Your job contains 1 sequence.
>001701
MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN
ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF
FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN
GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR
FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS
ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL
LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV
STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER
CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC
MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE
ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV
HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ
SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ
QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD
WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP
GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP
SKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPE
QPDP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001701
(1024 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q66WV0 - symbol:RBR1 "Retinoblastoma-related pr... 3545 0. 1
TAIR|locus:2082194 - symbol:RBR1 "retinoblastoma-related ... 3528 0. 1
UNIPROTKB|A5D7M0 - symbol:RBL2 "Uncharacterized protein" ... 363 2.6e-48 3
UNIPROTKB|Q08999 - symbol:RBL2 "Retinoblastoma-like prote... 341 6.9e-46 3
UNIPROTKB|E2RIG3 - symbol:RBL2 "Uncharacterized protein" ... 339 3.0e-45 3
UNIPROTKB|H9KZ75 - symbol:RBL2 "Uncharacterized protein" ... 329 4.3e-45 4
RGD|3541 - symbol:Rbl2 "retinoblastoma-like 2" species:10... 330 2.3e-44 3
UNIPROTKB|O55081 - symbol:Rbl2 "Retinoblastoma-like prote... 330 2.3e-44 3
ZFIN|ZDB-GENE-030131-8179 - symbol:rbl1 "retinoblastoma-l... 305 8.3e-43 3
UNIPROTKB|E1BQ59 - symbol:RBL1 "Uncharacterized protein" ... 303 1.1e-42 3
UNIPROTKB|H9L1Q3 - symbol:RBL2 "Uncharacterized protein" ... 293 3.1e-42 4
MGI|MGI:105085 - symbol:Rbl2 "retinoblastoma-like 2" spec... 302 5.6e-41 3
MGI|MGI:103300 - symbol:Rbl1 "retinoblastoma-like 1 (p107... 291 3.3e-40 2
RGD|1595511 - symbol:Rbl1 "retinoblastoma-like 1 (p107)" ... 300 5.0e-40 2
UNIPROTKB|P28749 - symbol:RBL1 "Retinoblastoma-like prote... 296 1.4e-39 2
UNIPROTKB|F1PBK3 - symbol:RBL1 "Uncharacterized protein" ... 283 5.8e-38 2
UNIPROTKB|E2RQ78 - symbol:RBL1 "Uncharacterized protein" ... 283 5.8e-38 2
UNIPROTKB|E1BMR3 - symbol:RBL1 "Uncharacterized protein" ... 276 2.1e-37 2
UNIPROTKB|F1SEM0 - symbol:RBL1 "Uncharacterized protein" ... 279 6.7e-37 2
UNIPROTKB|Q9BDQ3 - symbol:RB1 "Retinoblastoma protein 1" ... 256 3.8e-36 3
UNIPROTKB|P06400 - symbol:RB1 "Retinoblastoma-associated ... 256 4.9e-36 3
UNIPROTKB|F1RK14 - symbol:RB1 "Uncharacterized protein" s... 262 9.8e-36 3
UNIPROTKB|F1NV90 - symbol:RB1 "Retinoblastoma-associated ... 263 1.2e-35 3
UNIPROTKB|E1BZL8 - symbol:RB1 "Retinoblastoma-associated ... 263 1.3e-35 3
UNIPROTKB|E1C0H8 - symbol:RB1 "Retinoblastoma-associated ... 263 1.3e-35 3
UNIPROTKB|F1NAY3 - symbol:RB1 "Retinoblastoma-associated ... 263 1.4e-35 3
UNIPROTKB|Q90600 - symbol:RB1 "Retinoblastoma-associated ... 263 1.4e-35 3
UNIPROTKB|F1NAY1 - symbol:RB1 "Retinoblastoma-associated ... 263 1.8e-35 3
UNIPROTKB|F1MD46 - symbol:RB1 "Uncharacterized protein" s... 260 5.1e-35 3
MGI|MGI:97874 - symbol:Rb1 "retinoblastoma 1" species:100... 264 5.9e-35 3
RGD|3540 - symbol:Rb1 "retinoblastoma 1" species:10116 "R... 266 1.5e-34 3
UNIPROTKB|J9NU49 - symbol:RB1 "Uncharacterized protein" s... 261 2.0e-34 3
UNIPROTKB|F1PQ32 - symbol:RB1 "Uncharacterized protein" s... 245 1.2e-32 3
UNIPROTKB|F5H837 - symbol:RBL2 "Retinoblastoma-like prote... 341 1.5e-27 1
UNIPROTKB|F1NEZ1 - symbol:F1NEZ1 "Uncharacterized protein... 293 6.4e-26 4
FB|FBgn0015799 - symbol:Rbf "Retinoblastoma-family protei... 189 3.6e-25 3
DICTYBASE|DDB_G0290551 - symbol:rblA "retinoblastoma-like... 199 1.8e-24 6
UNIPROTKB|B7Z913 - symbol:RBL2 "cDNA FLJ53278, highly sim... 277 1.9e-22 2
FB|FBgn0038390 - symbol:Rbf2 "Retinoblastoma-family prote... 157 4.8e-22 3
ZFIN|ZDB-GENE-040428-1 - symbol:rb1 "retinoblastoma 1" sp... 160 1.4e-20 3
UNIPROTKB|I3LUP8 - symbol:RBL2 "Uncharacterized protein" ... 203 1.0e-16 2
WB|WBGene00003020 - symbol:lin-35 species:6239 "Caenorhab... 163 8.4e-16 4
UNIPROTKB|G5EDT1 - symbol:lin-35 "Synthetic multivulva pr... 163 8.4e-16 4
UNIPROTKB|H9KZ60 - symbol:RBL2 "Uncharacterized protein" ... 186 5.4e-14 2
>UNIPROTKB|Q66WV0 [details] [associations]
symbol:RBR1 "Retinoblastoma-related protein 1" species:4100
"Nicotiana benthamiana" [GO:0032875 "regulation of DNA
endoreduplication" evidence=IMP] [GO:0051782 "negative regulation
of cell division" evidence=IMP] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0051782
GO:GO:0032875 InterPro:IPR024599 Pfam:PF11934 HSSP:P06400
EMBL:AY699399 ProteinModelPortal:Q66WV0 Uniprot:Q66WV0
Length = 1003
Score = 3545 (1253.0 bits), Expect = 0., P = 0.
Identities = 714/1015 (70%), Positives = 800/1015 (78%)
Query: 12 NNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEE 71
+NSE G D+ E R TD CKNGLS+ E+ E KLF ++KHLLL+N S IG E
Sbjct: 8 SNSEETGGV-DSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIGVITQEG 66
Query: 72 AERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
ER+WF FVLY V+RLSEK N G N F+LC ILR KLN+VDFFKELPQF++K
Sbjct: 67 VERYWFVFVLYSVKRLSEKEAGNSNNGDKGNAFSLCQILRGAKLNVVDFFKELPQFILKV 126
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTS 191
GP LSN+YG+DWE RLE KELQ NFVHLS+LSK YKR Y+E FL S N DK SA ++++
Sbjct: 127 GPTLSNLYGSDWEKRLEVKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPSATSNSA 186
Query: 192 GYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSR 251
++ Y+RFGWLLFL+LRIH FSRFKDLVTCTNGLVS+LAIL+IHVPVRFRNFNI DSSR
Sbjct: 187 IHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILMIHVPVRFRNFNIDDSSR 246
Query: 252 FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENID 311
FVKK +K VDL+ASL IY TS DDLR+ M+K N LI + LKKKPC ASE ++ENL+N+D
Sbjct: 247 FVKKGDK-VDLLASLSKIYQTSIDDLRETMDKVNNLITEKLKKKPCLASEFRTENLDNLD 305
Query: 312 TDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAV 371
TDGL YFE+LM + LEKDY +A +NKGELDER+F+NE+D AV
Sbjct: 306 TDGLTYFEDLMEESCLSSSVSTLEKDYSDAIQNKGELDERIFVNEEDSLLGSGSLSGGAV 365
Query: 372 NITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV-TPVSTAMTTAKWL 430
N+ G KRKFD++ASP KT+TS LSP+RS PN A SKM TPVSTAMTTA+WL
Sbjct: 366 NMNGTKRKFDAMASPAKTVTSTLSPYRS----PNC----ANSKMTAATPVSTAMTTARWL 417
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTG-SLQGA 489
RTVI PL KPSAELERFL SCD+DVT DV+RRA IILEAIFPSSG E C G SLQ
Sbjct: 418 RTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQST 477
Query: 490 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELV 549
+LMDNIWAEQRR EALKLYYRVL+ MCTAE+Q+L+ NLTSLLTNERFHRCMLACSAELV
Sbjct: 478 SLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELV 537
Query: 550 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW
Sbjct: 538 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 597
Query: 610 EKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETS 669
EKGSSMYNSL VA+P L+AEINR+GLLA+PMPSLDAIA HIN SSG L P+ SLHK+ +
Sbjct: 598 EKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLA 657
Query: 670 P-GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRXXXXXXXXXXXXXXXXQSAFASPTR 728
P GQ GDIRSPK+ C++YRSVLVERN+FTSPVKDR SAFASPTR
Sbjct: 658 PNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTR 717
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
PNPGGGGETCAET IN+FF KI KLAAVRIN M+ERLQLSQQIRE+VYCLFQ+IL+QRTS
Sbjct: 718 PNPGGGGETCAETAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTS 777
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
LFFNRHIDQIILC FYGVAKISQLNLTF+EII NYRKQPQCKPQVFRSVFVDW AR +
Sbjct: 778 LFFNRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNV 837
Query: 849 RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVF 908
R+ DHVDIITFYN++F+P+VKPLLVEL PAG N SE N +NDG P SPK S F
Sbjct: 838 RTGADHVDIITFYNEMFIPSVKPLLVELAPAGN----N--SEKNDHNDGQGPASPKPSPF 891
Query: 909 PALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
P LPDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQSPSKDL IN
Sbjct: 892 PKLPDMSPKKVSAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVIN 951
Query: 969 HRLNSNRRVRGTLNFXXXXXXXXXXXXXXXANSLYLQNGSAAASTCAVLKPEQPD 1023
+RLN NR++RG LNF ANSLYLQNG+ S A +K EQP+
Sbjct: 952 NRLNGNRKLRGALNFDVDAGLVSDSIV---ANSLYLQNGNCR-SPVAHVKTEQPE 1002
>TAIR|locus:2082194 [details] [associations]
symbol:RBR1 "retinoblastoma-related 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0051783
"regulation of nuclear division" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010090 "trichome morphogenesis"
evidence=RCA;IMP] [GO:0032875 "regulation of DNA endoreduplication"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0001558 "regulation of cell growth" evidence=IMP] [GO:2000036
"regulation of stem cell maintenance" evidence=IMP] [GO:0009553
"embryo sac development" evidence=IMP] [GO:0009567 "double
fertilization forming a zygote and endosperm" evidence=IEP]
[GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP;TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0009555 "pollen development" evidence=IMP] [GO:0022619
"generative cell differentiation" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=IGI] [GO:0008134 "transcription
factor binding" evidence=TAS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005829 GO:GO:0005634 GO:GO:0001708
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019048 GO:GO:0010090
GO:GO:0006355 GO:GO:0001558 GO:GO:0003677 GO:GO:0000082
GO:GO:0006351 GO:GO:0048366 GO:GO:0009553 GO:GO:0008134
EMBL:AP002047 EMBL:AC069472 GO:GO:0006349 GO:GO:0008356
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0051783 GO:GO:0032875 GO:GO:0009567 GO:GO:2000036
eggNOG:NOG296920 KO:K04681 InterPro:IPR024599 Pfam:PF11934
EMBL:AF245395 EMBL:AY056293 EMBL:AY150438 IPI:IPI00541504
RefSeq:NP_566417.3 UniGene:At.14958 HSSP:P06400
ProteinModelPortal:Q9LKZ3 SMR:Q9LKZ3 DIP:DIP-33046N IntAct:Q9LKZ3
STRING:Q9LKZ3 PaxDb:Q9LKZ3 PRIDE:Q9LKZ3 EnsemblPlants:AT3G12280.1
GeneID:820408 KEGG:ath:AT3G12280 GeneFarm:3420 TAIR:At3g12280
HOGENOM:HOG000078660 InParanoid:Q9LHH8 OMA:FGERICT PhylomeDB:Q9LKZ3
ProtClustDB:CLSN2690882 Genevestigator:Q9LKZ3 GO:GO:0022619
Uniprot:Q9LKZ3
Length = 1013
Score = 3528 (1247.0 bits), Expect = 0., P = 0.
Identities = 720/1034 (69%), Positives = 811/1034 (78%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT E N +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 1 MEEVQPPVTPP--IEPNG---KRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLS-EKNGENLQQGSNDNEFNLCHILRVMKLNIVD 119
+S IG+G EE ERFWFAF+LY V+RLS K + L S DNEFNLC ILR +KLNIVD
Sbjct: 56 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGLSV-SGDNEFNLCQILRALKLNIVD 114
Query: 120 FFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDA 179
FFKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +REFFL DA
Sbjct: 115 FFKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFREFFLTYDA 174
Query: 180 NGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV 239
N +K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP
Sbjct: 175 NAEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPC 232
Query: 240 RFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA 299
RFRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP A
Sbjct: 233 RFRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPA 292
Query: 300 SECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDX 359
SEC+++ L+NID DGL YFE+L+ LEKDY + KGELDERVFINE+D
Sbjct: 293 SECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERVFINEEDS 349
Query: 360 XXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
AVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G AT K+ TP
Sbjct: 350 LLGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISG-AT-KLAATP 407
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG
Sbjct: 408 VSTAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGA 467
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
+C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHR
Sbjct: 468 QCGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHR 527
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSL
Sbjct: 528 CMLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSL 587
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INFS G +
Sbjct: 588 EERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSDGA-NH 646
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRXXXXXXXXXXXXXXXX 719
S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDR
Sbjct: 647 ASSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPL 706
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC F
Sbjct: 707 QSAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFF 766
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
Q +L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+V
Sbjct: 767 QHVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYV 826
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
D R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G C
Sbjct: 827 DALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQC 882
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
PGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQS
Sbjct: 883 PGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQS 942
Query: 960 PSKDLTDINHRLN--SNRRVRGTLNFXXXXXXXXXXXXXXXANSLYLQN------GSAAA 1011
PSKDL+ IN+RLN S+ R R TLNF ANSL LQN GS A+
Sbjct: 943 PSKDLSAINNRLNNSSSNRKR-TLNFDAEAGMVSDSMV---ANSLNLQNQNQNQNGSDAS 998
Query: 1012 ST--CAVLKPEQPD 1023
S+ A LK E D
Sbjct: 999 SSGGAAPLKTEPTD 1012
>UNIPROTKB|A5D7M0 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
OrthoDB:EOG4PNXG9 EMBL:DAAA02046444 EMBL:BC140608 IPI:IPI00852473
RefSeq:NP_001091542.1 UniGene:Bt.17722 STRING:A5D7M0
Ensembl:ENSBTAT00000021613 GeneID:533294 KEGG:bta:533294
InParanoid:A5D7M0 NextBio:20875987 Uniprot:A5D7M0
Length = 1140
Score = 363 (132.8 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 146/565 (25%), Positives = 252/565 (44%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + + +L ILR + ++++FF ++ K
Sbjct: 86 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKM-----KKWED 137
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++N+ + R E L+ NF +++ K Y+ I+++ F P G KQ
Sbjct: 138 MANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 194
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----V 237
T +S+ F W+LF+ + + F D L+ C LV A+ + V
Sbjct: 195 CT---VSEVFHFCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELV 250
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + ++ K S+ +I LCS++D + + I E I + +KK
Sbjct: 251 NPNFKGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKL 310
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINE 356
+ E ENL G + E+ + K Y+ + G LDER+F+ E
Sbjct: 311 LKGKE---ENLTGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGE 356
Query: 357 DDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRS-SASHP-NGIAGGATSK 414
D +N TG+ + + ++ S P G+ S
Sbjct: 357 D--AEEEIGTLSRCLN-TGSGAETAERVQMKNILQQHFDKSKALRVSTPLTGVRYIKDSS 413
Query: 415 MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPS 474
VTPVSTA + L T++ L + PS LE+ L+SC +D T + R + E I+
Sbjct: 414 PCVTPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRSCSRDPTQAIANRLKEMYE-IYSQ 472
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
E G+N +I ++ R + LYY+VLE++ E + L +L+ +L
Sbjct: 473 HFQSEE------DGSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQ 525
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
+ FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +
Sbjct: 526 DAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVK 584
Query: 595 HLNSLEERLLESMVWEKGSSMYNSL 619
HLN +EE++L+ + W+ S +++ +
Sbjct: 585 HLNQIEEQILDHLAWKPESPLWDRI 609
Score = 298 (110.0 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 100/350 (28%), Positives = 161/350 (46%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ K Y+ + G LDER+F+ ED +N TG+ + +
Sbjct: 334 INKAYEEYVLSVGNLDERIFLGED--AEEEIGTLSRCLN-TGSGAETAERVQMKNILQQH 390
Query: 394 LSPHRS-SASHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
++ S P G+ S VTPVSTA + L T++ L + PS LE+ L+S
Sbjct: 391 FDKSKALRVSTPLTGVRYIKDSSPCVTPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRS 450
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
C +D T + R + E I+ E G+N +I ++ R + LYY+V
Sbjct: 451 CSRDPTQAIANRLKEMYE-IYSQHFQSEE------DGSNCAKDIASKHFRFAEM-LYYKV 502
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 571
LE++ E + L +L+ +L + FHR +LAC E+V ++K FP + E +
Sbjct: 503 LESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPL 561
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 631
+ KVIE FIR E+ L RE+ +HLN +EE++L+ + W+ S +++ + E N
Sbjct: 562 YHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIR------DNE-N 614
Query: 632 RLGLLADPMP--SLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSP 679
R+ + MP +L+ A I + L+P S G I SP
Sbjct: 615 RVPTCEEVMPPQNLER-ADEICIAGSPLTPRRVSEVRADSGGLGRSISSP 663
Score = 203 (76.5 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 41/125 (32%), Positives = 77/125 (61%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRRRNSGSSDSRSHQNSP 953
Query: 859 TFYNK 863
T NK
Sbjct: 954 TELNK 958
Score = 79 (32.9 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
+P +S +P + SP+++ S H VY+SP K +A++S K +Y + S
Sbjct: 1032 APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEAMLSPREKIFY-------YFSNS 1081
Query: 960 PSKDLTDINHRLNSNR---RVRGTL 981
PSK L +IN + + + RG L
Sbjct: 1082 PSKRLREINSMIRTGETPTKKRGIL 1106
Score = 63 (27.2 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E++ D+I FYN I++ +K AMK ++ + + D P P SP V
Sbjct: 999 EEERGDLIQFYNNIYIRQMKTF---------AMKYSQANAM----DAP-PLSPYPFVRTG 1044
Query: 911 LPDMSPKKVSATHNVYVSPLRTSKM 935
P ++S H VY+SP + M
Sbjct: 1045 SPRRI--QLSQNHPVYISPHKNEAM 1067
Score = 38 (18.4 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 875 ELGPAGTAMKTNRVSEVNHNNDG 897
E+ AG+ + RVSEV ++ G
Sbjct: 633 EICIAGSPLTPRRVSEVRADSGG 655
>UNIPROTKB|Q08999 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 Pathway_Interaction_DB:foxopathway
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GO:GO:0000080 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 EMBL:X76061 EMBL:S67171
EMBL:X74594 EMBL:U53220 IPI:IPI00304028 PIR:A49370
RefSeq:NP_005602.3 UniGene:Hs.513609 ProteinModelPortal:Q08999
SMR:Q08999 DIP:DIP-425N IntAct:Q08999 MINT:MINT-102310
STRING:Q08999 PhosphoSite:Q08999 DMDM:116242746 PaxDb:Q08999
PRIDE:Q08999 DNASU:5934 Ensembl:ENST00000262133 GeneID:5934
KEGG:hsa:5934 UCSC:uc002ehi.4 CTD:5934 GeneCards:GC16P053467
HGNC:HGNC:9894 HPA:CAB016547 HPA:HPA019703 MIM:180203
neXtProt:NX_Q08999 PharmGKB:PA34258 InParanoid:Q08999 KO:K16332
OMA:PPGNFPF OrthoDB:EOG4PNXG9 PhylomeDB:Q08999 ChiTaRS:RBL2
GenomeRNAi:5934 NextBio:23132 ArrayExpress:Q08999 Bgee:Q08999
CleanEx:HS_RBL2 Genevestigator:Q08999 GermOnline:ENSG00000103479
Uniprot:Q08999
Length = 1139
Score = 341 (125.1 bits), Expect = 6.9e-46, Sum P(3) = 6.9e-46
Identities = 145/569 (25%), Positives = 253/569 (44%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + + +L IL+ + ++++FF ++ K
Sbjct: 86 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKM-----KKWED 137
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++N+ + R E L+ NF +++ K Y+ I+++ F P G KQ
Sbjct: 138 MANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 194
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----V 237
T +S+ F W+LF+ + + F D L+ C LV A+ + V
Sbjct: 195 CT---VSEIFHFCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELV 250
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + ++ K S+ +I LCS++D + + I E I + +KK
Sbjct: 251 NPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKL 310
