSDMLQVALRCILPA-SERPDMMSVFEELSTIV 1017
+++ + C S+RP + E+L IV
Sbjct: 262 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 756 GSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEK---LVISNYI 812
G+ +AVK ++ + F E + ++H NLV L G EK +++ Y+
Sbjct: 35 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLYIVTEYM 88
Query: 813 NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
SL YL+ R L D L+ ++DV + YL + H +L + N+L+
Sbjct: 89 AKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV-HRDLAARNVLVSED 144
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLE 932
+ A ++D+ L T ++ Q + + PE + + S KSDV++FGI+L E
Sbjct: 145 NV-AKVSDFGL----TKEASSTQDTGKLPVKWTAPE--ALREAAFSTKSDVWSFGILLWE 197
Query: 933 LLT 935
+ +
Sbjct: 198 IYS 200
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 40/289 (13%)
Query: 739 VIGRSCHGTLYKAT-LDSG------SILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLV 791
VIG+ G +Y +D +I ++ R+ E + + F RE + + HPN++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE--MQQVEAFLREGLLMRGLNHPNVL 85
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
+L G P E V+ Y+ L +++ P++ P ++ + + + VAR + YL
Sbjct: 86 ALIGIML-PPEGLPHVLLPYMCHGDLLQFIRS--PQRNP--TVKDLISFGLQVARGMEYL 140
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR-ILTSAGTADQVLNAGALGYRPPEFA 910
++ + H +L + N +L+ + + D+ L R IL + Q L +
Sbjct: 141 AEQKFV-HRDLAARNCMLDE-SFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFD 970
S + KSDV++FG++L ELLT + + +DP DLT
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDP--FDLT----------------- 238
Query: 971 RLIMDGHDMEQPPRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+ G + QP + QV +C PA RP + E+ IV
Sbjct: 239 HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAV-RPTFRVLVGEVEQIV 286
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKATLDSGSILAVK----RLREGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
IGR T+YK LD+ + + V + R+ ++ F E + L ++HPN+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 796 YYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN 853
+ + +K ++++ + +L YL+ K+ L R + + L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----QILKGLQFLHT 147
Query: 854 ER-AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAST 912
I H +LK NI + PT + + D L L A A V+ PEF +
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL-ATLKRASFAKAVIGT-------PEFXAP 199
Query: 913 SKPCPSLKS--DVYAFGIILLELLTGK 937
DVYAFG LE T +
Sbjct: 200 EXYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 756 GSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEK---LVISNYI 812
G+ +AVK ++ + F E + ++H NLV L G EK +++ Y+
Sbjct: 44 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLYIVTEYM 97
Query: 813 NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
SL YL+ R L D L+ ++DV + YL + H +L + N+L+
Sbjct: 98 AKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV-HRDLAARNVLVSED 153
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLE 932
+ A ++D+ L T ++ Q + + PE K S KSDV++FGI+L E
Sbjct: 154 NV-AKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKF--STKSDVWSFGILLWE 206
Query: 933 LLT 935
+ +
Sbjct: 207 IYS 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 758 ILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLV-ISNYINAQS 816
++AVK L++ +K+F RE + L N++H ++V G E + L+ + Y+
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGV---CVEGDPLIMVFEYMKHGD 101
Query: 817 LAVYLQETDPRKL------PP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
L +L+ P + PP L+ + L +A +A + YL ++ + H +L + N L
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFV-HRDLATRNCL 160
Query: 869 LEAPTMNAVLTDYSLHRILTSAGTADQVLNAG----ALGYRPPEFASTSKPCPSLKSDVY 924
+ + + D+ + R + S D G + + PPE K + +SDV+
Sbjct: 161 V-GENLLVKIGDFGMSRDVYS---TDYYRVGGHTMLPIRWMPPESIMYRK--FTTESDVW 214
Query: 925 AFGIILLELLT-GK------SSGEIV-CVDPGVV 950
+ G++L E+ T GK S+ E++ C+ G V
Sbjct: 215 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV 248
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 34/255 (13%)
Query: 759 LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLA 818
+A+K ++EG + + +F E + + + HP LV L G ++ ++ ++ L+
Sbjct: 54 VAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLYGV--CLEQAPICLVFEFMEHGCLS 110
Query: 819 VYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL 878
YL+ R L + + L + +DV + YL E + H +L + N L+ + V
Sbjct: 111 DYLR--TQRGL--FAAETLLGMCLDVCEGMAYL-EEACVIHRDLAARNCLVGENQVIKV- 164
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+D+ + R + + + PE S S+ S KSDV++FG+++ E+ S
Sbjct: 165 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY--SSKSDVWSFGVLMWEVF---S 219
Query: 939 SGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCIL 998
G+I ENRS I G + +P + + Q+ C
Sbjct: 220 EGKI-----------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC-- 260
Query: 999 PASERPDMMSVFEEL 1013
ERP+ F L
Sbjct: 261 -WKERPEDRPAFSRL 274
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 756 GSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEK---LVISNYI 812
G+ +AVK ++ + F E + ++H NLV L G EK +++ Y+
Sbjct: 29 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLYIVTEYM 82
Query: 813 NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
SL YL+ R L D L+ ++DV + YL + H +L + N+L+
Sbjct: 83 AKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV-HRDLAARNVLVSED 138
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLE 932
+ A ++D+ L T ++ Q + + PE K S KSDV++FGI+L E
Sbjct: 139 NV-AKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKF--STKSDVWSFGILLWE 191
Query: 933 LLT 935
+ +
Sbjct: 192 IYS 194
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 736 PAEVIGRSCHGTLYKAT--LDSGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVS 792
P + +GR G +++A +D + A+KR+R +++ REVK L ++HP +V
Sbjct: 9 PIQCLGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLP-------PLSIDER-----LRV 840
+ EKL S + + +Y+Q RK +I+ER L +
Sbjct: 68 YFNAWLEKNTTEKLQPS----SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLT--DYSLHRILTSAGTADQVL- 897
+ +A + +LH+ + + H +LK +NI TM+ V+ D+ L + VL
Sbjct: 124 FLQIAEAVEFLHS-KGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 898 -------NAGALG---YRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
+ G +G Y PE S K D+++ G+IL ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPE--QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 755 SGSILAVKRLREGIAKGKKEFAR---EVKKLGNIKHPNLVSLQGYYWGPKEHEKLV-ISN 810
+G A+K L++ + K E A E + L N +HP L +L+ + + H++L +
Sbjct: 34 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK---YSFQTHDRLCFVME 90
Query: 811 YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLE 870
Y N L +L + S D ++ L+YLH+E+ + + +LK N++L+
Sbjct: 91 YANGGELFFHLS-----RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 145
Query: 871 APTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ +TD+ L + G + G Y PE + ++ D + G+++
Sbjct: 146 KDG-HIKITDFGLCKEGIKDGATMKXF-CGTPEYLAPEVLEDNDYGRAV--DWWGLGVVM 201
Query: 931 LELLTGK 937
E++ G+
Sbjct: 202 YEMMCGR 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK +I Y + + YL ++
Sbjct: 60 REVRIMKILNHPNIVKL----FEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEA 113
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
+ R + + Y H +R I H +LK+ N+LL+A MN + D+ T G D
Sbjct: 114 RSKFR---QIVSAVQYCHQKR-IVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLD 168
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
G+ Y PE F P + DV++ G+IL L++G
Sbjct: 169 TF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 67
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 68 VKLLDVI---HTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL---FQLLQGLAF 121
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 122 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 177
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 739 VIGRSCHGTLYKA-TLDSGSILAVKRL-REGIAKGK--KEFAREVKKLGNIKHPNLVSLQ 794
++G+ +Y+A ++ +G +A+K + ++ + K + EVK +KHP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 795 GYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE 854
Y+ + LV+ N + + YL+ ++ P S +E + + YLH+
Sbjct: 78 NYF-EDSNYVYLVLEMCHNGE-MNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSK 914
I H +L +N+LL MN + D+ L L L G Y PE A+ S
Sbjct: 132 -GILHRDLTLSNLLL-TRNMNIKIADFGLATQLKMPHEKHYTL-CGTPNYISPEIATRS- 187
Query: 915 PCPSLKSDVYAFGIILLELLTGK 937
L+SDV++ G + LL G+
Sbjct: 188 -AHGLESDVWSLGCMFYTLLIGR 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L++
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLSF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 756 GSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEK---LVISNYI 812
G+ +AVK ++ + F E + ++H NLV L G EK +++ Y+
Sbjct: 216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI----VEEKGGLYIVTEYM 269
Query: 813 NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
SL YL+ R L D L+ ++DV + YL + H +L + N+L+
Sbjct: 270 AKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV-HRDLAARNVLVSED 325
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLE 932
+ A ++D+ L T ++ Q + + PE K S KSDV++FGI+L E
Sbjct: 326 NV-AKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKF--STKSDVWSFGILLWE 378
Query: 933 LLT 935
+ +
Sbjct: 379 IYS 381
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 63
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L E++ ++ +++ Q L ++ + +P I L + + L +
Sbjct: 64 VKLLDVI--HTENKLYLVFEHVH-QDLKTFMDASALTGIPLPLIKSYL---FQLLQGLAF 117
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 118 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 174 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 71
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 72 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 125
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 126 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 181
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 182 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 37/223 (16%)
Query: 738 EVIGRSCHGTLYKAT--LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
E+IG G ++KA +D G ++R++ K + REVK L + H N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHRID-GKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVHYNG 72
Query: 796 YYWG----PKEHEKLVIS---------NYINAQSLAVYLQE-----------TDPRKLPP 831
+ G P+ + + S N +++ +++Q + R+
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 832 LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAG 891
L L + + + ++Y+H+++ I H +LK +NI L T + D+ L L + G
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKKLI-HRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDG 190
Query: 892 TADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
+ + G L Y PE S+ + D+YA G+IL ELL
Sbjct: 191 K--RTRSKGTLRYMSPEQISSQDYGKEV--DLYALGLILAELL 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 71
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 72 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 125
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 126 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 181
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 182 LLGXK-YYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 755 SGSILAVKRLREGIAKGKKEFAR---EVKKLGNIKHPNLVSLQGYYWGPKEHEKLV-ISN 810
+G A+K L++ + K E A E + L N +HP L +L+ + + H++L +
Sbjct: 175 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK---YSFQTHDRLCFVME 231
Query: 811 YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLE 870
Y N L +L + S D ++ L+YLH+E+ + + +LK N++L+
Sbjct: 232 YANGGELFFHLS-----RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 286
Query: 871 APTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ +TD+ L + G + G Y PE + ++ D + G+++
Sbjct: 287 KDG-HIKITDFGLCKEGIKDGATMKTF-CGTPEYLAPEVLEDNDYGRAV--DWWGLGVVM 342
Query: 931 LELLTGK 937
E++ G+
Sbjct: 343 YEMMCGR 349
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 65
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 66 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 119
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 120 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 175
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 176 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 755 SGSILAVKRLREGIAKGKKEFAR---EVKKLGNIKHPNLVSLQGYYWGPKEHEKLV-ISN 810
+G A+K L++ + K E A E + L N +HP L +L+ + + H++L +
Sbjct: 172 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK---YSFQTHDRLCFVME 228
Query: 811 YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLE 870
Y N L +L + S D ++ L+YLH+E+ + + +LK N++L+
Sbjct: 229 YANGGELFFHLS-----RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 283
Query: 871 APTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ +TD+ L + G + G Y PE + ++ D + G+++
Sbjct: 284 KDG-HIKITDFGLCKEGIKDGATMKTF-CGTPEYLAPEVLEDNDYGRAV--DWWGLGVVM 339
Query: 931 LELLTGK 937
E++ G+
Sbjct: 340 YEMMCGR 346
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 138
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 139 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 197
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + AG + A + + PPE F S K+D ++F
Sbjct: 198 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 249
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 250 GVLLWEIFS 258
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 63
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 64 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 117
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 118 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 174 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 161
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 220
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + AG + A + + PPE F S K+D ++F
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 272
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 273 GVLLWEIFS 281
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 66
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 67 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 120
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 121 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 176
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 177 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 67
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 68 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 121
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 122 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 177
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVS-LQGY 796
E+ R G ++KA L +AVK + K + RE+ +KH NL+ +
Sbjct: 21 EIKARGRFGCVWKAQL-MNDFVAVK-IFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 797 YWGPK-EHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH--- 852
G E E +I+ + + SL YL K ++ +E VA ++R L+YLH
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL------KGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 853 -------NERAIPHGNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLNAGALGY 904
++ +I H + KS N+LL++ + AVL D+ L R D G Y
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKS-DLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 905 RPPEF---ASTSKPCPSLKSDVYAFGIILLELLT 935
PE A + L+ D+YA G++L EL++
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 67
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 68 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 121
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 122 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 177
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 66
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 67 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 120
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 121 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 176
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 177 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 68
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 69 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 122
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 123 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 178
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 179 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 68
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 69 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 122
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 123 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 178
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 179 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 66
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 67 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 120
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 121 CHSHRVL-HRDLKPENLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 176
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 177 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 67
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L E++ ++ +++ Q L ++ + +P I L + + L +
Sbjct: 68 VKLLDVI--HTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 121
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 122 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 177
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGXK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 63
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 64 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 117
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 118 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 174 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 65
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 66 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 119
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 120 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 175
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 176 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 63
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 64 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 117
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 118 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 173
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 174 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 65
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 66 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 119
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 120 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 175
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 176 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 65
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 66 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 119
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 120 CHSHRVL-HRDLKPENLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 175
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 176 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 730 EELSHAPAEVIGRSCHGTLYKA-TLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIK-H 787
E++ +E++G + + A +L +G AVK + + + REV+ L + +
Sbjct: 11 EDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 788 PNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARC 847
N++ L ++ + ++ + S+ ++Q K + E RV DVA
Sbjct: 71 KNILELIEFF--EDDTRFYLVFEKLQGGSILAHIQ-----KQKHFNEREASRVVRDVAAA 123
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNA--VLTDY------SLHRILTSAGTADQVLNA 899
L++LH + I H +LK NIL E+P + + D+ L+ T T +
Sbjct: 124 LDFLHT-KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 900 GALGYRPPEFASTSKPCPSL---KSDVYAFGIILLELLTG 936
G+ Y PE + + D+++ G++L +L+G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 63
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 64 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 117
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 118 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 173
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 174 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 755 SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
SG I+A K + I + + RE++ L P +V G ++ + E + +++
Sbjct: 40 SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISICMEHMD 97
Query: 814 AQSLAVYLQETDPRKLPPLSIDERL-RVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
SL L+E +++P +E L +V++ V R L YL + I H ++K +NIL+ +
Sbjct: 98 GGSLDQVLKEA--KRIP----EEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS- 150
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
L D+ + S D + N+ G Y PE + S++SD+++ G+ L
Sbjct: 151 RGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMAPERLQGTH--YSVQSDIWSMGLSL 203
Query: 931 LELLTGK 937
+EL G+
Sbjct: 204 VELAVGR 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G G +YKA ++G++ A K + + +++ E++ L HP +V L G Y+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+ + ++ + ++ + E D R L I R ++ LN+LH++R I
Sbjct: 79 --HDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEA---LNFLHSKRII- 131
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLNAGALGYRPPE--FASTSKP 915
H +LK+ N+L+ + L D+ + + L + D + G + PE T K
Sbjct: 132 HRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKD 188
Query: 916 CP-SLKSDVYAFGIILLEL 933
P K+D+++ GI L+E+
Sbjct: 189 TPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+G G +YKA ++G++ A K + + +++ E++ L HP +V L G Y+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
+ + ++ + ++ + E D R L I R ++ LN+LH++R I
Sbjct: 87 --HDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEA---LNFLHSKRII- 139
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLNAGALGYRPPE--FASTSKP 915
H +LK+ N+L+ + L D+ + + L + D + G + PE T K
Sbjct: 140 HRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKD 196
Query: 916 CP-SLKSDVYAFGIILLEL 933
P K+D+++ GI L+E+
Sbjct: 197 TPYDYKADIWSLGITLIEM 215
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
EV R G ++KA L +AVK + + E+ EV L +KH N++ G
Sbjct: 30 EVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGA 86
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQE---TDPRKLPPLSIDERLRVAVDVARCLNYLH- 852
EK S ++ + + ++ +D K +S +E +A +AR L YLH
Sbjct: 87 -------EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHE 139
Query: 853 --------NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTA-DQVLNAGALG 903
++ AI H ++KS N+LL+ + A + D+ L + +A D G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLK-NNLTACIADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 904 YRPPEF---ASTSKPCPSLKSDVYAFGIILLEL 933
Y PE A + L+ D+YA G++L EL
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPENLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 21/230 (9%)
Query: 715 AGDLHLFDVSLMFTAEELSHAPAEV--IGRSCHGTLYKAT-LDSGSILAVKRLREGIAKG 771
AG L DV+ +F ++ +++ IG G +Y A + + ++A+K++ +
Sbjct: 35 AGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS 94
Query: 772 KKEFA---REVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK 828
+++ +EV+ L ++HPN + +G Y +EH ++ Y A L E +
Sbjct: 95 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYL--REHTAWLVMEYCLGS--ASDLLEVHKK- 149
Query: 829 LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILT 888
PL E V + L YLH+ I H ++K+ NILL P + L D+ I+
Sbjct: 150 --PLQEVEIAAVTHGALQGLAYLHSHNMI-HRDVKAGNILLSEPGL-VKLGDFGSASIMA 205
Query: 889 SAGTADQVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTGK 937
A G + PE + + K DV++ GI +EL K
Sbjct: 206 PANXF-----VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 18/205 (8%)
Query: 739 VIGRSCHGTLYKATLDS-GSILAVKRLREG--IAKGKKEFAREVKKLGNIKHPNLVSLQG 795
IG +G K S G IL K L G K+ EV L +KHPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 796 YYWGPKEHEKLVISNYINAQSLA-VYLQETDPRKLPPLSIDER--LRVAVDVARCLNYLH 852
++ Y LA V + T R+ +DE LRV + L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY----LDEEFVLRVMTQLTLALKECH 128
Query: 853 NE----RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
+ H +LK N+ L+ N L D+ L RIL + + G Y PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTF-VGTPYYMSPE 186
Query: 909 FASTSKPCPSLKSDVYAFGIILLEL 933
++ + KSD+++ G +L EL
Sbjct: 187 --QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 18/205 (8%)
Query: 739 VIGRSCHGTLYKATLDS-GSILAVKRLREG--IAKGKKEFAREVKKLGNIKHPNLVSLQG 795
IG +G K S G IL K L G K+ EV L +KHPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 796 YYWGPKEHEKLVISNYINAQSLA-VYLQETDPRKLPPLSIDER--LRVAVDVARCLNYLH 852
++ Y LA V + T R+ +DE LRV + L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY----LDEEFVLRVMTQLTLALKECH 128
Query: 853 NE----RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
+ H +LK N+ L+ N L D+ L RIL + + G Y PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAF-VGTPYYMSPE 186
Query: 909 FASTSKPCPSLKSDVYAFGIILLEL 933
++ + KSD+++ G +L EL
Sbjct: 187 --QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 31/171 (18%)
Query: 774 EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP-- 831
+F E++ + +IK+ ++ +G +I+NY + Y++ K
Sbjct: 89 DFKNELQIITDIKNEYCLTCEG-----------IITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 832 --LSIDERLRVAVDVARCL--------NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDY 881
L + + + V +C+ +Y+HNE+ I H ++K +NIL++ L+D+
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDK-NGRVKLSDF 196
Query: 882 SLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
S D+ + G + PPEF S K D+++ GI L
Sbjct: 197 G-----ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ E +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI---------------PVEELFKLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 40/258 (15%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKG--KKEFAREVKKLGNIKHPN 789
E +G G +YK L + +A+K L++ A+G ++EF E ++HPN
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPN 90
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER-----------L 838
+V L G K+ +I +Y + L +L P + D+R +
Sbjct: 91 VVCLLGVV--TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 839 RVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN 898
+ +A + YL + + H +L + N+L+ +N ++D L R + +A + N
Sbjct: 149 HLVAQIAAGMEYLSSHHVV-HKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 899 A-GALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-------GKSSGEIV------C 944
+ + + PE K S+ SD++++G++L E+ + G S+ ++V
Sbjct: 207 SLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 264
Query: 945 VDPGVVDLTDWVRLLALE 962
V P D WV L +E
Sbjct: 265 VLPCPDDCPAWVYALMIE 282
