BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001701
(1024 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578241|ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName: Full=Retinoblastoma-related protein
gi|223530511|gb|EEF32393.1| conserved hypothetical protein [Ricinus communis]
Length = 1020
Score = 1708 bits (4424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1026 (81%), Positives = 913/1026 (88%), Gaps = 8/1026 (0%)
Query: 1 MDDTKPSVTASNN-SESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLA 59
M+D KPS ++ N G+ND E R TD CK GLSV E+ Y+E IKLF+ TKHLLLA
Sbjct: 1 MEDMKPSTASTKNLHHDGVGENDTIEVRFTDFCKIGLSVSEDAYEEAIKLFKGTKHLLLA 60
Query: 60 NISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVD 119
NISAIGNGMPEEAERFWFAFV Y V+RLSEK +N+QQ +DN LC ILR KLNIVD
Sbjct: 61 NISAIGNGMPEEAERFWFAFVSYSVKRLSEKIRDNMQQRPDDNGLTLCQILRRAKLNIVD 120
Query: 120 FFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDA 179
FFKELPQ++VK+GPILS +YG DWENRLEAKELQANFVHLSILS+ YKR YRE FL SDA
Sbjct: 121 FFKELPQYVVKAGPILSTMYGVDWENRLEAKELQANFVHLSILSRHYKRAYRELFLTSDA 180
Query: 180 NGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV 239
N DKQSA A Y+SDYHRFGWLLFLALR+HAFSRFKDLVTCTNGLVS+LAILIIHVPV
Sbjct: 181 NVDKQSATA----YMSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLAILIIHVPV 236
Query: 240 RFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA 299
RFRNFN++DS RFVKK +KGVDL+ASLC+ YDTSED+LRK MEKTN LIADILKKKP A
Sbjct: 237 RFRNFNLNDSQRFVKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIADILKKKPHMA 296
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
SE K+ENL+NI+TDGLIY+E+LM++SSL SSL+ILEKDY++A R KGELDERVFINE+DS
Sbjct: 297 SEYKNENLDNINTDGLIYYEDLMEESSLRSSLDILEKDYEDAIRCKGELDERVFINEEDS 356
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LLGSGSLSGGA+++TG KRKFD ++SP KTITSPLSPHRS ASH NGI G S+M TP
Sbjct: 357 LLGSGSLSGGAISVTGTKRKFDQISSPTKTITSPLSPHRSPASHTNGILGSTNSRMAATP 416
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVI PLPSKPS +LERFL SCD+DVT DV+RRAHIILEAIFPS+ LGE
Sbjct: 417 VSTAMTTAKWLRTVISPLPSKPSPQLERFLASCDRDVTNDVIRRAHIILEAIFPSNALGE 476
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
RCVTGSLQ NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ+LHA NLTSLLTNERFHR
Sbjct: 477 RCVTGSLQSTNLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQILHATNLTSLLTNERFHR 536
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL
Sbjct: 537 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 596
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSSMYNSLTVARP LSAEINRLGLLA+PMPSLDAIA HINFSSGGL P
Sbjct: 597 EERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIAVHINFSSGGLPP 656
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+ S+ KHE SPGQNGDIRSPKRPCTDYRSVLVERN+FTSPVKDRLL NLKSK PPPL
Sbjct: 657 LSSVSKHEISPGQNGDIRSPKRPCTDYRSVLVERNSFTSPVKDRLLAFTNLKSKLPPPPL 716
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQ-IRESVYCL 778
QSAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQ SQQ IRE+VY L
Sbjct: 717 QSAFASPTRPNPGGGGETCAETGINIFFSKINKLAAVRINGMVERLQQSQQHIRENVYRL 776
Query: 779 FQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF 838
FQQ+L+Q+TSLFFNRHIDQIILCCFYGVAKIS++NLTFREIIYNYRKQPQCKPQVFRSVF
Sbjct: 777 FQQVLSQQTSLFFNRHIDQIILCCFYGVAKISKVNLTFREIIYNYRKQPQCKPQVFRSVF 836
Query: 839 VDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
VDW+SAR +GR+ QDHVDIITFYN+IF+PA KPLLVE+G AG +K ++V EVN+N DG
Sbjct: 837 VDWSSARHNGRTGQDHVDIITFYNEIFIPAAKPLLVEVGSAGITVKGSQVPEVNNNKDGQ 896
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
CP SPKVS FP+LPDMSPKKVSA HNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 897 CPASPKVSPFPSLPDMSPKKVSAAHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 956
Query: 959 SPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLK 1018
SPSKDLT IN+RLN NR +RG+LNFD DVDVGLVSDSMVA SLYLQNGS A+++ A LK
Sbjct: 957 SPSKDLTAINNRLNGNRNIRGSLNFD--DVDVGLVSDSMVAKSLYLQNGSCASTSGAPLK 1014
Query: 1019 PEQPDP 1024
EQPDP
Sbjct: 1015 TEQPDP 1020
>gi|449449453|ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
Length = 1024
Score = 1652 bits (4278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 788/1024 (76%), Positives = 899/1024 (87%), Gaps = 5/1024 (0%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
+ +TKP A+N+ ++ G + A + + + LC++GL +DEN + KLFRETKHLL AN
Sbjct: 4 VGETKP--LATNSCHTDGGTDTAADLQFSVLCQHGLHLDENCCNQAFKLFRETKHLLGAN 61
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
ISAIG+G+PEEAERFW AFVLY V+RL +KN E QGS +N F LCHILRV KLNIV+F
Sbjct: 62 ISAIGSGIPEEAERFWSAFVLYSVKRLRDKNSETSHQGSENNSFTLCHILRVCKLNIVEF 121
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP+LSN+YGADWENRLEAKELQANFVHLS+LSK YKR+YREFF +DAN
Sbjct: 122 FKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHLSLLSKYYKRVYREFFSTNDAN 181
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+KQSA + +GY+SDYHRFGWLLFLALR+HAFSRFKDLVTCTNGLVSILAILI+HVPV
Sbjct: 182 VEKQSAISCPTGYLSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHVPVH 241
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DS R VKK KGVDL+ SLC +YDTSE++LR++MEK N LI DILKKKP AS
Sbjct: 242 FRNFNILDSERLVKKGGKGVDLLGSLCDVYDTSEEELREVMEKANGLIEDILKKKPRLAS 301
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGE-LDERVFINEDDS 359
EC S++LENIDT+GLIYFE LM++ SLS+SL ILEKDY++A NKGE LDERVF+N++DS
Sbjct: 302 ECNSKSLENIDTEGLIYFEGLMEEPSLSASLEILEKDYEDAIHNKGEQLDERVFVNDEDS 361
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LLGSGSLS GAV + G KRK DS+ SP +TITSP+SP RS ASH NG +K+ TP
Sbjct: 362 LLGSGSLSAGAVTMGGIKRKLDSMCSPARTITSPMSPLRSPASHANGTLNSGNTKIAATP 421
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVI PLP+KPS E+ERFL SCD+DVT DV+RRAHIILEAIFP++ LGE
Sbjct: 422 VSTAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDVVRRAHIILEAIFPNTALGE 481
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
RC+ GSLQ A+LMDNIWAEQRRLEALKLYYRVLEAMC AE+Q+LH NLTSLLTNERFHR
Sbjct: 482 RCIAGSLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAESQMLHVTNLTSLLTNERFHR 541
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL
Sbjct: 542 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 601
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSS+YNSL VA+P L AEINRLGLLA+PMPSLDAIA INFS G+S
Sbjct: 602 EERLLESMVWEKGSSIYNSLIVAKPGLGAEINRLGLLAEPMPSLDAIAVQINFSGIGVSA 661
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+L +HE+ PGQNGDIRSPKR CTD RSVLVERN+FTSPVKDRL+ +++KSK LPPPL
Sbjct: 662 TPNLQRHESLPGQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPL 721
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNPGGGGETCAETGINIFF KI KLAAVR+N MVERLQLS QIRE+VYCLF
Sbjct: 722 QSAFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLF 781
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQIL+Q+TS+ FNRHIDQIILCCFYGVAKISQL+LTFREIIYNYRKQPQCKPQVFR+VFV
Sbjct: 782 QQILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFV 841
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
DW+SAR++GRS QDHVDIITFYN+IF+P+VKPLLVE+GPAG+ MKT+RV +VN+++D PC
Sbjct: 842 DWSSARRNGRSGQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPC 901
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
PGSPK+S FP+LPDMSPKKVS+ HNVYVSPLR+SKMDALISHSSKSYYACVGESTHA+QS
Sbjct: 902 PGSPKLSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQS 961
Query: 960 PSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
PSKDLT IN+RLN R++RGTLNFD D DVGLVSDS+VANSLYLQNGS +S+ A +K
Sbjct: 962 PSKDLTAINNRLNGTRKLRGTLNFD--DADVGLVSDSLVANSLYLQNGSCGSSSGAPIKS 1019
Query: 1020 EQPD 1023
EQP+
Sbjct: 1020 EQPE 1023
>gi|449487265|ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
Length = 1125
Score = 1648 bits (4267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/1024 (76%), Positives = 900/1024 (87%), Gaps = 5/1024 (0%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
+ +TKP A+N+ ++ G + A + + + LC++GL +DEN + KLFRETKHLL AN
Sbjct: 105 VGETKP--LATNSCHTDGGTDTAADLQFSVLCQHGLHLDENCCNQAFKLFRETKHLLGAN 162
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
ISAIG+G+PEEAERFW AFVLY V+RL +KN E+ QGS +N F LCHILRV KLNIV+F
Sbjct: 163 ISAIGSGIPEEAERFWSAFVLYSVKRLRDKNSESSHQGSENNSFTLCHILRVCKLNIVEF 222
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP+LSN+YGADWENRLEAKELQANFVHLS+LSK YKR+YREFF +DAN
Sbjct: 223 FKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHLSLLSKYYKRVYREFFSTNDAN 282
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+KQSA + +GY+SDYHRFGWLLFLALR+HAFSRFKDLVTCTNGLVSILAILI+HVPV
Sbjct: 283 VEKQSAISCPTGYLSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHVPVH 342
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DS R VKK KGVDL+ SLC +YDTSE++LR++MEK N LI DILKKKP AS
Sbjct: 343 FRNFNILDSERLVKKGGKGVDLLGSLCDVYDTSEEELREVMEKANGLIEDILKKKPRLAS 402
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGE-LDERVFINEDDS 359
EC S++LENIDT+GLIYFE LM++ SLS++L ILEKDY++A NKGE LDERVF+N++DS
Sbjct: 403 ECNSKSLENIDTEGLIYFEGLMEEPSLSANLEILEKDYEDAIHNKGEQLDERVFVNDEDS 462
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LLGSGSLS GAV + G KRK DS+ SP +TITSP+SP RS ASH NG +K+ TP
Sbjct: 463 LLGSGSLSAGAVTMGGIKRKLDSMCSPARTITSPMSPLRSPASHANGTLNSGNTKIAATP 522
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVI PLP+KPS E+ERFL SCD+DVT DV+RRAHIILEAIFP++ LGE
Sbjct: 523 VSTAMTTAKWLRTVISPLPAKPSVEMERFLASCDRDVTNDVVRRAHIILEAIFPNTALGE 582
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
RC+ G+LQ A+LMDNIWAEQRRLEALKLYYRVLEAMC AE+Q+LH NLTSLLTNERFHR
Sbjct: 583 RCIAGNLQSASLMDNIWAEQRRLEALKLYYRVLEAMCRAESQMLHVTNLTSLLTNERFHR 642
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL
Sbjct: 643 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 702
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSS+YNSL VA+P L AEINRLGLLA+PMPSLDAIA INFS G+S
Sbjct: 703 EERLLESMVWEKGSSIYNSLIVAKPGLGAEINRLGLLAEPMPSLDAIAVQINFSGIGVSA 762
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+L KHE+ PGQNGDIRSPKR CTD RSVLVERN+FTSPVKDRL+ +++KSK LPPPL
Sbjct: 763 TPNLQKHESLPGQNGDIRSPKRLCTDLRSVLVERNSFTSPVKDRLMAFSSIKSKLLPPPL 822
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNPGGGGETCAETGINIFF KI KLAAVR+N MVERLQLS QIRE+VYCLF
Sbjct: 823 QSAFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQLSHQIRENVYCLF 882
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQIL+Q+TS+ FNRHIDQIILCCFYGVAKISQL+LTFREIIYNYRKQPQCKPQVFR+VFV
Sbjct: 883 QQILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQPQCKPQVFRNVFV 942
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
DW+SAR++GRS QDHVDIITFYN+IF+P+VKPLLVE+GPAG+ MKT+RV +VN+++D PC
Sbjct: 943 DWSSARRNGRSGQDHVDIITFYNEIFIPSVKPLLVEIGPAGSTMKTDRVPQVNNDSDAPC 1002
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
PGSPK+S FP+LPDMSPKKVS+ HNVYVSPLR+SKMDALISHSSKSYYACVGESTHA+QS
Sbjct: 1003 PGSPKLSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAFQS 1062
Query: 960 PSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
PSKDLT IN+RLN R++RGTLNFD D DVGLVSDS+VANSLYLQNGS +S+ A +K
Sbjct: 1063 PSKDLTAINNRLNGTRKLRGTLNFD--DADVGLVSDSLVANSLYLQNGSCGSSSGAPIKS 1120
Query: 1020 EQPD 1023
EQP+
Sbjct: 1121 EQPE 1124
>gi|224053236|ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName: Full=Retinoblastoma-related protein
gi|222844988|gb|EEE82535.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
Length = 1035
Score = 1647 bits (4266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 801/1031 (77%), Positives = 902/1031 (87%), Gaps = 13/1031 (1%)
Query: 1 MDDTKPSVTASNNSESNAGD-----NDATEARLTDLCKNGLSVDENTYKEIIKLFRETKH 55
M++ K +V +++S ++ G+ +DA E R +D CK+GL++DENT + IKLF++TKH
Sbjct: 9 MEENKTTVMTTSHSSNDGGETVKGYSDAVEVRFSDFCKSGLALDENTCTQAIKLFKDTKH 68
Query: 56 LLLANISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKL 115
LL+ N+S+IGNG EEAERFWFAFV Y V+RLSEKN ++ QQ S+D LC ILR+ KL
Sbjct: 69 LLMTNVSSIGNGTSEEAERFWFAFVSYSVKRLSEKNRDDAQQKSDDPGLTLCQILRLAKL 128
Query: 116 NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL 175
NIVDFFKELP F+VK+GPILSNIYGADWENRLEAKELQANFVHLSILS+ YKR RE FL
Sbjct: 129 NIVDFFKELPHFIVKAGPILSNIYGADWENRLEAKELQANFVHLSILSRHYKRACRELFL 188
Query: 176 PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILII 235
SDA+ DKQ A ++ + ++SD+HRFGWLLFLALR+HAFSRFKDLVTCTNGLVS+LA+LII
Sbjct: 189 TSDASSDKQPAISNEATHVSDHHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLAVLII 248
Query: 236 HVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK 295
HVPVRFRNF+ +DS FV+K +KGVDL+ASLC+ YDTSE+ LRK ME TN LIA+ILKKK
Sbjct: 249 HVPVRFRNFSFNDSQWFVRKGDKGVDLLASLCNKYDTSEEVLRKSMETTNNLIANILKKK 308
Query: 296 PCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN 355
P ASE K+ENL NI+ DGLIY+E+LM++SSL SSLNILEKDYD+A RNK ELDERVFIN
Sbjct: 309 PHSASEYKNENLVNINPDGLIYYEDLMEESSLQSSLNILEKDYDDAIRNKAELDERVFIN 368
Query: 356 EDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKM 415
E+DSLLGSGS+S G++NITGAKRKFD ++SP KTITSPLSPHRS ASH NGI G A SKM
Sbjct: 369 EEDSLLGSGSVSAGSLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKM 428
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
TPVSTAMTTAKWLRT+I PLPSKPSA+LERFL SCDKDVT DV+RRA IILEAIFPSS
Sbjct: 429 AATPVSTAMTTAKWLRTIISPLPSKPSAQLERFLVSCDKDVTNDVIRRAQIILEAIFPSS 488
Query: 476 GLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
LGERCV GSLQ NLMDNIWAEQRRLEALKLYYRVLE+MCTAEAQ+LHA NLTSLLTNE
Sbjct: 489 SLGERCVNGSLQSTNLMDNIWAEQRRLEALKLYYRVLESMCTAEAQILHATNLTSLLTNE 548
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
RFHRCMLACSAELV+AT+KTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH
Sbjct: 549 RFHRCMLACSAELVVATYKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 608
Query: 596 LNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
LNSLEERLL+SMVWEKGSS+YNSLTVARP LSAEINRLGLLA+PMPSLDAIA HINFSSG
Sbjct: 609 LNSLEERLLDSMVWEKGSSLYNSLTVARPALSAEINRLGLLAEPMPSLDAIAMHINFSSG 668
Query: 656 GLSPVHSLHKHETSP--GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK 713
L PV SL KHETSP GQNGD+RSPKRPCTD+RSVLVERN+FTSPVKDRLLG NLKSK
Sbjct: 669 CLPPVPSLQKHETSPGSGQNGDLRSPKRPCTDFRSVLVERNSFTSPVKDRLLG--NLKSK 726
Query: 714 PLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQ-IR 772
PPPLQSAFASPTRPNPGGGGETCAETGIN+FF KINKLAAVRIN M+E+LQ SQQ IR
Sbjct: 727 LPPPPLQSAFASPTRPNPGGGGETCAETGINVFFTKINKLAAVRINGMIEKLQPSQQHIR 786
Query: 773 ESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQ 832
E+VY LFQ IL+ +TSLFFNRHIDQIILCCFYGVAKIS+LNLTFREIIYNYR+QP CK
Sbjct: 787 ENVYRLFQLILSHQTSLFFNRHIDQIILCCFYGVAKISKLNLTFREIIYNYRRQPHCKTL 846
Query: 833 VFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN 892
VFRSVFVDW+SAR +GR+ QDHVDIITFYN+IF+PA KPLLV++G AGT +K + V EV
Sbjct: 847 VFRSVFVDWSSARHNGRTGQDHVDIITFYNEIFIPAAKPLLVDVGSAGTTVKASNVPEVG 906
Query: 893 HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
+N DG CP SPKVS FP+LPDMSPKKVS+ HNVYVSPLR+SKMDALIS+SSKSYYACVGE
Sbjct: 907 NNKDGQCPASPKVSPFPSLPDMSPKKVSSAHNVYVSPLRSSKMDALISNSSKSYYACVGE 966
Query: 953 STHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
STHAYQSPSKDL IN+RLN NR+ RGTLN D+ DVGLVSDSMVANSL LQNG+ A++
Sbjct: 967 STHAYQSPSKDLNAINNRLNGNRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCAST 1023
Query: 1013 TCAVLKPEQPD 1023
+ A LK EQ D
Sbjct: 1024 SGAALKSEQSD 1034
>gi|7381060|gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
tremuloides]
Length = 1035
Score = 1642 bits (4253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 800/1031 (77%), Positives = 901/1031 (87%), Gaps = 13/1031 (1%)
Query: 1 MDDTKPSVTASNNSESNAGD-----NDATEARLTDLCKNGLSVDENTYKEIIKLFRETKH 55
M++ K +V +++S ++ G+ +DA E R +D CK+GL++DENT + IKLF++TKH
Sbjct: 9 MEENKTTVMTTSHSSNDGGETVKGYSDAVEVRFSDFCKSGLALDENTCTQAIKLFKDTKH 68
Query: 56 LLLANISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKL 115
LL+ N+S+IGNG EEAERFWFAFV Y V+RLSEKN ++ QQ S+D LC ILR+ KL
Sbjct: 69 LLMTNVSSIGNGTSEEAERFWFAFVSYSVKRLSEKNRDDAQQKSDDPGLTLCQILRLAKL 128
Query: 116 NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL 175
NIVDFFKELP F+VK+GPILSNIYGADWENRLEAKELQANFVHLSILS+ YKR RE FL
Sbjct: 129 NIVDFFKELPHFIVKAGPILSNIYGADWENRLEAKELQANFVHLSILSRHYKRACRELFL 188
Query: 176 PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILII 235
SDA+ DKQ A ++ + ++SD+HRFGWLLFLALR+HAFSRFKDLVTCTNGLVS+LA+LII
Sbjct: 189 TSDASSDKQPAISNEATHVSDHHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSVLAVLII 248
Query: 236 HVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK 295
HVPV FRNF+ +DS FV+K +KGVDL+ASLC+ YDTSE+ LRK ME TN LIA+ILKKK
Sbjct: 249 HVPVCFRNFSFNDSQWFVRKGDKGVDLLASLCNKYDTSEEVLRKSMETTNNLIANILKKK 308
Query: 296 PCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN 355
P ASE K+ENL NI+ DGLIY+E+LM++SSL SSLNILEKDYD+A RNK ELDERVFIN
Sbjct: 309 PHSASEYKNENLVNINPDGLIYYEDLMEESSLQSSLNILEKDYDDAIRNKAELDERVFIN 368
Query: 356 EDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKM 415
E+DSLLGSGS+S G++NITGAKRKFD ++SP KTITSPLSPHRS ASH NGI G A SKM
Sbjct: 369 EEDSLLGSGSVSAGSLNITGAKRKFDLISSPTKTITSPLSPHRSPASHANGIPGSANSKM 428
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
TPVSTAMTTAKWLRT+I PLPSKPSA+LERFL SCDKDVT DV+RRA IILEAIFPSS
Sbjct: 429 AATPVSTAMTTAKWLRTIISPLPSKPSAQLERFLVSCDKDVTNDVIRRAQIILEAIFPSS 488
Query: 476 GLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
LGERCVTGSLQ NLMDNIWAEQRRLEALKLYYRVLE+MCTAEAQ+LHA NLTSLLTNE
Sbjct: 489 SLGERCVTGSLQSTNLMDNIWAEQRRLEALKLYYRVLESMCTAEAQILHATNLTSLLTNE 548
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
RFHRCMLACSAELV+AT+KTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH
Sbjct: 549 RFHRCMLACSAELVVATYKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 608
Query: 596 LNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
LNSLEERLL+SMVWEKGSS+YNSLTVAR LSAEINRLGLLA+PMPSLDAIA HINFSSG
Sbjct: 609 LNSLEERLLDSMVWEKGSSLYNSLTVARTALSAEINRLGLLAEPMPSLDAIAMHINFSSG 668
Query: 656 GLSPVHSLHKHETSP--GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK 713
L PV SL KHETSP GQNGD+RSPKRPCTD+RSVLVERN+FTSPVKDRLLG NLKSK
Sbjct: 669 CLPPVPSLQKHETSPGSGQNGDLRSPKRPCTDFRSVLVERNSFTSPVKDRLLG--NLKSK 726
Query: 714 PLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQ-IR 772
PPPLQSAFASPTRPNPGGGGETCAETGIN+FF KINKLAAVRIN M+E+LQ SQQ IR
Sbjct: 727 LPPPPLQSAFASPTRPNPGGGGETCAETGINVFFTKINKLAAVRINGMIEKLQPSQQHIR 786
Query: 773 ESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQ 832
E+VY LFQ IL+ +TSLFFNRHIDQIILCCFYGVAKIS+LNLTFREIIYNYR+QP CK
Sbjct: 787 ENVYRLFQLILSHQTSLFFNRHIDQIILCCFYGVAKISKLNLTFREIIYNYRRQPHCKTL 846
Query: 833 VFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN 892
VFRSVFVDW+SAR +GR+ QDHVDIITFYN+IF+PA KPLLV++G AGT +K + V EV
Sbjct: 847 VFRSVFVDWSSARHNGRTGQDHVDIITFYNEIFIPAAKPLLVDVGSAGTTVKASNVPEVG 906
Query: 893 HNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
+N DG CP SPKVS FP+LPDMSPKKVS+ HNVYVSPLR+SKMDALIS+SSKSYYACVGE
Sbjct: 907 NNKDGQCPASPKVSPFPSLPDMSPKKVSSVHNVYVSPLRSSKMDALISNSSKSYYACVGE 966
Query: 953 STHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
STHAYQSPSKDL IN+RLN NR+ RGTLN D+ DVGLVSDSMVANSL LQNG+ A++
Sbjct: 967 STHAYQSPSKDLNAINNRLNGNRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCAST 1023
Query: 1013 TCAVLKPEQPD 1023
+ A LK EQ D
Sbjct: 1024 SGAALKSEQSD 1034
>gi|359476005|ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
gi|254789791|sp|A7P514.1|RBR_VITVI RecName: Full=Retinoblastoma-related protein
gi|359392418|gb|AEV45768.1| RBR protein [Vitis pseudoreticulata]
Length = 1007
Score = 1609 bits (4167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 804/1025 (78%), Positives = 896/1025 (87%), Gaps = 21/1025 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLL-LA 59
MD KP +A A EAR T+ CKNGL +DE+T+ + +KLF E+ HLL
Sbjct: 1 MDGVKPVASAEQGG--------AVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTT 52
Query: 60 NISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVD 119
++SAIGNG+PE++ER+WFAF+LY V+RLSE EN+QQG+++N FNLC ILRV KLNIVD
Sbjct: 53 SLSAIGNGVPEDSERYWFAFILYSVKRLSEGTAENVQQGNDENGFNLCQILRVSKLNIVD 112
Query: 120 FFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDA 179
FFKELPQF+VK GPIL N+YG DWE RLEAKELQANFVHLSILSK YKR Y EFF S +
Sbjct: 113 FFKELPQFIVKVGPILGNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTSGS 172
Query: 180 NGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV 239
N DKQS+ S SGY+SDYHRFGWLLFLALR+HAFSRFKDLVTCTNGLVSILAILI+HVP+
Sbjct: 173 NLDKQSSVISASGYVSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHVPI 232
Query: 240 RFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA 299
FR+F I++ RFVKK NKG+DL+ASLC IY+TSED++RK ME+TN +I DILKKKPC A
Sbjct: 233 SFRSFTINNYPRFVKKGNKGMDLLASLCDIYETSEDEVRKTMEQTNKVIVDILKKKPCLA 292
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
SECKSENL +ID DGL+YFE+LMD+SSLSSS+NILEKDYD A RNKGELDERVFIN +DS
Sbjct: 293 SECKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIRNKGELDERVFINGEDS 352
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LLGSGSLSGGA++I+GAKRK DSLASP KTITSPLSP+RS GI GGA SKM TP
Sbjct: 353 LLGSGSLSGGAMSISGAKRKIDSLASPAKTITSPLSPNRSP-----GILGGANSKMAPTP 407
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
V+TAMTTAKWLRTVI PLPSKPSAELERFL SCDKDVT+DV+RRA++ILEAIFPS GE
Sbjct: 408 VTTAMTTAKWLRTVISPLPSKPSAELERFLTSCDKDVTSDVIRRANVILEAIFPSIAFGE 467
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
RCVTGS A+LMD+IWA+QRR+EA+KLYYRVLEAMCTAEAQVLHA NLTSLLTNERFHR
Sbjct: 468 RCVTGS---ASLMDSIWAQQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHR 524
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL
Sbjct: 525 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 584
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSSMYNSL VAR LSAE+NRLGLLA+PMPSLDAI+ HIN S GGL P
Sbjct: 585 EERLLESMVWEKGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPP 644
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
V SL K E+SPGQNGDIRSPKR C DYRSVLVERN+FTSPVKDR L LNNLKSK PPPL
Sbjct: 645 VPSLQKRESSPGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPL 704
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNPG GETCAETGINIFF KI KLAAVRIN MVERLQLSQQ+RE+VYCLF
Sbjct: 705 QSAFASPTRPNPGREGETCAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLF 764
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQILN+RTSLFFNRHIDQIILCCFYG+AKISQ+NLTFREII+NYRKQPQCKPQ+FRSVFV
Sbjct: 765 QQILNRRTSLFFNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFV 824
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVEL-GPAGTAMKTNRVSEVNHNNDGP 898
DW+SAR++G++ ++HVDIITFYN+IF+PAVKPLL+E+ GT KTNRV EVN+NND
Sbjct: 825 DWSSARRNGKTGKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQ 884
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
CP SPK+S FP+LPDMSPKKVSA HNVYVSPLR+SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 885 CPESPKISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQ 944
Query: 959 SPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLK 1018
SPSKDLT IN+RLNS R++RG LNFDDV+ GLVSDS+VA SLYLQNGS A+S+ A LK
Sbjct: 945 SPSKDLTAINNRLNSTRKLRGALNFDDVE---GLVSDSLVAKSLYLQNGSCASSSGAPLK 1001
Query: 1019 PEQPD 1023
EQPD
Sbjct: 1002 LEQPD 1006
>gi|296081790|emb|CBI20795.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 1604 bits (4154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 804/1025 (78%), Positives = 895/1025 (87%), Gaps = 22/1025 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLL-LA 59
MD KP +A A EAR T+ CKNGL +DE+T+ + +KLF E+ HLL
Sbjct: 1 MDGVKPVASAEQGG--------AVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTT 52
Query: 60 NISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVD 119
++SAIGNG PE++ER+WFAF+LY V+RLSE EN+QQG+++N FNLC ILRV KLNIVD
Sbjct: 53 SLSAIGNG-PEDSERYWFAFILYSVKRLSEGTAENVQQGNDENGFNLCQILRVSKLNIVD 111
Query: 120 FFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDA 179
FFKELPQF+VK GPIL N+YG DWE RLEAKELQANFVHLSILSK YKR Y EFF S +
Sbjct: 112 FFKELPQFIVKVGPILGNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTSGS 171
Query: 180 NGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV 239
N DKQS+ S SGY+SDYHRFGWLLFLALR+HAFSRFKDLVTCTNGLVSILAILI+HVP+
Sbjct: 172 NLDKQSSVISASGYVSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHVPI 231
Query: 240 RFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA 299
FR+F I++ RFVKK NKG+DL+ASLC IY+TSED++RK ME+TN +I DILKKKPC A
Sbjct: 232 SFRSFTINNYPRFVKKGNKGMDLLASLCDIYETSEDEVRKTMEQTNKVIVDILKKKPCLA 291
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
SECKSENL +ID DGL+YFE+LMD+SSLSSS+NILEKDYD A RNKGELDERVFIN +DS
Sbjct: 292 SECKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIRNKGELDERVFINGEDS 351
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LLGSGSLSGGA++I+GAKRK DSLASP KTITSPLSP+RS GI GGA SKM TP
Sbjct: 352 LLGSGSLSGGAMSISGAKRKIDSLASPAKTITSPLSPNRSP-----GILGGANSKMAPTP 406
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
V+TAMTTAKWLRTVI PLPSKPSAELERFL SCDKDVT+DV+RRA++ILEAIFPS GE
Sbjct: 407 VTTAMTTAKWLRTVISPLPSKPSAELERFLTSCDKDVTSDVIRRANVILEAIFPSIAFGE 466
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
RCVTGS A+LMD+IWA+QRR+EA+KLYYRVLEAMCTAEAQVLHA NLTSLLTNERFHR
Sbjct: 467 RCVTGS---ASLMDSIWAQQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHR 523
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL
Sbjct: 524 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 583
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSSMYNSL VAR LSAE+NRLGLLA+PMPSLDAI+ HIN S GGL P
Sbjct: 584 EERLLESMVWEKGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPP 643
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
V SL K E+SPGQNGDIRSPKR C DYRSVLVERN+FTSPVKDR L LNNLKSK PPPL
Sbjct: 644 VPSLQKRESSPGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPL 703
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNPG GETCAETGINIFF KI KLAAVRIN MVERLQLSQQ+RE+VYCLF
Sbjct: 704 QSAFASPTRPNPGREGETCAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLF 763
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQILN+RTSLFFNRHIDQIILCCFYG+AKISQ+NLTFREII+NYRKQPQCKPQ+FRSVFV
Sbjct: 764 QQILNRRTSLFFNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFV 823
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVEL-GPAGTAMKTNRVSEVNHNNDGP 898
DW+SAR++G++ ++HVDIITFYN+IF+PAVKPLL+E+ GT KTNRV EVN+NND
Sbjct: 824 DWSSARRNGKTGKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQ 883
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
CP SPK+S FP+LPDMSPKKVSA HNVYVSPLR+SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 884 CPESPKISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQ 943
Query: 959 SPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLK 1018
SPSKDLT IN+RLNS R++RG LNFDDV+ GLVSDS+VA SLYLQNGS A+S+ A LK
Sbjct: 944 SPSKDLTAINNRLNSTRKLRGALNFDDVE---GLVSDSLVAKSLYLQNGSCASSSGAPLK 1000
Query: 1019 PEQPD 1023
EQPD
Sbjct: 1001 LEQPD 1005
>gi|356556778|ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1002
Score = 1585 bits (4104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/1023 (77%), Positives = 882/1023 (86%), Gaps = 22/1023 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+D KP N GD E+R + CKNGL+++E + K+ LF ETKH+LL+N
Sbjct: 1 MEDGKPM---------NGGDQ--VESRFVEFCKNGLALEEKSCKKAKNLFGETKHILLSN 49
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
S++GNG EEAER+WFAF+LY V++L +KN E ++ + + +LC ILR KLNI DF
Sbjct: 50 FSSMGNGTSEEAERYWFAFILYSVKKLIQKNEEGGKEDAENTGLSLCRILRAAKLNIADF 109
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP LSN+YG DWENRLEAKE+ AN +HL ILSK YKR++ EFF+ +D N
Sbjct: 110 FKELPQFVVKAGPTLSNLYGTDWENRLEAKEMHANAIHLKILSKYYKRVFGEFFVSTDTN 169
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K S S + + S+YHRFGWLLFLALR+HAFSRFKDLVTCTNGL+SILAILIIHVP R
Sbjct: 170 AEKNS---SITVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTR 226
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNIHDSSRFVKKSNKGVDL+ASLC+IY+TSED+LRK MEK N +IADILKK+PC AS
Sbjct: 227 FRNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANNVIADILKKQPCLAS 286
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC++ENLENID DGL YF++LM++SSL SSLN+LEKDYD RNK ELDER+FINEDDSL
Sbjct: 287 ECETENLENIDKDGLTYFKDLMEESSLPSSLNMLEKDYDYMIRNKSELDERLFINEDDSL 346
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
L S SLSGG+V++ G KRKFDS+ASP KTITSPLSPHRS SH NGI G A SKM TPV
Sbjct: 347 LASVSLSGGSVSVGGVKRKFDSMASPAKTITSPLSPHRSPTSHTNGIPGSANSKMAATPV 406
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PLPSKPS ELERFL SCD+DVT+DV+RRA IIL+AIFPSS LGER
Sbjct: 407 STAMTTAKWLRTVISPLPSKPSPELERFLTSCDRDVTSDVVRRAQIILQAIFPSSPLGER 466
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
CVTGSLQ ANLMDNIWAEQRRLEALKLYYRVLEAMC AEAQV HA NLTSLLTNERFHRC
Sbjct: 467 CVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTSLLTNERFHRC 526
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE
Sbjct: 527 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 586
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP LSAEINRLGLLA+PMPSLD IA HINFS GGL PV
Sbjct: 587 ERLLESMVWEKGSSMYNSLAVARPSLSAEINRLGLLAEPMPSLDEIAMHINFSCGGLPPV 646
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
+L K E+SP QNGDIRSPK R+VL+ERN+FTSPVKDRLL N+LKSK PPPLQ
Sbjct: 647 PTLPKLESSPTQNGDIRSPK------RNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQ 700
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPT+PNPGGGGETCAETGINIFF KI KL AVRI+ MVERLQLSQQIRE+VYCLFQ
Sbjct: 701 SAFASPTKPNPGGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYCLFQ 760
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+ILNQ TSLFFN HIDQIILCCFYGVAKISQLNLTF+EI+YNYRKQP CK QVFRSVFVD
Sbjct: 761 RILNQWTSLFFNHHIDQIILCCFYGVAKISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVD 820
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
W+ AR++GR+ QDHVDIITFYN+IF+P+VKPLLVELGPAG K++R+ EVN+ N+ CP
Sbjct: 821 WSLARRNGRTGQDHVDIITFYNEIFIPSVKPLLVELGPAGPTPKSDRIPEVNNKNEAQCP 880
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPK+S FP LPDMSPKKVSATHNVYVSPLR+SKM+ALISHSSKSYYACVGESTHAYQSP
Sbjct: 881 GSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSP 940
Query: 961 SKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPE 1020
SKDLT IN+RLN NR+VRG LNFD DVDVGLVSDSMVANSLYLQNGS A+S+ A LK E
Sbjct: 941 SKDLTAINNRLNGNRKVRGPLNFD--DVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSE 998
Query: 1021 QPD 1023
QPD
Sbjct: 999 QPD 1001
>gi|122232354|sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
gi|89111303|dbj|BAE80326.1| retinoblastoma related protein [Camellia sinensis]
Length = 1025
Score = 1555 bits (4027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/1021 (75%), Positives = 867/1021 (84%), Gaps = 5/1021 (0%)
Query: 5 KPSVTASNNSESNAGDNDAT-EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
KPS+ ++ S SN G + +AR CK GLS++ENTY E +KLF E+KHLL ISA
Sbjct: 7 KPSIPTADASLSNHGRGGPSLDARFAYFCKTGLSLNENTYTEAMKLFSESKHLLSTTISA 66
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKE 123
IG G PEEAER+WFAFVLY V+RLSE N ++ QG+ + F LC ILRV KLNIVDFFKE
Sbjct: 67 IGTGTPEEAERYWFAFVLYSVKRLSEANADDSSQGTGGDGFTLCQILRVAKLNIVDFFKE 126
Query: 124 LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDK 183
LPQF+VK+GPILSN YG DWE RLEAKELQANFVHLS+LSK YKR +REFFL SDA +
Sbjct: 127 LPQFIVKAGPILSNQYGTDWEKRLEAKELQANFVHLSLLSKYYKRAFREFFLTSDAKVGE 186
Query: 184 QSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
QS AA SGY+SDYHRFGWLLFLALR HAFSRFKDLVTCTNGLV+ILAILIIH+PVR RN
Sbjct: 187 QSTAAIASGYVSDYHRFGWLLFLALRTHAFSRFKDLVTCTNGLVAILAILIIHIPVRVRN 246
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECK 303
FN+HDS RFV K +KGVDL+ASLC+IY+TSED+LRK MEK N LI DILKK ASEC+
Sbjct: 247 FNLHDSPRFVMKGSKGVDLLASLCNIYETSEDELRKTMEKANDLIEDILKKNRRSASECR 306
Query: 304 SENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGS 363
SENLENI TDGLIYFE+L+DD+SL SSLNIL KDY +ATRNKGELDERVF+NE+DSLLG
Sbjct: 307 SENLENIATDGLIYFEDLLDDTSLPSSLNILGKDYADATRNKGELDERVFVNEEDSLLGP 366
Query: 364 GSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS-SASHPNGIAGGATSKMVVTPVST 422
GSLSGGA+NI+GAKRK DS+ASP +TITSPL+P+ S SASH I G+ SKM TPV+T
Sbjct: 367 GSLSGGAMNISGAKRKIDSIASPARTITSPLAPYCSPSASHAKAIPCGSNSKMAATPVTT 426
Query: 423 AMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCV 482
AMTTAKWLRT+I PLP KPS ELERFL SCD DVTTDV+RRA+IILEAIFPSSGLGE C+
Sbjct: 427 AMTTAKWLRTIISPLPPKPSPELERFLSSCDSDVTTDVIRRANIILEAIFPSSGLGEECI 486
Query: 483 TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCML 542
TG LQ +LMD+IWAEQRRLEALKLYYRVL+AMCTAEAQ+LHA NLTSLLTNERFHRCML
Sbjct: 487 TGGLQCTSLMDSIWAEQRRLEALKLYYRVLQAMCTAEAQILHANNLTSLLTNERFHRCML 546
Query: 543 ACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 602
ACSAELVLATHKT TMLFPAVLERTGITAFDLSK+I R +ESLPREL+RHLNSLEER
Sbjct: 547 ACSAELVLATHKTATMLFPAVLERTGITAFDLSKMIGVSFRLKESLPRELKRHLNSLEER 606
Query: 603 LLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHS 662
LLESMVWEKGSSMYNSLTVARP LSAE NRL LLA+PMPSLDAIA H+N + G L + S
Sbjct: 607 LLESMVWEKGSSMYNSLTVARPALSAETNRLCLLAEPMPSLDAIAMHMNITCGSLPCLPS 666
Query: 663 LHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSA 722
L K+E GQNGDI+SPKR CT+YRSVLVERN+FTSPVKDRLL N KSK PP LQSA
Sbjct: 667 LQKNEILLGQNGDIQSPKRLCTEYRSVLVERNSFTSPVKDRLLTFNTPKSKLPPPALQSA 726
Query: 723 FASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQI 782
FASPTRPNPG GGETCAET IN+FF KI KL A RIN MVERLQLSQ+IRE ++ LFQQI
Sbjct: 727 FASPTRPNPGAGGETCAETAINVFFSKIVKLGAFRINGMVERLQLSQEIREIIFRLFQQI 786
Query: 783 LNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA 842
L+QRT+LFFNRHIDQIILCCFYGVAKISQL+LTF+EII PQCKPQVFRSVFVDW+
Sbjct: 787 LSQRTTLFFNRHIDQIILCCFYGVAKISQLSLTFKEIISTIESNPQCKPQVFRSVFVDWS 846
Query: 843 SARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGS 902
SAR+ G++ Q+HVDIITFYN+IF+PAVKPLLVEL P GTA K NR SE + DG CPGS
Sbjct: 847 SARRHGKTGQEHVDIITFYNEIFIPAVKPLLVELAPVGTAQK-NRNSETINGTDGQCPGS 905
Query: 903 PKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSK 962
PK+S FP+LPDMSPKKVSA HNVYVSPLR+SKMDALIS+ SKSYYACVGESTHAYQS SK
Sbjct: 906 PKISPFPSLPDMSPKKVSAIHNVYVSPLRSSKMDALISNGSKSYYACVGESTHAYQSLSK 965
Query: 963 DLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQP 1022
DLT IN+RLN NR++RGTLNFD +VDVGLVSD++VANSL+LQNGS A+S+ A +K E+
Sbjct: 966 DLTAINNRLNGNRKLRGTLNFD--EVDVGLVSDTLVANSLWLQNGSCASSSGAPVKSERL 1023
Query: 1023 D 1023
D
Sbjct: 1024 D 1024
>gi|254789787|sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
gi|62956049|gb|AAY23367.1| retinoblastoma-related protein [Medicago sativa]
Length = 1025
Score = 1535 bits (3974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 766/1031 (74%), Positives = 878/1031 (85%), Gaps = 23/1031 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+DTKPSV + D +R + KN L++DE + KE + LF ETKHLL+AN
Sbjct: 9 MEDTKPSVVE---------NGDQAVSRFAEFSKNELALDEKSCKEAMDLFGETKHLLMAN 59
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S++GNG EEAER+WFAF+LY ++RL++KN E+ ++ + LC ILR KLNI DF
Sbjct: 60 VSSMGNGTIEEAERYWFAFILYSIKRLTQKNEESEKEEIENTGLTLCRILRAAKLNIADF 119
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GPILSN +G+DWEN+LEAKE+ AN +HL ILSK YKR++ EFF+ +DAN
Sbjct: 120 FKELPQFVVKAGPILSNRFGSDWENKLEAKEMHANTIHLKILSKYYKRVFEEFFVSTDAN 179
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+ +S S +G +S+ HRFGWLLFLALR+HAFSRFKDLVTCTNGL+SI+AILIIHVP R
Sbjct: 180 VENES---SVTGRVSECHRFGWLLFLALRVHAFSRFKDLVTCTNGLISIMAILIIHVPAR 236
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DS+RFVKKS+KGVDL+ASLC+IY+TSED+LRK ME+ N L+ADILKK PC AS
Sbjct: 237 FRNFNIQDSARFVKKSSKGVDLLASLCNIYNTSEDELRKTMEQANNLVADILKKTPCLAS 296
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC++ENLE+ D DGL YF++LM++SSL+SSLNILE DYD TRNKGELDER+FINEDDSL
Sbjct: 297 ECETENLEDFDKDGLTYFKDLMEESSLASSLNILENDYDQMTRNKGELDERLFINEDDSL 356
Query: 361 LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
L SGSLSGG+ G KRK+D + SP KTI SPLSP RS ASH NGI G SK+ TP
Sbjct: 357 LASGSLSGGSSVSAGGVKRKYDLMMSPSKTIISPLSPQRSPASHANGIPGSTNSKIAATP 416
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVI PLPSKPS ELERFL SCD+D+T++V+RRA IIL+AIFPSS LG+
Sbjct: 417 VSTAMTTAKWLRTVISPLPSKPSQELERFLTSCDRDITSEVVRRAQIILQAIFPSSPLGD 476
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
RCVTGSLQ ANLMDNIWAEQRRLEA+KLYYR+L MC AEAQ+L NLTSLLTNERFHR
Sbjct: 477 RCVTGSLQSANLMDNIWAEQRRLEAMKLYYRLLATMCRAEAQIL-GNNLTSLLTNERFHR 535
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIR+EESLPRELRRHLNSL
Sbjct: 536 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSL 595
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLES+VWEKGSSMYNSL VARP LSAEINRL +LA+PMPSLD IA HINFS GGL P
Sbjct: 596 EERLLESLVWEKGSSMYNSLAVARPALSAEINRLSMLAEPMPSLDEIAMHINFSCGGLPP 655
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
V SL K ET P QNGD+RSPKR CT+ R+VL ERN+FTSPVKDRLL L+NLKSK LPPPL
Sbjct: 656 VPSLPKPETLPAQNGDMRSPKRLCTENRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPL 715
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPT+PNPGGGGETCAETGI++FF KI KL AVRI+ MVERLQLSQQ RE+VY LF
Sbjct: 716 QSAFASPTKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQTRENVYSLF 775
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
Q+ILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV
Sbjct: 776 QRILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 835
Query: 840 DWASARQSG----RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNN 895
DW+ AR++G R+ Q+H+DII+FYN++F+P+VKPLLVELGP G +++++V E N
Sbjct: 836 DWSPARRNGGARHRTGQEHIDIISFYNEVFIPSVKPLLVELGPGGATVRSDQVPEANSKT 895
Query: 896 DGPC---PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
DG PGSP++S FP+LPDMSPKKVSA HNVYVSPLR+SKMDALISHSSKSYYACVGE
Sbjct: 896 DGHLVQNPGSPRISPFPSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGE 955
Query: 953 STHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
STHAYQSPSKDLT IN+RLNSNR+VRG L FD DVDVGLVSDSMVANSLYLQNGS+A+S
Sbjct: 956 STHAYQSPSKDLTAINNRLNSNRKVRGPLKFD--DVDVGLVSDSMVANSLYLQNGSSASS 1013
Query: 1013 TCAVLKPEQPD 1023
+ A LK EQPD
Sbjct: 1014 SGAPLKSEQPD 1024
>gi|75266074|sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protein 1; Short=PsRB1
gi|6681366|dbj|BAA88690.1| retinoblastoma-related protein [Pisum sativum]
Length = 1026
Score = 1529 bits (3960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/1030 (74%), Positives = 874/1030 (84%), Gaps = 20/1030 (1%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+DTKPSV +N D + R + KN L++DE + KE + LF ETKHLL+AN
Sbjct: 9 MEDTKPSVVMVDNG-------DQAQFRFAEFSKNELALDEKSCKEAMDLFGETKHLLVAN 61
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+ ++GNG EEAER WFAF+LY +++L++KN E + + LC ILR KLNI +F
Sbjct: 62 VLSMGNGTTEEAERNWFAFILYSIKKLAQKNEEIQKDEIENTGLTLCRILRAAKLNIAEF 121
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GPILSN+YG DWEN+LEAKE+ AN +HL ILSK YKR++ EFF+ +DAN
Sbjct: 122 FKELPQFVVKAGPILSNLYGPDWENKLEAKEMHANTIHLKILSKYYKRVFEEFFVSTDAN 181
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+ S S + +S+YHRFGWLLFLALR+HAFSRFKDLVTCTNGL+SILAILIIHVP R
Sbjct: 182 VENNS---SVTNRVSEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPAR 238
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FR+FNIHDSSRFVKKS GVDL+ASLC++Y+TSED+LRK +E+ N L+ADILKKKPC AS
Sbjct: 239 FRSFNIHDSSRFVKKSANGVDLLASLCNLYNTSEDELRKTIEQANNLVADILKKKPCLAS 298
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC++ENLEN D DGL YF++LM++SSL SSL++LE DYD+ TRN GELDER+FINEDDSL
Sbjct: 299 ECETENLENFDRDGLTYFKDLMEESSLPSSLSVLENDYDHMTRNNGELDERLFINEDDSL 358
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
L SGSLS G+V+ G KRK D + SP K ITSPLSPHRS ASH NGI AT + TPV
Sbjct: 359 LASGSLSRGSVSAGGVKRKIDLMTSPTKMITSPLSPHRSPASHANGIPSSATPMIAATPV 418
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PLPSKPS ELERFL SCDKD+T+DV+RRA IIL+AIFPSS LG+R
Sbjct: 419 STAMTTAKWLRTVISPLPSKPSQELERFLTSCDKDITSDVIRRAQIILQAIFPSSPLGDR 478
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
CVTGSLQ ANLMDNIWAEQRRLEALKLYYRVL MC AEAQ+L NLTSLLTNERFHRC
Sbjct: 479 CVTGSLQSANLMDNIWAEQRRLEALKLYYRVLATMCRAEAQIL-GNNLTSLLTNERFHRC 537
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIR+EESLPRELRRHLNSLE
Sbjct: 538 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRYEESLPRELRRHLNSLE 597
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLES+VWEKGSSMYNSL VARP LS EINRLGLLA+PM SLD IA INFS GGL PV
Sbjct: 598 ERLLESLVWEKGSSMYNSLAVARPALSVEINRLGLLAEPMRSLDEIAMDINFSCGGLPPV 657
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
SL K E QNGD RSPKRPCT++R+VL ERN+FTSPVKDRLL L+NLKSK LPPPLQ
Sbjct: 658 PSLPKPEPMSAQNGDPRSPKRPCTEHRNVLAERNSFTSPVKDRLLHLSNLKSKLLPPPLQ 717
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPT+PNPGGGGETCAETGI++FF KI KL AVRI+ MVERLQLSQQIRE+VYCLFQ
Sbjct: 718 SAFASPTKPNPGGGGETCAETGISVFFSKIVKLGAVRISGMVERLQLSQQIRENVYCLFQ 777
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+ILNQ TSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKP+VFRSVFVD
Sbjct: 778 RILNQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPEVFRSVFVD 837
Query: 841 WASARQSG----RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNND 896
W+SAR++G R+ Q+H+DII+FYN++F+P+VKPLLVE+GP G + +R+ E N+ ND
Sbjct: 838 WSSARRNGSCKQRTGQEHIDIISFYNEVFIPSVKPLLVEIGPGGATTRNDRIPEANNKND 897
Query: 897 G---PCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGES 953
G CPGSP++S FP+LPDMSPKKVSATHNVYVSPLR+SKMDALISHSSKSYYACVGES
Sbjct: 898 GHLAQCPGSPRISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSYYACVGES 957
Query: 954 THAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAST 1013
THAYQSPSKDLT IN+RLN NR+VRG LNFD DVDVGLVSDSMVANSLYLQNGS+A+S+
Sbjct: 958 THAYQSPSKDLTAINNRLNGNRKVRGPLNFD--DVDVGLVSDSMVANSLYLQNGSSASSS 1015
Query: 1014 CAVLKPEQPD 1023
A LK EQPD
Sbjct: 1016 GAPLKSEQPD 1025
>gi|356507327|ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1014
Score = 1526 bits (3950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/1022 (75%), Positives = 868/1022 (84%), Gaps = 15/1022 (1%)
Query: 6 PSVTASNNSESNAGDN--DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
P SN E +N D E+R + CKNGL+++E + KE LF ETKH+LL+N S+
Sbjct: 3 PPPAESNAMEDGKSENGGDQVESRFFEFCKNGLALEEKSCKEAANLFGETKHILLSNFSS 62
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKE 123
+GNG EEAER+WFAF+LY V++L +KN E ++ + + +LC ILR KLNI DFFKE
Sbjct: 63 MGNGTSEEAERYWFAFILYSVKKLIQKNDEGEKEDTENIGLSLCRILRAAKLNIADFFKE 122
Query: 124 LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDK 183
LPQF+VK+GP LSN+YG DWENRLEAKE+ AN +HL ILSK YKR++ EFF+ +D N +
Sbjct: 123 LPQFVVKAGPTLSNLYGTDWENRLEAKEMHANAIHLKILSKYYKRVFGEFFVATDTNAEI 182
Query: 184 QSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
S + + S+YHRFGWLLFLALR+HAFSRFKDLVTCTNGL+SILAILIIHVP RF N
Sbjct: 183 NSP---ITVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFWN 239
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECK 303
FNIHDSSRFVKKSNKGVDL+ASLC+IY+TSED+LRK MEK N +IADILKK+PC ASEC+
Sbjct: 240 FNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANNVIADILKKQPCLASECE 299
Query: 304 SENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGS 363
+ NLENID DGL YF++LM++SSL SSL++LEKDYD NK ELDER+FINEDDSLL S
Sbjct: 300 TGNLENIDKDGLTYFKDLMEESSLPSSLSMLEKDYDYMIHNKSELDERLFINEDDSLLAS 359
Query: 364 GSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTA 423
SLSGG+V+ G KRKFDS+ASP KTITSPLSPHRS ASH NGI G A SKM TPVSTA
Sbjct: 360 VSLSGGSVSAGGVKRKFDSMASPAKTITSPLSPHRSPASHANGIPGSANSKMAATPVSTA 419
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLRTVI PLPSKPS ELERFL SCD+D T+DV+RRA IIL+AIFPSS LGERCVT
Sbjct: 420 MTTAKWLRTVISPLPSKPSPELERFLTSCDRDATSDVVRRAQIILQAIFPSSPLGERCVT 479
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
GSLQ AN++DNIWAEQRRLEALKLYYRVLEAMC AEAQVLHA NLTSLLTNERFHRCMLA
Sbjct: 480 GSLQSANVVDNIWAEQRRLEALKLYYRVLEAMCRAEAQVLHATNLTSLLTNERFHRCMLA 539
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 603
CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL
Sbjct: 540 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 599
Query: 604 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSL 663
LESMVWEKGSSM+NSL VARP LSAEIN LGLLA+PMPSLD IA HINFS GGL PV +L
Sbjct: 600 LESMVWEKGSSMHNSLAVARPSLSAEINSLGLLAEPMPSLDEIAMHINFSCGGLPPVPTL 659
Query: 664 HKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAF 723
K E+ QNGDIRSPK R+VL+ERN+FTSPVKD LL LKSK PPPLQSAF
Sbjct: 660 PKLESPSNQNGDIRSPK------RNVLMERNSFTSPVKDCLLPCIILKSKLPPPPLQSAF 713
Query: 724 ASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQIL 783
ASPT+PNPGGGGETCAETGINIFF KI KL AVRI+ MVERLQLSQQIRE+VY LFQ+IL
Sbjct: 714 ASPTKPNPGGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYSLFQRIL 773
Query: 784 NQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS 843
NQ TSLFFNRHIDQIILCCFYGVAKISQLNLTF+EI+YNYRKQP CKPQVFRSVFVDW+
Sbjct: 774 NQWTSLFFNRHIDQIILCCFYGVAKISQLNLTFKEIVYNYRKQPHCKPQVFRSVFVDWSL 833
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNND--GPCPG 901
AR++GR+ Q+H+DIITFYN+IF+P+VKPLLVELGPAG K++R+ EVN N+ CPG
Sbjct: 834 ARRNGRTGQEHIDIITFYNEIFIPSVKPLLVELGPAGPTTKSDRIPEVNKNDGHLAQCPG 893
Query: 902 SPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPS 961
SPK+S FP LPDMSPKKVSATHNVYVSPLR+SKM+ALISHSSKSYYACVGESTHAYQSPS
Sbjct: 894 SPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPS 953
Query: 962 KDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQ 1021
KDLT IN+RLN NR+VRG LNFD DVD GLVSDSMVANSLYLQNGS A+S+ A K EQ
Sbjct: 954 KDLTAINNRLNGNRKVRGPLNFD--DVDFGLVSDSMVANSLYLQNGSCASSSGAPFKSEQ 1011
Query: 1022 PD 1023
PD
Sbjct: 1012 PD 1013
>gi|357515345|ref|XP_003627961.1| Retinoblastoma-related protein [Medicago truncatula]
gi|355521983|gb|AET02437.1| Retinoblastoma-related protein [Medicago truncatula]