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINE 356
+ E ENL G + E+ + K Y+ + G LDER+F+ E
Sbjct: 311 LKGKE---ENLTGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGE 356
Query: 357 DDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSA---SHP-NGIAGG 410
D +N + + +K I L H +S A S P G+
Sbjct: 357 D--AEEEIGTLSRCLNAGSGTETAERVQ--MKNI---LQQHFDKSKALRISTPLTGVRYI 409
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 410 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 468
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
I+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 469 IYSQHFQPDE------DFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 521
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 522 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCR 580
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 581 EVVKHLNQIEEQILDHLAWKPESPLWEKI 609
Score = 207 (77.9 bits), Expect = 6.9e-46, Sum P(3) = 6.9e-46
Identities = 42/125 (33%), Positives = 78/125 (62%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 859 TFYNK 863
T NK
Sbjct: 954 TELNK 958
Score = 75 (31.5 bits), Expect = 6.9e-46, Sum P(3) = 6.9e-46
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
+P +S +P + SP+++ S H VY+SP K + ++S K +Y + S
Sbjct: 1031 APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNS 1080
Query: 960 PSKDLTDINHRLNSNR---RVRGTL 981
PSK L +IN + + + RG L
Sbjct: 1081 PSKRLREINSMIRTGETPTKKRGIL 1105
Score = 56 (24.8 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 847 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPA 879
S E++ D+I FYN I++ +K ++ A
Sbjct: 995 SDMEEEERGDLIQFYNNIYIKQIKTFAMKYSQA 1027
>UNIPROTKB|E2RIG3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
EMBL:AAEX03001603 RefSeq:XP_535303.2 Ensembl:ENSCAFT00000015343
GeneID:478127 KEGG:cfa:478127 Uniprot:E2RIG3
Length = 1139
Score = 339 (124.4 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 146/569 (25%), Positives = 256/569 (44%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + + +L ILR + ++++FF ++ K
Sbjct: 86 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKM-----KKWED 137
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++N+ + R E L+ NF +++ K Y+ I+++ F P G KQ
Sbjct: 138 MANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 194
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----V 237
T +S+ F W+LF+ + + F D L+ C LV A+ + V
Sbjct: 195 CT---VSEVFHFCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELV 250
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + ++ K S+ +I LCS++D + + I E I + +KK
Sbjct: 251 NPNFKGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKL 310
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINE 356
+ E ENL G + E+ + K Y+ + G LDER+F+ +
Sbjct: 311 LKGKE---ENLTGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGD 356
Query: 357 DDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSA---SHP-NGIAGG 410
D +N + + +K I L H +S A S P G+
Sbjct: 357 D--AEEEIGTLSKCLNSGSGTETAERVQ--MKNI---LQQHFDKSKALRISTPLTGVRYM 409
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 410 KDNSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYE- 468
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
I+ + C +N + I ++ R + LYY+VLE++ E + L +L+
Sbjct: 469 IY-----SQHCQPDE-DFSNSKE-IASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 520
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 521 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCR 579
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 580 EVVKHLNQIEEQILDHLAWKPESPLWDRI 608
Score = 203 (76.5 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 41/125 (32%), Positives = 77/125 (61%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 833 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 892
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 893 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 952
Query: 859 TFYNK 863
T NK
Sbjct: 953 TELNK 957
Score = 75 (31.5 bits), Expect = 3.0e-45, Sum P(3) = 3.0e-45
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
+P +S +P + SP+++ S H VY+SP K + ++S K +Y + S
Sbjct: 1031 APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNS 1080
Query: 960 PSKDLTDINHRLNSNR---RVRGTL 981
PSK L +IN + + + RG L
Sbjct: 1081 PSKRLREINSMIRTGETPTKKRGIL 1105
Score = 66 (28.3 bits), Expect = 2.6e-44, Sum P(3) = 2.6e-44
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 847 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 906
S E++ D+I FYN I++ +K AMK ++ + + D P P SP
Sbjct: 994 SDMEEEERGDLIQFYNNIYIKQIKTF---------AMKYSQANIM----DAP-PLSPYPF 1039
Query: 907 VFPALPDMSPKKVSATHNVYVSPLRTSKM 935
V P ++S H VY+SP + M
Sbjct: 1040 VRTGSPRRI--QLSQNHPVYISPHKNETM 1066
>UNIPROTKB|H9KZ75 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 OMA:CCIDLIY InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005807
Uniprot:H9KZ75
Length = 981
Score = 329 (120.9 bits), Expect = 4.3e-45, Sum P(4) = 4.3e-45
Identities = 144/552 (26%), Positives = 246/552 (44%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L LR + ++++FF ++ K ++N+ + + R E L+ NF ++
Sbjct: 8 NYVSLTPFLRCSEQSLIEFFNKM-----KKWEDMANL-PSQFRERTE--RLERNFTVSAV 59
Query: 162 LSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSR 215
+ K Y+ I+++ F P G KQ + +++ +F W+LF +HA
Sbjct: 60 IFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRRQPCT--VTEVFQFCWVLF----VHAKGN 113
Query: 216 FK----DLVTCTNGLVSILAILI---IHVP-------VRFRNFNIHDSSRFVKKSNKGVD 261
F DLV + L+ L ++ + P F+ S+ K S+
Sbjct: 114 FPMISDDLVNSYHLLLCALDLVYGNALQCPNHKELLNPNFKGLPEDFHSKDYKVSSDPPC 173
Query: 262 LIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN 320
+I LCS++ + + I E I + KK + K ENL G N
Sbjct: 174 IIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFDKKLLKG---KDENLTGFLDPG-----N 225
Query: 321 LMXXXXXXXXXNILEKDYDNATRNKGELDERVFINED-DXXXXXXXX---------XXXA 370
+ K Y+ + G LDER+F+ ED D
Sbjct: 226 F------GDSFKAINKAYEEYVLSVGNLDERIFLGEDADEEIGTLTRCLNTPSGMETAER 279
Query: 371 VNIT-GAKRKFDSLASPVKTITSPLSPHRS-SASHPNGIAGGATSKMVVTPVSTAMTTAK 428
V + ++ FD SP +T+PL+ + S+P VTPVS A +
Sbjct: 280 VQVKHNLQQHFDRSKSP--RVTTPLTGRKYIKESNP-----------YVTPVSIATYSLS 326
Query: 429 WLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG 488
L T++ L + PS LE+ ++C +D + + R + E ++ S E +
Sbjct: 327 RLHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EF 379
Query: 489 ANLMDNIWAEQ-RRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAE 547
+NL ++ ++ RR E L YY+VLE++ E + L +L+++L + FHR +LAC E
Sbjct: 380 SNLSKDVASKHFRRAEVL--YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLE 437
Query: 548 LVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESM 607
+V T+K + FP + E I + KVIE FIR E+ L RE+ +HLN +EE++LESM
Sbjct: 438 IVTFTYK-LPGSFPFITEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESM 496
Query: 608 VWEKGSSMYNSL 619
W++ S +++ +
Sbjct: 497 AWKQESILWDRI 508
Score = 196 (74.1 bits), Expect = 4.3e-45, Sum P(4) = 4.3e-45
Identities = 38/110 (34%), Positives = 69/110 (62%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+++FF K+ LA+VR+ + +L +S ++R+ V+ F+ L + +RH+DQ+++C
Sbjct: 734 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWTCFEYSLMHCPEIMMDRHLDQLLMCA 793
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR-QSGRSE 851
Y +AK+++ + +F+ I+ YR QPQ K V+RSV + R QSG S+
Sbjct: 794 IYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRRQSGSSD 843
Score = 70 (29.7 bits), Expect = 4.3e-45, Sum P(4) = 4.3e-45
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYY 947
+P +S +P++ SP++V S H VY+SP + + AL SH K +Y
Sbjct: 929 TPPLSPYPSVRISSPRRVQLSQNHAVYISPHKN--VSAL-SHREKIFY 973
Score = 62 (26.9 bits), Expect = 4.3e-45, Sum P(4) = 4.3e-45
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 847 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
S E++ D+I FYN I++ +K ++ +GT
Sbjct: 893 SDTEEEERGDLIQFYNSIYIEQIKEFALKYTSSGT 927
Score = 39 (18.8 bits), Expect = 6.9e-42, Sum P(4) = 6.9e-42
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 955 HA-YQSPSKDLTDINHR 970
HA Y SP K+++ ++HR
Sbjct: 952 HAVYISPHKNVSALSHR 968
>RGD|3541 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10116 "Rattus
norvegicus" [GO:0000785 "chromatin" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568 GO:GO:0005667
GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120
RefSeq:NP_112356.1 UniGene:Rn.11020 ProteinModelPortal:O55081
IntAct:O55081 STRING:O55081 PhosphoSite:O55081 PRIDE:O55081
GeneID:81758 KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 330 (121.2 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 145/568 (25%), Positives = 252/568 (44%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + + +L ILR + ++++FF ++ K
Sbjct: 83 WLACALYVACR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKM-----KKWED 134
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++N+ + R E L+ NF +++ K Y+ I+++ F P G KQ
Sbjct: 135 MANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 191
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----V 237
T+ I +H F W+LF+ + + F D L+ C LV A+ + V
Sbjct: 192 CTTSEI--FH-FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELV 247
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + R S+ +I LCS++D + + I + I + +KK
Sbjct: 248 NPNFKGVSEDGHPRDSHPSSDPPCVIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKL 307
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINE 356
E ENL G + E+ + K Y+ G LDER+F+ E
Sbjct: 308 LRGKE---ENLTGFLEPGN-FAESFKA----------VNKAYEEYVLATGSLDERIFLGE 353
Query: 357 D--DXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP-LSPHRS-SASHP-NGIAGGA 411
D + A A+R + ++ I L ++ +P G+
Sbjct: 354 DAEEEVGTFSRCVSAASGTESAER------TQMRDILQQHLDKSKTLRVCNPLTGVRYVQ 407
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
+ VTPVSTA + L T++ L + PS +LE+ L+SC +D T + R + E I
Sbjct: 408 ENSPCVTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-I 466
Query: 472 FPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
+ + V+ A M N + R + LYY+VLE++ E + L +L+ +
Sbjct: 467 YSQHFQPDENVSNC---AKEMAN---KHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGV 519
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
L + FH+ +LAC E+V ++K FP + E + + KVIE FIR E+ L RE
Sbjct: 520 LEQDAFHKSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCRE 578
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 579 VVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 198 (74.8 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 40/123 (32%), Positives = 74/123 (60%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE-QDHVDIIT 859
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG E + H + T
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 948
Query: 860 FYN 862
N
Sbjct: 949 ELN 951
Score = 81 (33.6 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 887 RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSK 944
+ S+ N D P P SP +P + SP++V S +H +Y+SP K +A++S K
Sbjct: 1017 KYSQANSQMDTP-PLSP----YPFVRTGSPRRVQLSQSHPIYISP---HKNEAMLSPREK 1068
Query: 945 SYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y + SPSK L +IN + + + RG L
Sbjct: 1069 IFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Score = 63 (27.2 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E++ D+I FYN I+ ++ AMK S+ N D P P SP V
Sbjct: 993 EEERGDLIQFYNNIYRKQIQTF---------AMK---YSQANSQMDTP-PLSPYPFVRTG 1039
Query: 911 LPDMSPKKVSATHNVYVSPLRTSKM 935
P ++S +H +Y+SP + M
Sbjct: 1040 SPRRV--QLSQSHPIYISPHKNEAM 1062
>UNIPROTKB|O55081 [details] [associations]
symbol:Rbl2 "Retinoblastoma-like protein 2" species:10116
"Rattus norvegicus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332
OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120 RefSeq:NP_112356.1
UniGene:Rn.11020 ProteinModelPortal:O55081 IntAct:O55081
STRING:O55081 PhosphoSite:O55081 PRIDE:O55081 GeneID:81758
KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 330 (121.2 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 145/568 (25%), Positives = 252/568 (44%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + + +L ILR + ++++FF ++ K
Sbjct: 83 WLACALYVACR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKM-----KKWED 134
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++N+ + R E L+ NF +++ K Y+ I+++ F P G KQ
Sbjct: 135 MANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 191
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----V 237
T+ I +H F W+LF+ + + F D L+ C LV A+ + V
Sbjct: 192 CTTSEI--FH-FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELV 247
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + R S+ +I LCS++D + + I + I + +KK
Sbjct: 248 NPNFKGVSEDGHPRDSHPSSDPPCVIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKL 307
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINE 356
E ENL G + E+ + K Y+ G LDER+F+ E
Sbjct: 308 LRGKE---ENLTGFLEPGN-FAESFKA----------VNKAYEEYVLATGSLDERIFLGE 353
Query: 357 D--DXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP-LSPHRS-SASHP-NGIAGGA 411
D + A A+R + ++ I L ++ +P G+
Sbjct: 354 DAEEEVGTFSRCVSAASGTESAER------TQMRDILQQHLDKSKTLRVCNPLTGVRYVQ 407
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
+ VTPVSTA + L T++ L + PS +LE+ L+SC +D T + R + E I
Sbjct: 408 ENSPCVTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-I 466
Query: 472 FPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
+ + V+ A M N + R + LYY+VLE++ E + L +L+ +
Sbjct: 467 YSQHFQPDENVSNC---AKEMAN---KHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGV 519
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
L + FH+ +LAC E+V ++K FP + E + + KVIE FIR E+ L RE
Sbjct: 520 LEQDAFHKSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCRE 578
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 579 VVKHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 198 (74.8 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 40/123 (32%), Positives = 74/123 (60%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE-QDHVDIIT 859
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG E + H + T
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 948
Query: 860 FYN 862
N
Sbjct: 949 ELN 951
Score = 81 (33.6 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 887 RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSK 944
+ S+ N D P P SP +P + SP++V S +H +Y+SP K +A++S K
Sbjct: 1017 KYSQANSQMDTP-PLSP----YPFVRTGSPRRVQLSQSHPIYISP---HKNEAMLSPREK 1068
Query: 945 SYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y + SPSK L +IN + + + RG L
Sbjct: 1069 IFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Score = 63 (27.2 bits), Expect = 1.7e-42, Sum P(3) = 1.7e-42
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E++ D+I FYN I+ ++ AMK S+ N D P P SP V
Sbjct: 993 EEERGDLIQFYNNIYRKQIQTF---------AMK---YSQANSQMDTP-PLSPYPFVRTG 1039
Query: 911 LPDMSPKKVSATHNVYVSPLRTSKM 935
P ++S +H +Y+SP + M
Sbjct: 1040 SPRRV--QLSQSHPIYISPHKNEAM 1062
>ZFIN|ZDB-GENE-030131-8179 [details] [associations]
symbol:rbl1 "retinoblastoma-like 1 (p107)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
ZFIN:ZDB-GENE-030131-8179 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL EMBL:BX936390 IPI:IPI00770273
Ensembl:ENSDART00000073865 ArrayExpress:F1QY31 Bgee:F1QY31
Uniprot:F1QY31
Length = 1058
Score = 305 (112.4 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 92/288 (31%), Positives = 143/288 (49%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ +DY+ G+ DERVF+ D A +G + +
Sbjct: 303 INRDYEEFVLTVGDFDERVFLGADADEEIGTPRKSTAEPPSG---HLSARMQVENNLQQH 359
Query: 394 LSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
RS A S P G +++VTPVS+A + L++++ L + PS L + S
Sbjct: 360 FEKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALLQIFIS 419
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
C ++ T ++ R + E F + T L GA+ MD +AE+R A LY+++
Sbjct: 420 CSRNPTESILNRVKTLGEK-FKQAYTNP---TDDLPGAH-MD--FAEKRLKLAEILYFKI 472
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 571
LE + T E + L K+ LL E H +LAC E+VL ++ + FP +LE I
Sbjct: 473 LENVMTQEMKRLQGKDWAVLLEQEVLHCSLLACCLEVVLFSYSS-QRTFPWILEIFQIPP 531
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
F KVIE FIR EE L R++ +HLNS+EE++LES W + S+++N+L
Sbjct: 532 FYFYKVIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWTRDSALWNAL 579
Score = 187 (70.9 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 40/119 (33%), Positives = 70/119 (58%)
Query: 722 AFASPTRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
A +S ++P P TG + +FF K+ LA+VR+ + +L +S ++R ++ F+
Sbjct: 753 AISSDSQPPPANKPR---RTGSLALFFRKVYHLASVRLRDLCLKLDISSELRGKIWTCFE 809
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
L T L +RH+DQ++LC Y +++I++ TF++I+ YR QPQ V+RSV +
Sbjct: 810 HSLLHCTDLMKDRHLDQLLLCAVYIISRITKEEHTFQDIMKCYRTQPQANSHVYRSVLI 868
Score = 159 (61.0 bits), Expect = 4.8e-27, Sum P(3) = 4.8e-27
Identities = 103/472 (21%), Positives = 193/472 (40%)
Query: 13 NSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEA 72
++ES + + + LC+ L++DE T E ++ FR +I N E
Sbjct: 7 DTESVRSADGSIRSNFEALCQE-LNMDEETAAEALQNFR-----------SIWNTYTLEG 54
Query: 73 E-RFWFAFVLYLVRRLSE--KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLV 129
+ W A LY R S G + +G N +L ILR KL+++ FF ++
Sbjct: 55 DVMHWLACSLYAACRKSSIPTVGRGVMEG---NCVSLTRILRSAKLSLIQFFSKM----- 106
Query: 130 KSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAS 189
K ++N+ D+ +R+ L+ NF +++ + ++ I+ + F + + +
Sbjct: 107 KKWSDMANLC-QDFRSRIG--RLERNFEVSTVIFRKFEPIFLDMFQNPQSEPPRMPRSRK 163
Query: 190 TSG---YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV-RFRNFN 245
+ISD +F W LF+ + + DLV + L+ L ++ + + R
Sbjct: 164 HRRLPCHISDVFKFCWTLFVYTKGNFHMIGDDLVNSYHLLLCCLDLVFCNALMCSNRKDL 223
Query: 246 IHDSSRFVKKSNKGVD----LIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEAS 300
I+ + R + K + + +I LC ++D + + I E I + +K+ +
Sbjct: 224 INQNFRGLPKDTENLKEMPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKRMLKGD 283
Query: 301 ECKSENL-ENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDX 359
E L E +DT F++ + +DY+ G+ DERVF+ D
Sbjct: 284 V---ETLTELLDTPN---FQD---------NNKAINRDYEEFVLTVGDFDERVFLGADAD 328
Query: 360 XXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVV 417
A +G + + RS A S P G +++V
Sbjct: 329 EEIGTPRKSTAEPPSG---HLSARMQVENNLQQHFEKTRSLAPSTPLTGRRYLKEKEVLV 385
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
TPVS+A + L++++ L + PS L + SC ++ T ++ R + E
Sbjct: 386 TPVSSATQSVSRLQSMVSGLRNAPSDALLQIFISCSRNPTESILNRVKTLGE 437
Score = 102 (41.0 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
D A Q+ ++ D+I FYN I+V ++ A K +S +++ + P
Sbjct: 903 DQADRTQTVFESEERGDLIQFYNNIYVSKMRSF---------AFKY-ALSTLDNRMEAP- 951
Query: 900 PGSPKVSVFPALPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAY 957
P SP FP++ +SP++VS H+++VSP + S ++ S+ Y G
Sbjct: 952 PLSP----FPSVRSHTLSPRRVSQKHSIFVSPHKNSSS---LTPSTAYTYRFTG------ 998
Query: 958 QSPSKDLTDINHRL 971
SPSK+L+DIN +
Sbjct: 999 -SPSKELSDINQMI 1011
>UNIPROTKB|E1BQ59 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005667 GO:GO:0000122 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:AADN02019534 EMBL:AADN02019535 IPI:IPI00588682
Ensembl:ENSGALT00000002032 Uniprot:E1BQ59
Length = 1064
Score = 303 (111.7 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 94/297 (31%), Positives = 146/297 (49%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKT---- 389
L K+Y+ G+ DERVF+ D A G RKF + KT
Sbjct: 301 LNKEYEEYVLTVGDFDERVFLGAD------------AEEEIGTPRKFPADLQVGKTAARA 348
Query: 390 -ITSPLSPH----RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
+ L H RS A S P G + V+TPV++A + L+ ++ L + PS
Sbjct: 349 HVECHLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPS 408
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
L +SC ++ ++ R I E S T L G+++ D +A R
Sbjct: 409 ELLMAIFESCARNPAESIVNRVREIGETFCRSYTQP----TDELPGSHI-D--FAVNRLK 461
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