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 40/258 (15%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKG--KKEFAREVKKLGNIKHPN 789
E +G G +YK L + +A+K L++ A+G ++EF E ++HPN
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEAMLRARLQHPN 73
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER-----------L 838
+V L G K+ +I +Y + L +L P + D+R +
Sbjct: 74 VVCLLGVV--TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 839 RVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN 898
+ +A + YL + + H +L + N+L+ +N ++D L R + +A + N
Sbjct: 132 HLVAQIAAGMEYLSSHHVV-HKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 899 A-GALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-------GKSSGEIV------C 944
+ + + PE K S+ SD++++G++L E+ + G S+ ++V
Sbjct: 190 SLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 247
Query: 945 VDPGVVDLTDWVRLLALE 962
V P D WV L +E
Sbjct: 248 VLPCPDDCPAWVYALMIE 265
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 731 ELSHAPAEVIGRSCHGTL-YKATLDSGSILAVKRLREGIAKGKKEFA-REVKKLGNI-KH 787
++S P +V+G GT+ Y+ D+ + + L E + FA REV+ L +H
Sbjct: 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEH 77
Query: 788 PNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK--LPPLSIDERLRVAVDVA 845
PN++ Y+ K+ + I+ + A +L Y+++ D L P+++ ++ +
Sbjct: 78 PNVIR---YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAP----TMNAVLTDYSLHRILTSAGTADQVLNA-- 899
LN I H +LK NIL+ P + A+++D+ L + L + +
Sbjct: 135 HSLN-------IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 900 GALGYRPPEFAST-SKPCPSLKSDVYAFGIILLELLTGKS 938
G G+ PE S K P+ D+++ G + +++ S
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 738 EVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKE-----FAREVKKLGNIKHPNLV 791
+ +G T+YKA ++ I+A+K+++ G K+ RE+K L + HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L + G K + LV L V +++ + L P I + + + + L YL
Sbjct: 76 GLLDAF-GHKSNISLVFD--FMETDLEVIIKD-NSLVLTPSHIKAYMLMTL---QGLEYL 128
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTA--DQVLNAGALGYRPP 907
H + I H +LK N+LL+ N V L D+ L + S A QV+ YR P
Sbjct: 129 H-QHWILHRDLKPNNLLLDE---NGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAP 181
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELL 934
E ++ + D++A G IL ELL
Sbjct: 182 ELLFGAR-MYGVGVDMWAVGCILAELL 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ E +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI---------------PVEELFKLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 65
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + + L ++ + +P I L + + L +
Sbjct: 66 VKLLDVI---HTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 119
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 120 CHSHRVL-HRDLKPENLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 175
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 176 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 749 YKATLD-SGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL 806
Y T D +G ++AVK L+ + + + +E+ L + H +++ +G E
Sbjct: 35 YDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQ 94
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTN 866
++ Y+ SL YL PR + + + L A + + YLH++ I H NL + N
Sbjct: 95 LVMEYVPLGSLRDYL----PRH--SIGLAQLLLFAQQICEGMAYLHSQHYI-HRNLAARN 147
Query: 867 ILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVY 924
+LL+ + + D+ L + + +V G + + PE K SDV+
Sbjct: 148 VLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF--YYASDVW 204
Query: 925 AFGIILLELLTGKSSGE 941
+FG+ L ELLT S +
Sbjct: 205 SFGVTLYELLTHCDSSQ 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 67
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + + L ++ + +P I L + + L +
Sbjct: 68 VKLLDVI---HTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 121
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 122 CHSHRVL-HRDLKPENLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 177
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 119
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 178
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 179 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 233
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 234 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 273
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 274 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 47/283 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 114
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 115 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLTAR 173
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 174 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 228
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 229 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 268
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIVLEKDSQ 1023
+++ + C +P S+RP + E+L I+ +Q
Sbjct: 269 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRILTLTTNQ 310
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + + H N+V G + + ++ + L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 135
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 194
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 246
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 247 GVLLWEIFS 255
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 67
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + + L ++ + +P I L + + L +
Sbjct: 68 VKLLDVI---HTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQGLAF 121
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 122 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 177
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 739 VIGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
V+G+ +G +Y S + +A+K + E ++ + E+ ++KH N+V G +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 798 WGPKEHEKL-VISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNE 854
E+ + + + SL+ L+ K PL +E+ + L YLH+
Sbjct: 75 ---SENGFIKIFMEQVPGGSLSALLRS----KWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSK 914
+ I H ++K N+L+ + ++D+ + L + G L Y PE
Sbjct: 128 Q-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGP 185
Query: 915 PCPSLKSDVYAFGIILLELLTGK 937
+D+++ G ++E+ TGK
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGK 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILMELMAGGDL 135
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 194
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 246
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 247 GVLLWEIFS 255
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In
Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 116
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 117 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 175
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 176 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 230
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 231 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 270
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 271 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 306
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 359 IHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFL 418
++L+ N L + +++ +LTS V N++ P + P LKV++L N L+
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 89
Query: 419 LPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPG 478
+F T LT+L+L N+ +Q+I+NNP +L +LDL++N LS L
Sbjct: 90 DKTFAFCTNLTELHLMSNS------IQKIKNNPFVKQK---NLITLDLSHNGLSSTKLGT 140
Query: 479 ISKFHNLVYLNLSNNKFEGSIPDGLP----NGLKEFNVSFNNLSGVVP 522
+ NL L LSNNK + + L + LK+ +S N + P
Sbjct: 141 QVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 69 SIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGS-IQSLEFLDLSHNL--F 125
SI L + + +FSF LK L ++++ +N + G +++ + + +L++L LS++
Sbjct: 311 SISLASLPKIDDFSFQ---WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367
Query: 126 HGLIPSGIVSLKN--LMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDI 177
L VSL + L +LN++ N F LG L+ LDL N G ++
Sbjct: 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 112 IQSLEFLDLSHN----LFHGLIPSGIV----SLKNLMLLNISSNSFEGTFPSGFGGLGKL 163
++ LE LDL HN L+ P G + L +L +LN+ SN F+ F L +L
Sbjct: 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562
Query: 164 KYLDLRAN 171
K +DL N
Sbjct: 563 KIIDLGLN 570
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 359 IHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFL 418
++L+ N L + +++ +LTS V N++ P + P LKV++L N L+
Sbjct: 40 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 99
Query: 419 LPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPG 478
+F T LT+L+L N+ +Q+I+NNP +L +LDL++N LS L
Sbjct: 100 DKTFAFCTNLTELHLMSNS------IQKIKNNPFVKQK---NLITLDLSHNGLSSTKLGT 150
Query: 479 ISKFHNLVYLNLSNNKFEGSIPDGLP----NGLKEFNVSFNNLSGVVP 522
+ NL L LSNNK + + L + LK+ +S N + P
Sbjct: 151 QVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 198
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 69 SIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGS-IQSLEFLDLSHNL--F 125
SI L + + +FSF LK L ++++ +N + G +++ + + +L++L LS++
Sbjct: 321 SISLASLPKIDDFSFQ---WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 377
Query: 126 HGLIPSGIVSLKN--LMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDI 177
L VSL + L +LN++ N F LG L+ LDL N G ++
Sbjct: 378 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 431
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 112 IQSLEFLDLSHN----LFHGLIPSGIV----SLKNLMLLNISSNSFEGTFPSGFGGLGKL 163
++ LE LDL HN L+ P G + L +L +LN+ SN F+ F L +L
Sbjct: 513 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 572
Query: 164 KYLDLRAN 171
K +DL N
Sbjct: 573 KIIDLGLN 580
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILMELMAGGDL 120
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 179
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 231
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 232 GVLLWEIFS 240
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+K++R EG+ RE+ L + HPN+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA---IREISLLKELNHPNI 66
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + + L ++ + +P I L + + L +
Sbjct: 67 VKLLDVI---HTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQGLAF 120
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 121 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYRAPEI 176
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 177 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVGYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 96 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R TAD++ A YR PE
Sbjct: 150 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTADEMTGYVATRWYRAPEIML 202
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 203 NWMHY-NQTVDIWSVGCIMAELLTGRT 228
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 359 IHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFL 418
++L+ N L + +++ +LTS V N++ P + P LKV++L N L+
Sbjct: 35 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLS 94
Query: 419 LPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPG 478
+F T LT+L+L N+ +Q+I+NNP +L +LDL++N LS L
Sbjct: 95 DKTFAFCTNLTELHLMSNS------IQKIKNNPFVKQK---NLITLDLSHNGLSSTKLGT 145
Query: 479 ISKFHNLVYLNLSNNKFEGSIPDGLP----NGLKEFNVSFNNLSGVVP 522
+ NL L LSNNK + + L + LK+ +S N + P
Sbjct: 146 QVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 193
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 69 SIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGS-IQSLEFLDLSHNL--F 125
SI L + + +FSF LK L ++++ +N + G +++ + + +L++L LS++
Sbjct: 316 SISLASLPKIDDFSFQ---WLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 372
Query: 126 HGLIPSGIVSLKN--LMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDI 177
L VSL + L +LN++ N F LG L+ LDL N G ++
Sbjct: 373 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 426
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 112 IQSLEFLDLSHN----LFHGLIPSGIV----SLKNLMLLNISSNSFEGTFPSGFGGLGKL 163
++ LE LDL HN L+ P G + L +L +LN+ SN F+ F L +L
Sbjct: 508 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 567
Query: 164 KYLDLRAN 171
K +DL N
Sbjct: 568 KIIDLGLN 575
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + + H N+V G + + ++ + L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 121
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 180
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 232
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 233 GVLLWEIFS 241
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 740 IGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFA---REVKKLGNIKHPNLVSLQG 795
IG G +Y A + + ++A+K++ + +++ +EV+ L ++HPN + +G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
Y +EH ++ Y A L E + PL E V + L YLH+
Sbjct: 83 CYL--REHTAWLVMEYCLGS--ASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE-FASTSK 914
I H ++K+ NILL P + L D+ I+ A G + PE + +
Sbjct: 136 MI-HRDVKAGNILLSEPGL-VKLGDFGSASIMAPANXF-----VGTPYWMAPEVILAMDE 188
Query: 915 PCPSLKSDVYAFGIILLELLTGK 937
K DV++ GI +EL K
Sbjct: 189 GQYDGKVDVWSLGITCIELAERK 211
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 96 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R TAD++ A YR PE
Sbjct: 150 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTADEMTGYVATRWYRAPEIML 202
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 203 NWMHY-NQTVDIWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 96 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R TAD++ A YR PE
Sbjct: 150 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTADEMTGYVATRWYRAPEIML 202
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 203 NWMHY-NQTVDIWSVGCIMAELLTGRT 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 739 VIGRSCHGTLYKATLDSGSI-LAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYY 797
V+G+ +G +Y S + +A+K + E ++ + E+ ++KH N+V G +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 798 WGPKEHEKLVISNYIN---AQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLH 852
E I ++ SL+ L+ K PL +E+ + L YLH
Sbjct: 89 -----SENGFIKIFMEQVPGGSLSALLRS----KWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAST 912
+ + I H ++K N+L+ + ++D+ + L + G L Y PE
Sbjct: 140 DNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDK 197
Query: 913 SKPCPSLKSDVYAFGIILLELLTGK 937
+D+++ G ++E+ TGK
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+ ++R EG+ RE+ L + HPN+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA---IREISLLKELNHPNI 64
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 65 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 118
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 119 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 174
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 175 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 737 AEVIGRSCHGTLYKATLD-SGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNL 790
E IG +G +YKA +G ++A+ ++R EG+ RE+ L + HPN+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA---IREISLLKELNHPNI 63
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
V L KL + Q L ++ + +P I L + + L +
Sbjct: 64 VKLLDVI---HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAF 117
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H+ R + H +LK N+L+ T A+ L D+ L R L YR PE
Sbjct: 118 CHSHRVL-HRDLKPQNLLIN--TEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEI 173
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K S D+++ G I E++T ++
Sbjct: 174 LLGCK-YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 112
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 113 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 171
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 172 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 223
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 224 GVLLWEIFS 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N++ L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 120
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 179
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 231
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 232 GVLLWEIFS 240
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L + H N+++L Y + ++I ++ L +L +
Sbjct: 54 RRGVSR--EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ LS +E + +NYLH ++ I H +LK NI+L P + L D+
Sbjct: 110 E-----SLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 882 SL-HRILTSAGTADQVLNAGALGYRPPEFASTS----KPCPSLKSDVYAFGIILLELLTG 936
L H I D V G PEF + +P L++D+++ G+I LL+G
Sbjct: 164 GLAHEI------EDGVEFKNIFG--TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSG 214
Query: 937 KS 938
S
Sbjct: 215 AS 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNI--KHPNLVSLQG 795
E +G+ +G +++ + G +AVK ++ +K + RE + + +H N++
Sbjct: 43 ECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 796 YYWGPKEH--EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN 853
+ + +I++Y SL YLQ L L LR+ + +A L +LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 854 E-------RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN---AGALG 903
E AI H +LKS NIL++ + D L + + + V N G
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 904 YRPPEFASTSKPCPSLKS----DVYAFGIILLELLTGKSSGEIV 943
Y PE + S D++AFG++L E+ S IV
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 255
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVAYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+ + +E REV L + HPN+++L Y + ++I ++ L +L +
Sbjct: 54 RRGVCR--EEIEREVSILRQVLHPNIITLHDVY--ENRTDVVLILELVSGGELFDFLAQK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ LS +E + +NYLH ++ I H +LK NI+L P + L D+
Sbjct: 110 E-----SLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 882 SL-HRILTSAGTADQVLNAGALGYRPPEFASTS----KPCPSLKSDVYAFGIILLELLTG 936
L H I D V G PEF + +P L++D+++ G+I LL+G
Sbjct: 164 GLAHEI------EDGVEFKNIFG--TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSG 214
Query: 937 KS 938
S
Sbjct: 215 AS 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 755 SGSILAVKRLREGIAKGKKEFAR---EVKKLGNIKHPNLVSLQGYYWGPKEHEKLV-ISN 810
+G A+K L++ + K E A E + L N +HP L +L+ + + H++L +
Sbjct: 32 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK---YSFQTHDRLCFVME 88
Query: 811 YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLE 870
Y N L +L S D ++ L+YLH+E+ + + +LK N++L+
Sbjct: 89 YANGGELFFHLSRERV-----FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 143
Query: 871 APTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ +TD+ L + G + G Y PE + ++ D + G+++
Sbjct: 144 KDG-HIKITDFGLCKEGIKDGATMKXF-CGTPEYLAPEVLEDNDYGRAV--DWWGLGVVM 199
Query: 931 LELLTGK 937
E++ G+
Sbjct: 200 YEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 755 SGSILAVKRLREGIAKGKKEFAR---EVKKLGNIKHPNLVSLQGYYWGPKEHEKLV-ISN 810
+G A+K L++ + K E A E + L N +HP L +L+ + + H++L +
Sbjct: 33 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK---YSFQTHDRLCFVME 89
Query: 811 YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLE 870
Y N L +L S D ++ L+YLH+E+ + + +LK N++L+
Sbjct: 90 YANGGELFFHLSRERV-----FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 144
Query: 871 APTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIIL 930
+ +TD+ L + G + G Y PE + ++ D + G+++
Sbjct: 145 KDG-HIKITDFGLCKEGIKDGATMKXF-CGTPEYLAPEVLEDNDYGRAV--DWWGLGVVM 200
Query: 931 LELLTGK 937
E++ G+
Sbjct: 201 YEMMCGR 207
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 762 KRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYL 821
K R G+++ ++ REV L I+HPN+++L Y + + ++I + L +L
Sbjct: 50 KSSRRGVSR--EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFL 105
Query: 822 QETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVL 878
E + L+ +E + + YLH+ + I H +LK NI+L P +
Sbjct: 106 AEKE-----SLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
D+ L + + G + PE + +P L++D+++ G+I LL+G S
Sbjct: 160 IDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 811 YINAQSLAVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
++ +SL+ +E P L L+++ + + VA+ + +L + + I H +L + NIL
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNIL 223
Query: 869 LEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSDVYA 925
L + + D+ L R + D V A L + PE + +++SDV++
Sbjct: 224 LSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSDVWS 278
Query: 926 FGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRI 985
FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 279 FGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAPDYT 319
Query: 986 LSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 320 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 352
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 749 YKATLD-SGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL 806
Y T D +G ++AVK L+ + + + +E+ L + H +++ +G E
Sbjct: 35 YDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQ 94
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTN 866
++ Y+ SL YL PR + + + L A + + YLH + I H NL + N
Sbjct: 95 LVMEYVPLGSLRDYL----PRH--SIGLAQLLLFAQQICEGMAYLHAQHYI-HRNLAARN 147
Query: 867 ILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVY 924
+LL+ + + D+ L + + +V G + + PE K SDV+
Sbjct: 148 VLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF--YYASDVW 204
Query: 925 AFGIILLELLTGKSSGE 941
+FG+ L ELLT S +
Sbjct: 205 SFGVTLYELLTHCDSSQ 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ K + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 121
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 180
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 232
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 233 GVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 137
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 138 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 196
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 197 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 248
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 249 GVLLWEIFS 257
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 753 LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPK--EHEKLVISN 810
L G A+KR+ + ++E RE HPN++ L Y + +HE ++
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 811 YINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLE 870
+ +L ++ K L+ D+ L + + + R L +H + H +LK TNILL
Sbjct: 111 FFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIH-AKGYAHRDLKPTNILLG 168
Query: 871 APTMNAVLTDYSLHRILTSAGTADQVLNAG-------ALGYRPPEFASTSKPCP-SLKSD 922
++ S+++ + Q L + YR PE S C ++D
Sbjct: 169 DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD 228
Query: 923 VYAFGIILLELLTGKSSGEIV 943
V++ G +L ++ G+ ++V
Sbjct: 229 VWSLGCVLYAMMFGEGPYDMV 249
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKGKKE-FAREVKKLGNI-KHPN 789
+ +G G + +AT D+ +AVK L+ +KE E+K + ++ +H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 790 LVSLQGY--YWGPKEHEKLVISNYINAQSLAVYLQ-----ETDPRKLPPLSIDERLRVAV 842
+V+L G + GP LVI+ Y L +L+ + D PL + + L +
Sbjct: 104 IVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 843 DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA- 901
VA+ + +L ++ I H ++ + N+LL + A + D+ L R + + ++ ++ A
Sbjct: 160 QVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMN--DSNYIVKGNAR 215
Query: 902 --LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLL 959
+ + PE S +++SDV+++GI+L E+ + + PG+
Sbjct: 216 LPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----PGI---------- 258
Query: 960 ALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTIVL 1018
L N F +L+ DG+ M QP ++ + C L + RP F+++ + +
Sbjct: 259 -LVNSK---FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP----TFQQICSFLQ 310
Query: 1019 EKDSQGK 1025
E+ + +
Sbjct: 311 EQAQEDR 317
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 135
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 194
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSDVYAFGIILLE 932
V + D+ + R + A + A + + PPE + + + K+D ++FG++L E
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE--AFMEGIFTSKTDTWSFGVLLWE 252
Query: 933 LLT 935
+ +
Sbjct: 253 IFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 127
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 128 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 186
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 187 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 238
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 239 GVLLWEIFS 247
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel
Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 811 YINAQSLAVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
++ +SL+ +E P L L+++ + + VA+ + +L + + I H +L + NIL
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNIL 225
Query: 869 LEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSDVYA 925
L + + D+ L R + D V A L + PE + +++SDV++
Sbjct: 226 LSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSDVWS 280
Query: 926 FGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRI 985
FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 281 FGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAPDYT 321
Query: 986 LSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L DY L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DYGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 811 YINAQSLAVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
++ +SL+ +E P L L+++ + + VA+ + +L + + I H +L + NIL
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNIL 232
Query: 869 LEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSDVYA 925
L + + D+ L R + D V A L + PE + +++SDV++
Sbjct: 233 LSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSDVWS 287
Query: 926 FGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRI 985
FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 288 FGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAPDYT 328
Query: 986 LSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 329 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 361
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 109 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 163 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMXGXVATRWYRAPEIML 215
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 216 NWMHY-NQTVDIWSVGCIMAELLTGRT 241
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 79/204 (38%), Gaps = 18/204 (8%)
Query: 740 IGRSCHGTLYKATLDS-GSILAVKRLREG--IAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
IG +G K S G IL K L G K+ EV L +KHPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 797 YWGPKEHEKLVISNYINAQSLA-VYLQETDPRKLPPLSIDER--LRVAVDVARCLNYLHN 853