Length = 1052
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/1058 (72%), Positives = 884/1058 (83%), Gaps = 50/1058 (4%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+DTK SV + D +R + KN L++DE + KE + LF ETKHLL+AN
Sbjct: 9 MEDTKLSVVE---------NGDQAVSRFAEFSKNELALDEKSCKEAMDLFGETKHLLMAN 59
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKL----- 115
+S++GNG EEAER+WFAF+LY ++RL++KN E+ ++ + LC ILR KL
Sbjct: 60 VSSMGNGTIEEAERYWFAFILYSIKRLTQKNEESEKEEIENTGLTLCRILRAAKLKYFSD 119
Query: 116 ----------------------NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQ 153
+I DFFKELPQF+VK+GPILSN +G+DWEN+LEAKE+
Sbjct: 120 LYLVSKFVVWSFINWYVYLVLNSIADFFKELPQFVVKAGPILSNRFGSDWENKLEAKEMH 179
Query: 154 ANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAF 213
AN +HL ILSK YKR++ EFF+ +DAN + +S S +G +S+ HRFGWLLFLALR+HAF
Sbjct: 180 ANTIHLKILSKYYKRVFEEFFVSTDANVENKS---SVTGRVSECHRFGWLLFLALRVHAF 236
Query: 214 SRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTS 273
SRFKDLVTCTNGL+SI+AILIIHVP RFRNFNIHDS+RFVKKS+KGVDL+ASLC+IY+TS
Sbjct: 237 SRFKDLVTCTNGLISIMAILIIHVPARFRNFNIHDSARFVKKSSKGVDLLASLCNIYNTS 296
Query: 274 EDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI 333
ED+LRK ME+ N L+ADILKK PC ASEC++ENLE+ D DGL YF++LM++SSL+SSLNI
Sbjct: 297 EDELRKTMEQANNLVADILKKTPCLASECETENLEDFDKDGLTYFKDLMEESSLASSLNI 356
Query: 334 LEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGA-KRKFDSLASPVKTITS 392
LE DYD TRNKGELDER+FINEDDSLL SGSLSGG+ G KRK+D + SP KTITS
Sbjct: 357 LENDYDQMTRNKGELDERLFINEDDSLLASGSLSGGSSVSAGGVKRKYDLMMSPAKTITS 416
Query: 393 PLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSC 452
PLSP RS ASH NGI G A SK+ TPVSTAMTTAKWLRTVI PLPSKPS ELERFL SC
Sbjct: 417 PLSPQRSPASHANGIPGSANSKIAATPVSTAMTTAKWLRTVISPLPSKPSQELERFLTSC 476
Query: 453 DKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
D+D+T++V+RRA IIL+AIFPSS LG+RCVTGSLQ ANLMDNIWAEQRRLEA+KLYYR+L
Sbjct: 477 DRDITSEVVRRAQIILQAIFPSSPLGDRCVTGSLQSANLMDNIWAEQRRLEAMKLYYRLL 536
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAF 572
MC AEAQ+L NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAF
Sbjct: 537 ATMCRAEAQIL-GNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAF 595
Query: 573 DLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINR 632
DLSKVIESFIR+EESLPRELRRHLNSLEERLLES+VWEKGSSMYNSL VARP LSAEINR
Sbjct: 596 DLSKVIESFIRYEESLPRELRRHLNSLEERLLESLVWEKGSSMYNSLAVARPALSAEINR 655
Query: 633 LGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVE 692
LG+LA+PMPSLD IA INFS GGL PV SL K ET P QNGD+RSPKR CT+ R+VLVE
Sbjct: 656 LGMLAEPMPSLDEIAMQINFSCGGLPPVPSLPKPETLPAQNGDMRSPKRLCTENRNVLVE 715
Query: 693 RNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINK 752
RN+FTSPVKDRLL L+NLKSK LPPPLQSAFASPT+PNPGGGGETCAETGI++FF KI K
Sbjct: 716 RNSFTSPVKDRLLHLSNLKSKLLPPPLQSAFASPTKPNPGGGGETCAETGISVFFSKIVK 775
Query: 753 LAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL 812
L AVRI+ MVERLQLSQQIRE+VY LFQ+ILNQ TSLFFNRHIDQIILCCFYGVAKISQL
Sbjct: 776 LGAVRISGMVERLQLSQQIRENVYSLFQRILNQWTSLFFNRHIDQIILCCFYGVAKISQL 835
Query: 813 NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG----RSEQDHVDIITFYNKIFVPA 868
NLTFREIIYNYRKQPQCKPQVFRSVFVDW+SAR++G R+ Q+H+DII+FYN++F+P+
Sbjct: 836 NLTFREIIYNYRKQPQCKPQVFRSVFVDWSSARRNGGSRHRTGQEHIDIISFYNEVFIPS 895
Query: 869 VKPLLVELGPAGTAMKTNRVSEVNHNNDGPC---PGSPKVSVFPALPDMSPKKVSATHNV 925
VKPLLVELGP G +++++V E N+ NDG PGSP++S FP+LPDMSPKKVSA HNV
Sbjct: 896 VKPLLVELGPGGATVRSDQVPEANNKNDGHLVQNPGSPRISPFPSLPDMSPKKVSAAHNV 955
Query: 926 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFDD 985
YVSPLR+SKMDALISHSSKSYYACVGESTHAYQSPSKDLT IN+RLNSNR+VRG L FD
Sbjct: 956 YVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNRKVRGPLKFD- 1014
Query: 986 VDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPD 1023
DVDVGLVSDSMVANSLYLQNGS+A+S+ A LK EQPD
Sbjct: 1015 -DVDVGLVSDSMVANSLYLQNGSSASSSGAPLKSEQPD 1051
>gi|387166314|gb|AFJ64569.1| retinoblastoma-related protein 1 [Brassica rapa]
Length = 1016
Score = 1495 bits (3870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/1032 (72%), Positives = 851/1032 (82%), Gaps = 27/1032 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L +LC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEAVLLELCEKVLSLEGSICDEALKLFTETKPILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAFVLY V+ L+ + + Q S DN+FNLC ILR +K+NIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFVLYSVKMLTVRKQVDGQSVSGDNKFNLCQILRALKINIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF VK+GP+L +YGADWENRL+AKELQANFVHLS+LSK YKR Y+EFFL DAN
Sbjct: 116 FKELPQFAVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYQEFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVSILAILIIHVP R
Sbjct: 176 AEKTSA--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +K VDL+ASLC IYD SED+LRKIM++ N LI ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVKKGDKEVDLVASLCKIYDASEDELRKIMDQANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK + L+NI+ DGL YFE+L+D++S+S+SL LEKDY+++ NKGELDERVFINE+DSL
Sbjct: 294 TCKIDKLDNINPDGLTYFEDLLDETSISTSLITLEKDYEDSVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN+TG KRK DSL+SP +T SPLSPH+S A+ N I+G K+ TPV
Sbjct: 354 LGSGSLSAGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAI--KLTATPV 411
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPL KPS LE FLKSCD+D+TTDV RRAH+ILEAIFP+S LG+R
Sbjct: 412 STAMTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDR 471
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWAEQRRLEA+KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 472 CAGGSLQPVNLMDDIWAEQRRLEAVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRC 531
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 532 MLACSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLE 591
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP+L+ EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 592 ERLLESMVWEKGSSMYNSLIVARPLLALEINRLGLLAEPMPSLDAIAALINFSEGS-NHA 650
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNGD++SPKR CTDYRS+LVERN+FTSPVKDRLL N+KSK LPPPLQ
Sbjct: 651 PSIQKHETCPGQNGDMKSPKRQCTDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQ 710
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVY LFQ
Sbjct: 711 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQ 770
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 771 HVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 830
Query: 841 WASARQ--SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
+R+ GR DHVDIITFYN+IF+PAVKPLLVE+ P +K ++ E N+ +G
Sbjct: 831 SHQSRRQGQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIP----VKKDQAMEANNKPEGH 886
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
CPGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 887 CPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQ 946
Query: 959 SPSKDLTDINHRLN--SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYL----QNGS-AAA 1011
SPSKDL+ IN+RLN S R R TL F D + GLVSDSMV NSLYL QNGS A++
Sbjct: 947 SPSKDLSAINNRLNNCSTNRKR-TLKF---DAEAGLVSDSMVGNSLYLQNQNQNGSDASS 1002
Query: 1012 STCAVLKPEQPD 1023
S A LK E D
Sbjct: 1003 SGGAPLKTEPVD 1014
>gi|387166324|gb|AFJ64574.1| retinoblastoma-related protein 2 [Brassica juncea]
Length = 1016
Score = 1489 bits (3855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/1032 (72%), Positives = 848/1032 (82%), Gaps = 27/1032 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L +LC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEAVLLELCEKVLSLEGSICDEALKLFTETKPILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAFVLY V+ L+ + + Q S DN+FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFVLYSVKMLTVRKQVDGQSVSGDNKFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF VK+GP+L +YGADWENRL+AKELQANFVHLS+LSK YKR Y+EFFL DAN
Sbjct: 116 FKELPQFAVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYQEFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVSILAILIIHVP R
Sbjct: 176 AEKTSA--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +K VDL+ASLC IYD SED+LRKIM++ N LI ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVKKGDKEVDLVASLCKIYDASEDELRKIMDQANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK + L+NI+ DGL YFE+L+D++S+S+SL LEKDY+++ NKGELDERVFINE+DSL
Sbjct: 294 TCKIDKLDNINPDGLTYFEDLLDETSISTSLITLEKDYEDSVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN+TG KRK DSL+SP +T SPLSPH+S A+ N I+G K+ TPV
Sbjct: 354 LGSGSLSAGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAI--KLTATPV 411
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPL KPS LE FLKSCD+D+TTDV RRAH+ILEAIFP+S LG+R
Sbjct: 412 STAMTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDR 471
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWAEQRRLEA+KL YRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 472 CAGGSLQPVNLMDDIWAEQRRLEAVKLCYRVLEAMCIAEAQILHANNLNSLLTNERFHRC 531
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 532 MLACSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLE 591
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP+L+ EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 592 ERLLESMVWEKGSSMYNSLIVARPLLALEINRLGLLAEPMPSLDAIAALINFSEGS-NHA 650
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNGD++SPKR CTDYRS+LVERN+FTSPVKDRLL N+KSK LPPPLQ
Sbjct: 651 PSIQKHETCPGQNGDMKSPKRQCTDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQ 710
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVY LFQ
Sbjct: 711 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQ 770
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 771 HVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 830
Query: 841 WASARQ--SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
+R+ GR DHVDIITFYN+IF+PAVKPLLVE+ P +K ++ E N+ +G
Sbjct: 831 SHQSRRQGQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIP----VKKDQAMEANNKPEGH 886
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
CPGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 887 CPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQ 946
Query: 959 SPSKDLTDINHRLN--SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYL----QNGS-AAA 1011
SP KDL+ IN+RLN S R R TL F D + GLVSDSMV NSLYL QNGS A +
Sbjct: 947 SPPKDLSAINNRLNNCSTNRKR-TLKF---DAEAGLVSDSMVGNSLYLQNQNQNGSDALS 1002
Query: 1012 STCAVLKPEQPD 1023
S A LK E D
Sbjct: 1003 SGGAPLKTEPVD 1014
>gi|387166322|gb|AFJ64573.1| retinoblastoma-related protein 1 [Brassica juncea]
Length = 1017
Score = 1488 bits (3851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/1033 (72%), Positives = 849/1033 (82%), Gaps = 28/1033 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L DLC+ LS++ + E +KLF +TKH++ A
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEATLLDLCEKVLSLEGSICDEALKLFIDTKHIMSAT 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAFVLY V+ L+ + + Q S N FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFVLYSVKMLTVRKEVDGQSVSGANGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWE+RL+AKELQANFVHLS+LSK YKR YREFFL DAN
Sbjct: 116 FKELPQFVVKAGHVLCELYGADWESRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
++ +AS++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVSILAILIIHVP R
Sbjct: 176 A--ETTSASSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DSSRFVKK +K VDLIASLC IYD SED+LRK M+K N LI ILKKKP AS
Sbjct: 234 FRNFNIQDSSRFVKKGDKDVDLIASLCKIYDASEDELRKTMDKANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK + L+NI+ DGL YFE+L+D++S+S+SL LEKDYD+A NKGELDERVFINE+DSL
Sbjct: 294 TCKVDKLDNINPDGLTYFEDLLDETSISTSLITLEKDYDDAVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN++G KRK DSL+SP +T SPLSPH+S A+ N I+GG K+ TPV
Sbjct: 354 LGSGSLSAGAVNVSGVKRKIDSLSSPARTFISPLSPHKSPAAKTNNISGGI--KLTATPV 411
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPL KPS LE FLKSCD+D+TTD+ RRAH+ILEAIFP+S LG+R
Sbjct: 412 STAMTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDITRRAHVILEAIFPNSSLGDR 471
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWA+QRRLEA+KLY+RVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 472 CAGGSLQPVNLMDDIWAQQRRLEAVKLYFRVLEAMCKAEAQILHANNLNSLLTNERFHRC 531
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 532 MLACSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLE 591
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP+L+ EINRLGLLA+PMPSLDAIA INFS GL+
Sbjct: 592 ERLLESMVWEKGSSMYNSLIVARPLLALEINRLGLLAEPMPSLDAIAALINFSE-GLNHA 650
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNGDI+SPKR CTDYRS+LVERN+FTSPVKDRLL N+KSK LPPPLQ
Sbjct: 651 PSVQKHETCPGQNGDIKSPKRQCTDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQ 710
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVY LFQ
Sbjct: 711 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQ 770
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 771 HVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 830
Query: 841 WASARQ--SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
R+ GR DHVDIITFYN+IF+PAVKPLLVE+ P +K ++ E N+ +G
Sbjct: 831 SYQCRRQGQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIP----VKNDQSMEANNKPEGQ 886
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
PGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 887 RPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQ 946
Query: 959 SPSKDLTDINHRLN--SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYL----QNGSAAAS 1012
SPSKDL+ IN+RLN S R R TL F DV+ GLVSDSMV NSLYL QNG+ A+S
Sbjct: 947 SPSKDLSAINNRLNNCSTNRKR-TLKF---DVEAGLVSDSMVGNSLYLQNQNQNGNDASS 1002
Query: 1013 T--CAVLKPEQPD 1023
+ A LK E D
Sbjct: 1003 SGGGAPLKTEPVD 1015
>gi|387166320|gb|AFJ64572.1| retinoblastoma-related protein 2 [Brassica nigra]
Length = 1023
Score = 1484 bits (3842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/1015 (72%), Positives = 833/1015 (82%), Gaps = 19/1015 (1%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L DLC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEATLLDLCEKVLSLEGSVCDEALKLFSETKRILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAF+LY V+ L+ + + Q S D+ FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFILYSVKMLTVRKQVDGQSVSGDSGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP+L +YGADWE RL+AKELQANFVHLS+LSK YKR YREFFL DAN
Sbjct: 116 FKELPQFVVKAGPVLCELYGADWEIRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVS+LAILIIHVP R
Sbjct: 176 AEKTSA--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSVLAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DSSRFVKK +K VDL+ASLC IYD SED+LRKIM+K N LI ILKKKP AS
Sbjct: 234 FRNFNIQDSSRFVKKGDKDVDLVASLCKIYDASEDELRKIMDKANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK++ L+NI DGL YFE+L+D++S+S+SL LEKDY++ NKGELDERVFINE+DSL
Sbjct: 294 ACKTDKLDNISPDGLTYFEDLLDEASISTSLTTLEKDYNDTVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNIT-GAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LGSGSLS GAVN+T G KRK DSL+SP +T SPLSPH+S A+ +GG +K+ TP
Sbjct: 354 LGSGSLSAGAVNVTTGVKRKIDSLSSPARTFISPLSPHKSPAAKTTITSGG--NKLTATP 411
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVICPLPSKPS LE FLKSCD+D+T DV RRAH+ILEAIFP+S LG+
Sbjct: 412 VSTAMTTAKWLRTVICPLPSKPSPGLEHFLKSCDRDITHDVTRRAHVILEAIFPNSSLGD 471
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
+C GSLQ NLMD+IWA+QRRLEA+KLYYRVLEAMC AEAQ+LH NL SLLTNERFHR
Sbjct: 472 QCAGGSLQPVNLMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHR 531
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHK++TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSL
Sbjct: 532 CMLACSAELVLATHKSITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSL 591
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSSMYNSL VA+P L+ EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 592 EERLLESMVWEKGSSMYNSLIVAKPSLALEINRLGLLAEPMPSLDAIAALINFSEGSSNH 651
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
S+ K E PGQNGDI+SPKR CTDYRS+LVER++F SPVKDRLL L N+KSK LPPPL
Sbjct: 652 ASSIQKPEAGPGQNGDIKSPKRLCTDYRSILVERSSFASPVKDRLLALGNVKSKTLPPPL 711
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFA+PTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYCLF
Sbjct: 712 QSAFATPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLF 771
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
Q++L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSVFV
Sbjct: 772 QRVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFV 831
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
D + R+ GR DHVDIITFYN IF+PAVKPLLVE+ P +K ++ E N N +G C
Sbjct: 832 DSSHCRRQGRVGPDHVDIITFYNDIFIPAVKPLLVEIVP----VKKDQAVEANKNPEGTC 887
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
PGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQS
Sbjct: 888 PGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQS 947
Query: 960 PSKDLTDI--NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
PSKDL+ I N++ + TL F DV+ GLVSDSMV NSLY AS
Sbjct: 948 PSKDLSAINNRLNNNNSSNRKRTLKF---DVEAGLVSDSMVGNSLYQNQNETDAS 999
>gi|387166318|gb|AFJ64571.1| retinoblastoma-related protein 1 [Brassica nigra]
Length = 1017
Score = 1484 bits (3842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/1033 (72%), Positives = 847/1033 (81%), Gaps = 28/1033 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + G EA L DLC+ LS++ + E +KLF +TKH++ A
Sbjct: 1 MEEVQPPVTPPIDPNGKRG-----EATLLDLCEKVLSLEGSICDEALKLFIDTKHIMSAT 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAFVLY V+ L+ + + Q S N FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFVLYSVKMLTVRKEVDGQSVSGANGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWE+RL+AKELQANFVHLS+LSK YKR YREFFL DAN
Sbjct: 116 FKELPQFVVKAGHVLCELYGADWESRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
++ +AS++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVSILAILIIHVP R
Sbjct: 176 A--ETTSASSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DSSRFVKK +K VDLIASLC IYD SED+LRK M+K N LI ILKKKP AS
Sbjct: 234 FRNFNIQDSSRFVKKGDKDVDLIASLCKIYDASEDELRKTMDKANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK + L+NI+ DGL YFE+L+D++S+S+SL LEKDYD+A NKGELDERVFINE+DSL
Sbjct: 294 TCKVDKLDNINPDGLTYFEDLLDETSISTSLITLEKDYDDAVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN++G KRK DSL+SP +T SPLSPH+S A+ N I+GG K+ TPV
Sbjct: 354 LGSGSLSAGAVNVSGVKRKIDSLSSPARTFISPLSPHKSPAAKTNNISGGI--KLTATPV 411
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPL KPS LE F +SCD+D+TTD+ RRAH+ILEAIFP+S LG+R
Sbjct: 412 STAMTTAKWLRTVICPLLPKPSPGLEHFPQSCDRDITTDITRRAHVILEAIFPNSSLGDR 471
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWA+QRRLEA+KLY+RVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 472 CAGGSLQPVNLMDDIWAQQRRLEAVKLYFRVLEAMCKAEAQILHANNLNSLLTNERFHRC 531
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 532 MLACSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLE 591
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP+L+ EINRLGLLA+PMPSLDAIA INFS GL+
Sbjct: 592 ERLLESMVWEKGSSMYNSLIVARPLLALEINRLGLLAEPMPSLDAIAALINFSE-GLNHA 650
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNGDI+SPKR CTDYRS+LVERN+FTSPVKDRLL N+KSK LPPPLQ
Sbjct: 651 PSVQKHETCPGQNGDIKSPKRQCTDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQ 710
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVY LFQ
Sbjct: 711 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQ 770
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 771 HVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 830
Query: 841 WASARQ--SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
R+ GR DHVDIITFYN+IF+PAVKPLLVE+ P +K ++ E N+ +G
Sbjct: 831 SYQCRRQGQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIP----VKNDQSMEANNKPEGQ 886
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
PGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 887 RPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQ 946
Query: 959 SPSKDLTDINHRLN--SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYL----QNGSAAAS 1012
SPSKDL+ IN+RLN S R R TL F DV+ GLVSDSMV NSLYL QNG+ A+S
Sbjct: 947 SPSKDLSAINNRLNNCSTNRKR-TLKF---DVEAGLVSDSMVGNSLYLQNQNQNGNDASS 1002
Query: 1013 T--CAVLKPEQPD 1023
+ A LK E D
Sbjct: 1003 SGGGAPLKTEPVD 1015
>gi|12322049|gb|AAG51072.1|AC069472_12 retinoblastoma-related protein, putative; 44014-38352 [Arabidopsis
thaliana]
Length = 1088
Score = 1482 bits (3837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/1001 (73%), Positives = 835/1001 (83%), Gaps = 20/1001 (1%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT E N +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 77 MEEVQPPVTPP--IEPNG---KRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 131
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S IG+G EE ERFWFAF+LY V+RLS + + S DNEFNLC ILR +KLNIVDF
Sbjct: 132 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGLSVSGDNEFNLCQILRALKLNIVDF 191
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +REFFL DAN
Sbjct: 192 FKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFREFFLTYDAN 251
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP R
Sbjct: 252 AEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPCR 309
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP AS
Sbjct: 310 FRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPAS 369
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC+++ L+NID DGL YFE+L++++S+S+SL LEKDY + KGELDERVFINE+DSL
Sbjct: 370 ECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERVFINEEDSL 426
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G +K+ TPV
Sbjct: 427 LGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGA--TKLAATPV 484
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +
Sbjct: 485 STAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQ 544
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 545 CGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRC 604
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 605 MLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 664
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INFS G +
Sbjct: 665 ERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSDGA-NHA 723
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDRLL L N+KSK LPPPLQ
Sbjct: 724 SSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQ 783
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC FQ
Sbjct: 784 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQ 843
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 844 HVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 903
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G CP
Sbjct: 904 ALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQCP 959
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQSP
Sbjct: 960 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSP 1019
Query: 961 SKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SKDL+ IN+RLN++ + TLNF D + G+VSDSMVANS
Sbjct: 1020 SKDLSAINNRLNNSSNRKRTLNF---DAEAGMVSDSMVANS 1057
>gi|334185278|ref|NP_001189868.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
gi|332641659|gb|AEE75180.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
Length = 1012
Score = 1481 bits (3835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/1001 (73%), Positives = 835/1001 (83%), Gaps = 20/1001 (1%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT E N +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 1 MEEVQPPVTPP--IEPNG---KRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S IG+G EE ERFWFAF+LY V+RLS + + S DNEFNLC ILR +KLNIVDF
Sbjct: 56 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGLSVSGDNEFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +REFFL DAN
Sbjct: 116 FKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP R
Sbjct: 176 AEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC+++ L+NID DGL YFE+L++++S+S+SL LEKDY + KGELDERVFINE+DSL
Sbjct: 294 ECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERVFINEEDSL 350
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G +K+ TPV
Sbjct: 351 LGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGA--TKLAATPV 408
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +
Sbjct: 409 STAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQ 468
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 469 CGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRC 528
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 529 MLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 588
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INFS G +
Sbjct: 589 ERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSDGA-NHA 647
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDRLL L N+KSK LPPPLQ
Sbjct: 648 SSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQ 707
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC FQ
Sbjct: 708 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQ 767
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 768 HVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 827
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G CP
Sbjct: 828 ALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQCP 883
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQSP
Sbjct: 884 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSP 943
Query: 961 SKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SKDL+ IN+RLN++ + TLNF D + G+VSDSMVANS
Sbjct: 944 SKDLSAINNRLNNSSNRKRTLNF---DAEAGMVSDSMVANS 981
>gi|387166328|gb|AFJ64576.1| retinoblastoma-related protein 4 [Brassica juncea]
Length = 1017
Score = 1481 bits (3834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/1008 (72%), Positives = 828/1008 (82%), Gaps = 25/1008 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L DLC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEATLLDLCEKVLSLEGSVCDEALKLFTETKRILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAF+LY V+ L+ + + Q S DN FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFILYSVKMLTVRKQVDGQSVSGDNGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP+L +YGADWENRL+AKELQANFVHLS+LSK YKR YREFFL DAN
Sbjct: 116 FKELPQFVVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+ SA +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVS+LAILIIHVP R
Sbjct: 176 AENTSA--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSVLAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DSSRFVKK +K VDL+ASLC IYD SED+LRKIM K N+LI ILKKKP AS
Sbjct: 234 FRNFNIQDSSRFVKKGDKDVDLVASLCKIYDASEDELRKIMNKANSLIETILKKKPSPAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK++ L+NI TDGL YFE+L+D+SS+S+SL LEKDYD+ NKGELDERVFINE+DSL
Sbjct: 294 ACKTDTLDNIITDGLTYFEDLLDESSISTSLTTLEKDYDDTVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN+TGAKRK DSL+SP +T SPLSPH+S A A S + TPV
Sbjct: 354 LGSGSLSAGAVNLTGAKRKIDSLSSPARTFISPLSPHKSPA---------AKSTVTATPV 404
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTV CPLP KPS LE FLKSCD+D+T DV RRAH+ILEAIFP+S LG++
Sbjct: 405 STAMTTAKWLRTVTCPLPPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGDQ 464
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWA+QRRLEA+KLYYRVLEAMC AEAQ+LH NL SLLTNERFHRC
Sbjct: 465 CAGGSLQPVNLMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRC 524
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVL+RTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 525 MLACSAELVLATHKSITMLFPAVLDRTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 584
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWE+GSSMYNSL VA+ L+ EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 585 ERLLESMVWERGSSMYNSLIVAKAPLALEINRLGLLAEPMPSLDAIAALINFSEGSSNHA 644
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ K E PGQNGDI+SPKR CTDYRS+LVER++F SPVK+RLL L N+KSK LPPPLQ
Sbjct: 645 SSVQKAEACPGQNGDIKSPKRLCTDYRSILVERSSFASPVKERLLALGNVKSKTLPPPLQ 704
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFA+PTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYCLFQ
Sbjct: 705 SAFATPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLFQ 764
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
++L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSVFVD
Sbjct: 765 RVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVD 824
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
+ R+ GR DHVDIITFYN +F+PAVKPLLVE+ P +K + E N+N +G CP
Sbjct: 825 SSQGRRQGRVGPDHVDIITFYNDVFIPAVKPLLVEIVP----VKKGQAVEANNNPEGHCP 880
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQSP
Sbjct: 881 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSP 940
Query: 961 SKDLTDI--NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQN 1006
SKDL+ I N++ + TL F DV+ GLVSDSMV NSL LQN
Sbjct: 941 SKDLSAINNRLNNNNSSNRKRTLKF---DVEAGLVSDSMVGNSLSLQN 985
>gi|297834028|ref|XP_002884896.1| hypothetical protein ARALYDRAFT_478590 [Arabidopsis lyrata subsp.
lyrata]
gi|297330736|gb|EFH61155.1| hypothetical protein ARALYDRAFT_478590 [Arabidopsis lyrata subsp.
lyrata]
Length = 1012
Score = 1479 bits (3830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/1002 (72%), Positives = 836/1002 (83%), Gaps = 21/1002 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S IG+G EE ERFWFAF+LY V+RLS + + Q S DN FNLC ILR +KLNIVDF
Sbjct: 56 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGQSVSGDNGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
F+ELPQF++K+G +L +YGADWENRL+AKELQANFVHLS+LSK YKR + EFFL DAN
Sbjct: 116 FRELPQFVIKAGSVLGELYGADWENRLQAKELQANFVHLSLLSKYYKRGFHEFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +ST Y++D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP R
Sbjct: 176 AEKNSANSST--YLADSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFV K +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVNKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
+C+++ L+NID DGL YFE+L+++ S+SSSL +LEKDYD+ KGELDERVFINE+DSL
Sbjct: 294 DCQTDKLDNIDPDGLTYFEDLLEEMSISSSLIMLEKDYDDG---KGELDERVFINEEDSL 350
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVNITG KRK D+L+SP +T+ SPLSPH+S A+ NGI+G +K+ TPV
Sbjct: 351 LGSGSLSAGAVNITGVKRKIDALSSPARTLISPLSPHKSPAAKTNGISGA--TKLAATPV 408
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +
Sbjct: 409 STAMTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQ 468
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ +LMD+IWAEQRRLEALKLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 469 CGGGSLQAVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRC 528
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 529 MLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 588
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INFS G++
Sbjct: 589 ERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSE-GVNHA 647
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET GQNG IRSPKR CTDYRS+LVERN+FTSPVKDRLL L N+KSK LPPPLQ
Sbjct: 648 SSIQKHETCSGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQ 707
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC FQ
Sbjct: 708 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQ 767
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL F+RHIDQIILCCFYGV+KISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 768 HVLAQRTSLLFSRHIDQIILCCFYGVSKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 827
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G CP
Sbjct: 828 SLQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQCP 883
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQSP
Sbjct: 884 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSP 943
Query: 961 SKDLTDI-NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SKDL+ I N NS+ + TLNF DV+ GLVSDSMVANS
Sbjct: 944 SKDLSAINNRLNNSSSNRKRTLNF---DVEAGLVSDSMVANS 982
>gi|15795149|dbj|BAB03137.1| retinoblastoma-related protein [Arabidopsis thaliana]
Length = 1021
Score = 1477 bits (3825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 733/1002 (73%), Positives = 832/1002 (83%), Gaps = 21/1002 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT E N +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 9 MEEVQPPVTPP--IEPNG---KRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 63
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S IG+G EE ERFWFAF+LY V+RLS + + S DNEFNLC ILR +KLNIVDF
Sbjct: 64 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGLSVSGDNEFNLCQILRALKLNIVDF 123
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +REFFL DAN
Sbjct: 124 FKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFREFFLTYDAN 183
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP R
Sbjct: 184 AEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPCR 241
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP AS
Sbjct: 242 FRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPAS 301
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC+++ L+NID DGL YFE+L++++S+S+SL LEKDY + KGELDERVFINE+DSL
Sbjct: 302 ECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERVFINEEDSL 358
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G +K+ TPV
Sbjct: 359 LGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGA--TKLAATPV 416
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +
Sbjct: 417 STAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQ 476
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 477 CGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRC 536
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 537 MLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 596
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INFS G +
Sbjct: 597 ERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSDGA-NHA 655
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDRLL L N+KSK LPPPLQ
Sbjct: 656 SSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQ 715
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC FQ
Sbjct: 716 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQ 775
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 776 HVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 835
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G CP
Sbjct: 836 ALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQCP 891
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQSP
Sbjct: 892 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSP 951
Query: 961 SKDLTDI-NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SKDL+ I N NS+ + TLNF D + G+VSDSMVANS
Sbjct: 952 SKDLSAINNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 990
>gi|30682129|ref|NP_566417.3| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
gi|75263948|sp|Q9LKZ3.1|RBR1_ARATH RecName: Full=Retinoblastoma-related protein 1; Short=AtRBR;
Short=AtRBR1
gi|8777927|gb|AAF79146.1|AF245395_1 retinoblastoma-related protein [Arabidopsis thaliana]
gi|23297484|gb|AAN12980.1| putative retinoblastoma-related protein [Arabidopsis thaliana]
gi|332641658|gb|AEE75179.1| Retinoblastoma-related protein 1 [Arabidopsis thaliana]
Length = 1013
Score = 1477 bits (3823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 733/1002 (73%), Positives = 832/1002 (83%), Gaps = 21/1002 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT E N +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 1 MEEVQPPVTPP--IEPNG---KRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S IG+G EE ERFWFAF+LY V+RLS + + S DNEFNLC ILR +KLNIVDF
Sbjct: 56 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGLSVSGDNEFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +REFFL DAN
Sbjct: 116 FKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP R
Sbjct: 176 AEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC+++ L+NID DGL YFE+L++++S+S+SL LEKDY + KGELDERVFINE+DSL
Sbjct: 294 ECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERVFINEEDSL 350
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G +K+ TPV
Sbjct: 351 LGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGA--TKLAATPV 408
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +
Sbjct: 409 STAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQ 468
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 469 CGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRC 528
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 529 MLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 588
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+PMPSLDAIA INFS G +
Sbjct: 589 ERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPMPSLDAIAALINFSDGA-NHA 647
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDRLL L N+KSK LPPPLQ
Sbjct: 648 SSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQ 707
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC FQ
Sbjct: 708 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQ 767
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 768 HVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 827
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G CP
Sbjct: 828 ALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQCP 883
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQSP
Sbjct: 884 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSP 943
Query: 961 SKDLTDI-NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SKDL+ I N NS+ + TLNF D + G+VSDSMVANS
Sbjct: 944 SKDLSAINNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 982
>gi|75253426|sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1
gi|51538007|gb|AAU05979.1| retinoblastoma protein [Nicotiana benthamiana]
Length = 1003
Score = 1476 bits (3822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 749/1015 (73%), Positives = 840/1015 (82%), Gaps = 23/1015 (2%)
Query: 12 NNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEE 71
+NSE G D+ E R TD CKNGLS+ E+ E KLF ++KHLLL+N S IG E
Sbjct: 8 SNSEETGGV-DSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIGVITQEG 66
Query: 72 AERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
ER+WF FVLY V+RLSEK N G N F+LC ILR KLN+VDFFKELPQF++K
Sbjct: 67 VERYWFVFVLYSVKRLSEKEAGNSNNGDKGNAFSLCQILRGAKLNVVDFFKELPQFILKV 126
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTS 191
GP LSN+YG+DWE RLE KELQ NFVHLS+LSK YKR Y+E FL S N DK SA ++++
Sbjct: 127 GPTLSNLYGSDWEKRLEVKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPSATSNSA 186
Query: 192 GYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSR 251
++ Y+RFGWLLFL+LRIH FSRFKDLVTCTNGLVS+LAIL+IHVPVRFRNFNI DSSR
Sbjct: 187 IHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILMIHVPVRFRNFNIDDSSR 246
Query: 252 FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENID 311
FVKK +K VDL+ASL IY TS DDLR+ M+K N LI + LKKKPC ASE ++ENL+N+D
Sbjct: 247 FVKKGDK-VDLLASLSKIYQTSIDDLRETMDKVNNLITEKLKKKPCLASEFRTENLDNLD 305
Query: 312 TDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAV 371
TDGL YFE+LM++S LSSS++ LEKDY +A +NKGELDER+F+NE+DSLLGSGSLSGGAV
Sbjct: 306 TDGLTYFEDLMEESCLSSSVSTLEKDYSDAIQNKGELDERIFVNEEDSLLGSGSLSGGAV 365
Query: 372 NITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV-TPVSTAMTTAKWL 430
N+ G KRKFD++ASP KT+TS LSP+RS PN A SKM TPVSTAMTTA+WL
Sbjct: 366 NMNGTKRKFDAMASPAKTVTSTLSPYRS----PNC----ANSKMTAATPVSTAMTTARWL 417
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTG-SLQGA 489
RTVI PL KPSAELERFL SCD+DVT DV+RRA IILEAIFPSSG E C G SLQ
Sbjct: 418 RTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQST 477
Query: 490 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELV 549
+LMDNIWAEQRR EALKLYYRVL+ MCTAE+Q+L+ NLTSLLTNERFHRCMLACSAELV
Sbjct: 478 SLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELV 537
Query: 550 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW
Sbjct: 538 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 597
Query: 610 EKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETS 669
EKGSSMYNSL VA+P L+AEINR+GLLA+PMPSLDAIA HIN SSG L P+ SLHK+ +
Sbjct: 598 EKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLA 657
Query: 670 P-GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTR 728
P GQ GDIRSPK+ C++YRSVLVERN+FTSPVKDR L LNN+KSK PP L SAFASPTR
Sbjct: 658 PNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTR 717
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
PNPGGGGETCAET IN+FF KI KLAAVRIN M+ERLQLSQQIRE+VYCLFQ+IL+QRTS
Sbjct: 718 PNPGGGGETCAETAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTS 777
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
LFFNRHIDQIILC FYGVAKISQLNLTF+EII NYRKQPQCKPQVFRSVFVDW AR +
Sbjct: 778 LFFNRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNV 837
Query: 849 RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVF 908
R+ DHVDIITFYN++F+P+VKPLLVEL PAG SE N +NDG P SPK S F
Sbjct: 838 RTGADHVDIITFYNEMFIPSVKPLLVELAPAGNN------SEKNDHNDGQGPASPKPSPF 891
Query: 909 PALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
P LPDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQSPSKDL IN
Sbjct: 892 PKLPDMSPKKVSAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVIN 951
Query: 969 HRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPD 1023
+RLN NR++RG LNF DVD GLVSDS+VANSLYLQNG+ S A +K EQP+
Sbjct: 952 NRLNGNRKLRGALNF---DVDAGLVSDSIVANSLYLQNGN-CRSPVAHVKTEQPE 1002
>gi|387166316|gb|AFJ64570.1| retinoblastoma-related protein 2 [Brassica rapa]
Length = 1019
Score = 1476 bits (3822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 733/1031 (71%), Positives = 831/1031 (80%), Gaps = 41/1031 (3%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L DLC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEATLLDLCEKVLSLEGSVCDEALKLFTETKRILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAF+LY V+ L+ + Q S DN FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFILYSVKMLTVRKQVGGQSVSGDNGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP+L +YGADWENRL+AKELQANFVHLS+LSK YKR YREFFL DAN
Sbjct: 116 FKELPQFVVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVS+LAILIIHVP R
Sbjct: 176 AEKTSA--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSVLAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DSSRFVKK +K VDL+ASLC IYD SED+LRKIM K N LI ILKKKP AS
Sbjct: 234 FRNFNIQDSSRFVKKGDKDVDLVASLCKIYDASEDELRKIMNKANCLIETILKKKPSPAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CKS+ L+NI+ DGL YFE+L+D+SS+S+SL LEKDYD+ NKGELDERVFINE+DSL
Sbjct: 294 GCKSDTLDNINPDGLTYFEDLLDESSISTSLTTLEKDYDDTVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN+TGAKRK DSL+SP +T SPLSPH+S A A S + TPV
Sbjct: 354 LGSGSLSAGAVNLTGAKRKIDSLSSPARTFISPLSPHKSPA---------AKSTVTATPV 404
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPLP KPS LE FLKSCD+D+T DV RRAH+ILEAIFP+S LG++
Sbjct: 405 STAMTTAKWLRTVICPLPPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGDQ 464
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWA+QRRLEA+KLYYRVLEAMC AEAQ+LH NL SLLTNERFHRC
Sbjct: 465 CAGGSLQPVNLMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHRC 524
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 525 MLACSAELVLATHKSITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 584
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWE+GSSMYNSL VA+ L EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 585 ERLLESMVWERGSSMYNSLIVAKAPLGLEINRLGLLAEPMPSLDAIAALINFSEGSSNHA 644
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ K E PGQNGDI+SPKR CTDYRS+LVER++F SPVK+RLL L N+KSK LPPPLQ
Sbjct: 645 SSVQKAEACPGQNGDIKSPKRLCTDYRSILVERSSFASPVKERLLALGNVKSKTLPPPLQ 704
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFA+PTRPNPGGGGETCAETGINIF KINKLAAVRIN MVERLQLSQQ RESVYCLFQ
Sbjct: 705 SAFATPTRPNPGGGGETCAETGINIFLTKINKLAAVRINGMVERLQLSQQTRESVYCLFQ 764
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
++L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSVFVD
Sbjct: 765 RVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFVD 824
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
+ R+ GR DHVDIITFYN +F+PAVKPLLVE+ P +K + E N+N +G CP
Sbjct: 825 SSQGRRQGRVGPDHVDIITFYNDVFIPAVKPLLVEIVP----VKKGQAVEANNNPEGHCP 880
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQSP
Sbjct: 881 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSP 940
Query: 961 SKDLTDI--NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYL-------------- 1004
SKDL+ I N++ + TL F DV+ GLVSDSMV NSLY
Sbjct: 941 SKDLSAINNRLNNNNSSNRKRTLKF---DVEAGLVSDSMVGNSLYQQNQNQNQNETDASN 997
Query: 1005 --QNGSAAAST 1013
QNGS A+S+
Sbjct: 998 QNQNGSDASSS 1008
>gi|380710179|gb|AFD98848.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
Length = 1018
Score = 1476 bits (3820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/1015 (73%), Positives = 851/1015 (83%), Gaps = 8/1015 (0%)
Query: 12 NNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEE 71
+NSE N G D+ E R TD CKNGLS+ E+ E KLF ++KHLLL+N +AIG PEE
Sbjct: 10 SNSEEN-GSVDSLEVRFTDFCKNGLSMGESFMVEARKLFMDSKHLLLSNNAAIGAITPEE 68
Query: 72 AERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
ER+WF FVL+ V+RLSE N G+ N F+LC ILR KLN++DFFKELPQF+VK
Sbjct: 69 VERYWFVFVLFSVKRLSENEARNSSNGNEGNGFDLCQILRGAKLNVLDFFKELPQFIVKV 128
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTS 191
GP+LSN+YG+DWE RL+AKELQ NFVHLS+LSK YKR Y+E FL SD N QSA +++
Sbjct: 129 GPVLSNLYGSDWEKRLQAKELQTNFVHLSLLSKYYKRAYQELFLSSDNNEVNQSATSNSI 188
Query: 192 GYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSR 251
+ Y+RFGWLLFL+LR H FSRFKDLVTCTNGLVS+LAILIIHVPV FRNFNI+DS R
Sbjct: 189 VLLPQYYRFGWLLFLSLREHVFSRFKDLVTCTNGLVSVLAILIIHVPVCFRNFNINDSPR 248
Query: 252 FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENID 311
FVKK +K VDL+ SL SIY TS DDLR+ M+K N LI LKK+ C ASEC+++NL+NID