A LYY++LE + E + LH K++T+LL + FHR ++AC E+VL + + FP
Sbjct: 462 LAEILYYKILETIMVQEMRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPW 520
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W + S+++ +L
Sbjct: 521 IIEVLDLRPFYFYKVIEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTAL 577
Score = 189 (71.6 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 39/111 (35%), Positives = 67/111 (60%)
Query: 735 GETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNR 793
G +TG + +F+ K+ LA+VR+ + +L +S +R ++ F+ L L +R
Sbjct: 768 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDR 827
Query: 794 HIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA 844
H+DQ++LC FY +AK+++ TF++I+ +YR QPQ V+RSV + SA
Sbjct: 828 HLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSA 878
Score = 133 (51.9 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 96/431 (22%), Positives = 173/431 (40%)
Query: 58 LANISAI-GNGMPEEAERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +A+ G E + W A LY R S G + +G N +L ILR +
Sbjct: 38 LRDFTALRGTYSLEGDAQHWLACALYAACRRSVLPTVGSGVMEG---NCVSLTRILRSAR 94
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ + ++ I+ + F
Sbjct: 95 LSLIQFFSKMKKWMD-----MSNV-PQEFRERVE--RLERNFEVSTVIFRKFEPIFLDIF 146
Query: 175 L-PSDANGDKQSAAASTSGY--ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILA 231
P++ Q + + D F W LF+ + + DLV + L+ L
Sbjct: 147 QNPNEETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLD 206
Query: 232 ILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIM 281
++ + P R F+ + +K S +IA+LC ++D + + I
Sbjct: 207 LVFANAILCPNRRDLLNPSFKGLPADFHAPEMKASEDPPCIIATLCELHDGLLVEAKGIK 266
Query: 282 EKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDN 340
E I+ + +K + EC + L N + EN L K+Y+
Sbjct: 267 EHYFKPYISKLFDRKILKG-ECLLD-LCN-------FTEN----------NKALNKEYEE 307
Query: 341 ATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSS 400
G+ DERVF+ D A G K + A + RS
Sbjct: 308 YVLTVGDFDERVFLGADAEEEIGTPRKFPADLQVG---KTAARAHVECHLQQHFEKKRSF 364
Query: 401 A-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTT 458
A S P G + V+TPV++A + L+ ++ L + PS L +SC ++
Sbjct: 365 APSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSELLMAIFESCARNPAE 424
Query: 459 DVMRRAHIILE 469
++ R I E
Sbjct: 425 SIVNRVREIGE 435
Score = 101 (40.6 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 852 QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL 911
++ D+I FYN ++V VK A+K + ++ +H + P P SP FP++
Sbjct: 921 EERGDLIKFYNAVYVGRVKSF---------ALKYD-ITNQDHVMEAP-PLSP----FPSI 965
Query: 912 PD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINH 969
+SP+++S H+VYVSP K A ++ + Y G SPSK L DIN+
Sbjct: 966 KQQPVSPRRISQQHSVYVSP---HKNGACLTPRTALLYKFNG-------SPSKSLKDINN 1015
Query: 970 RL 971
+
Sbjct: 1016 MI 1017
>UNIPROTKB|H9L1Q3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
EMBL:AADN02043607 Ensembl:ENSGALT00000035613 Uniprot:H9L1Q3
Length = 939
Score = 293 (108.2 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 88/293 (30%), Positives = 144/293 (49%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ K Y+ + G LDER+F+ ED +N A V+ +
Sbjct: 190 INKAYEEYVLSVGNLDERIFLGED--ADEEIGTLTRCLNTPSGMET----AERVQ-VKHN 242
Query: 394 LSPHRSSASHPN---GIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 447
L H + P + G S VTPVS A + L T++ L + PS LE+
Sbjct: 243 LQQHFDRSKSPRVTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 302
Query: 448 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALK 506
++C +D + + R + E ++ S E + +NL ++ ++ RR E L
Sbjct: 303 IFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRRAEVL- 354
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 566
YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP + E
Sbjct: 355 -YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEI 412
Query: 567 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
I + KVIE FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 413 FDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 465
Score = 196 (74.1 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 38/110 (34%), Positives = 69/110 (62%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+++FF K+ LA+VR+ + +L +S ++R+ V+ F+ L + +RH+DQ+++C
Sbjct: 691 LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWTCFEYSLMHCPEIMMDRHLDQLLMCA 750
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR-QSGRSE 851
Y +AK+++ + +F+ I+ YR QPQ K V+RSV + R QSG S+
Sbjct: 751 IYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRRQSGSSD 800
Score = 72 (30.4 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L LR + ++++FF ++ K ++N+ + + R E L+ NF ++
Sbjct: 8 NYVSLTPFLRCSEQSLIEFFNKM-----KKWEDMANL-PSQFRERTE--RLERNFTVSAV 59
Query: 162 LSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHRFGWLLFL 206
+ K Y+ I+++ F P G KQ + +++ +F W+LF+
Sbjct: 60 IFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRRQPCT--VTEVFQFCWVLFV 108
Score = 70 (29.7 bits), Expect = 3.1e-42, Sum P(4) = 3.1e-42
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYY 947
+P +S +P++ SP++V S H VY+SP + + AL SH K +Y
Sbjct: 887 TPPLSPYPSVRISSPRRVQLSQNHAVYISPHKN--VSAL-SHREKIFY 931
Score = 64 (27.6 bits), Expect = 1.3e-41, Sum P(4) = 1.3e-41
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 847 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 906
S E++ D+I FYN I++ +K ++ +G D P P SP S
Sbjct: 850 SDTEEEERGDLIQFYNSIYIEQIKEFALKYTSSG-------------QTDTP-PLSPYPS 895
Query: 907 VFPALPDMSPKKVSATHNVYVSP 929
V + P ++S H VY+SP
Sbjct: 896 VRISSPRRV--QLSQNHAVYISP 916
Score = 39 (18.8 bits), Expect = 4.9e-39, Sum P(4) = 4.9e-39
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 955 HA-YQSPSKDLTDINHR 970
HA Y SP K+++ ++HR
Sbjct: 910 HAVYISPHKNVSALSHR 926
>MGI|MGI:105085 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10090 "Mus
musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:U50850 MGI:MGI:105085 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0000785 GO:GO:0006351
GO:GO:0016568 GO:GO:0005667 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OMA:PPGNFPF OrthoDB:EOG4PNXG9 EMBL:U36799
EMBL:U47333 EMBL:AK160027 IPI:IPI00317271 RefSeq:NP_035380.3
UniGene:Mm.235580 ProteinModelPortal:Q64700 SMR:Q64700
IntAct:Q64700 MINT:MINT-5181879 STRING:Q64700 PhosphoSite:Q64700
PaxDb:Q64700 PRIDE:Q64700 Ensembl:ENSMUST00000034091 GeneID:19651
KEGG:mmu:19651 InParanoid:Q3TVP8 NextBio:296912 Bgee:Q64700
CleanEx:MM_RBL2 Genevestigator:Q64700 GermOnline:ENSMUSG00000031666
Uniprot:Q64700
Length = 1135
Score = 302 (111.4 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 147/563 (26%), Positives = 244/563 (43%)
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R + L+ NF +++ K Y+ I+++ F P G KQ T+ I +H
Sbjct: 143 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEI--FH- 199
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN-FNIHDSSRFVKKSNK 258
F W+LF I+A F + ++ LV+ +L+ + + + N + V + K
Sbjct: 200 FCWVLF----IYAKGNFPMI---SDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFK 252
Query: 259 GVDLIASLCSIYDT-SEDDLRKIMEKTNTLIAD-ILKKKPCEASECKSENLENIDTDGLI 316
G ++ C D+ + D ++EK +L +L+ K + K + + L+
Sbjct: 253 G---LSEDCHPKDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPY-IRKLFEKKLL 308
Query: 317 YF--ENL---MXXXXXXXXXNILEKDYDNATRNKGELDERVFINED--DXXXXXXXXXXX 369
ENL + + K Y+ G LDERVF+ ED +
Sbjct: 309 KGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCLSA 368
Query: 370 AVNITGAKRKFDSLASPVKTITSPLSPH--RSSASH---P-NGIAGGATSKMVVTPVSTA 423
A A+R + ++ I L H +S A P G+ + VTPVSTA
Sbjct: 369 ASGTESAER------TQMRDI---LQQHLDKSKALRVCTPLTGVRYVQENSPCVTPVSTA 419
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
+ L T++ L + PS +LER L+SC +D T + R + E I+ +
Sbjct: 420 AHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYE-IYSQHFQPDE--- 475
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
+N I + R + LYY+VLE++ E + L +L+ +L ++ FHR +LA
Sbjct: 476 ---NFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLA 531
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 603
C E+V +HK FP + E + + KVIE FIR E+ L RE+ +HLN +EE++
Sbjct: 532 CCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQI 590
Query: 604 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSL 663
L+ + W+ S +++ + E NR+ + MP + T + +G SP+
Sbjct: 591 LDHLAWKTKSPLWDRIR------DNE-NRVPTCEEVMPPQNLERTDEIYIAG--SPLTPR 641
Query: 664 HKHETSPGQNGDIRSPKRPCTDY 686
E G RS P T Y
Sbjct: 642 RVGEVRADAGGLGRSITSPTTLY 664
Score = 204 (76.9 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 42/123 (34%), Positives = 75/123 (60%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 830 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE-QDHVDIIT 859
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE + H + T
Sbjct: 890 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSPT 948
Query: 860 FYN 862
N
Sbjct: 949 ELN 951
Score = 181 (68.8 bits), Expect = 6.2e-28, Sum P(3) = 6.2e-28
Identities = 115/481 (23%), Positives = 197/481 (40%)
Query: 10 ASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMP 69
A++ ++ + + R +LC L++DE E +R + + GN +
Sbjct: 28 AADRAQPAGSPSHQIQQRFEELCSR-LNMDEAARAEAWSSYRSMSE----SYTLEGNDL- 81
Query: 70 EEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFL 128
W A LY+ R K+ + +G+ + + +L ILR + ++++FF ++
Sbjct: 82 -----HWLACALYVACR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKM---- 129
Query: 129 VKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGD 182
K ++N+ + R E L+ NF +++ K Y+ I+++ F P G
Sbjct: 130 -KKWEDMANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGR 185
Query: 183 KQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILII 235
KQ T+ I +H F W+LF+ + + F D L+ C LV A+
Sbjct: 186 KQRRQPCTTSEI--FH-FCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCS 241
Query: 236 H----VPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIAD 290
+ V F+ + + K S+ +I LCS++D + + I E I
Sbjct: 242 NRKELVNPNFKGLSEDCHPKDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRK 301
Query: 291 ILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDE 350
+ +KK + E ENL G + E+ + K Y+ G LDE
Sbjct: 302 LFEKKLLKGKE---ENLTGFLEPGN-FGESFKA----------VNKAYEEYVLAAGNLDE 347
Query: 351 RVFINED--DXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSASH--- 403
RVF+ ED + A A+R + ++ I L H +S A
Sbjct: 348 RVFLGEDAEEEVGTLSRCLSAASGTESAER------TQMRDI---LQQHLDKSKALRVCT 398
Query: 404 P-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
P G+ + VTPVSTA + L T++ L + PS +LER L+SC +D T +
Sbjct: 399 PLTGVRYVQENSPCVTPVSTAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIAD 458
Query: 463 R 463
R
Sbjct: 459 R 459
Score = 72 (30.4 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 887 RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSK 944
+ S+ N D P P SP +P + SP++V S +H +Y+SP +A+ S K
Sbjct: 1017 KYSQANAQTDTP-PLSP----YPFVRTGSPRRVQLSQSHPIYISPHNN---EAMPSPREK 1068
Query: 945 SYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y + SPSK L +IN + + + RG L
Sbjct: 1069 IFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Score = 62 (26.9 bits), Expect = 6.1e-40, Sum P(3) = 6.1e-40
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E++ D+I FYN I+ ++ AMK S+ N D P P SP V
Sbjct: 993 EEERGDLIQFYNNIYRKQIQAF---------AMK---YSQANAQTDTP-PLSPYPFVRTG 1039
Query: 911 LPDMSPKKVSATHNVYVSPLRTSKM 935
P ++S +H +Y+SP M
Sbjct: 1040 SPRRV--QLSQSHPIYISPHNNEAM 1062
>MGI|MGI:103300 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 MGI:MGI:103300 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL669828 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933
HOGENOM:HOG000273892 HOVERGEN:HBG017710 OMA:RRDMQPL
OrthoDB:EOG4QZ7KB GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:U33320 EMBL:U27177 EMBL:U27178 EMBL:AK156055 IPI:IPI00137864
IPI:IPI00352179 PIR:I49328 RefSeq:NP_001132988.1 RefSeq:NP_035379.2
UniGene:Mm.244671 ProteinModelPortal:Q64701 SMR:Q64701
IntAct:Q64701 STRING:Q64701 PhosphoSite:Q64701 PaxDb:Q64701
PRIDE:Q64701 Ensembl:ENSMUST00000029170 GeneID:19650 KEGG:mmu:19650
UCSC:uc008nos.2 InParanoid:Q3U1D4 NextBio:296908 Bgee:Q64701
CleanEx:MM_RBL1 Genevestigator:Q64701 GermOnline:ENSMUSG00000027641
Uniprot:Q64701
Length = 1063
Score = 291 (107.5 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 90/314 (28%), Positives = 149/314 (47%)
Query: 319 ENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKR 378
E L+ + K+Y+ G+ DER+F+ D A G
Sbjct: 287 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTADTPFG--- 343
Query: 379 KFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICP 436
K S AS + RS A S P G + V TPV++A + L++++
Sbjct: 344 KLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAG 403
Query: 437 LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW 496
L S PS +L +SC ++ ++++ I++ I + T G+++ D +
Sbjct: 404 LKSAPSEQLLNIFESCMRNPMGNIIK----IVKGIGETFCQHYTQSTDKQPGSHI-D--F 456
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A R A LYY++LE + E + LH +++ LL + FH+ ++AC E+VL + +
Sbjct: 457 AVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSS- 515
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++
Sbjct: 516 PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALW 575
Query: 617 NSLTV-ARPVLSAE 629
+L A V S E
Sbjct: 576 EALHASANRVPSCE 589
Score = 230 (86.0 bits), Expect = 3.3e-40, Sum P(2) = 3.3e-40
Identities = 74/249 (29%), Positives = 119/249 (47%)
Query: 741 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 784 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 843
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---VDWASARQSGRSEQDHVD 856
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + +G E D
Sbjct: 844 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGD 903
Query: 857 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVSVFP 909
I K + +P+ E G T V V +N +P +S FP
Sbjct: 904 IEDA-TKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSFALKYDLSNQDHIMDAPPLSPFP 962
Query: 910 ALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDI 967
+ SP+++S H++YVSP K A ++ S Y G SPSK L DI
Sbjct: 963 HIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG-------SPSKSLKDI 1012
Query: 968 NHRLNSNRR 976
N+ + +
Sbjct: 1013 NNMIRQGEQ 1021
Score = 144 (55.7 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 107/471 (22%), Positives = 187/471 (39%)
Query: 13 NSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEA 72
++E A A EA L LC+ L++DE + E + F + N S G +
Sbjct: 7 HAEGAAAVAAAREA-LQALCQE-LNLDEGSAAEALDDFTAIR----GNYSLEGEVI---- 56
Query: 73 ERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVK 130
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 57 --HWLACSLYVACRKSIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD- 110
Query: 131 SGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQ 184
+SN+ ++ R+E L+ NF +++ K ++ I+ + F P KQ
Sbjct: 111 ----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQ 163
Query: 185 SAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR- 240
+ + D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 164 RRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRR 220
Query: 241 ------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILK 293
F+ + K + + +IA LC ++D + + I E I+ +
Sbjct: 221 DLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFD 280
Query: 294 KKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVF 353
KK + EC L+ + K+Y+ G+ DER+F
Sbjct: 281 KKILKG-EC------------------LLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIF 321
Query: 354 INEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGA 411
+ D A G K S AS + RS A S P G
Sbjct: 322 LGADAEEEIGTPRKFTADTPFG---KLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQ 378
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+ V TPV++A + L++++ L S PS +L +SC ++ ++++
Sbjct: 379 EKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIK 429
Score = 41 (19.5 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 610 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E+G YN++ V R L +++ + D P L HI G + H
Sbjct: 921 ERGDLIKFYNTVYVGRVKSFALKYDLSNQDHIMDA-PPLSPFP-HIKQQPGSPRRISQQH 978
Query: 665 KHETSPGQNGDIRSPK 680
SP +NG +P+
Sbjct: 979 SLYVSPHKNGAGLTPR 994
Score = 37 (18.1 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 8/44 (18%), Positives = 23/44 (52%)
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+ ++P + S ++ +S +++S + TH ++ LT ++
Sbjct: 736 ISMNPTQESTAESPVSLTAQSLIGTSPKQTHLTKAQDAHLTGVS 779
Score = 37 (18.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 587 SLPRELRRHLNSLEERL-LESMVWEK 611
+LP+E R + LE + +++++K
Sbjct: 113 NLPQEFRERIERLERNFEVSTVIFKK 138
>RGD|1595511 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
RGD:1595511 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00357966
IntAct:D3ZS62 Ensembl:ENSRNOT00000009528 UCSC:RGD:1595511
Uniprot:D3ZS62
Length = 1063
Score = 300 (110.7 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 92/314 (29%), Positives = 150/314 (47%)
Query: 319 ENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKR 378
E L+ + K+Y+ G+ DER+F+ D A G
Sbjct: 287 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFAADTQFG--- 343
Query: 379 KFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICP 436
K S AS + RS A S P G + V TPV++A + L++++
Sbjct: 344 KLTSQASVDCNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAG 403
Query: 437 LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW 496
L S PS +L +SC ++ ++++ I++ I + T G+++ D +
Sbjct: 404 LKSAPSEQLLTIFESCMRNPMGNIVK----IVKGIGETFCQHYTQSTDKQPGSHI-D--F 456
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A R A LYY++LE + E + LH +++ LL + FHR +LAC E+VL + +
Sbjct: 457 AVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSS- 515
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP +++ G+ F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++
Sbjct: 516 PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALW 575
Query: 617 NSLTV-ARPVLSAE 629
+L A V S E
Sbjct: 576 EALRASANKVPSCE 589
Score = 219 (82.2 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 64/215 (29%), Positives = 106/215 (49%)
Query: 727 TRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
T+ P G TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L
Sbjct: 770 TQDAPLTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVH 829
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---VDWA 842
L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 830 CPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGE 889
Query: 843 SARQSGRSEQDHVDI--ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVS----EVNHNND 896
+G E DI T VK +L A+ RV + + +N
Sbjct: 890 VVAYNGDYEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNAIYVGRVKSFALKYDLSNQ 949
Query: 897 GPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSP 929
+P +S FP + SP+++S H++YVSP
Sbjct: 950 DHIMDAPPLSPFPHIKQQPGSPRRISQQHSIYVSP 984
Score = 147 (56.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 108/471 (22%), Positives = 188/471 (39%)
Query: 13 NSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEA 72
++E A A EA L LC+ L++DE + E + F + N S G +
Sbjct: 7 HAEGAAAVAAAREA-LQALCQE-LNLDEGSAAEALDDFTAIR----GNYSLEGEVI---- 56
Query: 73 ERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVK 130
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 57 --HWLACSLYVACRKSIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD- 110
Query: 131 SGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQ 184
+SN+ ++ R+E L+ NF +++ K ++ I+ + F LP KQ
Sbjct: 111 ----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEELPKLPRSRKQ 163
Query: 185 SAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR- 240
+ + D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 164 RRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRR 220
Query: 241 ------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILK 293
F+ + K + + +IA LC ++D + + I E I+ +