++ Y LA V + T R+ +DE LRV + L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY----LDEEFVLRVMTQLTLALKECHR 129
Query: 854 E----RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEF 909
+ H +LK N+ L+ N L D+ L RIL + G Y PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAKEF-VGTPYYMSPE- 186
Query: 910 ASTSKPCPSLKSDVYAFGIILLEL 933
++ + KSD+++ G +L EL
Sbjct: 187 -QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ + D+++ G I+ ELLTG++
Sbjct: 196 NAMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 811 YINAQSLAVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
++ +SL+ +E P L L+++ + + VA+ + +L + + I H +L + NIL
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNIL 230
Query: 869 LEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSDVYA 925
L + + D+ L R + D V A L + PE + +++SDV++
Sbjct: 231 LSEKNVVKI-CDFGLARDIYK--DPDYVRKGDARLPLKWMAPE--TIFDRVYTIQSDVWS 285
Query: 926 FGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRI 985
FG++L E+ + +S PGV + E F R + +G M P
Sbjct: 286 FGVLLWEIFSLGASPY-----PGV--------------KIDEEFCRRLKEGTRMRAPDYT 326
Query: 986 LSDMLQVALRCIL-PASERPDMMSVFEELSTIV 1017
+M Q L C S+RP + E L ++
Sbjct: 327 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 359
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 24/190 (12%)
Query: 755 SGSILAVKRL--REGIAKGKKE-FAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNY 811
+G AVK + R+ K KE REV+ L + HPN++ L ++ K + LV Y
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-EDKGYFYLVGEVY 108
Query: 812 INAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
+ E RK S + R+ V + Y+H + I H +LK N+LLE+
Sbjct: 109 TGGE----LFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLES 161
Query: 872 PTMNA--VLTDYSLH-RILTSAGTADQVLNAGALGYRPPEF--ASTSKPCPSLKSDVYAF 926
+ +A + D+ L S D++ G Y PE + + C DV++
Sbjct: 162 KSKDANIRIIDFGLSTHFEASKKMKDKI---GTAYYIAPEVLHGTYDEKC-----DVWST 213
Query: 927 GIILLELLTG 936
G+IL LL+G
Sbjct: 214 GVILYILLSG 223
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNI--KHPNLVSLQG 795
E +G+ +G +++ + G +AVK ++ +K + RE + + +H N++
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 796 YYWGPKEH--EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN 853
+ + +I++Y SL YLQ L L LR+ + +A L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 854 E-------RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN---AGALG 903
E AI H +LKS NIL++ + D L + + + V N G
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 904 YRPPEFASTSKPCPSLKS----DVYAFGIILLELLTGKSSGEIV 943
Y PE + S D++AFG++L E+ S IV
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 758 ILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
++AVK L+E +++F RE + L ++H ++V G + L++ Y+ L
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC--TEGRPLLMVFEYMRHGDL 107
Query: 818 AVYLQETDP-RKL---------PPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+L+ P KL PL + + L VA VA + YL + H +L + N
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFV-HRDLATRNC 166
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG----ALGYRPPEFASTSKPCPSLKSDV 923
L+ + + D+ + R + S D G + + PPE K + +SDV
Sbjct: 167 LV-GQGLVVKIGDFGMSRDIYS---TDYYRVGGRTMLPIRWMPPESILYRK--FTTESDV 220
Query: 924 YAFGIILLELLT 935
++FG++L E+ T
Sbjct: 221 WSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 758 ILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
++AVK L+E +++F RE + L ++H ++V G + L++ Y+ L
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC--TEGRPLLMVFEYMRHGDL 101
Query: 818 AVYLQETDP-RKL---------PPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+L+ P KL PL + + L VA VA + YL + H +L + N
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFV-HRDLATRNC 160
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG----ALGYRPPEFASTSKPCPSLKSDV 923
L+ + + D+ + R + S D G + + PPE K + +SDV
Sbjct: 161 LV-GQGLVVKIGDFGMSRDIYS---TDYYRVGGRTMLPIRWMPPESILYRK--FTTESDV 214
Query: 924 YAFGIILLELLT 935
++FG++L E+ T
Sbjct: 215 WSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 758 ILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
++AVK L+E +++F RE + L ++H ++V G + L++ Y+ L
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC--TEGRPLLMVFEYMRHGDL 130
Query: 818 AVYLQETDP-RKL---------PPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+L+ P KL PL + + L VA VA + YL + H +L + N
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFV-HRDLATRNC 189
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG----ALGYRPPEFASTSKPCPSLKSDV 923
L+ + + D+ + R + S D G + + PPE K + +SDV
Sbjct: 190 LV-GQGLVVKIGDFGMSRDIYS---TDYYRVGGRTMLPIRWMPPESILYRK--FTTESDV 243
Query: 924 YAFGIILLELLT 935
++FG++L E+ T
Sbjct: 244 WSFGVVLWEIFT 255
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 29/224 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNI--KHPNLVSLQG 795
E +G+ +G +++ + G +AVK ++ +K + RE + + +H N++
Sbjct: 14 ECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 796 YYWGPKEH--EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN 853
+ + +I++Y SL YLQ L L LR+ + +A L +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 854 E-------RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN---AGALG 903
E AI H +LKS NIL++ + D L + + + V N G
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 904 YRPPEFASTSKPCPSLKS----DVYAFGIILLELLTGKSSGEIV 943
Y PE + S D++AFG++L E+ S IV
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 727 FTAEELSHAPAEV---------IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKK 773
F +EL+ EV +G +G++ A +G +AVK+L + I K+
Sbjct: 4 FYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 774 EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLP 830
+ RE++ L ++KH N++ L + + E+ N L +L D K
Sbjct: 64 TY-RELRLLKHMKHENVIGLLDVFTPARSLEEF------NDVYLVTHLMGADLNNIVKCA 116
Query: 831 PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSA 890
L+ D + + R L Y+H+ I H +LK +N+ + +L D+ L R
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKIL-DFGLAR----- 169
Query: 891 GTADQVLNAGAL-GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
T D++ A YR PE + D+++ G I+ ELLTG++
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGRT 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 738 EVIGRSCHGTLY---KATL-DSGSILAVKRLREGIAKGKKEFAREVKK--LGNIKHPNLV 791
+V+G+ G ++ K T DSG + A+K L++ K + ++++ L ++ HP +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L +Y E + +I +++ L L +++ D + +A ++A L++L
Sbjct: 94 KL--HYAFQTEGKLYLILDFLRGGDLFTRLS----KEVMFTEEDVKFYLA-ELALGLDHL 146
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPP 907
H+ I + +LK NILL+ + LTD+ L S D A G + Y P
Sbjct: 147 HS-LGIIYRDLKPENILLDEEG-HIKLTDFGL-----SKEAIDHEKKAYSFCGTVEYMAP 199
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTG 936
E ++ S +D +++G+++ E+LTG
Sbjct: 200 EV--VNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 62 REVRIMKVLNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+A MN + D+ T D
Sbjct: 118 KFR-----QIVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLD 170
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
GA Y PE F P + DV++ G+IL L++G
Sbjct: 171 AF--CGAPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 209
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 33/176 (18%)
Query: 772 KKEFAREVKKLGNIKHPNLVSL------QGYYWGPKEHEKLVISNYINAQSLAVYLQETD 825
K+ REV+ L + HPN++ L +GY++ LV Y + E
Sbjct: 94 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY-------LVGEVYTGGE----LFDEII 142
Query: 826 PRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA--VLTDYSL 883
RK S + R+ V + Y+H + I H +LK N+LLE+ + +A + D+ L
Sbjct: 143 SRK--RFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGL 199
Query: 884 H-RILTSAGTADQVLNAGALGYRPPEF--ASTSKPCPSLKSDVYAFGIILLELLTG 936
S D++ G Y PE + + C DV++ G+IL LL+G
Sbjct: 200 STHFEASKKMKDKI---GTAYYIAPEVLHGTYDEKC-----DVWSTGVILYILLSG 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 139/307 (45%), Gaps = 52/307 (16%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKGKKE-FAREVKKLGNI-KHPN 789
+ +G G + +AT D+ +AVK L+ +KE E+K + ++ +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 790 LVSLQGY--YWGPKEHEKLVISNYINAQSLAVYLQ-----ETDPRKLPPLSIDERLRVAV 842
+V+L G + GP LVI+ Y L +L+ + D PL + + L +
Sbjct: 112 IVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 843 DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA- 901
VA+ + +L ++ I H ++ + N+LL + A + D+ L R + + ++ ++ A
Sbjct: 168 QVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMN--DSNYIVKGNAR 223
Query: 902 --LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLL 959
+ + PE S +++SDV+++GI+L E+ + + PG+
Sbjct: 224 LPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----PGI---------- 266
Query: 960 ALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELSTIVL 1018
L N F +L+ DG+ M QP ++ + C L + RP F+++ + +
Sbjct: 267 -LVNSK---FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP----TFQQICSFLQ 318
Query: 1019 EKDSQGK 1025
E+ + +
Sbjct: 319 EQAQEDR 325
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 33/176 (18%)
Query: 772 KKEFAREVKKLGNIKHPNLVSL------QGYYWGPKEHEKLVISNYINAQSLAVYLQETD 825
K+ REV+ L + HPN++ L +GY++ LV Y + E
Sbjct: 93 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY-------LVGEVYTGGE----LFDEII 141
Query: 826 PRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA--VLTDYSL 883
RK S + R+ V + Y+H + I H +LK N+LLE+ + +A + D+ L
Sbjct: 142 SRK--RFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGL 198
Query: 884 H-RILTSAGTADQVLNAGALGYRPPEF--ASTSKPCPSLKSDVYAFGIILLELLTG 936
S D++ G Y PE + + C DV++ G+IL LL+G
Sbjct: 199 STHFEASKKMKDKI---GTAYYIAPEVLHGTYDEKC-----DVWSTGVILYILLSG 246
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 62 REVRIMKVLNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+A MN + D+ T D
Sbjct: 118 KFR-----QIVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLD 170
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
+ G+ Y PE F P + DV++ G+IL L++G
Sbjct: 171 EF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 47/277 (16%)
Query: 759 LAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPNLVSLQGYYWGPKEHEKLVISNYINAQS 816
+AVK L++ + + E++ + I KH N+++L G ++ VI Y + +
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGN 127
Query: 817 LAVYLQETDP---------RKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
L YL+ P ++P ++ + + +AR + YL +++ I H +L +
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI-HRDLAAR 186
Query: 866 NILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAG-ALGYRPPEFASTSKPCPSLKSD 922
N+L+ T N V+ D+ L R + + + N + + PE + + +SD
Sbjct: 187 NVLV---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE--ALFDRVYTHQSD 241
Query: 923 VYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQP 982
V++FG+++ E+ T S PG+ +E E F +L+ +GH M++P
Sbjct: 242 VWSFGVLMWEIFTLGGSPY-----PGI----------PVE----ELF-KLLKEGHRMDKP 281
Query: 983 PRILSDMLQVALRC--ILPASERPDMMSVFEELSTIV 1017
+++ + C +P S+RP + E+L I+
Sbjct: 282 ANCTNELYMMMRDCWHAVP-SQRPTFKQLVEDLDRIL 317
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 109 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 163 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 215
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 216 NWMHY-NQTVDIWSVGCIMAELLTGRT 241
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMAGFVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 85 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 139 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 191
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 192 NWMHY-NQTVDIWSVGCIMAELLTGRT 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 91 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + + +L D+ L R T D++ A YR PE
Sbjct: 145 SADII-HRDLKPSNLAVNEDSELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 197
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 198 NWMHY-NQTVDIWSVGCIMAELLTGRT 223
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild Type
Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 740 IGRSCHGTLYKATL--------DSGSILAVKRLRE-GIAKGKKEFAREVKKLGNI-KHPN 789
+G C G + A +AVK L++ K + E++ + I KH N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDP---------RKLPP--LSIDERL 838
+++L G ++ VI Y + +L YL+ P ++P ++ + +
Sbjct: 149 IINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 839 RVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL--TDYSLHRILTSAGTADQV 896
+AR + YL +++ I H +L + N+L+ T N V+ D+ L R + + +
Sbjct: 207 SCTYQLARGMEYLASQKCI-HRDLAARNVLV---TENNVMKIADFGLARDINNIDYYKKT 262
Query: 897 LNAG-ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
N + + PE + + +SDV++FG+++ E+ T S PG+
Sbjct: 263 TNGRLPVKWMAPE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY-----PGI------ 309
Query: 956 VRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPA-SERPDMMSVFEELS 1014
E +L+ +GH M++P +++ + C S+RP + E+L
Sbjct: 310 ---------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
Query: 1015 TIV 1017
I+
Sbjct: 361 RIL 363
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMAGFVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 95 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + + +L D+ L R T D++ A YR PE
Sbjct: 149 SADII-HRDLKPSNLAVNEDSELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 201
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 202 NWMHY-NQTVDIWSVGCIMAELLTGRT 227
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 147
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 148 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 206
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + R + A + A + + PPE F S K+D ++F
Sbjct: 207 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 258
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 259 GVLLWEIFS 267
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 17/210 (8%)
Query: 740 IGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFA-REVKKLGNIKHPNLVSLQGYYW 798
+GR +G +YKA G L++ G A RE+ L +KHPN++SLQ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 799 GPKEHEKLVISNYINAQSLAVY------LQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
+ + ++ +Y + P +LP + L +D ++YLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD---GIHYLH 145
Query: 853 NERAIPHGNLKSTNILL--EAPTMNAV-LTDYSLHRILTS--AGTADQVLNAGALGYRPP 907
+ H +LK NIL+ E P V + D R+ S AD YR P
Sbjct: 146 ANWVL-HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGK 937
E ++ + D++A G I ELLT +
Sbjct: 205 ELLLGARHY-TKAIDIWAIGCIFAELLTSE 233
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 755 SGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINA 814
+G + A+K +++ A E+ L IKH N+V+L+ Y H LV+
Sbjct: 33 TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-ESTTHYYLVMQLVSGG 91
Query: 815 QSLAVYLQE-TDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT 873
+ L+ K L I + V + YLH E I H +LK N+L P
Sbjct: 92 ELFDRILERGVYTEKDASLVIQQ-------VLSAVKYLH-ENGIVHRDLKPENLLYLTPE 143
Query: 874 MNA--VLTDYSLHR-----ILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAF 926
N+ ++TD+ L + I+++A G GY PE + KP S D ++
Sbjct: 144 ENSKIMITDFGLSKMEQNGIMSTA--------CGTPGYVAPEVLA-QKPY-SKAVDCWSI 193
Query: 927 GIILLELLTG 936
G+I LL G
Sbjct: 194 GVITYILLCG 203
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 108 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 162 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 214
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 215 NWMHY-NQTVDIWSVGCIMAELLTGRT 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 85 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-AGALGYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ YR PE
Sbjct: 139 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMAGFVATRWYRAPEIML 191
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 192 NWMHY-NQTVDIWSVGCIMAELLTGRT 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 112 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 166 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMXGYVATRWYRAPEIML 218
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 219 NWMHY-NQTVDIWSVGCIMAELLTGRT 244
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 23 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--SDG 80
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNERAIPHGN 861
E + +++ SL L++ I E++ +V++ V + L YL + I H +
Sbjct: 81 EISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 133
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN--AGALGYRPPEFASTSKPCPSL 919
+K +NIL+ + L D+ + S D++ N G Y PE + S+
Sbjct: 134 VKPSNILVNS-RGEIKLCDFGV-----SGQLIDEMANEFVGTRSYMSPERLQGTH--YSV 185
Query: 920 KSDVYAFGIILLELLTGK 937
+SD+++ G+ L+E+ G+
Sbjct: 186 QSDIWSMGLSLVEMAVGR 203
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 99 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 153 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 205
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 206 NWMHY-NQTVDIWSVGCIMAELLTGRT 231
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFYLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 28/192 (14%)
Query: 755 SGSILAVKRLREGIAKGKKEFAR---EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNY 811
+G A+K L++ I K+ E L + HP ++ + G + + +I +Y
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF--QDAQQIFMIMDY 87
Query: 812 INAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEA 871
I L L+++ P A +V L YLH++ I + +LK NILL
Sbjct: 88 IEGGELFSLLRKSQRFPNPVAKF-----YAAEVCLALEYLHSKDII-YRDLKPENILL-- 139
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNA-----GALGYRPPEFASTSKPCPSLKSDVYAF 926
D + H +T G A V + G Y PE ST S+ D ++F
Sbjct: 140 --------DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSI--DWWSF 189
Query: 927 GIILLELLTGKS 938
GI++ E+L G +
Sbjct: 190 GILIYEMLAGYT 201
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGXVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--SDG 77
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNERAIPHGN 861
E + +++ SL L++ I E++ +V++ V + L YL + I H +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSL 919
+K +NIL+ + L D+ + S D + N+ G Y PE + S+
Sbjct: 131 VKPSNILVNS-RGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTH--YSV 182
Query: 920 KSDVYAFGIILLELLTGK 937
+SD+++ G+ L+E+ G+
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 95 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 149 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 201
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 202 NWMHY-NQTVDIWSVGCIMAELLTGRT 227
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILIGELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--SDG 77
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNERAIPHGN 861
E + +++ SL L++ I E++ +V++ V + L YL + I H +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSL 919
+K +NIL+ + L D+ + S D + N+ G Y PE + S+
Sbjct: 131 VKPSNILVNS-RGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTH--YSV 182
Query: 920 KSDVYAFGIILLELLTGK 937
+SD+++ G+ L+E+ G+
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 94 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 148 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 200
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 201 NWMHY-NQTVDIWSVGCIMAELLTGRT 226
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALG 903
L YLH R I HG++K+ N+LL + A L D+ L G +L G
Sbjct: 177 LEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ PE KPC + K D+++ ++L +L G
Sbjct: 236 HMAPEVV-MGKPCDA-KVDIWSSCCMMLHMLNG 266
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DG 77
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNERAIPHGN 861
E + +++ SL L++ I E++ +V++ V + L YL + I H +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSL 919
+K +NIL+ + L D+ + S D + N+ G Y PE + S+
Sbjct: 131 VKPSNILVNS-RGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTH--YSV 182
Query: 920 KSDVYAFGIILLELLTGK 937
+SD+++ G+ L+E+ G+
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--SDG 77
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNERAIPHGN 861
E + +++ SL L++ I E++ +V++ V + L YL + I H +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSL 919
+K +NIL+ + L D+ + S D + N+ G Y PE + S+
Sbjct: 131 VKPSNILVNSRG-EIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTH--YSV 182
Query: 920 KSDVYAFGIILLELLTGK 937
+SD+++ G+ L+E+ G+
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 772 KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP 831
K+ REV+ L + HPN++ L ++ K + LV Y + E RK
Sbjct: 76 KESLLREVQLLKQLDHPNIMKLYEFF-EDKGYFYLVGEVYTGGE----LFDEIISRK--R 128
Query: 832 LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA--VLTDYSLH-RILT 888
S + R+ V + Y+H + I H +LK N+LLE+ + +A + D+ L
Sbjct: 129 FSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
Query: 889 SAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
S D++ G Y PE + K DV++ G+IL LL+G
Sbjct: 188 SKKMKDKI---GTAYYIAPEVLHGTY---DEKCDVWSTGVILYILLSG 229
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--SDG 77
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNERAIPHGN 861
E + +++ SL L++ I E++ +V++ V + L YL + I H +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSL 919
+K +NIL+ + L D+ + S D + N+ G Y PE + S+
Sbjct: 131 VKPSNILVNSRG-EIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTH--YSV 182
Query: 920 KSDVYAFGIILLELLTGK 937
+SD+++ G+ L+E+ G+
Sbjct: 183 QSDIWSMGLSLVEMAVGR 200
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 83 FPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHN--LFHGLIPS---GIVSLK 137
FPT+ LK L ++ ++N+ GN + SLEFLDLS N F G G SLK
Sbjct: 319 FPTL-KLKSLKRLTFTSNK-GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 138 NLMLLNISSNSFEG--TFPSGFGGLGKLKYLDLR-ANRFGGDIMHLLSQLGSVVHVDLSN 194
L L SF G T S F GL +L++LD + +N + L +++++D+S+
Sbjct: 377 YLDL------SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430
Query: 195 NQXXXXXXXXXXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNNHLVGAI 254
+ L ++ NS P D NL D S L
Sbjct: 431 TH---TRVAFNGIFNGLSSLEVLKMAGNSFQENFLP-DIFTELRNLTFLDLSQCQLEQLS 486
Query: 255 PS-FNFVFSLRILRLGSNQL 273
P+ FN + SL++L + SNQL
Sbjct: 487 PTAFNSLSSLQVLNMASNQL 506
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 6 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 65
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 112 IQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRAN 171
+++L FLDLS L P+ SL +L +LN++SN + F L L+ + L N
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
IG +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 94 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 148 SADII-HRDLKPSNLAVNEDXELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 200
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 201 NWMHY-NQTVDIWSVGCIMAELLTGRT 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 112 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 166 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 218
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 219 NWMHY-NQTVDIWSVGCIMAELLTGRT 244
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 101 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 155 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 207
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 208 NWMHY-NQTVDIWSVGCIMAELLTGRT 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 91 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 145 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 197
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 198 NWMHY-NQTVDIWSVGCIMAELLTGRT 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 101 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 155 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 207
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 208 NWMHY-NQTVDIWSVGCIMAELLTGRT 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 101 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 155 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 207
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 208 NWMHY-NQTVDIWSVGCIMAELLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 95 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 149 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 201
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 202 NWMHY-NQTVDIWSVGCIMAELLTGRT 227
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSL-HRIL----------TS 889
+ + YLH+ + I H +LK NI+L P + D+ L H+I T
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 890 AGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
A A +++N LG L++D+++ G+I LL+G S
Sbjct: 182 AFVAPEIVNYEPLG---------------LEADMWSIGVITYILLSGAS 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ + + SG +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ E+ N L +L D K L+ D + + R L Y+H
Sbjct: 118 VFTPATSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 171
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 172 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 224
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
++ D+++ G I+ ELLTG++
Sbjct: 225 NWMHY-NMTVDIWSVGCIMAELLTGRT 250
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALG 903
L YLH R I HG++K+ N+LL + A L D+ L G +L G
Sbjct: 163 LEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ PE KPC + K D+++ ++L +L G
Sbjct: 222 HMAPEVV-MGKPCDA-KVDIWSSCCMMLHMLNG 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 109 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 163 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 215
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 216 NWMHY-NQTVDIWSVGCIMAELLTGRT 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 96 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 150 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 202
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 203 NWMHY-NQTVDIWSVGCIMAELLTGRT 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 727 FTAEELSHAPAEV---------IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKK 773
F +EL+ EV +G +G++ A +G +AVK+L + I K+
Sbjct: 8 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 774 EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLP 830
+ RE++ L ++KH N++ L + + E+ N L +L D K
Sbjct: 68 TY-RELRLLKHMKHENVIGLLDVFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQ 120
Query: 831 PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSA 890
L+ D + + R L Y+H+ I H +LK +N+ + +L D+ L R
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKIL-DFGLAR----- 173
Query: 891 GTADQVLNAGAL-GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
T D++ A YR PE + D+++ G I+ ELLTG++