Sbjct: 249 FVKKGDK-VDLLVSLSSIYQTSIDDLRETMDKVNNLITVKLKKELCLASECRAKNLDNID 307
Query: 312 TDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAV 371
DGL YFENL+++SSLSSS+ ILEKDY++A +NKGELDER+F+N++DSLLGSGSLSGGAV
Sbjct: 308 ADGLTYFENLLEESSLSSSICILEKDYNDAIQNKGELDERIFVNDEDSLLGSGSLSGGAV 367
Query: 372 NITGAKRKFDSLASPVKTITSPLSPHRS-SASHPNGIAGGATSKMVVTPVSTAMTTAKWL 430
N+ G K+KFD++ASP KTITSPLSP+RS AS+ N SKM TPV+TAMTTA+WL
Sbjct: 368 NMNGIKKKFDAMASPTKTITSPLSPYRSPGASNVNSNLNCGNSKMAATPVTTAMTTARWL 427
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGAN 490
RTVI PL +KPS ELERFL +CD++V+ DV+RRAHIILEAIFPSSG GE C GSLQ +
Sbjct: 428 RTVIAPLQAKPSPELERFLSACDRNVSADVIRRAHIILEAIFPSSGPGEHCAAGSLQSTS 487
Query: 491 LMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVL 550
LMDNIWAEQRR E+LKLYYRVL+ MC AE+Q+LH NLTSLLTNERFHRCMLACSAELVL
Sbjct: 488 LMDNIWAEQRRSESLKLYYRVLQTMCVAESQILHVTNLTSLLTNERFHRCMLACSAELVL 547
Query: 551 ATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWE 610
ATHKTVTMLFPAVLERTGIT+FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWE
Sbjct: 548 ATHKTVTMLFPAVLERTGITSFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWE 607
Query: 611 KGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSP 670
KGSSMYNSLTVA+P LSAEINRLGLLA+PMPSLDAIA HIN S G L PV L K + +P
Sbjct: 608 KGSSMYNSLTVAKPSLSAEINRLGLLAEPMPSLDAIAMHINPSLGNLPPVPPLQKSDLAP 667
Query: 671 -GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRP 729
G DIRSPKR CT+YRSVLVERN+FTSPVKDR L L N+KSK PPPLQSAFASPTRP
Sbjct: 668 NGHICDIRSPKRLCTEYRSVLVERNSFTSPVKDRFLALTNIKSK-FPPPLQSAFASPTRP 726
Query: 730 NPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSL 789
NPGGGGETCAET IN+FF KI KLAAVRIN M+ERLQLSQQIRE+VYCLFQ+IL+QRTSL
Sbjct: 727 NPGGGGETCAETSINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSL 786
Query: 790 FFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGR 849
FF+RHIDQIILC FYGVAKISQLNLTF+EIIYNYRKQPQCKPQVFRSVFVDW SAR +G+
Sbjct: 787 FFSRHIDQIILCSFYGVAKISQLNLTFKEIIYNYRKQPQCKPQVFRSVFVDWTSARHNGK 846
Query: 850 SEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFP 909
+ +HVDIITFYN++F+P+VKPLLVEL PAG K N V + DG P SP+ S FP
Sbjct: 847 TGSEHVDIITFYNEMFIPSVKPLLVELAPAGNEQKNNHVEKT--KKDGQGPASPRSSSFP 904
Query: 910 ALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINH 969
+LPDMSPKKVSA HNVYVSPLR+SKMDALISHSSKSYYACVGESTHAYQSPSKDLT IN+
Sbjct: 905 SLPDMSPKKVSAVHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTVINN 964
Query: 970 RLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPDP 1024
RLN NR++RG LNFDDVD VGLVSDS+VAN+LYLQNG+ +S A +K EQP+P
Sbjct: 965 RLNGNRKLRGALNFDDVDA-VGLVSDSIVANTLYLQNGNCISSPRAAVKTEQPEP 1018
>gi|15810509|gb|AAL07142.1| putative retinoblastoma-related protein [Arabidopsis thaliana]
Length = 1013
Score = 1474 bits (3817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/1002 (73%), Positives = 832/1002 (83%), Gaps = 21/1002 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT E N +EA L D+C+ LS+D +T E +KLF ETK +L A+
Sbjct: 1 MEEVQPPVTPP--IEPNG---KRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSAS 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+S IG+G EE ERFWFAF+LY V+RLS + + S DNEFNLC ILR +KLNIVDF
Sbjct: 56 MSNIGSGTREEVERFWFAFILYSVKRLSVRKEADGLSVSGDNEFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+G +L +YGADWENRL+AKE+QANFVHLS+LSK YKR +REFFL DAN
Sbjct: 116 FKELPQFVVKAGSVLGELYGADWENRLQAKEVQANFVHLSLLSKYYKRGFREFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +ST Y+ D +RFGWLLFLALR HAFSRFKDLVTC+NG+VSILAILIIHVP R
Sbjct: 176 AEKNSANSST--YLLDSYRFGWLLFLALRNHAFSRFKDLVTCSNGVVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +KGVDL+ASLC IYD SED+LR +++K N L+ ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVKKGDKGVDLVASLCKIYDASEDELRIVIDKANNLVETILKKKPSPAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC+++ L+NID DGL YFE+L++++S+S+SL LEKDY + KGELDERVFINE+DSL
Sbjct: 294 ECQTDKLDNIDPDGLTYFEDLLEETSISTSLITLEKDYYDG---KGELDERVFINEEDSL 350
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVNITG KRK D+L+SP +T SPLSPH+S A+ NGI+G +K+ TPV
Sbjct: 351 LGSGSLSAGAVNITGVKRKIDALSSPARTFISPLSPHKSPAAKTNGISGA--TKLAATPV 408
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVI PL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +
Sbjct: 409 STAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQ 468
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ +LMD+IWAEQRRLEA KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 469 CGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRC 528
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 529 MLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLE 588
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP L+ EIN+LGLLA+P+PSLDAIA INFS G +
Sbjct: 589 ERLLESMVWEKGSSMYNSLIVARPSLALEINQLGLLAEPIPSLDAIAALINFSDGA-NHA 647
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNG IRSPKR CTDYRS+LVERN+FTSPVKDRLL L N+KSK LPPPLQ
Sbjct: 648 SSVQKHETCPGQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQ 707
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYC FQ
Sbjct: 708 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCFFQ 767
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL F+RHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 768 HVLAQRTSLLFSRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 827
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
R+ GR DHVDIITFYN+IF+PAVKPLLVELGP ++ +R E N+ +G CP
Sbjct: 828 ALQCRRQGRIGPDHVDIITFYNEIFIPAVKPLLVELGP----VRNDRAVEANNKPEGQCP 883
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
GSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHS+KSYYACVGESTHAYQSP
Sbjct: 884 GSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSTKSYYACVGESTHAYQSP 943
Query: 961 SKDLTDI-NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SKDL+ I N NS+ + TLNF D + G+VSDSMVANS
Sbjct: 944 SKDLSAINNRLNNSSSNRKRTLNF---DAEAGMVSDSMVANS 982
>gi|387166330|gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa]
Length = 992
Score = 1464 bits (3790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/974 (73%), Positives = 817/974 (83%), Gaps = 16/974 (1%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L +LC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEAVLLELCEKVLSLEGSICDEALKLFTETKPILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAFVLY V+ L+ + + Q S DN+FNLC ILR +K+NIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFVLYSVKMLTVRKQVDGQSVSGDNKFNLCQILRALKINIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF VK+GP+L +YGADWENRL+AKELQANFVHLS+LSK YKR Y+EFFL DAN
Sbjct: 116 FKELPQFAVKAGPVLCELYGADWENRLQAKELQANFVHLSLLSKYYKRGYQEFFLTYDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K SA +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVSILAILIIHVP R
Sbjct: 176 AEKTSA--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSILAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DSSRFVKK +K VDL+ASLC IYD SED+LRKIM++ N LI ILKKKP AS
Sbjct: 234 FRNFSIQDSSRFVKKGDKEVDLVASLCKIYDASEDELRKIMDQANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK + L+NI+ DGL YFE+L+D++S+S+SL LEKDY+++ NKGELDERVFINE+DSL
Sbjct: 294 TCKIDKLDNINPDGLTYFEDLLDETSISTSLITLEKDYEDSVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGSGSLS GAVN+TG KRK DSL+SP +T SPLSPH+S A+ N I+G K+ TPV
Sbjct: 354 LGSGSLSAGAVNVTGVKRKIDSLSSPARTFISPLSPHKSPAAKTNTISGAI--KLTATPV 411
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTVICPL KPS LE FLKSCD+D+TTDV RRAH+ILEAIFP+S LG+R
Sbjct: 412 STAMTTAKWLRTVICPLLPKPSPGLEHFLKSCDRDITTDVTRRAHVILEAIFPNSSLGDR 471
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
C GSLQ NLMD+IWAEQRRLEA+KLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRC
Sbjct: 472 CAGGSLQPVNLMDDIWAEQRRLEAVKLYYRVLEAMCIAEAQILHANNLNSLLTNERFHRC 531
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHK++TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRHLNSLE
Sbjct: 532 MLACSAELVLATHKSITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLE 591
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSL VARP+L+ EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 592 ERLLESMVWEKGSSMYNSLIVARPLLALEINRLGLLAEPMPSLDAIAALINFSEGS-NHA 650
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
S+ KHET PGQNGD++SPKR CTDYRS+LVERN+FTSPVKDRLL N+KSK LPPPLQ
Sbjct: 651 PSIQKHETCPGQNGDMKSPKRQCTDYRSILVERNSFTSPVKDRLLAFGNVKSKMLPPPLQ 710
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVY LFQ
Sbjct: 711 SAFASPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYRLFQ 770
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSV+VD
Sbjct: 771 HVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVYVD 830
Query: 841 WASARQ--SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
+R+ GR DHVDIITFYN+IF+PAVKPLLVE+ P +K ++ E N+ +G
Sbjct: 831 SHQSRRQGQGRVGPDHVDIITFYNEIFIPAVKPLLVEIIP----VKKDQAMEANNKPEGH 886
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
CPGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQ
Sbjct: 887 CPGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQ 946
Query: 959 SPSKDLTDINHRLN 972
SPSKDL+ IN+RLN
Sbjct: 947 SPSKDLSAINNRLN 960
>gi|387166326|gb|AFJ64575.1| retinoblastoma-related protein 3 [Brassica juncea]
Length = 1021
Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 726/1015 (71%), Positives = 830/1015 (81%), Gaps = 21/1015 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M++ +P VT + + +EA L DLC+ LS++ + E +KLF ETK +L AN
Sbjct: 1 MEEVQPPVTPPIDP-----NGKRSEATLLDLCEKVLSLEGSVCDEALKLFSETKRILSAN 55
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
++ IG+G EE ERFWFAF+LY V+ L+ + + Q S D+ FNLC ILR +KLNIVDF
Sbjct: 56 MANIGSGTREEVERFWFAFILYSVKMLTVRKQVDGQSVSGDSGFNLCQILRALKLNIVDF 115
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GP+L +YGADWE RL+AKELQANFVHLS+LSK YKR YREFFL SDAN
Sbjct: 116 FKELPQFVVKAGPVLCELYGADWEIRLQAKELQANFVHLSLLSKYYKRGYREFFLTSDAN 175
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+K S +++ Y+ D +RFGWLLFLALR HAFSRFKDLVTCTNGLVS+LAILIIHVP R
Sbjct: 176 AEKTSE--NSASYLPDSYRFGWLLFLALRNHAFSRFKDLVTCTNGLVSVLAILIIHVPCR 233
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNFNI DSSRFVKK +K VDL+ASLC IYD SED+LRKIM+K N LI ILKKKP AS
Sbjct: 234 FRNFNIQDSSRFVKKGDKDVDLVASLCKIYDASEDELRKIMDKANNLIETILKKKPSSAS 293
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
CK++ L+NI D L YFE+L+D++S+S+SL LEKDY++ NKGELDERVFINE+DSL
Sbjct: 294 ACKTDKLDNISPDVLTYFEDLLDEASISTSLTTLEKDYNDTVCNKGELDERVFINEEDSL 353
Query: 361 LGSGSLSGGAVNIT-GAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
LGSGSLS GAVNIT G KRK DSL+SP +T SPLSPH+S A+ +GG +K+ TP
Sbjct: 354 LGSGSLSAGAVNITTGVKRKIDSLSSPARTFISPLSPHKSPAAKTTITSGG--NKLTATP 411
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLRTVICPL KPS LE FLKSCD+D+T DV RRAH+ILEAIFP+S LG+
Sbjct: 412 VSTAMTTAKWLRTVICPLLPKPSPGLELFLKSCDRDITNDVTRRAHVILEAIFPNSSLGD 471
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
+C GSLQ NLMD+IWA+QRRLEA+KLYYRVLEAMC AEAQ+LH NL SLLTNERFHR
Sbjct: 472 QCAGGSLQPVNLMDDIWAQQRRLEAVKLYYRVLEAMCKAEAQILHVNNLNSLLTNERFHR 531
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHK++TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRHLNSL
Sbjct: 532 CMLACSAELVLATHKSITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSL 591
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESMVWEKGSSMYNSL VA+P L+ EINRLGLLA+PMPSLDAIA INFS G +
Sbjct: 592 EERLLESMVWEKGSSMYNSLIVAKPSLALEINRLGLLAEPMPSLDAIAALINFSEGSSNH 651
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
S+ K E GQNGDI+S KR CTDYRS+LVER++F SPVKDRLL L N+KSK LPPPL
Sbjct: 652 ASSIQKPEA--GQNGDIKSLKRLCTDYRSILVERSSFASPVKDRLLALGNVKSKTLPPPL 709
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFA+PTRPNPGGGGETCAETGINIFF KINKLAAVRIN MVERLQLSQQIRESVYCLF
Sbjct: 710 QSAFATPTRPNPGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLF 769
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
Q++L QRTSL FNRHIDQIILCCFYGVAKISQ++LTFREIIYNYRKQPQCKP VFRSVFV
Sbjct: 770 QRVLAQRTSLLFNRHIDQIILCCFYGVAKISQMSLTFREIIYNYRKQPQCKPLVFRSVFV 829
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
D + R+ GR DHVDIITFYN +F+PAVKPLLVE+ P +K ++ E N N +G C
Sbjct: 830 DSSHCRRQGRVGPDHVDIITFYNDVFIPAVKPLLVEIVP----VKKDQAVEANKNPEGTC 885
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
PGSPKVSVFP++PDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQS
Sbjct: 886 PGSPKVSVFPSVPDMSPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQS 945
Query: 960 PSKDLTDI--NHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
PSKDL+ I N++ + TL F DV+ GLVSD MV NSLY+ N + AS
Sbjct: 946 PSKDLSAINNRLNNNNSSNRKRTLKF---DVEAGLVSDPMVGNSLYVPNQNQDAS 997
>gi|254789785|sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
gi|167593883|gb|ABZ85628.1| retinoblastoma-related protein [Hieracium piloselloides]
Length = 1005
Score = 1455 bits (3766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 722/1017 (70%), Positives = 843/1017 (82%), Gaps = 24/1017 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+D +P + + +S + G EAR + CK L++D+N +E +KLF ++KHL + N
Sbjct: 1 MEDLQP-INPNTDSPTETGAT-TIEARFSYFCKGRLTMDDNALEEAMKLFNQSKHLFMTN 58
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
SA+G+G PEEAE +WFAF+L+ ++RLS+KN SN+N F L ILRV KLN VDF
Sbjct: 59 ASALGSGTPEEAEHYWFAFILFSMKRLSKKNDAEDAAKSNENSFKLYQILRVAKLNFVDF 118
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GPILSN+YG+DWE RL+AKELQANFVHLS+LSK YKR ++ F PS N
Sbjct: 119 FKELPQFIVKTGPILSNLYGSDWETRLQAKELQANFVHLSLLSKYYKRAFKTLFKPSHDN 178
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+ QSA A+++ YIS+ HRFGWLLFLALR+HAFSRFKDLVTCTNGLVSILAILIIH+P R
Sbjct: 179 VEGQSAVANSADYISNCHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILIIHIPAR 238
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF++ DSS FVKK +K VDL+ASLC++Y+TSED+LRK M +TN ++ +ILKK P AS
Sbjct: 239 FRNFSMSDSSHFVKKDDKVVDLLASLCNMYETSEDELRKTMVRTNIVVEEILKKDPSMAS 298
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC + NL+NIDTD L YF++L+++ SLSS L+ILEKDYD+A +GELDER+FIN+++SL
Sbjct: 299 ECTNGNLDNIDTDDLTYFQDLLEEQSLSSDLDILEKDYDDAMLLEGELDERLFINDEESL 358
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGS SLSGGA+N+TG KRK DS+ SP KTITSPLSP++S SKM+ TPV
Sbjct: 359 LGSSSLSGGAINMTGTKRKIDSMTSPTKTITSPLSPYKSP------------SKMISTPV 406
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTV+ PL S PS +L RFL+SCDKDVT+DV++RA IILEAIFPSSG+ +R
Sbjct: 407 STAMTTAKWLRTVVSPLSSFPSVDLTRFLQSCDKDVTSDVIKRARIILEAIFPSSGIPDR 466
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
V + Q NLMDNIWAEQRRLEALKLYYRVL AMC AE+Q+LH NLTSLLTNERFHRC
Sbjct: 467 TVLSNTQTTNLMDNIWAEQRRLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRC 526
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE
Sbjct: 527 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 586
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSLT+ARP LS EINRLGLLA PMPSLDAIA N S GGL PV
Sbjct: 587 ERLLESMVWEKGSSMYNSLTIARPNLSNEINRLGLLAGPMPSLDAIALQCNMSCGGLPPV 646
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
K +TSPG++G+IRSPKR C +YRSVLVERN+FTSPVKDRLLG+ NLKSK L P LQ
Sbjct: 647 ---PKRDTSPGKSGEIRSPKRVCNEYRSVLVERNSFTSPVKDRLLGIGNLKSKILSPALQ 703
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRP+P GETCAET +N+FF KI KLAAVRIN MVER+QL+QQIRE VYCLFQ
Sbjct: 704 SAFASPTRPHP-TRGETCAETAVNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLFQ 762
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
QIL QRTSLFFNRHIDQIILCCFYGVAKI+QL+LTF+EII+NYRKQP CKPQVFR+VFVD
Sbjct: 763 QILGQRTSLFFNRHIDQIILCCFYGVAKITQLSLTFKEIIFNYRKQPHCKPQVFRAVFVD 822
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMK-TNRVSEVNHNNDG-- 897
S+ + G++ QDHVDII FYN+IF+P+VKPLLVEL P+ N+VSE N ++
Sbjct: 823 DRSSSRRGKTGQDHVDIIMFYNEIFIPSVKPLLVELAPSNVPKNPNNQVSETNKKDESGP 882
Query: 898 -PCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
PCPGSPKVS FP+LPDMSPKKVSA HNVYVSPLR++KMDALISH SKSYYACVGESTHA
Sbjct: 883 CPCPGSPKVSSFPSLPDMSPKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHA 942
Query: 957 YQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAST 1013
YQSPSKDLT IN+RLN R+VRG+LNFD +VDVGLVSDS+V+ SLYLQNG AS+
Sbjct: 943 YQSPSKDLTAINNRLNGTRKVRGSLNFD--EVDVGLVSDSLVSQSLYLQNGKGPASS 997
>gi|254789786|sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
gi|167593891|gb|ABZ85632.1| retinoblastoma-related protein [Hieracium pilosella]
Length = 1008
Score = 1444 bits (3739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/1011 (70%), Positives = 839/1011 (82%), Gaps = 24/1011 (2%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+D +P + + +S + G EAR +D CK L++D+N +E +KLF ++KHL + N
Sbjct: 1 MEDLQP-INPNTDSPTETGAT-TIEARFSDFCKGRLTMDDNALEEAMKLFNQSKHLFMTN 58
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
SA+G+G PEEAE +WFAF+L+ ++RLS+KN S++N F L ILRV KLN VDF
Sbjct: 59 ASALGSGTPEEAEHYWFAFILFSMKRLSKKNDGEDAAKSSENSFKLYQILRVAKLNFVDF 118
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKELPQF+VK+GPILSN+YG+DWE RL+AKELQANFVHLS+LSK YKR ++ F + N
Sbjct: 119 FKELPQFIVKTGPILSNLYGSDWETRLQAKELQANFVHLSLLSKFYKRAFKTLFKATHEN 178
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+ QSA A+++ YIS+ HRFGW+LFLALR+HAFSRFKDLVTCTNGLVSILAILIIH+P R
Sbjct: 179 VEGQSAVANSADYISNCHRFGWMLFLALRVHAFSRFKDLVTCTNGLVSILAILIIHIPAR 238
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF++ DSSRFVKK +K VDL+ASLC++Y+TSED+LRK + +TN ++ +ILKK P AS
Sbjct: 239 FRNFSMSDSSRFVKKDDKVVDLLASLCNMYETSEDELRKTVVRTNIVVEEILKKDPSMAS 298
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
EC + NL+NIDTD L YF++L+++ SLSS L++LEKDYD+A +GELDER+FIN+++SL
Sbjct: 299 ECTNGNLDNIDTDDLTYFQDLLEEQSLSSDLDVLEKDYDDAMLLEGELDERLFINDEESL 358
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
LGS SLSGGA+N+TG KRK DS+ SP KTITSPLSP++S SKM+ TPV
Sbjct: 359 LGSSSLSGGAINMTGTKRKVDSMTSPTKTITSPLSPYKSP------------SKMISTPV 406
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLRTV+ PL S PS +L RFL+SCDKDVT+DV++RA IILEAIFPSSG+ +R
Sbjct: 407 STAMTTAKWLRTVVSPLSSFPSVDLTRFLQSCDKDVTSDVIKRARIILEAIFPSSGIPDR 466
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
+ + Q NLMDNIWAEQRRLEALKLYYRVL AMC AE+Q+LH NLTSLLTNERFHRC
Sbjct: 467 TIISNTQTTNLMDNIWAEQRRLEALKLYYRVLHAMCKAESQILHGNNLTSLLTNERFHRC 526
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEE LPRELRRHLNSLE
Sbjct: 527 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEEPLPRELRRHLNSLE 586
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESMVWEKGSSMYNSLT+ARP LS EINRLGLLADPMPSLDAIA N S GGL PV
Sbjct: 587 ERLLESMVWEKGSSMYNSLTIARPNLSNEINRLGLLADPMPSLDAIALQCNMSCGGLPPV 646
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
K +TSPG++G+IRSPKR C +YRSVLVERN+FTSPVKDRLLG+NNLKSK L P LQ
Sbjct: 647 ---PKRDTSPGKSGEIRSPKRVCNEYRSVLVERNSFTSPVKDRLLGINNLKSKILSPALQ 703
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRP+P GETC ET +N+FF KI KLAAVRIN MVER+QL+QQIRE VYCLFQ
Sbjct: 704 SAFASPTRPHP-TRGETCGETAVNLFFSKIVKLAAVRINGMVERMQLTQQIRERVYCLFQ 762
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
QIL QRTSLFFNRHIDQIILCCFYGVAKISQL+LTF+EII+NYRKQP CKPQVFR+VFVD
Sbjct: 763 QILGQRTSLFFNRHIDQIILCCFYGVAKISQLSLTFKEIIFNYRKQPHCKPQVFRAVFVD 822
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMK-TNRVSEVNHNNDG-- 897
S+ + ++ QDHVDII FYN++F+P+VKPLLVEL P+ N+VS+ N ++
Sbjct: 823 DRSSSRRSKTGQDHVDIIMFYNEVFIPSVKPLLVELAPSNVPKNPNNQVSDSNKKDESGP 882
Query: 898 -PCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
PCPGSPKVS FP+LPDMSPKKVSA HNVYVSPLR++KMDALISH SKSYYACVGESTHA
Sbjct: 883 CPCPGSPKVSSFPSLPDMSPKKVSAVHNVYVSPLRSTKMDALISHGSKSYYACVGESTHA 942
Query: 957 YQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNG 1007
YQSPSKDLT IN+RLN R+VRG+LNFD +VDVGLVSDS+V SLYLQNG
Sbjct: 943 YQSPSKDLTAINNRLNGTRKVRGSLNFD--EVDVGLVSDSLVTQSLYLQNG 991
>gi|122233627|sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria baicalensis]
Length = 1006
Score = 1442 bits (3733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/1005 (72%), Positives = 831/1005 (82%), Gaps = 21/1005 (2%)
Query: 22 DATEARLTDLCKNGLSVDENTY-KEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFV 80
+ EAR KN L +D++ + + KL E+KHLL+AN+ A+G G +EAER+WFAFV
Sbjct: 19 NTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANVPALGTGTLDEAERYWFAFV 78
Query: 81 LYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYG 140
LY VR+LSE NG+++++G NLC ILR +LNI DF+KEL QFL+K G ILSN+YG
Sbjct: 79 LYSVRKLSE-NGDSVEKG-----LNLCQILRAARLNIDDFYKELYQFLIKVGSILSNLYG 132
Query: 141 ADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRF 200
DW+ RLEAKE NFVHL LSK YK YRE F +AN DKQ A+ SG SDY+RF
Sbjct: 133 GDWQKRLEAKESHTNFVHLFCLSKKYKNAYRELFSIVNANNDKQLNVANASGCESDYYRF 192
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGV 260
GWLLFLALR+H F K LV+CT+GLVS+LAIL+IHVP FRN N++DS R V + +K
Sbjct: 193 GWLLFLALRVHVFRPCKTLVSCTHGLVSVLAILLIHVPAHFRNLNLNDSERIVMRGDKA- 251
Query: 261 DLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN 320
DL+ASLC++Y TSED+LRK +EK N LI DILKKKPC ASECK NLENI TDGL+YFE
Sbjct: 252 DLVASLCNMYGTSEDELRKTLEKANNLITDILKKKPCLASECKPANLENIVTDGLVYFEG 311
Query: 321 LMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNI--TGAKR 378
LMD+SSLSSS+ +LEKDYD AT + LDE +F+NE+DSLLGSGSLSGGA N G KR
Sbjct: 312 LMDESSLSSSIYLLEKDYDAATHDMDGLDEMIFLNENDSLLGSGSLSGGATNSYGNGTKR 371
Query: 379 KFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLP 438
K D+++SP KTITSPLSPHRS H NG G SKM TPV+TAMTTAKWLRTVI PLP
Sbjct: 372 KLDAMSSPAKTITSPLSPHRSPICHSNGFIVGGISKMASTPVTTAMTTAKWLRTVIAPLP 431
Query: 439 SKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAE 498
SKPSAELE+FL SCD+DVT DV RRA IILEAIFPSSGLG Q A+LMDNIWAE
Sbjct: 432 SKPSAELEKFLTSCDRDVTPDVTRRAQIILEAIFPSSGLG--------QNASLMDNIWAE 483
Query: 499 QRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTM 558
QRR+EA+KLY+RVL+A+CTAE+Q+LHA NLTSLLTNERFHRCMLACSAELVLATHKTVTM
Sbjct: 484 QRRMEAMKLYFRVLQALCTAESQILHANNLTSLLTNERFHRCMLACSAELVLATHKTVTM 543
Query: 559 LFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS 618
LFP VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS
Sbjct: 544 LFPTVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS 603
Query: 619 LTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRS 678
L VARP LSAEI+RLGLLA+PMPSLDAIA H N S G L P+ +L KHE GQNGDIRS
Sbjct: 604 LIVARPALSAEISRLGLLAEPMPSLDAIAMHNNMSCGVLPPMQALLKHEKH-GQNGDIRS 662
Query: 679 PKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETC 738
PKR CT+YRSVLVERN+FTSPVKDRLL LNNLKSK PP L SAFASPTRP+PGGGGETC
Sbjct: 663 PKRVCTEYRSVLVERNSFTSPVKDRLLALNNLKSKFPPPILHSAFASPTRPSPGGGGETC 722
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQI 798
AET +N+FF KI KLAAVRIN MVERLQLSQQIRESVYCLFQ+IL+QRT+LFFNRHIDQI
Sbjct: 723 AETAVNVFFSKIVKLAAVRINGMVERLQLSQQIRESVYCLFQKILSQRTTLFFNRHIDQI 782
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
+LCCFYGV+KISQL LTF+EII+NYRKQPQCKPQVFR+V+VDW + R++G+S DHVDII
Sbjct: 783 LLCCFYGVSKISQLTLTFKEIIFNYRKQPQCKPQVFRNVYVDWKALRRTGKSGPDHVDII 842
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKK 918
TFYN+IFVPAVKPLLVE+ P G+A ++V E +N +G P SP+ S FP+LPDMSPKK
Sbjct: 843 TFYNEIFVPAVKPLLVEIAPGGSAQSGSQVPEAKNNTNGVNPSSPRTSSFPSLPDMSPKK 902
Query: 919 VSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVR 978
VSA HNVYVSPLR+SKMDALISHSS+SYYACVGESTHAYQSPSKDLT IN+RLN NR+VR
Sbjct: 903 VSAAHNVYVSPLRSSKMDALISHSSRSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVR 962
Query: 979 GTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPD 1023
GTLNFD DVDVGLV+DS+VANSLY+QNGS A+S+ V+K EQ D
Sbjct: 963 GTLNFD--DVDVGLVTDSVVANSLYVQNGSCASSSHMVVKSEQQD 1005
>gi|75244686|sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
gi|23429044|gb|AAM77469.1| retinoblastoma-like protein [Cocos nucifera]
Length = 1011
Score = 1415 bits (3664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/1029 (68%), Positives = 840/1029 (81%), Gaps = 32/1029 (3%)
Query: 1 MDDTKPSVTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLAN 60
M+D KPS++ ++ D A EARLTD+CK+ L++DE+T ++ + LFRE+KH+LLAN
Sbjct: 8 MEDVKPSISLPSD------DGGAMEARLTDVCKSKLALDESTMRQAMILFRESKHILLAN 61
Query: 61 ISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
+SAIG+G PEE ERFW AFVLY V RLS+ +Q +N LC ILRV+K+N+VDF
Sbjct: 62 MSAIGSGSPEEIERFWSAFVLYCVTRLSKGRT---KQEKEENGITLCRILRVLKMNVVDF 118
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDAN 180
FKE+PQF +K+G IL+ +YG+DWE RLE KELQAN VHLS+LS+ YKR Y+E FLP+DA+
Sbjct: 119 FKEIPQFCLKAGYILTGLYGSDWEKRLELKELQANIVHLSLLSRYYKRAYQELFLPNDAS 178
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR 240
+ S A ++ GY+SDYH FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI+H+P R
Sbjct: 179 SGRHSVAPNSVGYVSDYHHFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILILHIPAR 238
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEAS 300
FRNF+I DS F K++ KGVDL+ASLC Y TSED+LR++MEK N LI DILKKKPC AS
Sbjct: 239 FRNFHIQDSLLFAKRTAKGVDLVASLCDKYHTSEDELRRVMEKANNLIVDILKKKPCAAS 298
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
ECK ENL I+TDGLIYFE+L++++SL SS+ ILE +YD+A +KGELDER+F+N++DSL
Sbjct: 299 ECKRENLAYINTDGLIYFEDLLEENSLQSSILILEDNYDDAINSKGELDERMFVNDEDSL 358
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMV-VTP 419
LGSGSLSGG++ + KRK+D++ASP K+ITSPLSP S AS NG KMV +TP
Sbjct: 359 LGSGSLSGGSIKM---KRKYDAMASPAKSITSPLSPPLSPASPVNG---NPVIKMVPITP 412
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLR +I PLPS+PS EL F SCD+D+TTDV RRA IIL AIFP++ G+
Sbjct: 413 VSTAMTTAKWLRNIISPLPSRPSTELLCFFSSCDRDITTDVTRRASIILGAIFPTTSFGD 472
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
C++G+LQ N MD+IWAEQR++EA+KLYYRVLE MC AE+ +L+ NLTSLL+N+RFHR
Sbjct: 473 CCISGNLQSVNQMDSIWAEQRKVEAMKLYYRVLETMCRAESHILNGNNLTSLLSNDRFHR 532
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CMLACSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIESF+RHEE+LPREL+RHLNSL
Sbjct: 533 CMLACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEETLPRELKRHLNSL 592
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESM WE+GSSMYNSL VARP L+AEINRLGLLA+PMPSLDAIA H N S+GGL P
Sbjct: 593 EERLLESMAWERGSSMYNSLIVARPTLAAEINRLGLLAEPMPSLDAIAVHNNISTGGLPP 652
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+ KHE S QNG SPKR C++YRSVLVERN+FTSPVK+ L LN LKSK PPL
Sbjct: 653 L-PFQKHEHSSDQNGGAVSPKRACSEYRSVLVERNSFTSPVKELTLTLN-LKSKL--PPL 708
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNP GGGETCAETGINIFF KI KLAA+RI ++ ERLQL QQI E VYCL
Sbjct: 709 QSAFASPTRPNPAGGGETCAETGINIFFNKIVKLAAIRIRSLCERLQLPQQILEWVYCLI 768
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQIL+QRT+LFFNRHIDQIILC FYGVAKISQ+ LTF+EIIYNYRKQPQCKPQVFRSVFV
Sbjct: 769 QQILSQRTALFFNRHIDQIILCSFYGVAKISQMALTFKEIIYNYRKQPQCKPQVFRSVFV 828
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
W S +G++ Q+HVDIITFYN++F+P+VKPLLVELGPAG A K+ E ++N D
Sbjct: 829 HWPSTSHNGKTGQEHVDIITFYNEVFIPSVKPLLVELGPAGVAQKSKSSPEDSNNADSQI 888
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
PGSP++S FP LPDMSPKKVSA HNVYVSPLR+SKMDAL+S SSKSYYACVGESTHAYQS
Sbjct: 889 PGSPRLSPFPNLPDMSPKKVSAAHNVYVSPLRSSKMDALLSPSSKSYYACVGESTHAYQS 948
Query: 960 PSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAA-ASTCAVL- 1017
PSKDLT IN+RLNS R+V G LNFD +VSDS+VA SL QNGS+A A C++L
Sbjct: 949 PSKDLTAINNRLNSGRKVSGRLNFD-------VVSDSVVAGSLGAQNGSSAPAPACSILE 1001
Query: 1018 ---KPEQPD 1023
K EQPD
Sbjct: 1002 LPVKREQPD 1010
>gi|75266674|sp|Q9SXN6.1|RBR1_TOBAC RecName: Full=Retinoblastoma-related protein 1; Short=NtRb1
gi|4586799|dbj|BAA76477.1| NtRb1 [Nicotiana tabacum]
Length = 961
Score = 1388 bits (3593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/1015 (70%), Positives = 810/1015 (79%), Gaps = 65/1015 (6%)
Query: 12 NNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEE 71
+NSE N G D+ E R TD CKNGLS+ E+ E KLF ++KHLLL+N S IG + E
Sbjct: 8 SNSEEN-GCVDSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIG-VITEG 65
Query: 72 AERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
ER+WF FVLY V+RLSEK N G+ N F+LC ILR KLN+VDFFKELPQF++K
Sbjct: 66 VERYWFVFVLYSVKRLSEKEVGNSSNGNEGNAFSLCQILRGAKLNVVDFFKELPQFILKV 125
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTS 191
GP LSN+YG+DWE RLEAKELQ NFVHLS+LSK YKR Y+E FL S N DK SA +S++
Sbjct: 126 GPTLSNLYGSDWEKRLEAKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPSATSSSA 185
Query: 192 GYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSR 251
++ Y+RFGWLLFL+LRIH FSRFKDLVTCTNGLVS+LAILIIHVPVRFRNFNI+DSSR
Sbjct: 186 IHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILIIHVPVRFRNFNINDSSR 245
Query: 252 FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENID 311
FVKK +K VDL+ASL IY TS DDLR+ M+K N LI + LKKKPC ASE ++ENL+N+D
Sbjct: 246 FVKKGDK-VDLLASLGKIYQTSIDDLRETMDKVNYLITEKLKKKPCLASEFRTENLDNLD 304
Query: 312 TDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAV 371
TDGL YFE+LM++S L SS++ILEKDY +A +NKGELDER+F+NE+DSLLGSGSLSGG V
Sbjct: 305 TDGLTYFEDLMEESCLPSSVSILEKDYSDAIQNKGELDERIFVNEEDSLLGSGSLSGGVV 364
Query: 372 NITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV-TPVSTAMTTAKWL 430
N+ G KRKFD++ASP KT+TS LSP+RS PN A SKM V TPVSTAMTTA+WL
Sbjct: 365 NMNGVKRKFDAMASPAKTVTSTLSPYRS----PNC----ANSKMTVATPVSTAMTTARWL 416
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTG-SLQGA 489
RTVI PL KPSAELERFL SCD+DVT DV+RRA IILEAIFPSSG E C G SLQ
Sbjct: 417 RTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQST 476
Query: 490 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELV 549
+LMDNIWAEQR EALKLYYRVL+ MCTAE+Q+L+ NLTSLLTNERFHRCMLACSAELV
Sbjct: 477 SLMDNIWAEQRTSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELV 536
Query: 550 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW
Sbjct: 537 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 596
Query: 610 EKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETS 669
EKGSSMYNSL VA+P L+AEINR GLLA+PMPSLDAIA HIN SSG L P+ SLHK+ +
Sbjct: 597 EKGSSMYNSLAVAKPSLAAEINRTGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLA 656
Query: 670 P-GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTR 728
P GQ GDIRSPK+ C++YRSVLVERN+FTSPVKDR L LNN+KSK PP LQSAFASPTR
Sbjct: 657 PNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALQSAFASPTR 716
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
PNPGGGGETCAET IN+FF KI KLAAVRIN M+ERLQLSQQIRE+VYCLFQ+IL+QRTS
Sbjct: 717 PNPGGGGETCAETAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTS 776
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
LFFNRHIDQIILC FYGVAK
Sbjct: 777 LFFNRHIDQIILCSFYGVAK---------------------------------------- 796
Query: 849 RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVF 908
R+ DHVDIITFYN++F+P+VKPLLVEL PAG A E N++NDG P SPK S F
Sbjct: 797 RTGADHVDIITFYNEMFIPSVKPLLVELAPAGNA-------EKNNHNDGQGPASPKPSPF 849
Query: 909 PALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
P LPDMSPKKVSA HNVYVSPLR SKMDALISHSSKSYYACVGESTHAYQSPSKDL IN
Sbjct: 850 PKLPDMSPKKVSAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVIN 909
Query: 969 HRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPD 1023
+RLN NR++RG LNF DVD GLVSDS+VANSLYLQNG+ S A +K EQP+
Sbjct: 910 NRLNGNRKLRGALNF---DVDAGLVSDSIVANSLYLQNGN-CRSPVAHVKTEQPE 960
>gi|75220294|sp|O82677.1|RBR_CHERU RecName: Full=Retinoblastoma-related protein
gi|3702121|emb|CAA09736.1| retinoblastoma-related protein [Chenopodium rubrum]
Length = 1012
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/1003 (69%), Positives = 819/1003 (81%), Gaps = 22/1003 (2%)
Query: 33 KNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRLSEKNG 92
+N S+D+ Y + +KLF E+K +L N+S IG+ PEE ER+ FAF+LY +RL K
Sbjct: 19 QNQFSLDDKMYSDALKLFTESKSILSNNVSPIGSTTPEELERYMFAFILYASKRLGAKTT 78
Query: 93 ENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKEL 152
+ +GSN + LC L+ +KLN+VDFFKELPQF+VK GPILS++YGADWE RLEAKEL
Sbjct: 79 GDASEGSNQSGITLCQKLKAVKLNLVDFFKELPQFVVKIGPILSDMYGADWEKRLEAKEL 138
Query: 153 QANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHA 212
QANFVHLS+LSK YKR Y+EFF ++ + + S+S ISDY+RFGWLLFLALR+HA
Sbjct: 139 QANFVHLSLLSKYYKRAYQEFFKTNEVDKEVADPGTSSSDSISDYYRFGWLLFLALRVHA 198
Query: 213 FSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDT 272
FSRFKDLVTCTNG+VS+LAILIIH+P R R F+ D F KK ++GV+L+ASLC YDT
Sbjct: 199 FSRFKDLVTCTNGIVSVLAILIIHIPARLRKFSALDLPLFEKKIDRGVNLVASLCQKYDT 258
Query: 273 SEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLN 332
SED+++ +MEK N LI +ILKK PC AS CK+ENLENID D L YFE+L++DSSL + ++
Sbjct: 259 SEDEVKHMMEKANELILEILKKNPCSASLCKTENLENIDPDDLTYFEDLLEDSSLPNCIS 318
Query: 333 ILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKR-KFDSLASPVKTIT 391
+LEKDYD A NKG++DERVF+N DDSLLGSGSLSGGA+NI+G + + + L + +TI
Sbjct: 319 MLEKDYDAAIWNKGDIDERVFVNVDDSLLGSGSLSGGAINISGLREIRCNGLFN--ETIA 376
Query: 392 SPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
SPLSP RS A H NG GG +M+ TPVSTAMTTAKWLRT I PLPSKPS +LE++L S
Sbjct: 377 SPLSPCRSPALHVNGARGGVNIRMISTPVSTAMTTAKWLRTYISPLPSKPSPQLEKYLMS 436
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
CD++++++V+RRAHII+EAIFP+S LGERC+ GSL +NL DNIWA+QRRLEALKLYYRV
Sbjct: 437 CDRNISSEVVRRAHIIMEAIFPNSALGERCIAGSLPNSNLTDNIWAQQRRLEALKLYYRV 496
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 571
LE MCTAEAQ+LHA NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLE+TGITA
Sbjct: 497 LETMCTAEAQLLHANNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLEKTGITA 556
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 631
FDLSKVIESFIRHE+SLPRELRRHLNSLEERLLESM WEKGSSM NSL +ARP LSA IN
Sbjct: 557 FDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMAWEKGSSMDNSLIIARPALSAGIN 616
Query: 632 RLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLV 691
R GLLA+PMP L+A+A HI S+GGL P+ S KHE + GQNGDIRSPKR CT+YRSVLV
Sbjct: 617 RFGLLAEPMPFLNAMAAHIEVSTGGLPPLPSSCKHEFAAGQNGDIRSPKRACTEYRSVLV 676
Query: 692 ERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKIN 751
ERN+FTSPVKDRL +NNLK K PP LQSAFASPTR +PGGGGETCAETGINIFF KI
Sbjct: 677 ERNSFTSPVKDRL--INNLKQKLTPPALQSAFASPTRLSPGGGGETCAETGINIFFSKIV 734
Query: 752 KLAAVRINAMVERL----------QLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
KLAAVRIN M+ERL QL +Q+RE+VYC F ILNQRTSLFFNRHIDQIILC
Sbjct: 735 KLAAVRINGMIERLEKLEKQSQTQQLREQLRENVYCRFHIILNQRTSLFFNRHIDQIILC 794
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
FYGVAKISQ LTF+EII NYRKQPQCKPQVFRSVFVDW+ +R++ R QDHVDIITFY
Sbjct: 795 AFYGVAKISQYELTFKEIILNYRKQPQCKPQVFRSVFVDWSFSRRN-RQGQDHVDIITFY 853
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N++F+P+VKPLL ELGP G +KT+ + E N++ DG CPGSPK+S FP+LPDMSPKKV+
Sbjct: 854 NEVFIPSVKPLLGELGPQGACVKTDLIPESNNDKDGQCPGSPKLSTFPSLPDMSPKKVA- 912
Query: 922 THNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
NVYVSPLR+SKMDALIS+SSKSYYACVGESTHA+QSPSKDLT IN RLNS +VRG L
Sbjct: 913 -KNVYVSPLRSSKMDALISNSSKSYYACVGESTHAFQSPSKDLTAINDRLNSTSKVRGAL 971
Query: 982 NFDDVDVDVGLVSDSMVANSLYLQNGS-AAASTCAVLKPEQPD 1023
NF D D GLVSDS+VANSLYLQNG+ A S+ LK EQPD
Sbjct: 972 NF---DTDAGLVSDSLVANSLYLQNGNCATTSSVGPLKTEQPD 1011
>gi|6984231|gb|AAF34803.1|AF230739_1 retinoblastoma-like protein [Euphorbia esula]
Length = 801
Score = 1316 bits (3405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/804 (79%), Positives = 715/804 (88%), Gaps = 15/804 (1%)
Query: 231 AILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIAD 290
AILIIH+P RFRNFN++D RFVKK +KGVDL+ASLC+ YD SED+L+KI+EKTN LI D
Sbjct: 1 AILIIHIPARFRNFNLNDQ-RFVKKGDKGVDLLASLCNQYDISEDELKKILEKTNNLIVD 59
Query: 291 ILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDE 350
ILKK P ASECK+ENLENID DGL+Y+++LM+++SL SSLNIL++DY+++T KGELDE
Sbjct: 60 ILKKTPRSASECKNENLENIDADGLVYYDDLMEEASLQSSLNILQRDYEDSTSCKGELDE 119
Query: 351 RVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP----------LSPHRSS 400
VFINE+DSLLGSG+LSGGAVN+TG KRKFD ++SP KTI+SP LSP RS
Sbjct: 120 TVFINEEDSLLGSGNLSGGAVNVTGTKRKFDMISSPTKTISSPFSPTKTMSSPLSPFRSP 179
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
AS NGI GG SK+ TPV+TAMTTAKWLRTVI PLPSKPS++LERFL SCD+DVT DV
Sbjct: 180 ASRSNGILGGLYSKIADTPVTTAMTTAKWLRTVISPLPSKPSSQLERFLTSCDRDVTNDV 239
Query: 461 MRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEA 520
RRA IILEAIFPSSGLG+ +TG LQ NLM+NIWAEQRRLEALKL YRVLEAMCTAEA
Sbjct: 240 TRRAQIILEAIFPSSGLGKYSITGGLQNTNLMENIWAEQRRLEALKLSYRVLEAMCTAEA 299
Query: 521 QVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIES 580
QVLHA NLTSLLTNERFHRCML+CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIES
Sbjct: 300 QVLHANNLTSLLTNERFHRCMLSCSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIES 359
Query: 581 FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPM 640
FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP LS+EIN LGLLA+PM
Sbjct: 360 FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSSEINHLGLLAEPM 419
Query: 641 PSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPV 700
PSLDAIA INFSSG L P+ S+ K E+SPG++ DIRSPKRPC DYRSVLVERN+FTSPV
Sbjct: 420 PSLDAIAVRINFSSGSLPPLPSVQKQESSPGKSVDIRSPKRPCPDYRSVLVERNSFTSPV 479
Query: 701 KDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINA 760
KDRLL L+NLKSK +PPPLQSAFASPTRPNPGGGGETCAET I+IFFCKINKLAAVRIN
Sbjct: 480 KDRLLALSNLKSK-IPPPLQSAFASPTRPNPGGGGETCAETAISIFFCKINKLAAVRING 538
Query: 761 MVERLQLS-QQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREI 819
M+ERLQ S IRE+VY LFQQIL+ RTSLFFNRHIDQIILCCFYGVAKIS++NLTFREI
Sbjct: 539 MIERLQQSHHHIRENVYRLFQQILSHRTSLFFNRHIDQIILCCFYGVAKISKVNLTFREI 598
Query: 820 IYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPA 879
I NYRKQPQCKPQVFRSVFVDW+S+RQ+GR+ QDHVDIITFYN+IF+PA KPLLVE+G +
Sbjct: 599 ICNYRKQPQCKPQVFRSVFVDWSSSRQNGRTGQDHVDIITFYNEIFIPAAKPLLVEVGSS 658
Query: 880 GTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALI 939
GT K+ +V EV ++ DG CP SPKVS FP+LPDMSPKKVSA+HNVYVSPLRTSKMDALI
Sbjct: 659 GTITKSTQVPEVINSKDGQCPQSPKVSPFPSLPDMSPKKVSASHNVYVSPLRTSKMDALI 718
Query: 940 SHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVA 999
SHSSKSYYACVGESTHAYQSPSKDLT IN+RLNSNR+VRGTLNFD DVDVGLVSDSMVA
Sbjct: 719 SHSSKSYYACVGESTHAYQSPSKDLTAINNRLNSNRKVRGTLNFD--DVDVGLVSDSMVA 776
Query: 1000 NSLYLQNGSAAASTCAVLKPEQPD 1023
NSLYLQNGS A+S+ A++KPEQPD
Sbjct: 777 NSLYLQNGSCASSSGALIKPEQPD 800
>gi|75243176|sp|Q84QM3.1|RBR1_ORYSJ RecName: Full=Retinoblastoma-related protein 1; Short=OsRBR1
gi|30060387|dbj|BAC75848.1| putative Retinoblastoma protein [Oryza sativa Japonica Group]
gi|215768647|dbj|BAH00876.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768840|dbj|BAH01069.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1010
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/1026 (64%), Positives = 792/1026 (77%), Gaps = 40/1026 (3%)
Query: 8 VTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNG 67
VT + + + +AG A E R DLCK+ L +DE+ ++ ++LF+E+K +LL+++S++G+G
Sbjct: 14 VTGAGSGKVDAGGGAAMEERFADLCKSKLGLDESITRQAMQLFKESKSILLSSMSSLGSG 73
Query: 68 MPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQF 127
PEE ERFW AFVLY V RL + +G D +LC ILR LNIVDFFKE+PQF
Sbjct: 74 SPEEIERFWSAFVLYCVSRLGKAG-----KGKEDGGISLCQILRAFSLNIVDFFKEMPQF 128
Query: 128 LVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAA 187
+K G +L+ +YG+DWE RLE KELQAN VHLS+LS+ YKR Y+E FL +DA + SA
Sbjct: 129 CIKVGSVLAGLYGSDWEKRLELKELQANVVHLSLLSRYYKRAYQELFLLNDAKPPENSAE 188
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIH 247
+ SDY+RFGWLLFL LRI FSRFKDLVT TNGLVS+LA+LI+H+PVR RNFNI
Sbjct: 189 PNAQA--SDYYRFGWLLFLVLRIQTFSRFKDLVTSTNGLVSVLAVLIVHIPVRLRNFNIK 246
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPC-EASECKSEN 306
+SS F KKS+KGV+LIASLC Y TSED+L K +EKTNTLI DILKKKPC ASEC+ +
Sbjct: 247 ESSSFAKKSDKGVNLIASLCEKYHTSEDELSKAIEKTNTLIVDILKKKPCPAASECQQDR 306
Query: 307 LENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSL 366
L ID +GL YF+NL+++ SL SL +LEK+Y+NA KGELDER+F N++DSLLGSGSL
Sbjct: 307 LSFIDPEGLTYFKNLLEEDSLKLSLLMLEKEYENAINTKGELDERMFANDEDSLLGSGSL 366
Query: 367 SGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTPVSTA 423
SGGA+N+ G KRK+D +ASP K+ITSP +SP R AS P G G +SKM +TPVSTA
Sbjct: 367 SGGAINLPGTKRKYDVMASPAKSITSPSPMSPPRFCAS-PTG-NGYCSSKMAPITPVSTA 424
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR+ I PLPSKPS EL RF +CDKDVT D+ RRA IIL AIF SS GER T
Sbjct: 425 MTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICT 484
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
S++ N +D IW EQR++EALKLYYRVLE+MC AE Q+L NLTSLL+NERFHRCM+A
Sbjct: 485 -SVRSTNRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIA 543
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 603
CSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIESF+RHE++LPREL+RHLNSLEERL
Sbjct: 544 CSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERL 603
Query: 604 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSL 663
LESM WEKGSSMYNSL VARP LSAEINRLGLLA+PMPSLDAIA H N S GL P+
Sbjct: 604 LESMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL-PF 662
Query: 664 HKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAF 723
K E SP ++ ++RSPKR CT+ R+VLV+ N+F SPVKD LKSK PPLQSAF
Sbjct: 663 QKQEHSPDKD-EVRSPKRACTERRNVLVDNNSFRSPVKD------TLKSK--LPPLQSAF 713
Query: 724 ASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQIL 783
SPTRPNP GGE CAETGI +F KI KLAA+RI + ERLQLSQQ+ E VY L QQI+
Sbjct: 714 LSPTRPNPAAGGELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLVQQII 773
Query: 784 NQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS 843
Q+T+LFFNRHIDQIILC YGVAKISQL LTF+EII+ YRKQ QCKPQVFRSV+V WAS
Sbjct: 774 IQQTALFFNRHIDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWAS 833
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP 903
++G++ +DHVDIITFYN++F+P VKPLLVELG +GT+ N+ +E DGP P SP
Sbjct: 834 RSRNGKTGEDHVDIITFYNEVFIPTVKPLLVELG-SGTS--PNKKNEEKCAADGPYPESP 890
Query: 904 KVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 963
++S FP LPDMSPKKVSA HNVYVSPLRTSKMD L+S SSKSYYACVGESTHA+QSPSKD
Sbjct: 891 RLSRFPNLPDMSPKKVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKD 950
Query: 964 LTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAV------L 1017
L IN+RLNS ++V G LNFD +VSD +VA SL QN ++AA+T A +
Sbjct: 951 LKVINNRLNSGKKVSGRLNFD-------VVSDLVVARSLSDQNSASAAATTADIATKTPV 1003
Query: 1018 KPEQPD 1023
K EQPD
Sbjct: 1004 KLEQPD 1009
>gi|189039574|sp|A2YXJ7.1|RBR1_ORYSI RecName: Full=Retinoblastoma-related protein 1; Short=OsRBR1
gi|125562360|gb|EAZ07808.1| hypothetical protein OsI_30066 [Oryza sativa Indica Group]
Length = 1010
Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/1026 (64%), Positives = 792/1026 (77%), Gaps = 40/1026 (3%)
Query: 8 VTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNG 67
VT + + + +AG A E R DLCK+ L +DE+ ++ ++LF+E+K +LL+++S++G+G
Sbjct: 14 VTGAGSGKVDAGGGAAMEERFADLCKSKLGLDESITRQAMQLFKESKSILLSSMSSLGSG 73
Query: 68 MPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQF 127
PEE ERFW AFVLY V RL + +G D +LC ILR LNIVDFFKE+PQF
Sbjct: 74 SPEEIERFWSAFVLYCVSRLGKAG-----KGKEDGGISLCQILRAFSLNIVDFFKEMPQF 128
Query: 128 LVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAA 187
+K G +L+ +YG+DWE RLE KELQAN VHLS+LS+ YKR Y+E FL +DA + SA
Sbjct: 129 CIKVGSVLAGLYGSDWEKRLELKELQANVVHLSLLSRYYKRAYQELFLLNDAKPPENSAE 188
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIH 247
+ SDY+RFGWLLFL LRI FSRFKDLVT TNGLVS+LA+LI+H+PVR RNFNI
Sbjct: 189 PNAQA--SDYYRFGWLLFLVLRIQTFSRFKDLVTSTNGLVSVLAVLIVHIPVRLRNFNIK 246
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPC-EASECKSEN 306
+SS F KKS+KGV+LIASLC Y TSED+L K +EKTNTLI DILKKKPC ASEC+ +
Sbjct: 247 ESSSFAKKSDKGVNLIASLCEKYHTSEDELSKAIEKTNTLIVDILKKKPCPAASECQQDR 306
Query: 307 LENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSL 366
L ID +GL YF+NL+++ SL SL +LEK+Y+NA KGELDER+F N++DSLLGSGSL
Sbjct: 307 LSFIDPEGLTYFKNLLEEDSLKLSLLMLEKEYENAINTKGELDERMFANDEDSLLGSGSL 366
Query: 367 SGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTPVSTA 423
SGGA+N+ G KRK+D +ASP K+ITSP +SP R AS P G G +SKM +TPVSTA
Sbjct: 367 SGGAINLPGTKRKYDVMASPAKSITSPSPMSPPRFCAS-PTG-NGYCSSKMAPITPVSTA 424
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR+ I PLPSKPS EL RF +CDKDVT D+ RRA IIL AIF SS GER T
Sbjct: 425 MTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICT 484
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
S++ N +D IW EQR++EALKLYYRVLE+MC AE Q+L NLTSLL+NERFHRCM+A
Sbjct: 485 -SVRSTNRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIA 543
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 603
CSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIESF+RHE++LPREL+RHLNSLEERL
Sbjct: 544 CSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERL 603
Query: 604 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSL 663
LESM WEKGSSMYNSL VARP LSAEINRLGLLA+PMPSLDAIA H N S GL P+
Sbjct: 604 LESMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL-PF 662
Query: 664 HKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAF 723
K E SP ++ ++RSPKR CT+ R+VLV+ N+F SPVKD LKSK PPLQSAF
Sbjct: 663 QKQEHSPDKD-EVRSPKRACTERRNVLVDNNSFRSPVKD------TLKSK--LPPLQSAF 713
Query: 724 ASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQIL 783
SPTRPNP GGE CAETGI +F KI KLAA+RI + ERLQLSQQ+ E VY L QQI+
Sbjct: 714 LSPTRPNPAAGGELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLVQQII 773
Query: 784 NQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS 843
Q+T+LFFNRHIDQIILC YGVAKISQL LTF+EII+ YRKQ QCKPQVFRSV+V WAS
Sbjct: 774 IQQTALFFNRHIDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWAS 833
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP 903
++G++ +DHVDIITFYN++F+P VKPLLVELG +GT+ N+ +E DGP P SP