Sbjct: 221 DLLNPSFKGLPSDFHAVNFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFD 280
Query: 294 KKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVF 353
KK + EC L+ + K+Y+ G+ DER+F
Sbjct: 281 KKILKG-EC------------------LLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIF 321
Query: 354 INEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGA 411
+ D A G K S AS + RS A S P G
Sbjct: 322 LGADAEEEIGTPRKFAADTQFG---KLTSQASVDCNLQQHFEKKRSFAPSTPLTGRRYLQ 378
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+ V TPV++A + L++++ L S PS +L +SC ++ ++++
Sbjct: 379 EKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCMRNPMGNIVK 429
Score = 40 (19.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 18/102 (17%), Positives = 38/102 (37%)
Query: 385 SPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAE 444
S V + +SP ++ + G T + V P+ A + V + + +
Sbjct: 686 SSVTAESLSISPGQALLTMATTTVTGTTGRKVTVPLHGIANDAGEITLVPISMNTTQDST 745
Query: 445 LERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
E + + + ++ H+ P +G+ + TGSL
Sbjct: 746 AESLVSLTAQSLIGASPKQTHLTKTQDAPLTGISKPKRTGSL 787
Score = 38 (18.4 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+ ++ + S ++L+S +++S + TH ++ LT I+
Sbjct: 736 ISMNTTQDSTAESLVSLTAQSLIGASPKQTHLTKTQDAPLTGIS 779
Score = 37 (18.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 587 SLPRELRRHLNSLEERL-LESMVWEK 611
+LP+E R + LE + +++++K
Sbjct: 113 NLPQEFRERIERLERNFEVSTVIFKK 138
>UNIPROTKB|P28749 [details] [associations]
symbol:RBL1 "Retinoblastoma-like protein 1" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=TAS] Reactome:REACT_71
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:CH471077 Reactome:REACT_111102 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0045944 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0051726 GO:GO:0007179
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 PDB:1H28 PDBsum:1H28 eggNOG:NOG296920 KO:K04681
InterPro:IPR024599 Pfam:PF11934 EMBL:L14812 EMBL:AK290380
EMBL:AL136172 EMBL:AL365505 EMBL:AL391114 EMBL:BC032247 EMBL:M74547
EMBL:S78664 IPI:IPI00005139 IPI:IPI00375494 PIR:A47319
RefSeq:NP_002886.2 RefSeq:NP_899662.1 UniGene:Hs.207745
ProteinModelPortal:P28749 SMR:P28749 DIP:DIP-148N IntAct:P28749
MINT:MINT-1353484 STRING:P28749 PhosphoSite:P28749 DMDM:90103515
PaxDb:P28749 PRIDE:P28749 DNASU:5933 Ensembl:ENST00000344359
Ensembl:ENST00000373664 GeneID:5933 KEGG:hsa:5933 UCSC:uc002xgi.3
UCSC:uc002xgj.1 CTD:5933 GeneCards:GC20M035624 H-InvDB:HIX0040570
HGNC:HGNC:9893 MIM:116957 neXtProt:NX_P28749 PharmGKB:PA34257
HOGENOM:HOG000273892 HOVERGEN:HBG017710 InParanoid:P28749
OMA:RRDMQPL OrthoDB:EOG4QZ7KB PhylomeDB:P28749
EvolutionaryTrace:P28749 GenomeRNAi:5933 NextBio:23126
ArrayExpress:P28749 Bgee:P28749 CleanEx:HS_RBL1
Genevestigator:P28749 GermOnline:ENSG00000080839 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 Uniprot:P28749
Length = 1068
Score = 296 (109.3 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 86/306 (28%), Positives = 147/306 (48%)
Query: 319 ENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKR 378
E L+ + K+Y+ G+ DER+F+ D G
Sbjct: 287 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTRDTPLG--- 343
Query: 379 KFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICP 436
K + A+ + RS A S P G + V+TPV++A + L++++
Sbjct: 344 KLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAG 403
Query: 437 LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW 496
L + PS +L +SC ++ ++M+ IL+ I + T G+++ D +
Sbjct: 404 LKNAPSDQLINIFESCVRNPVENIMK----ILKGIGETFCQHYTQSTDEQPGSHI-D--F 456
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A R A LYY++LE + E + LH +++ LL + FHR ++AC E+VL + +
Sbjct: 457 AVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS- 515
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++
Sbjct: 516 PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALW 575
Query: 617 NSLTVA 622
+L V+
Sbjct: 576 EALQVS 581
Score = 219 (82.2 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 71/253 (28%), Positives = 122/253 (48%)
Query: 741 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + + R+ ++ D
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLK-SIPREVVAYNKNINDDFE 903
Query: 860 FYNKIFVPAVKPLLVELGPA----GTAMK------TNRVSE--VNHN--NDGPCPGSPKV 905
+ A K GP G +K RV + ++ N +P +
Sbjct: 904 MIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLANQDHMMDAPPL 963
Query: 906 SVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 963
S FP + SP+++S H++Y+SP K + ++ S Y G SPSK
Sbjct: 964 SPFPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSALLYKFNG-------SPSKS 1013
Query: 964 LTDINHRLNSNRR 976
L DIN+ + +
Sbjct: 1014 LKDINNMIRQGEQ 1026
Score = 141 (54.7 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 88/417 (21%), Positives = 170/417 (40%)
Query: 58 LANISAI-GNGMPEEAERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI GN E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K Y+ I+ + F
Sbjct: 96 LSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKYEPIFLDIF 147
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ + + D F W LF ++ F+ + + LV+
Sbjct: 148 QNPYEEPPKLPRSRKQRRIPCS---VKDLFNFCWTLF----VYTKGNFRMI---GDDLVN 197
Query: 229 ILAILIIHVPVRFRNFNIHDSSR-FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTL 287
+L+ + + F N + + + + S KG L + + T+ ++ I+ L
Sbjct: 198 SYHLLLCCLDLIFANAIMCPNRQDLLNPSFKG--LPSDFHTADFTASEEPPCIIAVLCEL 255
Query: 288 IADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGE 347
+L + + + ++ E L+ + K+Y+ G+
Sbjct: 256 HDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGD 315
Query: 348 LDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-N 405
DER+F+ D G K + A+ + RS A S P
Sbjct: 316 FDERIFLGADAEEEIGTPRKFTRDTPLG---KLTAQANVEYNLQQHFEKKRSFAPSTPLT 372
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
G + V+TPV++A + L++++ L + PS +L +SC ++ ++M+
Sbjct: 373 GRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMK 429
Score = 40 (19.1 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 19/76 (25%), Positives = 29/76 (38%)
Query: 610 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E+G YN++ V R L ++ + D P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVGRVKSFALKYDLANQDHMMDA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 665 KHETSPGQNGDIRSPK 680
SP +NG +P+
Sbjct: 984 SIYISPHKNGSGLTPR 999
Score = 37 (18.1 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 15/59 (25%), Positives = 19/59 (32%)
Query: 913 DMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYAC---VGESTHAYQSPSKDLTDIN 968
DM P + H Y SP S L + E T +PS +T N
Sbjct: 635 DMQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEMLMDKIITEGTKLKIAPSSSITAEN 693
Score = 37 (18.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 587 SLPRELRRHLNSLEERL-LESMVWEK 611
+LP+E R + LE + +++++K
Sbjct: 113 NLPQEFRERIERLERNFEVSTVIFKK 138
>UNIPROTKB|F1PBK3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
InterPro:IPR015030 Pfam:PF08934 EMBL:AAEX03013918
RefSeq:XP_534412.2 ProteinModelPortal:F1PBK3
Ensembl:ENSCAFT00000013851 GeneID:477221 KEGG:cfa:477221
Uniprot:F1PBK3
Length = 1068
Score = 283 (104.7 bits), Expect = 5.8e-38, Sum P(2) = 5.8e-38
Identities = 83/303 (27%), Positives = 145/303 (47%)
Query: 319 ENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKR 378
E L+ + K+Y+ G+ DER+F+ D G
Sbjct: 287 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLG--- 343
Query: 379 KFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICP 436
K + A+ ++ S A S P G + V+TPV++A + L++++
Sbjct: 344 KLTAQANVDCSLQQHFEKKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAG 403
Query: 437 LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW 496
L + PS +L +SC ++ ++M+ I++ I + T G+++ D +
Sbjct: 404 LKNAPSEQLINIFESCIRNPMENIMK----IVKGIGETFCQHYTQSTDEQPGSHI-D--F 456
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A R A LYY++LE + E + LH +++ LL + FHR ++AC E+VL + +
Sbjct: 457 AINRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS- 515
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++
Sbjct: 516 PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALW 575
Query: 617 NSL 619
+L
Sbjct: 576 EAL 578
Score = 217 (81.4 bits), Expect = 5.8e-38, Sum P(2) = 5.8e-38
Identities = 71/252 (28%), Positives = 120/252 (47%)
Query: 741 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI-I 858
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + ++ + D +
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNINGDFEM 904
Query: 859 T---FYNKIFVPAVK--PLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVS 906
T + P P+ E G T V+ V +N +P +S
Sbjct: 905 TDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEAPPLS 964
Query: 907 VFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDL 964
FP + SP+++S H++YVSP K + ++ S Y G SPSK L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG-------SPSKSL 1014
Query: 965 TDINHRLNSNRR 976
DIN+ + +
Sbjct: 1015 KDINNMIRQGEQ 1026
Score = 135 (52.6 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 92/427 (21%), Positives = 170/427 (39%)
Query: 58 LANISAI-GNGMPEEAERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI GN E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWMD-----MSNL-PQEFRERVE--RLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ + + D F W LF+ + + DLV + L+
Sbjct: 148 QNPYEEQPKFPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 229 ILAILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
L ++ + P R F+ + K S + +IA LC ++D + +
Sbjct: 205 CLDLIFANAIICPNRRDLLNPTFKGLPSDFHTADFKASEEPPCIIAVLCELHDGLLVEAK 264
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKD 337
I E I+ + +K + EC L+ + K+
Sbjct: 265 GIKEHYFKPYISKLFDRKVLKG-EC------------------LLDLSSFTDNSKAVNKE 305
Query: 338 YDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH 397
Y+ G+ DER+F+ D G K + A+ ++
Sbjct: 306 YEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLG---KLTAQANVDCSLQQHFEKK 362
Query: 398 RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD 455
S A S P G + V+TPV++A + L++++ L + PS +L +SC ++
Sbjct: 363 TSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIRN 422
Query: 456 VTTDVMR 462
++M+
Sbjct: 423 PMENIMK 429
Score = 43 (20.2 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 610 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E+G YN++ VAR L +++ + + P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 665 KHETSPGQNGDIRSPK 680
SP +NG +P+
Sbjct: 984 SIYVSPHKNGSGLTPR 999
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 19/105 (18%), Positives = 42/105 (40%)
Query: 385 SPVKTITSP---LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP 441
+P +IT+ +SP +S + I G T V P+ A + + + +
Sbjct: 684 APSSSITAENISISPGQSLLTMATAIVTGTTGHKVTIPLHGIANDAGEITLIPISMNTAQ 743
Query: 442 SAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
+++E + + + ++ H+ +G+ + TGSL
Sbjct: 744 ESKVESPISLTAQSLIGASPKQTHLTKAQEAHPTGISKPKRTGSL 788
Score = 38 (18.4 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 16/59 (27%), Positives = 20/59 (33%)
Query: 913 DMSPKKVSATHNVYVSPLRTSKMDALISHSS-KSYYA--CVGESTHAYQSPSKDLTDIN 968
DM P + H Y SP S L K + E T +PS +T N
Sbjct: 635 DMQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEMLVDRIITEGTKLKIAPSSSITAEN 693
>UNIPROTKB|E2RQ78 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:AAEX03013918 Ensembl:ENSCAFT00000013845 NextBio:20852741
Uniprot:E2RQ78
Length = 1068
Score = 283 (104.7 bits), Expect = 5.8e-38, Sum P(2) = 5.8e-38
Identities = 83/303 (27%), Positives = 145/303 (47%)
Query: 319 ENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKR 378
E L+ + K+Y+ G+ DER+F+ D G
Sbjct: 287 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLG--- 343
Query: 379 KFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICP 436
K + A+ ++ S A S P G + V+TPV++A + L++++
Sbjct: 344 KLTAQANVDCSLQQHFEKKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAG 403
Query: 437 LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW 496
L + PS +L +SC ++ ++M+ I++ I + T G+++ D +
Sbjct: 404 LKNAPSEQLINIFESCIRNPMENIMK----IVKGIGETFCQHYTQSTDEQPGSHI-D--F 456
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A R A LYY++LE + E + LH +++ LL + FHR ++AC E+VL + +
Sbjct: 457 AINRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS- 515
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++
Sbjct: 516 PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALW 575
Query: 617 NSL 619
+L
Sbjct: 576 EAL 578
Score = 217 (81.4 bits), Expect = 5.8e-38, Sum P(2) = 5.8e-38
Identities = 71/252 (28%), Positives = 120/252 (47%)
Query: 741 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI-I 858
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + ++ + D +
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNINGDFEM 904
Query: 859 T---FYNKIFVPAVK--PLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVS 906
T + P P+ E G T V+ V +N +P +S
Sbjct: 905 TDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEAPPLS 964
Query: 907 VFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDL 964
FP + SP+++S H++YVSP K + ++ S Y G SPSK L
Sbjct: 965 PFPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG-------SPSKSL 1014
Query: 965 TDINHRLNSNRR 976
DIN+ + +
Sbjct: 1015 KDINNMIRQGEQ 1026
Score = 135 (52.6 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 92/427 (21%), Positives = 170/427 (39%)
Query: 58 LANISAI-GNGMPEEAERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI GN E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWMD-----MSNL-PQEFRERVE--RLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ + + D F W LF+ + + DLV + L+
Sbjct: 148 QNPYEEQPKFPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 229 ILAILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
L ++ + P R F+ + K S + +IA LC ++D + +
Sbjct: 205 CLDLIFANAIICPNRRDLLNPTFKGLPSDFHTADFKASEEPPCIIAVLCELHDGLLVEAK 264
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKD 337
I E I+ + +K + EC L+ + K+
Sbjct: 265 GIKEHYFKPYISKLFDRKVLKG-EC------------------LLDLSSFTDNSKAVNKE 305
Query: 338 YDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH 397
Y+ G+ DER+F+ D G K + A+ ++
Sbjct: 306 YEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGETPLG---KLTAQANVDCSLQQHFEKK 362
Query: 398 RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD 455
S A S P G + V+TPV++A + L++++ L + PS +L +SC ++
Sbjct: 363 TSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIRN 422
Query: 456 VTTDVMR 462
++M+
Sbjct: 423 PMENIMK 429
Score = 43 (20.2 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 610 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E+G YN++ VAR L +++ + + P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVARVKSFALKYDLSNQDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 665 KHETSPGQNGDIRSPK 680
SP +NG +P+
Sbjct: 984 SIYVSPHKNGSGLTPR 999
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 19/105 (18%), Positives = 42/105 (40%)
Query: 385 SPVKTITSP---LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP 441
+P +IT+ +SP +S + I G T V P+ A + + + +
Sbjct: 684 APSSSITAENISISPGQSLLTMATAIVTGTTGHKVTIPLHGIANDAGEITLIPISMNTAQ 743
Query: 442 SAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
+++E + + + ++ H+ +G+ + TGSL
Sbjct: 744 ESKVESPISLTAQSLIGASPKQTHLTKAQEAHPTGISKPKRTGSL 788
>UNIPROTKB|E1BMR3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 EMBL:DAAA02036543
EMBL:DAAA02036542 EMBL:DAAA02036544 IPI:IPI00693192
RefSeq:NP_001179531.1 UniGene:Bt.26367 Ensembl:ENSBTAT00000015333
GeneID:524870 KEGG:bta:524870 NextBio:20874052 Uniprot:E1BMR3
Length = 1068
Score = 276 (102.2 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 80/288 (27%), Positives = 140/288 (48%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ K+Y+ G+ DER+F+ D G K + A+ +
Sbjct: 302 VNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTG---DGPLGKLTAQANVECNLQHH 358
Query: 394 LSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
S A S P G + V+TPV++A + L++++ L + PS +L +S
Sbjct: 359 FEKKTSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFES 418
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
C ++ ++M+ I++ I + T G+++ D +A R A LYY++
Sbjct: 419 CMRNPMENIMK----IVKGIGETFCQHYTQSTDEQPGSHI-D--FAVNRLKLAEILYYKI 471
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 571
LE + E + LH +++ LL + FH ++AC E+VL + + FP ++E +
Sbjct: 472 LETVMVQETRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRP 530
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 531 FYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEAL 578
Score = 219 (82.2 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 73/253 (28%), Positives = 119/253 (47%)
Query: 741 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 785 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 844
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA-------SARQSGRSEQ 852
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + S +G E
Sbjct: 845 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYSKNLNGDFEM 904
Query: 853 DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKV 905
D+ K + P+ E G T V V +N +P +
Sbjct: 905 TDCDLEDA-TKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVMEAPPL 963
Query: 906 SVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 963
S FP + SP+++S H++YVSP K + ++ S Y G SPSK
Sbjct: 964 SPFPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG-------SPSKS 1013
Query: 964 LTDINHRLNSNRR 976
L DIN+ + +
Sbjct: 1014 LKDINNMIRQGEQ 1026
Score = 123 (48.4 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 90/427 (21%), Positives = 169/427 (39%)
Query: 58 LANISAI-GNGMPEEAERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI GN E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ + + + F W LF+ + + DLV + L+
Sbjct: 148 QNPYEEPPKLPRSRKQRRIPCS---VKELFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 229 ILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
L ++ I P R F+ + + + S + +I LC ++D + +
Sbjct: 205 CLDLIFANAIMCPNRQELLNPSFKGLPSNFQTADFRASEEPPCIIPVLCELHDGLLVEAK 264
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKD 337
I E I+ + +K + EC L+ + K+
Sbjct: 265 GIKEHYFKPYISKLFDRKILKG-EC------------------LLDLCSFTDNSKAVNKE 305
Query: 338 YDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH 397
Y+ G+ DER+F+ D G K + A+ +
Sbjct: 306 YEEYVLTVGDFDERIFLGADAEEEIGTPRKFTG---DGPLGKLTAQANVECNLQHHFEKK 362
Query: 398 RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD 455
S A S P G + V+TPV++A + L++++ L + PS +L +SC ++
Sbjct: 363 TSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRN 422
Query: 456 VTTDVMR 462
++M+
Sbjct: 423 PMENIMK 429
Score = 40 (19.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 20/106 (18%), Positives = 43/106 (40%)
Query: 385 SPVKTITSP---LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP 441
+P +IT+ +SP S + I G T V P+ A + + + +
Sbjct: 684 APSSSITAENISISPGHSLLTMATAIVAGTTGHKVTIPLHGIANDAGEITLIPISMNTTQ 743
Query: 442 SAELERFLKSCDKDVTTDVMRRAHII-LEAIFPSSGLGERCVTGSL 486
+++E + + + ++ H+ + + P G+ + TGSL
Sbjct: 744 ESKVESPVSLTAQSLIGASPKQTHLTKAQEVHPI-GISKPKRTGSL 788
Score = 39 (18.8 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 610 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E+G YN++ V R L +++ + + P L HI G + H
Sbjct: 926 ERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 983
Query: 665 KHETSPGQNGDIRSPK 680
SP +NG +P+
Sbjct: 984 SIYVSPHKNGSGLTPR 999
Score = 37 (18.1 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 15/59 (25%), Positives = 19/59 (32%)
Query: 913 DMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYAC---VGESTHAYQSPSKDLTDIN 968
DM P + H Y SP S L + E T +PS +T N
Sbjct: 635 DMQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEILMDRIITEGTKLKIAPSSSITAEN 693
Score = 37 (18.1 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 587 SLPRELRRHLNSLEERL-LESMVWEK 611
+LP+E R + LE + +++++K
Sbjct: 113 NLPQEFRERIERLERNFEVSTVIFKK 138