Sbjct: 174 HTDDEMTGYVATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 727 FTAEELSHAPAEV---------IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKK 773
F +EL+ EV +G +G++ A +G +AVK+L + I K+
Sbjct: 6 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 65
Query: 774 EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLP 830
+ RE++ L ++KH N++ L + + E+ N L +L D K
Sbjct: 66 TY-RELRLLKHMKHENVIGLLDVFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQ 118
Query: 831 PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSA 890
L+ D + + R L Y+H+ I H +LK +N+ + +L D+ L R
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKIL-DFGLAR----- 171
Query: 891 GTADQVLNAGAL-GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
T D++ A YR PE + D+++ G I+ ELLTG++
Sbjct: 172 HTDDEMTGYVATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGRT 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 727 FTAEELSHAPAEV---------IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKK 773
F +EL+ EV +G +G++ A +G +AVK+L + I K+
Sbjct: 4 FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 63
Query: 774 EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLP 830
+ RE++ L ++KH N++ L + + E+ N L +L D K
Sbjct: 64 TY-RELRLLKHMKHENVIGLLDVFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQ 116
Query: 831 PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSA 890
L+ D + + R L Y+H+ I H +LK +N+ + +L D+ L R
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADII-HRDLKPSNLAVNEDCELKIL-DFGLAR----- 169
Query: 891 GTADQVLNAGAL-GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
T D++ A YR PE + D+++ G I+ ELLTG++
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLTGRT 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 86 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 140 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 192
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 193 NWMHY-NQTVDIWSVGCIMAELLTGRT 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNLVS 792
E IG +G +YKA + G A+K++R EGI RE+ L +KH N+V
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVK 64
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L K +LV+ Q L L + + L++ +A C
Sbjct: 65 LYDVIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC----- 116
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR---ILTSAGTADQVLNAGALGYRPPEF 909
++R + H +LK N+L+ + D+ L R I T + V L YR P+
Sbjct: 117 HDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDV 171
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTG 936
SK S D+++ G I E++ G
Sbjct: 172 LMGSKKY-STTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNLVS 792
E IG +G +YKA + G A+K++R EGI RE+ L +KH N+V
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVK 64
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L K +LV+ Q L L + + L++ +A C
Sbjct: 65 LYDVIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC----- 116
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR---ILTSAGTADQVLNAGALGYRPPEF 909
++R + H +LK N+L+ + D+ L R I T + V L YR P+
Sbjct: 117 HDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDV 171
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTG 936
SK S D+++ G I E++ G
Sbjct: 172 LMGSKKY-STTIDIWSVGCIFAEMVNG 197
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 746 GTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEH 803
G ++K + SG ++A K + I + + RE++ L P +V G ++ +
Sbjct: 39 GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DG 96
Query: 804 EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLK 863
E + +++ SL L++ ++P + +V++ V + L YL + I H ++K
Sbjct: 97 EISICMEHMDGGSLDQVLKKAG--RIPEQILG---KVSIAVIKGLTYLREKHKIMHRDVK 151
Query: 864 STNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKS 921
+NIL+ + L D+ + S D + N+ G Y PE + S++S
Sbjct: 152 PSNILVNSRG-EIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGTH--YSVQS 203
Query: 922 DVYAFGIILLELLTGK 937
D+++ G+ L+E+ G+
Sbjct: 204 DIWSMGLSLVEMAVGR 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 20/185 (10%)
Query: 758 ILAVKRLREGIAKG---KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINA 814
I+A+K E ++ + RE + G ++ P++V + + G + + V IN
Sbjct: 61 IVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDF--GEIDGQLYVDXRLING 118
Query: 815 QSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLN---YLHNERAIPHGNLKSTNILLEA 871
LA L+ P PP AV + R + + H ++K NIL+ A
Sbjct: 119 VDLAAXLRRQGPLA-PPR--------AVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169
Query: 872 PTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILL 931
A L D+ + T G L Y PE S S + ++D+YA +L
Sbjct: 170 DDF-AYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHA--TYRADIYALTCVLY 226
Query: 932 ELLTG 936
E LTG
Sbjct: 227 ECLTG 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 94 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 148 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 200
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 201 NWMHY-NQTVDIWSVGCIMAELLTGRT 226
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALG 903
L YLH R I HG++K+ N+LL + A L D+ L G +L G
Sbjct: 179 LEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 237
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ PE KPC + K D+++ ++L +L G
Sbjct: 238 HMAPEVV-MGKPCDA-KVDIWSSCCMMLHMLNG 268
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 91 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 145 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 197
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 198 NWMHY-NQTVDIWSVGCIMAELLTGRT 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 88 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 142 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 194
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 195 NWMHY-NQTVDIWSVGCIMAELLTGRT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDXELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 108 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 162 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 214
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 215 NWMHY-NQTVDIWSVGCIMAELLTGRT 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 100 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 154 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 206
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 207 NWMHY-NQTVDIWSVGCIMAELLTGRT 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 100 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 154 SADII-HRDLKPSNLAVNEDXELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 206
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 207 NWMHY-NQTVDIWSVGCIMAELLTGRT 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 91 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 145 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 197
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 198 NWMHY-NQTVDIWSVGCIMAELLTGRT 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 56/311 (18%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKGKKE-FAREVKKLGNI-KHPN 789
+ +G G + +AT D+ +AVK L+ +KE E+K + ++ +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 790 LVSLQGY--YWGPKEHEKLVISNYINAQSLAVYLQ------ETDPRKL---PPLSIDERL 838
+V+L G + GP LVI+ Y L +L+ ETDP LS + L
Sbjct: 112 IVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 839 RVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN 898
+ VA+ + +L ++ I H ++ + N+LL + A + D+ L R + + ++ ++
Sbjct: 168 HFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMN--DSNYIVK 223
Query: 899 AGA---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
A + + PE S +++SDV+++GI+L E+ + + PG+
Sbjct: 224 GNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----PGI------ 270
Query: 956 VRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELS 1014
L N F +L+ DG+ M QP ++ + C L + RP F+++
Sbjct: 271 -----LVNSK---FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP----TFQQIC 318
Query: 1015 TIVLEKDSQGK 1025
+ + E+ + +
Sbjct: 319 SFLQEQAQEDR 329
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 86 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 140 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 192
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 193 NWMHY-NQTVDIWSVGCIMAELLTGRT 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 94 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 148 SADII-HRDLKPSNLAVNEDXELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 200
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 201 NWMHY-NQTVDIWSVGCIMAELLTGRT 226
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 23/189 (12%)
Query: 759 LAVKRLREGIAKGKK-EFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+AVK L E ++ + +F E + H N+V G + + ++ + L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL--QSLPRFILLELMAGGDL 121
Query: 818 AVYLQETDPRKLPP--LSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+L+ET PR P L++ + L VA D+A YL I H ++ + N LL P
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI-HRDIAARNCLLTCPGPG 180
Query: 876 AV--LTDYSLHRILTSAGTADQVLNAG-ALGYRPPE------FASTSKPCPSLKSDVYAF 926
V + D+ + + + A + A + + PPE F S K+D ++F
Sbjct: 181 RVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS--------KTDTWSF 232
Query: 927 GIILLELLT 935
G++L E+ +
Sbjct: 233 GVLLWEIFS 241
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 840 VAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA--VLTDYSLHRILTSAG------ 891
V DVA L++LHN + I H +LK NIL E P + + D+ L + G
Sbjct: 116 VVQDVASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 892 TADQVLNAGALGYRPPEFASTSKPCPSL---KSDVYAFGIILLELLTG 936
T + + G+ Y PE S+ + D+++ G+IL LL+G
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLR-----EGIAKGKKEFAREVKKLGNIKHPNLVS 792
E IG +G +YKA + G A+K++R EGI RE+ L +KH N+V
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT---IREISILKELKHSNIVK 64
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
L K +LV+ Q L L + + L++ +A C
Sbjct: 65 LYDVIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC----- 116
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHR---ILTSAGTADQVLNAGALGYRPPEF 909
++R + H +LK N+L+ + D+ L R I T + V L YR P+
Sbjct: 117 HDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDV 171
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTG 936
SK S D+++ G I E++ G
Sbjct: 172 LMGSKKY-STTIDIWSVGCIFAEMVNG 197
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 740 IGRSCHGTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYY 797
+G G ++K + SG ++A K + I + + RE++ L P +V G +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNER 855
+ + E + +++ SL L++ I E++ +V++ V + L YL +
Sbjct: 136 YS--DGEISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKH 186
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTS 913
I H ++K +NIL+ + L D+ + S D + N+ G Y PE +
Sbjct: 187 KIMHRDVKPSNILVNS-RGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGT 240
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
S++SD+++ G+ L+E+ G+
Sbjct: 241 H--YSVQSDIWSMGLSLVEMAVGR 262
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 117/292 (40%), Gaps = 52/292 (17%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 86 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H NL + N ++ A + D+ + R + G G P
Sbjct: 144 MAYL-NAKKFVHRNLAARNCMV-AHDFTVKIGDFGMTRDIYET----DYYRKGGKGLLPV 197
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + + P +
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQP-------------YQGL 237
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALRCILPASERPDMMSVFEEL 1013
S E + +MDG ++QP P ++D++++ + P+M F E+
Sbjct: 238 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQF------NPNMRPTFLEI 283
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 95 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D+ L R T D++ A YR PE
Sbjct: 149 SADII-HRDLKPSNLAVNEDCELKIL-DFGLAR-----HTDDEMTGYVATRWYRAPEIML 201
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 202 NWMHY-NQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 748 LYKAT-LDSGSILAVKRLREGIAKGKKEFAREV---KKLGNIKHPNLVSLQGYYWGPKEH 803
+Y+A + SG A+KRL + + +EV KKL HPN+V KE
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSG--HPNIVQFCSAASIGKEE 101
Query: 804 ------EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER-A 856
E L+++ Q L +L++ + R PLS D L++ R + ++H ++
Sbjct: 102 SDTGQAEFLLLTELCKGQ-LVEFLKKMESRG--PLSCDTVLKIFYQTCRAVQHMHRQKPP 158
Query: 857 IPHGNLKSTNILLE-----------APTMNAVLTDYSLHRILTSAGTADQVLNAGALGYR 905
I H +LK N+LL + T + DYS A +++ YR
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS-AQRRALVEEEITRNTTPMYR 217
Query: 906 PPEFASTSKPCP-SLKSDVYAFGIIL 930
PE P K D++A G IL
Sbjct: 218 TPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 840 VAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA--VLTDYSLHRILTSAG------ 891
V DVA L++LHN + I H +LK NIL E P + + D+ L + G
Sbjct: 116 VVQDVASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 892 TADQVLNAGALGYRPPEFASTSKPCPSL---KSDVYAFGIILLELLTG 936
T + + G+ Y PE S+ + D+++ G+IL LL+G
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 62 REVRIMKVLNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+A MN + D+ T D
Sbjct: 118 KFR-----QIVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLD 170
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
G+ Y PE F P + DV++ G+IL L++G
Sbjct: 171 TF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 62 REVRIMKVLNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+A MN + D+ T D
Sbjct: 118 KFR-----QIVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLD 170
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
G+ Y PE F P + DV++ G+IL L++G
Sbjct: 171 TF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 62 REVRIMKVLNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+A MN + D+ T D
Sbjct: 118 KFR-----QIVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLD 170
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
G+ Y PE F P + DV++ G+IL L++G
Sbjct: 171 TF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 740 IGRSCHGTLYKATLD-SGSILAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYY 797
+G G ++K + SG ++A K + I + + RE++ L P +V G +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHNER 855
+ + E + +++ SL L++ I E++ +V++ V + L YL +
Sbjct: 101 YS--DGEISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYLREKH 151
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA--GALGYRPPEFASTS 913
I H ++K +NIL+ + L D+ + S D + N+ G Y PE +
Sbjct: 152 KIMHRDVKPSNILVNS-RGEIKLCDFGV-----SGQLIDSMANSFVGTRSYMSPERLQGT 205
Query: 914 KPCPSLKSDVYAFGIILLELLTGK 937
S++SD+++ G+ L+E+ G+
Sbjct: 206 H--YSVQSDIWSMGLSLVEMAVGR 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin
Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 117/292 (40%), Gaps = 52/292 (17%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 85 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H NL + N ++ A + D+ + R + G G P
Sbjct: 143 MAYL-NAKKFVHRNLAARNCMV-AHDFTVKIGDFGMTRDIYET----DYYRKGGKGLLPV 196
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + + P +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQP-------------YQGL 236
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALRCILPASERPDMMSVFEEL 1013
S E + +MDG ++QP P ++D++++ + P+M F E+
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQF------NPNMRPTFLEI 282
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRL------REGIAKGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y A S I+A+K L +EG+ + + RE++ ++ HPN++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV---EHQLRREIEIQAHLHHPNILR 87
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNY 850
L Y++ + +I Y L LQ++ + DE+ + ++A L Y
Sbjct: 88 LYNYFYDRR--RIYLILEYAPRGELYKELQKS-------CTFDEQRTATIMEELADALMY 138
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLT-DYSLHRILTSAGTADQVLNAGALGYRPPEF 909
H ++ I H ++K N+LL + +S+H A + + G L Y PPE
Sbjct: 139 CHGKKVI-HRDIKPENLLLGLKGELKIADFGWSVH-----APSLRRKTMCGTLDYLPPEM 192
Query: 910 ASTSKPCPSLKSDVYAFGIILLELLTG 936
+ K D++ G++ ELL G
Sbjct: 193 IEGR--MHNEKVDLWCIGVLCYELLVG 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 55 REVRIMKVLNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA 110
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+A MN + D+ T D
Sbjct: 111 KFR-----QIVSAVQYCH-QKFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLD 163
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
G+ Y PE F P + DV++ G+IL L++G
Sbjct: 164 TF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 202
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + + +L D+ L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDSELKIL-DFGLCR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 14 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 68
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 69 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 121
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 122 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 178
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 179 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 31/220 (14%)
Query: 804 EKLVISNYINAQSLAVYLQETDPRKL--PPLSIDERLRVAVDVARCLNYLHNERAIPHGN 861
E S + +SL+ +E D P+++++ + + VAR + +L + + I H +
Sbjct: 166 ESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCI-HRD 224
Query: 862 LKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA---LGYRPPEFASTSKPCPS 918
L + NILL + + D+ L R + D V L + PE S S
Sbjct: 225 LAARNILLSENNVVKI-CDFGLARDIYK--NPDYVRKGDTRLPLKWMAPE--SIFDKIYS 279
Query: 919 LKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHD 978
KSDV+++G++L E+ + S PGV + E F + +G
Sbjct: 280 TKSDVWSYGVLLWEIFSLGGSPY-----PGV--------------QMDEDFCSRLREGMR 320
Query: 979 MEQPPRILSDMLQVALRCI-LPASERPDMMSVFEELSTIV 1017
M P ++ Q+ L C ERP + E+L ++
Sbjct: 321 MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YLHN R I H +LK N+ L M+ + D+ L + G + L G Y P
Sbjct: 155 VQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKTL-CGTPNYIAP 211
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
E K S + D+++ G IL LL GK E C+
Sbjct: 212 EV--LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
EVIG + A +A+KR+ E E +E++ + HPN+VS
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS--- 77
Query: 796 YY--WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYL 851
YY + K+ LV+ L + + +DE + +V L YL
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAG--TADQVLN--AGALGYRPP 907
H I H ++K+ NILL + + D+ + L + G T ++V G + P
Sbjct: 138 HKNGQI-HRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
E + K+D+++FGI +EL TG +
Sbjct: 196 EVMEQVRGY-DFKADIWSFGITAIELATGAA 225
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGKFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 39/210 (18%)
Query: 751 ATLDSGSI-LAVKRLREGIAKGK-----------KEFAREVKKLGNIKHPNLVSLQG--- 795
A +DS I +A+KR+ ++ G+ K RE++ L + HPN++ L+
Sbjct: 40 AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY----- 850
++ P H+ +++ L TD L + D+R+ ++ + Y
Sbjct: 100 HFEEPAMHKLYLVTE----------LMRTD---LAQVIHDQRIVISPQHIQYFMYHILLG 146
Query: 851 LH--NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
LH +E + H +L NILL A + + D++L R A++ YR PE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILL-ADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K L D+++ G ++ E+ K+
Sbjct: 204 LVMQFKGFTKL-VDMWSAGCVMAEMFNRKA 232
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 739 VIGRSCHGTLYKATLD-SGSILAVKRLREGIAKGKKEFA----REVKKLGNIKHPNLVSL 793
++G +G + AT +G I+A+K++ K FA RE+K L + KH N++++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITI 74
Query: 794 QGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKL---PPLSIDERLRVAVDVARCLNY 850
P E N + L +TD ++ LS D R +
Sbjct: 75 FNIQ-RPDSFENF------NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRIL------TSAGTADQ---VLNAGA 901
LH I H +LK +N+L+ + + + D+ L RI+ S T Q V
Sbjct: 128 LHGSNVI-HRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 902 LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
YR PE TS S DV++ G IL EL +
Sbjct: 186 RWYRAPEVMLTSAKY-SRAMDVWSCGCILAELFLRR 220
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 39/210 (18%)
Query: 751 ATLDSGSI-LAVKRLREGIAKGK-----------KEFAREVKKLGNIKHPNLVSLQG--- 795
A +DS I +A+KR+ ++ G+ K RE++ L + HPN++ L+
Sbjct: 40 AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY----- 850
++ P H+ +++ L TD L + D+R+ ++ + Y
Sbjct: 100 HFEEPAMHKLYLVTE----------LMRTD---LAQVIHDQRIVISPQHIQYFMYHILLG 146
Query: 851 LH--NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
LH +E + H +L NILL A + + D++L R A++ YR PE
Sbjct: 147 LHVLHEAGVVHRDLHPGNILL-ADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKS 938
K L D+++ G ++ E+ K+
Sbjct: 204 LVMQFKGFTKL-VDMWSAGCVMAEMFNRKA 232
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 717 DLHLFDVSLMFTAE--ELSHAPA-------EVIGRSCHGTLYKAT-LDSGSILAVKRLRE 766
D ++FD+ + + E+ H E +G G +++ T +G+ A K +
Sbjct: 133 DNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192
Query: 767 GIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDP 826
K+ +E++ + ++HP LV+L + ++E ++I +++ L + +
Sbjct: 193 PHESDKETVRKEIQTMSVLRHPTLVNLHDAF--EDDNEMVMIYEFMSGGELFEKVADEHN 250
Query: 827 RKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHR 885
+ +S DE + V + L ++H + H +LK NI+ N + L D+ L
Sbjct: 251 K----MSEDEAVEYMRQVCKGLCHMHENNYV-HLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 886 ILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
L + + G + PE A KP +D+++ G++ LL+G S
Sbjct: 306 HLDPKQSVK--VTTGTAEFAAPEVAE-GKPV-GYYTDMWSVGVLSYILLSGLS 354
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 762 KRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYL 821
K R G+++ ++ REV L I+HPN+++L Y + + ++I + L +L
Sbjct: 50 KSSRRGVSR--EDIEREVSILKEIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFL 105
Query: 822 QETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVL 878
E + L+ +E + + YLH+ + I H +LK NI+L P +
Sbjct: 106 AEKE-----SLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 879 TDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
D+ L + + G + PE + +P L++D+++ G+I LL+G S
Sbjct: 160 IDFGLAHKIDFGNEFKNIF--GTPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
EVIG + A +A+KR+ E E +E++ + HPN+VS
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS--- 72
Query: 796 YY--WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAV--DVARCLNYL 851
YY + K+ LV+ L + + +DE + +V L YL
Sbjct: 73 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAG--TADQVLN--AGALGYRPP 907
H I H ++K+ NILL + + D+ + L + G T ++V G + P
Sbjct: 133 HKNGQI-HRDVKAGNILL-GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
E + K+D+++FGI +EL TG +
Sbjct: 191 EVMEQVRGY-DFKADIWSFGITAIELATGAA 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 51/267 (19%)
Query: 759 LAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K L++G K +E RE + + + +P +V L G A++L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV---------------CQAEAL 410
Query: 818 AVYLQETDPRKLPPLSIDERLRVAV--------DVARCLNYLHNERAIPHGNLKSTNILL 869
+ ++ L + +R + V V+ + YL E+ H NL + N+LL
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL-EEKNFVHRNLAARNVLL 469
Query: 870 EAPTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFG 927
A ++D+ L + L + + +AG L + PE + K S +SDV+++G
Sbjct: 470 -VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF--SSRSDVWSYG 526
Query: 928 IILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILS 987
+ + E L+ P V+ I G ME PP
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMA--------------------FIEQGKRMECPPECPP 566
Query: 988 DMLQVALRC-ILPASERPDMMSVFEEL 1013
++ + C I +RPD ++V + +
Sbjct: 567 ELYALMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 14 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 68
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 69 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 121
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 122 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 178
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 179 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YLHN R I H +LK N+ L M+ + D+ L + G + L G Y P
Sbjct: 155 VQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKXL-CGTPNYIAP 211
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
E K S + D+++ G IL LL GK E C+
Sbjct: 212 EV--LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L + H N+++L Y + ++I ++ L +L +
Sbjct: 54 RRGVSR--EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ LS +E + +NYLH ++ I H +LK NI+L P + L D+
Sbjct: 110 E-----SLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 882 SL-HRILTSAGTADQVLNAGALGYRPPEFASTS----KPCPSLKSDVYAFGIILLELLTG 936
L H I D V G PEF + +P L++D+++ G+I LL+G
Sbjct: 164 GLAHEI------EDGVEFKNIFG--TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSG 214
Query: 937 KS 938
S
Sbjct: 215 AS 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L + H N+++L Y + ++I ++ L +L +
Sbjct: 54 RRGVSR--EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ LS +E + +NYLH ++ I H +LK NI+L P + L D+
Sbjct: 110 E-----SLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 882 SL-HRILTSAGTADQVLNAGALGYRPPEFASTS----KPCPSLKSDVYAFGIILLELLTG 936
L H I D V G PEF + +P L++D+++ G+I LL+G
Sbjct: 164 GLAHEI------EDGVEFKNIFG--TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSG 214
Query: 937 KS 938
S
Sbjct: 215 AS 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 22/231 (9%)
Query: 717 DLHLFDVSLMFTAE--ELSHAPA-------EVIGRSCHGTLYKAT-LDSGSILAVKRLRE 766
D ++FD+ + + E+ H E +G G +++ T +G+ A K +
Sbjct: 27 DNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 86
Query: 767 GIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDP 826
K+ +E++ + ++HP LV+L + ++E ++I +++ L + +
Sbjct: 87 PHESDKETVRKEIQTMSVLRHPTLVNLHDAF--EDDNEMVMIYEFMSGGELFEKVADEHN 144
Query: 827 RKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHR 885
+ +S DE + V + L ++H + H +LK NI+ N + L D+ L
Sbjct: 145 K----MSEDEAVEYMRQVCKGLCHMHENNYV-HLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 886 ILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
L + + G + PE A KP +D+++ G++ LL+G
Sbjct: 200 HLDPKQSVK--VTTGTAEFAAPEVAE-GKPV-GYYTDMWSVGVLSYILLSG 246
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 24/218 (11%)
Query: 728 TAEELSHAPAEVIGRSCH----GTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLG 783
T EEL V+ + C G Y A K R G+++ ++ REV L
Sbjct: 15 TGEELGSGQFAVV-KKCREKSTGLQYAAKFIKKR--RTKSSRRGVSR--EDIEREVSILK 69
Query: 784 NIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVD 843
I+HPN+++L Y + + ++I + L +L E + L+ +E