Sbjct: 834 RSRNGKTGEDHVDIITFYNEVFIPTVKPLLVELG-SGTS--PNKKNEEKCAADGPYPESP 890
Query: 904 KVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 963
++S FP LPDMSPKKVSA HNVYVSPLRTSKMD L+S SSKSYYACVGESTHA+QSPSKD
Sbjct: 891 RLSRFPNLPDMSPKKVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKD 950
Query: 964 LTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAV------L 1017
L IN+RLNS ++V G LNFD +VSD +VA SL QN ++AA+T A +
Sbjct: 951 LKVINNRLNSGKKVSGRLNFD-------VVSDLVVARSLSDQNSASAAATTADITTKTPV 1003
Query: 1018 KPEQPD 1023
K EQPD
Sbjct: 1004 KLEQPD 1009
>gi|62956051|gb|AAY23368.1| retinoblastoma-related protein 1 [Oryza sativa Japonica Group]
Length = 1010
Score = 1247 bits (3226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/1026 (64%), Positives = 791/1026 (77%), Gaps = 40/1026 (3%)
Query: 8 VTASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNG 67
VT + + + +AG A E R DLCK+ L +DE+ ++ ++LF+E+K +LL+++S++G+G
Sbjct: 14 VTGAGSGKVDAGGGAAMEERFADLCKSKLGLDESITRQAMQLFKESKSILLSSMSSLGSG 73
Query: 68 MPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQF 127
PEE ERFW AFVLY V RL + +G D +LC ILR LNIVDFFKE+PQF
Sbjct: 74 SPEEIERFWSAFVLYCVSRLGKAG-----KGKEDGGISLCQILRAFSLNIVDFFKEMPQF 128
Query: 128 LVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAA 187
+K G +L+ +YG+DWE RLE KELQAN VHLS+LS+ YKR Y+E FL +DA + SA
Sbjct: 129 CIKVGSVLAGLYGSDWEKRLELKELQANVVHLSLLSRYYKRAYQELFLLNDAKPPENSAE 188
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIH 247
+ SDY+RFGWLLFL LRI FSRFKDLVT TNGLVS+LA+LI+H+PVR RNFNI
Sbjct: 189 PNAQA--SDYYRFGWLLFLVLRIQTFSRFKDLVTSTNGLVSVLAVLIVHIPVRLRNFNIK 246
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPC-EASECKSEN 306
+SS F KKS+KGV+LIASLC Y TSED+L K +EKTNTLI DILKKKPC ASEC+ +
Sbjct: 247 ESSSFAKKSDKGVNLIASLCEKYHTSEDELSKAIEKTNTLIVDILKKKPCPAASECQQDR 306
Query: 307 LENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSL 366
L ID +GL YF+NL+++ SL SL +LEK+Y+NA KGELDER+F N++DSLLGSGSL
Sbjct: 307 LSFIDPEGLTYFKNLLEEDSLKLSLLMLEKEYENAINTKGELDERMFANDEDSLLGSGSL 366
Query: 367 SGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTPVSTA 423
SGGA+N+ G KRK+D +ASP K+ITSP +SP R AS P G G +SKM +TPVSTA
Sbjct: 367 SGGAINLPGTKRKYDVMASPAKSITSPSPMSPPRFCAS-PTG-NGYCSSKMAPITPVSTA 424
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR+ I PLPSKPS EL RF +CDKDVT D+ RRA IIL AIF SS GER T
Sbjct: 425 MTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICT 484
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
S++ N +D IW EQR++EALKLYYRVLE+MC AE Q+L NLTSLL+NERFHRCM+A
Sbjct: 485 -SVRSTNRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIA 543
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 603
CSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIESF+RHE++LPREL+RHLNSLEERL
Sbjct: 544 CSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERL 603
Query: 604 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSL 663
LESM WEKGSSMYNSL VARP LSAEINRLGLLA+PMPSLDAIA H N S GL P+
Sbjct: 604 LESMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL-PF 662
Query: 664 HKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAF 723
K E SP ++ ++RSPKR CT+ R+VLV+ N+F SPVKD LKSK PPLQSAF
Sbjct: 663 QKQEHSPDKD-EVRSPKRACTERRNVLVDNNSFRSPVKD------TLKSK--LPPLQSAF 713
Query: 724 ASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQIL 783
SPTRPNP GGE CAETGI +F KI KLAA+RI + ERLQLSQQ+ E VY L QQI+
Sbjct: 714 LSPTRPNPAAGGELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLVQQII 773
Query: 784 NQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS 843
Q+T+LFFNRHIDQIILC YGVAKISQL LTF+EII+ YRKQ QCKPQVFRSV+V WAS
Sbjct: 774 IQQTALFFNRHIDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWAS 833
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP 903
++G++ +DHVDIITFYN++F+P VKPLLVEL +GT+ N+ +E DGP P SP
Sbjct: 834 RSRNGKTGEDHVDIITFYNEVFIPTVKPLLVELR-SGTS--PNKKNEEKCAADGPYPESP 890
Query: 904 KVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 963
++S FP LPDMSPKKVSA HNVYVSPLRTSKMD L+S SSKSYYACVGESTHA+QSPSKD
Sbjct: 891 RLSRFPNLPDMSPKKVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKD 950
Query: 964 LTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAV------L 1017
L IN+RLNS ++V G LNFD +VSD +VA SL QN ++AA+T A +
Sbjct: 951 LKVINNRLNSGKKVSGRLNFD-------VVSDLVVARSLSDQNSASAAATTADIATKTPV 1003
Query: 1018 KPEQPD 1023
K EQPD
Sbjct: 1004 KLEQPD 1009
>gi|125571489|gb|EAZ13004.1| hypothetical protein OsJ_02923 [Oryza sativa Japonica Group]
Length = 981
Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 658/1009 (65%), Positives = 783/1009 (77%), Gaps = 40/1009 (3%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
E R DLCK+ L +DE+ ++ ++LF+E+K +LL+++S++G+G PEE ERFW AFVLY V
Sbjct: 2 EERFADLCKSKLGLDESITRQAMQLFKESKSILLSSMSSLGSGSPEEIERFWSAFVLYCV 61
Query: 85 RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
RL + +G D +LC ILR LNIVDFFKE+PQF +K G +L+ +YG+DWE
Sbjct: 62 SRLGKAG-----KGKEDGGISLCQILRAFSLNIVDFFKEMPQFCIKVGSVLAGLYGSDWE 116
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLL 204
RLE KELQAN VHLS+LS+ YKR Y+E FL +DA + SA + SDY+RFGWLL
Sbjct: 117 KRLELKELQANVVHLSLLSRYYKRAYQELFLLNDAKPPENSAEPNAQA--SDYYRFGWLL 174
Query: 205 FLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIA 264
FL LRI FSRFKDLVT TNGLVS+LA+LI+H+PVR RNFNI +SS F KKS+KGV+LIA
Sbjct: 175 FLVLRIQTFSRFKDLVTSTNGLVSVLAVLIVHIPVRLRNFNIKESSSFAKKSDKGVNLIA 234
Query: 265 SLCSIYDTSEDDLRKIMEKTNTLIADILKKKPC-EASECKSENLENIDTDGLIYFENLMD 323
SLC Y TSED+L K +EKTNTLI DILKKKPC ASEC+ + L ID +GL YF+NL++
Sbjct: 235 SLCEKYHTSEDELSKAIEKTNTLIVDILKKKPCPAASECQQDRLSFIDPEGLTYFKNLLE 294
Query: 324 DSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSL 383
+ SL SL +LEK+Y+NA KGELDER+F N++DSLLGSGSLSGGA+N+ G KRK+D +
Sbjct: 295 EDSLKLSLLMLEKEYENAINTKGELDERMFANDEDSLLGSGSLSGGAINLPGTKRKYDVM 354
Query: 384 ASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTPVSTAMTTAKWLRTVICPLPSK 440
ASP K+ITSP +SP R AS P G G +SKM +TPVSTAMTTAKWLR+ I PLPSK
Sbjct: 355 ASPAKSITSPSPMSPPRFCAS-PTG-NGYCSSKMAPITPVSTAMTTAKWLRSTISPLPSK 412
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR 500
PS EL RF +CDKDVT D+ RRA IIL AIF SS GER T S++ N +D IW EQR
Sbjct: 413 PSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICT-SVRSTNRIDAIWTEQR 471
Query: 501 RLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 560
++EALKLYYRVLE+MC AE Q+L NLTSLL+NERFHRCM+ACSAELVLATHKTVTM+F
Sbjct: 472 KMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELVLATHKTVTMMF 531
Query: 561 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
PAVLE+TGITAFDLSKVIESF+RHE++LPREL+RHLNSLEERLLESM WEKGSSMYNSL
Sbjct: 532 PAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAWEKGSSMYNSLI 591
Query: 621 VARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPK 680
VARP LSAEINRLGLLA+PMPSLDAIA H N S GL P+ K E SP ++ ++RSPK
Sbjct: 592 VARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPDKD-EVRSPK 649
Query: 681 RPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE 740
R CT+ R+VLV+ N+F SPVKD LKSK PPLQSAF SPTRPNP GGE CAE
Sbjct: 650 RACTERRNVLVDNNSFRSPVKD------TLKSK--LPPLQSAFLSPTRPNPAAGGELCAE 701
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
TGI +F KI KLAA+RI + ERLQLSQQ+ E VY L QQI+ Q+T+LFFNRHIDQIIL
Sbjct: 702 TGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLVQQIIIQQTALFFNRHIDQIIL 761
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
C YGVAKISQL LTF+EII+ YRKQ QCKPQVFRSV+V WAS ++G++ +DHVDIITF
Sbjct: 762 CSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKTGEDHVDIITF 821
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN++F+P VKPLLVELG +GT+ N+ +E DGP P SP++S FP LPDMSPKKVS
Sbjct: 822 YNEVFIPTVKPLLVELG-SGTS--PNKKNEEKCAADGPYPESPRLSRFPNLPDMSPKKVS 878
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGT 980
A HNVYVSPLRTSKMD L+S SSKSYYACVGESTHA+QSPSKDL IN+RLNS ++V G
Sbjct: 879 AAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNSGKKVSGR 938
Query: 981 LNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAV------LKPEQPD 1023
LNFD +VSD +VA SL QN ++AA+T A +K EQPD
Sbjct: 939 LNFD-------VVSDLVVARSLSDQNSASAAATTADIATKTPVKLEQPD 980
>gi|242079805|ref|XP_002444671.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
gi|241941021|gb|EES14166.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
Length = 1012
Score = 1231 bits (3184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/1024 (63%), Positives = 784/1024 (76%), Gaps = 37/1024 (3%)
Query: 5 KPSVTASNNSESNAGDNDA--TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANIS 62
KPS T+S + ++ + A TE R DLCK+ L +DE+T ++ ++LF+ETK++L +++S
Sbjct: 6 KPSTTSSGSGVTDGPSSAAASTEERFADLCKSKLGLDESTTRQAMQLFKETKNILKSSVS 65
Query: 63 AIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFK 122
++G G PEE ERFW A VLY V RLS K G + + GS +LC ILR KLNIVDFFK
Sbjct: 66 SLGGGSPEEIERFWSACVLYCVSRLS-KAGRSKEDGS----VSLCQILRASKLNIVDFFK 120
Query: 123 ELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGD 182
E+PQF +K +L+ +YG+DWE RLE KELQAN VHLS+LS+ YKR Y+E FL +D
Sbjct: 121 EMPQFCLKVAHVLTGLYGSDWEKRLELKELQANVVHLSLLSRHYKRAYQELFLSNDGKCS 180
Query: 183 KQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFR 242
S+ + SDY+RFGWLLFLALRI FSRFKDLVT TN LVS+LA+LIIHVPVR R
Sbjct: 181 GNSSEL-INQEASDYYRFGWLLFLALRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLR 239
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA-SE 301
NF+I DSS F KKS++GV LIASLC Y TSED+L K +EKTNTLI D+LKKKPC A S
Sbjct: 240 NFDIKDSSYFAKKSDRGVSLIASLCEKYHTSEDELSKALEKTNTLIMDVLKKKPCPATSA 299
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLL 361
C+ +NL ID +GL F++ + SL SSL ILEK+Y+NA KGELDER+F N++DSLL
Sbjct: 300 CQQDNLSFIDPEGLTVFKDFLQGDSLKSSLLILEKEYENAINTKGELDERMFANDEDSLL 359
Query: 362 GSGSLSGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VT 418
GSGSLSGGA+N+ G KRK+D +ASP K+I+SP +SP R S P G + SKM +T
Sbjct: 360 GSGSLSGGAINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLS-PKG-SNFCNSKMAPIT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTAMTTAKWLR+ + PLPSKPS EL RF +CDKD+T D+ RA IIL AIF SS G
Sbjct: 418 PVSTAMTTAKWLRSTVSPLPSKPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFG 477
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
ER T +++ AN MD IW EQR++EALKLYYRVLE+MC AE+Q+L NLTSLL+NERFH
Sbjct: 478 ERICT-NMRSANRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFH 536
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
RCM+ACSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIE F+RHE++LPREL+RHLNS
Sbjct: 537 RCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNS 596
Query: 599 LEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLS 658
LEERLLESM WEKGSSMYNSL VARP LS EINRLGLLA+PMPSLDAIA H N S GGL
Sbjct: 597 LEERLLESMAWEKGSSMYNSLIVARPALSVEINRLGLLAEPMPSLDAIAAHHNISLGGLP 656
Query: 659 PVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPP 718
P+ K + ++ ++RSPKR CT+ R+VLV+ N+F SPVKD +KSK LPPP
Sbjct: 657 PL-PFQKQDRLQDKD-EVRSPKRACTERRNVLVDSNSFRSPVKD------IIKSK-LPPP 707
Query: 719 LQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCL 778
LQSAFASPTRPNP GGETCAETGI +FF KI KLAA+RI ++ ERLQLSQQ+ E VY L
Sbjct: 708 LQSAFASPTRPNPAAGGETCAETGIGVFFSKIAKLAAIRIRSLCERLQLSQQVLERVYSL 767
Query: 779 FQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF 838
QQIL+Q+T LFFNRHIDQIILC YGVAKISQL L+F+EII+ YRKQPQCKPQVFRSV+
Sbjct: 768 VQQILSQQTGLFFNRHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVY 827
Query: 839 VDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
V W ++G++ +DHVDIITFYN++F+PAVKPLLVE+GP + K + E + GP
Sbjct: 828 VHWPPRSRNGKTGEDHVDIITFYNEVFIPAVKPLLVEVGPGASPKK--KEEEKGSADVGP 885
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
P SP+++ FP LPDMSPKKVSATHNVYVSPLR+SKMD L+S SSKSYYACVGEST+A+Q
Sbjct: 886 YPESPRLARFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQ 945
Query: 959 SPSKDLTDINHRLN---SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYL-QNGSAAASTC 1014
SPSKDL IN+RLN S ++V G LNFD +VSD +VA+SL QN AA+
Sbjct: 946 SPSKDLKAINNRLNSVSSGKKVNGRLNFD-------VVSDLVVASSLSSDQNAKPAATEV 998
Query: 1015 AVLK 1018
+K
Sbjct: 999 VPIK 1002
>gi|162461964|ref|NP_001105822.1| retinoblastoma-related protein 3 [Zea mays]
gi|122239408|sp|Q3LXA7.1|RBR3_MAIZE RecName: Full=Retinoblastoma-related protein 3; Short=ZmRBR3
gi|74099767|gb|AAZ99092.1| retinoblastoma-related 3 [Zea mays]
gi|414869737|tpg|DAA48294.1| TPA: retinoblastoma protein 3 [Zea mays]
Length = 1010
Score = 1203 bits (3113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/1028 (62%), Positives = 771/1028 (75%), Gaps = 34/1028 (3%)
Query: 5 KPSVTASNNSESNAGDNDAT-EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
KPS ++ + A A+ E R DLCK L +DE+T ++ ++L +ET ++L +++S+
Sbjct: 6 KPSTSSGSGVTVRASVAAASIEERFADLCKAKLGLDESTTRQAMQLLKETNNILKSSMSS 65
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKE 123
+G G PEE ERFW A VLY V RLS K G + + GS +LC ILR KLNIVDFFKE
Sbjct: 66 LGGGSPEEIERFWSACVLYCVSRLS-KAGRSKEDGS----VSLCQILRASKLNIVDFFKE 120
Query: 124 LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDK 183
+PQF +K IL+ +YG+DWE RLE KELQAN VHLS+LS YKR Y+E FL +D
Sbjct: 121 MPQFCIKVAHILTGLYGSDWEKRLELKELQANVVHLSLLSSYYKRAYQELFLSNDGKSSD 180
Query: 184 QSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
S+ ++ SDY+RFGWLLFL LRI FSRFKDLVT TN LVS+LA+LIIHVPVR RN
Sbjct: 181 NSSESNNQ-EASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLRN 239
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA-SEC 302
F+I DSS F KKS++GV LIASLC + TSED+L K +EKTNTLI DILKKKPC A S C
Sbjct: 240 FDIKDSSYFGKKSDRGVSLIASLCEKHHTSEDELSKALEKTNTLIMDILKKKPCPATSAC 299
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLG 362
+ +NL ID +GL F++L+ SL SL ILEK+Y+NA KGELDER+F N++DSLLG
Sbjct: 300 QQDNLSFIDPEGLTVFKDLLQGDSLKPSLIILEKEYENAINTKGELDERMFANDEDSLLG 359
Query: 363 SGSLSGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTP 419
SGSLSGGA+N+ G KRK+D +ASP K+I+SP +SP R S P G G SKM TP
Sbjct: 360 SGSLSGGAINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLS-PKG-NGFCNSKMAPSTP 417
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLR + PLPS+PS EL RF +CDKD+T D+ RA IIL AIF SS GE
Sbjct: 418 VSTAMTTAKWLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGE 477
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
R T S++ A+ MD IW EQR++EALKLYYRVLE+MC AE+Q+L NLTSLL+NERFHR
Sbjct: 478 RICT-SMRSASRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHR 536
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CM+ACSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIE F+RHE++LPREL+RHLNSL
Sbjct: 537 CMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSL 596
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESM WEKGSSMYNSL VARP LS EI+RLGLLA+PMPSLDAIA H N S GGL P
Sbjct: 597 EERLLESMAWEKGSSMYNSLIVARPALSVEISRLGLLAEPMPSLDAIAAHHNISLGGLPP 656
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+ K E ++ ++RSPKR CT+ R+VLV+ N+ SPVKD + KP PPL
Sbjct: 657 L-PFQKQERLQDKD-EVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPL 706
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNP GGETCAETGI +FF KI+KLAA+RI ++ ERLQL QQ+ E VY L
Sbjct: 707 QSAFASPTRPNPAAGGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV 766
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQIL+Q+T LFFNRHIDQIILC YGVAKISQL L+F+EII+ YRKQPQCKPQVFRSV+V
Sbjct: 767 QQILSQQTGLFFNRHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYV 826
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
W ++G++ +DHVDIITFYN++F+PAVK LLVE+GP +A + E + GP
Sbjct: 827 HWPPRSRNGKTGEDHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKKEEEKGPADVGPF 886
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
P SP+++ FP LPDMSPKKVSATHNVYVSPLR+SKMD L+S SSKSYYACVGEST+A+QS
Sbjct: 887 PESPRLARFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQS 946
Query: 960 PSKDLTDINHRLNS---NRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAV 1016
PSKDL IN+RLNS ++V G LNFD +VSD +VA+SL + A+ A
Sbjct: 947 PSKDLKAINNRLNSVSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAK 999
Query: 1017 LKPEQPDP 1024
P + +P
Sbjct: 1000 TTPVKCEP 1007
>gi|414869735|tpg|DAA48292.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
Length = 1009
Score = 1202 bits (3111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1028 (62%), Positives = 771/1028 (75%), Gaps = 35/1028 (3%)
Query: 5 KPSVTASNNSESNAGDNDAT-EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
KPS ++ + A A+ E R DLCK L +DE+T ++ ++L +ET ++L +++S+
Sbjct: 6 KPSTSSGSGVTVRASVAAASIEERFADLCKAKLGLDESTTRQAMQLLKETNNILKSSMSS 65
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKE 123
+G G PEE ERFW A VLY V RLS K G + + GS +LC ILR KLNIVDFFKE
Sbjct: 66 LGGGSPEEIERFWSACVLYCVSRLS-KAGRSKEDGS----VSLCQILRASKLNIVDFFKE 120
Query: 124 LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDK 183
+PQF +K IL+ +YG+DWE RLE KELQAN VHLS+LS YKR Y+E FL +D
Sbjct: 121 MPQFCIKVAHILTGLYGSDWEKRLELKELQANVVHLSLLSSYYKRAYQELFLSNDGKSSD 180
Query: 184 QSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
S+ ++ SDY+RFGWLLFL LRI FSRFKDLVT TN LVS+LA+LIIHVPVR RN
Sbjct: 181 NSSESNNQ-EASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLRN 239
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA-SEC 302
F+I DSS F KKS++GV LIASLC + TSED+L K +EKTNTLI DILKKKPC A S C
Sbjct: 240 FDIKDSSYFGKKSDRGVSLIASLCEKHHTSEDELSKALEKTNTLIMDILKKKPCPATSAC 299
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLG 362
+ +NL ID +GL F++L+ SL SL ILEK+Y+NA KGELDER+F N++DSLLG
Sbjct: 300 QQDNLSFIDPEGLTVFKDLLQGDSLKPSLIILEKEYENAINTKGELDERMFANDEDSLLG 359
Query: 363 SGSLSGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTP 419
SGSLSGGA+N+ G KRK+D +ASP K+I+SP +SP R S P G G SKM TP
Sbjct: 360 SGSLSGGAINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLS-PKG-NGFCNSKMAPSTP 417
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLR + PLPS+PS EL RF +CDKD+T D+ RA IIL AIF SS GE
Sbjct: 418 VSTAMTTAKWLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGE 477
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
R T S++ A+ MD IW EQR++EALKLYYRVLE+MC AE+Q+L NLTSLL+NERFHR
Sbjct: 478 RICT-SMRSASRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHR 536
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CM+ACSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIE F+RHE++LPREL+RHLNSL
Sbjct: 537 CMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSL 596
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESM WEKGSSMYNSL VARP LS EI+RLGLLA+PMPSLDAIA H N S GGL P
Sbjct: 597 EERLLESMAWEKGSSMYNSLIVARPALSVEISRLGLLAEPMPSLDAIAAHHNISLGGLPP 656
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+ K E ++ ++RSPKR CT+ R+VLV+ N+ SPVKD + KP PPL
Sbjct: 657 L-PFQKQERLQDKD-EVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPL 706
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNP GGETCAETGI +FF KI+KLAA+RI ++ ERLQL QQ+ E VY L
Sbjct: 707 QSAFASPTRPNPAAGGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV 766
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQIL+Q+T LFFNRHIDQIILC YGVAKISQL L+F+EII+ YRKQPQCKPQVFRSV+V
Sbjct: 767 QQILSQQTGLFFNRHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYV 826
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
W ++G++ +DHVDIITFYN++F+PAVK LLVE+GP +A + E DGP
Sbjct: 827 HWPPRSRNGKTGEDHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKK-EEEKGPADGPF 885
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
P SP+++ FP LPDMSPKKVSATHNVYVSPLR+SKMD L+S SSKSYYACVGEST+A+QS
Sbjct: 886 PESPRLARFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQS 945
Query: 960 PSKDLTDINHRLNS---NRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAV 1016
PSKDL IN+RLNS ++V G LNFD +VSD +VA+SL + A+ A
Sbjct: 946 PSKDLKAINNRLNSVSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAK 998
Query: 1017 LKPEQPDP 1024
P + +P
Sbjct: 999 TTPVKCEP 1006
>gi|413925045|gb|AFW64977.1| hypothetical protein ZEAMMB73_003481 [Zea mays]
Length = 1002
Score = 1200 bits (3105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 627/1013 (61%), Positives = 765/1013 (75%), Gaps = 37/1013 (3%)
Query: 5 KPSVTA-SNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
KPS ++ S ++S + + + R DLC++ L +D++ ++ ++LF ETK++ + S
Sbjct: 6 KPSTSSGSGVTDSASAAAASIDERFADLCESKLGLDDSMTRQAMQLFNETKNIKSSMSSL 65
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKE 123
G PEE ERFW A V+Y V RLS+ ++ +LC ILR KLNIVDFFKE
Sbjct: 66 GGG-SPEEVERFWSACVMYCVSRLSKA-----RRSKESGSVSLCQILRASKLNIVDFFKE 119
Query: 124 LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDK 183
+PQF +K IL+ +YG+DWE RLE KELQAN VHLS+LS+ YKR Y+E FLP+D
Sbjct: 120 MPQFCIKVAHILTGLYGSDWEKRLELKELQANVVHLSLLSRHYKRAYQELFLPNDGKCS- 178
Query: 184 QSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
S++ S + +SDY+RFGWLLFL LRI FSRFKDLVT TN LVS+LA+LIIH+PVR RN
Sbjct: 179 DSSSESNNQEVSDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHIPVRLRN 238
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA-SEC 302
F+I DSS F KKS++GV LIASLC Y TSED+L K +EKTNTLI DILKKKP A S C
Sbjct: 239 FDIKDSSYFGKKSDRGVSLIASLCEKYHTSEDELSKALEKTNTLILDILKKKPWTATSAC 298
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLG 362
+ +NL ID +GL F++L+ SL SSL ILEK+Y+NA +GELDER+F N++DSLLG
Sbjct: 299 QQDNLTFIDPEGLTVFKDLLQGGSLKSSLLILEKEYENAINTRGELDERMFANDEDSLLG 358
Query: 363 SGSLSGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMVVTPV 420
SGSLSGGA+N+ G KRK+D +ASP K+I+SP +SP R S P G + + +TPV
Sbjct: 359 SGSLSGGAINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLS-PKGNSFCNSKMAPITPV 417
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STAMTTAKWLR+ + PLPSKPS EL RF +CDKDVT D++ RA IIL AIF SS GE+
Sbjct: 418 STAMTTAKWLRSTVSPLPSKPSGELLRFFSACDKDVTDDIVHRAGIILGAIFTSSSFGEQ 477
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
T +++ AN MD IW EQR++EALKLYYRVLE+MC AE+Q+L NLT LL+NERFHRC
Sbjct: 478 ICT-NMRSANRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTLLLSNERFHRC 536
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
M+ACSAELVLATHKTVT++FPAVLE+TGITAFDLSKVIE F+RHE++LPREL+RHLNSLE
Sbjct: 537 MIACSAELVLATHKTVTLMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLE 596
Query: 601 ERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPV 660
ERLLESM WEKGSSMYNSL VARPVLS EINRLGLLA+PMPSLDAIA H N S GGL P+
Sbjct: 597 ERLLESMSWEKGSSMYNSLIVARPVLSIEINRLGLLAEPMPSLDAIAAHHNISMGGLPPL 656
Query: 661 HSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQ 720
K E ++ +IRSPKR CT+ R V V+ N+F S VKD + LK LPPPLQ
Sbjct: 657 -PFQKQERLQDKD-EIRSPKRACTERRHVPVDSNSFRSQVKDSI----KLK---LPPPLQ 707
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SAFASPTRPNP GGETCAETGI +FF KI+KLAA+RI ++ ERLQLSQQ+ E VY L Q
Sbjct: 708 SAFASPTRPNPAAGGETCAETGIAVFFSKISKLAAIRIRSLCERLQLSQQVLERVYSLVQ 767
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
QIL+Q+T LFFNRHIDQIILC YGVAKISQL L+F+EI++ YRKQPQCKPQVFRSV+V
Sbjct: 768 QILSQQTGLFFNRHIDQIILCSIYGVAKISQLQLSFKEIVFGYRKQPQCKPQVFRSVYVH 827
Query: 841 WASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
W +G++ +DHVDIITFYN++F+PAVKPLLVE+GP + + GP P
Sbjct: 828 WPPTSHNGKTGEDHVDIITFYNEVFIPAVKPLLVEVGPGASPKR-------KEEGKGPYP 880
Query: 901 GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
SP+++ FP LPDMSPKKVSATHNVYVSPLR+SKMD L+S S KSYYACVGEST+A+QSP
Sbjct: 881 ESPRLARFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSPKSYYACVGESTYAFQSP 940
Query: 961 SKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLY-LQNGSAAAS 1012
SKDL IN+RLNS ++V G LNFD +VSD +VA+SL +QN AA+
Sbjct: 941 SKDLKAINNRLNSWKKVSGRLNFD-------IVSDLVVASSLNGVQNAKPAAT 986
>gi|357148663|ref|XP_003574849.1| PREDICTED: retinoblastoma-related protein 1-like [Brachypodium
distachyon]
Length = 1000
Score = 1198 bits (3100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/992 (61%), Positives = 753/992 (75%), Gaps = 33/992 (3%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
E R DLCK+ L+++E+ ++ ++LF+ETK +LL+++S++G+G PEE +RFW AFVL+ V
Sbjct: 2 EQRFADLCKSKLALNESMMRQAMQLFKETKKILLSSMSSLGSGSPEEIQRFWSAFVLFCV 61
Query: 85 RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
RL + + D L ILR ++ +VDFFKE+PQF +K G +L+ +YG+DWE
Sbjct: 62 SRLGKAG-----KAKEDGGITLHQILRAFEIKLVDFFKEMPQFCIKVGCVLTGLYGSDWE 116
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLL 204
+LE +ELQA VHL L + YKR Y+E FL +D + + + S+Y+RFGWLL
Sbjct: 117 KKLELQELQATVVHLCSLGRHYKRAYQELFLSNDGK-PADNPSEPNAQLASEYYRFGWLL 175
Query: 205 FLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIA 264
F+ LRI SRFKDL+T LVS+LA+LI+H+PVR R F+I DSS F KKS+KGV+LIA
Sbjct: 176 FVLLRIQTNSRFKDLLTSITELVSVLAVLIVHIPVRLRKFSIEDSSFFAKKSDKGVNLIA 235
Query: 265 SLCSIYDTSEDDLRKIMEKTNTLIADILKKKPC-EASECKSENLENIDTDGLIYFENLMD 323
SLC + TS D+LRK +EKTNTLI DIL+KKPC +ASEC+ NL ID +GL +F+N M+
Sbjct: 236 SLCEKHLTSADELRKSLEKTNTLIMDILEKKPCMDASECQQNNLSFIDPEGLTFFKNFME 295
Query: 324 DSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSL 383
+ SL SSL IL+K+Y+NA KGELDER+F N+DDS LGSGSLSGGA+ + G KRK+D L
Sbjct: 296 EDSLKSSLLILDKEYENAINTKGELDERMFANDDDSFLGSGSLSGGAIKLPGTKRKYDVL 355
Query: 384 ASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV--VTPVSTAMTTAKWLRTVICPLPS 439
ASP K+ SP +SP R AS PNG + G SKM +TPVSTAMTTAKWLR+ I PLPS
Sbjct: 356 ASPSKSAISPSPMSPPRFCAS-PNGNSFG-NSKMAPPLTPVSTAMTTAKWLRSTISPLPS 413
Query: 440 KPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ 499
+PS EL RF +CDKDVT D+ RRA IIL AIF + GER T +++ N D IW EQ
Sbjct: 414 RPSGELLRFFSACDKDVTDDITRRAAIILGAIFTGNSFGERMCT-TVRSTNGFDAIWTEQ 472
Query: 500 RRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML 559
R++EALKLYYRVLE+MC AE+ VL NLTSLL+NERFHRCM+ACSAELVLATHKTVTM+
Sbjct: 473 RKMEALKLYYRVLESMCRAESHVLSGSNLTSLLSNERFHRCMIACSAELVLATHKTVTMM 532
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FPAVLE+TGITAFDLSKVIESF+RHE++LPREL+RHLNSLEERLLES+ WEKGSSMYNSL
Sbjct: 533 FPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESLAWEKGSSMYNSL 592
Query: 620 TVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSP 679
VARP LS EINRLGLLA+PMPSLDAI H + S GGL P+ K E SP ++ ++RSP
Sbjct: 593 IVARPTLSVEINRLGLLAEPMPSLDAIVAHHDISLGGLPPL-PFQKQERSPDKD-EVRSP 650
Query: 680 KRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA 739
KR CT+ R+VLV+ N+F SPVKD +K K L PPLQSAFASPTRPNP GGETCA
Sbjct: 651 KRACTERRNVLVDSNSFRSPVKD------TIKLKIL-PPLQSAFASPTRPNPAAGGETCA 703
Query: 740 ETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
ETGI +F KI KLAA+RI + ERLQL QQI E VY L QQI++Q+T+LFFNRHIDQII
Sbjct: 704 ETGIGVFLSKIAKLAAIRIKGLCERLQLPQQILERVYSLVQQIISQQTALFFNRHIDQII 763
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
LC YGVAKISQL+LTF+EII++YRKQPQCK QVFRSVFV S ++G++ +DHVDIIT
Sbjct: 764 LCSIYGVAKISQLSLTFKEIIFSYRKQPQCKLQVFRSVFVHRPSRSRTGKTGEDHVDIIT 823
Query: 860 FYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV 919
FYN++F+P VKPLLV+LG + K N E N D P P SP+++ FP LPDMSPKKV
Sbjct: 824 FYNEVFIPTVKPLLVDLGSGASPNKNN--GEKNA-TDVPFPESPRLTRFPTLPDMSPKKV 880
Query: 920 SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRG 979
SATHNVYVSPLR+SKMD L+S SSKSYYACVGESTHA+QSPSKDL IN RLNS ++V G
Sbjct: 881 SATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKAINTRLNSGKKVSG 940
Query: 980 TLNFDDVDVDVGLVSDSMVANSLYLQNGSAAA 1011
LNFD +VSD VA SL QNG++ +
Sbjct: 941 RLNFD-------VVSDLDVARSLSDQNGASTS 965
>gi|414869736|tpg|DAA48293.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
Length = 980
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/973 (63%), Positives = 744/973 (76%), Gaps = 24/973 (2%)
Query: 5 KPSVTASNNSESNAGDNDAT-EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
KPS ++ + A A+ E R DLCK L +DE+T ++ ++L +ET ++L +++S+
Sbjct: 6 KPSTSSGSGVTVRASVAAASIEERFADLCKAKLGLDESTTRQAMQLLKETNNILKSSMSS 65
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKE 123
+G G PEE ERFW A VLY V RLS K G + + GS +LC ILR KLNIVDFFKE
Sbjct: 66 LGGGSPEEIERFWSACVLYCVSRLS-KAGRSKEDGS----VSLCQILRASKLNIVDFFKE 120
Query: 124 LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDK 183
+PQF +K IL+ +YG+DWE RLE KELQAN VHLS+LS YKR Y+E FL +D
Sbjct: 121 MPQFCIKVAHILTGLYGSDWEKRLELKELQANVVHLSLLSSYYKRAYQELFLSNDGKSSD 180
Query: 184 QSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
S+ ++ SDY+RFGWLLFL LRI FSRFKDLVT TN LVS+LA+LIIHVPVR RN
Sbjct: 181 NSSESNNQE-ASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLRN 239
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEA-SEC 302
F+I DSS F KKS++GV LIASLC + TSED+L K +EKTNTLI DILKKKPC A S C
Sbjct: 240 FDIKDSSYFGKKSDRGVSLIASLCEKHHTSEDELSKALEKTNTLIMDILKKKPCPATSAC 299
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLG 362
+ +NL ID +GL F++L+ SL SL ILEK+Y+NA KGELDER+F N++DSLLG
Sbjct: 300 QQDNLSFIDPEGLTVFKDLLQGDSLKPSLIILEKEYENAINTKGELDERMFANDEDSLLG 359
Query: 363 SGSLSGGAVNITGAKRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTP 419
SGSLSGGA+N+ G KRK+D +ASP K+I+SP +SP R S P G G SKM TP
Sbjct: 360 SGSLSGGAINLPGTKRKYDVMASPAKSISSPNPMSPPRFCLS-PKG-NGFCNSKMAPSTP 417
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTAMTTAKWLR + PLPS+PS EL RF +CDKD+T D+ RA IIL AIF SS GE
Sbjct: 418 VSTAMTTAKWLRNTVSPLPSRPSGELLRFFSACDKDLTDDIAHRAGIILGAIFTSSSFGE 477
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
R T S++ A+ MD IW EQR++EALKLYYRVLE+MC AE+Q+L NLTSLL+NERFHR
Sbjct: 478 RICT-SMRSASRMDAIWTEQRKMEALKLYYRVLESMCRAESQILSGNNLTSLLSNERFHR 536
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
CM+ACSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIE F+RHE++LPREL+RHLNSL
Sbjct: 537 CMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSL 596
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EERLLESM WEKGSSMYNSL VARP LS EI+RLGLLA+PMPSLDAIA H N S GGL P
Sbjct: 597 EERLLESMAWEKGSSMYNSLIVARPALSVEISRLGLLAEPMPSLDAIAAHHNISLGGLPP 656
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPL 719
+ K E ++ ++RSPKR CT+ R+VLV+ N+ SPVKD + KP PPL
Sbjct: 657 L-PFQKQERLQDKD-EVRSPKRACTERRNVLVDSNSLRSPVKDII--------KPKLPPL 706
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
QSAFASPTRPNP GGETCAETGI +FF KI+KLAA+RI ++ ERLQL QQ+ E VY L
Sbjct: 707 QSAFASPTRPNPAAGGETCAETGIGVFFSKISKLAAIRIRSLCERLQLPQQVLERVYSLV 766
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
QQIL+Q+T LFFNRHIDQIILC YGVAKISQL L+F+EII+ YRKQPQCKPQVFRSV+V
Sbjct: 767 QQILSQQTGLFFNRHIDQIILCSIYGVAKISQLELSFKEIIFGYRKQPQCKPQVFRSVYV 826
Query: 840 DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPC 899
W ++G++ +DHVDIITFYN++F+PAVK LLVE+GP +A + E + GP
Sbjct: 827 HWPPRSRNGKTGEDHVDIITFYNEVFIPAVKSLLVEVGPGASASPKKKEEEKGPADVGPF 886
Query: 900 PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
P SP+++ FP LPDMSPKKVSATHNVYVSPLR+SKMD L+S SSKSYYACVGEST+A+QS
Sbjct: 887 PESPRLARFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQS 946
Query: 960 PSKDLTDINHRLN 972
PSKDL IN+RLN
Sbjct: 947 PSKDLKAINNRLN 959
>gi|254789784|sp|A9UL13.1|RBR1_WHEAT RecName: Full=Retinoblastoma-related protein 1; Short=TaRBR1
gi|62956047|gb|AAY23366.1| retinoblastoma-related protein 1 [Triticum aestivum]
Length = 957
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/988 (63%), Positives = 743/988 (75%), Gaps = 41/988 (4%)
Query: 47 IKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNL 106
++LF+ETK +LL+++S++G+G PEE ER W A VLY V +L N + D L
Sbjct: 1 MQLFKETKIILLSSMSSLGSGSPEEIERSWCACVLYCVSKLG-----NAGKAKEDRGITL 55
Query: 107 CHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSY 166
ILR L IVDFFKE+PQF +K G IL+ +YG+DWE RLE +ELQAN VHL L + Y
Sbjct: 56 RQILRAFDLKIVDFFKEMPQFCIKVGFILTGLYGSDWEKRLELQELQANLVHLCSLGRHY 115
Query: 167 KRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGL 226
+R Y+E FL +D S+ + S+Y+ FGWLLFL LR A S K+L+T T L
Sbjct: 116 RRAYQELFLLNDGKPANNSSELNVQ-QASEYYDFGWLLFLVLRNQASSAVKNLLTSTTEL 174
Query: 227 VSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNT 286
VS+LA+LIIH+PVR RNF+I DSS F KKS+KGV+LIASLC Y TSED+L K ++KTN
Sbjct: 175 VSVLAVLIIHIPVRLRNFSIEDSSCFAKKSDKGVNLIASLCERYLTSEDELSKALQKTNI 234
Query: 287 LIADILKKKPC-EASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNK 345
LI DILKKKPC + SEC+ +L ID +GL +F+N +++ SL SSL +LEK+Y N K
Sbjct: 235 LIKDILKKKPCSDVSECQQGSLSFIDPEGLTFFKNFLEEDSLKSSLQVLEKEYVNGLDTK 294
Query: 346 GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS-LASPVKTITS--PLSPHRSSAS 402
GELD R+F NE+DSLLGSGSLSGGA+ + G KRK+D +ASP K+ S P+SP R S
Sbjct: 295 GELDARMFANEEDSLLGSGSLSGGALKLPGTKRKYDDVMASPTKSTASRAPMSPPRFCPS 354
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
PNG + + TPVSTAMTTAKWLR+ I PLPSKPS EL RF +CDKDVT D+
Sbjct: 355 -PNGNSFCNSKMAPFTPVSTAMTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITC 413
Query: 463 RAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQV 522
RA IIL AIF S GER T SL+ + MD IW EQR++EALKLYYRVLE+MC AE+Q+
Sbjct: 414 RAAIILGAIFTGSSFGERMCT-SLRNTSGMDAIWTEQRKMEALKLYYRVLESMCRAESQI 472
Query: 523 LHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFI 582
L NLTSLL+NERFHRCM+ACSAELVLATHKTVTM+FPAVLE+TGITAFDLSKVIESF+
Sbjct: 473 LSGSNLTSLLSNERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFV 532
Query: 583 RHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS 642
RHE+SLPREL+RHLNSLEERLLESM WEKGSSMYNSL VARP LSAEINRLGLLA+PMPS
Sbjct: 533 RHEDSLPRELKRHLNSLEERLLESMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPS 592
Query: 643 LDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKD 702
LDAIA H + S GGL P+ HK P ++ ++RSPKR CT+ R+VLV+ N+F SPVKD
Sbjct: 593 LDAIAVHHDISLGGLPPL-PFHKQ---PDKD-EVRSPKRACTERRNVLVD-NSFRSPVKD 646
Query: 703 RLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMV 762
+KSK L PPLQSAFASPTRPNP GGETCAETGI +F KI KLAA+RI +
Sbjct: 647 ------AIKSKFL-PPLQSAFASPTRPNPAAGGETCAETGIGVFLSKITKLAAIRIKCLC 699
Query: 763 ERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYN 822
ERLQLSQQI E VY L QQI++Q+T+LFFNRHIDQIILCC YGVAKISQL LTF+EII++
Sbjct: 700 ERLQLSQQILERVYSLVQQIISQQTALFFNRHIDQIILCCIYGVAKISQLALTFKEIIFS 759
Query: 823 YRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTA 882
YRKQ QCKPQVFRSV+V+W S +SG+ +DHVDIITFYN++F+P VKPLLV+LGP GT+
Sbjct: 760 YRKQSQCKPQVFRSVYVNWPSRSRSGKIGEDHVDIITFYNEVFIPTVKPLLVDLGP-GTS 818
Query: 883 MKTNRVSEVNHNNDGPC-PGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISH 941
NR +E D P SP++S FP LPDMSPKKVSATHNVYVSPLR+SKMD L+S
Sbjct: 819 --PNRNNEPKSGGDAASFPESPRLSRFPNLPDMSPKKVSATHNVYVSPLRSSKMDTLLSP 876
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANS 1001
SSKSYYACVGESTHA+QSPSKDL IN RLNS ++V G LNFD +VSD +VA S
Sbjct: 877 SSKSYYACVGESTHAFQSPSKDLNAINTRLNSGKKVNGRLNFD-------VVSDLVVARS 929
Query: 1002 LYLQNGSAAAS-----TCAVLKPEQPDP 1024
L QNGS+AA+ T +K EQ DP
Sbjct: 930 LSDQNGSSAAAMAVFGTKTPVKGEQQDP 957
>gi|115485753|ref|NP_001068020.1| Os11g0533500 [Oryza sativa Japonica Group]
gi|122248791|sp|Q2R374.2|RBR2_ORYSJ RecName: Full=Retinoblastoma-related protein 2; Short=OsRBR2
gi|108864448|gb|ABA94065.2| retinoblastoma-related protein 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113645242|dbj|BAF28383.1| Os11g0533500 [Oryza sativa Japonica Group]
gi|215694317|dbj|BAG89310.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616086|gb|EEE52218.1| hypothetical protein OsJ_34123 [Oryza sativa Japonica Group]
Length = 978
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/991 (53%), Positives = 677/991 (68%), Gaps = 38/991 (3%)
Query: 23 ATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLY 82
A EARL DLCK L VDE E + E K LLA+ S G+ PE+AE+ FAFVLY
Sbjct: 8 AVEARLADLCKE-LGVDEGVAGEAAAVLEEGKGALLASPS-FGSKSPEDAEKLCFAFVLY 65
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
V +L E + GS+ L IL+ KL DFFKE + + +L + YG+D
Sbjct: 66 CVSKLKET-----KAGSSG--VRLWEILKGCKLKYDDFFKESQRLASRIDQVLGSRYGSD 118
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
WE RLE K+L+ L+ S+ Y + + E FL + Q ++T+ I DY RFGW
Sbjct: 119 WEARLELKQLENLVNLLADASRFYCKAFNELFLSPSTD---QEPGSTTN--IPDYIRFGW 173
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
LLFL LR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ KGVDL
Sbjct: 174 LLFLILRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDL 233
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ SLC Y TSED L+++M K+ +I +K ASE K+ NL+ IDTDGL+YF++L+
Sbjct: 234 LPSLCHNYHTSEDRLKEMMGKSYKVIEVFFSRKAINASEFKTVNLDKIDTDGLMYFKDLV 293
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
DD S+L LEK + T +GELD +F+ +D +L + + SG + N +KR F++
Sbjct: 294 DDEIFQSNLEKLEK-LSSTTGCQGELDLEMFLTSNDYVLNAENSSGSSANFGCSKRVFET 352
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
LASP KTI + L+ S +S NG G+ + +TPV++AMTTAKWLR VI LP KPS
Sbjct: 353 LASPTKTIKNMLAAPSSPSSPANG---GSIKIVQMTPVTSAMTTAKWLRDVISSLPDKPS 409
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
++LE FL SCD D+T+DV++R IILEAIFP+ + +R + L AN D WAE R++
Sbjct: 410 SKLEEFLSSCDTDLTSDVVKRVSIILEAIFPTKSI-DRGTSIGLNCANAFDIPWAEARKM 468
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA KLYYRVLEA+C AE+Q + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPA
Sbjct: 469 EASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPA 528
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
VLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL VA
Sbjct: 529 VLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSLVVA 588
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
RP LS EIN LGLLA+PMPSLD I + GL P S P N +SPKR
Sbjct: 589 RPSLSTEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRWPSAGPDGNCYPQSPKRL 648
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
CT+ R+ LVERN+ T P K GL+ LK+K PLQ+ FASPT NP G E CA G
Sbjct: 649 CTESRNSLVERNSQTPPPKQSQTGLSILKAK--YHPLQATFASPTVSNPVSGNEKCAVVG 706
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IFF KI KLAA+RI + ERL+ +++ SVY +F+QIL+Q+T+LFFNRH+DQIILCC
Sbjct: 707 VQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIFKQILDQQTALFFNRHVDQIILCC 765
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YGVAK+SQL+LTF+EI+ NY+++PQCKP+VFRS+FV S ++G HVDII FYN
Sbjct: 766 LYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFV--GSTNRNGGFGSRHVDIIVFYN 823
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
++FVP VKPLLV L P+ T + R N + PGSPK S F LPDMSPKKVS++
Sbjct: 824 QVFVPTVKPLLVALMPSSTRPEDKR------NTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 923 HNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTL 981
HNVYVSPLR +KMDAL+S SS+S+YAC+GEST A+QSPSKDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 982 NFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
NFD +VSDS+VA SL NG +A+S
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASS 961
>gi|218185868|gb|EEC68295.1| hypothetical protein OsI_36358 [Oryza sativa Indica Group]
Length = 978
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/991 (53%), Positives = 677/991 (68%), Gaps = 38/991 (3%)
Query: 23 ATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLY 82
A EARL DLCK L VDE E + E K LLA+ S G+ PE+AE+ FAFVLY
Sbjct: 8 AVEARLADLCKE-LGVDEGVAGEAAAVLEEGKGALLASPS-FGSKSPEDAEKLCFAFVLY 65
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
V +L E + GS+ L IL+ KL DFFKE + + +L + YG+D
Sbjct: 66 CVSKLKET-----KAGSSG--VRLWEILKGCKLKYDDFFKESQRLASRIDQVLGSRYGSD 118
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
WE RLE K+L+ L+ S+ Y + + E FL + Q ++T+ I DY RFGW
Sbjct: 119 WEARLELKQLENLVNLLADASRFYCKAFNELFLSPSTD---QEPGSTTN--IPDYIRFGW 173
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
LLFL LR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ KGVDL
Sbjct: 174 LLFLILRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDL 233
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ SLC Y TSED L+++M K+ +I +K ASE K+ NL+ IDTDGL+YF++L+
Sbjct: 234 LPSLCHNYHTSEDRLKEMMGKSYKVIEVFFSRKAINASEFKTVNLDKIDTDGLMYFKDLV 293
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
DD S+L LEK + T +GELD +F+ +D +L + + SG + N +KR F++
Sbjct: 294 DDEIFQSNLEKLEK-LSSTTGCQGELDLEMFLTSNDYVLNAENSSGSSANFGCSKRVFET 352
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
LASP KTI + L+ S +S NG G+ + +TPV++AMTTAKWLR VI LP KPS
Sbjct: 353 LASPTKTIKNMLAAPSSPSSPANG---GSIKIVQMTPVTSAMTTAKWLRDVISSLPDKPS 409
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
++LE FL SCD D+T+DV++R IILEAIFP+ + +R + L AN D WAE R++
Sbjct: 410 SKLEEFLSSCDMDLTSDVVKRVSIILEAIFPTKSI-DRGTSIGLNCANAFDIPWAEARKM 468
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA KLYYRVLEA+C AE+Q + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPA
Sbjct: 469 EASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPA 528
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
VLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL VA
Sbjct: 529 VLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSLVVA 588
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
RP LS EIN LGLLA+PMPSLD I + GL P S + P N +SPKR
Sbjct: 589 RPSLSTEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRRPSAGPDGNCYPQSPKRL 648
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
CT+ R+ LVE N+ T P K GL+ LK+K PLQ+ FASPT NP G E CA G
Sbjct: 649 CTESRNSLVEHNSQTPPPKQSQTGLSILKAK--YHPLQATFASPTVSNPVSGNEKCAVVG 706
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IFF KI KLAA+RI + ERL+ +++ SVY +F+QIL+Q+T+LFFNRH+DQIILCC
Sbjct: 707 VQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIFKQILDQQTALFFNRHVDQIILCC 765
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YGVAK+SQL+LTF+EI+ NY+++PQCKP+VFRS+FV S ++G HVDII FYN
Sbjct: 766 LYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFV--GSTNRNGGFGSRHVDIIVFYN 823
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
++FVP VKPLLV L P+ T + R N + PGSPK S F LPDMSPKKVS++
Sbjct: 824 QVFVPTVKPLLVALMPSSTRPEDKR------NTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 923 HNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTL 981
HNVYVSPLR +KMDAL+S SS+S+YAC+GEST A+QSPSKDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 982 NFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
NFD +VSDS+VA SL NG +A+S
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASS 961
>gi|62956053|gb|AAY23369.1| retinoblastoma-related protein 2 [Oryza sativa]
Length = 978
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/991 (53%), Positives = 677/991 (68%), Gaps = 38/991 (3%)
Query: 23 ATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLY 82
A EARL DLCK L VDE E + E K LLA+ S G+ PE+AE+ FAFVLY
Sbjct: 8 AVEARLADLCKE-LGVDEGVACEAAAVLEEGKGALLASPS-FGSKSPEDAEKLCFAFVLY 65
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
V +L E + GS+ L ILR KL DFFKE + + + +L + YG+D
Sbjct: 66 CVSKLKET-----KAGSSG--VRLWEILRGCKLKYDDFFKESQRLVSRIDQVLGSRYGSD 118
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
WE RLE K+ + L+ S+ Y + + E FL + Q ++T+ I DY RFGW
Sbjct: 119 WEARLELKQSENLVNLLADASRFYCKAFNELFLSPSTD---QEPGSTTN--IPDYIRFGW 173
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
LLFL LR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ KGVDL
Sbjct: 174 LLFLILRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDL 233
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ SLC Y TSED L+++M K+ +I +K ASE K+ NL+ IDTDGL+YF++L+
Sbjct: 234 LPSLCHNYHTSEDRLKEMMGKSYKVIEVFFSRKAINASEFKTVNLDKIDTDGLMYFKDLV 293
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
DD S+L LEK + T +GELD +F+ +D +L + + SG + N +KR F++
Sbjct: 294 DDEIFQSNLEKLEK-LSSTTGCQGELDLEMFLTSNDYVLNAENSSGSSANFGCSKRVFET 352
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
LASP KTI + L+ S +S NG G+ + +TPV++AMTTAKWLR VI LP KPS
Sbjct: 353 LASPTKTIKNMLAAPSSPSSPANG---GSIKIVQMTPVTSAMTTAKWLRDVISSLPDKPS 409
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
++LE FL SC+ D+T+DV++R IILEAIFP+ + +R + L AN D WAE R++
Sbjct: 410 SKLEEFLSSCNMDLTSDVVKRVSIILEAIFPTKSI-DRGTSIGLNCANAFDIPWAEARKM 468
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA KLYYRVLEA+C AE+Q + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPA
Sbjct: 469 EASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPA 528
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
VLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL VA
Sbjct: 529 VLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSLVVA 588
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
RP LS EIN LGLLA+PMPSLD I + GL P S + P N +SPKR
Sbjct: 589 RPSLSTEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRRPSAGPDGNCYPQSPKRL 648
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
CT+ R+ LVE N+ T P K GL+ LK+K PLQ+ FASPT NP G E CA G
Sbjct: 649 CTESRNSLVEHNSQTPPPKQSQTGLSILKAK--YHPLQATFASPTVSNPVSGNEKCAVVG 706
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IFF KI KLAA+RI + ERL+ +++ SVY +F+QIL+Q+T+LFFNRH+DQIILCC
Sbjct: 707 VQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIFKQILDQQTALFFNRHVDQIILCC 765
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YGVAK+SQL+LTF+EI+ NY+++PQCKP+VFRS+FV S ++G HVDII FYN
Sbjct: 766 LYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFV--GSTNRNGGFGSRHVDIIVFYN 823
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
++FVP VKPLLV L P+ T + R N + PGSPK S F LPDMSPKKVS++
Sbjct: 824 QVFVPTVKPLLVALMPSSTRPEDKR------NTNSQIPGSPKSSPFSNLPDMSPKKVSSS 877
Query: 923 HNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTL 981
HNVYVSPLR +KMDAL+S SS+S+YAC+GEST A+QSPSKDL IN RLN RR+ +
Sbjct: 878 HNVYVSPLRQTKMDALLSPSSRSFYACIGESTQAFQSPSKDLAAINSRLNYPTRRINTRI 937
Query: 982 NFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
NFD +VSDS+VA SL NG +A+S
Sbjct: 938 NFD-------MVSDSVVAGSLGQPNGGSASS 961
>gi|343960572|dbj|BAK64057.1| retinoblastoma-related protein;3 [Physcomitrella patens subsp.