>UNIPROTKB|F1SEM0 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 OMA:RRDMQPL GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 EMBL:CU607009
Ensembl:ENSSSCT00000008022 Uniprot:F1SEM0
Length = 1069
Score = 279 (103.3 bits), Expect = 6.7e-37, Sum P(2) = 6.7e-37
Identities = 87/313 (27%), Positives = 149/313 (47%)
Query: 319 ENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKR 378
E L+ + K+Y+ G+ DER+F+ D A G R
Sbjct: 289 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------------AEEEIGTPR 336
Query: 379 KFDSLASPVKTITSP------LSPH---RSSASHPNGIAGGA---TSKMVVTPVSTAMTT 426
KF A P+ +T+ L H ++S + + G + V+TPV++A +
Sbjct: 337 KFTGDA-PLGKLTAQVNVECNLQQHFEKKTSFAPSTPLTGRRYLREKEAVITPVASATQS 395
Query: 427 AKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
L++++ L + PS +L +SC ++ ++M+ I EA T
Sbjct: 396 VSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIVKGIGEAFCQHYTQS----TDEQ 451
Query: 487 QGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSA 546
G+++ D +A R A LYY++LE + E + LH +++ LL + FH ++AC
Sbjct: 452 PGSHI-D--FAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHHSLMACCL 508
Query: 547 ELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 606
E+VL + + FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES
Sbjct: 509 EIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILES 567
Query: 607 MVWEKGSSMYNSL 619
+ W S+++ +L
Sbjct: 568 LAWSHDSALWEAL 580
Score = 211 (79.3 bits), Expect = 6.7e-37, Sum P(2) = 6.7e-37
Identities = 70/252 (27%), Positives = 117/252 (46%)
Query: 741 TG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++
Sbjct: 786 TGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLL 845
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI-I 858
LC FY +AK+++ TF+EI+ +YR QPQ V+RSV + ++ + D +
Sbjct: 846 LCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREAMAYNKNLNGDFEM 905
Query: 859 T---FYNKIFVPAVK--PLLVELGPAGTAMKTNRVSEVNH-------NNDGPCPGSPKVS 906
T + P P+ E G T V V +N +P +S
Sbjct: 906 TDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNHDHVMEAPPLS 965
Query: 907 VFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDL 964
FP + SP+++S H++YVSP + + S Y G SPSK L
Sbjct: 966 PFPHIKQQPGSPRRISQQHSIYVSPHKNGSGP---TPRSALLYKFNG-------SPSKSL 1015
Query: 965 TDINHRLNSNRR 976
DIN+ + +
Sbjct: 1016 KDINNMIRQGEQ 1027
Score = 118 (46.6 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 87/424 (20%), Positives = 167/424 (39%)
Query: 58 LANISAIGNGMPEEAERF-WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI E E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGTYSLEGEVIHWLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 LPSDANGDKQSAAASTSGY---ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILA 231
K + + + F W LF+ + F+ + + LV+
Sbjct: 148 QSPYEEPPKLPRSRKQRRIPCSVKELFNFCWTLFVYTKDKG--NFRMI---GDDLVNSYH 202
Query: 232 ILIIHVPVRFRNFNIHDSSR-FVKKSNKGVDLIASLCSIYDTSEDD--LRKIMEKTNTLI 288
+L+ + + F N I + R + S KG+ E + + E + L+
Sbjct: 203 LLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFHTADFRAPEEPPCIIAVLCELHDGLL 262
Query: 289 ADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGEL 348
+ K + K + D ++ E L+ + K+Y+ G+
Sbjct: 263 VEA---KGIKEHYFKPYISKLFDRK-ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDF 318
Query: 349 DERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NG 406
DER+F+ D G K + + + S A S P G
Sbjct: 319 DERIFLGADAEEEIGTPRKFTGDAPLG---KLTAQVNVECNLQQHFEKKTSFAPSTPLTG 375
Query: 407 IAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHI 466
+ V+TPV++A + L++++ L + PS +L +SC ++ ++M+
Sbjct: 376 RRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIVKG 435
Query: 467 ILEA 470
I EA
Sbjct: 436 IGEA 439
Score = 38 (18.4 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 610 EKGS--SMYNSLTVARP---VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E+G YN++ V R L +++ + + P L HI G + H
Sbjct: 927 ERGDLIKFYNTIYVGRVKSFALKYDLSNHDHVMEA-PPLSPFP-HIKQQPGSPRRISQQH 984
Query: 665 KHETSPGQNGDIRSPK 680
SP +NG +P+
Sbjct: 985 SIYVSPHKNGSGPTPR 1000
Score = 37 (18.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 587 SLPRELRRHLNSLEERL-LESMVWEK 611
+LP+E R + LE + +++++K
Sbjct: 113 NLPQEFRERIERLERNFEVSTVIFKK 138
>UNIPROTKB|Q9BDQ3 [details] [associations]
symbol:RB1 "Retinoblastoma protein 1" species:9598 "Pan
troglodytes" [GO:0005634 "nucleus" evidence=ISS] [GO:0006469
"negative regulation of protein kinase activity" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019900 "kinase binding"
evidence=ISS] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISS] [GO:0045445 "myoblast differentiation" evidence=ISS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0006469 GO:GO:0016605 GO:GO:0019900 GO:GO:0051726
GO:GO:0008134 GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
HSSP:P06400 HOGENOM:HOG000136539 HOVERGEN:HBG008967
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OrthoDB:EOG4TXBRB
EMBL:AH010623 ProteinModelPortal:Q9BDQ3 STRING:Q9BDQ3
InParanoid:Q9BDQ3 Uniprot:Q9BDQ3
Length = 882
Score = 256 (95.2 bits), Expect = 3.8e-36, Sum P(3) = 3.8e-36
Identities = 67/212 (31%), Positives = 111/212 (52%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---S 474
TPV T M T + L ++ +PS L + +C + +++R I IF +
Sbjct: 327 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFA 385
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
+G+ CV I +++ +L ++LYYRV+E+M +E + L +N + LL +
Sbjct: 386 KAVGQGCV-----------EIGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLND 433
Query: 535 ERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHE 585
FH +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E
Sbjct: 434 NIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAE 493
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
+L RE+ +HL E R++ES+ W S +++
Sbjct: 494 GNLTREMIKHLERCEHRIMESLAWLSDSPLFD 525
Score = 208 (78.3 bits), Expect = 3.8e-36, Sum P(3) = 3.8e-36
Identities = 55/188 (29%), Positives = 101/188 (53%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 599 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 657
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 658 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 707
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC--PGSP-KV---SVFPALP 912
FYN +F+ +K +++ A T T +S + H P P SP ++ +++ + P
Sbjct: 708 VFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPHIPRSPYKFPSSPLRIPGGNIYIS-P 762
Query: 913 DMSPKKVS 920
SP K+S
Sbjct: 763 LKSPYKIS 770
Score = 71 (30.1 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+++ II FYN +F+ +K +++ A T T +S + H P SP FP+
Sbjct: 700 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYK--FPS 748
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP ++ N+Y+SPL++
Sbjct: 749 ----SPLRIPGG-NIYISPLKS 765
Score = 65 (27.9 bits), Expect = 3.8e-36, Sum P(3) = 3.8e-36
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 222 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEE 277
Query: 341 ATRNKGELDERVFINED 357
+LD R+F++ D
Sbjct: 278 IYLKNKDLDARLFLDHD 294
Score = 54 (24.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 88 SEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
S +NL G+ + + IL V+ L DF+K + F+ G
Sbjct: 453 SRSTSQNLDSGT---DLSFPWILNVLNLKAFDFYKVIESFIKAEG 494
Score = 40 (19.1 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 214 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 248
>UNIPROTKB|P06400 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0048667 "cell
morphogenesis involved in neuron differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051146 "striated muscle cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051402
"neuron apoptotic process" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016605 "PML body" evidence=IDA] [GO:0043550 "regulation of
lipid kinase activity" evidence=IDA] [GO:0019900 "kinase binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0050681 "androgen receptor
binding" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;TAS] [GO:0045445
"myoblast differentiation" evidence=IMP] [GO:0006469 "negative
regulation of protein kinase activity" evidence=IPI] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0001047 "core promoter binding" evidence=IDA] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000785
"chromatin" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0090230 "regulation of centromere
complex assembly" evidence=TAS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0035189 "Rb-E2F complex"
evidence=TAS] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=TAS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0045892 GO:GO:0007265 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0045893 GO:GO:0030521 GO:GO:0051301 GO:GO:0030308
GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 EMBL:CH471075
GO:GO:0045944 GO:GO:0051402 GO:GO:0000785 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0006338 GO:GO:0019900
GO:GO:0003713 GO:GO:0016514 GO:GO:0001047 GO:GO:0043433
GO:GO:0051146 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0000084 GO:GO:0050680 GO:GO:0050681 GO:GO:0045749
GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0031134 GO:GO:0000080
Pathway_Interaction_DB:foxm1pathway GO:GO:0000083 GO:GO:0045651
DrugBank:DB00047 DrugBank:DB00046 DrugBank:DB00030 DrugBank:DB00071
GO:GO:0071922 Reactome:REACT_383 PDB:1H25 PDBsum:1H25 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0031575 GO:GO:0035189
GO:GO:0043353 MIM:259500 GO:GO:0034088 PDB:2R7G PDBsum:2R7G
GO:GO:0071930 PDB:1O9K PDB:2AZE PDBsum:1O9K PDBsum:2AZE PDB:1N4M
PDBsum:1N4M GO:GO:0048667 MIM:109800 EMBL:L11910 EMBL:AF551763
EMBL:AL392048 PDB:1GH6 PDBsum:1GH6 PDB:3N5U PDBsum:3N5U
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 CTD:5925 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:M15400
EMBL:M28419 EMBL:M33647 EMBL:L41870 EMBL:M27866 EMBL:M27845
EMBL:M27846 EMBL:M27847 EMBL:M27849 EMBL:M27850 EMBL:M27851
EMBL:L35146 EMBL:M27852 EMBL:M27853 EMBL:M27854 EMBL:M27855
EMBL:M27856 EMBL:M27857 EMBL:M27858 EMBL:M27859 EMBL:M27860
EMBL:L35147 EMBL:M27862 EMBL:M27863 EMBL:M27864 EMBL:M27865
EMBL:L41889 EMBL:L41890 EMBL:L41891 EMBL:L41893 EMBL:L41894
EMBL:L41895 EMBL:L41896 EMBL:L41897 EMBL:L41898 EMBL:L41899
EMBL:L41997 EMBL:X16439 EMBL:AK291258 EMBL:AL136960 EMBL:BC039060
EMBL:BC040540 IPI:IPI00302829 PIR:JS0276 RefSeq:NP_000312.2
UniGene:Hs.408528 PDB:1AD6 PDB:1GUX PDB:1PJM PDB:2QDJ PDB:3POM
PDB:4ELJ PDB:4ELL PDBsum:1AD6 PDBsum:1GUX PDBsum:1PJM PDBsum:2QDJ
PDBsum:3POM PDBsum:4ELJ PDBsum:4ELL ProteinModelPortal:P06400
SMR:P06400 DIP:DIP-582N IntAct:P06400 MINT:MINT-98847 STRING:P06400
PhosphoSite:P06400 DMDM:132164 PaxDb:P06400 PeptideAtlas:P06400
PRIDE:P06400 DNASU:5925 Ensembl:ENST00000267163 GeneID:5925
KEGG:hsa:5925 UCSC:uc001vcb.3 GeneCards:GC13P048877 HGNC:HGNC:9884
HPA:CAB000095 HPA:CAB016687 MIM:180200 MIM:614041
neXtProt:NX_P06400 Orphanet:790 PharmGKB:PA295 InParanoid:P06400
OMA:TNILQYA OrthoDB:EOG4TXBRB PhylomeDB:P06400 BindingDB:P06400
ChEMBL:CHEMBL5288 ChiTaRS:RB1 EvolutionaryTrace:P06400
GenomeRNAi:5925 NextBio:23076 PMAP-CutDB:P06400 ArrayExpress:P06400
Bgee:P06400 CleanEx:HS_RB1 Genevestigator:P06400
GermOnline:ENSG00000139687 GO:GO:0090230 Uniprot:P06400
Length = 928
Score = 256 (95.2 bits), Expect = 4.9e-36, Sum P(3) = 4.9e-36
Identities = 67/212 (31%), Positives = 111/212 (52%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---S 474
TPV T M T + L ++ +PS L + +C + +++R I IF +
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFA 431
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
+G+ CV I +++ +L ++LYYRV+E+M +E + L +N + LL +
Sbjct: 432 KAVGQGCV-----------EIGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLND 479
Query: 535 ERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHE 585
FH +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E
Sbjct: 480 NIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAE 539
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
+L RE+ +HL E R++ES+ W S +++
Sbjct: 540 GNLTREMIKHLERCEHRIMESLAWLSDSPLFD 571
Score = 208 (78.3 bits), Expect = 4.9e-36, Sum P(3) = 4.9e-36
Identities = 55/188 (29%), Positives = 101/188 (53%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 703
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 704 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 753
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC--PGSP-KV---SVFPALP 912
FYN +F+ +K +++ A T T +S + H P P SP ++ +++ + P
Sbjct: 754 VFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPHIPRSPYKFPSSPLRIPGGNIYIS-P 808
Query: 913 DMSPKKVS 920
SP K+S
Sbjct: 809 LKSPYKIS 816
Score = 71 (30.1 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+++ II FYN +F+ +K +++ A T T +S + H P SP FP+
Sbjct: 746 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYK--FPS 794
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP ++ N+Y+SPL++
Sbjct: 795 ----SPLRIPGG-NIYISPLKS 811
Score = 65 (27.9 bits), Expect = 4.9e-36, Sum P(3) = 4.9e-36
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 268 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEE 323
Query: 341 ATRNKGELDERVFINED 357
+LD R+F++ D
Sbjct: 324 IYLKNKDLDARLFLDHD 340
Score = 54 (24.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 88 SEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
S +NL G+ + + IL V+ L DF+K + F+ G
Sbjct: 499 SRSTSQNLDSGT---DLSFPWILNVLNLKAFDFYKVIESFIKAEG 540
Score = 40 (19.1 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 260 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 294
>UNIPROTKB|F1RK14 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:CU457728
EMBL:CU406986 RefSeq:XP_001926888.4 Ensembl:ENSSSCT00000010300
GeneID:100151828 KEGG:ssc:100151828 Uniprot:F1RK14
Length = 938
Score = 262 (97.3 bits), Expect = 9.8e-36, Sum P(3) = 9.8e-36
Identities = 69/215 (32%), Positives = 114/215 (53%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV T M T + L ++ +PS L + +C + +++R I IF
Sbjct: 382 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFK---- 436
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E+ QG M+ I +++ +L ++LYYRV+E+M +E + L +N + LL + F
Sbjct: 437 -EQFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIF 491
Query: 538 HRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESL 588
H +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 492 HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL 551
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 552 TREMIKHLERCEHRIMESLAWRSDSPLFDLIKQAK 586
Score = 192 (72.6 bits), Expect = 9.8e-36, Sum P(3) = 9.8e-36
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 655 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 713
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 714 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 763
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 764 VFYNSVFMQRLKTNILQ 780
Score = 72 (30.4 bits), Expect = 9.8e-36, Sum P(3) = 9.8e-36
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 277 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSKQYEE 332
Query: 341 ATRNKGELDERVFINED 357
+LD R+F+N D
Sbjct: 333 IYLKNKDLDARLFLNHD 349
Score = 63 (27.2 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 909
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 756 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 803
Query: 910 ALPDMSPKKVSATHNVYVSPLR 931
SP ++ N+Y+SPL+
Sbjct: 804 ----SSPLRIPGG-NIYISPLK 820
Score = 50 (22.7 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 88 SEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL 128
S +NL G+ + + IL V+ L DF+K + F+
Sbjct: 508 SRSTSQNLDTGT---DLSFPWILNVLNLKAFDFYKVIESFI 545
Score = 40 (19.1 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 269 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 303
Score = 39 (18.8 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 924 NVYVSPLRTSKMDALISH-SSKSYYACVGESTHAYQSPSK 962
++Y+SPLR+ K + +S + ST Q P K
Sbjct: 614 DMYLSPLRSPKKKGSTTRVNSTANSEAQATSTFQTQKPLK 653
>UNIPROTKB|F1NV90 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00818985 Ensembl:ENSGALT00000027459
ArrayExpress:F1NV90 Uniprot:F1NV90
Length = 881
Score = 263 (97.6 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 85/281 (30%), Positives = 136/281 (48%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 321 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 378
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
E G QG I ++ R + ++LYYRV+E+M +E + L N + LL +
Sbjct: 379 AE--AVG--QGCA---EIGSQASRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNI 431
Query: 537 FHRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHE 585
FH +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 432 FHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVE 491
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--L 643
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L
Sbjct: 492 PSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTL 544
Query: 644 DAIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 682
+ H N ++ L SPV S K + Q+G +P
Sbjct: 545 NLPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 584
Score = 188 (71.2 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 597 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 655
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 656 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 705
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 706 VFYNLVFMQKLKTNILQ 722
Score = 75 (31.5 bits), Expect = 5.8e-24, Sum P(3) = 5.8e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 698 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 742
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP++V A +N+Y+SPL++
Sbjct: 743 QFSNSPRRVPAGNNIYISPLKS 764
Score = 73 (30.8 bits), Expect = 1.2e-35, Sum P(3) = 1.2e-35
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 217 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 272
Query: 342 TRNKGELDERVFINEDD 358
++D R+F++ D+
Sbjct: 273 YLKNKDIDARLFLDHDE 289
Score = 45 (20.9 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 SNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
S + + + IL V L DF+K + F +K P L+
Sbjct: 459 SAETDLSFPWILNVFDLKAFDFYKVIESF-IKVEPSLT 495
Score = 38 (18.4 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
LSP RS +G TS P +T+ T
Sbjct: 559 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 590
>UNIPROTKB|E1BZL8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00682055 Ensembl:ENSGALT00000030147
ArrayExpress:E1BZL8 Uniprot:E1BZL8
Length = 902
Score = 263 (97.6 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 356 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 413
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 414 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 465
Query: 538 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 586
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 466 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 525
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 644
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 526 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 578
Query: 645 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 682
H N ++ L SPV S K + Q+G +P
Sbjct: 579 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 617
Score = 188 (71.2 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 630 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 688
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 689 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 738
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 739 VFYNLVFMQKLKTNILQ 755
Score = 75 (31.5 bits), Expect = 6.5e-24, Sum P(3) = 6.5e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 731 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 775
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP++V A +N+Y+SPL++