Sbjct: 70 EIQHPNVITLHEVY--ENKTDVILILELVAGGELFDFLAEKE-----SLTEEEATEFLKQ 122
Query: 844 VARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ + YLH+ + I H +LK NI+L P + D+ L + + G
Sbjct: 123 ILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--G 179
Query: 901 ALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
+ PE + +P L++D+++ G+I LL+G S
Sbjct: 180 TPEFVAPEIVNY-EPL-GLEADMWSIGVITYILLSGAS 215
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 27/191 (14%)
Query: 755 SGSILAVKRLREGIAKGKKE-FAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYIN 813
+G + AVK + + KGK+ E+ L IKH N+V+L+ Y P H LV+
Sbjct: 46 TGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPN-HLYLVMQLVSG 104
Query: 814 AQSL-----AVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
+ + E D L +R +D + YLH I H +LK N+L
Sbjct: 105 GELFDRIVEKGFYTEKDASTL--------IRQVLDA---VYYLH-RMGIVHRDLKPENLL 152
Query: 869 LEAPTMNA--VLTDYSLHRILTSAGTADQVLNA-GALGYRPPEFASTSKPCPSLKSDVYA 925
+ + +++D+ L ++ G D + A G GY PE + KP S D ++
Sbjct: 153 YYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLA-QKPY-SKAVDCWS 207
Query: 926 FGIILLELLTG 936
G+I LL G
Sbjct: 208 IGVIAYILLCG 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L + H N+++L Y + ++I ++ L +L +
Sbjct: 54 RRGVSR--EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ LS +E + +NYLH ++ I H +LK NI+L P + L D+
Sbjct: 110 E-----SLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 882 SL-HRILTSAGTADQVLNAGALGYRPPEFASTS----KPCPSLKSDVYAFGIILLELLTG 936
L H I D V G PEF + +P L++D+++ G+I LL+G
Sbjct: 164 GLAHEI------EDGVEFKNIFG--TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSG 214
Query: 937 KS 938
S
Sbjct: 215 AS 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 88/222 (39%), Gaps = 36/222 (16%)
Query: 738 EVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFARE--VKKLGNIKHPNLVSL-- 793
E+IGR +G +YK +LD + AVK ++ F E + ++ ++H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDERPV-AVKVFS---FANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 794 -QGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLH 852
E L++ Y SL YL L R+A V R L YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLS------LHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 853 NER--------AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILT-----SAGTADQ--VL 897
E AI H +L S N+L++ V++D+ L LT G D +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDG-TCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 898 NAGALGYRPPEFASTSKPCPSLKS-----DVYAFGIILLELL 934
G + Y PE + +S D+YA G+I E+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%)
Query: 765 REGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQET 824
R G+++ +E REV L + H N+++L Y + ++I ++ L +L +
Sbjct: 54 RRGVSR--EEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVSGGELFDFLAQK 109
Query: 825 DPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILL---EAPTMNAVLTDY 881
+ LS +E + +NYLH ++ I H +LK NI+L P + L D+
Sbjct: 110 E-----SLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDF 163
Query: 882 SL-HRILTSAGTADQVLNAGALGYRPPEFASTS----KPCPSLKSDVYAFGIILLELLTG 936
L H I D V G PEF + +P L++D+++ G+I LL+G
Sbjct: 164 GLAHEI------EDGVEFKNIFG--TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSG 214
Query: 937 KS 938
S
Sbjct: 215 AS 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 739 VIGRSCHGTLYKA-TLDSGSILAVKRLREGIAKG--KKEFAREVKKLGNIKHPNLVSLQG 795
++G +G + K D+G I+A+K+ E KK RE+K L ++H NLV+L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERL--RVAVDVARCLNYLHN 853
K+ ++ +++ L D +L P +D ++ + + + + H+
Sbjct: 92 VC--KKKKRWYLVFEFVDHTIL-------DDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 854 ERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTA--DQVLNAGALGYRPPE-FA 910
I H ++K NIL+ + L D+ R L + G D+V YR PE
Sbjct: 143 HNII-HRDIKPENILVSQSGV-VKLCDFGFARTLAAPGEVYDDEV---ATRWYRAPELLV 197
Query: 911 STSKPCPSLKSDVYAFGIILLELLTGK 937
K ++ DV+A G ++ E+ G+
Sbjct: 198 GDVKYGKAV--DVWAIGCLVTEMFMGE 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 849 NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
YLH R I H +LK N+ L + + D+ L + G +VL G Y PE
Sbjct: 155 QYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPE 211
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
SK S + DV++ G I+ LL GK E C+
Sbjct: 212 V--LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain
Of Csf-1r
Length = 324
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 139/320 (43%), Gaps = 65/320 (20%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKGKKE-FAREVKKLGNI-KHPN 789
+ +G G + +AT D+ +AVK L+ +KE E+K + ++ +H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 790 LVSLQGY--YWGPKEHEKLVISNYINAQSLAVYLQET-------------DPRKLP---- 830
+V+L G + GP LVI+ Y L +L+ DP L
Sbjct: 97 IVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 831 -PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTS 889
PL + + L + VA+ + +L ++ I H ++ + N+LL + A + D+ L R + +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMN 210
Query: 890 AGTADQVLNAGA---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVD 946
++ ++ A + + PE S +++SDV+++GI+L E+ +
Sbjct: 211 --DSNYIVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS----------- 255
Query: 947 PGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPD 1005
+ L + +L F +L+ DG+ M QP ++ + C L + RP
Sbjct: 256 ---LGLNPYPGILVNSK-----FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP- 306
Query: 1006 MMSVFEELSTIVLEKDSQGK 1025
F+++ + + E+ + +
Sbjct: 307 ---TFQQICSFLQEQAQEDR 323
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In Complex
With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The Insulin
Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex
With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 116/292 (39%), Gaps = 52/292 (17%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 85 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H +L + N ++ A + D+ + R + + G G P
Sbjct: 143 MAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPV 196
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--------------------PYQGL 236
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALRCILPASERPDMMSVFEEL 1013
S E + +MDG ++QP P ++D++++ + P+M F E+
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQF------NPNMRPTFLEI 282
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEK--LVISNYINAQSLAVYLQETDPRKLPPLSI 834
REV+ + + HPN+V L + E EK ++ Y + + YL K
Sbjct: 63 REVRIMKILNHPNIVKL----FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 835 DERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTAD 894
R + + Y H ++ I H +LK+ N+LL+ MN + D+ T D
Sbjct: 119 KFR-----QIVSAVQYCH-QKYIVHRDLKAENLLLDG-DMNIKIADFGFSNEFTVGNKLD 171
Query: 895 QVLNAGALGYRPPE-FASTSKPCPSLKSDVYAFGIILLELLTG 936
G+ Y PE F P + DV++ G+IL L++G
Sbjct: 172 TF--CGSPPYAAPELFQGKKYDGPEV--DVWSLGVILYTLVSG 210
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YLHN R I H +LK N+ L M+ + D+ L + G + L G Y P
Sbjct: 139 VQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAP 195
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
E K S + D+++ G IL LL GK E C+
Sbjct: 196 EV--LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 849 NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
YLH R I H +LK N+ L + + D+ L + G +VL G Y PE
Sbjct: 153 QYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPE 209
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
SK S + DV++ G I+ LL GK E C+
Sbjct: 210 V--LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 244
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 112/274 (40%), Gaps = 46/274 (16%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 82 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H +L + N ++ A + D+ + R + + G G P
Sbjct: 140 MAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPV 193
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + + P +
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQP-------------YQGL 233
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALR 995
S E + +MDG ++QP P ++D++++ +
Sbjct: 234 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 36/196 (18%)
Query: 755 SGSILAVKRL--REGIAKGKKE-FAREVKKLGNIKHPNLVSL------QGYYWGPKEHEK 805
+G AVK + R+ K KE REV+ L + HPN+ L +GY++
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFY------- 102
Query: 806 LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
LV Y + E RK S + R+ V + Y H + I H +LK
Sbjct: 103 LVGEVYTGGE----LFDEIISRK--RFSEVDAARIIRQVLSGITYXHKNK-IVHRDLKPE 155
Query: 866 NILLEAPTMNA--VLTDYSLH-RILTSAGTADQVLNAGALGYRPPEF--ASTSKPCPSLK 920
N+LLE+ + +A + D+ L S D++ G Y PE + + C
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI---GTAYYIAPEVLHGTYDEKC---- 208
Query: 921 SDVYAFGIILLELLTG 936
DV++ G+IL LL+G
Sbjct: 209 -DVWSTGVILYILLSG 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An Arylamide
Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 139/317 (43%), Gaps = 66/317 (20%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKGKKE-FAREVKKLGNI-KHPN 789
+ +G G + +AT D+ +AVK L+ +KE E+K + ++ +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 790 LVSLQGY--YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP---------------L 832
+V+L G + GP LVI+ Y L +L+ RK PP L
Sbjct: 112 IVNLLGACTHGGPV----LVITEYCCYGDLLNFLR----RKRPPGLEYSYNPSHNPEEQL 163
Query: 833 SIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGT 892
S + L + VA+ + +L ++ I H ++ + N+LL + A + D+ L R + +
Sbjct: 164 SSRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMN--D 219
Query: 893 ADQVLNAGA---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGV 949
++ ++ A + + PE S +++SDV+++GI+L E+ +
Sbjct: 220 SNYIVKGNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFS-------------- 263
Query: 950 VDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMS 1008
+ L + +L F +L+ DG+ M QP ++ + C L + RP
Sbjct: 264 LGLNPYPGILV-----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP---- 314
Query: 1009 VFEELSTIVLEKDSQGK 1025
F+++ + + E+ + +
Sbjct: 315 TFQQICSFLQEQAQEDR 331
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 739 VIGRSCHGTLYKATLD-SGSILAVKRLREGIAKGKKEFA----REVKKLGNIKHPNLVSL 793
++G +G + AT +G I+A+K++ K FA RE+K L + KH N++++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITI 74
Query: 794 QGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKL---PPLSIDERLRVAVDVARCLNY 850
P E N + L +TD ++ LS D R +
Sbjct: 75 FNIQ-RPDSFENF------NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALG------- 903
LH I H +LK +N+L+ + + + D+ L RI+ + + G
Sbjct: 128 LHGSNVI-HRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 904 --YRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
YR PE TS S DV++ G IL EL
Sbjct: 186 RWYRAPEVMLTSAKY-SRAMDVWSCGCILAELF 217
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 85 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H +L + N ++ A + D+ + R + + G G P
Sbjct: 143 MAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPV 196
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--------------------PYQGL 236
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALR 995
S E + +MDG ++QP P ++D++++ +
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 270
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 849 NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
YLH R I H +LK N+ L + + D+ L + G +VL G Y PE
Sbjct: 129 QYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPE 185
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
SK S + DV++ G I+ LL GK E C+
Sbjct: 186 V--LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 739 VIGRSCHGTLYKATLD-SGSILAVKRLREGIAKGKKEFA----REVKKLGNIKHPNLVSL 793
++G +G + AT +G I+A+K++ K FA RE+K L + KH N++++
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITI 74
Query: 794 QGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKL---PPLSIDERLRVAVDVARCLNY 850
P E N + L +TD ++ LS D R +
Sbjct: 75 FNIQ-RPDSFENF------NEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALG------- 903
LH I H +LK +N+L+ + + + D+ L RI+ + + G
Sbjct: 128 LHGSNVI-HRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 904 --YRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
YR PE TS S DV++ G IL EL
Sbjct: 186 RWYRAPEVMLTSAKY-SRAMDVWSCGCILAELF 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 843 DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL 902
++ + L+YLH+ER I H ++K+ N+LL + + L D+ + LT G
Sbjct: 124 EILKGLDYLHSERKI-HRDIKAANVLL-SEQGDVKLADFGVAGQLTDTQIKRNXF-VGTP 180
Query: 903 GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
+ PE S K+D+++ GI +EL G+
Sbjct: 181 FWMAPEVIKQS--AYDFKADIWSLGITAIELAKGE 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YLHN R I H +LK N+ L M+ + D+ L + G + L G Y P
Sbjct: 155 VQYLHNNRVI-HRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAP 211
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
E K S + D+++ G IL LL GK E C+
Sbjct: 212 EV--LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 740 IGRSCHGTLYKATLD-SGSILAVKRLREGIAKGKKEFA-REVKKLGNIKHPNLVSLQGYY 797
+G + T+YK + +++A+K +R +G A REV L ++KH N+V+L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 798 WGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAI 857
E ++ Y++ + L YL + +++ + R L Y H ++ +
Sbjct: 70 --HTEKSLTLVFEYLD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 858 PHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCP 917
H +LK N+L+ L D+ L R S T L YRPP+ S
Sbjct: 123 -HRDLKPQNLLINERG-ELKLADFGLARA-KSIPTKTYDNEVVTLWYRPPDILLGSTDY- 178
Query: 918 SLKSDVYAFGIILLELLTGK 937
S + D++ G I E+ TG+
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDE 836
EV L + HPN++ L ++ K + LV+ Y + + ++ I +
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFF-EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL--TDYSLHRILTSAGTAD 894
++ V YLH I H +LK N+LLE+ +A++ D+ L + +
Sbjct: 144 QVLSGV------TYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196
Query: 895 QVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ L G Y PE + K DV++ G+IL LL G
Sbjct: 197 ERL--GTAYYIAPEVL---RKKYDEKCDVWSIGVILFILLAG 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 111/274 (40%), Gaps = 46/274 (16%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 85 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H +L + N ++ A + D+ + R + G G P
Sbjct: 143 MAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIYETA----YYRKGGKGLLPV 196
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + + P +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQP-------------YQGL 236
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALR 995
S E + +MDG ++QP P ++D++++ +
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 270
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 111 SIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRA 170
+++ L+ L+L++N + + L NL +LN+S N + S F GL K+ Y+DL+
Sbjct: 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347
Query: 171 NRFG 174
N
Sbjct: 348 NHIA 351
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%)
Query: 114 SLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRF 173
S+ LDLSH L +LK+L +LN++ N F GL L+ L+L N
Sbjct: 267 SVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326
Query: 174 GGDIMHLLSQLGSVVHVDLSNNQ 196
G L V ++DL N
Sbjct: 327 GELYSSNFYGLPKVAYIDLQKNH 349
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DRGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.9 bits (89), Expect = 0.016, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 749 YKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL 806
Y T D +G ++AVK L+ + + + + +E+ L + H +++ +G
Sbjct: 52 YDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTN 866
++ Y+ SL YL PR + + + L A + + YLH + I H +L + N
Sbjct: 112 LVMEYVPLGSLRDYL----PRH--SIGLAQLLLFAQQICEGMAYLHAQHYI-HRDLAARN 164
Query: 867 ILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG--ALGYRPPEFASTSKPCPSLKSDVY 924
+LL+ + + D+ L + + +V G + + PE K SDV+
Sbjct: 165 VLLDNDRL-VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKF--YYASDVW 221
Query: 925 AFGIILLELLTGKSSGE 941
+FG+ L ELLT S +
Sbjct: 222 SFGVTLYELLTHCDSSQ 238
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 84 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 136
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRIL--TSAGTADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 137 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 195 SLKTR--TFSHASDTWMFGVTLWEMFT 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DAGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide
Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 56/311 (18%)
Query: 738 EVIGRSCHGTLYKATL------DSGSILAVKRLREGIAKGKKE-FAREVKKLGNI-KHPN 789
+ +G G + +AT D+ +AVK L+ +KE E+K + ++ +H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 790 LVSLQGY--YWGPKEHEKLVISNYINAQSLAVYLQ------ETDPRKL---PPLSIDERL 838
+V+L G + GP LVI+ Y L +L+ ETDP S + L
Sbjct: 112 IVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 839 RVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN 898
+ VA+ + +L ++ I H ++ + N+LL + A + D+ L R + + ++ ++
Sbjct: 168 HFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHV-AKIGDFGLARDIMN--DSNYIVK 223
Query: 899 AGA---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDW 955
A + + PE S +++SDV+++GI+L E+ + + PG+
Sbjct: 224 GNARLPVKWMAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-----PGI------ 270
Query: 956 VRLLALENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRC-ILPASERPDMMSVFEELS 1014
L N F +L+ DG+ M QP ++ + C L + RP F+++
Sbjct: 271 -----LVNSK---FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP----TFQQIC 318
Query: 1015 TIVLEKDSQGK 1025
+ + E+ + +
Sbjct: 319 SFLQEQAQEDR 329
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 74 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 126
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRIL--TSAGTADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 127 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 185 SLKTR--TFSHASDTWMFGVTLWEMFT 209
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 109/274 (39%), Gaps = 46/274 (16%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 85 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H +L + N ++ A + D+ + R + G G P
Sbjct: 143 MAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIYET----DYYRKGGKGLLPV 196
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ--------------------PYQGL 236
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALR 995
S E + +MDG ++QP P ++D++++ +
Sbjct: 237 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 270
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 84 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 136
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGT--ADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 137 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 195 SLKTR--TFSHASDTWMFGVTLWEMFT 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGIAKGKKEFAREVKK--LGNIKHPNLV 791
+V+G+ G ++ SGS + A+K L++ K + ++++ L + HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L +Y E + +I +++ L L +++ D + +A ++A L++L
Sbjct: 91 KL--HYAFQTEGKLYLILDFLRGGDLFTRLS----KEVMFTEEDVKFYLA-ELALALDHL 143
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPP 907
H+ I + +LK NILL+ + LTD+ L S + D A G + Y P
Sbjct: 144 HS-LGIIYRDLKPENILLDEEG-HIKLTDFGL-----SKESIDHEKKAYSFCGTVEYMAP 196
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTG 936
E + S +D ++FG+++ E+LTG
Sbjct: 197 EVVNRRGHTQS--ADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGIAKGKKEFAREVKK--LGNIKHPNLV 791
+V+G+ G ++ SGS + A+K L++ K + ++++ L + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L +Y E + +I +++ L L +++ D + +A ++A L++L
Sbjct: 90 KL--HYAFQTEGKLYLILDFLRGGDLFTRLS----KEVMFTEEDVKFYLA-ELALALDHL 142
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPP 907
H+ I + +LK NILL+ + LTD+ L S + D A G + Y P
Sbjct: 143 HS-LGIIYRDLKPENILLDEEG-HIKLTDFGL-----SKESIDHEKKAYSFCGTVEYMAP 195
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTG 936
E + S +D ++FG+++ E+LTG
Sbjct: 196 EVVNRRGHTQS--ADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.5 bits (88), Expect = 0.022, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGIAKGKKEFAREVKK--LGNIKHPNLV 791
+V+G+ G ++ SGS + A+K L++ K + ++++ L + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 792 SLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYL 851
L +Y E + +I +++ L L +++ D + +A ++A L++L
Sbjct: 90 KL--HYAFQTEGKLYLILDFLRGGDLFTRLS----KEVMFTEEDVKFYLA-ELALALDHL 142
Query: 852 HNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALGYRPP 907
H+ I + +LK NILL+ + LTD+ L S + D A G + Y P
Sbjct: 143 HS-LGIIYRDLKPENILLDEEG-HIKLTDFGL-----SKESIDHEKKAYSFCGTVEYMAP 195
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTG 936
E + S +D ++FG+++ E+LTG
Sbjct: 196 EVVNRRGHTQS--ADWWSFGVLMFEMLTG 222
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 62/224 (27%)
Query: 83 FPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHN------------------- 123
FPT+ LK L ++ ++N+ GN + SLEFLDLS N
Sbjct: 343 FPTL-KLKSLKRLTFTSNK-GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLK 400
Query: 124 ----LFHGLIP---------------------------SGIVSLKNLMLLNISSNSFEGT 152
F+G+I S +SL+NL+ L+IS
Sbjct: 401 YLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 460
Query: 153 FPSGFGGLGKLKYLDLRANRFGGDIM-HLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXX 211
F F GL L+ L + N F + + + ++L ++ +DLS Q
Sbjct: 461 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ---LEQLSPTAFNSL 517
Query: 212 XXXQYLNISENSLVGELFPHDGMPY--FDNLEVFDASNNHLVGA 253
Q LN+S N+ F D PY ++L+V D S NH++ +
Sbjct: 518 SSLQVLNMSHNN----FFSLDTFPYKCLNSLQVLDYSLNHIMTS 557
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 30 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 89
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 149
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 150 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 78 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 130
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGT--ADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 131 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 189 SLKTR--TFSHASDTWMFGVTLWEMFT 213
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNNQ 196
+ L+NNQ
Sbjct: 151 EKLSLANNQ 159
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN +L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDG 502
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKG 190
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 74 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 126
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGT--ADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 127 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 185 SLKTR--TFSHASDTWMFGVTLWEMFT 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 111/274 (40%), Gaps = 46/274 (16%)
Query: 740 IGRSCHGTLYKATL------DSGSILAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y+ ++ + +AVK + E + + + EF E + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 793 LQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRK-----LPPLSIDERLRVAVDVARC 847
L G K LV+ + L YL+ P PP ++ E +++A ++A
Sbjct: 84 LLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPP 907
+ YL N + H +L + N ++ A + D+ + R + G G P
Sbjct: 142 MAYL-NAKKFVHRDLAARNCMV-AHDFTVKIGDFGMTRDIYET----DYYRKGGKGLLPV 195
Query: 908 EF---ASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENR 964
+ S + SD+++FG++L E+ + + P +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------LAEQP-------------YQGL 235
Query: 965 SGECFDRLIMDGHDMEQP---PRILSDMLQVALR 995
S E + +MDG ++QP P ++D++++ +
Sbjct: 236 SNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 269
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNNQ 196
+ L+NNQ
Sbjct: 151 EKLSLANNQ 159
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN +L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDGL 503
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKGF 191
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNNQ 196
+ L+NNQ
Sbjct: 151 EKLSLANNQ 159
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN +L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDGL 503
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKGF 191
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 78 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 130
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRIL--TSAGTADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 131 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 189 SLKTR--TFSHASDTWMFGVTLWEMFT 213
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L D L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKIL-DGGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 738 EVIGRSCHGTLYKATLDSGS----ILAVKRLREGI---AKGKKEFAREVKKLGNIKHPNL 790
E +G G + + D+ S +AVK L+ + + +F REV + ++ H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 791 VSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ L G P +++ SL L++ L + R AV VA + Y
Sbjct: 74 IRLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFL----LGTLSRYAVQVAEGMGY 126
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRIL--TSAGTADQVLNAGALGYRPPE 908
L ++R I H +L + N+LL + + D+ L R L Q + PE
Sbjct: 127 LESKRFI-HRDLAARNLLLATRDLVKI-GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLT 935
T S SD + FG+ L E+ T
Sbjct: 185 SLKTR--TFSHASDTWMFGVTLWEMFT 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 773 KEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPL 832
++ +E+ L + HPN+V L P E ++ +N + + L PL
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV------MEVPTLKPL 134
Query: 833 SIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGT 892
S D+ D+ + + YLH ++ I H ++K +N+L+ + + D+ +
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKII-HRDIKPSNLLV-GEDGHIKIADFGVSNEFKG--- 189
Query: 893 ADQVLN--AGALGYRPPEFASTSKPCPSLKS-DVYAFGIILLELLTGK 937
+D +L+ G + PE S ++ S K+ DV+A G+ L + G+
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 33/227 (14%)
Query: 739 VIGRSCHGTLYKA--TLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
V+G+ G + KA LDS A+K++R K + EV L ++ H +V Y
Sbjct: 13 VLGQGAFGQVVKARNALDS-RYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR---Y 67
Query: 797 YWGPKEHEKLV--ISNYINAQSLAVYLQETDPRKLPPL--------SIDERLRVAVDVAR 846
Y E V ++ +L + ++ + R L L DE R+ +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 847 CLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSL----HRILTSA--------GTAD 894
L+Y+H++ I H +LK NI ++ + N + D+ L HR L G++D