patens]
Length = 1068
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/994 (49%), Positives = 655/994 (65%), Gaps = 59/994 (5%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
+ E R + C+ GL +D+ T ++ ++LF+E+K LLLANI +IG E+ ER W VL
Sbjct: 90 EGLEGRFREHCEVGLCLDDPTLQQALRLFKESKPLLLANIDSIGTSTVEDTERLWGGCVL 149
Query: 82 YLVRRLS-EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYG 140
Y+V+ LS + + SN F L ++R K+++++FFKELP FLVK GPI+ +YG
Sbjct: 150 YVVKALSCGATVDGDKSESNAVGFTLSQLMRQTKISVIEFFKELPHFLVKVGPIVKQMYG 209
Query: 141 ADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAST---SGYISDY 197
+WE RL+ KE+QANFVHL+ L +KR+Y++FFL D + S + S ++S +
Sbjct: 210 DEWEKRLQVKEVQANFVHLTALFTYFKRVYQDFFLSPDTFTNIVSRSLSGVRDEHHVSVH 269
Query: 198 HRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSN 257
+FGW+LFLALR+H +F DLVTCTN L++++ ILI+H+P R F++ D RF K+S+
Sbjct: 270 MQFGWMLFLALRMHVIQQFSDLVTCTNALMAVMVILILHMPPDLRKFSLQDPVRFAKRSS 329
Query: 258 KGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKK--KPCEASECKSENLENIDTDGL 315
+GVDL+ASLC+ Y +++D+ ++EK N I+ + K K S+ E+ I+ GL
Sbjct: 330 EGVDLVASLCATYYAADEDVSSLLEKANATISKLFGKPMKGLHGSQTL-EHFLGINPGGL 388
Query: 316 IYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITG 375
Y E LMD SL+++L +LEKDY+++ +++G LDER+FIN +D LLG+ LS + +G
Sbjct: 389 AYLEGLMDKKSLAANLRMLEKDYEDSYQSRGGLDERMFINGEDGLLGT--LSNESPRFSG 446
Query: 376 AKRKFDSLASPVK---------TITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTT 426
+KRKFD +ASPV+ + SP S H + TPV+ MTT
Sbjct: 447 SKRKFDIMASPVRFGAFSMGAAPSSPAASPWSSPVKHMGTQGSSGGKRPPSTPVTITMTT 506
Query: 427 AKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
AKWLRTVI PL ++PS EL+ F +SCD+D++ DV RAH++L+ IF + ER G
Sbjct: 507 AKWLRTVITPLAAEPSVELQLFFRSCDRDISADVKNRAHVLLDLIFSA----ER--GGGW 560
Query: 487 QG-ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 545
QG A LMD +W EQR+LEA+KLYY+VL AMC +E Q LH NLTSLL+NERFHRCM+ACS
Sbjct: 561 QGVAGLMD-VWPEQRKLEAIKLYYKVLGAMCRSEEQRLHTHNLTSLLSNERFHRCMIACS 619
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
AELVLATHKTVTM FPAVLE GITAFDLSKVIE F+RHEE+LPREL+RHLN++EER+LE
Sbjct: 620 AELVLATHKTVTMGFPAVLEPAGITAFDLSKVIEYFVRHEETLPRELKRHLNTIEERILE 679
Query: 606 SMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHI----------NFSSG 655
SM WEKGSSMYNSL VARP L+ EINRL LLADPMP+L+ +AT + S
Sbjct: 680 SMAWEKGSSMYNSLIVARPSLANEINRLCLLADPMPALENLATQVRPATVMHRIPGLSKS 739
Query: 656 GLSPVHSLHKH----ETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLK 711
G S + H +SP QNG S F SPVKDR +
Sbjct: 740 GHSGEVACAAHTPTSASSPPQNGSSTS--------------EAGFLSPVKDRPSAFSAFS 785
Query: 712 S---KPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLS 768
S L PLQSAFASP RP+P GGGETCA+T IN+FF K LAAVRI + ER+
Sbjct: 786 SPMRNRLRAPLQSAFASPQRPSPLGGGETCADTVINVFFQKALVLAAVRIRTVCERIGQP 845
Query: 769 QQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQ 828
Q + E VY +FQ L+ TSLFFNRHIDQ++LC YGV K+S++++ FR+II++YR QPQ
Sbjct: 846 QHLIERVYKVFQHALHHETSLFFNRHIDQLVLCTIYGVCKVSKVDVKFRDIIHHYRSQPQ 905
Query: 829 CKPQVFRSVFVDWASARQSGRSEQ-DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNR 887
K V R+VF+D R++G++ + DII FYN +FV K LV++ ++M++ R
Sbjct: 906 NKLHVVRNVFIDQPPLRRAGKTGGLESGDIIKFYNDVFVHVTKKFLVQVD-TNSSMRSPR 964
Query: 888 VSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYY 947
+ + NDG PGSP S+F PD+SPKKVSA HNV+VSPLR+SK+D L+S +++ Y
Sbjct: 965 KAHGSDGNDGEAPGSPVASIFSTFPDISPKKVSALHNVFVSPLRSSKVDKLMSPRTRTLY 1024
Query: 948 ACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
ACVGEST YQSPSKDLT IN+RLN G L
Sbjct: 1025 ACVGESTRDYQSPSKDLTAINNRLNKRFIAHGDL 1058
>gi|343960570|dbj|BAK64056.1| retinoblastoma-related protein;2 [Physcomitrella patens subsp.
patens]
Length = 1071
Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/1013 (48%), Positives = 653/1013 (64%), Gaps = 59/1013 (5%)
Query: 4 TKPSVTASNNSESNAGDND------------ATEARLTDLCKNGLSVDENTYKEIIKLFR 51
TK S S + SN GD E R + C+ GL +D T KE + LF+
Sbjct: 60 TKSSGPGSGDRTSNDGDVKPGKKVWSPVYLGGLEGRFREYCEVGLCLDLQTSKEAMHLFK 119
Query: 52 ETKHLLLANISAIGNGMPEEAERFWFAFVLYLVR--RLSEKNGENLQQGSNDNEFNLCHI 109
E+K LL+AN ++G G EE ER W A VLY+V+ R G + + SN F L +
Sbjct: 120 ESKSLLIANADSLGTGTVEETERLWGACVLYVVKAFRCGAAVGGDKSE-SNAVGFTLSQL 178
Query: 110 LRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRI 169
+R+ K+++V+FFKELP FL+K GPI+ +YG +WE RL+ KE+QANFVHL+ L YKR+
Sbjct: 179 MRLTKISVVEFFKELPHFLMKVGPIVKQMYGDEWEKRLQVKEVQANFVHLTALFTYYKRV 238
Query: 170 YREFFLPSDANGDKQSAAASTSGYISDYH-----RFGWLLFLALRIHAFSRFKDLVTCTN 224
Y++FFL D + S S SG D+H +FGW+LFLALR+H +F DLVTCTN
Sbjct: 239 YQDFFLSPDTFSNIVSR--SLSGVTDDHHVSIHMQFGWMLFLALRMHVIQQFSDLVTCTN 296
Query: 225 GLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT 284
L++++ ILI+H+P R F++ D RF K+S++G+ L+ASLC+ Y +++D+ ++EK
Sbjct: 297 ALLAVMVILILHMPPDLRKFSLQDPVRFAKRSSEGIHLVASLCATYYAADEDVLNLLEKA 356
Query: 285 NTLIADILKKKPCEASECK-SENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATR 343
N I+ + K + + SE+ I+ GL Y E MD+ SL+S+L +LEKDY++A +
Sbjct: 357 NATISKLFGKSMKDLHGLQTSEHFLGINLGGLSYLEGFMDNKSLASNLRVLEKDYEDAYQ 416
Query: 344 NKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVK---------TITSPL 394
++G LDER+FIN + LLG+ LS + TG+KRKFD +ASPV+ +
Sbjct: 417 SRGGLDERMFINGEYGLLGT--LSNESPRYTGSKRKFDIMASPVRFGAFSMGAAPSSPAA 474
Query: 395 SPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDK 454
SP S H + + TPV+ MTTAKWLRTVI PL S+PS EL+ F +SCD+
Sbjct: 475 SPWPSPVKHMSTQGSSGGKRPPSTPVTVTMTTAKWLRTVITPLASEPSEELQLFFRSCDR 534
Query: 455 DVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG-ANLMDNIWAEQRRLEALKLYYRVLE 513
D++ DV RAH++LE IF ER GS Q A MD IWAEQR+LEA+KLYY+VL
Sbjct: 535 DISADVKNRAHVLLELIFSV----ER--RGSWQNVAGFMDTIWAEQRKLEAVKLYYKVLG 588
Query: 514 AMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFD 573
AMC +E Q LH KNL+SLL+NERFHRCM+ACSAELVLATHKTVTM FPAVL+ GITAFD
Sbjct: 589 AMCRSEEQRLHTKNLSSLLSNERFHRCMIACSAELVLATHKTVTMGFPAVLDPAGITAFD 648
Query: 574 LSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRL 633
LSKVIE F+RHE++LPREL+RHLN++EER+LESM W KGSSMYNSL VARP L+ EINRL
Sbjct: 649 LSKVIEYFVRHEDTLPRELKRHLNTIEERILESMAWGKGSSMYNSLIVARPSLANEINRL 708
Query: 634 GLLADPMPSLDAIATHINFSSGGLSPVHSLHKHE--TSPGQNGDIR-----SPKRPCTDY 686
LLADPMP+L+ + + I S+ ++H+ T P G +
Sbjct: 709 CLLADPMPALENVGSQIRLST------DTVHRALVITKPDHAGYVECPALAPSSASSPPQ 762
Query: 687 RSVLVERNNFTSPVKDRLLGLNNLKS---KPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
F SP KDR + S L PLQSAFASP RP+P GGGETCA+T I
Sbjct: 763 SGSSTSETGFLSPAKDRPSAFSAFSSPMRSRLRAPLQSAFASPQRPSPLGGGETCADTVI 822
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
N+FF K LA VRI + ER+ Q + E VY +FQ L+ TSLFFNRHIDQ++LC
Sbjct: 823 NVFFQKALVLAGVRIRTVCERIGQPQHLIERVYKVFQHTLHHETSLFFNRHIDQLVLCTI 882
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ-DHVDIITFYN 862
YGV K+S++ + FR+II++YR QPQ K V R+VF+D R++G++ + DII FYN
Sbjct: 883 YGVCKVSKVEVKFRDIIHHYRSQPQNKLHVVRNVFIDQPPLRRAGKTGGLESGDIIKFYN 942
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
+FV A K LV++ + +++ R DG PGSP SVF + PD+SPKKVSA
Sbjct: 943 DVFVHATKKFLVQVD-TNSGVRSPRKIHGPDGEDGEAPGSPVASVFSSFPDISPKKVSAL 1001
Query: 923 HNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR 975
HNV+VSPLR+SK++ L+S +++ YACVGEST YQSPSKDLT IN+RLN+ R
Sbjct: 1002 HNVFVSPLRSSKVEKLMSPRTRTLYACVGESTRDYQSPSKDLTAINNRLNNKR 1054
>gi|326510877|dbj|BAJ91786.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510927|dbj|BAJ91811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/989 (51%), Positives = 649/989 (65%), Gaps = 40/989 (4%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
E DLCK L VDE E L E K + L G+ PE+ ER FAFVLY V
Sbjct: 2 ETHFADLCKE-LGVDEGVASEAAALLEEGKGVFLTP-PLFGSKSPEDVERLCFAFVLYCV 59
Query: 85 RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
+L G+ +++ S+ L IL KLN DFFK Q L K +L + YG DWE
Sbjct: 60 AKL---KGKGMKEESS--RVRLWKILEGCKLNYNDFFKGSQQLLSKLDHVLRSRYGTDWE 114
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLL 204
+ LE K+LQ+ L+ S+ Y + + E FL + Q ++TS D+ FGWL
Sbjct: 115 DLLELKQLQSLVNLLADASRFYCKAFNELFLSASTG---QEPGSTTSN--PDFFCFGWLF 169
Query: 205 FLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIA 264
FLALR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ +GVDL+A
Sbjct: 170 FLALRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTVRGVDLLA 229
Query: 265 SLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDD 324
SLC Y TSE+ L+++M K + I + K ASECK+E IDTDGLIYF +L+D
Sbjct: 230 SLCHNYHTSENRLKEMMGKFHKAIEEFFSTKAVRASECKTETSGKIDTDGLIYFRDLLDK 289
Query: 325 SSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLA 384
S+ LEK T +GELD +F+ + +++ + + S N++ KR F++LA
Sbjct: 290 ECFHSNFEKLEK-LTTTTSWEGELDLEMFLVNNGNIISAENSSRDFSNLSCPKRVFETLA 348
Query: 385 SPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAE 444
SP KTI + L+ S +S NG G+ + +TPV++AMTTAKWL VI LP KPS +
Sbjct: 349 SPAKTIKNMLTVPSSPSSPANG---GSVKVVQMTPVTSAMTTAKWLHEVISSLPEKPSTK 405
Query: 445 LERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEA 504
LE+FL SCD D+T+DV +R IILEAIFP+ G + L N D WAE R++EA
Sbjct: 406 LEKFLSSCDTDLTSDVTKRVSIILEAIFPTKPSGHCGGSMGLNCTNAFDIPWAEARKMEA 465
Query: 505 LKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL 564
KLYYRVLEA+C AE+ + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPAVL
Sbjct: 466 SKLYYRVLEAVCRAESLNTNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPAVL 525
Query: 565 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
E TG+TAFDLSK+IE+F+RHEESLPREL+RHLNSLEE+LLESM WEKGSS+YNSL VARP
Sbjct: 526 ESTGLTAFDLSKIIENFVRHEESLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLIVARP 585
Query: 625 VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCT 684
L++EINRLGLLA+ M SLD I NF + L P K P +NGD RSPKR C
Sbjct: 586 SLASEINRLGLLAESMLSLDDIVARQNFHAEDL-PATPSKKQAADPDENGDTRSPKRLCI 644
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGIN 744
+ RS LV++ T K LK+K PLQS FASPT NP G E CAE G++
Sbjct: 645 ESRSTLVDQIPQTPSAKQSY----TLKAKWC--PLQSTFASPTVSNPVGRNEKCAEVGVH 698
Query: 745 IFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFY 804
IFF KI KLAA+RI + ERL +Q E VY +F+QIL+Q+T+LFFNRHIDQ+ILC Y
Sbjct: 699 IFFSKILKLAAIRIRNLCERLGHVEQT-ERVYNIFKQILDQQTALFFNRHIDQLILCSLY 757
Query: 805 GVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKI 864
GVAK+SQL LTF+EI+ NY+++ QC P+VFRSVFV + +G HVDII FYN++
Sbjct: 758 GVAKVSQLTLTFKEIVNNYKREQQCMPEVFRSVFV--VNTDHNGGLGSRHVDIIIFYNEV 815
Query: 865 FVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHN 924
FVPAVKP LV L P+G + NHN+ PGSPK S F LPDMSPKKVS++HN
Sbjct: 816 FVPAVKPFLVALIPSGAHPDNKK----NHNSQ--IPGSPKSSPFSNLPDMSPKKVSSSHN 869
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTLNF 983
VY+SPLR +K DAL+S SS+S+YAC+GESTHAYQS S+DL IN+ LN + RR+ +NF
Sbjct: 870 VYISPLRQTKKDALLSPSSRSFYACIGESTHAYQSSSEDLAAINNCLNYTTRRINTRINF 929
Query: 984 DDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
D +VSDS+VA SL NG A+S
Sbjct: 930 D-------MVSDSVVAGSLGQPNGVPASS 951
>gi|268306346|gb|ACY95294.1| retinoblastoma-related protein [Hordeum vulgare subsp. vulgare]
Length = 975
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/991 (51%), Positives = 646/991 (65%), Gaps = 45/991 (4%)
Query: 23 ATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLY 82
A E DLCK L VDE E L E K + L G+ PE+ ER FAFVLY
Sbjct: 10 AVETHFADLCKE-LGVDEGVASEAAALLEEGKGVFLTP-PLFGSKSPEDVERLCFAFVLY 67
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
V +L G+ +++ S+ L IL KLN DFFK Q L K +L + YG D
Sbjct: 68 CVAKL---KGKGMKEESS--RVRLWKILEGCKLNYNDFFKGSQQLLSKLDHVLRSRYGTD 122
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
WE+ LE K+LQ+ L+ S+ Y + + E FL + Q ++TS D+ FGW
Sbjct: 123 WEDLLELKQLQSLVNLLADASRFYCKAFNELFLSASTG---QEPGSTTSN--PDFFCFGW 177
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
L FLALR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ +GVDL
Sbjct: 178 LFFLALRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTVRGVDL 237
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ASLC Y TS + L+++M K + I + K ASECK+E +DGLIYF +L+
Sbjct: 238 LASLCHNYHTSGNRLKEMMGKFHKAIEEFFSTKAVRASECKTET-----SDGLIYFRDLL 292
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
D S+ LEK T +GELD +F+ + +++ + + S N++ KR F++
Sbjct: 293 DKECFHSNFEKLEK-LTTTTSWEGELDLEMFLVNNGNIISAENSSRDFSNLSCPKRVFET 351
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
LASP KTI + L+ S +S NG G+ + +TPV++AMTTAKWL VI LP KPS
Sbjct: 352 LASPAKTIKNMLTVPSSPSSPANG---GSVKVVQMTPVTSAMTTAKWLHEVISSLPEKPS 408
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
+LE+FL SCD D+T+DV +R IILEAIFP+ G + L N D WAE R++
Sbjct: 409 TKLEKFLSSCDTDLTSDVTKRVSIILEAIFPTKPSGHCGGSMGLNCTNAFDIPWAEARKM 468
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA KLYYRVLEA+C AE+ + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPA
Sbjct: 469 EASKLYYRVLEAVCRAESLNTNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPA 528
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
VLE TG+TAFDLSK+IE+F+RHEESLPREL+RHLNSLEE+LLESM WEKGSS+YNSL VA
Sbjct: 529 VLESTGLTAFDLSKIIENFVRHEESLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLIVA 588
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
RP L++EINRLGLLA+ M SLD I NF + L P K P +NGD RSPKR
Sbjct: 589 RPSLASEINRLGLLAESMLSLDDIVARQNFHAEDL-PATPSKKQAADPDENGDTRSPKRL 647
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
C + RS LV++ T K LK+K PLQS FASPT NP G E CAE G
Sbjct: 648 CIESRSTLVDQIPQTPSAKQSY----TLKAKWC--PLQSTFASPTVSNPVGRNEKCAEVG 701
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
++I F KI KLAA+RI + ERL +Q E VY +F+QIL+Q+T+LFFNRHIDQ+ILC
Sbjct: 702 VHILFSKILKLAAIRIRNLCERLGHVEQT-ERVYNIFKQILDQQTALFFNRHIDQLILCS 760
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YGVAK+SQL LTF+EI+ NY+++ QC P+VFRSVFV + +G HVDII FYN
Sbjct: 761 LYGVAKVSQLTLTFKEIVNNYKREQQCMPEVFRSVFV--VNTDHNGGLGSRHVDIIIFYN 818
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
++FVPAVKP LV L P+G + NHN+ PGSPK S F LPDMSPKKVS++
Sbjct: 819 EVFVPAVKPFLVALIPSGAHPDNKK----NHNSQ--IPGSPKSSPFSNLPDMSPKKVSSS 872
Query: 923 HNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTL 981
HNVY+SPLR +K DAL+S SS+S+YAC+GESTHAYQS S+DL IN+ LN + RR+ +
Sbjct: 873 HNVYISPLRQTKKDALLSPSSRSFYACIGESTHAYQSSSEDLAAINNCLNYTTRRINTRI 932
Query: 982 NFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
NFD +VSDS+VA SL NG A+S
Sbjct: 933 NFD-------MVSDSVVAGSLGQPNGVPASS 956
>gi|168029230|ref|XP_001767129.1| Rb -related protein [Physcomitrella patens subsp. patens]
gi|162681625|gb|EDQ68050.1| Rb -related protein [Physcomitrella patens subsp. patens]
Length = 937
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/957 (49%), Positives = 629/957 (65%), Gaps = 41/957 (4%)
Query: 36 LSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENL 95
L +D T KE + LF+E+K LL+AN ++G G EE ER W A VLY+V+ + G +
Sbjct: 1 LCLDLQTSKEAMHLFKESKSLLIANADSLGTGTVEETERLWGACVLYVVKAF--RCGAAV 58
Query: 96 QQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQAN 155
G + +E N ++V+FFKELP FL+K GPI+ +YG +WE RL+ KE+QAN
Sbjct: 59 --GGDKSESNAVGTDMYWHGSVVEFFKELPHFLMKVGPIVKQMYGDEWEKRLQVKEVQAN 116
Query: 156 FVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYH-----RFGWLLFLALRI 210
FVHL+ L YKR+Y++FFL D + S S SG D+H +FGW+LFLALR+
Sbjct: 117 FVHLTALFTYYKRVYQDFFLSPDTFSNIVSR--SLSGVTDDHHVSIHMQFGWMLFLALRM 174
Query: 211 HAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIY 270
H +F DLVTCTN L++++ ILI+H+P R F++ D RF K+S++G+ L+ASLC+ Y
Sbjct: 175 HVIQQFSDLVTCTNALLAVMVILILHMPPDLRKFSLQDPVRFAKRSSEGIHLVASLCATY 234
Query: 271 DTSEDDLRKIMEKTNTLIADILKKKPCEASECK-SENLENIDTDGLIYFENLMDDSSLSS 329
+++D+ ++EK N I+ + K + + SE+ I+ GL Y E MD+ SL+S
Sbjct: 235 YAADEDVLNLLEKANATISKLFGKSMKDLHGLQTSEHFLGINLGGLSYLEGFMDNKSLAS 294
Query: 330 SLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVK- 388
+L +LEKDY++A +++G LDER+FIN + LLG+ LS + TG+KRKFD +ASPV+
Sbjct: 295 NLRVLEKDYEDAYQSRGGLDERMFINGEYGLLGT--LSNESPRYTGSKRKFDIMASPVRF 352
Query: 389 --------TITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSK 440
+ SP S H + + TPV+ MTTAKWLRTVI PL S+
Sbjct: 353 GAFSMGAAPSSPAASPWPSPVKHMSTQGSSGGKRPPSTPVTVTMTTAKWLRTVITPLASE 412
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG-ANLMDNIWAEQ 499
PS EL+ F +SCD+D++ DV RAH++LE IF ER GS Q A MD IWAEQ
Sbjct: 413 PSEELQLFFRSCDRDISADVKNRAHVLLELIFSV----ER--RGSWQNVAGFMDTIWAEQ 466
Query: 500 RRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML 559
R+LEA+KLYY+VL AMC +E Q LH KNL+SLL+NERFHRCM+ACSAELVLATHKTVTM
Sbjct: 467 RKLEAVKLYYKVLGAMCRSEEQRLHTKNLSSLLSNERFHRCMIACSAELVLATHKTVTMG 526
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FPAVL+ GITAFDLSKVIE F+RHE++LPREL+RHLN++EER+LESM W KGSSMYNSL
Sbjct: 527 FPAVLDPAGITAFDLSKVIEYFVRHEDTLPRELKRHLNTIEERILESMAWGKGSSMYNSL 586
Query: 620 TVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSP 679
VARP L+ EINRL LLADPMP+L+ + + I S+ + + T P G I
Sbjct: 587 IVARPSLANEINRLCLLADPMPALENVGSQIRLSTDTVHRALVI----TKPDHAGAITIS 642
Query: 680 KRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKS---KPLPPPLQSAFASPTRPNPGGGGE 736
S F SP KDR + S L PLQSAFASP RP+P GGGE
Sbjct: 643 LVLYLIGSS--TSETGFLSPAKDRPSAFSAFSSPMRSRLRAPLQSAFASPQRPSPLGGGE 700
Query: 737 TCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHID 796
TCA+T IN+FF K LA VRI + ER+ Q + E VY +FQ L+ TSLFFNRHID
Sbjct: 701 TCADTVINVFFQKALVLAGVRIRTVCERIGQPQHLIERVYKVFQHTLHHETSLFFNRHID 760
Query: 797 QIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ-DHV 855
Q++LC YGV K+S++ + FR+II++YR QPQ K V R+VF+D R++G++ +
Sbjct: 761 QLVLCTIYGVCKVSKVEVKFRDIIHHYRSQPQNKLHVVRNVFIDQPPLRRAGKTGGLESG 820
Query: 856 DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMS 915
DII FYN +FV A K LV++ + +++ R DG PGSP SVF + PD+S
Sbjct: 821 DIIKFYNDVFVHATKKFLVQVD-TNSGVRSPRKIHGPDGEDGEAPGSPVASVFSSFPDIS 879
Query: 916 PKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN 972
PKKVSA HNV+VSPLR+SK++ L+S +++ YACVGEST YQSPSKDLT IN+RLN
Sbjct: 880 PKKVSALHNVFVSPLRSSKVEKLMSPRTRTLYACVGESTRDYQSPSKDLTAINNRLN 936
>gi|357152101|ref|XP_003576010.1| PREDICTED: retinoblastoma-related protein 2-like [Brachypodium
distachyon]
Length = 878
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/891 (53%), Positives = 617/891 (69%), Gaps = 39/891 (4%)
Query: 126 QFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQS 185
Q K +L + YG DWEN+ E K+LQ+ ++ S+ Y++ + E F + + +S
Sbjct: 10 QLRSKIDEVLRSRYGPDWENQPELKQLQSLVNLMTDASRFYRKAFNELFSSASTCQESES 69
Query: 186 AAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFN 245
A + DY FGWLLFL LR + FKDLV+C +GLV+ILAIL+IHVP RFR+F
Sbjct: 70 TANNL-----DYTCFGWLLFLTLRSKSPELFKDLVSCIHGLVAILAILLIHVPARFRSFT 124
Query: 246 IHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE 305
I SS +K++ +GVDL+ASLC Y TSED L+++M K++ I + KP ASECK+E
Sbjct: 125 IEGSSHLIKQTERGVDLLASLCHNYHTSEDRLKEMMGKSHQAIEEYFSMKPLTASECKAE 184
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGS 365
L+ IDT GL YF++L+D+ S+L LEK + + +GELD ++F+ +D+++ +
Sbjct: 185 TLDKIDTVGLKYFKHLLDEECFQSNLENLEK-LSSTSSWEGELDLKMFLINNDNIVSAED 243
Query: 366 LSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
S + K F++L SP KTI + L+ S +S NG G+ M +TPV++AMT
Sbjct: 244 SS------SCPKHVFETLVSPTKTIKNMLTVPTSPSSPVNG---GSVKIMQMTPVTSAMT 294
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGS 485
T+KWLR VI P KPS++LE+FL SC++D+T+D+ +R +I+LEAIFP+ G+ +
Sbjct: 295 TSKWLREVISSSPEKPSSKLEQFLSSCNRDLTSDITKRVNIVLEAIFPTRSSGDWGGSIG 354
Query: 486 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 545
L AN D WAE R+ EA KLYYRVLEA+C AE+ + NLT LL+NERFHRC++ACS
Sbjct: 355 LNCANAFDIPWAEARKSEASKLYYRVLEAICRAESHNTNVNNLTPLLSNERFHRCLIACS 414
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
AELVLATHKTV M+FPAVLE TG+TAFDLSK+IE+F+RHEESLPREL+RHLN+LEE+LLE
Sbjct: 415 AELVLATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEESLPRELKRHLNALEEQLLE 474
Query: 606 SMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHK 665
SM WEKGSS+YNSL VARP L++EINRLGLLA+PMPSLD I H N S GL P K
Sbjct: 475 SMAWEKGSSLYNSLVVARPSLASEINRLGLLAEPMPSLDDIVAHQNIHSEGL-PATPSKK 533
Query: 666 HETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFAS 725
P N D +SPKR C + R+ L + N T P K + +K+K PLQS FAS
Sbjct: 534 RAAGPDDNDDPQSPKRLCKESRNTLADHNLLTPPPKQSHM----VKAKWH--PLQSTFAS 587
Query: 726 PTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
PT NP GG E CAE G+NIFF KI KLAA+RI + ERL+ +Q E VY +F+QIL+Q
Sbjct: 588 PTVSNPVGGNEKCAEVGVNIFFSKILKLAAIRIRNLCERLRHVEQT-ERVYNIFKQILDQ 646
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR 845
+T+LFFNRHIDQ+ILCC YGVAK+SQL LTF+EI+ NY+++ QCKP+VFRSVFV S
Sbjct: 647 QTTLFFNRHIDQLILCCLYGVAKVSQLTLTFKEIVTNYKREQQCKPEVFRSVFV--GSTN 704
Query: 846 QSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKV 905
++G HVDII FYN++FVPAVKP LV+L P+G +E N PGSPK
Sbjct: 705 RNGGLGSRHVDIIVFYNEVFVPAVKPFLVDLIPSGAR------AEDKKNPSSQIPGSPKP 758
Query: 906 SVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLT 965
S F LPDMSPKKVS++HNVYVSPLR +K DAL+S SS+S+YAC+GESTHA+QSPSKDL
Sbjct: 759 SPFSNLPDMSPKKVSSSHNVYVSPLRQTKKDALLSPSSRSFYACIGESTHAFQSPSKDLA 818
Query: 966 DINHRLN-SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCA 1015
IN+RLN ++RR+ +NFD +VSDS+VA SL NG A+S A
Sbjct: 819 AINNRLNYTSRRINTRINFD-------MVSDSVVAGSLGQPNGGPASSDPA 862
>gi|9716502|gb|AAF97520.1|AF250050_1 retinoblastoma related protein RBR1 [Zea mays]
Length = 867
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/880 (52%), Positives = 596/880 (67%), Gaps = 43/880 (4%)
Query: 148 EAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLA 207
+ K+L++ L+ S+ Y++ Y E F +G +S I +Y FGW LFL
Sbjct: 14 QQKQLESLVNLLTQGSRFYRKAYNELF-----SGVTTEQDPDSSTNIPEYMLFGWHLFLM 68
Query: 208 LRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLC 267
L + + FKDLV+C +GLV++LAIL+IHVP +FR+F I SS +K++ KGVDLIASLC
Sbjct: 69 LHLRSPELFKDLVSCIHGLVAVLAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDLIASLC 128
Query: 268 SIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSL 327
Y TSE+ L++++ K++ I DI K ASECK ENL+ IDTD L+YF+ L+D
Sbjct: 129 HNYHTSEERLKEMLHKSHNAIEDIFHMKALSASECKPENLDKIDTDDLMYFKGLIDMECF 188
Query: 328 SSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV 387
S+L +EK Y N+ KGELD + + +D + + +G + N+ +K F++LASP
Sbjct: 189 QSNLEKMEKLY-NSNSCKGELDFKSILINNDYVPYDENSTGDSTNLGHSKCAFETLASPT 247
Query: 388 KTI-------TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSK 440
KTI +SPLSP GG+ + +TPV++AMTTAKWLR VI LP K
Sbjct: 248 KTIKNMLTVPSSPLSP----------ATGGSVKIVQMTPVTSAMTTAKWLREVISSLPDK 297
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR 500
PS++L++FL SCD+D+T V R I+LEAIFP+ R V+ L AN D WAE R
Sbjct: 298 PSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCANAFDIPWAEAR 357
Query: 501 RLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 560
++EA KLYYRVLEA+C AE Q + NLT LL+NERFHRC++ACSA+LVLATHKTV M+F
Sbjct: 358 KVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVLATHKTVIMMF 417
Query: 561 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
PAVLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL
Sbjct: 418 PAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLI 477
Query: 621 VARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPK 680
VARP +++EINRLGLLA+PMPSLD + + N GL P K P N D RSPK
Sbjct: 478 VARPSVASEINRLGLLAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNSDPRSPK 536
Query: 681 RPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE 740
R C ++R+ +VERN T P K + +LK+K PLQS FASPT NP GG E CA+
Sbjct: 537 RSCNEFRNTVVERNLQTPPPKQSHMVSTSLKAK--CHPLQSTFASPTVCNPVGGNEKCAD 594
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
I+IFF KI KLAA+RI + ER+Q +Q E VY +F+QIL Q+T+LFFNRHIDQ+IL
Sbjct: 595 LTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVFKQILEQQTTLFFNRHIDQLIL 653
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
CC YGVAK+ QL LTFREI+ NY+++ QCKP+VF S+++ S ++G HV IITF
Sbjct: 654 CCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYI--GSTNRNGVLVSRHVGIITF 711
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN++FVPA KP LV L +GT E N G PGSPK S FP LPDMSPKKVS
Sbjct: 712 YNEVFVPAAKPFLVSLISSGTH------PEDKKNASGQIPGSPKPSPFPNLPDMSPKKVS 765
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRG 979
A+HNVYVSPLR +K+D L+S SS+S+YAC+GE THAYQSPSKDL IN RLN N R+V
Sbjct: 766 ASHNVYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNS 825
Query: 980 TLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
LNFD +VSDS+VA SL NG + + A P
Sbjct: 826 RLNFD-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 858
>gi|189039668|sp|Q9LKX9.2|RBR1_MAIZE RecName: Full=Retinoblastoma-related protein 1; Short=Rb1;
Short=ZmRBR1
gi|414591488|tpg|DAA42059.1| TPA: retinoblastoma1 [Zea mays]
Length = 867
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/880 (52%), Positives = 594/880 (67%), Gaps = 43/880 (4%)
Query: 148 EAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLA 207
+ K+L++ L+ S+ Y++ Y E F +G +S I +Y FGW LFL
Sbjct: 14 QQKQLESLVNLLTQGSRFYRKAYNELF-----SGVTTEQDPDSSTNIPEYMLFGWHLFLM 68
Query: 208 LRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLC 267
L + + FKDLV+C +GLV++LAIL+IHVP +FR+F I SS +K++ KGVDLIASLC
Sbjct: 69 LHLRSPELFKDLVSCIHGLVAVLAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDLIASLC 128
Query: 268 SIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSL 327
Y TSE+ L++++ K++ I DI K ASECK ENL+ IDTD L+YF+ L+D
Sbjct: 129 HNYHTSEERLKEMLHKSHNAIEDIFHMKALSASECKPENLDKIDTDDLMYFKGLIDMECF 188
Query: 328 SSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV 387
S+L +EK N+ KGELD + + +D + + +G + N+ +K F++LASP
Sbjct: 189 QSNLEKMEK-LCNSNSCKGELDFKSILINNDYIPYDENSTGDSTNLGHSKCAFETLASPT 247
Query: 388 KTI-------TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSK 440
KTI +SPLSP GG+ + +TPV++AMTTAKWLR VI LP K
Sbjct: 248 KTIKNMLTVPSSPLSP----------ATGGSVKIVQMTPVTSAMTTAKWLREVISSLPDK 297
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR 500
PS++L++FL SCD+D+T V R I+LEAIFP+ R V+ L AN D WAE R
Sbjct: 298 PSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCANAFDIPWAEAR 357
Query: 501 RLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 560
++EA KLYYRVLEA+C AE Q + NLT LL+NERFHRC++ACSA+LVLATHKTV M+F
Sbjct: 358 KVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVLATHKTVIMMF 417
Query: 561 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
PAVLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL
Sbjct: 418 PAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLI 477
Query: 621 VARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPK 680
VARP +++EINRLGLLA+PMPSLD + + N GL P K P N D RSPK
Sbjct: 478 VARPSVASEINRLGLLAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSPK 536
Query: 681 RPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE 740
R C + R+ +VERN T P K + +LK+K PLQS FASPT NP GG E CA+
Sbjct: 537 RSCNESRNTVVERNLQTPPPKQSHMVSTSLKAK--CHPLQSTFASPTVCNPVGGNEKCAD 594
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
I+IFF KI KLAA+RI + ER+Q +Q E VY +F+QIL Q+T+LFFNRHIDQ+IL
Sbjct: 595 VTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVFKQILEQQTTLFFNRHIDQLIL 653
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
CC YGVAK+ QL LTFREI+ NY+++ QCKP+VF S+++ S ++G HV IITF
Sbjct: 654 CCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYI--GSTNRNGVLVSRHVGIITF 711
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN++FVPA KP LV L +GT E N G PGSPK S FP LPDMSPKKVS
Sbjct: 712 YNEVFVPAAKPFLVSLISSGTH------PEDKKNASGQIPGSPKPSPFPNLPDMSPKKVS 765
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRG 979
A+HNVYVSPLR +K+D L+S SS+S+YAC+GE THAYQSPSKDL IN RLN N R+V
Sbjct: 766 ASHNVYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNS 825
Query: 980 TLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
LNFD +VSDS+VA SL NG + + A P
Sbjct: 826 RLNFD-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 858
>gi|162462832|ref|NP_001104876.1| retinoblastoma-related protein 1 [Zea mays]
gi|2352795|gb|AAB69649.1| retinoblastoma-related protein 1 [Zea mays]
gi|414591487|tpg|DAA42058.1| TPA: retinoblastoma1 [Zea mays]
Length = 866
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/880 (52%), Positives = 594/880 (67%), Gaps = 43/880 (4%)
Query: 148 EAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLA 207
+ K+L++ L+ S+ Y++ Y E F +G +S I +Y FGW LFL
Sbjct: 13 QQKQLESLVNLLTQGSRFYRKAYNELF-----SGVTTEQDPDSSTNIPEYMLFGWHLFLM 67
Query: 208 LRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLC 267
L + + FKDLV+C +GLV++LAIL+IHVP +FR+F I SS +K++ KGVDLIASLC
Sbjct: 68 LHLRSPELFKDLVSCIHGLVAVLAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDLIASLC 127
Query: 268 SIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSL 327
Y TSE+ L++++ K++ I DI K ASECK ENL+ IDTD L+YF+ L+D
Sbjct: 128 HNYHTSEERLKEMLHKSHNAIEDIFHMKALSASECKPENLDKIDTDDLMYFKGLIDMECF 187
Query: 328 SSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV 387
S+L +EK N+ KGELD + + +D + + +G + N+ +K F++LASP
Sbjct: 188 QSNLEKMEK-LCNSNSCKGELDFKSILINNDYIPYDENSTGDSTNLGHSKCAFETLASPT 246
Query: 388 KTI-------TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSK 440
KTI +SPLSP GG+ + +TPV++AMTTAKWLR VI LP K
Sbjct: 247 KTIKNMLTVPSSPLSP----------ATGGSVKIVQMTPVTSAMTTAKWLREVISSLPDK 296
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR 500
PS++L++FL SCD+D+T V R I+LEAIFP+ R V+ L AN D WAE R
Sbjct: 297 PSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCANAFDIPWAEAR 356
Query: 501 RLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 560
++EA KLYYRVLEA+C AE Q + NLT LL+NERFHRC++ACSA+LVLATHKTV M+F
Sbjct: 357 KVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVLATHKTVIMMF 416
Query: 561 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
PAVLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL
Sbjct: 417 PAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLI 476
Query: 621 VARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPK 680
VARP +++EINRLGLLA+PMPSLD + + N GL P K P N D RSPK
Sbjct: 477 VARPSVASEINRLGLLAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSPK 535
Query: 681 RPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE 740
R C + R+ +VERN T P K + +LK+K PLQS FASPT NP GG E CA+
Sbjct: 536 RSCNESRNTVVERNLQTPPPKQSHMVSTSLKAK--CHPLQSTFASPTVCNPVGGNEKCAD 593
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
I+IFF KI KLAA+RI + ER+Q +Q E VY +F+QIL Q+T+LFFNRHIDQ+IL
Sbjct: 594 VTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVFKQILEQQTTLFFNRHIDQLIL 652
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
CC YGVAK+ QL LTFREI+ NY+++ QCKP+VF S+++ S ++G HV IITF
Sbjct: 653 CCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYI--GSTNRNGVLVSRHVGIITF 710
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN++FVPA KP LV L +GT E N G PGSPK S FP LPDMSPKKVS
Sbjct: 711 YNEVFVPAAKPFLVSLISSGTH------PEDKKNASGQIPGSPKPSPFPNLPDMSPKKVS 764
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRG 979
A+HNVYVSPLR +K+D L+S SS+S+YAC+GE THAYQSPSKDL IN RLN N R+V
Sbjct: 765 ASHNVYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVNS 824
Query: 980 TLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
LNFD +VSDS+VA SL NG + + A P
Sbjct: 825 RLNFD-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 857
>gi|413925018|gb|AFW64950.1| retinoblastoma protein 2 [Zea mays]
Length = 866
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/870 (52%), Positives = 591/870 (67%), Gaps = 33/870 (3%)
Query: 159 LSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKD 218
L+ S+ Y++ Y E F +G +S DY FGW LFL LR + FKD
Sbjct: 24 LAEASRFYRKAYNELF-----SGLITEWEPESSTNTPDYMLFGWHLFLTLRSRSPELFKD 78
Query: 219 LVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
LV+C +GLV++LAIL++HVP +FR F I SS +K++ KGVDLIASLC Y TSE+ L+
Sbjct: 79 LVSCIHGLVAVLAILLVHVPAKFRTFTIEGSSHLIKQTEKGVDLIASLCHNYHTSEECLK 138
Query: 279 KIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDY 338
++M+K++ I ++ K ASECK+ENL+ IDTD L+YF+ L+D S+L +EK
Sbjct: 139 EMMDKSHKAIEEVFSMKALSASECKTENLDKIDTDRLMYFKGLIDMECFQSNLEKMEK-L 197
Query: 339 DNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHR 398
N+ + ELD ++ + +D + + +LS + N+ +K F++LASP KTI + L+
Sbjct: 198 CNSNNCEAELDFKLILTNNDYIPCAENLSRDSTNLGCSKCAFETLASPTKTIKNMLTVPS 257
Query: 399 SSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTT 458
S S NG G+ + +TP+++AMTTAKWLR VI LP KPS++L++ + SCD+D+T
Sbjct: 258 SPLSPTNG---GSVKIVQMTPITSAMTTAKWLREVISSLPEKPSSKLQQLMSSCDRDLTN 314
Query: 459 DVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
V R I+LEAIFP+ +R + L AN D +WA+ R++EA KLYYRVLEA+C A
Sbjct: 315 AVTERVSIVLEAIFPTKSSADRGGSLGLNCANAFDTLWADARKMEASKLYYRVLEAICRA 374
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 578
E Q + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPAVLE TG+T+FDLSK+I
Sbjct: 375 ELQNSNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPAVLESTGLTSFDLSKII 434
Query: 579 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLAD 638
E+F+RHEE+LPREL+RHLNSLEE++LESM WEKGSS+YNSL VARP +++EINR GLLA+
Sbjct: 435 ENFVRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSLIVARPSVASEINRFGLLAE 494
Query: 639 PMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTS 698
MPSLD + N GL P K N D RSPKRPC + RS +VE N T
Sbjct: 495 SMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPCNESRSTVVEHNLQTP 553
Query: 699 PVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRI 758
P K + L +LK+K PLQS FASPT NP GG E CA+ I IFF KI KLAA+RI
Sbjct: 554 PPKQCHMVLTSLKAK--CHPLQSTFASPTVSNPVGGNEKCADVTIQIFFSKILKLAAIRI 611
Query: 759 NAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFRE 818
+ ER+Q +Q E VY +F+QIL+Q+T+LFFNRHIDQ+ILCC YGVAK+ QL L+FRE
Sbjct: 612 RNLCERIQYMEQT-ERVYNVFKQILDQQTTLFFNRHIDQLILCCLYGVAKVCQLELSFRE 670
Query: 819 IIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGP 878
I+ NY+K+ QCKP+VF S+++ S +G HVDIITFYN++FVPA KP LV L
Sbjct: 671 ILNNYKKEAQCKPEVFLSIYI--GSRNHNGVLISRHVDIITFYNEVFVPAAKPFLVSLIS 728
Query: 879 AGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDAL 938
+GT E N G PGSPK+S FP LPDMSPKKVSA+HNVYVSPLR +KMD L
Sbjct: 729 SGTR------PEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPLRQTKMDLL 782
Query: 939 ISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRGTLNFDDVDVDVGLVSDSM 997
+S SS+S+YAC+GE THAYQSPSKDL IN RLN N RRV LNFD +VSDS+
Sbjct: 783 LSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFD-------MVSDSV 835
Query: 998 VANSLYLQNGSAA----ASTCAVLKPEQPD 1023
VA SL NG + A+ + L +PD
Sbjct: 836 VAGSLGQPNGGSTSLDPAAAFSPLSKRKPD 865
>gi|75244560|sp|Q8H0J6.1|RBR2_MAIZE RecName: Full=Retinoblastoma-related protein 2; Short=ZmRBR2
gi|24561941|emb|CAC82493.1| retinoblastoma-related protein [Zea mays]
Length = 866
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/878 (52%), Positives = 593/878 (67%), Gaps = 49/878 (5%)
Query: 159 LSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKD 218
L+ S+ Y++ Y E F +G +S I DY FGW LFL LR+ + FKD
Sbjct: 24 LAEASRFYRKAYNELF-----SGLITEWEPESSTNIPDYMLFGWHLFLNLRLRSPELFKD 78
Query: 219 LVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
LV+C +GLV++LAIL++HVP +FR F I SS +K++ KGVDLIASLC Y TSE+ L+
Sbjct: 79 LVSCIHGLVAVLAILLVHVPAKFRTFTIEGSSHLIKQTEKGVDLIASLCHNYHTSEECLK 138
Query: 279 KIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDY 338
++M+K++ I ++ K ASECK+ENL+ IDTD L+YF+ L+D S+L +EK
Sbjct: 139 EMMDKSHKAIEEVFSMKALSASECKTENLDKIDTDRLMYFKGLIDMECFQSNLEKIEK-L 197
Query: 339 DNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTI-------T 391
N+ + ELD ++ + +D + + +LS + N+ +K F++LASP KTI +
Sbjct: 198 CNSNNCEAELDFKLILTNNDYIPCAENLSRDSTNLGCSKCAFETLASPRKTIKNMLTVPS 257
Query: 392 SPLSPHRSSASHPNGIAGGATSKMV-VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLK 450
SPLSP G + K+V +TP+++AMTTAKWLR VI LP KPS++L++ +
Sbjct: 258 SPLSP-----------TNGCSVKIVQMTPITSAMTTAKWLREVISSLPEKPSSKLQQLMS 306
Query: 451 SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYR 510
SCD+D+T V R I+LEAIFP+ +R + L AN D +WA+ R++EA KLYYR
Sbjct: 307 SCDRDLTYAVTERVSIVLEAIFPTKSSADRGGSLGLNCANAFDTLWADARKMEASKLYYR 366
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGIT 570
VLEA+C AE Q + NLT LL+NERFHRC++ACSA++VLATHKTV M+FPAVLE G+T
Sbjct: 367 VLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADVVLATHKTVIMMFPAVLESAGLT 426
Query: 571 AFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEI 630
+FDLSK+IE+F+RHEE+LPREL+RHLNSLEE++LESM WEKGSS+YNSL VARP +++EI
Sbjct: 427 SFDLSKIIENFVRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSLIVARPSVASEI 486
Query: 631 NRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVL 690
NR GLLA+ MPSLD + N GL P K N D RSPKRPC + RS +
Sbjct: 487 NRFGLLAESMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPCNESRSPV 545
Query: 691 VERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKI 750
VE N T P K + L +LK+K PLQS FASPT NP GG E CA+ I IFF KI
Sbjct: 546 VEHNLQTPPPKQCHMVLTSLKAK--CHPLQSTFASPTVSNPVGGNEKCADVTIQIFFSKI 603
Query: 751 NKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKIS 810
KLAA+RI + ER+Q +Q E VY +F+QIL+Q+T+LFFNRHIDQ+ILCC YGVAK+
Sbjct: 604 LKLAAIRIRNLCERIQYMEQT-ERVYNVFKQILDQQTTLFFNRHIDQLILCCLYGVAKVC 662
Query: 811 QLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVK 870