Sbjct: 776 QFSNSPRRVPAGNNIYISPLKS 797
Score = 73 (30.8 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 252 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 307
Query: 342 TRNKGELDERVFINEDD 358
++D R+F++ D+
Sbjct: 308 YLKNKDIDARLFLDHDE 324
Score = 45 (20.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 SNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
S + + + IL V L DF+K + F +K P L+
Sbjct: 492 SAETDLSFPWILNVFDLKAFDFYKVIESF-IKVEPSLT 528
Score = 38 (18.4 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
LSP RS +G TS P +T+ T
Sbjct: 592 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 623
>UNIPROTKB|E1C0H8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00821844 Ensembl:ENSGALT00000036485
ArrayExpress:E1C0H8 Uniprot:E1C0H8
Length = 908
Score = 263 (97.6 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 362 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 419
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 420 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 471
Query: 538 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 586
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 472 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 531
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 644
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 532 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 584
Query: 645 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 682
H N ++ L SPV S K + Q+G +P
Sbjct: 585 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 623
Score = 188 (71.2 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 636 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 694
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 695 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 744
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 745 VFYNLVFMQKLKTNILQ 761
Score = 75 (31.5 bits), Expect = 6.7e-24, Sum P(3) = 6.7e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 737 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 781
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP++V A +N+Y+SPL++
Sbjct: 782 QFSNSPRRVPAGNNIYISPLKS 803
Score = 73 (30.8 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 258 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 313
Query: 342 TRNKGELDERVFINEDD 358
++D R+F++ D+
Sbjct: 314 YLKNKDIDARLFLDHDE 330
Score = 45 (20.9 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 SNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
S + + + IL V L DF+K + F +K P L+
Sbjct: 498 SAETDLSFPWILNVFDLKAFDFYKVIESF-IKVEPSLT 534
Score = 38 (18.4 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
LSP RS +G TS P +T+ T
Sbjct: 598 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 629
Score = 37 (18.1 bits), Expect = 7.3e-32, Sum P(3) = 7.3e-32
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 398 RSSASHPNGIAGGATSKMVVTPVS 421
RS + P G AG A+ PVS
Sbjct: 13 RSQRTSPEGGAGTASPPGGTAPVS 36
>UNIPROTKB|F1NAY3 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00592698
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AADN02005407
EMBL:AADN02005408 EMBL:AADN02005409 Ensembl:ENSGALT00000036484
ArrayExpress:F1NAY3 Uniprot:F1NAY3
Length = 920
Score = 263 (97.6 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 85/281 (30%), Positives = 136/281 (48%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 360 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 417
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
E G QG I ++ R + ++LYYRV+E+M +E + L N + LL +
Sbjct: 418 AE--AVG--QGCA---EIGSQASRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNI 470
Query: 537 FHRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHE 585
FH +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 471 FHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVE 530
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--L 643
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L
Sbjct: 531 PSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTL 583
Query: 644 DAIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 682
+ H N ++ L SPV S K + Q+G +P
Sbjct: 584 NLPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 623
Score = 188 (71.2 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 636 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 694
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 695 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 744
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 745 VFYNLVFMQKLKTNILQ 761
Score = 75 (31.5 bits), Expect = 7.1e-24, Sum P(3) = 7.1e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 737 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 781
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP++V A +N+Y+SPL++
Sbjct: 782 QFSNSPRRVPAGNNIYISPLKS 803
Score = 73 (30.8 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 256 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 311
Query: 342 TRNKGELDERVFINEDD 358
++D R+F++ D+
Sbjct: 312 YLKNKDIDARLFLDHDE 328
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 SNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
S + + + IL V L DF+K + F +K P L+
Sbjct: 498 SAETDLSFPWILNVFDLKAFDFYKVIESF-IKVEPSLT 534
Score = 38 (18.4 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
LSP RS +G TS P +T+ T
Sbjct: 598 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 629
>UNIPROTKB|Q90600 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0019048 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030
Pfam:PF08934 HSSP:P06400 EMBL:X72218 EMBL:U00113 EMBL:X72217
IPI:IPI00592698 PIR:S45298 RefSeq:NP_989750.1 UniGene:Gga.2986
ProteinModelPortal:Q90600 SMR:Q90600 STRING:Q90600 GeneID:386582
KEGG:gga:386582 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 NextBio:20813945 InterPro:IPR015652
PANTHER:PTHR13742:SF10 Uniprot:Q90600
Length = 921
Score = 263 (97.6 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 363 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 420
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 421 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 472
Query: 538 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 586
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 473 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 532
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 644
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 533 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 585
Query: 645 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 682
H N ++ L SPV S K + Q+G +P
Sbjct: 586 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 624
Score = 188 (71.2 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 637 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 695
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 696 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 745
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 746 VFYNLVFMQKLKTNILQ 762
Score = 75 (31.5 bits), Expect = 7.2e-24, Sum P(3) = 7.2e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 738 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 782
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP++V A +N+Y+SPL++
Sbjct: 783 QFSNSPRRVPAGNNIYISPLKS 804
Score = 73 (30.8 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 259 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 314
Query: 342 TRNKGELDERVFINEDD 358
++D R+F++ D+
Sbjct: 315 YLKNKDIDARLFLDHDE 331
Score = 45 (20.9 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 SNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
S + + + IL V L DF+K + F +K P L+
Sbjct: 499 SAETDLSFPWILNVFDLKAFDFYKVIESF-IKVEPSLT 535
Score = 38 (18.4 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
LSP RS +G TS P +T+ T
Sbjct: 599 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 630
>UNIPROTKB|F1NAY1 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0031134 "sister chromatid
biorientation" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0034088 "maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0035189 "Rb-E2F complex"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0043550 "regulation of lipid kinase activity" evidence=IEA]
[GO:0045445 "myoblast differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051146 "striated
muscle cell differentiation" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0071922 "regulation of cohesin
localization to chromatin" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0071459 GO:GO:0050680
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0035189 GO:GO:0034088
GO:GO:0071930 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AADN02005407 EMBL:AADN02005408 EMBL:AADN02005409
IPI:IPI00819754 Ensembl:ENSGALT00000036486 ArrayExpress:F1NAY1
Uniprot:F1NAY1
Length = 962
Score = 263 (97.6 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 85/280 (30%), Positives = 137/280 (48%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV AM T + L ++ KPS L + +C + +++R L IF
Sbjct: 416 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVES-LGHIFKKK-F 473
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E G QG I +++ +L ++LYYRV+E+M +E + L N + LL + F
Sbjct: 474 AE--AVG--QGCA---EIGSQRYQL-GVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIF 525
Query: 538 HRCMLACSAELVLATH-KTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEE 586
H +LAC+ E+V+AT+ +T + + FP +L + AFD KVIESFI+ E
Sbjct: 526 HTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEP 585
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS--LD 644
SL R++ +HL E R++ES+ W+ S +++ + ++ R G P P+ L+
Sbjct: 586 SLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGQTDQPEPTSTLN 638
Query: 645 AIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPKRP 682
H N ++ L SPV S K + Q+G +P
Sbjct: 639 LPLQH-NHTAADLYLSPVRSPKKKASGHPQSGTSNPDAQP 677
Score = 188 (71.2 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 41/137 (29%), Positives = 78/137 (56%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI
Sbjct: 690 TSLSLFYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQI 748
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y++ P + F+ V + R EQ + II
Sbjct: 749 MMCSMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI---------REEQ-YDSII 798
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 799 VFYNLVFMQKLKTNILQ 815
Score = 75 (31.5 bits), Expect = 8.8e-24, Sum P(3) = 8.8e-24
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ + II FYN +F+ +K +++ +NR ++ P P P+ P
Sbjct: 791 EEQYDSIIVFYNLVFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PY 835
Query: 911 LPDMSPKKVSATHNVYVSPLRT 932
SP++V A +N+Y+SPL++
Sbjct: 836 QFSNSPRRVPAGNNIYISPLKS 857
Score = 73 (30.8 bits), Expect = 1.8e-35, Sum P(3) = 1.8e-35
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXX--XNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + ++L K YD
Sbjct: 312 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 367
Query: 342 TRNKGELDERVFINEDD 358
++D R+F++ D+
Sbjct: 368 YLKNKDIDARLFLDHDE 384
Score = 45 (20.9 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 99 SNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
S + + + IL V L DF+K + F +K P L+
Sbjct: 552 SAETDLSFPWILNVFDLKAFDFYKVIESF-IKVEPSLT 588
Score = 38 (18.4 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
LSP RS +G TS P +T+ T
Sbjct: 652 LSPVRSPKKKASGHPQSGTSNPDAQPSATSQT 683
>UNIPROTKB|F1MD46 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:DAAA02032883
EMBL:DAAA02032882 EMBL:DAAA02032884 EMBL:DAAA02032885
IPI:IPI00703019 UniGene:Bt.47780 Ensembl:ENSBTAT00000008728
Uniprot:F1MD46
Length = 928
Score = 260 (96.6 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 82/282 (29%), Positives = 142/282 (50%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV T M T + L ++ +PS L + +C + +++R I + +F
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKDSILKRVKDIGD-VFK---- 427
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E+ QG M+ I +++ +L ++LYYRV+E+M +E + L +N + LL + F
Sbjct: 428 -EKFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIF 482
Query: 538 HRCMLACSAELVLATHK--------TVTML-FPAVLERTGITAFDLSKVIESFIRHEESL 588
H +LAC+ E+V+AT+ T T L FP +L + AFD KVIESFI+ E +L
Sbjct: 483 HMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAEANL 542
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIAT 648
RE+ +HL E R++ES+ W S +++ + A+ ++ +P +L+ +
Sbjct: 543 TREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKD-REGPVDHF----EPACTLN-LPL 596
Query: 649 HINFSSGG--LSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
N ++ LSPV S K +P N S + + +++
Sbjct: 597 QNNHTAADMYLSPVRSPKKKGPTPRVNSTPNSEAQATSAFQT 638
Score = 192 (72.6 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 703
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 704 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 753
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 754 VFYNSVFMQRLKTNILQ 770
Score = 67 (28.6 bits), Expect = 5.1e-35, Sum P(3) = 5.1e-35
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 268 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVENLSKQYEE 323
Query: 341 ATRNKGELDERVFINED 357
+LD R+F++ D
Sbjct: 324 IYLKNKDLDARLFLDHD 340
Score = 61 (26.5 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 909
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 746 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 793
Query: 910 ALPDMSPKKVSATHNVYVSPL 930
SP ++ N+Y+SPL
Sbjct: 794 ----SSPLRIPGG-NIYISPL 809
Score = 41 (19.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 109 ILRVMKLNIVDFFKELPQFL 128
IL V L DF+K + F+
Sbjct: 517 ILNVFNLKAFDFYKVIESFI 536
Score = 40 (19.1 bits), Expect = 3.2e-32, Sum P(3) = 3.2e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 260 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 294
Score = 39 (18.8 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 631
FDL K I++ + + ++ R L+++ N L L S + +Y LT +S EIN
Sbjct: 132 FDLLKEIDTSTKVDNAMSRLLKKY-NVL--CALYSKLERTCELIY--LTQPSSSISTEIN 186
Query: 632 RLGLL 636
+ +L
Sbjct: 187 SMLVL 191
>MGI|MGI:97874 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10090 "Mus musculus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IMP]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO;IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016605 "PML body" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0019900 "kinase
binding" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031134 "sister chromatid biorientation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=ISO] [GO:0035189 "Rb-E2F complex" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0042551 "neuron maturation" evidence=IMP] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IGI] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO] [GO:0045445
"myoblast differentiation" evidence=ISO] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IGI] [GO:0045786
"negative regulation of cell cycle" evidence=IMP] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=ISO] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IMP;IDA] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048667 "cell morphogenesis involved
in neuron differentiation" evidence=IMP] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IMP]
[GO:0051146 "striated muscle cell differentiation" evidence=IGI]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0051301
"cell division" evidence=IMP] [GO:0051402 "neuron apoptotic
process" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IGI] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 MGI:MGI:97874
GO:GO:0007265 GO:GO:0051301 GO:GO:0005819 GO:GO:0006469
GO:GO:0016605 GO:GO:0045944 GO:GO:0051402 GO:GO:0007050
GO:GO:0006351 GO:GO:0016568 GO:GO:0019900 GO:GO:0001047
GO:GO:0008134 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0050680 GO:GO:0035914 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0035189 GO:GO:0043353
GO:GO:0034088 GO:GO:0071930 GO:GO:0048667 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925
HOGENOM:HOG000136539 HOVERGEN:HBG008967 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:M26391 EMBL:DQ400415 EMBL:BC096525
IPI:IPI00121418 PIR:A33718 RefSeq:NP_033055.2 UniGene:Mm.273862
ProteinModelPortal:P13405 SMR:P13405 DIP:DIP-37637N IntAct:P13405
MINT:MINT-225292 STRING:P13405 PhosphoSite:P13405 PaxDb:P13405
PRIDE:P13405 Ensembl:ENSMUST00000022701 GeneID:19645 KEGG:mmu:19645
InParanoid:Q4VA62 NextBio:296890 Bgee:P13405 CleanEx:MM_RB1
Genevestigator:P13405 GermOnline:ENSMUSG00000022105 Uniprot:P13405
Length = 921
Score = 264 (98.0 bits), Expect = 5.9e-35, Sum P(3) = 5.9e-35
Identities = 67/213 (31%), Positives = 113/213 (53%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA----HIILEAIFP 473
TPV T M T + L ++ +PS L + +C + ++++R HI E
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKF-- 424
Query: 474 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
++ +G+ CV +I ++ +L ++LYYRV+E+M +E + L +N + LL
Sbjct: 425 ANAVGQGCV-----------DIGVQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLN 472
Query: 534 NERFHRCMLACSAELVLATHKTVTML---------FPAVLERTGITAFDLSKVIESFIRH 584
+ FH +LAC+ E+V+AT+ T+ FP +L + AFD KVIESFI+
Sbjct: 473 DNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKV 532
Query: 585 EESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
E +L RE+ +HL E R++ES+ W S +++
Sbjct: 533 EANLTREMIKHLERCEHRIMESLAWLSDSPLFD 565
Score = 189 (71.6 bits), Expect = 5.9e-35, Sum P(3) = 5.9e-35
Identities = 67/272 (24%), Positives = 118/272 (43%)
Query: 658 SPVHSLHKHETSPGQNGDIRSPKRPCT-DYRSVLVERNNFTSPVKD-RXXXXXXXXXXXX 715
SP+ L K ++ G+ D P P + + + + SP++ +
Sbjct: 561 SPLFDLIK-QSKDGEGPDNLEPACPLSLPLQGNHTAADMYLSPLRSPKKRTSTTRVNSAA 619
Query: 716 XXXXQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRE 773
Q+A A T+ + T + +F+ K+ +LA +R+N + RL LS ++
Sbjct: 620 NTETQAASAFHTQ-------KPLKSTSLALFYKKVYRLAYLRLNTLCARL-LSDHPELEH 671
Query: 774 SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQV 833
++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P +
Sbjct: 672 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQET 731
Query: 834 FRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH 893
F+ V + E++ II FYN +F+ +K +++ A T T +S + H
Sbjct: 732 FKRVLI----------REEEFDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH 777
Query: 894 NNDGPCPGSPKVSVFPA-----LPDMSPKKVS 920
P S P P SP K+S
Sbjct: 778 IPRSPYKFSSSPLRIPGGNIYISPLKSPYKIS 809
Score = 65 (27.9 bits), Expect = 5.9e-35, Sum P(3) = 5.9e-35
Identities = 18/77 (23%), Positives = 34/77 (44%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L K Y+
Sbjct: 262 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEE 317
Query: 341 ATRNKGELDERVFINED 357
+LD R+F++ D
Sbjct: 318 VYLKNKDLDARLFLDHD 334
Score = 61 (26.5 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 909
E++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 739 EEEFDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 786
Query: 910 ALPDMSPKKVSATHNVYVSPLRT 932
SP ++ N+Y+SPL++
Sbjct: 787 ----SSPLRIPGG-NIYISPLKS 804
Score = 46 (21.3 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 95 LQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL 128
LQ + + + IL V+ L DF+K + F+
Sbjct: 497 LQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFI 530
Score = 43 (20.2 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH-NVYVSPLRTSK 934
+ + DG P + + PA P P + + T ++Y+SPLR+ K
Sbjct: 567 IKQSKDGEGPDNLE----PACPLSLPLQGNHTAADMYLSPLRSPK 607
Score = 43 (20.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 631
FDL K I++ + + ++ R L+++ N L L S + +Y LT LS EIN
Sbjct: 126 FDLLKEIDTSTKVDNAMSRLLKKY-NVL--CALYSKLERTCELIY--LTQPSSALSTEIN 180
Query: 632 RLGLL 636
+ +L