Sbjct: 128 ALSYIHSQ-GIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 895 QVLNA-GALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSG 940
+ +A G Y E + K D+Y+ GII E++ S+G
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNE-KIDMYSLGIIFFEMIYPFSTG 231
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 738 EVIGRSCHGTLYKA-TLDSGSILAVKRLREGIAKGKKEFA-REVKKLGNIKHPNLVSLQG 795
E +G + T+YK +G +A+K ++ +G A RE+ + +KH N+V L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL-- 68
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPP-LSIDERLRVAVDVARCLNYLHNE 854
Y KL + L Y+ P L ++ + + L + H E
Sbjct: 69 -YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-E 126
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHR---ILTSAGTADQVLNAGALGYRPPEFAS 911
I H +LK N+L+ L D+ L R I + +++ V L YR P+
Sbjct: 127 NKILHRDLKPQNLLINK-RGQLKLGDFGLARAFGIPVNTFSSEVV----TLWYRAPDVLM 181
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGK 937
S+ S D+++ G IL E++TGK
Sbjct: 182 GSRTY-STSIDIWSCGCILAEMITGK 206
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNNQ 196
+ L+NNQ
Sbjct: 151 EKLSLANNQ 159
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN +L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRQLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDG 502
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKG 190
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 43/213 (20%)
Query: 740 IGRSCHGTLYKATLD-SGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
+GR +Y+ + A+K L++ + KK E+ L + HPN++ L+ +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 799 GPKE-------------HEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVA 845
P E +++V Y + + A +++ +
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ--------------------IL 158
Query: 846 RCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL--TDYSLHRILTSAGTADQVLNAGALG 903
+ YLH E I H +LK N+L P +A L D+ L +I+ V G G
Sbjct: 159 EAVAYLH-ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV--CGTPG 215
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
Y PE P + D+++ GII LL G
Sbjct: 216 YCAPEILRGCAYGPEV--DMWSVGIITYILLCG 246
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 62/224 (27%)
Query: 83 FPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHN------------------- 123
FPT+ LK L ++ ++N+ GN + SLEFLDLS N
Sbjct: 319 FPTL-KLKSLKRLTFTSNK-GGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLK 376
Query: 124 ----LFHGLIP---------------------------SGIVSLKNLMLLNISSNSFEGT 152
F+G+I S +SL+NL+ L+IS
Sbjct: 377 YLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 436
Query: 153 FPSGFGGLGKLKYLDLRANRFGGDIM-HLLSQLGSVVHVDLSNNQXXXXXXXXXXXXXXX 211
F F GL L+ L + N F + + + ++L ++ +DLS Q
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ---LEQLSPTAFNSL 493
Query: 212 XXXQYLNISENSLVGELFPHDGMPY--FDNLEVFDASNNHLVGA 253
Q LN+S N+ F D PY ++L+V D S NH++ +
Sbjct: 494 SSLQVLNMSHNN----FFSLDTFPYKCLNSLQVLDYSLNHIMTS 533
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 6 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 65
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 740 IGRSCHGTLYKA-TLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
+G +G++ A +G +AVK+L + I K+ + RE++ L ++KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPR---KLPPLSIDERLRVAVDVARCLNYLH 852
+ + E+ N L +L D K L+ D + + R L Y+H
Sbjct: 89 VFTPARSLEEF------NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 853 NERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL-GYRPPEFAS 911
+ I H +LK +N+ + +L + L R T D++ A YR PE
Sbjct: 143 SADII-HRDLKPSNLAVNEDCELKILG-FGLAR-----HTDDEMTGYVATRWYRAPEIML 195
Query: 912 TSKPCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ ELLTG++
Sbjct: 196 NWMHY-NQTVDIWSVGCIMAELLTGRT 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 849 NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
YLH R I H +LK N+ L + + D+ L + G + L G Y PE
Sbjct: 131 QYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPE 187
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
SK S + DV++ G I+ LL GK E C+
Sbjct: 188 V--LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 849 NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
YLH R I H +LK N+ L + + D+ L + G + L G Y PE
Sbjct: 131 QYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPE 187
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
SK S + DV++ G I+ LL GK E C+
Sbjct: 188 V--LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 849 NYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPE 908
YLH R I H +LK N+ L + + D+ L + G + L G Y PE
Sbjct: 135 QYLHRNRVI-HRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPE 191
Query: 909 FASTSKPCPSLKSDVYAFGIILLELLTGKSSGEIVCV 945
SK S + DV++ G I+ LL GK E C+
Sbjct: 192 V--LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 15/202 (7%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
E IG+ G ++K + + ++A+K + E ++ +E+ L P + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
Y K+ + +I Y+ S L +P L I LR ++ + L+YLH+E+
Sbjct: 93 SYL--KDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR---EILKGLDYLHSEK 144
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
I H ++K+ N+LL + L D+ + LT G + PE S
Sbjct: 145 KI-HRDIKAANVLL-SEHGEVKLADFGVAGQLTDTQIKRNTF-VGTPFWMAPEVIKQS-- 199
Query: 916 CPSLKSDVYAFGIILLELLTGK 937
K+D+++ GI +EL G+
Sbjct: 200 AYDSKADIWSLGITAIELARGE 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATLD-SGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT +G +AVK++ + ++ EV + + H N+V + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V R L+YLHN+ I
Sbjct: 113 VGDE--LWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSYLHNQGVI- 163
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL + L+D+ ++ + L G + PE S+
Sbjct: 164 HRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXL-VGTPYWMAPEV--ISRLPYG 219
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 220 TEVDIWSLGIMVIEMIDGE 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 754 DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW--GPKEHEKLVISNY 811
D +A+K++ + K RE+K + + H N+V + G + + +
Sbjct: 34 DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93
Query: 812 INAQSLAVYLQETDPRKL----PPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+N+ + ETD + P L RL + R L Y+H+ + H +LK N+
Sbjct: 94 LNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIHSANVL-HRDLKPANL 151
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALG--YRPPEFASTSKPCPSLKS-DVY 924
+ + + D+ L RI+ + L+ G + YR P + P K+ D++
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS--PNNYTKAIDMW 209
Query: 925 AFGIILLELLTGKS 938
A G I E+LTGK+
Sbjct: 210 AAGCIFAEMLTGKT 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 843 DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGAL 902
++ + L+YLH+E+ I H ++K+ N+LL + + L D+ + LT G
Sbjct: 128 EILKGLDYLHSEKKI-HRDIKAANVLL-SEQGDVKLADFGVAGQLTDTQIKRNTF-VGTP 184
Query: 903 GYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGK 937
+ PE S K+D+++ GI +EL G+
Sbjct: 185 FWMAPEVIQQS--AYDSKADIWSLGITAIELAKGE 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.4 bits (85), Expect = 0.046, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 51/267 (19%)
Query: 759 LAVKRLREGIAKG-KKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K L++G K +E RE + + + +P +V L G A++L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV---------------CQAEAL 84
Query: 818 AVYLQETDPRKLPPLSIDERLRVAVD--------VARCLNYLHNERAIPHGNLKSTNILL 869
+ ++ L + +R + V V+ + YL E+ H +L + N+LL
Sbjct: 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLAARNVLL 143
Query: 870 EAPTMNAVLTDYSLHRILTSAGTADQVLNAGA--LGYRPPEFASTSKPCPSLKSDVYAFG 927
A ++D+ L + L + + +AG L + PE + K S +SDV+++G
Sbjct: 144 -VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF--SSRSDVWSYG 200
Query: 928 IILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRSGECFDRLIMDGHDMEQPPRILS 987
+ + E L+ P V+ I G ME PP
Sbjct: 201 VTMWEALSYGQKPYKKMKGPEVM--------------------AFIEQGKRMECPPECPP 240
Query: 988 DMLQVALRC-ILPASERPDMMSVFEEL 1013
++ + C I +RPD ++V + +
Sbjct: 241 ELYALMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 771 GKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLP 830
G+ +E++ L ++H N++ L + ++ + ++ Y + L ++ P
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVC-GMQEMLDSVPEKRFP 107
Query: 831 PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP---TMNAVLTDYSLHRIL 887
+D L YLH++ I H ++K N+LL ++A+ +LH
Sbjct: 108 VCQAHGYFCQLID---GLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF- 162
Query: 888 TSAGTADQVLNA--GALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
AD G+ ++PPE A+ K D+++ G+ L + TG
Sbjct: 163 ----AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 808 ISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+ Y+N L ++Q+ K P + + A +++ L +LH +R I + +LK N+
Sbjct: 98 VMEYVNGGDLMYHIQQVGKFKEP-----QAVFYAAEISIGLFFLH-KRGIIYRDLKLDNV 151
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKS-DVYAF 926
+L++ + + D+ + + G + G Y PE + P KS D +A+
Sbjct: 152 MLDSEG-HIKIADFGMCKEHMMDGVTTREF-CGTPDYIAPEIIAYQ---PYGKSVDWWAY 206
Query: 927 GIILLELLTGK 937
G++L E+L G+
Sbjct: 207 GVLLYEMLAGQ 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 21/151 (13%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE-------RAIPH 859
+I++Y SL YL+ T L L++A L +LH E AI H
Sbjct: 112 LITDYHENGSLYDYLKSTT------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLNA--GALGYRPPEFASTSKPC 916
+LKS NIL++ + D L + ++ D N G Y PPE S
Sbjct: 166 RDLKSKNILVKK-NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR 224
Query: 917 PSLKS----DVYAFGIILLELLTGKSSGEIV 943
+S D+Y+FG+IL E+ SG IV
Sbjct: 225 NHFQSYIMADMYSFGLILWEVARRCVSGGIV 255
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 109 IGSIQSLEFLDLSHNLFHGLIPSGI--VSLKNLMLLNISSNSFE---------------G 151
+G+ + ++ D+S +F GL + ++L+ NISSN+F
Sbjct: 232 LGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS 291
Query: 152 TFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSVVHVDLSNN 195
PSG GL LK L L AN+F S S+ H+ + N
Sbjct: 292 ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGN 335
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.0 bits (84), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 15/161 (9%)
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
EV L + HPN++ L ++ K + LV+ Y + + ++ I ++
Sbjct: 54 EVAVLKQLDHPNIMKLYEFF-EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 112
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL--TDYSLHRILTSAGTADQ 895
V YLH I H +LK N+LLE+ + +A++ D+ L G +
Sbjct: 113 ------VLSGTTYLHKHN-IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 165
Query: 896 VLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
L G Y PE + K DV++ G+IL LL G
Sbjct: 166 RL--GTAYYIAPEVL---RKKYDEKCDVWSCGVILYILLCG 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
E IG+ G ++K + + ++A+K + E ++ +E+ L P + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
Y K+ + +I Y+ S A+ L E P L I LR ++ + L+YLH+E+
Sbjct: 73 SYL--KDTKLWIIMEYLGGGS-ALDLLEPGP--LDETQIATILR---EILKGLDYLHSEK 124
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
I H ++K+ N+LL + L D+ + LT G + PE S
Sbjct: 125 KI-HRDIKAANVLL-SEHGEVKLADFGVAGQLTDTQIKRNTF-VGTPFWMAPEVIKQS-- 179
Query: 916 CPSLKSDVYAFGIILLELLTGK 937
K+D+++ GI +EL G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 309 ATLKKVNLSSNKLSGSLPARVGH----CTIVDLSNNRL----SGDLSRMQNWGNYVEDIH 360
A KK++L SNKLS SLP++ H ++ L++N+L +G ++N +E +
Sbjct: 37 ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKN----LETLW 91
Query: 361 LSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLP 420
++ N L + Q + L ++ N L+ P V + +L + L N L
Sbjct: 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG 151
Query: 421 SFFTSTKLTDLNLSGNNFS 439
F T L +L L N
Sbjct: 152 VFDKLTSLKELRLYNNQLK 170
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 111 SIQSLEFLDLSHNLFHGLIPSGIV-SLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLR 169
+++LE L ++ N L P G+ L NL L + N + P F L KL YL L
Sbjct: 83 ELKNLETLWVTDNKLQAL-PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG 141
Query: 170 ANRFGGDIMHLLSQLGSVVHVDLSNNQ 196
N + +L S+ + L NNQ
Sbjct: 142 YNELQSLPKGVFDKLTSLKELRLYNNQ 168
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 94 NVSVSNNQLMGNITDIGS---IQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFE 150
N+S++NNQL+ S +L LDLS+N H + L +L L++ N+ +
Sbjct: 226 NLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQ 285
Query: 151 GTFPSGFGGLGKLKYLDLR 169
P F GL L+YL L+
Sbjct: 286 RLSPRSFYGLSNLRYLSLK 304
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 359 IHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFL 418
++L+ N L + P +++ +L NS+ P + P LKV++L N L+
Sbjct: 30 LNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQIS 89
Query: 419 LPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSG 473
+F T LT+L+L N+ + +I++NP +L LDL++N LS
Sbjct: 90 DQTFVFCTNLTELDLMSNS------IHKIKSNPFKNQK---NLIKLDLSHNGLSS 135
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLREG--IAKGKKEFAREVKKLGNIKHPNLVSLQ 794
E IG +G + A +G +A+K++ + K RE+K L + KH N+++++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 795 GYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKL----PPLSIDERLRVAVDVARCLNY 850
V + + + L E+D ++ PL+++ + R L Y
Sbjct: 121 DIL------RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALG---YRPP 907
+H+ + I H +LK +N+L+ + D+ + R L ++ Q + YR P
Sbjct: 175 MHSAQVI-HRDLKPSNLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
E + + D+++ G I E+L +
Sbjct: 233 ELMLSLHEY-TQAIDLWSVGCIFGEMLARRQ 262
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 8 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQ 67
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 68 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 127
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 128 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 7 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQ 66
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 67 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 126
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 127 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALG 903
L YLH+ R I HG++K+ N+LL + +A L D+ L G +L G
Sbjct: 198 LEYLHSRR-ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ PE + C + K DV++ ++L +L G
Sbjct: 257 HMAPEVV-LGRSCDA-KVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNA----GALG 903
L YLH+ R I HG++K+ N+LL + +A L D+ L G +L G
Sbjct: 179 LEYLHSRR-ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ PE + C + K DV++ ++L +L G
Sbjct: 238 HMAPEVV-LGRSCDA-KVDVWSSCCMMLHMLNG 268
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT+ SG ++AVK++ + ++ EV + + +H N+V + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V + L+ LH + I
Sbjct: 92 --VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI- 142
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL L+D+ ++ + L G + PE S P
Sbjct: 143 HRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPE 200
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 201 V--DIWSLGIMVIEMVDGE 217
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL------TDYSLHRILTSAGTAD 894
+++ + LNYL + ++ H +LK NILL+ P L TD +I + T
Sbjct: 143 CIEILKALNYL-RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 895 QVLNAGALG--------------YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
++++ G YR PE + SD+++FG +L EL TG
Sbjct: 202 KLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGW--DVSSDMWSFGCVLAELYTG 255
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 25/212 (11%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPN 789
EEL V+ R H T + I+ K+L A+ ++ RE + ++HPN
Sbjct: 12 EELGKGAFSVVRRCVHKT--TGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPN 66
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLN 849
+V L +E ++ + + L ++ R+ S + + +
Sbjct: 67 IVRLHDSI--QEESFHYLVFDLVTGGEL---FEDIVAREF--YSEADASHCIQQILESIA 119
Query: 850 YLHNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALGYRPP 907
Y H+ I H NLK N+LL + A L D+ L + + AG GY P
Sbjct: 120 YCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSP 176
Query: 908 EFAST---SKPCPSLKSDVYAFGIILLELLTG 936
E SKP D++A G+IL LL G
Sbjct: 177 EVLKKDPYSKPV-----DIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 25/212 (11%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPN 789
EEL V+ R H T + I+ K+L A+ ++ RE + ++HPN
Sbjct: 11 EELGKGAFSVVRRCVHKT--TGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPN 65
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLN 849
+V L +E ++ + + L ++ R+ S + + +
Sbjct: 66 IVRLHDSI--QEESFHYLVFDLVTGGEL---FEDIVAREF--YSEADASHCIQQILESIA 118
Query: 850 YLHNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALGYRPP 907
Y H+ I H NLK N+LL + A L D+ L + + AG GY P
Sbjct: 119 YCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSP 175
Query: 908 EFAST---SKPCPSLKSDVYAFGIILLELLTG 936
E SKP D++A G+IL LL G
Sbjct: 176 EVLKKDPYSKPV-----DIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 25/212 (11%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPN 789
EEL V+ R H T + I+ K+L A+ ++ RE + ++HPN
Sbjct: 12 EELGKGAFSVVRRCVHKT--TGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPN 66
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLN 849
+V L +E ++ + + L ++ R+ S + + +
Sbjct: 67 IVRLHDSI--QEESFHYLVFDLVTGGEL---FEDIVAREF--YSEADASHCIQQILESIA 119
Query: 850 YLHNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALGYRPP 907
Y H+ I H NLK N+LL + A L D+ L + + AG GY P
Sbjct: 120 YCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSP 176
Query: 908 EFAST---SKPCPSLKSDVYAFGIILLELLTG 936
E SKP D++A G+IL LL G
Sbjct: 177 EVLKKDPYSKPV-----DIWACGVILYILLVG 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLREG--IAKGKKEFAREVKKLGNIKHPNLVSLQ 794
E IG +G + A +G +A+K++ + K RE+K L + KH N+++++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 795 GYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKL----PPLSIDERLRVAVDVARCLNY 850
V + + + L E+D ++ PL+++ + R L Y
Sbjct: 120 DIL------RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALG---YRPP 907
+H+ + I H +LK +N+L+ + D+ + R L ++ Q + YR P
Sbjct: 174 MHSAQVI-HRDLKPSNLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 908 EFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
E + + D+++ G I E+L +
Sbjct: 232 ELMLSLHEY-TQAIDLWSVGCIFGEMLARRQ 261
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 36.2 bits (82), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
E IG+ G ++K + + ++A+K + E ++ +E+ L P + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
Y K+ + +I Y+ S A+ L E P L I LR ++ + L+YLH+E+
Sbjct: 88 SYL--KDTKLWIIMEYLGGGS-ALDLLEPGP--LDETQIATILR---EILKGLDYLHSEK 139
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
I H ++K+ N+LL + L D+ + LT G + PE S
Sbjct: 140 KI-HRDIKAANVLL-SEHGEVKLADFGVAGQLTDTQIKRNXF-VGTPFWMAPEVIKQS-- 194
Query: 916 CPSLKSDVYAFGIILLELLTGK 937
K+D+++ GI +EL G+
Sbjct: 195 AYDSKADIWSLGITAIELARGE 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 738 EVIGRSCHGTLYKATLD-SGSILAVKRLR-EGIAKGKKEFAREVKKLGNIKHPNLVSLQG 795
E IG+ G ++K + + ++A+K + E ++ +E+ L P + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 796 YYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER 855
Y K+ + +I Y+ S A+ L E P L I LR ++ + L+YLH+E+
Sbjct: 73 SYL--KDTKLWIIMEYLGGGS-ALDLLEPGP--LDETQIATILR---EILKGLDYLHSEK 124
Query: 856 AIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKP 915
I H ++K+ N+LL + L D+ + LT G + PE S
Sbjct: 125 KI-HRDIKAANVLL-SEHGEVKLADFGVAGQLTDTQIKRNXF-VGTPFWMAPEVIKQS-- 179
Query: 916 CPSLKSDVYAFGIILLELLTGK 937
K+D+++ GI +EL G+
Sbjct: 180 AYDSKADIWSLGITAIELARGE 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 41/239 (17%)
Query: 797 YWGPKEHEK------LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
YWG H+K +I + + +Y E + ++ ++ L++++ + L Y
Sbjct: 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIY--EANAKRFSRKTV---LQLSLRILDILEY 167
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQV------LNAGALG 903
+H + HG++K++N+LL + V L DY L G + + G +
Sbjct: 168 IHEHEYV-HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTI- 225
Query: 904 YRPPEFASTSKP---CPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLA 960
EF S PS + D+ G +++ LTG E DP V +
Sbjct: 226 ----EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYREN 281
Query: 961 LENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIVLE 1019
+ + +CF + +P I M V L L +E+P ++E L I+L+
Sbjct: 282 IASLMDKCFP-------EKNKPGEIAKYMETVKL---LDYTEKP----LYENLRDILLQ 326
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase 1(Vrk1)
Length = 368
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 41/239 (17%)
Query: 797 YWGPKEHEK------LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
YWG H+K +I + + +Y E + ++ ++ L++++ + L Y
Sbjct: 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIY--EANAKRFSRKTV---LQLSLRILDILEY 167
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQV------LNAGALG 903
+H + HG++K++N+LL + V L DY L G + + G +
Sbjct: 168 IHEHEYV-HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTI- 225
Query: 904 YRPPEFASTSKP---CPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLA 960
EF S PS + D+ G +++ LTG E DP V +
Sbjct: 226 ----EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYREN 281
Query: 961 LENRSGECFDRLIMDGHDMEQPPRILSDMLQVALRCILPASERPDMMSVFEELSTIVLE 1019
+ + +CF + +P I M V L L +E+P ++E L I+L+
Sbjct: 282 IASLMDKCFP-------EKNKPGEIAKYMETVKL---LDYTEKP----LYENLRDILLQ 326
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT+ SG ++AVK++ + ++ EV + + +H N+V + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V + L+ LH + I
Sbjct: 88 --VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI- 138
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL L+D+ ++ + L G + PE S P
Sbjct: 139 HRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPE 196
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 197 V--DIWSLGIMVIEMVDGE 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT+ SG ++AVK++ + ++ EV + + +H N+V + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V + L+ LH + I
Sbjct: 99 --VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI- 149
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL L+D+ ++ + L G + PE S P
Sbjct: 150 HRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPE 207
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 208 V--DIWSLGIMVIEMVDGE 224
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 113 QSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFP--SGFGGLGKLKYLDLRA 170
Q LE+LD+SHN + + SL++ L++S N F+ P FG L KL +L L A
Sbjct: 100 QDLEYLDVSHNRLQNISCCPMASLRH---LDLSFNDFD-VLPVCKEFGNLTKLTFLGLSA 155
Query: 171 NRF 173
+F
Sbjct: 156 AKF 158
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 6 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 65
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 126 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNN 195
+ L+NN
Sbjct: 151 EKLSLANN 158
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRAELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N+L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDGL 503
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKGF 191
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT+ SG ++AVK++ + ++ EV + + +H N+V + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V + L+ LH + I
Sbjct: 142 --VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI- 192
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL L+D+ ++ + L G + PE S P
Sbjct: 193 HRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPE 250
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 251 V--DIWSLGIMVIEMVDGE 267
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNN 195
+ L+NN
Sbjct: 151 EKLSLANN 158
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRAELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N+L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDG 502
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKG 190
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 735 APAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNI--KHPNLVS 792
A E +G+ +G +++ L G +AVK ++ ++ + RE + + +H N++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILG 66
Query: 793 LQGYYWGPKEH--EKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
+ + +I++Y SL +LQ P L+ LR+AV A L +
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLE--PHLA----LRLAVSAACGLAH 120
Query: 851 LHNE-------RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN---AG 900
LH E AI H + KS N+L+++ + + D L + + + N G
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKS-NLQCCIADLGLAVMHSQGSDYLDIGNNPRVG 179
Query: 901 ALGYRPPEFASTSKPCPSLKS----DVYAFGIILLEL 933
Y PE +S D++AFG++L E+
Sbjct: 180 TKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNN 195
+ L+NN
Sbjct: 151 EKLSLANN 158
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRAELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N+L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDG 502
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKG 190
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 25/212 (11%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPN 789
EEL V+ R H T + I+ K+L A+ ++ RE + ++HPN
Sbjct: 35 EELGKGAFSVVRRCVHKTT--GLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPN 89
Query: 790 LVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLN 849
+V L +E ++ + + L ++ R+ S + + +
Sbjct: 90 IVRLHDSI--QEESFHYLVFDLVTGGEL---FEDIVAREF--YSEADASHCIQQILESIA 142
Query: 850 YLHNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALGYRPP 907
Y H+ I H NLK N+LL + A L D+ L + + AG GY P
Sbjct: 143 YCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSP 199
Query: 908 EFAST---SKPCPSLKSDVYAFGIILLELLTG 936
E SKP D++A G+IL LL G
Sbjct: 200 EVLKKDPYSKPV-----DIWACGVILYILLVG 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 24/199 (12%)
Query: 768 IAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPR 827
I K +E E+ L ++ HPN++ L + K++ LV Y + +
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVF-EDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 828 KLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPT--MNAVLTDYSLHR 885
+ +I +++ + C + HN I H ++K NILLE +N + D+ L
Sbjct: 145 ECDAANIMKQILSGI----CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
Query: 886 ILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT------GKSS 939
+ L G Y PE K + K DV++ G+I+ LL G++
Sbjct: 198 FFSKDYKLRDRL--GTAYYIAPE---VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND 252
Query: 940 GEIV-CVDPG--VVDLTDW 955
+I+ V+ G D DW
Sbjct: 253 QDIIKKVEKGKYYFDFNDW 271