QL L+FREI+ NY+K+ QCKP+VF S+++ S +G HVDIITFYN++FVPA K
Sbjct: 663 QLELSFREILNNYKKEAQCKPEVFLSIYI--GSRNHNGVLISRHVDIITFYNEVFVPAAK 720
Query: 871 PLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL 930
P LV L +GT E N G PGSPK+S FP LPDMSPKKVSA+HNVYVSPL
Sbjct: 721 PFLVSLISSGTR------PEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPL 774
Query: 931 RTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRGTLNFDDVDVD 989
R +KMD L+S SS+S+YAC+GE THAYQSPSKDL IN RLN N RRV LNFD
Sbjct: 775 RQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFD----- 829
Query: 990 VGLVSDSMVANSLYLQNGSAA----ASTCAVLKPEQPD 1023
+VSDS+VA SL NG + A+ + L +PD
Sbjct: 830 --MVSDSVVAGSLGQPNGGSTSLDPAAAFSPLSKRKPD 865
>gi|413925017|gb|AFW64949.1| hypothetical protein ZEAMMB73_472172 [Zea mays]
Length = 839
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/832 (53%), Positives = 574/832 (68%), Gaps = 22/832 (2%)
Query: 163 SKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTC 222
S+ Y++ Y E F +G +S DY FGW LFL LR + FKDLV+C
Sbjct: 28 SRFYRKAYNELF-----SGLITEWEPESSTNTPDYMLFGWHLFLTLRSRSPELFKDLVSC 82
Query: 223 TNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIME 282
+GLV++LAIL++HVP +FR F I SS +K++ KGVDLIASLC Y TSE+ L+++M+
Sbjct: 83 IHGLVAVLAILLVHVPAKFRTFTIEGSSHLIKQTEKGVDLIASLCHNYHTSEECLKEMMD 142
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNAT 342
K++ I ++ K ASECK+ENL+ IDTD L+YF+ L+D S+L +EK N+
Sbjct: 143 KSHKAIEEVFSMKALSASECKTENLDKIDTDRLMYFKGLIDMECFQSNLEKMEK-LCNSN 201
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
+ ELD ++ + +D + + +LS + N+ +K F++LASP KTI + L+ S S
Sbjct: 202 NCEAELDFKLILTNNDYIPCAENLSRDSTNLGCSKCAFETLASPTKTIKNMLTVPSSPLS 261
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
NG G+ + +TP+++AMTTAKWLR VI LP KPS++L++ + SCD+D+T V
Sbjct: 262 PTNG---GSVKIVQMTPITSAMTTAKWLREVISSLPEKPSSKLQQLMSSCDRDLTNAVTE 318
Query: 463 RAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQV 522
R I+LEAIFP+ +R + L AN D +WA+ R++EA KLYYRVLEA+C AE Q
Sbjct: 319 RVSIVLEAIFPTKSSADRGGSLGLNCANAFDTLWADARKMEASKLYYRVLEAICRAELQN 378
Query: 523 LHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFI 582
+ NLT LL+NERFHRC++ACSAELVLATHKTV M+FPAVLE TG+T+FDLSK+IE+F+
Sbjct: 379 SNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPAVLESTGLTSFDLSKIIENFV 438
Query: 583 RHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPS 642
RHEE+LPREL+RHLNSLEE++LESM WEKGSS+YNSL VARP +++EINR GLLA+ MPS
Sbjct: 439 RHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSLIVARPSVASEINRFGLLAESMPS 498
Query: 643 LDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKD 702
LD + N GL P K N D RSPKRPC + RS +VE N T P K
Sbjct: 499 LDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPCNESRSTVVEHNLQTPPPKQ 557
Query: 703 RLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMV 762
+ L +LK+K PLQS FASPT NP GG E CA+ I IFF KI KLAA+RI +
Sbjct: 558 CHMVLTSLKAK--CHPLQSTFASPTVSNPVGGNEKCADVTIQIFFSKILKLAAIRIRNLC 615
Query: 763 ERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYN 822
ER+Q +Q E VY +F+QIL+Q+T+LFFNRHIDQ+ILCC YGVAK+ QL L+FREI+ N
Sbjct: 616 ERIQYMEQT-ERVYNVFKQILDQQTTLFFNRHIDQLILCCLYGVAKVCQLELSFREILNN 674
Query: 823 YRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTA 882
Y+K+ QCKP+VF S+++ S +G HVDIITFYN++FVPA KP LV L +GT
Sbjct: 675 YKKEAQCKPEVFLSIYI--GSRNHNGVLISRHVDIITFYNEVFVPAAKPFLVSLISSGTR 732
Query: 883 MKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHS 942
E N G PGSPK+S FP LPDMSPKKVSA+HNVYVSPLR +KMD L+S S
Sbjct: 733 ------PEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPLRQTKMDLLLSPS 786
Query: 943 SKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRGTLNFDDVDVDVGLV 993
S+S+YAC+GE THAYQSPSKDL IN RLN N RRV LNFD V + + L+
Sbjct: 787 SRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFDMVCLMLTLL 838
>gi|108864449|gb|ABA94066.2| retinoblastoma-related protein 1, putative, expressed [Oryza sativa
Japonica Group]
Length = 873
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/865 (52%), Positives = 589/865 (68%), Gaps = 24/865 (2%)
Query: 23 ATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLY 82
A EARL DLCK L VDE E + E K LLA+ S G+ PE+AE+ FAFVLY
Sbjct: 8 AVEARLADLCKE-LGVDEGVAGEAAAVLEEGKGALLASPS-FGSKSPEDAEKLCFAFVLY 65
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
V +L E + GS+ L IL+ KL DFFKE + + +L + YG+D
Sbjct: 66 CVSKLKET-----KAGSSG--VRLWEILKGCKLKYDDFFKESQRLASRIDQVLGSRYGSD 118
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
WE RLE K+L+ L+ S+ Y + + E FL + Q ++T+ I DY RFGW
Sbjct: 119 WEARLELKQLENLVNLLADASRFYCKAFNELFLSPSTD---QEPGSTTN--IPDYIRFGW 173
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
LLFL LR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ KGVDL
Sbjct: 174 LLFLILRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTEKGVDL 233
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ SLC Y TSED L+++M K+ +I +K ASE K+ NL+ IDTDGL+YF++L+
Sbjct: 234 LPSLCHNYHTSEDRLKEMMGKSYKVIEVFFSRKAINASEFKTVNLDKIDTDGLMYFKDLV 293
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
DD S+L LEK + T +GELD +F+ +D +L + + SG + N +KR F++
Sbjct: 294 DDEIFQSNLEKLEK-LSSTTGCQGELDLEMFLTSNDYVLNAENSSGSSANFGCSKRVFET 352
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
LASP KTI + L+ S +S NG G+ + +TPV++AMTTAKWLR VI LP KPS
Sbjct: 353 LASPTKTIKNMLAAPSSPSSPANG---GSIKIVQMTPVTSAMTTAKWLRDVISSLPDKPS 409
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
++LE FL SCD D+T+DV++R IILEAIFP+ + +R + L AN D WAE R++
Sbjct: 410 SKLEEFLSSCDTDLTSDVVKRVSIILEAIFPTKSI-DRGTSIGLNCANAFDIPWAEARKM 468
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA KLYYRVLEA+C AE+Q + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPA
Sbjct: 469 EASKLYYRVLEAICRAESQNNNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPA 528
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
VLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL VA
Sbjct: 529 VLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSLVVA 588
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
RP LS EIN LGLLA+PMPSLD I + GL P S P N +SPKR
Sbjct: 589 RPSLSTEINSLGLLAEPMPSLDGIVARQSIHPDGLPPTPSKRWPSAGPDGNCYPQSPKRL 648
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
CT+ R+ LVERN+ T P K GL+ LK+K PLQ+ FASPT NP G E CA G
Sbjct: 649 CTESRNSLVERNSQTPPPKQSQTGLSILKAK--YHPLQATFASPTVSNPVSGNEKCAVVG 706
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IFF KI KLAA+RI + ERL+ +++ SVY +F+QIL+Q+T+LFFNRH+DQIILCC
Sbjct: 707 VQIFFSKILKLAAIRIRNLCERLR-HEELTVSVYNIFKQILDQQTALFFNRHVDQIILCC 765
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YGVAK+SQL+LTF+EI+ NY+++PQCKP+VFRS+FV S ++G HVDII FYN
Sbjct: 766 LYGVAKVSQLSLTFKEIVNNYKREPQCKPEVFRSIFV--GSTNRNGGFGSRHVDIIVFYN 823
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNR 887
++FVP VKPLLV L P+ T + R
Sbjct: 824 QVFVPTVKPLLVALMPSSTRPEDKR 848
>gi|242086597|ref|XP_002439131.1| hypothetical protein SORBIDRAFT_09g001110 [Sorghum bicolor]
gi|241944416|gb|EES17561.1| hypothetical protein SORBIDRAFT_09g001110 [Sorghum bicolor]
Length = 870
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/879 (51%), Positives = 588/879 (66%), Gaps = 50/879 (5%)
Query: 159 LSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKD 218
L+ S+ Y+R Y E F +G +S +Y FGW LFL L + FKD
Sbjct: 25 LAEASRFYRRAYNELF-----SGVTTEQEPESSTNTPEYMLFGWYLFLMLHSRSPELFKD 79
Query: 219 LVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
LV+C +GLV++LAIL+IHVPV+FR+F + SS +K++ KG+DLIASLC Y SE+ L+
Sbjct: 80 LVSCIHGLVAVLAILLIHVPVKFRSFTVEGSSHLIKQTEKGMDLIASLCHNYHASEERLK 139
Query: 279 KIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDY 338
++M+K++ I D+ K ASECK+ENL+ I TDGL+YF+ L+D S+L +EK
Sbjct: 140 EMMDKSHKAIEDVFGMKALSASECKTENLDMIGTDGLMYFKGLIDMECFQSNLEKMEK-L 198
Query: 339 DNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTI-------T 391
N+ ++G+LD + + +D + + +LSG + N+ +K F+ LASP KTI +
Sbjct: 199 CNSNSSEGKLDFKSILINNDYIPCAENLSGDSTNLGHSKHVFEILASPTKTIKNMLTVPS 258
Query: 392 SPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
SPLSP S G+ + +TPV++AMTTAKWLR VI LP KPS++L++ L S
Sbjct: 259 SPLSPATS----------GSVKIVQMTPVTSAMTTAKWLREVISSLPEKPSSKLQQLLSS 308
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
CD+D+T V R I+LEAIFP+ + + L AN+ D WAE R++EA KLYYRV
Sbjct: 309 CDRDLTNAVTERVSIVLEAIFPTKSSADGGGSLGLNCANVFDIPWAEARKMEASKLYYRV 368
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 571
LEA+C AE Q + NLT LL NERFHRC++ACSAELVLATHK V M+FPAVLE TG+TA
Sbjct: 369 LEAICRAELQNSNVNNLTPLLLNERFHRCLIACSAELVLATHKPVFMMFPAVLESTGLTA 428
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEIN 631
FDLSK+IE+F+RHEE+LPR+L+RHLNSLEE+LLESMVWEKGSS+YNSL VARP +++EI
Sbjct: 429 FDLSKIIENFVRHEETLPRQLKRHLNSLEEQLLESMVWEKGSSLYNSLIVARPSIASEIK 488
Query: 632 RLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLV 691
LGLLA+PMPSLD + N GL P K + P N D RSPKR C + R+ +V
Sbjct: 489 HLGLLAEPMPSLDDLVARQNIHVEGL-PATPSKKRDAGPDDNADPRSPKRSCNESRNTVV 547
Query: 692 ERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKIN 751
E N T P K ++ +LK+K PL+S FASPT NP GG E CA+ I IFF KI
Sbjct: 548 EHNLLTPPPKHHMVS-TSLKAKCH--PLESTFASPTVSNPVGGNEKCADVAIQIFFSKIL 604
Query: 752 KLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ 811
KLAAVRI + ER+Q ++ E VY +F QIL+Q+T+LFFNRHIDQ+ILCC YGVAK +
Sbjct: 605 KLAAVRIRNLCERVQ-HVELTERVYNVFNQILDQQTTLFFNRHIDQLILCCLYGVAKACK 663
Query: 812 LNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKP 871
+ L+F+E++ YRK+ QCKP+VF+++++ ++ S HV II+FYN +FVPA KP
Sbjct: 664 VELSFKELLNYYRKEAQCKPEVFQNIYIGSRNSNDVLVSR--HVSIISFYNAVFVPAAKP 721
Query: 872 LLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFP-ALPDMSPKKVSATHNVYVSPL 930
LV L +GT E N GP PGSPK S P LPDMSPKKVSA+HNVYVSPL
Sbjct: 722 FLVSLISSGTC------PEDKKNASGPIPGSPKPSPLPNNLPDMSPKKVSASHNVYVSPL 775
Query: 931 RTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTLNFDDVDVD 989
R +KMDAL+S SS+S+YAC+GE THAYQSPSKDL IN RLN S RR+ LNFD
Sbjct: 776 RQTKMDALLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYSGRRINSRLNFD----- 830
Query: 990 VGLVSDSMVANSLYLQNGSA-----AASTCAVLKPEQPD 1023
+VSDS+VA SL NG + AA+ + K +PD
Sbjct: 831 --MVSDSVVAGSLGQPNGGSTSFNPAAAFSPLSKKRKPD 867
>gi|268306348|gb|ACY95295.1| retinoblastoma-related protein [Hordeum vulgare subsp. vulgare]
Length = 885
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/912 (51%), Positives = 593/912 (65%), Gaps = 37/912 (4%)
Query: 23 ATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLY 82
A E DLCK L VDE E L E K + L G+ PE+ ER FAFVLY
Sbjct: 10 AVETHFADLCKE-LGVDEGVASEAAALLEEGKGVFLTP-PLFGSKSPEDVERLCFAFVLY 67
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
V +L G+ +++ S+ L IL KLN DFFK Q L K +L + YG D
Sbjct: 68 CVAKL---KGKGMKEESS--RVRLWKILEGCKLNYNDFFKGSQQLLSKLDHVLRSRYGTD 122
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
WE+ LE K+LQ+ L+ S+ Y + + E FL + Q ++TS D+ FGW
Sbjct: 123 WEDLLELKQLQSLVNLLADASRFYCKAFNELFLSASTG---QEPGSTTSN--PDFFCFGW 177
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
L FLALR + FKDLV+C +GLV+ILAIL+IHVP +FR+F I SS +K++ +GVDL
Sbjct: 178 LFFLALRSKSPELFKDLVSCIHGLVAILAILLIHVPAKFRSFTIEGSSHLIKQTVRGVDL 237
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ASLC Y TSE+ L+++M K + I + K ASECK+E +DGLIYF +L+
Sbjct: 238 LASLCHNYHTSENRLKEMMGKFHKAIEEFFSTKAVRASECKTET-----SDGLIYFRDLL 292
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
D S+ LEK T +GELD +F+ + +++ + + S N++ KR F++
Sbjct: 293 DKECFHSNFEKLEK-LTTTTSWEGELDLEMFLVNNGNIISAENSSRDFSNLSCPKRVFET 351
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
LASP KTI + L+ S +S NG G+ + +TPV++AMTTAKWL VI LP KPS
Sbjct: 352 LASPAKTIKNMLTVPSSPSSPANG---GSVKVVQMTPVTSAMTTAKWLHEVISSLPEKPS 408
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRL 502
+LE+FL SCD D+T+DV +R IILEAIFP+ G + L N D WAE R++
Sbjct: 409 TKLEKFLSSCDTDLTSDVTKRVSIILEAIFPTKPSGHCGGSMGLNCTNAFDIPWAEARKM 468
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA KLYYRVLEA+C AE+ + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPA
Sbjct: 469 EASKLYYRVLEAVCRAESLNTNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPA 528
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
VLE TG+TAFDLSK+IE+F+RHEESLPREL+RHLNSLEE+LLESM WEKGSS+YNSL VA
Sbjct: 529 VLESTGLTAFDLSKIIENFVRHEESLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLIVA 588
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
RP L++EINRLGLLA+ M SLD I NF + L P K P +NGD RSPKR
Sbjct: 589 RPSLASEINRLGLLAESMLSLDDIVARQNFHAEDL-PATPSKKQAADPDENGDSRSPKRL 647
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
C + RS LV++ T K LK+K PLQS FASPT NP G E CAE G
Sbjct: 648 CIESRSTLVDQIPQTPSAKQSY----TLKAKWC--PLQSTFASPTVSNPVGRNEKCAEVG 701
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
++IFF KI KLAA+RI + ERL +Q E VY +F+QIL+Q+T+LFFNRHIDQ+ILC
Sbjct: 702 VHIFFSKILKLAAIRIRNLCERLGHVEQT-ERVYNIFKQILDQQTALFFNRHIDQLILCS 760
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YGVAK+SQL LTF+EI+ NY+++ QC P+VFRSVFV + +G HVDII FYN
Sbjct: 761 LYGVAKVSQLTLTFKEIVNNYKREQQCMPEVFRSVFV--VNTDHNGGLGSRHVDIIIFYN 818
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
++FVPAVKP LV L P+G + NHN+ PGSPK S F LPDMSPKKVS++
Sbjct: 819 EVFVPAVKPFLVALIPSGAHPDNKK----NHNSQ--IPGSPKSSPFSNLPDMSPKKVSSS 872
Query: 923 HNVYVSPLRTSK 934
HNVY+SPLR +K
Sbjct: 873 HNVYISPLRQTK 884
>gi|343960568|dbj|BAK64055.1| retinoblastoma-related protein;1 [Physcomitrella patens subsp.
patens]
Length = 985
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/915 (48%), Positives = 591/915 (64%), Gaps = 49/915 (5%)
Query: 9 TASNNSESNAGDN-----DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
T ++++S G N + EAR C+ GL + + T +E ++LFR +KHLL NI
Sbjct: 66 TNGSDTKSRTGSNVEKFVEVAEARFRKRCEVGLGLGDGTTQEAMRLFRASKHLLKTNIGT 125
Query: 64 IGNGMPEEAERFWFAFVLYLVRRLSE---KNGENLQQGSNDNEFNLCHILRVMKLNIVDF 120
IG G EE ER W A VLY+VRRL G+ ++ G+ F +LR +L++V+F
Sbjct: 126 IGTGTAEETERLWSACVLYVVRRLGTGVCAGGDRVENGAPAG-FTFSQLLRETRLSVVEF 184
Query: 121 FKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPS-D 178
FKELPQFL K+GP L ++YG DWE RL+ KE+QANFVHL +L YKRIY+ F LP
Sbjct: 185 FKELPQFLAKAGPTLKSVYGEDWEKRLQVKEVQANFVHLMVLYNYYKRIYQHLFVLPEKQ 244
Query: 179 ANGDKQSAAASTSGYISDYH-RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHV 237
A G + H RFGW+LFLALR H + F DLVTCTNGL++++ +LIIH+
Sbjct: 245 ARGGNGLCLGGGGDAATPVHMRFGWMLFLALRTHVLNHFADLVTCTNGLLAVIIVLIIHI 304
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPC 297
P+ +R F+ D +F K+S +GV+L+ SLC +Y+ SE+D+ ++ K N +I ++
Sbjct: 305 PLTWRRFSFDDKLKFAKRSAEGVNLVGSLCYLYNASEEDVAGMVAKLNEMIKVLIGSPAT 364
Query: 298 EASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED 357
+ ++ DG+ YFE LM+ +SS+L ILE+DYD R++GELDER+FIN +
Sbjct: 365 GMDGGDIPQIGGMNPDGVTYFEGLMEVEQISSNLVILEEDYDGWYRSRGELDERMFINGE 424
Query: 358 DSLLGSGSLSGGAVNITGAKRKFDSLASP-----VKTITSPLSPHRSSASHP---NGIAG 409
DSL+G+ S S ++ G KRK D++ S V + SP SP S S P G+AG
Sbjct: 425 DSLIGAVSSSS-TTSVCGVKRKRDAVTSAGQGRAVSSGASPSSPCGSPESSPAVMGGVAG 483
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
G+T K TPVS MTTAKWLRTVI PL ++PS ELER+L+ ++++ +++ RA++IL
Sbjct: 484 GSTCKPPPTPVSITMTTAKWLRTVIAPLSAEPSPELERYLRVFERNIASEMKVRANVILG 543
Query: 470 AIFPSS---GLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAK 526
IF + G GE A D++W +QRRLEALKLYY+VL AMCTAE+ L ++
Sbjct: 544 GIFEARKWRGAGE---------AGTSDSMWGDQRRLEALKLYYKVLGAMCTAESHRLRSE 594
Query: 527 NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEE 586
+L L NERFHRCMLACSAELVLA+HKTVTM FPAVLE GITAFDLSKVIE F+RHEE
Sbjct: 595 HL-PFLPNERFHRCMLACSAELVLASHKTVTMTFPAVLEPAGITAFDLSKVIEGFVRHEE 653
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAI 646
+LPREL+RHLNS+EERLLESM WEKGSSM+NSL +A+ L+ EINRL L+A+PMP+LD
Sbjct: 654 TLPRELKRHLNSIEERLLESMAWEKGSSMFNSLAIAKANLAPEINRLKLMAEPMPALDTS 713
Query: 647 ATH----INFSSGGLS------PVHSLHKHETSPGQNGDIRSPK--RPCTDYRSVLVERN 694
++ + G + P SP + G + + K T + E
Sbjct: 714 KAQQRSPVDTADGRIGGSKVDDPAGESKGGAASPPRQGSMTAVKGNAGATGGSAEQGESA 773
Query: 695 NFTSPVK--DRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINK 752
+F SP + ++ + PPL AFASP RPNP GGETCAET IN+FF K+ K
Sbjct: 774 SFMSPARGPSAFTAFSSPQKSRAMPPLLLAFASPQRPNPQAGGETCAETCINVFFQKVLK 833
Query: 753 LAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL 812
LAAVRI + ERLQ SQQ+ E V LN T LFFNRHIDQIILCC YG+ K+S++
Sbjct: 834 LAAVRIRNLCERLQQSQQVVERVNRALHHALNHETGLFFNRHIDQIILCCVYGICKVSKV 893
Query: 813 NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPL 872
N+TFR+IIY+YRKQPQCKP VFR+V +D + +SG++ Q+ DII FYN++FVP+ K
Sbjct: 894 NVTFRDIIYHYRKQPQCKPYVFRNVLLDGSVVWRSGKAGQETGDIIRFYNEVFVPSTKSF 953
Query: 873 LVELG-PAGTAMKTN 886
L+++G AG A+ ++
Sbjct: 954 LLQVGSSAGVAVPSS 968
>gi|168035668|ref|XP_001770331.1| Rb -related protein [Physcomitrella patens subsp. patens]
gi|254789788|sp|A9SVH7.1|RBR_PHYPA RecName: Full=Retinoblastoma-related protein
gi|162678362|gb|EDQ64821.1| Rb -related protein [Physcomitrella patens subsp. patens]
Length = 1116
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/1070 (44%), Positives = 631/1070 (58%), Gaps = 158/1070 (14%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
+ E R + C+ GL +D+ T ++ ++LF+E+K LLLANI +IG E+ ER W VL
Sbjct: 85 EGLEGRFREHCEVGLCLDDPTLQQALRLFKESKPLLLANIDSIGTSTVEDTERLWGGCVL 144
Query: 82 YLVRRLS-EKNGENLQQGSNDNEFNLCHILRVMKLN------------IVDFFKELPQFL 128
Y+V+ LS + + SN F L ++R K+ I + ELP FL
Sbjct: 145 YVVKALSCGATVDGDKSESNAVGFTLSQLMRQTKIRHARELDMISICAITECLLELPHFL 204
Query: 129 VKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAA 188
VK GPI+ +YG +WE RL+ KE+QANFVHL+ L +KR+Y++FFL D + S +
Sbjct: 205 VKVGPIVKQMYGDEWEKRLQVKEVQANFVHLTALFTYFKRVYQDFFLSPDTFTNIVSRSL 264
Query: 189 ST---SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSIL--------------- 230
S ++S + +FGW+LFLALR+H +F DLVTCTN L++++
Sbjct: 265 SGVRDEHHVSVHMQFGWMLFLALRMHVIQQFSDLVTCTNALMAVMFCEPLSGAWSKSNLG 324
Query: 231 --------AILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIME 282
ILI+H+P R F++ D RF K+S++GVDL+ASLC+ Y +++D+ ++E
Sbjct: 325 FCFFVFMQVILILHMPPDLRKFSLQDPVRFAKRSSEGVDLVASLCATYYAADEDVSSLLE 384
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNAT 342
K N I+ + K P + GL Y E LMD SL+++L +LEKDY+++
Sbjct: 385 KANATISKLFGK-PMKG--------------GLAYLEGLMDKKSLAANLRMLEKDYEDSY 429
Query: 343 RNKGELDERVFINEDDSLLGSGS-----LSGGAV---------------------NITGA 376
+++G LDER+FIN +D LLG+ S SG V N+
Sbjct: 430 QSRGGLDERMFINGEDGLLGTLSNESPRFSGSKVLFLVPSLHVDECKVKSSFPLTNVPVY 489
Query: 377 KRKFDSLASPVK---------TITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTA 427
+RKFD +ASPV+ + SP S H + TPV+ MTTA
Sbjct: 490 QRKFDIMASPVRFGAFSMGAAPSSPAASPWSSPVKHMGTQGSSGGKRPPSTPVTITMTTA 549
Query: 428 KWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQ 487
KWLRTVI PL ++PS EL+ F +SCD+D++ DV RAH++L+ IF + ER G Q
Sbjct: 550 KWLRTVITPLAAEPSVELQLFFRSCDRDISADVKNRAHVLLDLIFSA----ER--GGGWQ 603
Query: 488 G-ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSA 546
G A LMD +W EQR+LEA+KLYY+VL AMC +E Q LH NLTSLL+NERFHRCM+ACSA
Sbjct: 604 GVAGLMD-VWPEQRKLEAIKLYYKVLGAMCRSEEQRLHTHNLTSLLSNERFHRCMIACSA 662
Query: 547 ELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 606
ELVLATHKTVTM FPAVLE GITAFDLSKVIE F+RHEE+LPREL+RHLN++EER+LES
Sbjct: 663 ELVLATHKTVTMGFPAVLEPAGITAFDLSKVIEYFVRHEETLPRELKRHLNTIEERILES 722
Query: 607 MVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHI----------NFSSGG 656
M WEKGSSMYNSL VARP L+ EINRL LLADPMP+L+ +AT + S G
Sbjct: 723 MAWEKGSSMYNSLIVARPSLANEINRLCLLADPMPALENLATQVRPATVMHRIPGLSKSG 782
Query: 657 LSPVHSLHKH----ETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKS 712
S + H +SP QNG S F SPVKDR + S
Sbjct: 783 HSGEVACAAHTPTSASSPPQNGSSTS--------------EAGFLSPVKDRPSAFSAFSS 828
Query: 713 ---KPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ 769
L PLQSAFASP RP+P GGGETCA+T IN+FF K LAAVRI + ER+ Q
Sbjct: 829 PMRNRLRAPLQSAFASPQRPSPLGGGETCADTVINVFFQKALVLAAVRIRTVCERIGQPQ 888
Query: 770 QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLT-FREIIYNYRKQPQ 828
+ E VY +FQ L+ TSLFFNRHIDQ++LC YGV K +++ FR +YR
Sbjct: 889 HLIERVYKVFQHALHHETSLFFNRHIDQLVLCTIYGVCKKPSYSVSGFR----SYRH--S 942
Query: 829 CKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRV 888
C + ++ W + +++G E DII FYN +FV K LV++ ++M++ R
Sbjct: 943 CDMAMRMTL---WINFQKTGGLESG--DIIKFYNDVFVHVTKKFLVQVD-TNSSMRSPRK 996
Query: 889 SEVNHNND-----------------GPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLR 931
+ + ND G PGSP S+F PD+SPKKVSA HNV+VSPLR
Sbjct: 997 AHGSDGNDGTISKLLKDEMEVIIIKGEAPGSPVASIFSTFPDISPKKVSALHNVFVSPLR 1056
Query: 932 TSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
+SK+D L+S +++ YACVGEST YQSPSKDLT IN+RLN G L
Sbjct: 1057 SSKVDKLMSPRTRTLYACVGESTRDYQSPSKDLTAINNRLNKRFIAHGDL 1106
>gi|302805037|ref|XP_002984270.1| hypothetical protein SELMODRAFT_180795 [Selaginella moellendorffii]
gi|300148119|gb|EFJ14780.1| hypothetical protein SELMODRAFT_180795 [Selaginella moellendorffii]
Length = 986
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/1018 (44%), Positives = 617/1018 (60%), Gaps = 135/1018 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANI--SAIGNGMPEEAERFWFAFVLY 82
EAR + C+ LS+DE + ++ ++L+ L+A + S++ G +EAER W A +LY
Sbjct: 32 EARFREFCETRLSLDEISLEKALRLYG-----LVAPLRDSSLLGGSVDEAERIWMAGILY 86
Query: 83 LVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
+V++L + F L +LRV L++V+FF+E+ QFL K P L ++YGA+
Sbjct: 87 VVKKLDRREVPI---------FTLTQVLRVTNLSVVEFFREITQFLKKCAPTLKSVYGAE 137
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
++ L+AKE QA FVHL +L YKR + ++F P+++ D+ IS + RFGW
Sbjct: 138 FQGDLQAKEDQATFVHLMVLFNYYKRTFPQYFEPAESESDE----------ISIHQRFGW 187
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDL 262
LFLA R+H RF DLVTCTN L+ ++A++I+H+P R++++ + S F + GV L
Sbjct: 188 FLFLAARVHVLGRFPDLVTCTNALLGVVAVMIVHMPASLRSYSLENKSLF-RTDADGVKL 246
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKS-ENLENIDTDGLIYFENL 321
I+SLCS+ + E D+ +++ +I+ I P S+C S NL+ +DGL+YFE L
Sbjct: 247 ISSLCSVGEADEKDVMSVLKNIQDMISSIFPNLP-STSDCSSVSNLQGFSSDGLVYFEGL 305
Query: 322 MDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFD 381
M+D+ ++++L LEK Y+++ GE +F +LL R+ D
Sbjct: 306 MEDNMIAANLLTLEKQYESS----GEEGYELFAEPSLTLL---------------HREKD 346
Query: 382 SLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV-TPVSTAMTTAKWLRTVICPLPSK 440
+ S ++ S S++S + +A +KM TPVS MTTAKWLRTVI PLPS+
Sbjct: 347 AQVSSLQQTLS------STSSPRSSLAMITAAKMPPPTPVSVTMTTAKWLRTVIAPLPSE 400
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT----GSLQGANLMDNIW 496
PS EL +L+SCD+D+T +V RA +ILEAIFP G T GSL+ W
Sbjct: 401 PSTELLEYLRSCDRDITEEVTHRAKVILEAIFPIYSPGSWKATLHSSGSLE--------W 452
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A QRR EA KLYYRVL A+C AE+ L +KNLTS+LT+E+FHRCMLACS ELVLATHKTV
Sbjct: 453 AVQRRSEASKLYYRVLTALCHAESLRLQSKNLTSVLTSEKFHRCMLACSGELVLATHKTV 512
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
+ FPAVL TGITAFD+SKVIESF+RHEE+LPREL+RHLNS+EERLLESM WEKGSSMY
Sbjct: 513 ILSFPAVLGPTGITAFDMSKVIESFVRHEETLPRELKRHLNSIEERLLESMAWEKGSSMY 572
Query: 617 NSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDI 676
NSL VARP EI RL L+A+PMPSL+ +L S G++
Sbjct: 573 NSLIVARPRFGDEIRRLELMAEPMPSLE-----------------TLSSRRESKGEDMPD 615
Query: 677 RSPKRPCTDYRSVLVERNNFT---SPVKDR---LLGLNNLKSKPLPPPLQSAFA------ 724
R P +L T SPVK+R N+ K LQS FA
Sbjct: 616 REP---------LLSGEQTLTCIPSPVKERPSAFSAFNSGSGKRNLFHLQSVFARYMKGL 666
Query: 725 -----------SPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRE 773
SP +PNP GETCAE +N+FF K+ KLAA RI + ERL + E
Sbjct: 667 LFGRCTDNSSFSPQKPNPHASGETCAEAVMNVFFQKVLKLAASRIKVLCERLSQPSHVVE 726
Query: 774 SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQV 833
++ +F+ LN RT++FFNRHIDQIILC YGV K+ +LN+TFR+II+ YRKQPQ + V
Sbjct: 727 QIFQVFEYALN-RTTIFFNRHIDQIILCSMYGVCKVMKLNVTFRDIIFQYRKQPQSRNHV 785
Query: 834 FRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH 893
FR+V+++ ++ GR+ D DII FYN+I+VPA K L+ + +M + + +
Sbjct: 786 FRNVYLE----QRRGRT--DMGDIIKFYNEIYVPATKAFLMNIAARPASMVAGKGTATDE 839
Query: 894 NNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGES 953
P P+ SVFPA+PDMSP+KVSA HNV+VSPLR +K++ ++S S+S YACVGES
Sbjct: 840 APSSP----PRPSVFPAIPDMSPRKVSARHNVFVSPLRNTKVENIMSPHSRSLYACVGES 895
Query: 954 THAYQSPSKDLTDINHRLN-SNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAA 1010
THAYQSPSKDLT IN RLN SN R L F + L+SDS V +L N AA
Sbjct: 896 THAYQSPSKDLTVINCRLNLSNGR---RLEFQ----EPSLMSDSFVTGALSNTNTDAA 946
>gi|302781328|ref|XP_002972438.1| hypothetical protein SELMODRAFT_97707 [Selaginella moellendorffii]
gi|300159905|gb|EFJ26524.1| hypothetical protein SELMODRAFT_97707 [Selaginella moellendorffii]
Length = 839
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/914 (46%), Positives = 576/914 (63%), Gaps = 90/914 (9%)
Query: 70 EEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLV 129
+EAER W A +LY+V++L + F L +LRV L++V+FF+E+ QFL
Sbjct: 1 DEAERIWMAGILYVVKKLDRREVPI---------FTLTQVLRVTNLSVVEFFREITQFLK 51
Query: 130 KSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAS 189
K P L ++YGA+++ L+AKE QA FVHL +L YKR + ++F P+++ D+
Sbjct: 52 KCAPTLKSVYGAEFQGDLQAKEDQATFVHLMVLFNYYKRTFPQYFEPAESESDE------ 105
Query: 190 TSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS 249
IS + RFGW LFLA R+H RF DLVTCTN L+ ++A++I+H+P R++++ +
Sbjct: 106 ----ISIHQRFGWFLFLAARVHVLGRFPDLVTCTNALLGVVAVMIVHMPSSLRSYSLENK 161
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLEN 309
S F K+ GV LI+SLCS+ + E D+ +++ +I+ I P S+C S
Sbjct: 162 SLFPKRDADGVKLISSLCSVGEADEKDVMSVLKNIQDMISSIFPNLP-STSDCSSGFDHL 220
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 369
DGL+YFE LM+D+ ++++L LEK Y+++ GE +F +LL
Sbjct: 221 FFPDGLVYFEGLMEDNMIAANLLTLEKQYESS----GEEGYELFAEPSLTLL-------- 268
Query: 370 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV-TPVSTAMTTAK 428
R+ D+ S ++ S S++S + +A +KM TPVS MTTAK
Sbjct: 269 -------HREKDAQVSSLQQTLS------STSSPRSSLAMITAAKMPPPTPVSVTMTTAK 315
Query: 429 WLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT----G 484
WLRTVI PLPS+PS EL +L+SCD+D+T +V RA +ILEAIFP G T G
Sbjct: 316 WLRTVIAPLPSEPSTELLEYLRSCDRDITEEVTHRAKVILEAIFPIYSPGSWKATLHSSG 375
Query: 485 SLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLAC 544
SL+ WA QRR EA KLYYRVL A+C AE+ L +KNLTS+LT+E+FHRCMLAC
Sbjct: 376 SLE--------WAVQRRSEASKLYYRVLTALCHAESLRLQSKNLTSVLTSEKFHRCMLAC 427
Query: 545 SAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLL 604
S ELVLATHKTV + FPAVL TGITAFD+SKVIESF+RHEE+LPREL+RHLNS+EERLL
Sbjct: 428 SGELVLATHKTVILSFPAVLGPTGITAFDMSKVIESFVRHEETLPRELKRHLNSIEERLL 487
Query: 605 ESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
ESM WEKGSSMYNSL VARP EI RL L+A+PMPSL+ +++
Sbjct: 488 ESMAWEKGSSMYNSLIVARPRFGDEIRRLELMAEPMPSLETLSSRQE------------S 535
Query: 665 KHETSPGQNGDIRSPKRPCTDYRSVLVERNNFT---SPVKDR---LLGLNNLKSKPLPPP 718
K E PG+ +R R ++ +L T SPVK+R N+ K
Sbjct: 536 KGEDMPGEFYLLR---RIHVNFIPLLSGEQTLTCLPSPVKERPSAFSAFNSGSGKRNLFH 592
Query: 719 LQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCL 778
LQS FASP +PNP GETCAE +N+FF K+ KLAA RI + ERL + E ++ +
Sbjct: 593 LQSVFASPQKPNPHASGETCAEAVMNVFFQKVLKLAASRIKVLCERLSQPSHVVEQIFQV 652
Query: 779 FQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF 838
F+ LN RT++FFNRHIDQIILC YGV K+S LN+TFR+II+ YRKQPQ + VFR+V+
Sbjct: 653 FEYALN-RTTIFFNRHIDQIILCSMYGVCKVSILNVTFRDIIFQYRKQPQSRNHVFRNVY 711
Query: 839 VDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
++ ++ GR+ D DII FYN+I+VPA K L+ + +M + + + P
Sbjct: 712 LE----QRRGRT--DMGDIIKFYNEIYVPATKAFLMNIAARPASMVAGKGTATDEAPSSP 765
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
P+ S+FPA+PDMSP+KVSA HNV+VSPLR +K++ ++S S+S YACVGESTHAYQ
Sbjct: 766 ----PRASMFPAIPDMSPRKVSARHNVFVSPLRNTKVENIMSPHSRSLYACVGESTHAYQ 821
Query: 959 SPSKDLTDINHRLN 972
SPSKDLT IN RLN
Sbjct: 822 SPSKDLTVINCRLN 835
>gi|1617474|emb|CAA67422.1| Rb1 protein [Zea mays]
Length = 683
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/701 (54%), Positives = 480/701 (68%), Gaps = 38/701 (5%)
Query: 327 LSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASP 386
S+L +EK N+ KGELD + + +D + + +G + N+ +K F++LASP
Sbjct: 4 FQSNLEKMEK-LCNSNSCKGELDFKSILINNDYIPYDENSTGDSTNLGHSKCAFETLASP 62
Query: 387 VKTI-------TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPS 439
KTI +SPLSP GG+ + +TPV++AMTTAKWLR VI LP
Sbjct: 63 TKTIKNMLTVPSSPLSP----------ATGGSVKIVQMTPVTSAMTTAKWLREVISSLPD 112
Query: 440 KPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ 499
KPS++L++FL SCD+D+T V R I+LEAIFP+ R V+ L AN D WAE
Sbjct: 113 KPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSANRGVSLGLNCANAFDIPWAEA 172
Query: 500 RRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML 559
R++EA KLYYRVLEA+C AE Q + NLT LL+NERFHRC++ACSA+LVLATHKTV M+
Sbjct: 173 RKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSADLVLATHKTVIMM 232
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FPAVLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLESM WEKGSS+YNSL
Sbjct: 233 FPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 292
Query: 620 TVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSP 679
VARP +++EINRLGLLA+PMPSLD + + N GL P K P N D RSP
Sbjct: 293 IVARPSVASEINRLGLLAEPMPSLDDLVSRQNVRIEGL-PATPSKKRAAGPDDNADPRSP 351
Query: 680 KRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA 739
KR C + R+ +VERN T P K + +LK+K PLQS FASPT NP GG E CA
Sbjct: 352 KRSCNESRNTVVERNLQTPPPKQSHMVSTSLKAKCH--PLQSTFASPTVCNPVGGNEKCA 409
Query: 740 ETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQII 799
+ I+IFF KI KLAA+RI + ER+Q +Q E VY +F+QIL Q+T+LFFNRHIDQ+I
Sbjct: 410 DVTIHIFFSKILKLAAIRIRNLCERVQCVEQT-ERVYNVFKQILEQQTTLFFNRHIDQLI 468
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
LCC YGVAK+ QL LTFREI+ NY+++ QCKP+VF S+++ S ++G HV IIT
Sbjct: 469 LCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYI--GSTNRNGVLVSRHVGIIT 526
Query: 860 FYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV 919
FYN++FVPA KP LV L +GT E N G PGSPK S FP LPDMSPKKV
Sbjct: 527 FYNEVFVPAAKPFLVSLISSGTH------PEDKKNASGQIPGSPKPSPFPNLPDMSPKKV 580
Query: 920 SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVR 978
SA+HNVYVSPLR +K+D L+S SS+S+YAC+GE THAYQSPSKDL IN RLN N R+V
Sbjct: 581 SASHNVYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRKVN 640
Query: 979 GTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
LNFD +VSDS+VA SL NG + + A P
Sbjct: 641 SRLNFD-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 674
>gi|414876195|tpg|DAA53326.1| TPA: hypothetical protein ZEAMMB73_924087 [Zea mays]
Length = 505
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/512 (68%), Positives = 409/512 (79%), Gaps = 24/512 (4%)
Query: 502 LEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFP 561
+EALKLYYRVLE+MC AE+Q+L NLT LL+NERFHRCM+ACSAELVLATHKTVT++FP
Sbjct: 1 MEALKLYYRVLESMCRAESQILSGNNLTLLLSNERFHRCMIACSAELVLATHKTVTLMFP 60
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
AVLE+TGITAFDLSKVIE F+RHE++LPREL+RHLNSLEERLLESM WEKGSSMYNSL V
Sbjct: 61 AVLEKTGITAFDLSKVIEGFVRHEDTLPRELKRHLNSLEERLLESMSWEKGSSMYNSLIV 120
Query: 622 ARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKR 681
ARPVLS EINRLGLLA+PMPSLDAIA H N S GGL P+ K E ++ +IRSPKR
Sbjct: 121 ARPVLSIEINRLGLLAEPMPSLDAIAAHHNISMGGLPPL-PFQKQERLQDKD-EIRSPKR 178
Query: 682 PCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAET 741
CT+ R V V+ N+F S VKD + LK LPPPLQSAFASPTRPNP GGETCAET
Sbjct: 179 ACTERRHVPVDSNSFRSQVKDSI----KLK---LPPPLQSAFASPTRPNPAAGGETCAET 231
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
GI +FF KI+KLAA+RI ++ ERLQLSQQ+ E VY L QQIL+Q+T LFFNRHIDQIILC
Sbjct: 232 GIAVFFSKISKLAAIRIRSLCERLQLSQQVLERVYSLVQQILSQQTGLFFNRHIDQIILC 291
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YGVAKISQL L+F+EI++ YRKQPQCKPQVFRSV+V W +G++ +DHVDIITFY
Sbjct: 292 SIYGVAKISQLQLSFKEIVFGYRKQPQCKPQVFRSVYVHWPPTSHNGKTGEDHVDIITFY 351
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N++F+PAVKPLLVE+GP + + GP P SP+++ FP LPDMSPKKVSA
Sbjct: 352 NEVFIPAVKPLLVEVGPGASPKR-------KEEGKGPYPESPRLARFPNLPDMSPKKVSA 404
Query: 922 THNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
THNVYVSPLR+SKMD L+S S KSYYACVGEST+A+QSPSKDL IN+RLNS ++V G L
Sbjct: 405 THNVYVSPLRSSKMDTLLSPSPKSYYACVGESTYAFQSPSKDLKAINNRLNSWKKVSGRL 464
Query: 982 NFDDVDVDVGLVSDSMVANSLY-LQNGSAAAS 1012
NFD +VSD +VA+SL +QN AA+
Sbjct: 465 NFD-------IVSDLVVASSLNGVQNAKPAAT 489
>gi|2352799|gb|AAB69651.1| retinoblastoma-related protein 2b [Zea mays]
Length = 584
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/604 (57%), Positives = 430/604 (71%), Gaps = 23/604 (3%)
Query: 391 TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLK 450
+SPLSP GG+ + +TP+++AMTTAKWLR VI LP KPS++L++ +
Sbjct: 2 SSPLSPTN----------GGSVKIVQMTPITSAMTTAKWLREVISSLPEKPSSKLQQLMS 51
Query: 451 SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYR 510
SCD+D+T V R I+LEAIFP+ +R + L AN D +WA+ R++EA KLYYR
Sbjct: 52 SCDRDLTNAVTERVSIVLEAIFPTKSSADRGGSLGLNCANAFDTLWADARKMEASKLYYR 111
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGIT 570
VLEA+C AE Q + NLT LL+NERFHRC++ACSAELVLATHKTV M+FPAVLE TG+T
Sbjct: 112 VLEAICRAELQNSNVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPAVLESTGLT 171
Query: 571 AFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEI 630
+FDLSK+IE+F+RHEE+LPREL+RHLNSLEE++LESM WEKGSS+YNSL VARP +++EI
Sbjct: 172 SFDLSKIIENFVRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSLIVARPSVASEI 231
Query: 631 NRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVL 690
NR GLLA+ MPSLD + N GL P K N D RSPKRPC + RS +
Sbjct: 232 NRFGLLAESMPSLDDLVARQNIHIEGL-PATPSKKRAAGRDDNADPRSPKRPCNESRSTV 290
Query: 691 VERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKI 750
VE N T P K + L +LK+K PLQS FASPT NP GG E CA+ I IFF KI
Sbjct: 291 VEHNLQTPPPKQCHMVLTSLKAK--CHPLQSTFASPTVSNPVGGNEKCADVTIQIFFSKI 348
Query: 751 NKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKIS 810
KLAA+RI + ER+Q +Q E VY +F+QIL+Q+T+LFFNRH+ Q+ILCC YGVAK+
Sbjct: 349 LKLAAIRIRNLCERIQYMEQT-ERVYNVFKQILDQQTTLFFNRHMHQLILCCLYGVAKVC 407
Query: 811 QLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVK 870
QL L+FREI+ NY+K+ QCKP+VF S+++ S +G HVDIITFYN++FVPA K
Sbjct: 408 QLELSFREILNNYKKEAQCKPEVFLSIYI--GSRNHNGVLISRHVDIITFYNEVFVPAAK 465
Query: 871 PLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL 930
P LV L +GT E N G PGSPK+S FP LPDMSPKKVSA+HNVYVSPL
Sbjct: 466 PFLVSLISSGTR------PEDKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPL 519
Query: 931 RTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN-RRVRGTLNFDDVDVD 989
R +KMD L+S SS+S+YAC+GE THAYQSPSKDL IN RLN N RRV LNFD V +
Sbjct: 520 RQTKMDLLLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFDMVCLM 579
Query: 990 VGLV 993
+ L+
Sbjct: 580 LTLL 583
>gi|225451657|ref|XP_002276265.1| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
Length = 683
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/640 (55%), Positives = 438/640 (68%), Gaps = 54/640 (8%)
Query: 366 LSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
SG +NI G KRKF+++ SP T TS LSP T
Sbjct: 91 FSGDTMNICGYKRKFEAIVSPADT-TSQLSP---------------------------CT 122
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGS 485
A+WL+TVIC LP+KPSAELERF+ SCD +VT V+ RA IIL AIFP G RC++
Sbjct: 123 PAQWLQTVICSLPAKPSAELERFMSSCDGNVTDKVICRASIILAAIFPRGCNGNRCMSSG 182
Query: 486 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 545
L ++LM++ W EQR+ EALKLYY+VLE++C +EAQ L +NLT LLTNERFHRCMLACS
Sbjct: 183 LHNSSLMNSGWIEQRQEEALKLYYKVLESICESEAQKLQGRNLTQLLTNERFHRCMLACS 242
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
AELV A H V MLFP VLER GITAFDLS+V ESFI+HE SLPREL+R+LNS+EE++LE
Sbjct: 243 AELVSAAHMGVRMLFPRVLERIGITAFDLSRVTESFIKHEGSLPRELKRYLNSMEEQMLE 302
Query: 606 SMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHK 665
SMVW KGSS+YNSL VARP L+ EI RLGLLA PMPSLDAIA S GGL
Sbjct: 303 SMVWGKGSSLYNSLIVARPSLAEEIRRLGLLAKPMPSLDAIAADNLLSYGGLP------- 355
Query: 666 HETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNN--LKSKPLPPPLQSAF 723
PGQNG+ RS ++ ++ N+ P+K+ LN+ + P PPL SAF
Sbjct: 356 --HPPGQNGNARSSEKVSSEL------HNSSALPMKEHSPALNDQKPRKPPPSPPLLSAF 407
Query: 724 ASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQIL 783
ASPT+PNPGG G TC +TGI + F K+ KLAAVRIN + RL+ Q IRE VY LF +IL
Sbjct: 408 ASPTQPNPGGRGSTCLDTGIKLLFEKVAKLAAVRINHLTLRLKPLQPIREIVYGLFHRIL 467
Query: 784 NQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS 843
NQ+T+L FNRH+DQIILCCFY + K S+L LTF+EI +Y KQPQ PQV VFV+ +
Sbjct: 468 NQKTALCFNRHVDQIILCCFYIIVKDSKLELTFKEIKDSYVKQPQHGPQVVSHVFVNRSP 527
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP 903
A +G++ +DH+DI+ FYN+IF+ AVKPLLVE+ PA + + E +N D CPGSP
Sbjct: 528 AHGNGKNREDHIDIVAFYNEIFLWAVKPLLVEVRPAKVSDQAP--DEAANNADDECPGSP 585
Query: 904 KVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKD 963
++S FP++PD+SPKKVS +HNVY+S L+ SK +ALIS +KSYYAC GEST AYQSPSKD
Sbjct: 586 RISPFPSIPDLSPKKVSPSHNVYLSSLQPSKKEALISRGAKSYYACFGESTRAYQSPSKD 645
Query: 964 LTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLY 1003
LT IN+ L S ++R L DV VS S VA +L+
Sbjct: 646 LTTINNCLRSRPKLRRRL-------DVEFVSHSEVARALF 678