Sbjct: 181 SMLVL 185
Score = 40 (19.1 bits), Expect = 2.3e-32, Sum P(3) = 2.3e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 254 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 288
>RGD|3540 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10116 "Rattus norvegicus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=IEA;ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO;ISS] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0007265 "Ras protein signal
transduction" evidence=IEA;ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO;ISS] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019900 "kinase binding"
evidence=ISO;ISS] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0031134 "sister chromatid biorientation" evidence=IEA;ISO]
[GO:0031175 "neuron projection development" evidence=IEA;ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA;ISO] [GO:0035189 "Rb-E2F complex" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0042551 "neuron maturation" evidence=IEA;ISO] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA;ISO] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO;ISS] [GO:0045445
"myoblast differentiation" evidence=ISO;ISS] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IEA;ISO]
[GO:0045786 "negative regulation of cell cycle" evidence=ISO]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA;ISO] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048565 "digestive tract development"
evidence=IEA;ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA;ISO] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA;ISO] [GO:0051146
"striated muscle cell differentiation" evidence=IEA;ISO] [GO:0051219
"phosphoprotein binding" evidence=IEA;ISO] [GO:0051301 "cell
division" evidence=IEA;ISO] [GO:0051402 "neuron apoptotic process"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA;ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=IEA;ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA;ISO] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 RGD:3540 GO:GO:0007265
GO:GO:0051301 GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 GO:GO:0045944
GO:GO:0051402 GO:GO:0007050 GO:GO:0006351 GO:GO:0016568 GO:GO:0019900
GO:GO:0001047 GO:GO:0008134 GO:GO:0051146 GO:GO:0031175 GO:GO:0048565
GO:GO:0071459 GO:GO:0050680 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842 GO:GO:0045879
GO:GO:0042551 GO:GO:0035189 GO:GO:0043353 GO:GO:0034088 GO:GO:0071930
GO:GO:0048667 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030
Pfam:PF08934 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:D25233 EMBL:L07126 IPI:IPI00192561 PIR:S35544
RefSeq:NP_058741.1 UniGene:Rn.55115 IntAct:P33568 STRING:P33568
PhosphoSite:P33568 PRIDE:P33568 Ensembl:ENSRNOT00000021752
GeneID:24708 KEGG:rno:24708 UCSC:RGD:3540 InParanoid:P33568
NextBio:604187 Genevestigator:P33568 GermOnline:ENSRNOG00000016029
Uniprot:P33568
Length = 920
Score = 266 (98.7 bits), Expect = 1.5e-34, Sum P(3) = 1.5e-34
Identities = 69/214 (32%), Positives = 115/214 (53%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA----HIILEAIFP 473
TPV T M T + L ++ +PS L + +C + ++++R HI E
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKF-- 423
Query: 474 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+S +G+ C+ +I A++ +L ++LYYRV+E+M +E + L +N + LL
Sbjct: 424 ASAVGQGCI-----------DIGAQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLN 471
Query: 534 NERFHRCMLACSAELVLATHKTVTML----------FPAVLERTGITAFDLSKVIESFIR 583
+ FH +LAC+ E+V+AT+ +ML FP +L + AFD KVIESFI+
Sbjct: 472 DNIFHMSLLACALEVVMATYSR-SMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIK 530
Query: 584 HEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
E +L RE+ +HL E R++ES+ W S +++
Sbjct: 531 VEANLTREMIKHLERCEHRIMESLAWLSDSPLFD 564
Score = 191 (72.3 bits), Expect = 1.5e-34, Sum P(3) = 1.5e-34
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 637 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLENEYELMKDRHLDQI 695
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E++ II
Sbjct: 696 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSII 745
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA-----LPD 913
FYN +F+ +K +++ A T T +S + H P S P P
Sbjct: 746 VFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPHIPRSPYKFSSSPLRIPGGNIYISPL 801
Query: 914 MSPKKVS 920
SP K+S
Sbjct: 802 KSPYKIS 808
Score = 61 (26.5 bits), Expect = 4.1e-21, Sum P(3) = 4.1e-21
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 909
E++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 738 EEEFDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 785
Query: 910 ALPDMSPKKVSATHNVYVSPLRT 932
SP ++ N+Y+SPL++
Sbjct: 786 ----SSPLRIPGG-NIYISPLKS 803
Score = 57 (25.1 bits), Expect = 1.5e-34, Sum P(3) = 1.5e-34
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDNATRNKGELDERVFI 354
C+ EC + ++N+ I F + + + L K Y+ +LD R+F+
Sbjct: 271 CKEHECNVDEVKNVYFKNFIPFISSLGIVSSNGLPELESLSKRYEEVYLKSKDLDARLFL 330
Query: 355 NED 357
+ D
Sbjct: 331 DHD 333
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 93 ENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL 128
+NL G+ + + IL V+ L DF+K + F+
Sbjct: 497 QNLDSGT---DLSFPWILNVLNLKAFDFYKVIESFI 529
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 631
FDL K I++ + + ++ R L+++ N L L S + +Y LT LS EIN
Sbjct: 125 FDLLKEIDTSTKVDNAVSRLLKKY-NVL--CALYSKLERTCGLIY--LTQPSSGLSTEIN 179
Query: 632 RLGLL 636
+ +L
Sbjct: 180 SMLVL 184
Score = 38 (18.4 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ I LC ++ + D+++ + K
Sbjct: 253 SARIAKQLESDTRTIEVLCKEHECNVDEVKNVYFK 287
>UNIPROTKB|J9NU49 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AAEX03013115
EMBL:AAEX03013116 EMBL:AAEX03013117 EMBL:AAEX03013118
Ensembl:ENSCAFT00000045816 Uniprot:J9NU49
Length = 920
Score = 261 (96.9 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 68/215 (31%), Positives = 115/215 (53%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV T M T + L ++ +PS L + +C + +++R + IF
Sbjct: 365 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDV-GYIFK---- 419
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E+ QG M+ I +++ +L ++LYYRV+E+M +E + L +N + LL ++ F
Sbjct: 420 -EKFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIF 474
Query: 538 HRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESL 588
H +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 475 HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL 534
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 535 TREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 569
Score = 192 (72.6 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 637 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 695
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 696 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 745
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 746 VFYNSVFMQRLKTNILQ 762
Score = 63 (27.2 bits), Expect = 4.4e-21, Sum P(3) = 4.4e-21
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 909
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 738 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 785
Query: 910 ALPDMSPKKVSATHNVYVSPLR 931
SP ++ N+Y+SPL+
Sbjct: 786 ----SSPLRIPGG-NIYISPLK 802
Score = 60 (26.2 bits), Expect = 2.0e-34, Sum P(3) = 2.0e-34
Identities = 16/77 (20%), Positives = 33/77 (42%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L + Y+
Sbjct: 260 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSRQYEE 315
Query: 341 ATRNKGELDERVFINED 357
+ D R+F++ D
Sbjct: 316 IYLKNKDFDARLFLDHD 332
Score = 50 (22.7 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 88 SEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL 128
S +NL G+ + + IL V+ L DF+K + F+
Sbjct: 491 SRSTSQNLDTGT---DLSFPWILNVLNLKAFDFYKVIESFI 528
Score = 40 (19.1 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 252 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 286
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 572 FDLSKVIESFIRHEESLPRELRRH-----LNSLEERLLESMVWEKGSSMYNS 618
FDL K I++ + + ++ R L+++ L S ER E + + SS+ ++
Sbjct: 124 FDLLKEIDTSTKVDNAMSRLLKKYDVLCALYSKLERTCELIYLTQPSSLIST 175
>UNIPROTKB|F1PQ32 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AAEX03013115 EMBL:AAEX03013116 EMBL:AAEX03013117
EMBL:AAEX03013118 Ensembl:ENSCAFT00000007150 Uniprot:F1PQ32
Length = 928
Score = 245 (91.3 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 66/215 (30%), Positives = 113/215 (52%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV T M T + L ++ +PS L + +C + +++R + IF
Sbjct: 376 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDV-GYIFK---- 430
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E+ QG M+ I +++ +L ++LYYRV+E+M + + +N + LL ++ F
Sbjct: 431 -EKFAKAVGQGC--ME-IGSQRYKL-GVRLYYRVMESMLKSRLSI---QNFSKLLNDDIF 482
Query: 538 HRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESL 588
H +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 483 HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL 542
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 543 TREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 577
Score = 192 (72.6 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 645 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 703
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 704 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 753
Query: 859 TFYNKIFVPAVKPLLVE 875
FYN +F+ +K +++
Sbjct: 754 VFYNSVFMQRLKTNILQ 770
Score = 63 (27.2 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFP 909
E+++ II FYN +F+ +K +++ A T T +S + H P SP K S
Sbjct: 746 EEEYDSIIVFYNSVFMQRLKTNILQY--ASTRPPT--LSPIPH-----IPRSPYKFS--- 793
Query: 910 ALPDMSPKKVSATHNVYVSPLR 931
SP ++ N+Y+SPL+
Sbjct: 794 ----SSPLRIPGG-NIYISPLK 810
Score = 60 (26.2 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 16/77 (20%), Positives = 33/77 (42%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNI--LEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + + L + Y+
Sbjct: 271 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSRQYEE 326
Query: 341 ATRNKGELDERVFINED 357
+ D R+F++ D
Sbjct: 327 IYLKNKDFDARLFLDHD 343
Score = 50 (22.7 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 88 SEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL 128
S +NL G+ + + IL V+ L DF+K + F+
Sbjct: 499 SRSTSQNLDTGT---DLSFPWILNVLNLKAFDFYKVIESFI 536
Score = 40 (19.1 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
S+R K+ +I LC ++ + D+++ + K
Sbjct: 263 SARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFK 297
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 572 FDLSKVIESFIRHEESLPRELRRH-----LNSLEERLLESMVWEKGSSMYNS 618
FDL K I++ + + ++ R L+++ L S ER E + + SS+ ++
Sbjct: 135 FDLLKEIDTSTKVDNAMSRLLKKYDVLCALYSKLERTCELIYLTQPSSLIST 186
>UNIPROTKB|F5H837 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 InterPro:IPR024599 Pfam:PF11934
HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342 IPI:IPI01011272
Ensembl:ENST00000544405 ArrayExpress:F5H837 Bgee:F5H837
Uniprot:F5H837
Length = 639
Score = 341 (125.1 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 145/569 (25%), Positives = 253/569 (44%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + + +L IL+ + ++++FF ++ K
Sbjct: 12 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKM-----KKWED 63
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++N+ + R E L+ NF +++ K Y+ I+++ F P G KQ
Sbjct: 64 MANL-PPHFRERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 120
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----V 237
T +S+ F W+LF+ + + F D L+ C LV A+ + V
Sbjct: 121 CT---VSEIFHFCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELV 176
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + ++ K S+ +I LCS++D + + I E I + +KK
Sbjct: 177 NPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKL 236
Query: 297 CEASECKSENLENIDTDGLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINE 356
+ E ENL G + E+ + K Y+ + G LDER+F+ E
Sbjct: 237 LKGKE---ENLTGFLEPGN-FGESFKA----------INKAYEEYVLSVGNLDERIFLGE 282
Query: 357 DDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSPLSPH--RSSA---SHP-NGIAGG 410
D +N + + +K I L H +S A S P G+
Sbjct: 283 D--AEEEIGTLSRCLNAGSGTETAERVQ--MKNI---LQQHFDKSKALRISTPLTGVRYI 335
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 336 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 394
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
I+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 395 IYSQHFQPDE------DFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 447
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 448 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCR 506
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 507 EVVKHLNQIEEQILDHLAWKPESPLWEKI 535
>UNIPROTKB|F1NEZ1 [details] [associations]
symbol:F1NEZ1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 EMBL:AADN02038292 EMBL:AADN02038287
EMBL:AADN02038288 EMBL:AADN02038289 EMBL:AADN02038290
EMBL:AADN02038291 IPI:IPI00820273 Ensembl:ENSGALT00000039692
Uniprot:F1NEZ1
Length = 1120
Score = 293 (108.2 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 88/293 (30%), Positives = 144/293 (49%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ K Y+ + G LDER+F+ ED +N A V+ +
Sbjct: 333 INKAYEEYVLSVGNLDERIFLGED--ADEEIGTLTRCLNTPSGMET----AERVQ-VKHN 385
Query: 394 LSPHRSSASHPN---GIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 447
L H + P + G S VTPVS A + L T++ L + PS LE+
Sbjct: 386 LQQHFDRSKSPRVTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 445
Query: 448 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALK 506
++C +D + + R + E ++ S E + +NL ++ ++ RR E L
Sbjct: 446 IFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRRAEVL- 497
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 566
YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP + E
Sbjct: 498 -YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEI 555
Query: 567 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
I + KVIE FIR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 556 FDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 608
Score = 82 (33.9 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
+P +S +P++ SP++V S H VY+SP + + AL SH K +Y + S
Sbjct: 1012 TPPLSPYPSVRISSPRRVQLSQNHAVYISPHKN--VSAL-SHREKIFY-------YFSSS 1061
Query: 960 PSKDLTDINHRLNSNR---RVRGTL 981
PSK L +IN + + + RG L
Sbjct: 1062 PSKRLKEINSMIRTGETPTKKRGIL 1086
Score = 62 (26.9 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 847 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
S E++ D+I FYN I++ +K ++ +GT
Sbjct: 976 SDTEEEERGDLIQFYNSIYIEQIKEFALKYTSSGT 1010
Score = 40 (19.1 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 767 LSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYN 822
LS Q+ + L Q+ Q + R Q+I K+ L+L FR+++++
Sbjct: 789 LSTQMSGATMQLPGQVTVQHITSGEPRPAQQLIAATATRSRKMGSLSLFFRKVLFS 844
>FB|FBgn0015799 [details] [associations]
symbol:Rbf "Retinoblastoma-family protein" species:7227
"Drosophila melanogaster" [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051101
"regulation of DNA binding" evidence=IDA] [GO:0051726 "regulation
of cell cycle" evidence=ISS;IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008156 "negative regulation of DNA
replication" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007307 "eggshell
chorion gene amplification" evidence=TAS] [GO:0007113 "endomitotic
cell cycle" evidence=TAS] [GO:0042023 "DNA endoreduplication"
evidence=IMP] [GO:0031523 "Myb complex" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0045749 "negative regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007095 GO:GO:0043066 GO:GO:0008630
GO:GO:0008285 EMBL:AE014298 GO:GO:0000785 GO:GO:0006351
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 GO:GO:0007113
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 GO:GO:0008156 GO:GO:0051101 GO:GO:0042023
GO:GO:0031523 GO:GO:0007307 GO:GO:0071922 GO:GO:0035189
GO:GO:0034088 Reactome:REACT_118133 EMBL:AL031583 ChiTaRS:Rb97D
EMBL:AY047549 EMBL:AY089532 EMBL:X96975 PIR:T13480
RefSeq:NP_525036.2 UniGene:Dm.4654 ProteinModelPortal:Q24472
SMR:Q24472 IntAct:Q24472 STRING:Q24472 PaxDb:Q24472
EnsemblMetazoa:FBtr0070146 GeneID:31027 KEGG:dme:Dmel_CG7413
CTD:31027 FlyBase:FBgn0015799 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InParanoid:Q24472 KO:K04681
OMA:CCIDLIY OrthoDB:EOG47D7X2 PhylomeDB:Q24472 GenomeRNAi:31027
NextBio:771579 Bgee:Q24472 GermOnline:CG7413 InterPro:IPR024599
Pfam:PF11934 Uniprot:Q24472
Length = 845
Score = 189 (71.6 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQNIMCA 641
Query: 803 FYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
Y ++ ++ + F +I+ YR QPQ V+R VF+D + G E DII FY
Sbjct: 642 IYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFID---INEDG--EPKVKDIIHFY 696
Query: 862 NKIFVPAVKPLLVE 875
N +VP ++ +++
Sbjct: 697 NHTYVPLMRQFVID 710
Score = 169 (64.5 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 49/152 (32%), Positives = 81/152 (53%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 552
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 550
Query: 610 EKGSSMYNSLTVAR-PVLSAEINRLGLLADPM 640
+ S+++ + A+ P+ + + L A P+
Sbjct: 551 ARNSTVWEMIASAQLPLPTWLMVNLDRAAGPL 582
Score = 91 (37.1 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 38/149 (25%), Positives = 69/149 (46%)
Query: 830 KPQVFRSVFVD-WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRV 888
+PQ SV+ + + + G E DII FYN +VP ++ +++ T + R
Sbjct: 666 QPQAVNSVYREVFIDINEDG--EPKVKDIIHFYNHTYVPLMRQFVIDYLNV-TPDVSGRA 722
Query: 889 SEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYA 948
S++ ++S P PKKV+ +H+++VS + SK + S + Y
Sbjct: 723 SDL------------QLSPHPKERAAQPKKVTQSHSLFVSQM--SKNEIQQSPNQMVYSF 768
Query: 949 CVGESTHAYQSPSKDLTDINHRLNSNRRV 977
C +SP+KDL +N ++ +R+
Sbjct: 769 C--------RSPAKDLQAMNEKVRGGKRM 789
Score = 68 (29.0 bits), Expect = 3.6e-25, Sum P(3) = 3.6e-25
Identities = 85/376 (22%), Positives = 138/376 (36%)
Query: 26 ARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV- 84
A T+LC++ L++D T + + + E S G W +Y
Sbjct: 30 AEYTNLCRD-LNMDRQTELQGYETYLEVSQ----RCSMEGTAS------HWMCCAIYTAC 78
Query: 85 RRLSEKN--GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
RR S G+N N N ++LR K++I +F ++ Q+ ++N+ +
Sbjct: 79 RRTSTPTVTGQNAVVKGNCVSLN--NLLRCCKMSIYEFKTKIKQWCD-----MANL-PQE 130
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYIS----DYH 198
+ N +E +L F +L K + RI + N K S S G + Y
Sbjct: 131 FVNEIE--DLDRKFSITFMLHKRF-RIIMDMIFSCPPNEKKHSKYISLHGNHAHGKCSYI 187
Query: 199 RFG---WLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKK 255
+ W LFL + S DLVT N ++ + ++ +V R I+ +
Sbjct: 188 KLDDICWRLFLCAKNQKPSNTVDLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFEGLPS 247
Query: 256 SNKGVDLIAS----LCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENID 311
+ +D + L + D +E+ K M+ T I+ +AS N D
Sbjct: 248 NWTELDFRHNPHCILSNFCDMTEE--AKAMKATT--FRQIMSSF-FQASTIYG----NKD 298
Query: 312 TD-GLIYFENLMXXXXXXXXXNILEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXA 370
T GL+ EN NI Y+ + GE DER+ D
Sbjct: 299 TMLGLLANENF---ERNLKSLNI---SYEQYVLSVGEFDERILSAYDAGEHTALNDQSLR 352
Query: 371 VNITGAKRKFDSLASP 386
+T RK D A P
Sbjct: 353 PPVTPLTRKQDLPAQP 368
>DICTYBASE|DDB_G0290551 [details] [associations]
symbol:rblA "retinoblastoma-like protein"
species:44689 "Dictyostelium discoideum" [GO:0045165 "cell fate
commitment" evidence=IGI] [GO:0010628 "positive regulation of gene
expression" evidence=IMP] [GO:0051330 "G1 phase of meiotic cell
cycle" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=ISS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 dictyBase:DDB_G0290551
GenomeReviews:CM000154_GR GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0045786