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT+ SG ++AVK++ + ++ EV + + +H N+V + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V + L+ LH + I
Sbjct: 97 --VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI- 147
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL L+D+ ++ + L G + PE S P
Sbjct: 148 HRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPE 205
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 206 V--DIWSLGIMVIEMVDGE 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 778 EVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDER 837
EV L + HPN++ L ++ K + LV+ Y + E R+ S +
Sbjct: 71 EVAVLKQLDHPNIMKLYEFF-EDKRNYYLVMEVYRGGE----LFDEIILRQ--KFSEVDA 123
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVL--TDYSLHRILTSAGTADQ 895
+ V YLH I H +LK N+LLE+ + +A++ D+ L G +
Sbjct: 124 AVIMKQVLSGTTYLHKHN-IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
Query: 896 VLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
L G Y PE K DV++ G+IL LL G
Sbjct: 183 RL--GTAYYIAPEVLRKKY---DEKCDVWSCGVILYILLCG 218
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNN 195
+ L+NN
Sbjct: 151 EKLSLANN 158
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 16/204 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRDLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDGL 503
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKGF 191
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 34 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 92
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 93 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 151
Query: 188 VHVDLSNN 195
+ L+NN
Sbjct: 152 EKLSLANN 159
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN L+ P TI+ LS N L + L+ + + + +
Sbjct: 3 PICEVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 61
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 62 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 118
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N+L+ +
Sbjct: 119 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 169
Query: 480 SKFHNLVYLNLSNNKFEGSIPDG 502
+ NL L L N +IP G
Sbjct: 170 NGLENLDTLLLQENSLY-TIPKG 191
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 808 ISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+ Y+N L ++Q+ K P + A ++A L +L + + I + +LK N+
Sbjct: 99 VMEYVNGGDLMYHIQQVGRFKEP-----HAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNV 152
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKS-DVYAF 926
+L++ + + D+ + + G + G Y PE + P KS D +AF
Sbjct: 153 MLDSEG-HIKIADFGMCKENIWDGVTTKXF-CGTPDYIAPEIIAYQ---PYGKSVDWWAF 207
Query: 927 GIILLELLTGKSSGE 941
G++L E+L G++ E
Sbjct: 208 GVLLYEMLAGQAPFE 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.17, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 109
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 110 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 167
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + + G G P + S SLK SDV++
Sbjct: 168 DFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 219
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 220 FGVVLWEIAT 229
>pdb|4GLP|A Chain A, The Crystal Structure Of Soluble Human Cd14 Reveals A Bent
Solenoid With A Hydrophobic Amino-terminal Pocket
Length = 310
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 54/140 (38%), Gaps = 24/140 (17%)
Query: 402 PELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSG---------PLPLQEIQN--- 449
P LKV+ ++ H F LT L+LS N G P IQN
Sbjct: 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLAL 204
Query: 450 -----NPSTGSTQNLSLT-----SLDLAYNSLSGRLLPGISKFHNLVYLNLSNNKFEG-- 497
TG L+ SLDL++NSL + P + LN N F G
Sbjct: 205 RNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE 264
Query: 498 SIPDGLPNGLKEFNVSFNNL 517
+P GLP L+ ++S N L
Sbjct: 265 QVPKGLPAKLRVLDLSSNRL 284
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 112 IQSLEFLDLSHNLFH-GLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRA 170
+ SLE L ++ N F +P L+NL L++S E P+ F L L+ L++
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 171 NRF 173
N F
Sbjct: 209 NNF 211
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 112 IQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEG--TFPSGFGGLGKLKYLDLR 169
+++L FLDLS L P+ SL +L +LN+S N+F TFP + L L+ LD
Sbjct: 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP--YKCLNSLQVLDYS 231
Query: 170 ANR 172
N
Sbjct: 232 LNH 234
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 302 PVGSITSATLKKVNLSSNKLSGSLPA----RVGHCTIVDLSNNRLS--GDLSRMQNWGNY 355
P G +SAT ++ L SNKL SLP ++ T + LS+N LS G S+
Sbjct: 23 PTGIPSSAT--RLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 356 VEDIHLSSNFLTGMVPNQTSQFLRLTS-----FKVSNNSLEGDLPAVLGTYPELKVIDLS 410
++ + LS N + M +S FL L F+ SN + L + L +D+S
Sbjct: 80 LKYLDLSFNGVITM----SSNFLGLEQLEHLDFQHSNLKQMSEFSVFL-SLRNLIYLDIS 134
Query: 411 LNHLNGFLLPSFFTSTKLTDLNLSGNNFSG---PLPLQEIQNNPSTGSTQNLSLTSLDLA 467
H F + L L ++GN+F P E++N LT LDL+
Sbjct: 135 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN-----------LTFLDLS 183
Query: 468 YNSLSGRLLPGISKFHNLVYLNLSNNKFEG--SIPDGLPNGLKEFNVSFNNLSGVVPENL 525
L + +L LN+S+N F + P N L+ + S N++ + L
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243
Query: 526 RNFPDS 531
++FP S
Sbjct: 244 QHFPSS 249
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q + L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 8 VVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 67
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 68 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLASLENFPIGHLKT 127
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 128 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.19, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 100
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 101 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 158
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + + G G P + S SLK SDV++
Sbjct: 159 DFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 210
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 211 FGVVLWEIAT 220
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 68 TSIMLNDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHG 127
T+I+ L+ FS T++ L +++ +L D G++ L LDLSHN
Sbjct: 33 TTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVD-GTLPVLGTLDLSHNQLQS 91
Query: 128 LIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSV 187
L P +L L +L++S N GLG+L+ L L+ N LL+ +
Sbjct: 92 L-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKL 150
Query: 188 VHVDLSNN 195
+ L+NN
Sbjct: 151 EKLSLANN 158
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 302 PVGSITS-ATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRL-SGDLSRMQNWGNYVEDI 359
P+ ++ A+ +VN L+ P TI+ LS N L + L+ + + + +
Sbjct: 2 PICEVSKVASHLEVNCDKRDLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQ-L 60
Query: 360 HLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLL 419
+L LT + + T L + +S+N L+ LP + T P L V+D+S N L L
Sbjct: 61 NLDRCELTKLQVDGTLPVL--GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117
Query: 420 PSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ +L +L L GN E++ P T L L LA N+L+ +
Sbjct: 118 GALRGLGELQELYLKGN---------ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 168
Query: 480 SKFHNLVYLNLSNNKFEGSIPDG 502
+ NL L L N +IP G
Sbjct: 169 NGLENLDTLLLQENSLY-TIPKG 190
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 74 DMGLVGNFSFPTIIGLKMLCNV---SVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIP 130
D + N ++ G++ L NV ++ N+L +I+ + + +L +L L+ N L P
Sbjct: 44 DQIIANNSDIKSVQGIQYLPNVRYLALGGNKLH-DISALKELTNLTYLILTGNQLQSL-P 101
Query: 131 SGIV-SLKNLMLLNISSNSFEGTFPSG-FGGLGKLKYLDLRANRFGGDIMHLLSQLGSVV 188
+G+ L NL L + N + + P G F L L YL+L N+ + +L ++
Sbjct: 102 NGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160
Query: 189 HVDLSNNQ 196
+DLS NQ
Sbjct: 161 ELDLSYNQ 168
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 376 QFLRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSG 435
+ LT ++ N L+ V LK + L N L F T LT LNL+
Sbjct: 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAH 142
Query: 436 NNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLSNNKF 495
N ++Q+ P + +LT LDL+YN L K L L L N+
Sbjct: 143 N---------QLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193
Query: 496 EGSIPDGL 503
+ S+PDG+
Sbjct: 194 K-SVPDGV 200
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 385 VSNNSLEGDLPAVLGTY--PELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPL 442
++NNS D+ +V G P ++ + L N L+ + + T LT L L+GN
Sbjct: 47 IANNS---DIKSVQGIQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGN------ 95
Query: 443 PLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLSNNKFEGSIPDG 502
++Q+ P+ + +L L L N L K NL YLNL++N+ + S+P G
Sbjct: 96 ---QLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKG 151
Query: 503 LPN---GLKEFNVSFNNLSGVVPE 523
+ + L E ++S+N L +PE
Sbjct: 152 VFDKLTNLTELDLSYNQLQS-LPE 174
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 808 ISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNI 867
+ Y+N L ++Q+ K P + A ++A L +L + + I + +LK N+
Sbjct: 420 VMEYVNGGDLMYHIQQVGRFKEP-----HAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNV 473
Query: 868 LLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKS-DVYAF 926
+L++ + + D+ + + G + G Y PE + P KS D +AF
Sbjct: 474 MLDSEG-HIKIADFGMCKENIWDGVTTKXF-CGTPDYIAPEIIAYQ---PYGKSVDWWAF 528
Query: 927 GIILLELLTGKSSGE 941
G++L E+L G++ E
Sbjct: 529 GVLLYEMLAGQAPFE 543
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 740 IGRSCHGTLYKATL-DSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYW 798
IG G + AT+ SG ++AVK++ + ++ EV + + +H N+V + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 799 GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIP 858
E V+ ++ +L + T ++ ++ V + V + L+ LH + I
Sbjct: 219 --VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI- 269
Query: 859 HGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPS 918
H ++KS +ILL L+D+ ++ + L G + PE S P
Sbjct: 270 HRDIKSDSILLTH-DGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPE 327
Query: 919 LKSDVYAFGIILLELLTGK 937
+ D+++ GI+++E++ G+
Sbjct: 328 V--DIWSLGIMVIEMVDGE 344
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
Query: 838 LRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSLHRILTSAGTADQV 896
L++ + + L Y+H + HG++K+ N+LL + V L DY L G Q
Sbjct: 154 LQLGIRMLDVLEYIHENEYV-HGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY 212
Query: 897 LNAGALGYRPP-EFASTSKP---CPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVV 950
G+ EF S S +SDV G +L L GK E DP V
Sbjct: 213 QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 108
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 109 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 166
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 167 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 218
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 219 FGVVLWEIAT 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 723 VSLMFTAEELSHAPAEVIGRSCHGTLYKAT-LDSGSILAVKR-LREGIAKGKKEFA-REV 779
V F E + IG+ G ++KA +G +A+K+ L E +G A RE+
Sbjct: 9 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 780 KKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQ----ETD-----PRKLP 830
K L +KH N+V+L E + S Y N ++YL E D L
Sbjct: 69 KILQLLKHENVVNLI-------EICRTKASPY-NRCKASIYLVFDFCEHDLAGLLSNVLV 120
Query: 831 PLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILT 888
++ E RV + L Y+H + I H ++K+ N+L+ T + V L D+ L R +
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLI---TRDGVLKLADFGLARAFS 176
Query: 889 SAGTA--DQVLN-AGALGYRPPEFASTSKPC-PSLKSDVYAFGIILLELLT 935
A + ++ N L YRPPE + P + D++ G I+ E+ T
Sbjct: 177 LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPI--DLWGAGCIMAEMWT 225
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 27/170 (15%)
Query: 797 YWGPKEHEK------LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNY 850
YWG H+K +I + + +Y E + ++ ++ L++++ + L Y
Sbjct: 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIY--EANAKRFSRKTV---LQLSLRILDILEY 167
Query: 851 LHNERAIPHGNLKSTNILLEAPTMNAV-LTDYSL-HRI----LTSAGTAD-QVLNAGALG 903
+H + HG++K++N+LL + V L DY L +R + A AD + + G +
Sbjct: 168 IHEHEYV-HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTI- 225
Query: 904 YRPPEFASTSKP---CPSLKSDVYAFGIILLELLTGKSSGEIVCVDPGVV 950
EF S PS + D+ G +++ LTG E DP V
Sbjct: 226 ----EFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 74 DMGLVGNFSFPTIIGLKMLCNV---SVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIP 130
D + N ++ G++ L NV ++ N+L +I+ + + +L +L L+ N L P
Sbjct: 44 DQIIANNSDIKSVQGIQYLPNVRYLALGGNKLH-DISALKELTNLTYLILTGNQLQSL-P 101
Query: 131 SGIV-SLKNLMLLNISSNSFEGTFPSG-FGGLGKLKYLDLRANRFGGDIMHLLSQLGSVV 188
+G+ L NL L + N + + P G F L L YL L N+ + +L ++
Sbjct: 102 NGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLT 160
Query: 189 HVDLSNNQ 196
+DL NNQ
Sbjct: 161 RLDLDNNQ 168
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 73 NDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSG 132
N + + N F + LK L V L + D + +L +L L HN L P G
Sbjct: 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFD--KLTNLTYLYLYHNQLQSL-PKG 151
Query: 133 IV-SLKNLMLLNISSNSFEGTFPSG-FGGLGKLKYLDLRANRFGGDIMHLLSQLGSVVHV 190
+ L NL L++ +N + + P G F L +LK L L N+ + +L S+ H+
Sbjct: 152 VFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHI 210
Query: 191 DLSNN 195
L NN
Sbjct: 211 WLLNN 215
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 106
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 107 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 164
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 165 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 216
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 217 FGVVLWEIAT 226
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 52/218 (23%)
Query: 740 IGRSCHGTLYKATLDSGS-ILAVKRL------REGIAKGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y A I+A+K L +EG+ + + RE++ +++HPN++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEIQSHLRHPNILR 78
Query: 793 LQGYYWGPKE-------------HEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLR 839
+ Y+ K +++L + Q A +++E
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE---------------- 122
Query: 840 VAVDVARCLNYLHNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLN 898
+A L+Y H ER + H ++K N+L+ + +S+H A + +
Sbjct: 123 ----LADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWSVH-----APSLRRRXM 172
Query: 899 AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
G L Y PPE K D++ G++ E L G
Sbjct: 173 CGTLDYLPPEMIEGKT--HDEKVDLWCAGVLCYEFLVG 208
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 34.7 bits (78), Expect = 0.27, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 109
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 110 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 167
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 168 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 219
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 220 FGVVLWEIAT 229
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 34.7 bits (78), Expect = 0.28, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 52/218 (23%)
Query: 740 IGRSCHGTLYKATLDSGS-ILAVKRL------REGIAKGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y A I+A+K L +EG+ + + RE++ +++HPN++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEIQSHLRHPNILR 78
Query: 793 LQGYYWGPKE-------------HEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLR 839
+ Y+ K +++L + Q A +++E
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE---------------- 122
Query: 840 VAVDVARCLNYLHNERAIPHGNLKSTNILL-EAPTMNAVLTDYSLHRILTSAGTADQVLN 898
+A L+Y H ER + H ++K N+L+ + +S+H A + +
Sbjct: 123 ----LADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWSVH-----APSLRRRXM 172
Query: 899 AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
G L Y PPE K D++ G++ E L G
Sbjct: 173 CGTLDYLPPEMIEGKT--HDEKVDLWCAGVLCYEFLVG 208
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 34.7 bits (78), Expect = 0.28, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 102
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 103 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 160
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 161 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 212
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 213 FGVVLWEIAT 222
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 847 CLNYLHNERAIPHGNLKSTNILLE--APTMNAVLTDYSLHRILTSAGTADQVLNAGALGY 904
L Y H++ + H +LK NIL + +P + D+ L + S + AG Y
Sbjct: 136 ALAYFHSQHVV-HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA--AGTALY 192
Query: 905 RPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
PE K + K D+++ G+++ LLTG
Sbjct: 193 MAPE---VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 108
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 109 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 166
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 167 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 218
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 219 FGVVLWEIAT 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.7 bits (78), Expect = 0.30, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 52/218 (23%)
Query: 740 IGRSCHGTLYKATLDSGS-ILAVKRL------REGIAKGKKEFAREVKKLGNIKHPNLVS 792
+G+ G +Y A I+A+K L +EG+ + + RE++ +++HPN++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV---EHQLRREIEIQSHLRHPNILR 79
Query: 793 LQGYYWGPKE-------------HEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLR 839
+ Y+ K +++L + Q A +++E
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE---------------- 123
Query: 840 VAVDVARCLNYLHNERAIPHGNLKSTNILLEAP-TMNAVLTDYSLHRILTSAGTADQVLN 898
+A L+Y H ER + H ++K N+L+ + +S+H A + +
Sbjct: 124 ----LADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFGWSVH-----APSLRRRXM 173
Query: 899 AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
G L Y PPE K D++ G++ E L G
Sbjct: 174 CGTLDYLPPEMIEGKT--HDEKVDLWCAGVLCYEFLVG 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 19/182 (10%)
Query: 760 AVKRLREGIAKGK--KEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
AVK + + AK K REV+ L + HPN++ L + ++ L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEILEDSSSFYIVGELYTGGEL 108
Query: 818 AVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA- 876
E RK S + R+ V + Y+H I H +LK NILLE+ +
Sbjct: 109 ---FDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCD 162
Query: 877 -VLTDYSLHRILTS-AGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
+ D+ L D++ G Y PE + K DV++ G+IL LL
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPEVL---RGTYDEKCDVWSAGVILYILL 216
Query: 935 TG 936
+G
Sbjct: 217 SG 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.31, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 137
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 138 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 195
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 196 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 247
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 248 FGVVLWEIAT 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 34.3 bits (77), Expect = 0.32, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 115
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 116 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 173
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 174 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 225
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 226 FGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 34.3 bits (77), Expect = 0.35, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 105
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 106 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 163
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 164 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 215
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 216 FGVVLWEIAT 225
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 113 QSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANR 172
Q L++S N L S I+SL L +L IS N + S F +L+YLDL N+
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80
Query: 173 FGGDIMHLLSQLGSVVHVDLSNN 195
H L H+DLS N
Sbjct: 81 LVKISCHPTVNLK---HLDLSFN 100
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 33/227 (14%)
Query: 739 VIGRSCHGTLYKA--TLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGY 796
V+G+ G + KA LDS A+K++R K + EV L ++ H +V Y
Sbjct: 13 VLGQGAFGQVVKARNALDS-RYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR---Y 67
Query: 797 YWGPKEHEKLV--ISNYINAQSLAVYLQETDPRKLPPL--------SIDERLRVAVDVAR 846
Y E V ++ +L + ++ + L L DE R+ +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 847 CLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSL----HRILTSA--------GTAD 894
L+Y+H++ I H +LK NI ++ + N + D+ L HR L G++D
Sbjct: 128 ALSYIHSQ-GIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 895 QVLNA-GALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKSSG 940
+ +A G Y E + K D+Y+ GII E++ S+G
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNE-KIDMYSLGIIFFEMIYPFSTG 231
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 50/225 (22%)
Query: 730 EELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPN 789
EEL V+ R T + + I+ K+L A+ ++ RE + +KHPN
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEY--AAKIINTKKLS---ARDHQKLEREARICRLLKHPN 91
Query: 790 LVSL------QGYYW-------GPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDE 836
+V L +G+++ G + E +V Y + + + +
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQ------------- 138
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV--LTDYSLHRILTSAGTAD 894
+ +N++H + I H +LK N+LL + A L D+ L I
Sbjct: 139 -------ILESVNHIH-QHDIVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGEQQA 189
Query: 895 QVLNAGALGYRPPEFASTS---KPCPSLKSDVYAFGIILLELLTG 936
AG GY PE KP D++A G+IL LL G
Sbjct: 190 WFGFAGTPGYLSPEVLRKDPYGKPV-----DIWACGVILYILLVG 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 806 LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
+ Y+N L ++Q L + A ++ L +LH+ + I + +LK
Sbjct: 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLHS-KGIVYRDLKLD 147
Query: 866 NILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYA 925
NILL+ + + D+ + + G A G Y PE K S+ D ++
Sbjct: 148 NILLDKDG-HIKIADFGMCK-ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV--DWWS 203
Query: 926 FGIILLELLTGKS 938
FG++L E+L G+S
Sbjct: 204 FGVLLYEMLIGQS 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE-------RAIPH 859
++S+Y SL YL ++++ +++A+ A L +LH E AI H
Sbjct: 117 LVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLN--AGALGYRPPEFASTS--- 913
+LKS NIL++ + D L R ++ T D N G Y PE S
Sbjct: 171 RDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 229
Query: 914 KPCPSLK-SDVYAFGIILLELLTGKSSGEI 942
K S K +D+YA G++ E+ S G I
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGI 259
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNER-------AIPH 859
++S+Y SL YL ++++ +++A+ A L +LH E AI H
Sbjct: 104 LVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 157
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLN--AGALGYRPPEFASTS--- 913
+LKS NIL++ + D L R ++ T D N G Y PE S
Sbjct: 158 RDLKSKNILVK-KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 216
Query: 914 KPCPSLK-SDVYAFGIILLELLTGKSSGEI 942
K S K +D+YA G++ E+ S G I
Sbjct: 217 KHFESFKRADIYAMGLVFWEIARRCSIGGI 246
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE-------RAIPH 859
++S+Y SL YL ++++ +++A+ A L +LH E AI H
Sbjct: 79 LVSDYHEHGSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 132
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLN--AGALGYRPPEFASTS--- 913
+LKS NIL++ + D L R ++ T D N G Y PE S
Sbjct: 133 RDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 191
Query: 914 KPCPSLK-SDVYAFGIILLELLTGKSSGEI 942
K S K +D+YA G++ E+ S G I
Sbjct: 192 KHFESFKRADIYAMGLVFWEIARRCSIGGI 221
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE-------RAIPH 859
++S+Y SL YL ++++ +++A+ A L +LH E AI H
Sbjct: 78 LVSDYHEHGSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLN--AGALGYRPPEFASTS--- 913
+LKS NIL++ + D L R ++ T D N G Y PE S
Sbjct: 132 RDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 914 KPCPSLK-SDVYAFGIILLELLTGKSSGEI 942
K S K +D+YA G++ E+ S G I
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGI 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE-------RAIPH 859
++S+Y SL YL ++++ +++A+ A L +LH E AI H
Sbjct: 84 LVSDYHEHGSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 137
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLN--AGALGYRPPEFASTS--- 913
+LKS NIL++ + D L R ++ T D N G Y PE S
Sbjct: 138 RDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 196
Query: 914 KPCPSLK-SDVYAFGIILLELLTGKSSGEI 942
K S K +D+YA G++ E+ S G I
Sbjct: 197 KHFESFKRADIYAMGLVFWEIARRCSIGGI 226
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 807 VISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNE-------RAIPH 859
++S+Y SL YL ++++ +++A+ A L +LH E AI H
Sbjct: 81 LVSDYHEHGSLFDYLNRYT------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 134
Query: 860 GNLKSTNILLEAPTMNAVLTDYSLH-RILTSAGTADQVLN--AGALGYRPPEFASTS--- 913
+LKS NIL++ + D L R ++ T D N G Y PE S
Sbjct: 135 RDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 193
Query: 914 KPCPSLK-SDVYAFGIILLELLTGKSSGEI 942
K S K +D+YA G++ E+ S G I
Sbjct: 194 KHFESFKRADIYAMGLVFWEIARRCSIGGI 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.9 bits (76), Expect = 0.46, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 115
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N ++ A
Sbjct: 116 KSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCMV-AE 173
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 174 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 225
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 226 FGVVLWEIAT 235
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 740 IGRSCHGTLYKAT-LDSGSILAVKRLREGIAKG--KKEFAREVKKLGNIKHPNLVSLQGY 796
+G +G++ A SG +A+K+L K RE+ L +++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSI-DERLRVAV-DVARCLNYLHNE 854
+ P + N+ + + ++Q TD +K+ L +E+++ V + + L Y+H+
Sbjct: 92 F-TPASS----LRNFYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSK 914
+ H +LK N+ + +L D+ L R + T V YR PE S
Sbjct: 146 -GVVHRDLKPGNLAVNEDCELKIL-DFGLARHADAEMTGYVVTR----WYRAPEVI-LSW 198
Query: 915 PCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ E+LTGK+