>gi|296082246|emb|CBI21251.3| unnamed protein product [Vitis vinifera]
Length = 588
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/635 (55%), Positives = 436/635 (68%), Gaps = 54/635 (8%)
Query: 371 VNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWL 430
+NI G KRKF+++ SP T TS LSP T A+WL
Sbjct: 1 MNICGYKRKFEAIVSPADT-TSQLSP---------------------------CTPAQWL 32
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGAN 490
+TVIC LP+KPSAELERF+ SCD +VT V+ RA IIL AIFP G RC++ L ++
Sbjct: 33 QTVICSLPAKPSAELERFMSSCDGNVTDKVICRASIILAAIFPRGCNGNRCMSSGLHNSS 92
Query: 491 LMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVL 550
LM++ W EQR+ EALKLYY+VLE++C +EAQ L +NLT LLTNERFHRCMLACSAELV
Sbjct: 93 LMNSGWIEQRQEEALKLYYKVLESICESEAQKLQGRNLTQLLTNERFHRCMLACSAELVS 152
Query: 551 ATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWE 610
A H V MLFP VLER GITAFDLS+V ESFI+HE SLPREL+R+LNS+EE++LESMVW
Sbjct: 153 AAHMGVRMLFPRVLERIGITAFDLSRVTESFIKHEGSLPRELKRYLNSMEEQMLESMVWG 212
Query: 611 KGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSP 670
KGSS+YNSL VARP L+ EI RLGLLA PMPSLDAIA S GGL P
Sbjct: 213 KGSSLYNSLIVARPSLAEEIRRLGLLAKPMPSLDAIAADNLLSYGGLP---------HPP 263
Query: 671 GQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNN--LKSKPLPPPLQSAFASPTR 728
GQNG+ RS ++ ++ N+ P+K+ LN+ + P PPL SAFASPT+
Sbjct: 264 GQNGNARSSEKVSSEL------HNSSALPMKEHSPALNDQKPRKPPPSPPLLSAFASPTQ 317
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
PNPGG G TC +TGI + F K+ KLAAVRIN + RL+ Q IRE VY LF +ILNQ+T+
Sbjct: 318 PNPGGRGSTCLDTGIKLLFEKVAKLAAVRINHLTLRLKPLQPIREIVYGLFHRILNQKTA 377
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L FNRH+DQIILCCFY + K S+L LTF+EI +Y KQPQ PQV VFV+ + A +G
Sbjct: 378 LCFNRHVDQIILCCFYIIVKDSKLELTFKEIKDSYVKQPQHGPQVVSHVFVNRSPAHGNG 437
Query: 849 RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVF 908
++ +DH+DI+ FYN+IF+ AVKPLLVE+ PA + + E +N D CPGSP++S F
Sbjct: 438 KNREDHIDIVAFYNEIFLWAVKPLLVEVRPAKVSDQAP--DEAANNADDECPGSPRISPF 495
Query: 909 PALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
P++PD+SPKKVS +HNVY+S L+ SK +ALIS +KSYYAC GEST AYQSPSKDLT IN
Sbjct: 496 PSIPDLSPKKVSPSHNVYLSSLQPSKKEALISRGAKSYYACFGESTRAYQSPSKDLTTIN 555
Query: 969 HRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLY 1003
+ L S ++R L DV VS S VA +L+
Sbjct: 556 NCLRSRPKLRRRL-------DVEFVSHSEVARALF 583
>gi|242071207|ref|XP_002450880.1| hypothetical protein SORBIDRAFT_05g020280 [Sorghum bicolor]
gi|241936723|gb|EES09868.1| hypothetical protein SORBIDRAFT_05g020280 [Sorghum bicolor]
Length = 630
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/629 (52%), Positives = 428/629 (68%), Gaps = 24/629 (3%)
Query: 260 VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFE 319
+DLIASLC Y SE+ ++++M+K++ I DI K ASE K+ENL+ IDTDGL+YF+
Sbjct: 1 MDLIASLCHNYHASEECVKEMMDKSHKAIEDIFGTKALSASEGKTENLDKIDTDGLMYFK 60
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRK 379
L+D S+L +EK N +GELD + + +D + + + G + N+ +KR
Sbjct: 61 GLIDTECFQSNLEKMEK-LCNPNSCEGELDYKSILINNDYIPCAENSPGDSTNLGHSKRV 119
Query: 380 FDSLASPVKTI-------TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRT 432
F+ LASP KTI +SPLSP GG+ + +TPV++AMTTAKWLR
Sbjct: 120 FEILASPTKTIKNMLTVPSSPLSP----------ATGGSVKILQMTPVTSAMTTAKWLRE 169
Query: 433 VICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLM 492
VI LP KPS++L++ L SCD+D+T V R I+LEAIFP+ +R + + AN
Sbjct: 170 VISSLPEKPSSKLQQLLSSCDRDLTNAVTERVSIVLEAIFPTKSSADRGGSLGISCANAF 229
Query: 493 DNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLAT 552
D WAE R++EA KLYYRVLEA+C AE Q + NLT LL+NERFHRC++ACSAELVLAT
Sbjct: 230 DIPWAEARKMEASKLYYRVLEAICRAELQNNNVNNLTPLLSNERFHRCLIACSAELVLAT 289
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKG 612
HK V M+FPAVL+ TG+TAFDLSK+IE+F+RHEE+LPR+L+RHLNSLE++LLESMVWEKG
Sbjct: 290 HKPVFMMFPAVLDSTGLTAFDLSKIIENFVRHEETLPRQLKRHLNSLEQQLLESMVWEKG 349
Query: 613 SSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQ 672
SS+YNSL VARP +++EI RLGLLA+PMPSLD + N GL P K P
Sbjct: 350 SSLYNSLIVARPSVTSEIKRLGLLAEPMPSLDDLVARQNIHVEGL-PATPSKKRAAGPDD 408
Query: 673 NGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPG 732
N D RSPKR C + R+ +VE N T P K + +LK+K PLQS F SPT NP
Sbjct: 409 NADPRSPKRSCNESRNTVVEHNLQTPPPKQSHMVSTSLKAK--CHPLQSTFESPTVSNPV 466
Query: 733 GGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFN 792
GG E CA+ I IFF KI KLAAVRI + ERLQ ++ E VY +F QIL+Q+T+LFFN
Sbjct: 467 GGNEKCADVTIKIFFSKILKLAAVRIRNLCERLQ-HVELTERVYNVFNQILDQQTTLFFN 525
Query: 793 RHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ 852
RHIDQ+ILCC YGVAK+ +L +F+E++ NYRK+ QCKP+VF +V++ S ++
Sbjct: 526 RHIDQLILCCLYGVAKVCKLEPSFKELLNNYRKEAQCKPEVFSNVYI--GSRNRNDVLVS 583
Query: 853 DHVDIITFYNKIFVPAVKPLLVELGPAGT 881
HVDIITFYN++FVPA K LV L +GT
Sbjct: 584 RHVDIITFYNEVFVPAAKSFLVSLISSGT 612
>gi|18426918|gb|AAA98478.2| retinoblastoma-like protein [Zea mays]
Length = 527
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/535 (58%), Positives = 379/535 (70%), Gaps = 20/535 (3%)
Query: 486 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 545
L AN D WAE R++EA KLYYRVLEA+C AE Q + NLT LL+NERFHRC++ACS
Sbjct: 3 LNCANAFDIPWAEARKVEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERFHRCLIACS 62
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
A+LVLATHKTV M+FPAVLE TG+TAFDLSK+IE+F+RHEE+LPREL+RHLNSLEE+LLE
Sbjct: 63 ADLVLATHKTVIMMFPAVLESTGLTAFDLSKIIENFVRHEETLPRELKRHLNSLEEQLLE 122
Query: 606 SMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHK 665
SM WEKGSS+YNSL VARP +++EINRL +PMPSLD + + N GL P K
Sbjct: 123 SMAWEKGSSLYNSLIVARPSVASEINRLVFWLEPMPSLDDLVSRQNVRIEGL-PATPSKK 181
Query: 666 HETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFAS 725
P N D RSPKR C ++R+ +VERN T P K + +LK+K PLQS FAS
Sbjct: 182 RAAGPDDNSDPRSPKRSCNEFRNTVVERNLQTPPPKQSHMVSTSLKAKCH--PLQSTFAS 239
Query: 726 PTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
PT NP GG E CA+ I+IFF KI K A+RI + ER+Q +Q E VY +F+QIL Q
Sbjct: 240 PTVCNPVGGNEKCADVTIHIFFSKILKFPAIRIRNLCERVQCVEQT-ERVYNVFKQILEQ 298
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR 845
+T+LFFNRHIDQ+ILCC YGVAK+ QL LTFREI+ NY+++ QCKP+VF S+++ S
Sbjct: 299 QTTLFFNRHIDQLILCCLYGVAKVCQLELTFREILNNYKREAQCKPEVFSSIYI--GSTN 356
Query: 846 QSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKV 905
++G HV IITFYN++FVPA KP LV L +GT E N G PGSPK
Sbjct: 357 RNGVLVSRHVGIITFYNEVFVPAAKPFLVSLISSGTH------PEDKKNASGQIPGSPKP 410
Query: 906 SVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLT 965
S FP LPDMSPKKVSA+HNVYVSPLR +K+D L+S SS+S+YAC+GE THAYQSPSKDL
Sbjct: 411 SPFPNLPDMSPKKVSASHNVYVSPLRQTKLDLLLSPSSRSFYACIGEGTHAYQSPSKDLA 470
Query: 966 DINHRLNSN-RRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKP 1019
IN RLN N R+V LNFD +VSDS+VA SL NG + + A P
Sbjct: 471 AINSRLNYNGRKVNSRLNFD-------MVSDSVVAGSLGQINGGSTSDPAAAFSP 518
>gi|255543487|ref|XP_002512806.1| conserved hypothetical protein [Ricinus communis]
gi|223547817|gb|EEF49309.1| conserved hypothetical protein [Ricinus communis]
Length = 612
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 323/657 (49%), Positives = 421/657 (64%), Gaps = 66/657 (10%)
Query: 364 GSLSGGAVNITGAKRK-----FDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
S S G +I KRK F A PV + SP ASH AT + V+
Sbjct: 14 SSSSQGTTDIKAVKRKIGETEFTEAAFPV--LHSP-------ASH-------ATGRSVLV 57
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLK-SCDKDVTTDVMRRAHIILEAIFPSSGL 477
A T KWL TVI PLPSKPSAELER L DK + +VM RA+++L A+FP
Sbjct: 58 ---GAQVTRKWLETVISPLPSKPSAELERMLGIHDDKSILDEVMTRANVVLSALFP---- 110
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEA-QVLHAKNLTSLLTNER 536
+R SLQ NLM+++W+EQRR EALKLYYRVLE++C +EA + + +L+ LL+NER
Sbjct: 111 -KRQTVSSLQDVNLMESMWSEQRRSEALKLYYRVLESVCQSEAGKSNTSDHLSGLLSNER 169
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
FHRC+LACSAELV A ML + ERTG+TAFDLSKVIESFI HE +LPRELRRHL
Sbjct: 170 FHRCLLACSAELVSAAQTGTGMLLSVIFERTGVTAFDLSKVIESFIIHEPTLPRELRRHL 229
Query: 597 NSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIA-THINFSSG 655
NS+EE+LLE VWEKGSS+YNSL VARP LS EIN L LLA PMPSL+ ++ T+ G
Sbjct: 230 NSMEEQLLERRVWEKGSSLYNSLVVARPALSDEINSLQLLAQPMPSLETVSPTYF----G 285
Query: 656 GLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPL 715
GL L KH+ S Q+ SPKRPCT++ V+++ N+ P D + ++K
Sbjct: 286 GLLCSTILQKHKLSQAQDRGTISPKRPCTEHADVVLKHNSTYCPKTDCPTAFSTPQTKQT 345
Query: 716 PPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESV 775
P ASP+ + TC++T IN+ F K+ KL A+R ++ ERL+LS+Q RE V
Sbjct: 346 P-------ASPS--SSLQNIPTCSDTAINVLFSKMAKLGAIRTQSIAERLKLSKQFREKV 396
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFR 835
Y LFQQILNQRT+LFFNRH+DQI+LCCFYG+AK+S +NLTF++I NY KQPQC+ Q+F
Sbjct: 397 YFLFQQILNQRTTLFFNRHMDQIVLCCFYGLAKMSGVNLTFKQIYDNYMKQPQCRSQIF- 455
Query: 836 SVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNN 895
W+ + R+ + ++ITFYN+IF+P+VK L E+ + + ++
Sbjct: 456 -----WSVSGNHERNGGQYAEMITFYNRIFLPSVKSFLEEIHHREPPTQVPDIKNID--- 507
Query: 896 DGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTH 955
S FP+LPD+SPKKVS +HNVY+SP+R SK D L S+ +KSYYA VGES +
Sbjct: 508 ----------SAFPSLPDISPKKVSPSHNVYLSPVRLSKQDDLNSNMTKSYYAFVGESIY 557
Query: 956 AYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAAS 1012
Y++PSK L+DIN RLN ++V+ LNFD+ V V +SD +V NSL+ QN S
Sbjct: 558 PYETPSKQLSDINERLNRTKKVKRRLNFDNEGVAV--ISDDVVLNSLFPQNNKCGTS 612
>gi|26190149|emb|CAD21954.1| putative retinoblastoma protein [Physcomitrella patens]
Length = 597
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 311/604 (51%), Positives = 403/604 (66%), Gaps = 37/604 (6%)
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 369
++ DG+ YFE LM+ +SS+L ILE+DYD R++GELDER+FIN +DSL+G+ S S
Sbjct: 1 MNPDGVTYFEGLMEVEQISSNLVILEEDYDGWYRSRGELDERMFINGEDSLIGAVSSSS- 59
Query: 370 AVNITGAKRKFDSLASP-----VKTITSPLSPHRSSASHP---NGIAGGATSKMVVTPVS 421
++ G KRK D++ S V + SP SP S S P G+AGG+T K TPVS
Sbjct: 60 TTSVCGVKRKRDAVTSAGQGRAVSSGASPSSPCGSPESSPAVMGGVAGGSTCKPPPTPVS 119
Query: 422 TAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS---GLG 478
MTTAKWLRTVI PL ++PS ELER+L+ ++++ +++ RA++IL IF + G G
Sbjct: 120 ITMTTAKWLRTVIAPLSAEPSPELERYLRVFERNIASEMKVRANVILGGIFEARKWRGAG 179
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
E A D++W +QRRLEALKLYY+VL AMCTAE+ L +++L L NERFH
Sbjct: 180 E---------AGTSDSMWGDQRRLEALKLYYKVLGAMCTAESHRLRSEHLP-FLPNERFH 229
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
RCMLACSAELVLA+HKTVTM FPAVLE GITAFDLSKVIE F+RHEE+LPREL+RHLNS
Sbjct: 230 RCMLACSAELVLASHKTVTMTFPAVLEPAGITAFDLSKVIEGFVRHEETLPRELKRHLNS 289
Query: 599 LEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATH----INFSS 654
+EERLLESM WEKGSSM+N L +A+ L+ EINRL L+A+PMP+LD ++ +
Sbjct: 290 IEERLLESMAWEKGSSMFNCLAIAKANLAPEINRLKLMAEPMPALDTSKAQQRSPVDTAD 349
Query: 655 GGLS------PVHSLHKHETSPGQNGDIRSPK--RPCTDYRSVLVERNNFTSPVK--DRL 704
G + P SP + G + + K T + E +F SP +
Sbjct: 350 GRIGGSKVDDPAGESKGGAASPPRQGSMTAVKGNAGATGGSAEQGESASFMSPARGPSAF 409
Query: 705 LGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVER 764
++ + PPL AFASP RPNP GGETCAET IN+FF K+ KLAAVRI + ER
Sbjct: 410 TAFSSPQKSRAMPPLLLAFASPQRPNPQAGGETCAETCINVFFQKVLKLAAVRIRNLCER 469
Query: 765 LQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYR 824
LQ SQQ+ E V LN T LFFNRHIDQIILCC YG+ K+S++N+TFR+IIY+YR
Sbjct: 470 LQQSQQVVERVNRALHHALNHETGLFFNRHIDQIILCCVYGICKVSKVNVTFRDIIYHYR 529
Query: 825 KQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELG-PAGTAM 883
KQPQCKP VFR+V +D + +SG++ Q+ DII FYN++FVP+ K L+++G AG A+
Sbjct: 530 KQPQCKPYVFRNVLLDGSVVWRSGKAGQETGDIIRFYNEVFVPSTKSFLLQVGSSAGVAV 589
Query: 884 KTNR 887
R
Sbjct: 590 PKQR 593
>gi|2352797|gb|AAB69650.1| retinoblastoma-related protein 2a [Zea mays]
Length = 420
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/438 (55%), Positives = 297/438 (67%), Gaps = 24/438 (5%)
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHI 650
EL+RHLNSLEE++LESM WEKGSS+YNSL VARP +++EINR GLLA+ MPSLD +
Sbjct: 1 ELKRHLNSLEEQILESMAWEKGSSLYNSLIVARPSVASEINRFGLLAESMPSLDDLVARQ 60
Query: 651 NFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNL 710
N GL P K N D RSPKRPC + RS +VE N T P K + L +L
Sbjct: 61 NIHIEGL-PATPSKKRAAGRDDNADPRSPKRPCNESRSTVVEHNLQTPPPKQCHMVLTSL 119
Query: 711 KSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQ 770
K+K P LQS FASPT NP GG E CA+ I IFF KI KLAA+RI + ER+Q +Q
Sbjct: 120 KAKCHP--LQSTFASPTVSNPVGGNEKCADVTIQIFFSKILKLAAIRIRNLCERIQYMEQ 177
Query: 771 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 830
E VY +F+QIL+Q+T+LFFNRH+ Q+ILCC YGVAK+ QL L+FREI+ NY+K+ QCK
Sbjct: 178 T-ERVYNVFKQILDQQTTLFFNRHMHQLILCCLYGVAKVCQLELSFREILNNYKKEAQCK 236
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
P+VF S+++ S +G HVDIITFYN++FVPA KP LV L +GT E
Sbjct: 237 PEVFLSIYI--GSRNHNGVLISRHVDIITFYNEVFVPAAKPFLVSLISSGTR------PE 288
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACV 950
N G PGSPK+S FP LPDMSPKKVSA+HNVYVSPLR +KMD L+S SS+S+YAC+
Sbjct: 289 DKKNASGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPLRQTKMDLLLSPSSRSFYACI 348
Query: 951 GESTHAYQSPSKDLTDINHRLNSN-RRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSA 1009
GE THAYQSPSKDL IN RLN N RRV LNFD +VSDS+VA SL NG +
Sbjct: 349 GEGTHAYQSPSKDLAAINSRLNYNGRRVNSRLNFD-------MVSDSVVAGSLGQPNGGS 401
Query: 1010 A----ASTCAVLKPEQPD 1023
A+ + L +PD
Sbjct: 402 TSLDPAAAFSPLSKRKPD 419
>gi|297608904|ref|NP_001062372.2| Os08g0538700 [Oryza sativa Japonica Group]
gi|255678608|dbj|BAF24286.2| Os08g0538700, partial [Oryza sativa Japonica Group]
Length = 312
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/298 (72%), Positives = 242/298 (81%), Gaps = 7/298 (2%)
Query: 377 KRKFDSLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMV-VTPVSTAMTTAKWLRTV 433
+RK+D +ASP K+ITSP +SP R AS P G G +SKM +TPVSTAMTTAKWLR+
Sbjct: 7 QRKYDVMASPAKSITSPSPMSPPRFCAS-PTG-NGYCSSKMAPITPVSTAMTTAKWLRST 64
Query: 434 ICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMD 493
I PLPSKPS EL RF +CDKDVT D+ RRA IIL AIF SS GER T S++ N +D
Sbjct: 65 ISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGERICT-SVRSTNRID 123
Query: 494 NIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH 553
IW EQR++EALKLYYRVLE+MC AE Q+L NLTSLL+NERFHRCM+ACSAELVLATH
Sbjct: 124 AIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRCMIACSAELVLATH 183
Query: 554 KTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 613
KTVTM+FPAVLE+TGITAFDLSKVIESF+RHE++LPREL+RHLNSLEERLLESM WEKGS
Sbjct: 184 KTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLEERLLESMAWEKGS 243
Query: 614 SMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPG 671
SMYNSL VARP LSAEINRLGLLA+PMPSLDAIA H N S GL P+ K E SPG
Sbjct: 244 SMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL-PFQKQEHSPG 300
>gi|375962740|gb|AFB17948.1| RBR-like protein, partial [Pinus sylvestris]
Length = 417
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/392 (59%), Positives = 277/392 (70%), Gaps = 21/392 (5%)
Query: 619 LTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDI-R 677
L VA+P LSAEINRLGLLADPMPSLDAIA H +P+ + E S N D
Sbjct: 1 LIVAKPSLSAEINRLGLLADPMPSLDAIAMHYG------APLAIPQRTEASSDPNVDTPS 54
Query: 678 SPKRPCTDYRS-----VLVERNNFTSPVKDRLLGLNNLKSKP-LPPPLQSAFASPTRPNP 731
SP+R S V+ E N+F SPVK+R + K PPLQSAFASPTRPNP
Sbjct: 55 SPQRLANTVVSNETTGVMGEHNSFVSPVKERSSAFSAFPVKSRQQPPLQSAFASPTRPNP 114
Query: 732 GGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFF 791
GGGETCA+T I +F K+ KLAA+RI + +RLQ E VY L +L ++T +FF
Sbjct: 115 YGGGETCADTTIYVFCQKVLKLAAIRIKCLSDRLQQPNLAMEQVYRLLNLVLREQTGIFF 174
Query: 792 NRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE 851
NRHIDQ+ILC FYG+AKI Q+NLTFREII NYRKQPQCKPQVFR+VFV+ +R+ G+
Sbjct: 175 NRHIDQVILCSFYGIAKIQQMNLTFREIINNYRKQPQCKPQVFRNVFVE---SRRYGKLG 231
Query: 852 QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL 911
+ VDII FYN++F+PAVKPLLV+ P+ + ++ + SE DGP PGSP S F L
Sbjct: 232 HETVDIIAFYNRVFIPAVKPLLVKFAPSESDVEQSHGSEDTEKIDGPSPGSPGSSPFQRL 291
Query: 912 PDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRL 971
PDMSPKKVSATHNVYVSPLR++KM+ L SH+SKSYYACVGEST AYQSPSKDLT IN+RL
Sbjct: 292 PDMSPKKVSATHNVYVSPLRSAKMENLNSHNSKSYYACVGESTRAYQSPSKDLTAINNRL 351
Query: 972 NSNRRVRGTLNFDDVDVDVGLVSDSMVANSLY 1003
NS RRV G LNFD D GLVSDS+VA S+Y
Sbjct: 352 NS-RRVSGRLNFD----DPGLVSDSVVAGSVY 378
>gi|345290645|gb|AEN81814.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290657|gb|AEN81820.1| AT3G12280-like protein, partial [Capsella rubella]
gi|345290659|gb|AEN81821.1| AT3G12280-like protein, partial [Capsella rubella]
gi|345290661|gb|AEN81822.1| AT3G12280-like protein, partial [Capsella rubella]
gi|345290663|gb|AEN81823.1| AT3G12280-like protein, partial [Capsella rubella]
Length = 172
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/172 (84%), Positives = 155/172 (90%)
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR VICPL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +C
Sbjct: 1 MTTAKWLRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 60
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
GSLQG +LMD+IWAEQRRLEALKLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRCMLA
Sbjct: 61 GSLQGVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
CSAELVLATHKT+TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRH 172
>gi|345290665|gb|AEN81824.1| AT3G12280-like protein, partial [Neslia paniculata]
Length = 172
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/172 (84%), Positives = 155/172 (90%)
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR VICPL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +C
Sbjct: 1 MTTAKWLRNVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGGQCGG 60
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
GSLQ +LMD+IWAEQRRLEALKLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRCMLA
Sbjct: 61 GSLQAVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
CSAELVLATHKT+TMLFPAVLERTGITAFDLSKVIESFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRH 172
>gi|345290647|gb|AEN81815.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290649|gb|AEN81816.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290651|gb|AEN81817.1| AT3G12280-like protein, partial [Capsella grandiflora]
gi|345290655|gb|AEN81819.1| AT3G12280-like protein, partial [Capsella grandiflora]
Length = 172
Score = 303 bits (776), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/172 (84%), Positives = 154/172 (89%)
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR VICPL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +C
Sbjct: 1 MTTAKWLRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 60
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
GSLQ +LMD+IWAEQRRLEALKLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRCMLA
Sbjct: 61 GSLQAVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
CSAELVLATHKT+TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRH 172
>gi|345290653|gb|AEN81818.1| AT3G12280-like protein, partial [Capsella grandiflora]
Length = 172
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 145/172 (84%), Positives = 154/172 (89%)
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVT 483
MTTAKWLR VICPL KPS LE FLKSCD+D+T DV RRAHIILEAIFP+S LG +C
Sbjct: 1 MTTAKWLRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGG 60
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
GSLQ +LMD+IWAEQRRLEALKLYYRVLEAMC AEAQ+LHA NL SLLTNERFHRCMLA
Sbjct: 61 GSLQXVDLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLA 120
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
CSAELVLATHKT+TMLFPAVLERTGITAFDL KVIESFIRHE+SLPRELRRH
Sbjct: 121 CSAELVLATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRH 172
>gi|302814637|ref|XP_002989002.1| hypothetical protein SELMODRAFT_451523 [Selaginella moellendorffii]
gi|300143339|gb|EFJ10031.1| hypothetical protein SELMODRAFT_451523 [Selaginella moellendorffii]
Length = 879
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 186/255 (72%), Gaps = 6/255 (2%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVS MTTAKWLRTVI PLP++PS EL +LKSCD+D+T +V R +LEAIFP
Sbjct: 337 TPVSVTMTTAKWLRTVIAPLPAEPSTELLDYLKSCDRDITEEVTHRGKALLEAIFPVYPQ 396
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
G T G++ W QRR EA KLYYRVL A+C AE L +KNLTS+LT+E+F
Sbjct: 397 GSWRATLHSSGSSE----WTVQRRSEASKLYYRVLTALCRAEFLRLQSKNLTSVLTSEKF 452
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HRCMLACSAELVLA HKT+ + FPAVLE TGITAFDLSKVIESF+RHE +LPREL+RHLN
Sbjct: 453 HRCMLACSAELVLAAHKTIILAFPAVLEPTGITAFDLSKVIESFVRHEPTLPRELKRHLN 512
Query: 598 SLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGL 657
S+EERLLESM WEKGSSMYNSL VA+P + +I RL L+++P+ +L+ + ++S GG
Sbjct: 513 SIEERLLESMAWEKGSSMYNSLVVAKPRFAPDIRRLELISEPLRTLEPLIP--SYSQGGT 570
Query: 658 SPVHSLHKHETSPGQ 672
S + SP +
Sbjct: 571 SKGEDMAAESNSPTE 585
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 177/268 (66%), Gaps = 17/268 (6%)
Query: 736 ETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHI 795
E E + +FF K+ KLAA RI + ERL + E ++ + + LN RT++FFNRHI
Sbjct: 585 EAMHEIVMVVFFQKVLKLAASRIKVLCERLMQPSFVVEHIFQVVEYALN-RTTIFFNRHI 643
Query: 796 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
DQI+LC YGV K+ LN++F++II+ YRKQPQ + VF+SV++ + G +E
Sbjct: 644 DQILLCSTYGVCKVLSLNVSFKDIIFQYRKQPQSRNHVFKSVYLK----HRGGIAETG-- 697
Query: 856 DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP-CPGSPKVSVFPALPDM 914
DII FYN +FVPAVK LV + P +M ++ S+V N P P P SV PA+PDM
Sbjct: 698 DIIKFYNTVFVPAVKSFLVTIAPPSVSMTASQ-SDVADENTAPNSPARP--SVLPAIPDM 754
Query: 915 SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN 974
SP+KVSA HNVYVSPLR +K++ ++S SKS YACVGESTHAYQSPSKDLT IN RLNS+
Sbjct: 755 SPRKVSARHNVYVSPLRNTKVENIMSPHSKSLYACVGESTHAYQSPSKDLTAINCRLNSS 814
Query: 975 RRVRGTLNFDDVDVDVGLVSDSMVANSL 1002
R L+F + ++SDS V+ +L
Sbjct: 815 NGRR--LDF----LGPSMISDSFVSGAL 836
Score = 216 bits (550), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 177/312 (56%), Gaps = 22/312 (7%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
EAR C+ L++DE ++ + LFR L S++ G +EAER W A +LY++
Sbjct: 21 EARFRQCCEARLALDEIRMEKAVALFRAITSL---KDSSVLGGSADEAERIWMACILYVL 77
Query: 85 RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
++L + + F + +LR ++IV+FF+ELPQFL K L+++YG +++
Sbjct: 78 KKLDR---------NETHTFTVSQVLRATNVSIVEFFRELPQFLEKCTATLNDLYGVEFQ 128
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLL 204
L+AKE QA FVHL +L Y R Y ++F P + G + FGW
Sbjct: 129 EHLQAKEDQATFVHLMVLFNHYNRNYLDYFKPQ----------MLSDGTSTGQQHFGWFF 178
Query: 205 FLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIA 264
FLA+R+ +F DLVTCTN L+ ++ ++I+H+PV R+F++ ++S F K+ +KGV+L+A
Sbjct: 179 FLAVRMRVLGQFPDLVTCTNALLGVIVVMIVHMPVSLRSFSLENTSLFPKRDDKGVNLVA 238
Query: 265 SLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDD 324
S+ S+ D E D+ +++K +I + NL+ + DG++YFE L++D
Sbjct: 239 SISSVGDACEGDVMSMLQKIQEMIPTVFPSLSGIGDSSAVSNLQGFNCDGILYFEGLLED 298
Query: 325 SSLSSSLNILEK 336
L++ L ILE+
Sbjct: 299 HMLATHLQILER 310
>gi|302786676|ref|XP_002975109.1| hypothetical protein SELMODRAFT_451524 [Selaginella moellendorffii]
gi|300157268|gb|EFJ23894.1| hypothetical protein SELMODRAFT_451524 [Selaginella moellendorffii]
Length = 867
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 186/255 (72%), Gaps = 6/255 (2%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVS MTTAKWLRTVI PLP++PS EL +LKSCD+D+T +V R +LEAIFP
Sbjct: 337 TPVSVTMTTAKWLRTVIAPLPAEPSIELLDYLKSCDRDITEEVTHRGKALLEAIFPVYPQ 396
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
G T G++ W QRR EA KLYYRVL A+C AE L +KNLTS+LT+E+F
Sbjct: 397 GSWRATLHSSGSSE----WTVQRRSEASKLYYRVLTALCRAEFLRLQSKNLTSVLTSEKF 452
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HRCMLACSAELVLA HKT+ + FPAVLE TGITAFDLSKVIESF+RHE +LPREL+RHLN
Sbjct: 453 HRCMLACSAELVLAAHKTIILAFPAVLEPTGITAFDLSKVIESFVRHEPTLPRELKRHLN 512
Query: 598 SLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGL 657
S+EERLLESM WEKGSSMYNSL VA+P + +I RL L+++P+ +L+ + ++S GG
Sbjct: 513 SIEERLLESMAWEKGSSMYNSLVVAKPRFAPDIRRLELISEPLRTLEPLIP--SYSQGGT 570
Query: 658 SPVHSLHKHETSPGQ 672
S + SP +
Sbjct: 571 SKGEDMAAESNSPTE 585
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 169/267 (63%), Gaps = 27/267 (10%)
Query: 736 ETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHI 795
E E + +FF K+ KLAA RI + ERL + E ++ + + LN RT++FFNRHI
Sbjct: 585 EAMHEIVMVVFFQKVLKLAASRIKVLCERLMQPSFVVEHIFQVVEYALN-RTTIFFNRHI 643
Query: 796 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
DQI+LC YGV K+ LN++F++II+ YRKQPQ + VF+SV++ + G +E
Sbjct: 644 DQILLCSTYGVCKVLSLNVSFKDIIFQYRKQPQSRNHVFKSVYLK----HRGGIAETG-- 697
Query: 856 DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMS 915
DII FYN +FVPAVK LV + P +M ++ + N A+PDMS
Sbjct: 698 DIIKFYNTVFVPAVKSFLVTIAPPSVSMTASQSDVADENT--------------AIPDMS 743
Query: 916 PKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR 975
P+KVSA HNVYVSPLR +K++ ++S SKS YACVGESTHAYQSPSKDLT IN RLNS+
Sbjct: 744 PRKVSARHNVYVSPLRNTKVENIMSPHSKSLYACVGESTHAYQSPSKDLTAINCRLNSSN 803
Query: 976 RVRGTLNFDDVDVDVGLVSDSMVANSL 1002
R L+F + ++SDS V+ +L
Sbjct: 804 GRR--LDF----LGPSMISDSFVSGAL 824
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 176/312 (56%), Gaps = 22/312 (7%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
EAR C+ L++DE ++ + LFR L S++ G +EAER W A +LY++
Sbjct: 21 EARFRQCCEARLALDEIRMEKAVALFRAITSL---KDSSVLGGSADEAERIWMACILYVL 77
Query: 85 RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
++L + + F + +LR ++IV+FF+ELPQFL K L+++YG +++
Sbjct: 78 KKLDR---------NETHTFTVSQVLRATNVSIVEFFRELPQFLEKCTATLNDLYGVEFQ 128
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLL 204
L+AKE QA FVHL +L Y R Y ++F P + G + FGW
Sbjct: 129 EHLQAKEDQATFVHLMVLFNHYNRNYLDYFKPQ----------MLSDGTSTGQQHFGWFF 178
Query: 205 FLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIA 264
FLA+R+ +F DLVTCTN L+ ++ ++I+H+PV R+F++ ++S F K+ +KGV+L+A
Sbjct: 179 FLAVRMRVLGQFPDLVTCTNALLGVIVVMIVHMPVSLRSFSLENTSLFPKRDDKGVNLVA 238
Query: 265 SLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDD 324
S+ S+ D E D+ +++K +I + NL+ + DG++YFE L++D
Sbjct: 239 SISSVGDACEGDVMSMLQKIQEMIPTVFPSLSGIGDSSAVSNLQGFNCDGILYFEGLLED 298
Query: 325 SSLSSSLNILEK 336
L + L ILE+
Sbjct: 299 HMLGTHLQILER 310
>gi|145354724|ref|XP_001421627.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581865|gb|ABO99920.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1002
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 253/891 (28%), Positives = 414/891 (46%), Gaps = 106/891 (11%)
Query: 141 ADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRF 200
A+ E L+ +EL++ F +++K + R F DA+ A A +
Sbjct: 134 AEVERVLKIRELRSAFAFNKVIAKKFHEFMRVHF---DADSPAGVAVA----------KL 180
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKK--SNK 258
GW L++ + + F DL +C + LV++ A L+I+ P ++ + K + K
Sbjct: 181 GWALYVCAKCESLPTFPDLYSCYHLLVAVEAFLLINAPRESLRTSLKNMVSMTAKDETTK 240
Query: 259 GVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYF 318
D +ASL +D +R + + + ++K EA+ S++ +++ +
Sbjct: 241 LPDPLASLSLASKAKKDTVRAMSDA----VLKVVKASFPEATMDASKHFDDVAPSDMC-- 294
Query: 319 ENLMDDSSLSSSLNILEKDYDNATRNKGEL--DERVFI-NEDDSLLGSGSLSGGAVNITG 375
+ D S +++E+ A+ G L DE +++ E S G G +
Sbjct: 295 AQGVFDGERDVSASVVERYSRVASETFGRLAVDETLYLYTEMTSAESRGRKIIGDLADCK 354
Query: 376 AKRKFDSLASPVK-TITSPLSPHR-----------SSASHPNGIAGGATSKMVVTPVSTA 423
+ S+A+P + +P SP R S GI + TP+S A
Sbjct: 355 TTTTYGSMATPARRKRVAPFSPIRPKKIPIHGVPPSPMHSLRGIMASGVGGVAATPISQA 414
Query: 424 MTTAKWLRTVIC---PLPSKPSAELERFL-------KSCDKDVTTDVMRRAHIILEAIFP 473
M +A WL+ V+C L +K +AEL+RF+ ++ K VT R I E
Sbjct: 415 MASASWLQDVVCGSSDLETK-TAELQRFVPDNPEIVQALKKKVTNFGQRIGQAIRE---- 469
Query: 474 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAK----NLT 529
L T + +MD + +QR E +++ L + E + + N T
Sbjct: 470 -DALVTTMRTDISPHSTVMDEL-VKQRTSEVSHVFFYFLNRILKDELERIAGDKKDVNFT 527
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+LL ++RF + ++ C E+V++T+KT T+ FPA GI FDL+ +IE F+R + S+P
Sbjct: 528 TLLASDRFTKSLVTCCMEVVVSTYKTSTLAFPATTHLMGIHPFDLATIIEPFVRADMSMP 587
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSLTV----ARPVLSAEINRLGLLADPMPSLDA 645
RE++RH NSLEE+ LE + W KGS+++ L AR A G A P
Sbjct: 588 REIQRHFNSLEEKTLERLAWCKGSTLFEFLKTFHESARGSGGASTALPGRTAPRSPQAPK 647
Query: 646 IATHINFSSGGLSPVHSLH--KHETSPGQNGDI-----RSPKRPCTDYRSVLVERNNFTS 698
+ + ++ V ++ + E S G + D+ +SP R R+ + F+S
Sbjct: 648 RVSTPVLNVASVAEVAAIGGTEREGSSGDDADLVMAQCQSPVR-----RAPTSAFSAFSS 702
Query: 699 PVKDRLLGLNNL-KSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVR 757
P++ + + +PLP +A + T P G + CA + +FF K+ LAA R
Sbjct: 703 PLRGATTPRRRVSRGEPLPVRF-AAVRNHTVEQP-SGCDVCAFKALRMFFAKVMHLAARR 760
Query: 758 INAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAK----ISQLN 813
+ + RL LS + +Y L + ++ ++T+L +NRHIDQIIL YGV K IS +
Sbjct: 761 LGDLASRLNLSTDVTRDIYALIEHVVYEQTNLVYNRHIDQIILVSVYGVCKASAGISSNS 820
Query: 814 LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV---DIITFYNKIFVPAVK 870
L F++IIY Y KQPQ ++F WA + E + V DII+FYNK+FV VK
Sbjct: 821 LQFKDIIYQYSKQPQSSEEIF------WAVVLEQNDPELEVVNRGDIISFYNKVFVGRVK 874
Query: 871 PLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPD--MSPKKVSA--THNVY 926
L+ L T N + DG G+ VSV ALP SP++ N+Y
Sbjct: 875 EFLLTLRERPARDTT------NLDTDGGEQGN-TVSVDDALPFGLSSPRRRLPIDNQNIY 927
Query: 927 VSPLRTSKMDALISHS------SKSYYACVGESTHAYQSPSKDLTDINHRL 971
VSP+R ++ +++ ++S +A +GES +AY SPS D IN +L
Sbjct: 928 VSPMRPERVASMLHEGAPPTPRTRSLFATIGESVYAYTSPSSDFEAINRKL 978
>gi|308812744|ref|XP_003083679.1| retinoblastoma protein (IC) [Ostreococcus tauri]
gi|116055560|emb|CAL58228.1| retinoblastoma protein (IC) [Ostreococcus tauri]
Length = 962
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 248/937 (26%), Positives = 434/937 (46%), Gaps = 124/937 (13%)
Query: 105 NLCHILRVMKLNIVDFFKELPQFLVKSG---------PILSNIYGADWENRLEAKELQAN 155
++ +L + +V+ +P+FL P L + A+ E + +E+++
Sbjct: 59 DVTGVLEDCETTLVEVLDAMPEFLSAGARALATRLKSPSLGSSAVAEAERAMRLREMRSA 118
Query: 156 FVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSR 215
F +++K + R F +D+ G + A R GW ++ + A +
Sbjct: 119 FAFNKVIAKKFHEFIRVHF-DADSRGGRTVA------------RLGWAVYQCAKCEALPK 165
Query: 216 FKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS-SRFVKKSNKGV-DLIASLCSIYDTS 273
F DL +C + LV++ A L+++ P ++ + S K + G+ D +ASL S T
Sbjct: 166 FPDLYSCYHLLVAVEAFLLVNAPRELLRTSLKNMVSMTAKDAVTGLPDPLASLSSSSKTK 225
Query: 274 EDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI 333
+ +R + + + ++LK A + + E++ D+ ++S +
Sbjct: 226 VETVRAM----SVAVINVLKATFPSAVFDVTSHFEDVAPSDACVRGVFDGDADVASP--V 279
Query: 334 LEKDYDNATRNKGEL--DERVFI-NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV--K 388
+E+ A G L DE +++ E + G G + + S+A+P K
Sbjct: 280 MERYRRVAAETFGRLAVDETLYLYTEMEGEDSRGRKIIGDLASCATETTHGSMATPTRRK 339
Query: 389 TITSPLSPHRS------------SASHPNGIAGGATSKMVV-TPVSTAMTTAKWLRTVIC 435
+P SP+R S S I G + +V TP+S AM +A WL+ ++C
Sbjct: 340 RAAAPFSPYRPKKISTIQEDGGMSMSPMRAIRGPLPAGVVPPTPISQAMASASWLQDIVC 399
Query: 436 P---LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG---- 488
L +K AEL RF+ ++ V + ++ ++ + + + E + +++
Sbjct: 400 ASSDLETK-LAELRRFVPG-EETVIDKLHKKVDVLGQRL--GQAIREDALVTTMRTDISP 455
Query: 489 -ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAE 547
+ +MD + QR E + +++ L + AE+QV N+ +LL + RF + +LAC E
Sbjct: 456 HSMVMDEL-VRQRTTELVHIFFFFLNRILRAESQVKKDANIVALLQSSRFTKSLLACCME 514
Query: 548 LVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESM 607
+++AT+KT T+ FPA GI FDL+ +IE F+R + LPRE+ RH NSLEE+ LE +
Sbjct: 515 VIVATYKTSTLTFPATTHLLGIHPFDLTTIIEPFVRADMDLPREIVRHFNSLEEKTLERL 574
Query: 608 VWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHIN-------FSSGGLSPV 660
W KGS++++ L +NR G + + + AT I F+ ++ V
Sbjct: 575 AWCKGSALFDFLQ----SFQESVNRGGTTS--TSTSNPRATSIPKRPVSPMFNVAAIAEV 628
Query: 661 HSLHKHETSPGQNGDIRSP------KRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK- 713
++ + D+ P +RP T +V F+SP++ G + K
Sbjct: 629 AAMGEPARDAAAEKDLVMPQCHSPVRRPPTSAFTV------FSSPLR----GATTPRRKL 678
Query: 714 PLPPPLQSAFASPTRPNPGG--GGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQI 771
P PL FA+ + G + CA + IFF K+ +LAA R+ + RL+LS ++
Sbjct: 679 PGGQPLPERFAAVRNHDVEQPIGCDVCAFKALQIFFAKVMQLAARRLGDLASRLKLSPEV 738
Query: 772 RESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKIS---QLNLTFREIIYNYRKQPQ 828
VY L + ++ ++T+L +NRH+DQIIL YGV K++ + F++IIY Y KQPQ
Sbjct: 739 TRDVYALIEHVIYEQTNLVYNRHVDQIILASVYGVCKVNGGCGGAVQFKDIIYQYSKQPQ 798
Query: 829 CKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRV 888
C ++F +V ++ + DII+FYNK+FV V+ L+ L A+ +
Sbjct: 799 CTEEIFWTVVIEQTDPELEVSTRG---DIISFYNKVFVSRVRTFLLALRERAEALAAQKT 855
Query: 889 SEVNHNNDGPCPGSPKVSVFPALP--DMSPKK--VSATHNVYVSPLRTSKMDALISHS-- 942
+ DG KVSV P SP++ N+YVSP+R + A++ +
Sbjct: 856 T------DG-----EKVSVDEPFPFGISSPRRRLPVENQNIYVSPMRPEREAAMLQDAAV 904
Query: 943 --------SKSYYACVGESTHAYQSPSKDLTDINHRL 971
++S +A +GES H S + D IN L
Sbjct: 905 QGEPSTPRTRSLFATIGESIHGDPSSANDFEAINKHL 941
>gi|55978008|gb|AAV68604.1| retinoblastoma protein [Ostreococcus tauri]
Length = 987
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 248/937 (26%), Positives = 434/937 (46%), Gaps = 124/937 (13%)
Query: 105 NLCHILRVMKLNIVDFFKELPQFLVKSG---------PILSNIYGADWENRLEAKELQAN 155
++ +L + +V+ +P+FL P L + A+ E + +E+++
Sbjct: 84 DVTGVLEDCETTLVEVLDAMPEFLSAGARALATRLKSPSLGSSAVAEAERAMRLREMRSA 143
Query: 156 FVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSR 215
F +++K + R F +D+ G + A R GW ++ + A +
Sbjct: 144 FAFNKVIAKKFHEFIRVHF-DADSRGGRTVA------------RLGWAVYQCAKCEALPK 190
Query: 216 FKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS-SRFVKKSNKGV-DLIASLCSIYDTS 273
F DL +C + LV++ A L+++ P ++ + S K + G+ D +ASL S T
Sbjct: 191 FPDLYSCYHLLVAVEAFLLVNAPRELLRTSLKNMVSMTAKDAVTGLPDPLASLSSSSKTK 250
Query: 274 EDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI 333
+ +R + + + ++LK A + + E++ D+ ++S +
Sbjct: 251 VETVRAM----SVAVINVLKATFPSAVFDVTSHFEDVAPSDACVRGVFDGDADVASP--V 304
Query: 334 LEKDYDNATRNKGEL--DERVFI-NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV--K 388
+E+ A G L DE +++ E + G G + + S+A+P K
Sbjct: 305 MERYRRVAAETFGRLAVDETLYLYTEMEGEDSRGRKIIGDLASCATETTHGSMATPTRRK 364
Query: 389 TITSPLSPHRS------------SASHPNGIAGGATSKMVV-TPVSTAMTTAKWLRTVIC 435
+P SP+R S S I G + +V TP+S AM +A WL+ ++C
Sbjct: 365 RAAAPFSPYRPKKISTIQEDGGMSMSPMRAIRGPLPAGVVPPTPISQAMASASWLQDIVC 424
Query: 436 P---LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG---- 488
L +K AEL RF+ ++ V + ++ ++ + + + E + +++
Sbjct: 425 ASSDLETK-LAELRRFVPG-EETVIDKLHKKVDVLGQRL--GQAIREDALVTTMRTDISP 480
Query: 489 -ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAE 547
+ +MD + QR E + +++ L + AE+QV N+ +LL + RF + +LAC E
Sbjct: 481 HSMVMDEL-VRQRTTELVHIFFFFLNRILRAESQVKKDANIVALLQSSRFTKSLLACCME 539
Query: 548 LVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESM 607
+++AT+KT T+ FPA GI FDL+ +IE F+R + LPRE+ RH NSLEE+ LE +
Sbjct: 540 VIVATYKTSTLTFPATTHLLGIHPFDLTTIIEPFVRADMDLPREIVRHFNSLEEKTLERL 599
Query: 608 VWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHIN-------FSSGGLSPV 660
W KGS++++ L +NR G + + + AT I F+ ++ V
Sbjct: 600 AWCKGSALFDFLQ----SFQESVNRGGTTS--TSTSNPRATSIPKRPVSPMFNVAAIAEV 653
Query: 661 HSLHKHETSPGQNGDIRSP------KRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK- 713
++ + D+ P +RP T +V F+SP++ G + K
Sbjct: 654 AAMGEPARDAAAEKDLVMPQCHSPVRRPPTSAFTV------FSSPLR----GATTPRRKL 703
Query: 714 PLPPPLQSAFASPTRPNPGG--GGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQI 771
P PL FA+ + G + CA + IFF K+ +LAA R+ + RL+LS ++
Sbjct: 704 PGGQPLPERFAAVRNHDVEQPIGCDVCAFKALQIFFAKVMQLAARRLGDLASRLKLSPEV 763
Query: 772 RESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKIS---QLNLTFREIIYNYRKQPQ 828
VY L + ++ ++T+L +NRH+DQIIL YGV K++ + F++IIY Y KQPQ
Sbjct: 764 TRDVYALIEHVIYEQTNLVYNRHVDQIILASVYGVCKVNGGCGGAVQFKDIIYQYSKQPQ 823
Query: 829 CKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRV 888
C ++F +V ++ + DII+FYNK+FV V+ L+ L A+ +
Sbjct: 824 CTEEIFWTVVIEQTDPELEVSTRG---DIISFYNKVFVSRVRTFLLALRERAEALAAQKT 880
Query: 889 SEVNHNNDGPCPGSPKVSVFPALP--DMSPKK--VSATHNVYVSPLRTSKMDALISHS-- 942
+ DG KVSV P SP++ N+YVSP+R + A++ +
Sbjct: 881 T------DG-----EKVSVDEPFPFGISSPRRRLPVENQNIYVSPMRPEREAAMLQDAAV 929
Query: 943 --------SKSYYACVGESTHAYQSPSKDLTDINHRL 971
++S +A +GES H S + D IN L
Sbjct: 930 QGEPSTPRTRSLFATIGESIHGDPSSANDFEAINKHL 966
>gi|384254177|gb|EIE27651.1| hypothetical protein COCSUDRAFT_55641 [Coccomyxa subellipsoidea
C-169]
Length = 1179
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 313/607 (51%), Gaps = 67/607 (11%)
Query: 70 EEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNE-FNLCHILRVMKLNIVDFFKELPQFL 128
E+ +R W+A +L++ + L + G D L IL +++ DF KELP +
Sbjct: 58 EDTKRLWYASILFIAKSLRR----DAAGGPGDAPGITLTKILDSFGISLADFLKELPVVV 113
Query: 129 VKSGPILSNIYG--ADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQS 185
K+ P LS + G + E RL +ELQ +FV+ ++L+K + +++++F LP
Sbjct: 114 KKAEPSLSKLLGPISPMERRLRLRELQTSFVYTTVLAKKCRDLFQQYFKLP--------- 164
Query: 186 AAASTSGYISDYHRFG--WLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN 243