EMBL:AAFI02000164 GO:GO:0030332 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 EMBL:AB211596 RefSeq:XP_635645.1
ProteinModelPortal:Q54FX2 EnsemblProtists:DDB0232004 GeneID:8627717
KEGG:ddi:DDB_G0290551 InParanoid:Q54FX2 OMA:AWCLLEN GO:GO:0051330
Uniprot:Q54FX2
Length = 1312
Score = 199 (75.1 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 54/214 (25%), Positives = 101/214 (47%)
Query: 408 AGGATSKMVVTPVSTAMTTAKWLRTVICPLPS-KPSAELERFLKSCDK-DVTTDVMRRAH 465
AG S + TP+S +T WL+ I PS L LKS D+ T++V +
Sbjct: 618 AGNLGSVIPQTPISLTLTLESWLKVEIQNYRDPNPSLNLINILKSADQPQQTSEVDKMIE 677
Query: 466 IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHA 525
+ + L Q ++R+ A++LYY +LE + E +
Sbjct: 678 RVSSLTNNTDSLFSIGGIDDHQQQQQQQQEVKQRRKNMAIQLYYCLLEKLIKFEQNT--S 735
Query: 526 KNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHE 585
N+ LL +E FH+ +L+ S E++ +K + FP + + F ++I+ ++ +
Sbjct: 736 SNINVLLNHEDFHKSLLSNSFEIIAYVYKMEGLYFPHFINVFKLHPFSYLRLIDLVLKVD 795
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
LP+ L +H + +EE++LE VW S++++++
Sbjct: 796 ADLPKLLAQHFSQIEEKILEKYVWSNNSTVFSTI 829
Score = 120 (47.3 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
I F K++ L + ++ + LS +Y + +IL T LF NR ID +++C
Sbjct: 890 IQNFIKKVSTLIIAKCRKLIHAMGLSSDYVVQIYQVMIKILIDETLLFKNREIDVLLICS 949
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQC-KPQVFRSVFV 839
Y + K++ N+TF+ II C +V++ V++
Sbjct: 950 IYAICKVNSKNITFKAII-----DKSCISAKVYKEVYI 982
Score = 80 (33.2 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 51/254 (20%), Positives = 101/254 (39%)
Query: 112 VMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYR 171
+ L + + F+E + L +S L+N+Y + N++ + +Y
Sbjct: 284 ISNLRLGNAFEEQGRQLEQSFNTLNNLYRKYEQIFFTLFHPTENYILKTTQQHNYNNNSN 343
Query: 172 EFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFK-DLVTCTNGLVSIL 230
++ N + + + Y+ GWL+FL + F++ D V + L+ I+
Sbjct: 344 NNNNNNNNNNNNNNNNRTNEDYLLS---IGWLIFLFCKNKLFTKDSPDFVQSLHLLLCII 400
Query: 231 AILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-----TN 285
+ ++ + I + + + G D++ L + DDL + + +N
Sbjct: 401 NFIYVNTSISELK-KIPQGVQIIDTAT-G-DILLYLAKSIPCNLDDLSNVNQNIFSTYSN 457
Query: 286 TLIAD-ILKKKPCEASECKSENLENIDTDGL-IYFENLMXXXXXXXXXNILEKDYDNATR 343
LI + ILK + + N N ++DG+ F N N L K Y+
Sbjct: 458 LLINNSILKLFDNNNNNNNNNNNNNNNSDGIKSIFNN---SSIIKDNYNSLNKSYELYYY 514
Query: 344 NKGELDERVFINED 357
G++DER+F + D
Sbjct: 515 ANGDIDERLFYSFD 528
Score = 57 (25.1 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 856 DIITFYNKIFVPAVKPLLVEL 876
DII FYNKIF+ + P + E+
Sbjct: 1029 DIILFYNKIFLTKMDPYIHEV 1049
Score = 56 (24.8 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 27/95 (28%), Positives = 37/95 (38%)
Query: 881 TAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALIS 940
T K + N NN+ P S + + P S V +SP+ K IS
Sbjct: 1087 TPTKNQNNNPYNSNNNTPNKFSSSIPLSPQKGVNYNSSFSVNSMVTISPM---KQHTPIS 1143
Query: 941 HSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR 975
SS +Y +SPSK+L IN LN +
Sbjct: 1144 -SSYTYIVA--------KSPSKELFQINQCLNKKK 1169
Score = 55 (24.4 bits), Expect = 8.1e-10, Sum P(6) = 8.1e-10
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 379 KFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLP 438
++ SL P T T+P S + SS+S G G + TP S +++ L +VI P
Sbjct: 574 QYSSLLPP-STPTTP-SRYGSSSSSGGGGGGNLRKNIYGTP-SKSLSAGN-LGSVIPQTP 629
Query: 439 SKPSAELERFLK 450
+ LE +LK
Sbjct: 630 ISLTLTLESWLK 641
Score = 45 (20.9 bits), Expect = 4.6e-05, Sum P(5) = 4.6e-05
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 560
+L L S+ T+E+F + ++ACS + K ++L+
Sbjct: 125 LLENMQLVSVDTSEQFQKQIVACSL-FICGNKKFSSLLY 162
Score = 44 (20.5 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 11 SNNSESNAGDNDATEARLTDLCKNGLSV-DE 40
+NN+ +N +N+ E D+ N +++ DE
Sbjct: 52 NNNNNNNINNNENNENNNNDIINNKINLLDE 82
Score = 44 (20.5 bits), Expect = 1.5e-20, Sum P(5) = 1.5e-20
Identities = 18/96 (18%), Positives = 39/96 (40%)
Query: 11 SNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPE 70
+NN+ +N +N+ + + N + +N Y + K + + NG +
Sbjct: 471 NNNNNNNNNNNNNNSDGIKSIFNNSSIIKDN-YNSLNKSYE---------LYYYANGDID 520
Query: 71 EAERFWFAFVLYLVRRLSE-KNGENLQQGSNDNEFN 105
E + F +Y++ + +N N N+N +N
Sbjct: 521 ERLFYSFDHDIYVLNNNNNNQNNNNNNNNHNNNYYN 556
Score = 37 (18.1 bits), Expect = 6.1e-21, Sum P(5) = 6.1e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 886 NRVSEVNHNNDGPCPG 901
N +E N+NN+ P G
Sbjct: 1013 NNNNENNNNNNNPVKG 1028
>UNIPROTKB|B7Z913 [details] [associations]
symbol:RBL2 "cDNA FLJ53278, highly similar to
Retinoblastoma-like protein 2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
UniGene:Hs.513609 HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342
EMBL:AK304283 IPI:IPI00922321 SMR:B7Z913 STRING:B7Z913
Ensembl:ENST00000544545 UCSC:uc010vgw.2 Uniprot:B7Z913
Length = 518
Score = 277 (102.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 85/292 (29%), Positives = 141/292 (48%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ K Y+ + G LDER+F+ ED +N + + +K I
Sbjct: 118 INKAYEEYVLSVGNLDERIFLGED--AEEEIGTLSRCLNAGSGTETAERVQ--MKNI--- 170
Query: 394 LSPH--RSSA---SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 447
L H +S A S P G+ + VTPVSTA + L T++ L + PS +LE+
Sbjct: 171 LQQHFDKSKALRISTPLTGVRYIKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQ 230
Query: 448 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKL 507
L++C +D T + R + E I+ + +N I ++ R + L
Sbjct: 231 ILRTCSRDPTQAIANRLKEMFE-IYSQHFQPDE------DFSNCAKEIASKHFRFAEM-L 282
Query: 508 YYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERT 567
YY+VLE++ E + L +L+ +L + FHR +LAC E+V ++K FP + E
Sbjct: 283 YYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIF 341
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 342 DVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKI 393
Score = 62 (26.9 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 915 SPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN 972
SP+++ S H VY+SP K + ++S K +Y + SPSK L +IN +
Sbjct: 423 SPRRIQLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNSPSKRLREINSMIR 472
Query: 973 SNR---RVRGTL 981
+ + RG L
Sbjct: 473 TGETPTKKRGIL 484
>FB|FBgn0038390 [details] [associations]
symbol:Rbf2 "Retinoblastoma-family protein 2" species:7227
"Drosophila melanogaster" [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0001078 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IPI] [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0031523 "Myb complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 EMBL:AE014297
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0031523 GO:GO:0035189
GeneTree:ENSGT00530000063235 KO:K04681 InterPro:IPR024599
Pfam:PF11934 HSSP:P06400 FlyBase:FBgn0038390 EMBL:AF197059
EMBL:AY071301 RefSeq:NP_524372.1 UniGene:Dm.2418 SMR:Q9VF04
IntAct:Q9VF04 STRING:Q9VF04 EnsemblMetazoa:FBtr0083213 GeneID:41941
KEGG:dme:Dmel_CG5083 UCSC:CG5083-RA CTD:41941 InParanoid:Q9VF04
OMA:ICLRKFY GenomeRNAi:41941 NextBio:826382 Uniprot:Q9VF04
Length = 783
Score = 157 (60.3 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 490 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELV 549
+ +D + +R +A LYY+ L+ + E + L+ + +LAC EL
Sbjct: 407 DFLDAELSGKRFRQARGLYYKYLQKILGPELVQKPQLKIGQLMKQRKLTAALLACCLELA 466
Query: 550 LATH-KTVTML-FPAVLERTGITAFDLSKVIESFIRHEES-LPRELRRHLNSLEERLLES 606
L H K V L FP VL + A+D K++E +R++ L REL +HL+ +EE L+S
Sbjct: 467 LHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELVVRYDHGFLGRELIKHLDVVEEMCLDS 526
Query: 607 MVWEKGSSMYNSLTVARP 624
+++ K S ++ L P
Sbjct: 527 LIFRKSSQLWWELNQRLP 544
Score = 142 (55.0 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 38/129 (29%), Positives = 66/129 (51%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
TG +I K LA R+ + + L L + + + + L NRH+DQ++L
Sbjct: 561 TGSSICLRKFYGLANRRLLLLCKSLCLVDSFPQIWHLAEHSFTLESSRLLRNRHLDQLLL 620
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
C + ++ +L+LTF II +YR+QP + +R V + +G++ DIITF
Sbjct: 621 CAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLG------NGQT----ADIITF 670
Query: 861 YNKIFVPAV 869
YN ++V ++
Sbjct: 671 YNSVYVQSM 679
Score = 97 (39.2 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 45/185 (24%), Positives = 79/185 (42%)
Query: 66 NGMP-EEAE-RFWFAFVLY--LVRRLSEKNGENLQQGSNDNEFNLC------HILRVMKL 115
NG+ EA+ + W +Y L R E++ + ++ N C +LR K+
Sbjct: 45 NGLSTSEADAQEWLCCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKM 104
Query: 116 NIVDFFKELPQFLVKSGPILSNIYGADWEN--RLEAKELQANFVHLSILSKSYKRIYREF 173
N+ F + + + + N EN +LE +EL+ S L + YK I+R
Sbjct: 105 NVSQFLRRMEHW----NWLTQN------ENTFQLEVEELRCRLGITSTLLRHYKHIFRSL 154
Query: 174 FLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHAFSRFKDLVTCTNGLVSILA 231
F+ D +A + + FGWLLFL +R + F+ +L+ LV +
Sbjct: 155 FVHPGKGADPGAA-----NHYQALYEFGWLLFLVIRNELPGFA-ITNLINGCQVLVCTMD 208
Query: 232 ILIIH 236
+L ++
Sbjct: 209 LLFVN 213
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
+RR S E+ LE+ + + S Y+ L + ++E
Sbjct: 14 VRRFSVSCEQLELEARIQQSALSTYHRLDAVNGLSTSE 51
>ZFIN|ZDB-GENE-040428-1 [details] [associations]
symbol:rb1 "retinoblastoma 1" species:7955 "Danio
rerio" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IMP] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 ZFIN:ZDB-GENE-040428-1 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031290 GO:GO:0021554 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:CU694531 IPI:IPI00501767 Ensembl:ENSDART00000024309
ArrayExpress:F1Q9D6 Bgee:F1Q9D6 Uniprot:F1Q9D6
Length = 903
Score = 160 (61.4 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 76/286 (26%), Positives = 132/286 (46%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP--SS 475
TP+ AMT+ + LR + +PS+ L + K+C D + ++ +R + E +
Sbjct: 359 TPIRAAMTSIQQLRGDLTSGSDQPSSNLLVYYKNCTVDPSGEIKKRVEELGEVFIQRFAQ 418
Query: 476 GLGERCV-TGSLQ---GANL----MDNIW-AEQRRLEALKLYYRVLE------AMCTAEA 520
+G+ C G + GA L M+++ +E++RL +++ + ++L ++
Sbjct: 419 AVGQHCEGLGRKRFYLGAQLYYKVMESMLKSEEKRL-SVQNFSKLLNNAAFHTSLLACAL 477
Query: 521 QVLHAKNLTSLLTNERFHRCMLAC-SAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 579
+V+ A + S L N F R A S E L FP +L + AFD KVIE
Sbjct: 478 EVVIATYVGSSLKNGGFGRSSGASDSVESDLC--------FPWILSVFQLPAFDFYKVIE 529
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADP 639
SFI+ E +L ++ +HL E ++ES+ W S +++ L +R E A+P
Sbjct: 530 SFIKAEPTLKHDMVKHLEQCEHVIMESLAWRADSPLFDLLKQSREEGPGE------QAEP 583
Query: 640 MPSLDAIATHINFSSGGL--SPVHSLHKH---ETSPGQNGDIRSPK 680
+L+ H N ++ L SPV + E P G R+P+
Sbjct: 584 PATLNQ-PLHHNHTAADLYLSPVRPCRQPPVMEAEPPTPGT-RAPR 627
Score = 157 (60.3 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 45/203 (22%), Positives = 89/203 (43%)
Query: 731 PGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSL 789
P G +++F+ K+ ++A +R+ + L S ++ ++ L Q L L
Sbjct: 619 PTPGTRAPRSNSLSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPIIWTLLQHTLQNEYEL 678
Query: 790 FFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGR 849
+RH+DQ+I+ Y + K+ ++L F+ I+ Y++ P + F+ V +
Sbjct: 679 MRDRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETFKRVLI---------- 728
Query: 850 SEQDHVDIITFYNKIFVPAVKPLLVELG-PAGTAMKTNRVSEVNHNNDGPC--PGSPKVS 906
E + II FYN +F+ +K +++ P + + + P PGS V
Sbjct: 729 REGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPHIPCSPYKNSPLRVPGSNNVY 788
Query: 907 VFPALPD-MSPKKVSATHNVYVS 928
V P +SP ++ + +S
Sbjct: 789 VSPLKSSRVSPLVMTPRSRILIS 811
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 883 MKTNRVSEVNHNNDGPCPGSPKVSVFPALP-DMSPKKVSATHNVYVSPLRTSKMDALISH 941
+KTN + +++ P P SP + P P SP +V ++NVYVSPL++S++ L+
Sbjct: 748 LKTNILQ---YSSPRPPPLSP-IPHIPCSPYKNSPLRVPGSNNVYVSPLKSSRVSPLVMT 803
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSN 974
+GES + S K IN ++S+
Sbjct: 804 PRSRILISIGES---FGSADK-FQKINQMVSSS 832
Score = 68 (29.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 43 YKEIIKLFR-ETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL--SEKNGE-NLQQG 98
YK + + + E K L + N S + N A + + + S KNG G
Sbjct: 440 YKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGRSSG 499
Query: 99 SNDN-EFNLCH--ILRVMKLNIVDFFKELPQFLVKSGPILSN 137
++D+ E +LC IL V +L DF+K + F +K+ P L +
Sbjct: 500 ASDSVESDLCFPWILSVFQLPAFDFYKVIESF-IKAEPTLKH 540
Score = 67 (28.6 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 24/120 (20%), Positives = 49/120 (40%)
Query: 297 CEASECKSENLENI-DTDGLIYFENL-MXXXXXXXXXNILEKDYDNATRNKGELDERVFI 354
C+ +C + ++N+ + + +++ + L K Y+ + D R+F+
Sbjct: 264 CKEGDCSVDEVKNVYQSTFCAFLDSVGLLGLQGLPPMEALSKQYEELYHKSKDFDARLFL 323
Query: 355 NEDDXXXXXXXXXXXAVNITGAKRKF-DSLASPVKTITSPLSPHRSSASHPNGIAGGATS 413
+ DD V +T K F + +A PV P +P R++ + + G TS
Sbjct: 324 S-DDETLSPNKIEVSKVEVTPRKNLFAEDIAIPV-----PQTPIRAAMTSIQQLRGDLTS 377
Score = 41 (19.5 bits), Expect = 6.5e-18, Sum P(3) = 6.5e-18
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 260 VDLIASLCSIYDTSEDDLRKIMEKT 284
+ L+ +LC D S D+++ + + T
Sbjct: 257 MQLLETLCKEGDCSVDEVKNVYQST 281
>UNIPROTKB|I3LUP8 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 Pfam:PF01857 GO:GO:0005737
GO:GO:0005730 GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 GO:GO:0043550
Ensembl:ENSSSCT00000026766 OMA:AENDSPS Uniprot:I3LUP8
Length = 411
Score = 203 (76.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 41/125 (32%), Positives = 77/125 (61%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 105 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 164
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 165 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 224
Query: 859 TFYNK 863
T NK
Sbjct: 225 TELNK 229
Score = 82 (33.9 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 902 SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
+P +S +P + SP+++ S H VY+SP K +A++S K +Y + S
Sbjct: 303 APPLSPYPFIRSGSPRRIQLSQNHPVYISP---HKSEAMLSPREKIFY-------YFSNS 352
Query: 960 PSKDLTDINHRLNSNR---RVRGTL 981
PSK L +IN + + + RG L
Sbjct: 353 PSKRLREINSMIRTGETPTKKRGIL 377
Score = 64 (27.6 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 847 SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 906
S E++ D+I FYN I++ +K A+K ++ + + D P P SP
Sbjct: 266 SDMEEEERGDLIQFYNSIYIKQIKTF---------ALKYSQANVM----DAP-PLSPYPF 311
Query: 907 VFPALPDMSPKKVSATHNVYVSPLRTSKM 935
+ P ++S H VY+SP ++ M
Sbjct: 312 IRSGSPRRI--QLSQNHPVYISPHKSEAM 338
>WB|WBGene00003020 [details] [associations]
symbol:lin-35 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IGI;IMP] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IGI] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IGI] [GO:0071850 "mitotic cell cycle arrest" evidence=IGI]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
GO:GO:0040027 GO:GO:0071850 GO:GO:0048557 EMBL:FO080198
GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 163 (62.4 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF + AA R+ + +R+ + + + + LF +L T +F +RH+DQI+LCC
Sbjct: 745 LRIFLKRTYFTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCC 804
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
+ + KI++ ++ F EI+ YR+Q V+RSV V
Sbjct: 805 VFVIMKINESSMLFTEIMAQYRRQSANSLLVYRSVTV 841
Score = 124 (48.7 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 479 ERCVTGSLQGANLMDNI----WAEQRRLEALKLYYRVLEAMCTAEAQV-LHAKNLTSLLT 533
ER ++ L G + +NI + ++ LE + L + +E + AE + + ++L +++
Sbjct: 550 ERTLSAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIR 606
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
E F + EL+L ++ FP E G+ F KVI+ I HE+ L R++
Sbjct: 607 REEFLDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMV 665
Query: 594 RHLNSLEERLLESMVWEKGSSMY 616
+H + +EE ++E W+ S ++
Sbjct: 666 QHFSRIEETVIEYFSWKSDSPLW 688
Score = 53 (23.7 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 332 NILEKDYDNATRNKGELDERVFI 354
N+ + Y+N +G +DER+FI
Sbjct: 390 NVPKTAYENYLLQRGSIDERIFI 412
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 814 LTFREI-IYNYRKQPQCKPQVFRSVFVDWASARQSG-RSEQDHVDIITFYNKIFVPAVKP 871
L +R + ++ + P+ PQ + + R G + E+ VDII +YN F +K
Sbjct: 834 LVYRSVTVFQEQLNPE-NPQAVNTK--ETILERLEGPQKEKTTVDIIKYYNIEFRDRIKY 890
Query: 872 LLVELGPA 879
++ ++ A
Sbjct: 891 IIGQIDSA 898
Score = 42 (19.8 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 271 DTSEDDLRKIMEKTNT 286
D EDD ++KTNT
Sbjct: 111 DYEEDDADSFIDKTNT 126
>UNIPROTKB|G5EDT1 [details] [associations]
symbol:lin-35 "Synthetic multivulva protein LIN-35 Rb"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GO:GO:0040027 GO:GO:0071850 GO:GO:0048557
EMBL:FO080198 GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 163 (62.4 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF + AA R+ + +R+ + + + + LF +L T +F +RH+DQI+LCC
Sbjct: 745 LRIFLKRTYFTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCC 804
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
+ + KI++ ++ F EI+ YR+Q V+RSV V
Sbjct: 805 VFVIMKINESSMLFTEIMAQYRRQSANSLLVYRSVTV 841
Score = 124 (48.7 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 479 ERCVTGSLQGANLMDNI----WAEQRRLEALKLYYRVLEAMCTAEAQV-LHAKNLTSLLT 533
ER ++ L G + +NI + ++ LE + L + +E + AE + + ++L +++
Sbjct: 550 ERTLSAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIR 606
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
E F + EL+L ++ FP E G+ F KVI+ I HE+ L R++
Sbjct: 607 REEFLDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMV 665
Query: 594 RHLNSLEERLLESMVWEKGSSMY 616
+H + +EE ++E W+ S ++
Sbjct: 666 QHFSRIEETVIEYFSWKSDSPLW 688
Score = 53 (23.7 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 332 NILEKDYDNATRNKGELDERVFI 354
N+ + Y+N +G +DER+FI
Sbjct: 390 NVPKTAYENYLLQRGSIDERIFI 412
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 814 LTFREI-IYNYRKQPQCKPQVFRSVFVDWASARQSG-RSEQDHVDIITFYNKIFVPAVKP 871
L +R + ++ + P+ PQ + + R G + E+ VDII +YN F +K
Sbjct: 834 LVYRSVTVFQEQLNPE-NPQAVNTK--ETILERLEGPQKEKTTVDIIKYYNIEFRDRIKY 890
Query: 872 LLVELGPA 879
++ ++ A
Sbjct: 891 IIGQIDSA 898
Score = 42 (19.8 bits), Expect = 8.4e-16, Sum P(4) = 8.4e-16
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 271 DTSEDDLRKIMEKTNT 286
D EDD ++KTNT
Sbjct: 111 DYEEDDADSFIDKTNT 126
>UNIPROTKB|H9KZ60 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005059
Uniprot:H9KZ60
Length = 425
Score = 186 (70.5 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 68/251 (27%), Positives = 112/251 (44%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDXXXXXXXXXXXAVNITGAKRKFDSLASPVKTITSP 393
+ K Y+ + G LDER+F+ ED +N A V+ +
Sbjct: 189 INKAYEEYVLSVGNLDERIFLGED--ADEEIGTLTRCLNTPSGMET----AERVQ-VKHN 241
Query: 394 LSPHRSSASHPN---GIAGGA---TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 447
L H + P + G S VTPVS A + L T++ L + PS LE+
Sbjct: 242 LQQHFDRSKSPRVTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQ 301
Query: 448 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALK 506
++C +D + + R + E ++ S E + +NL ++ ++ RR E L
Sbjct: 302 IFRACSRDPSQSIASRVKEMYE-VYCQSMQAEE------EFSNLSKDVASKHFRRAEVL- 353
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 566
YY+VLE++ E + L +L+++L + FHR +LAC E+V T+K + FP + E
Sbjct: 354 -YYKVLESVIEQERRRLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEI 411
Query: 567 TGITAFDLSKV 577
I + KV
Sbjct: 412 FDIPVYHFYKV 422
Score = 75 (31.5 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L LR + ++++FF ++ K ++N+ + + R E L+ NF ++
Sbjct: 8 NYVSLTPFLRCSEQSLIEFFNKM-----KKWEDMANL-PSQFRERTE--RLERNFTVSAV 59
Query: 162 LSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHRFGWLLFL 206
+ K Y+ I+++ F P G KQ T +++ +F W+LF+
Sbjct: 60 IFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRQPCT---VTEVFQFCWVLFV 107
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1024 973 0.00097 122 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 624 (66 KB)
Total size of DFA: 448 KB (2213 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 84.08u 0.15s 84.23t Elapsed: 00:00:04
Total cpu time: 84.10u 0.15s 84.25t Elapsed: 00:00:04
Start: Tue May 21 19:33:00 2013 End: Tue May 21 19:33:04 2013