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 806 LVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKST 865
+ Y+N L ++Q L + A ++ L +LH+ + I + +LK
Sbjct: 95 FFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLHS-KGIVYRDLKLD 148
Query: 866 NILLEAPTMNAVLTDYSLHR--ILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDV 923
NILL+ + + D+ + + +L A T + G Y PE K S+ D
Sbjct: 149 NILLDKDG-HIKIADFGMCKENMLGDAKTNE---FCGTPDYIAPEILLGQKYNHSV--DW 202
Query: 924 YAFGIILLELLTGKS 938
++FG++L E+L G+S
Sbjct: 203 WSFGVLLYEMLIGQS 217
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 29/158 (18%)
Query: 369 MVPNQTSQFLRLTSFKVSNN--------SLEGDLPAVLGTY-----PELKVIDLSLNHLN 415
+VPN T Q L +K+ +N L + LG+Y PEL+V+DLS +
Sbjct: 7 VVPNITYQCEELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 66
Query: 416 GFLLPSFFTSTKLTDLNLSGN--------NFSGPLPLQE-IQNNPSTGSTQNL------S 460
++ + + L+ L L+GN FSG LQ+ + + S +N +
Sbjct: 67 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 126
Query: 461 LTSLDLAYNSLSGRLLPG-ISKFHNLVYLNLSNNKFEG 497
L L++A+N + LP S NL +L+LS+NK +
Sbjct: 127 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.5 bits (75), Expect = 0.59, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 19/182 (10%)
Query: 760 AVKRLREGIAKGK--KEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
AVK + + AK K REV+ L + HPN++ L + ++ L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEILEDSSSFYIVGELYTGGEL 108
Query: 818 AVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA- 876
E RK S + R+ V + Y+H I H +LK NILLE+ +
Sbjct: 109 ---FDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCD 162
Query: 877 -VLTDYSLHRILT-SAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
+ D+ L + D++ G Y PE + K DV++ G+IL LL
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPEVLRGTY---DEKCDVWSAGVILYILL 216
Query: 935 TG 936
+G
Sbjct: 217 SG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.5 bits (75), Expect = 0.59, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 19/182 (10%)
Query: 760 AVKRLREGIAKGK--KEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
AVK + + AK K REV+ L + HPN++ L + ++ L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEILEDSSSFYIVGELYTGGEL 108
Query: 818 AVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNA- 876
E RK S + R+ V + Y+H I H +LK NILLE+ +
Sbjct: 109 ---FDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCD 162
Query: 877 -VLTDYSLHRILT-SAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELL 934
+ D+ L + D++ G Y PE + K DV++ G+IL LL
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPEVLRGTY---DEKCDVWSAGVILYILL 216
Query: 935 TG 936
+G
Sbjct: 217 SG 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 740 IGRSCHGTLYKAT-LDSGSILAVKRLREGIAKG--KKEFAREVKKLGNIKHPNLVSLQGY 796
+G +G++ A SG +A+K+L K RE+ L +++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 797 YWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSI-DERLRVAV-DVARCLNYLHNE 854
+ P + N+ + + ++Q TD +K+ + +E+++ V + + L Y+H+
Sbjct: 110 F-TPASS----LRNFYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 855 RAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSK 914
+ H +LK N+ + +L D+ L R + T V YR PE S
Sbjct: 164 -GVVHRDLKPGNLAVNEDCELKIL-DFGLARHADAEMTGYVVTR----WYRAPEVI-LSW 216
Query: 915 PCPSLKSDVYAFGIILLELLTGKS 938
+ D+++ G I+ E+LTGK+
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.5 bits (75), Expect = 0.66, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 25/190 (13%)
Query: 759 LAVKRLREGIA-KGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSL 817
+A+K + E + + + EF E + ++V L G + LVI + L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDL 102
Query: 818 AVYLQETDPRK-----LPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAP 872
YL+ P L P S+ + +++A ++A + YL+ + + H +L + N + A
Sbjct: 103 KSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV-HRDLAARNCXV-AE 160
Query: 873 TMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLK-------SDVYA 925
+ D+ + R + G G P + S SLK SDV++
Sbjct: 161 DFTVKIGDFGMTRDIYET----DYYRKGGKGLLPVRWMSPE----SLKDGVFTTYSDVWS 212
Query: 926 FGIILLELLT 935
FG++L E+ T
Sbjct: 213 FGVVLWEIAT 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Query: 755 SGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSLQGYYWGPKEHEKL-----VIS 809
+G +A+K++ + +E + ++ L + HPN+V LQ Y++ E ++ V+
Sbjct: 47 TGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVM 105
Query: 810 NYI----NAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERA-IPHGNLKS 864
Y+ + Y ++ P PP+ I L + R + LH + H ++K
Sbjct: 106 EYVPDTLHRCCRNYYRRQVAP---PPILIKVFL---FQLIRSIGCLHLPSVNVCHRDIKP 159
Query: 865 TNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTSKPCPSLKSDVY 924
N+L+ L D+ + L+ + V + YR PE ++ + D++
Sbjct: 160 HNVLVNEADGTLKLCDFGSAKKLSP--SEPNVAYICSRYYRAPELIFGNQHY-TTAVDIW 216
Query: 925 AFGIILLELLTGKSSGEIVCVDPGVVDLTDWVRLLALENRS 965
+ G I E++ G+ I D L + VR+L +R
Sbjct: 217 SVGCIFAEMMLGEP---IFRGDNSAGQLHEIVRVLGCPSRE 254
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 114 SLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSG-FGGLGKLKYLDLRANR 172
+ + L L N L P SL L LN++ N P G F L KL +L L N+
Sbjct: 41 TTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTA-LPVGVFDKLTKLTHLALHINQ 99
Query: 173 FGGDIMHLLSQLGSVVHVDLSNN 195
M + L S+ H+ L NN
Sbjct: 100 LKSIPMGVFDNLKSLTHIYLFNN 122
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 58/284 (20%)
Query: 297 NQLEGPVGSITSATLKKVNLSSNKLSGSLPARVGHCTIVDLSNNRLSGDLSRMQNWGNYV 356
NQLE S+ LK +++ +N L LP + NN+L +L +QN ++
Sbjct: 141 NQLEKLPELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQLE-ELPELQNLP-FL 197
Query: 357 EDIHLSSNFLTGMVPNQTSQFLRLTSFKVSNNSLEGDLPAV---------------LGTY 401
I+ +N L + L L S NN LE +LP + L T
Sbjct: 198 TAIYADNNSLKKL----PDLPLSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKTL 252
Query: 402 PELKVIDLSLNHLNGFL--LPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNL 459
P+L +LN + +L LP S LT L++S N FSG L E+ N
Sbjct: 253 PDLPPSLEALNVRDNYLTDLPELPQS--LTFLDVSENIFSG---LSELPPN--------- 298
Query: 460 SLTSLDLAYNSLSG--RLLPGISKFHNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNL 517
L L+ + N + L P + + LN+SNNK +P LP L+ SFN+L
Sbjct: 299 -LYYLNASSNEIRSLCDLPPSLEE------LNVSNNKL-IELP-ALPPRLERLIASFNHL 349
Query: 518 SGV--VPENLRNFPDSAFHPGNSLLTFPNSPSQQDVPDLTLRGH 559
+ V +P+NL+ ++P L FP+ P + V DL + H
Sbjct: 350 AEVPELPQNLKQL-HVEYNP---LREFPDIP--ESVEDLRMNSH 387
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 106 ITDIGSI-QSLEFLDLSHNLFHGL--IPSGIVSLKNLMLLNISSNSFEG--TFPSGFGGL 160
+TD+ + QSL FLD+S N+F GL +P NL LN SSN P L
Sbjct: 269 LTDLPELPQSLTFLDVSENIFSGLSELPP------NLYYLNASSNEIRSLCDLPPSLEEL 322
Query: 161 G-------KLKYLDLRANRFGGDIMHL 180
+L L R R HL
Sbjct: 323 NVSNNKLIELPALPPRLERLIASFNHL 349
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDE 836
RE + L + H N+V L K++I + SL L+E P L E
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE--PSNAYGLPESE 113
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
L V DV +N+L E I H N+K NI+
Sbjct: 114 FLIVLRDVVGGMNHL-RENGIVHRNIKPGNIM 144
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 109/272 (40%), Gaps = 25/272 (9%)
Query: 92 LCNVSVSNNQLMGN-ITDIGS-----IQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNIS 145
LC++SV + L + +D+ S ++ LDL+ +GL PSGI + +L L ++
Sbjct: 250 LCDMSVESINLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNGL-PSGIEGMNSLKKLVLN 308
Query: 146 SNSFEGTFPSGFGGLGKLKYLDLRANRFGGDI-MHLLSQLGSVVHVDLSNNQXXXXXXXX 204
+NSF+ L+ L ++ N D+ L +L ++ +DLS++
Sbjct: 309 ANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSD-IEASDCC 367
Query: 205 XXXXXXXXXXQYLNISENSLVGELFPHDGMPYFDNLEVFDASNNHLVGAIPS--FNFVFS 262
QYLN+S N +G LE+ D + HL P F +
Sbjct: 368 NLQLKNLRHLQYLNLSYNEPLG--LEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHL 425
Query: 263 LRILRLG------SNQ--LSGSLPVAXXXXXXXXXXXXXXXXNQLEGPVGSITSATLKKV 314
LR+L L SNQ L+G + L VGS+ L
Sbjct: 426 LRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSC 485
Query: 315 NLSSNKLSGSLPAR-VGHCTIVDLSNNRLSGD 345
NL S R V H +DLS+N L+GD
Sbjct: 486 NLLSIDQQAFHGLRNVNH---LDLSHNSLTGD 514
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 17/110 (15%)
Query: 93 CNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLM-------LLNIS 145
C + SN L+ +Q L L+L N F G +S NL+ +L +S
Sbjct: 434 CLLDTSNQHLLA------GLQDLRHLNLQGNSFQ----DGSISKTNLLQMVGSLEILILS 483
Query: 146 SNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSVVHVDLSNN 195
S + F GL + +LDL N GD M LS L + SNN
Sbjct: 484 SCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGLYLNMASNN 533
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 116 EFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGG 175
LDL N L S +L L ++ N P F L L+ L LR+NR
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94
Query: 176 DIMHLLSQLGSVVHVDLSNNQ 196
+ + + L ++ +D+S N+
Sbjct: 95 IPLGVFTGLSNLTKLDISENK 115
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 86 IIGLKMLCNVSVSNNQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNIS 145
I L + ++ N L +I ++ +L LDLSHN L P+ + S L
Sbjct: 243 IFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSL-PAELGSCFQLKYFYFF 301
Query: 146 SNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQ 183
N T P FG L L++L + N + +L++
Sbjct: 302 DNMV-TTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 48/200 (24%)
Query: 755 SGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSL------QGYYW-------GPK 801
+ I+ K+L A+ ++ RE + +KHPN+V L +G+++ G +
Sbjct: 33 AAKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 802 EHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGN 861
E +V Y + + +Q+ + +N+ H I H +
Sbjct: 90 LFEDIVAREYYSEADASHCIQQ--------------------ILESVNHCHLN-GIVHRD 128
Query: 862 LKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS---KPC 916
LK N+LL + + A L D+ L I AG GY PE KP
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 917 PSLKSDVYAFGIILLELLTG 936
D++A G+IL LL G
Sbjct: 188 -----DMWACGVILYILLVG 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ VA+ + +L ++ I H +L + NILL + + D+ L R + + ++ V+
Sbjct: 174 SYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKI-CDFGLARHIKN--DSNYVVKGN 229
Query: 901 A---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-GKSSGEIVCVDPGVVDL-TDW 955
A + + PE S + +SDV+++GI L EL + G S + VD + +
Sbjct: 230 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 956 VRLLALENRSGECFD--RLIMDGHDMEQP 982
R+L+ E+ E +D + D +++P
Sbjct: 288 FRMLSPEHAPAEMYDIMKTCWDADPLKRP 316
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 48/200 (24%)
Query: 755 SGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSL------QGYYW-------GPK 801
+ I+ K+L A+ ++ RE + +KHPN+V L +G+++ G +
Sbjct: 33 AAKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 802 EHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGN 861
E +V Y + + +Q+ + +N+ H I H +
Sbjct: 90 LFEDIVAREYYSEADASHCIQQ--------------------ILESVNHCHLN-GIVHRD 128
Query: 862 LKSTNILLEAPTMNAV--LTDYSLHRILTSAGTADQVLNAGALGYRPPEFASTS---KPC 916
LK N+LL + + A L D+ L I AG GY PE KP
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 917 PSLKSDVYAFGIILLELLTG 936
D++A G+IL LL G
Sbjct: 188 -----DMWACGVILYILLVG 202
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ VA+ + +L ++ I H +L + NILL + + D+ L R + + ++ V+
Sbjct: 167 SYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKI-CDFGLARDIKN--DSNYVVKGN 222
Query: 901 A---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-GKSSGEIVCVDPGVVDL-TDW 955
A + + PE S + +SDV+++GI L EL + G S + VD + +
Sbjct: 223 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 280
Query: 956 VRLLALENRSGECFD--RLIMDGHDMEQP 982
R+L+ E+ E +D + D +++P
Sbjct: 281 FRMLSPEHAPAEMYDIMKTCWDADPLKRP 309
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ VA+ + +L ++ I H +L + NILL + + D+ L R + + ++ V+
Sbjct: 174 SYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKI-CDFGLARDIKN--DSNYVVKGN 229
Query: 901 A---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-GKSSGEIVCVDPGVVDL-TDW 955
A + + PE S + +SDV+++GI L EL + G S + VD + +
Sbjct: 230 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 956 VRLLALENRSGECFD--RLIMDGHDMEQP 982
R+L+ E+ E +D + D +++P
Sbjct: 288 FRMLSPEHAPAEMYDIMKTCWDADPLKRP 316
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ VA+ + +L ++ I H +L + NILL + + D+ L R + + ++ V+
Sbjct: 151 SYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKI-CDFGLARDIKN--DSNYVVKGN 206
Query: 901 A---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-GKSSGEIVCVDPGVVDL-TDW 955
A + + PE S + +SDV+++GI L EL + G S + VD + +
Sbjct: 207 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264
Query: 956 VRLLALENRSGECFD--RLIMDGHDMEQP 982
R+L+ E+ E +D + D +++P
Sbjct: 265 FRMLSPEHAPAEMYDIMKTCWDADPLKRP 293
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 841 AVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAG 900
+ VA+ + +L ++ I H +L + NILL + + D+ L R + + ++ V+
Sbjct: 169 SYQVAKGMAFLASKNCI-HRDLAARNILLTHGRITKI-CDFGLARDIKN--DSNYVVKGN 224
Query: 901 A---LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT-GKSSGEIVCVDPGVVDL-TDW 955
A + + PE S + +SDV+++GI L EL + G S + VD + +
Sbjct: 225 ARLPVKWMAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 282
Query: 956 VRLLALENRSGECFD--RLIMDGHDMEQP 982
R+L+ E+ E +D + D +++P
Sbjct: 283 FRMLSPEHAPAEMYDIMKTCWDADPLKRP 311
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 848 LNYLHNERAIPHGNLKSTNILLEA-PTMNAVLTDYSLHRILTSAGTAD---QVLNAGALG 903
L+YLHN+ I H ++K N L + L D+ L + + AG
Sbjct: 181 LHYLHNQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 904 YRPPEFASTSKPCPSLKSDVYAFGIILLELLTG 936
+ PE +T+ K D ++ G++L LL G
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 777 REVKKLGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDE 836
RE + L + H N+V L K++I + SL L+E P L E
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE--PSNAYGLPESE 113
Query: 837 RLRVAVDVARCLNYLHNERAIPHGNLKSTNIL 868
L V DV +N+L E I H N+K NI+
Sbjct: 114 FLIVLRDVVGGMNHL-RENGIVHRNIKPGNIM 144
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 49/220 (22%)
Query: 740 IGRSCHGTL---YKATLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSL 793
+G +G++ Y A L +AVK+L + + ++ + RE++ L ++KH N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 794 QGYYWGPKEHEKLV------------ISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA 841
+ E ++N + +Q+L+ DE ++
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALS----------------DEHVQFL 136
Query: 842 V-DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-- 898
V + R L Y+H+ I H +LK +N+ + + +L D+ L R AD+ +
Sbjct: 137 VYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDSELRIL-DFGLAR------QADEEMTGY 188
Query: 899 AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
YR PE + D+++ G I+ ELL GK+
Sbjct: 189 VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLQGKA 227
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 782 LGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA 841
+G++ H ++V L G G +++ Y+ SL ++++ P L L
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQLL----LNWG 121
Query: 842 VDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA 901
V +A+ + YL E + H NL + N+LL++P+ V D+ + +L Q+L + A
Sbjct: 122 VQIAKGMYYL-EEHGMVHRNLAARNVLLKSPSQVQV-ADFGVADLLPP--DDKQLLYSEA 177
Query: 902 ------LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+ F + +SDV+++G+ + EL+T
Sbjct: 178 KTPIKWMALESIHFGKYTH-----QSDVWSYGVTVWELMT 212
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 114 SLEFLDLSHNLFHGLIPSG--IVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRAN 171
SL+ L L N L +G +++LKNL ++IS NSF + P K+KYL+L +
Sbjct: 362 SLQTLILRQNHLASLEKTGETLLTLKNLTNIDISKNSFH-SMPETCQWPEKMKYLNLSST 420
Query: 172 RF 173
R
Sbjct: 421 RI 422
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 110 GSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLR 169
G ++++ LDLS+N + S + NL L ++SN F LG L++LDL
Sbjct: 23 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 82
Query: 170 AN 171
N
Sbjct: 83 YN 84
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 31.6 bits (70), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 49/220 (22%)
Query: 740 IGRSCHGTL---YKATLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSL 793
+G +G++ Y A L +AVK+L + + ++ + RE++ L ++KH N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 794 QGYYWGPKEHEKLV------------ISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA 841
+ E ++N + Q+L+ DE ++
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS----------------DEHVQFL 136
Query: 842 V-DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-- 898
V + R L Y+H+ I H +LK +N+ + + +L D+ L R AD+ +
Sbjct: 137 VYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDSELRIL-DFGLAR------QADEEMTGY 188
Query: 899 AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
YR PE + D+++ G I+ ELL GK+
Sbjct: 189 VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLQGKA 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 782 LGNIKHPNLVSLQGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA 841
+G++ H ++V L G G +++ Y+ SL ++++ P L L
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQ---LVTQYLPLGSLLDHVRQHRGALGPQL----LLNWG 139
Query: 842 VDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLNAGA 901
V +A+ + YL E + H NL + N+LL++P+ V D+ + +L Q+L + A
Sbjct: 140 VQIAKGMYYL-EEHGMVHRNLAARNVLLKSPSQVQV-ADFGVADLLPP--DDKQLLYSEA 195
Query: 902 ------LGYRPPEFASTSKPCPSLKSDVYAFGIILLELLT 935
+ F + +SDV+++G+ + EL+T
Sbjct: 196 KTPIKWMALESIHFGKYTH-----QSDVWSYGVTVWELMT 230
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 73 NDMGLVGNFSFPTIIGLKMLCNVSVSNNQLMG-NITDIGSIQSLEFLDLSHNLFHGLI-P 130
N + V SF + L +L + +N L G + + LE LDLS N ++ P
Sbjct: 41 NRISYVPAASFQSCRNLTIL---WLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 131 SGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLGSVVHV 190
+ L +L L++ + P F GL L+YL L+ N + LG++ H+
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 191 DLSNNQ 196
L N+
Sbjct: 158 FLHGNR 163
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 27/120 (22%)
Query: 378 LRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNN 437
+ LT K+ +N+L A L YP L +DLS N L + F +L L +S N
Sbjct: 232 VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 289
Query: 438 ------FSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSL--SGRLLPGISKFHNLVYLN 489
+ P+P +L LDL++N L R P + NL YL+
Sbjct: 290 LVALNLYGQPIP----------------TLKVLDLSHNHLLHVERNQPQFDRLENL-YLD 332
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 103 MGNITDIGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGK 162
+ N++ I +QS++ LDL+ + P + L NL +L + N P GL
Sbjct: 103 LKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTN 158
Query: 163 LKYLDLRANRF 173
L+YL + N+
Sbjct: 159 LQYLSIGNNQV 169
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 47/187 (25%)
Query: 769 AKGKKEFAREVKKLGNIKHPNLVSL------QGYYW-------GPKEHEKLVISNYINAQ 815
A+ ++ RE + +KHPN+V L +G+++ G + E +V Y +
Sbjct: 51 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 110
Query: 816 SLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMN 875
+ +Q+ + V C ++ + H NLK N+LL +
Sbjct: 111 DASHCIQQ----------------ILEAVLHC-----HQMGVVHRNLKPENLLLASKLKG 149
Query: 876 AV--LTDYSLHRILTSAGTADQVLN-AGALGYRPPEFASTS---KPCPSLKSDVYAFGII 929
A L D+ L + G AG GY PE KP D++A G+I
Sbjct: 150 AAVKLADFGL--AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPV-----DLWACGVI 202
Query: 930 LLELLTG 936
L LL G
Sbjct: 203 LYILLVG 209
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 396 AVLGTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGS 455
+ G P L ++L N L G +F ++ + +L L N ++EI N G
Sbjct: 48 GLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK------IKEISNKMFLGL 101
Query: 456 TQNLSLTSLDLAYNSLSGRLLPGISKFHNLVYLNLSNNKF 495
Q L +L+L N +S + ++L LNL++N F
Sbjct: 102 HQ---LKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 49/220 (22%)
Query: 740 IGRSCHGTL---YKATLDSGSILAVKRLR---EGIAKGKKEFAREVKKLGNIKHPNLVSL 793
+G +G++ Y A L +AVK+L + + ++ + RE++ L ++KH N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 794 QGYYWGPKEHEKLV------------ISNYINAQSLAVYLQETDPRKLPPLSIDERLRVA 841
+ E ++N + Q+L+ DE ++
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALS----------------DEHVQFL 128
Query: 842 V-DVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAVLTDYSLHRILTSAGTADQVLN-- 898
V + R L Y+H+ I H +LK +N+ + +L D+ L R AD+ +
Sbjct: 129 VYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRIL-DFGLAR------QADEEMTGY 180
Query: 899 AGALGYRPPEFASTSKPCPSLKSDVYAFGIILLELLTGKS 938
YR PE + D+++ G I+ ELL GK+
Sbjct: 181 VATRWYRAPEIMLNWMHY-NQTVDIWSVGCIMAELLQGKA 219
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 126 HGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRANRFGGDIMHLLSQLG 185
H +P+GI + N +L + N P F L LK L L +N+ G + + L
Sbjct: 31 HASVPAGIPT--NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLT 88
Query: 186 SVVHVDLSNNQ 196
+ +DL NQ
Sbjct: 89 QLTVLDLGTNQ 99
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 78/192 (40%), Gaps = 32/192 (16%)
Query: 369 MVPNQTSQFLRLTSF-KVSNNSLEGDL---PAVLGTYPELKVIDLSLNHLNGFLLPS--F 422
+VP SQ L+ F +S N + + A G +P L+ + LS NHL
Sbjct: 324 LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383
Query: 423 FTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKF 482
T LT L++S N F P+ + P NLS T + + +
Sbjct: 384 LTLKNLTSLDISRNTFH---PMPDSCQWPEKMRFLNLSSTGIRVVKTCIP---------- 430
Query: 483 HNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVPENLRNFPDSAFHPGNSLLTF 542
L L++SNN + S LP L+E +S N L+ PD++ P LL
Sbjct: 431 QTLEVLDVSNNNLD-SFSLFLPR-LQELYISRN--------KLKTLPDASLFP--VLLVM 478
Query: 543 PNSPSQ-QDVPD 553
S +Q + VPD
Sbjct: 479 KISRNQLKSVPD 490
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 110 GSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLR 169
G ++++ LDLS+N + S + NL L ++SN F LG L++LDL
Sbjct: 49 GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108
Query: 170 AN 171
N
Sbjct: 109 YN 110
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 78/192 (40%), Gaps = 32/192 (16%)
Query: 369 MVPNQTSQFLRLTSF-KVSNNSLEGDL---PAVLGTYPELKVIDLSLNHLNGFLLPS--F 422
+VP SQ L+ F +S N + + A G +P L+ + LS NHL
Sbjct: 350 LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 409
Query: 423 FTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGISKF 482
T LT L++S N F P+ + P NLS T + + +
Sbjct: 410 LTLKNLTSLDISRNTFH---PMPDSCQWPEKMRFLNLSSTGIRVVKTCIP---------- 456
Query: 483 HNLVYLNLSNNKFEGSIPDGLPNGLKEFNVSFNNLSGVVPENLRNFPDSAFHPGNSLLTF 542
L L++SNN + S LP L+E +S N L+ PD++ P LL
Sbjct: 457 QTLEVLDVSNNNLD-SFSLFLPR-LQELYISRN--------KLKTLPDASLFP--VLLVM 504
Query: 543 PNSPSQ-QDVPD 553
+ +Q + VPD
Sbjct: 505 KIASNQLKSVPD 516
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 407 IDLSLNHLNGFLLPSFFTSTKLTDLNLSGNNFSGPLPLQEIQNNPSTGSTQNLS----LT 462
I+LS N ++ F F T + L+ +NL GN L EI N +N LT
Sbjct: 438 INLSNNQISKFPKELFSTGSPLSSINLXGNX------LTEIPKNSLKDENENFKNTYLLT 491
Query: 463 SLDLAYNSLS 472
S+DL +N L+
Sbjct: 492 SIDLRFNKLT 501
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 100 NQLMGNITDIGSIQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGG 159
NQ ++ + + L +DLS+N L ++ L+ L +S N P F G
Sbjct: 41 NQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDG 100
Query: 160 LGKLKYLDLRAN 171
L L+ L L N
Sbjct: 101 LKSLRLLSLHGN 112
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.0 bits (66), Expect = 7.2, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 91/239 (38%), Gaps = 50/239 (20%)
Query: 716 GDLHLFDVSLMFTAEELSHAPAEVIGRSCHGTLYKATLDSGSILAVKRLREGIAKGKKEF 775
G +L+ S+ EEL V+ R C L + I+ K+L A+ ++
Sbjct: 14 GTENLYFQSMYQLFEELGKGAFSVV-RRCVKVLAGQEY-AAKIINTKKLS---ARDHQKL 68
Query: 776 AREVKKLGNIKHPNLVSL------QGYYW-------GPKEHEKLVISNYINAQSLAVYLQ 822
RE + +KHPN+V L +G+++ G + E +V Y + + +Q
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 128
Query: 823 ETDPRKLPPLSIDERLRVAVDVARCLNYLHNERAIPHGNLKSTNILLEAPTMNAV--LTD 880
+ + V C ++ + H +LK N+LL + A L D
Sbjct: 129 Q----------------ILEAVLHC-----HQMGVVHRDLKPENLLLASKLKGAAVKLAD 167
Query: 881 YSLHRILTSAGTADQVLNAGALGYRPPEFASTS---KPCPSLKSDVYAFGIILLELLTG 936
+ L I AG GY PE KP D++A G+IL LL G
Sbjct: 168 FGL-AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPV-----DLWACGVILYILLVG 220
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 112 IQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRAN 171
+ L+ L L+ N + L NL L++S+N + F LGKL+ + L N
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Query: 172 RF 173
+F
Sbjct: 190 QF 191
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 112 IQSLEFLDLSHNLFHGLIPSGIVSLKNLMLLNISSNSFEGTFPSGFGGLGKLKYLDLRAN 171
+ L+ L L+ N + L NL L++S+N + F LGKL+ + L N
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Query: 172 RF 173
+F
Sbjct: 190 QF 191
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 735 APAEVIGRSCHGTLYKAT-LDSGSILAVKRLREGIAKGKKEFAREVKKLGNIKHPNLVSL 793
+ E++G G ++K +G LA K ++ K K+E E+ + + H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 794 QGYYWGPKEHEKLVISNYINAQSLAVYLQETDPRKLPPLSIDERLRVAVDVARCLNYLHN 853
+ +++ +++ Y++ L + + + L L + + + + ++H
Sbjct: 152 YDAF--ESKNDIVLVMEYVDGGELFDRIID-ESYNLTEL---DTILFMKQICEGIRHMH- 204
Query: 854 ERAIPHGNLKSTNIL-LEAPTMNAVLTDYSLHRILTSAGTADQVLNAGALGYRPPEFAST 912
+ I H +LK NIL + + D+ L R +N G + PE +
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK--VNFGTPEFLAPEVVNY 262
Query: 913 SKPCPSLKSDVYAFGIILLELLTGKS 938
S +D+++ G+I LL+G S
Sbjct: 263 D--FVSFPTDMWSVGVIAYMLLSGLS 286
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 28/137 (20%)
Query: 378 LRLTSFKVSNNSLEGDLPAVLGTYPELKVIDLSLNHLNGFLLPSFFTSTKLTDLNLSGNN 437
+ LT K+ +N+L A L YP L +DLS N L + F +L L +S N
Sbjct: 226 VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 283
Query: 438 ------FSGPLPLQEI------------QNNPSTGSTQNLSLTSLDLAYNSLSGRLLPGI 479
+ P+P ++ +N P +NL L +NS+ + +
Sbjct: 284 LVALNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLD-----HNSI---VTLKL 335
Query: 480 SKFHNLVYLNLSNNKFE 496
S H L L LS+N ++
Sbjct: 336 STHHTLKNLTLSHNDWD 352
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,760,066
Number of Sequences: 62578
Number of extensions: 1179427
Number of successful extensions: 4107
Number of sequences better than 100.0: 791
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 688
Number of HSP's that attempted gapping in prelim test: 2998
Number of HSP's gapped (non-prelim): 1124
length of query: 1025
length of database: 14,973,337
effective HSP length: 109
effective length of query: 916
effective length of database: 8,152,335
effective search space: 7467538860
effective search space used: 7467538860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)