TSG S+ F W LF+ + F F DLV N L+ +LA HVP R+
Sbjct: 165 ----TSGCYSEPSVFHLVWQLFIVAKAKLFPPFPDLVASFNLLICVLAFAFCHVPAEQRS 220
Query: 244 FNIHDSSRFVKKSNKG-VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASEC 302
+ D+ R +++ +G VD++ SL + + +L+ +M + +T++ +L + +E
Sbjct: 221 VQLTDTERLPRRTEQGSVDVLESLGLVNKANIKELKPLMARLDTVLRSLLADFASDKAEG 280
Query: 303 KSENLENIDTDGLI----YFENLMDD-SSLSSSLNILEKDYDNATRNK--------GELD 349
+ EN+ + + D L+ +F ++ SL+ + + L + Y+ A+ + E+D
Sbjct: 281 E-ENVSHPEADNLVLVSKFFPGVLSSRESLARAQDELNRTYEQASTEEISSMYSSISEID 339
Query: 350 ERVFINE------DDSLLGSGSLSGGAVNITGAKRKFDSLA-----SPVKTITSPLSP-H 397
ER F++ D G+ + G + SL +PV+ + SPL P +
Sbjct: 340 ERPFVDGRQPRDVPDIARGAATPPSMTKCQVGTPVRNRSLGGGVPGTPVRLLPSPLRPAN 399
Query: 398 RSSASHPNGIAGGATSKMVV------TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
+ P+ + GA+S TPV+ AM A WL+ + PS+ + E+++F ++
Sbjct: 400 QHMLQTPSPVRLGASSFFATPGVYPGTPVTEAMAAASWLQDLTARSPSELTPEVKQFFET 459
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
+V V R + +A+FP + G L GA++ R E +KLY+RV
Sbjct: 460 AGPEVGAAVAARVAQMADAVFPPQPDQDTVTLGVLNGAHV------SPRGAEGVKLYFRV 513
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITA 571
LE M AE N TSLL + +F++C+ C+ E+V+A+++ VT FPAVLER ++A
Sbjct: 514 LEGMLKAEQDRTGRTNFTSLLASTQFNKCLAGCAFEVVIASYRMVTHAFPAVLERLQLSA 573
Query: 572 FDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA--RPVL 626
FD+SK++ +F+RH + +PREL+RHL S+EE++LE WE+GSS+Y LT A P
Sbjct: 574 FDMSKLVGTFVRHISPADQVPRELKRHLFSIEEKILEQQAWERGSSLYPLLTSACSAPPA 633
Query: 627 SAEINRL 633
+E RL
Sbjct: 634 DSESPRL 640
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 152/314 (48%), Gaps = 52/314 (16%)
Query: 694 NNFTSPVKD---RLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKI 750
++F SP++ LLG+ + L +AF PG G E ++ F K+
Sbjct: 758 SSFMSPLRKPAAELLGVPGM--------LPAAFG-----RPGEGLERPGRAVVSDFLNKV 804
Query: 751 NKLAAVRINAMVERLQLS----QQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
KLAA+RIN + +RL QI V+ + ++ T L + RH+DQ+ILC YGV
Sbjct: 805 LKLAALRINDICDRLDFEPLDRSQIVSQVFTMVSHVVTDHTGLLYGRHLDQVILCALYGV 864
Query: 807 AKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIF 865
K++QL N+TF++II +Y+KQ Q K +FR+V + Q ++ D+I FYN +F
Sbjct: 865 CKVNQLKNITFKDIITHYKKQAQAKNSIFRTVSIQLTPDLQVVKTG----DVIEFYNAVF 920
Query: 866 VPAVKPLLVELG--------------PA-----GTAMKTNRVSEVNHNNDGPCPGSPKVS 906
+PA K L++LG PA GT + S ++ PG+
Sbjct: 921 IPATKSFLLQLGNKTAPLATLPTLSVPATPLRLGTPLGPRSFSTPPAHDRLGAPGAFLGG 980
Query: 907 VFPALPDMSPKKVSATHNVYVSPLRTSKMDALI--SHSSKSYYACVGESTHAYQSPSKDL 964
PAL K V VSP+R S + S S + A +GEST AYQSPSKDL
Sbjct: 981 ASPALLGTPGGK------VLVSPMRQSPSQQVFLGSRSHSLFSARMGESTAAYQSPSKDL 1034
Query: 965 TDINHRLNSNRRVR 978
+ IN RL R
Sbjct: 1035 SFINCRLQQRHPFR 1048
>gi|121077851|gb|ABM47317.1| retinoblastoma-related protein [Volvox carteri f. nagariensis]
gi|169626712|gb|ACA58120.1| retinoblastoma-related protein 1 [Volvox carteri f. nagariensis]
gi|297592069|gb|ADI46854.1| MAT3f [Volvox carteri f. nagariensis]
Length = 1107
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 245/874 (28%), Positives = 384/874 (43%), Gaps = 143/874 (16%)
Query: 78 AFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMK---LNIVDFFKELPQFLVKSGPI 134
A +L++ R L Q G + F C I R++ +N++DFF+E+ + K
Sbjct: 70 ASLLFVARVLFAAQA---QGGRTVSNFG-CPISRIVAAAGINLLDFFREVNVVVSKLSSY 125
Query: 135 LSNIYGAD--WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSG 192
G+ + + + KE V + +L+K YK + D
Sbjct: 126 FEARGGSSRLFAQQAQLKENSETVVVMGLLAKKYKDNFGMLLHQLDF------------- 172
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRF 252
+ + GW FL LRI S F D+V+C L + AIL+ H P + D
Sbjct: 173 FKQIVLKLGWNAFLVLRIKLLSSFPDVVSCVELLPCVFAILVSHAP------QLPDCLSH 226
Query: 253 VKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE-----NL 307
V + L+ SL I ++ + L++ +L E E S NL
Sbjct: 227 VSGAEYRSALLKSLSEICKADYSRVQARIPSVEALLSHVLTSAVPEWREAASHAQLESNL 286
Query: 308 -------ENIDTDGLI------YFENLMDDSS-LSSSLNILEKDY-DNATRNKGELDERV 352
E G++ E L+ D + + +L+ LE +Y + TR ELDER
Sbjct: 287 AKSATAAEKCTFPGVVDLVSSRLLEGLVTDGNRMQRALSALETEYAQHYTRGGSELDERE 346
Query: 353 FINEDDSLLGS------------------------GSLSGGAVNITGAKRKFDSLASPVK 388
F+ D + S GSL G + T + S +P
Sbjct: 347 FLFTDFTKFASPRFSPRHMQSAVMKLRAGPLPIRQGSLLGPGAHTTASYAISPSSMNPKT 406
Query: 389 TITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERF 448
++ + R + P + G + VTPVS M+T+ WLR + L ++PS + R+
Sbjct: 407 SLLA-----RMHSPLPK-LNLGVETGPPVTPVSEIMSTSAWLRGITASLAAEPSPSVMRY 460
Query: 449 LK--------------SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDN 494
L + + +R ++ I P E + L L+
Sbjct: 461 LAEVAVPPDGEQGACVTVTLSAAEQLNQRVQELVSCIMP-----EEKIPSLLGSFPLLQP 515
Query: 495 IWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHK 554
+RR+E K+YY LE + AE + +TSLL+ +FHR ++ACSAE+V A ++
Sbjct: 516 SLVSERRIEVTKVYYLSLERILQAEEKNNGVAGVTSLLSAGKFHRALVACSAEVVTACYR 575
Query: 555 TVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 614
V+ FP VL+ I AFDL+K+I+ F+R +LPR+L+RHL +EE++LES+ WE S
Sbjct: 576 MVSCTFPKVLDALHIKAFDLAKMIQCFVRSITTLPRDLKRHLFLVEEKILESLAWEADSP 635
Query: 615 MYNSL--TVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQ 672
+Y+ + TVA+ L L+ AT + ++ + + P
Sbjct: 636 LYSLICSTVAQDEL----------------LEECATFEDDTTD--KTMQAPKSLVLIPDT 677
Query: 673 NGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKS---KPLPPPLQSAFASPTRP 729
+ S KRP S ++E F+ K R+ G + + LPP + + F
Sbjct: 678 SASPLSTKRP---QDSNVLE---FSPVKKARMEGSQHAVHRYLRKLPPCIGAKFVESAHT 731
Query: 730 NPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ----QIRESVYCLFQQILNQ 785
+ CA +N F CK+ KLAA R+ + + S + VY + L
Sbjct: 732 D------GCA-AALNHFCCKVLKLAAFRLAVLCDNFDFSPLQRLDVNTKVYQTIEHALFF 784
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWAS- 843
+T LF+NRHIDQIIL YG K+ +L ++FREII +YRKQPQ +P +FRSV V+ ++
Sbjct: 785 QTHLFYNRHIDQIILSALYGFCKVHRLAQVSFREIIAHYRKQPQAQPSIFRSVVVEQSNP 844
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELG 877
+ Q GR DII FYN++FVP +K L+ G
Sbjct: 845 SLQVGR----RADIIAFYNQVFVPCMKSFLLRSG 874
>gi|213982839|ref|NP_001135587.1| retinoblastoma-like 1 (p107) [Xenopus (Silurana) tropicalis]
gi|195539849|gb|AAI68105.1| Unknown (protein for MGC:186044) [Xenopus (Silurana) tropicalis]
Length = 1048
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 296/1107 (26%), Positives = 472/1107 (42%), Gaps = 220/1107 (19%)
Query: 9 TASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGM 68
T ++NS S+ G +A + +L LC+ L++D+ T E I+ F T + S G
Sbjct: 8 TEASNS-SDGGPGEAVQEQLETLCRE-LNLDQETGAETIRDFTRT----WSTYSLEGEV- 60
Query: 69 PEEAERFWFAFVLYLVRR--LSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQ 126
+ W A LY R + G+ + +G N +L ILR KL+++ FF ++ +
Sbjct: 61 -----KHWLACALYAACRKGVIPTVGKGIMEG---NGVSLTRILRSAKLSLIQFFNKMKK 112
Query: 127 FLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDAN 180
++ +SN+ E R + L+ NF +++ K ++ I+RE F P
Sbjct: 113 WI-----DMSNL---PQEFRERVERLERNFEVATVIFKKFEPIFREIFQNPHEEPPRLPR 164
Query: 181 GDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHV--- 237
KQ ++ D F W LF+ + + DLV + L+ L ++ HV
Sbjct: 165 SRKQRRLQCSA---KDLFSFCWTLFVYSKGNFCLIGDDLVNSYHLLLCCLDLIYAHVLQC 221
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVD---LIASLCSIYDTSEDDLRKIMEKTNTLIADILKK 294
P + N +++ D +I +LC +YD + + I E L
Sbjct: 222 PNKEDLLNPSFTAKLPALDPSSEDAPCIIRALCELYDGIFVEAKGIKEHYFKPYISKLYD 281
Query: 295 KPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFI 354
K C L+D SS + + L K+Y+ KG+ DERVF+
Sbjct: 282 KKILKGAC------------------LLDVSSFTDNNKSLNKEYEEYVLTKGDFDERVFL 323
Query: 355 NEDDSLLGSGSLSGGAVNITGAKRKF-----DSLASPVKTITSPLSPH--RSSASHPNGI 407
D A G+ RKF + +P K + S L H R + P+
Sbjct: 324 GVD------------AEEEIGSPRKFVVEFPMGICTPRKQMESNLQQHFERKRSFAPSTP 371
Query: 408 AGG----ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR 463
G V+TPVS+A L++++ L + PS +L KSC ++ +V+
Sbjct: 372 LTGRGYLKEEPTVITPVSSATQCVSRLQSMVAGLRNAPSEQLIEVFKSCVRNPLENVL-- 429
Query: 464 AHIILEAIFPSSGLGER-C--VTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEA 520
+I+ + +G R C T S + +A R A LY++VLE + E+
Sbjct: 430 -NIVRD-------IGRRFCHHYTQSTEDQPGSHIDFAVNRWKLAEILYFKVLETIVVQES 481
Query: 521 QVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIES 580
+ LH K+LT+LL + FH+ ++AC E+VL + + FP +E ++AF KVIE
Sbjct: 482 KRLHGKDLTALLEQDIFHQSLIACCLEIVLFAYSS-PRTFPWTIEVLNLSAFYFYKVIEV 540
Query: 581 FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEI---------- 630
FIR E+ L R++ +HLN++EE++LES W S ++ L V + E
Sbjct: 541 FIRSEDGLSRDMVKHLNTIEEQILESRAWTSDSVLWVHLDAVDNVPTCEEVIIPSNFETG 600
Query: 631 NRLGLLADPM--------PSLDAIATHINFS----SGGLSPVHSLHKHETSPGQNGDIR- 677
N G+ PM P L + T + S LSP+ S+H +SP R
Sbjct: 601 NEAGVGHLPMMPASPIVHPRLKEVRTDLGGSFRRDCQPLSPI-SVHDRYSSPAAGSAKRR 659
Query: 678 -----SPKRPCTDYRSV--LVERNNFTSPVKDR------------LLGLNN--------- 709
P+ D + + SP D+ + GL N
Sbjct: 660 LFGDDCPREQTVDKITTPDITRIRIALSPSPDKTAQSIGQTIAIPVQGLANESVKSLFLP 719
Query: 710 LKSKP------LPPPLQS-AFASP-TRPNPGGGGETC-------AETG-INIFFCKINKL 753
+K+ P +P PL + A SP T+ G E+C +TG + +FF K+ L
Sbjct: 720 MKTSPPQSENYVPVPLTAQALISPLTKRQLGRMPESCPTSARKPKKTGSLALFFRKVYHL 779
Query: 754 AAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLN 813
A+VR+ + +L +S +R ++ LF L T L +RH+DQ++LC Y +AKIS+
Sbjct: 780 ASVRLRDLCLKLDVSNDLRRKIWTLFVYSLVHCTDLMKDRHLDQLLLCAVYIMAKISKEE 839
Query: 814 LTFREIIYNYRKQPQCKPQVFRSVF---VDWASARQSGRSEQ------------------ 852
F +I+ YR QPQ V+RSV + AS ++ S+
Sbjct: 840 RLFHDIMKCYRNQPQANSHVYRSVLLKRIPQASGDETSTSQDVEMTARNSSDSHPTPSGF 899
Query: 853 --------DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPK 904
+ D+ITFYN ++V V+ ++ S +H D P P SP
Sbjct: 900 TGSPCGNAERGDLITFYNNVYVERVRSFALKFA-----------STQDHLMDAP-PLSP- 946
Query: 905 VSVFPALPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSK 962
FP++ +SP++VS H++YVSP + S +L H++ Y SPSK
Sbjct: 947 ---FPSIKQQAISPRRVSQQHSIYVSPHKNS--GSLTPHTALLY--------KFNGSPSK 993
Query: 963 DLTDINHRLNSNRRVRGTLNFDDVDVD 989
L DIN L +R R + D D D
Sbjct: 994 SLQDINSMLKQEQRSRKRIIAIDSDTD 1020
>gi|147905768|ref|NP_001084880.1| retinoblastoma-like 1 (p107) [Xenopus laevis]
gi|47123211|gb|AAH70856.1| MGC84607 protein [Xenopus laevis]
Length = 998
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 275/1033 (26%), Positives = 440/1033 (42%), Gaps = 202/1033 (19%)
Query: 81 LYLVRRLSEKNGEN-LQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIY 139
+ LV +S+K N ++ N +L ILR KL+++ FF ++ +++ ++
Sbjct: 16 MCLVCSMSKKRHTNSWKRNHGGNGVSLTRILRSAKLSLIQFFNKMKKWI--------DMS 67
Query: 140 GADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSA--AASTS 191
E R + L+ NF +++ K ++ I+RE F P KQS
Sbjct: 68 NLPQEFRERVERLERNFEVATVIFKKFEPIFREIFQNPHDEQPRLPRSRKQSILFCRRLQ 127
Query: 192 GYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHV---PVRFRNFNIHD 248
+ D F W LF+ + + DLV + L+ L ++ HV P + N
Sbjct: 128 CSVKDLFSFCWTLFVYSKGNFCLIGDDLVNSYHLLLCCLDLIYAHVLQCPNKEDLLNPSF 187
Query: 249 SSRFV--KKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSE 305
+++ S +I +LC +YD + + I E IA + KK + + C
Sbjct: 188 TAKLALDSSSEDTPCIIGALCELYDGISVEAKGIKEHYFKPYIAKLHDKKILKGA-C--- 243
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGS 365
L+D S + + L K+Y+ KG+ DERVF+ D
Sbjct: 244 ---------------LLDVSCFTDNNKSLNKEYEEYVLTKGDFDERVFLGVD-------- 280
Query: 366 LSGGAVNITGAKRKFDSL----ASPVKTITSPLSPH----RSSA-SHP-NGIAGGATSKM 415
A G+ RKF +P K + L H RS A S P G +
Sbjct: 281 ----ADEEIGSPRKFVEFPIGNCTPRKQMECNLQQHFEKKRSFAPSTPLTGRGYLKEEQT 336
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
V+TPVS+A L++++ L + PS +L KSC ++ +V+ +I+ +
Sbjct: 337 VITPVSSATQCVSRLQSMVAGLRNAPSEQLIEVFKSCVRNPIENVL---NIVRD------ 387
Query: 476 GLGERCV---TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL 532
+G R V T S + +A R A LY++VLE + E++ LH K+LT+LL
Sbjct: 388 -IGLRFVDHYTQSTEDQPGSHIDFAVNRWKLAEILYFKVLETIVVQESRRLHGKDLTALL 446
Query: 533 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
+ FH+ ++AC E+VL + + FP +E ++AF KVIE FIR E+ L R++
Sbjct: 447 EQDIFHQSLIACCLEIVLFAYSSPKT-FPWTIEVLKLSAFYFYKVIEVFIRSEDGLSRDM 505
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE---------------INRLGLL- 636
+HLN++EE++LES W S ++ L V + E + L ++
Sbjct: 506 VKHLNTIEEQILESRAWTSDSVLWVHLDAVDDVPTCEEVIIPSNFETGNEALVGHLPMIP 565
Query: 637 ADPM--PSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIR------SPKRPCTD--- 685
A P+ P + + LSP+ S+H +SP R P+ P D
Sbjct: 566 ASPIVHPRVKDLGGSYRRDCQPLSPI-SVHDRYSSPAAGSAKRRLFGDDCPREPAADKIT 624
Query: 686 ---------------YRSVLVERNNFTSPVKDRLLGLN-----NLKSKP------LPPPL 719
++V + PV+ L +K+ P +P PL
Sbjct: 625 TPDITRIRIAISPSPVKTVYPIGHAVAIPVQGVALETGKSLSVTMKTSPSQSENSVPVPL 684
Query: 720 QS-AFASP-TRPNPGGGGETC-------AETG-INIFFCKINKLAAVRINAMVERLQLSQ 769
+ A SP T+ G ETC +TG + +FF K+ LA+VR+ + +L +S
Sbjct: 685 TAQALISPLTKHQLGRNLETCPTSARKPKKTGSLALFFRKMYHLASVRLRDLCLKLDVSN 744
Query: 770 QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQC 829
+R ++ LF L T L +RH+DQ++LC Y +AKIS+ F +I+ YR QPQ
Sbjct: 745 DLRRKIWTLFVYSLVHCTDLMKDRHLDQLLLCAVYIMAKISKEERLFHDIMKCYRNQPQA 804
Query: 830 KPQVFRSVFV--------DWASARQS-----------------------GRSEQDHVDII 858
V+RSV + D S Q G++E+ D+I
Sbjct: 805 NSHVYRSVLLKRLPQASEDETSTSQDVEMTASNSNDSHPTPSGFTGSPCGQAERG--DLI 862
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPD--MSP 916
TFYN ++V V+ ++ S +H D P P SP FP++ +SP
Sbjct: 863 TFYNNVYVERVRLFALKFSS----------STQDHLVDAP-PLSP----FPSIKQQAISP 907
Query: 917 KKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
++VS H++YVSP + S L H++ Y SPSK L DIN L +R
Sbjct: 908 RRVSQQHSIYVSPHKNS--GNLTPHTALLY--------KFNGSPSKSLQDINSMLKQEQR 957
Query: 977 VRGTLNFDDVDVD 989
R + D D +
Sbjct: 958 SRKRIIAIDSDTE 970
>gi|242075436|ref|XP_002447654.1| hypothetical protein SORBIDRAFT_06g011641 [Sorghum bicolor]
gi|241938837|gb|EES11982.1| hypothetical protein SORBIDRAFT_06g011641 [Sorghum bicolor]
Length = 251
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/263 (50%), Positives = 166/263 (63%), Gaps = 25/263 (9%)
Query: 673 NGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPG 732
N D RSPK C + R+ +VERN T P K ++ +LK+K L+S FASPT NP
Sbjct: 2 NADPRSPKGSCNESRNTVVERNLLTPPPKHHMVS-TSLKAKCHQ--LKSTFASPTVSNPV 58
Query: 733 GGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFN 792
GG E CA+ I IFF KI KLAAVRI + ER+Q ++ E VY +F IL+Q+T+LFFN
Sbjct: 59 GGNEKCADLAIQIFFSKILKLAAVRIRNLCERVQ-HVELTERVYNVFNHILDQQTTLFFN 117
Query: 793 RHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ 852
RHIDQ+ILCC YGVAK ++ L+F E++ YRK+ Q KP+VF +V++ R+
Sbjct: 118 RHIDQLILCCLYGVAKACKVELSFNELLNYYRKE-QWKPEVFENVYI-------GSRNSN 169
Query: 853 D------HVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 906
D HVDII FYNK+FVPA KP LV L +GT E N GP PGSPK S
Sbjct: 170 DVCTLVLHVDIIRFYNKVFVPAAKPFLVSLISSGTC------PEEKKNASGPIPGSPKPS 223
Query: 907 VFP-ALPDMSPKKVSATHNVYVS 928
P LPDMS KKVSA+HNV VS
Sbjct: 224 ALPNNLPDMSLKKVSASHNVCVS 246
>gi|302845871|ref|XP_002954473.1| retinoblastoma-like protein [Volvox carteri f. nagariensis]
gi|300260145|gb|EFJ44366.1| retinoblastoma-like protein [Volvox carteri f. nagariensis]
Length = 1132
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 252/911 (27%), Positives = 384/911 (42%), Gaps = 175/911 (19%)
Query: 78 AFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMK---LNIVDFFKELPQFLVKSGPI 134
A +L++ R L Q G + F C I R++ ++++DFF+E+ + K
Sbjct: 70 ASLLFVARVLFAAQA---QGGRTVSNFG-CPISRIVAAAGISLLDFFREVNVVVSKLSSY 125
Query: 135 LSNIYGAD--WENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSG 192
G+ + + + KE V + +L+K YK+ L + KQ
Sbjct: 126 FEARGGSSRLFAQQAQLKENSETVVVMGLLAKKYKQDNFGMLL-HQLDFFKQIVL----- 179
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLV--TCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
+ GW FL LRI S F D+V +C L + AIL+ H P + D
Sbjct: 180 ------KLGWNAFLVLRIKLLSSFPDVVVRSCVELLPCVFAILVSHAP------QLPDCL 227
Query: 251 RFVKKSNKGVDLIASLCS-IYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE---- 305
V + L+ SL + I ++ + L++ +L E E S
Sbjct: 228 SHVSGAEYRSALLKSLSAEICKADYSRVQARIPSVEALLSHVLTSAVPEWREAASHAQLE 287
Query: 306 -NL-------ENIDTDGLI---------YFENLMDDSS-LSSSLNILEKDY-DNATRNKG 346
NL E G++ E L+ D + + +L+ LE +Y + TR
Sbjct: 288 SNLAKSATAAEKCTFPGVVDLVSSKAGRLLEGLVTDGNRMQRALSALETEYAQHYTRGGS 347
Query: 347 ELDERVFINEDDSLLGS------------------------GSLSGGAVNITGAKRKFDS 382
ELDER F+ D + S GSL G + T + S
Sbjct: 348 ELDEREFLFTDFTKFASPRFSPRHMQSAVMKLRAGPLPIRQGSLLGPGAHTTASYAISPS 407
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
+P ++ + R + P + G + VTPVS M+T+ WLR + L +
Sbjct: 408 SMNPKTSLLA-----RMHSPLPK-LNLGVETGPPVTPVSEIMSTSAWLRGITASL----A 457
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAE---- 498
AE+ + + VMR + E P G CVT +L A ++ E
Sbjct: 458 AEVRDVAPLVNVQPSPSVMR---YLAEVAVPPDGEQGACVTVTLSAAEQLNQRVQELVSC 514
Query: 499 -----------------------QRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
+RR+E K+YY LE + AE + +TSLL+
Sbjct: 515 IMPEEKIPSLLGSFPLLQPSLVSERRIEVTKVYYLSLERILQAEEKNNGVAGVTSLLSAG 574
Query: 536 RFHRCMLACSAELVLATHKTVTMLF------PAVLERTGITAFDLSKVIESFIRHEESLP 589
+FHR ++ACSAE+V A ++ V+ F P VL+ I AFDL+K+I+ F+R +LP
Sbjct: 575 KFHRALVACSAEVVTACYRMVSCTFPKVCSWPQVLDALHIKAFDLAKMIQCFVRSITTLP 634
Query: 590 ---RELRRHLNSLEERLLESMVWEKGSSMYNSL--TVARPVLSAEINRLGLLADPMPSLD 644
R+L+RHL +EE++LES+ WE S +Y+ + TVA+ L + D L
Sbjct: 635 RSVRDLKRHLFLVEEKILESLAWEADSPLYSLICSTVAQDEL---LEECATFEDDTSFLP 691
Query: 645 AIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRL 704
A + L + P + S KRP +VL F+ K R+
Sbjct: 692 DTADKTMQAPKSLVLI---------PDTSASPLSTKRP--QDSNVL----EFSPVKKARM 736
Query: 705 LGLNNLKS---KPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKIN----KLAAVR 757
G + + LPP + + F + CA +N F CK+ KLAA R
Sbjct: 737 EGSQHAVHRYLRKLPPCIGAKFVESAHTD------GCA-AALNHFCCKVRKQVLKLAAFR 789
Query: 758 INAMVERLQLSQQIRES------VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ 811
+ + + S R VY + L +T LF+NRHIDQIIL YG K+ +
Sbjct: 790 LAVLCDNFDFSPLQRLDVNTKVWVYQTIEHALFFQTHLFYNRHIDQIILSALYGFCKVHR 849
Query: 812 L-NLTFREIIYNYRKQPQCKPQVFRSVFVDWAS----ARQSGRSEQDHVDIITFYNKIFV 866
L ++FREII +YRKQPQ +P +FRSV V+ ++ Q GR DII FYN++FV
Sbjct: 850 LAQVSFREIIAHYRKQPQAQPSIFRSVVVEQSNPSLQVGQVGR----RADIIAFYNQVFV 905
Query: 867 PAVKPLLVELG 877
P +K L+ G
Sbjct: 906 PCMKSFLLRSG 916
>gi|449269638|gb|EMC80395.1| Retinoblastoma-like protein 1, partial [Columba livia]
Length = 1005
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 266/1039 (25%), Positives = 425/1039 (40%), Gaps = 224/1039 (21%)
Query: 76 WFAFVLYLVRRLSE--KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G L +G N +L ILR +L+++ FF ++ +++
Sbjct: 7 WLACALYVACRKSRVPTVGSGLMEG---NGVSLTRILRSARLSLIQFFSKMKKWM----- 58
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGD--KQSAAAST 190
+SN+ E R + L+ NF +++ K ++ I+ + F P + +
Sbjct: 59 DMSNL---PQEFRERVERLERNFEVSTVIFKKFEPIFLDIFQNPYEETSKPLRSRKQRRV 115
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHV---PVR------- 240
D F W LF+ + + DLV + L+ L ++ + P R
Sbjct: 116 PCGAKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPS 175
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEA 299
F+ + + +K S +IA+LC ++D + + I E IA + +K
Sbjct: 176 FKGLPVGFHATEIKASADAPCIIAALCELHDGLLVEAKGIKEHYFKPYIAKLFDRK---- 231
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
++ E L+D + + + L K+Y+ G+ DERVF+ D
Sbjct: 232 ---------------ILKGECLLDLCNFTENNKALNKEYEEYVLTVGDFDERVFLGAD-- 274
Query: 360 LLGSGSLSGGAVNITGAKRKFDS---LASPVKT--ITSPLSPH----RSSA-SHP-NGIA 408
A G RKF + + P + L H RS A S P G
Sbjct: 275 ----------AEEEIGTPRKFPADVPVGKPAARAHVECHLQQHFEKKRSFAPSTPLTGRR 324
Query: 409 GGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIIL 468
+ V+TPV++A + L+ ++ L + PS +L +SC + VM R I
Sbjct: 325 YLREKEAVITPVASATQSVSRLQNMVAGLKNAPSEQLIAIFESCARSPVGSVMSRVKEIG 384
Query: 469 EAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNL 528
E S T G+++ +A R A LYY++LE + E + LH K+L
Sbjct: 385 ETFCRSYTQS----TAEQPGSHI---DFAVNRFKLAEILYYKILETIMVQETRRLHGKDL 437
Query: 529 TSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESL 588
T+LL + FHR ++AC E+VL + + FP ++E + F KVIE IR EE L
Sbjct: 438 TALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFHFYKVIEVLIRSEEGL 496
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR---PV---------LSAEINRLGLL 636
R++ +HLNS+EE++LES+ W + S+++++L + P A +GL
Sbjct: 497 SRDMVKHLNSIEEQILESLAWTRDSALWSALQASENKVPTCEEVIFPSNFEASNGGVGLG 556
Query: 637 ADPM----PSLDAIATHINFSSGG--------LSPVHSLHKHETSPGQNGDIR------S 678
PM P + + GG LSP+ S+H+ +SP R S
Sbjct: 557 HLPMMPISPIIHPRVKEVRTDLGGSLRRDVQPLSPI-SVHERYSSPTAGSAKRRLFGDDS 615
Query: 679 PKRPCTDYRSVLVERNNFT-SPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPG----- 732
PK +L E T SP + N+ P Q+ T PG
Sbjct: 616 PKE--MQMEKILTEGTKLTISPASS--IAAENMSVS----PGQTVLTMTTATVPGKMGQK 667
Query: 733 ------------GG----------GETC-AETGIN--------------------IFFCK 749
GG G+ C E +N +F+ K
Sbjct: 668 VTVPLHGIASDMGGITLIPISMNFGQPCKVEAQVNQAPELHLSAASKPRRTGSLALFYRK 727
Query: 750 INKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKI 809
+ LA+VR+ + +L +S +R ++ F+ L L +RH+DQ++LC FY +AK+
Sbjct: 728 VYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKV 787
Query: 810 SQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA--------------------RQSGR 849
++ TF++I+ +YR QPQ V+RSV + SA G
Sbjct: 788 TKEERTFQDIMKSYRNQPQANSHVYRSVLLKSVSADAQLDKNAKQDVEMREESPVETGGS 847
Query: 850 SEQDHV------------DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDG 897
S Q D+I FYN ++V VK A+K + V+ +H D
Sbjct: 848 SGQSAAESSSELETEERGDLIKFYNAVYVARVKSF---------ALKYD-VTNQDHVVDA 897
Query: 898 PCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTH 955
P P SP FP + SP+++S H++YVSP K A ++ S Y G
Sbjct: 898 P-PLSP----FPHIKQQAGSPRRISQQHSLYVSP---HKNGACLTPRSALMYKFSG---- 945
Query: 956 AYQSPSKDLTDINHRLNSN 974
SPSK L DIN+ +
Sbjct: 946 ---SPSKSLKDINNMIKQG 961
>gi|194578849|ref|NP_001124082.1| retinoblastoma-like protein 1 [Danio rerio]
gi|190338209|gb|AAI62986.1| Rbl1 protein [Danio rerio]
Length = 1058
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 271/1089 (24%), Positives = 465/1089 (42%), Gaps = 214/1089 (19%)
Query: 13 NSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEA 72
++ES + + + LC+ L++DE T E ++ FR +I N E
Sbjct: 7 DTESVRSADGSIRSNFEALCQE-LNMDEETAAEALQNFR-----------SIWNTYTLEG 54
Query: 73 ERF-WFAFVLYLVRRLSE--KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLV 129
+ W A LY R S G + +G N +L ILR KL+++ FF ++
Sbjct: 55 DVMHWLACSLYAACRKSSIPTVGRGVMEG---NCVSLTRILRSAKLSLIQFFSKM----- 106
Query: 130 KSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAS 189
K ++N+ D+ +R+ L+ NF +++ + ++ I+ + F + + +
Sbjct: 107 KKWSDMANL-CQDFRSRI--GRLERNFEVSTVIFRKFEPIFLDMFQNPQSEPPRMPRSRK 163
Query: 190 ---TSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH-VPVRFRNFN 245
+ISD +F W LF+ + + DLV + L+ L ++ + + R
Sbjct: 164 HRRLPCHISDVFKFCWTLFVYTKGNFHMIGDDLVNSYHLLLCCLDLVFCNALMCSNRKDL 223
Query: 246 IHDSSRFVKKSNKGVD----LIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEAS 300
I+ + R + K + + +I LC ++D + + I E I + +K+ +
Sbjct: 224 INQNFRGLPKDTENLKEMPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKRMLKG- 282
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DS 359
D + L L+D + + + +DY+ G+ DERVF+ D D
Sbjct: 283 ----------DVETLT---ELLDTPNFQDNNKAINRDYEEFVLTVGDFDERVFLGADADE 329
Query: 360 LLG----------SGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
+G SG LS ++ F+ S + +PL+ R
Sbjct: 330 EIGTPRKSPAEPPSGHLSARMQVENNLQQHFEKTRSLAPS--TPLTGRRYLKE------- 380
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+++VTPVS+A + L++++ L + PS L + SC ++ T ++ R + E
Sbjct: 381 ---KEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALLQIFNSCSRNPTESILNRVKTLGE 437
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
F + T L GA+ MD +AE+R A LY+++LE + T E + L K+
Sbjct: 438 K-FKQAYTNP---TDDLPGAH-MD--FAEKRLKLAEILYFKILENVMTQEMKRLQGKDWA 490
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
LL E H +LAC E+VL ++ + FP +LE I F KVIE FIR EE L
Sbjct: 491 VLLEQEVLHCSLLACCLEVVLFSYSS-QRTFPWILEIFQIPPFYFYKVIEVFIRSEEGLS 549
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR---PVLSAEIN--------------- 631
R++ +HLNS+EE++LES W + S+++N+L P + E+N
Sbjct: 550 RDMVKHLNSIEEQVLESRAWTRDSALWNALNKDNNKVPTVE-EVNFPSNFDTGNNAGGPT 608
Query: 632 RLGLLA-DPM--PSLDAIATHINFSSGG---LSPVHSLHKHETSPGQN-------GDIRS 678
L L+A P+ P L + T + S+ SP+ SLH +SP GD
Sbjct: 609 HLPLVALSPIIHPRLREVRTGLGSSARKDVPQSPI-SLHDRYSSPAAGSAKRRLFGDDAP 667
Query: 679 PKRPCTDYRSVLV-------ERNNFTSPVKDRLLGLNNLKSKPLPP-------------- 717
P+ P + E T+ V G + PLP
Sbjct: 668 PQSPVKRISVTPIKIIPSGMENQTTTTTVLSMATGNGQQLTIPLPVVKNEAGGITVIQLQ 727
Query: 718 -----PLQSAF---ASPTRP-----------NPGGGGETCAETGINIFFCKINKLAAVRI 758
PL + ASP+RP P + + +FF K+ LA+VR+
Sbjct: 728 ASDMNPLTAQVLLTASPSRPALAAPAISSDSQPPPANKPRRTGSLALFFRKVYHLASVRL 787
Query: 759 NAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFRE 818
+ +L +S ++R ++ F+ L T L +RH+DQ++LC Y +++I++ TF++
Sbjct: 788 RDLCLKLDISSELRGKIWTCFEHSLLHCTDLMKDRHLDQLLLCAVYIISRITKEEHTFQD 847
Query: 819 IIYNYRKQPQCKPQVFRSVFV----------------------------------DWASA 844
I+ YR QPQ V+RSV + D A
Sbjct: 848 IMKCYRTQPQANSHVYRSVLIKRRPKVQQADENMEVDPPADQSNERTDQAANERTDQADR 907
Query: 845 RQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPK 904
Q+ ++ D+I FYN I+V ++ + +S +++ + P P SP
Sbjct: 908 TQTVFESEERGDLIQFYNNIYVSKMRSFAFKYA----------LSTLDNRMEAP-PLSP- 955
Query: 905 VSVFPALPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSK 962
FP++ +SP++VS H+++VSP + S + ++ S+ Y G SPSK
Sbjct: 956 ---FPSVRSHTLSPRRVSQKHSIFVSPHKNS---SSLTPSTAYTYRFTG-------SPSK 1002
Query: 963 DLTDINHRL 971
+L+DIN +
Sbjct: 1003 ELSDINQMI 1011
>gi|242075386|ref|XP_002447629.1| hypothetical protein SORBIDRAFT_06g010020 [Sorghum bicolor]
gi|241938812|gb|EES11957.1| hypothetical protein SORBIDRAFT_06g010020 [Sorghum bicolor]
Length = 288
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 182/297 (61%), Gaps = 25/297 (8%)
Query: 260 VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTD------ 313
+DLIASLC Y SE+ L+++M+K++ I D+ K ASECK+ENL+ IDT
Sbjct: 1 MDLIASLCHNYHASEERLKEMMDKSHKAIEDVFGMKALSASECKTENLDKIDTGMEPFIT 60
Query: 314 -GLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVN 372
GL+YF+ L+D S+L +EK ++ ++G+LD + + +D + + +LSG + N
Sbjct: 61 YGLMYFKGLIDMECFQSNLEKMEK-LCSSNSSEGKLDFKSILINNDYIPCAENLSGDSTN 119
Query: 373 ITGAKRKFDSLASPVKTI-------TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
+ +KR F+ LASP KTI +SPLSP S G+ + +TPV++AMT
Sbjct: 120 LGHSKRVFEILASPTKTIKNMPTIPSSPLSPATS----------GSVKIVQMTPVTSAMT 169
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGS 485
TAKWL VI LP KPS++L++FL SCD+D+T V R I+LEAIFP+ + + S
Sbjct: 170 TAKWLHEVISSLPEKPSSKLQQFLSSCDRDLTNAVTERVSIVLEAIFPTKSSADGGGSLS 229
Query: 486 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCML 542
AN+ WAE R++EA KLYYRVLEA+C AE Q + NLT LL+NER H L
Sbjct: 230 HNCANVFGIPWAEARKMEASKLYYRVLEAICRAELQNSNVNNLTPLLSNERLHETKL 286
>gi|350594907|ref|XP_001925314.4| PREDICTED: retinoblastoma-like protein 1 [Sus scrofa]
Length = 979
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 248/1025 (24%), Positives = 437/1025 (42%), Gaps = 184/1025 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF-WFAFVLYLVRR 86
L LC+ L++DE + E L + +AI E E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEA-----------LDDFTAIRGTYSLEGEVIHWLACSLYVACR 68
Query: 87 LS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 69 KSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFR 119
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYH 198
R+E L+ NF +++ K ++ I+ + F P KQ + + +
Sbjct: 120 ERIE--RLERNFEVSTVIFKKFEPIFLDIFQSPYEEPPKLPRSRKQRRIPCS---VKELF 174
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHD 248
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 175 NFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDF 234
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 307
+ + + +IA LC ++D + + I E I+ + +K
Sbjct: 235 HTADFRAPEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------ 282
Query: 308 ENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLS 367
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 -------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD---------- 325
Query: 368 GGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KM 415
A G RKF A P+ +T+ ++ + H A S +
Sbjct: 326 --AEEEIGTPRKFTGDA-PLGKLTAQVNVECNLQQHFEKKTSFAPSTPLTGRRYLREKEA 382
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
V+TPV++A + L++++ L + PS +L +SC ++ ++M+ I EA
Sbjct: 383 VITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIVKGIGEAF---- 438
Query: 476 GLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
+ Q + +D +A R A LYY++LE + E + LH +++ LL +
Sbjct: 439 -CQHYTQSTDEQPGSHID--FAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQD 495
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
FH ++AC E+VL + + FP ++E + F KVIE IR EE L R++ +H
Sbjct: 496 IFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKH 554
Query: 596 LNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
LNS+EE++LES+ W S+++ +L + A+ +P+ + + NF +G
Sbjct: 555 LNSIEEQILESLAWSHDSALWEALQAS--------------ANKVPTCEEVIFPNNFETG 600
Query: 656 GLSPVHS-LHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKP 714
V L SP + ++ + TD S+ N + + +N +
Sbjct: 601 NGGNVQGHLPMMPMSPLMHPRVKEVR---TDSGSLRKGIANDAGEITLIPISVNTTQESK 657
Query: 715 LPPPL-------------QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAM 761
+ P+ Q+ +P G + + +F+ K+ LA+VR+ +
Sbjct: 658 VESPISLTAQSLIGASPKQTHLTKAQEVHPIGISKPKRTGSLALFYRKVYHLASVRLRDL 717
Query: 762 VERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIY 821
+L +S ++R ++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+
Sbjct: 718 CLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMK 777
Query: 822 NYRKQPQCKPQVFRSVFV-----------------------DWASARQ-----SGRSEQD 853
+YR QPQ V+RSV + D A + SG +++
Sbjct: 778 SYRNQPQANSHVYRSVLLKSIPREAMAYNKNLNGDFEMTDCDLEDATKTPDCSSGPVKEE 837
Query: 854 HVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPD 913
D+I FYN I+V VK A+K + +S +H + P P SP FP +
Sbjct: 838 RGDLIKFYNTIYVGRVKSF---------ALKYD-LSNHDHVMEAP-PLSP----FPHIKQ 882
Query: 914 M--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRL 971
SP+++S H++YVSP K + + S Y G SPSK L DIN+ +
Sbjct: 883 QPGSPRRISQQHSIYVSP---HKNGSGPTPRSALLYKFNG-------SPSKSLKDINNMI 932
Query: 972 NSNRR 976
+
Sbjct: 933 RQGEQ 937
>gi|1666661|emb|CAA70428.1| retinoblastoma protein [Notophthalmus viridescens]
Length = 899
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 214/901 (23%), Positives = 382/901 (42%), Gaps = 171/901 (18%)
Query: 100 NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHL 159
ND F + +L+ LN+ F + + + I + + A L+ + L
Sbjct: 85 NDLTFTITELLKSTHLNVNMFTGYIKEMDISMDTITTKVNNA-------VTRLKTKYNTL 137
Query: 160 SILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDL 219
L + ++R++ F+ +N S + + + + W+ FL ++ DL
Sbjct: 138 CTLYQKFQRLFELIFIKEPSNVQISSDISPAALF-----KILWITFLLVKGSVLQMEDDL 192
Query: 220 VTCTNGLVSILA--ILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDL 277
V L+ + I I+ +P+ + S KS+K L
Sbjct: 193 VISFQLLLCVFTHYIKILPLPLLREPYK----SAISGKSDKAQ---TRSSRRGRNRNPHL 245
Query: 278 RKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI---- 333
K +E + +IL C+ + C + ++NI+ + F +D +S++ I
Sbjct: 246 SKQVESDE--VFEIL----CKENGCNMDEVKNINITTFVPF---LDSVGISTTNGIPEEP 296
Query: 334 -LEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITS 392
L K Y++ N +LD R+F+++D++L + GG V + +K D
Sbjct: 297 VLSKQYEDLYFNSKDLDARLFLDDDETLQPN---MGGCVELEKTPQKND----------- 342
Query: 393 PLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSC 452
P + P TPV TAM T + L + +PS L+ + +C
Sbjct: 343 ---PEEMNLIPPQ------------TPVRTAMNTIQNLLNSLASASDQPSPTLKAYFNNC 387
Query: 453 DKDVTTDVMRRAHIILEAIFP---SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYY 509
+ T + R + L IF + +G+ C + I QR ++L Y
Sbjct: 388 TSNPTRAIQEREN-NLGQIFKQKFAEAVGQAC-----------EEI-GYQRFKVGVRLAY 434
Query: 510 RVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT----MLFPAVLE 565
RV+EAM +E + L +N ++LL N FH +LACS E+V+AT+ +++ + FP +LE
Sbjct: 435 RVMEAMLKSEEKRLSVQNFSNLLNNSAFHESLLACSIEVVMATYGSISRETDLSFPWILE 494
Query: 566 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
I +D KVIESFI+ E SL RE+ +HL S E R++ES+ W S +Y + R
Sbjct: 495 VFKIEPYDFYKVIESFIKDEPSLTREMIKHLESCEHRIMESLAWRSESPIYELIRQPR-- 552
Query: 626 LSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTD 685
R G + P P +S P+ H H + +RSP+R
Sbjct: 553 -----EREGHVDQPEP-----------TSSLNQPLE--HNHTAADLYLSPLRSPRRNVPT 594
Query: 686 YRSV----LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAET 741
R++ + E NN + PLP P Q + T
Sbjct: 595 SRAIPTLSVPESNNVPA---------------PLPQPTQRS------------------T 621
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+++F+ K+ +LA +R+N + +L ++ ++ LFQ L L +RH+DQI++
Sbjct: 622 SLSLFYKKVYRLAYLRMNTLCSKLLPDHPELEHVIWTLFQHTLQNEYELMKDRHLDQIMM 681
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
C Y + K+ ++L F+ I+ Y++ P + F+ V + + H II F
Sbjct: 682 CSMYAICKVKAIDLRFKTIVTAYKELPNTNQETFKHVLI----------RDGQHDSIIVF 731
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP-KVSVFPALPDMSPKKV 919
YN +F+ +K +++ ++ +S + H P SP K+S SP ++
Sbjct: 732 YNLVFMQKLKTNILQYA----TLRNPTLSPIPH-----IPRSPYKIS-------NSPLRL 775
Query: 920 SATHNVYVSPLRT--SKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRV 977
+N+Y+SPL++ + L+S + + + + S ++ IN L+S+ R+
Sbjct: 776 PGGNNIYISPLKSPYKHPEGLLSPTKMTPRSRILVSIGEQFGTAEKFQKINQMLSSSERL 835
Query: 978 R 978
R
Sbjct: 836 R 836
>gi|348538760|ref|XP_003456858.1| PREDICTED: retinoblastoma-associated protein-like [Oreochromis
niloticus]
Length = 912
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 215/903 (23%), Positives = 368/903 (40%), Gaps = 176/903 (19%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILS 163
F L +L+ + LN+ F + + V I + + A +RL+ K V L++
Sbjct: 100 FTLTQVLKAVCLNVKQFIDLVRKLDVNLDTISTKVNSA--LSRLDKK----YDVMLALYQ 153
Query: 164 KSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCT 223
+ K + F L SD G + R W +FL + A DLV
Sbjct: 154 RFEKTCKKIFNLTSD-------------GKERETVRTCWTMFLLAKGRALQMEDDLVISF 200
Query: 224 NGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
L+ L ++I P K + + + S + S+ R + +
Sbjct: 201 QLLLCTLELIIKRCPPDLLQ-------PLYKSAISKIQSPPTRTSRRNQSKTKSRAVEPE 253
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNA 341
+ + + L C+ +EC +E ++N+ + F MD S +N +++ Y+
Sbjct: 254 VDVQLLETL----CKENECSAEEVKNVYQTSFMAFLESMDLSRSPDFPQVNDIDQQYEEH 309
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
++D R+F N D+++L V I+ +R +P K +
Sbjct: 310 YLKSRDIDGRMFFNGDETVLAP------KVEISQVER------TPKKNL----------- 346
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
S +G+ TP+ AMT+ + LR + +PSA L + K C D T DV
Sbjct: 347 SDEDGLLVPPQ-----TPIRAAMTSIQLLRGDLTSSGDQPSANLVTYFKHCTVDPTQDVQ 401
Query: 462 RRAHIILEAIFPSSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE 519
+R + + G +G CV ++ QR ++LYYRV+E M +E
Sbjct: 402 KRLETLGQVFSQRFGQAVGPHCV------------VYGRQRFTLGVRLYYRVMEEMLKSE 449
Query: 520 AQVLHAKNLTSLLTNERFHRCMLACSAELVLATH-----------------KTVTMLFPA 562
+ L +N + LL + FH +LAC+ E+V+AT+ + FP
Sbjct: 450 EKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGESSFKNGGYSHGGADSAETDVCFPW 509
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+L +TAFD KVIESFI+ + +L +E+ +HL + E ++E + W GS ++ L
Sbjct: 510 ILNVFNLTAFDFYKVIESFIKADPTLSKEIVKHLETCENLIMERLAWRTGSPLFELLKQE 569
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIR-SPKR 681
AE + T NFS P+ H H D+ SP R
Sbjct: 570 HESGGAE---------------QVETPANFS----QPLQ--HNHTA-----ADLYLSPMR 603
Query: 682 PCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAET 741
P R + E ++ TS P A + P RP
Sbjct: 604 P--GLRVLPPESSSQTS-----------------SQPASQATSQPPRP--------LKSN 636
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+++F+ K+ +LA R+ + L S + ++ LFQ L L +RH+DQ+++
Sbjct: 637 SLSLFYKKLYRLAYTRLKMLCSYLLSSHPEFEPIIWTLFQHTLQHEYELMRDRHLDQLMM 696
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
Y + K+ ++L F+ I+ Y+ + F+ V + +E + II F
Sbjct: 697 SAMYAICKVKSVDLRFKTIVTAYKNMANTSQETFKHVLI----------TEGHYDSIIVF 746
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN++F+ +K +++ + R ++ PC SP FP SP +V
Sbjct: 747 YNQVFMQKLKTNILQYA-------STRPPTLSPIPQIPC--SP--YKFPN----SPLRVP 791
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRG 979
++NVY+SPL++++M I +GES PS IN +N S+R ++
Sbjct: 792 GSNNVYISPLKSTRMSPGIMTPRSKMLVSIGESF----GPSNRFQKINQMVNSSDRSLKR 847
Query: 980 TLN 982
TL+
Sbjct: 848 TLD 850
>gi|89886547|gb|ABD78137.1| retinoblastoma susceptibility protein [Xiphophorus maculatus]
Length = 912
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 217/943 (23%), Positives = 377/943 (39%), Gaps = 193/943 (20%)
Query: 66 NGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELP 125
+ +P +R W A + ++ ++ GS F + +L+ + LN+ F +
Sbjct: 75 DKVPGSQQRLWGACLFVII--------TDMDTGS----FTVTQVLKAVSLNLKQFLALVR 122
Query: 126 QFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQS 185
Q V I + A RLE K V L++ + K F L SD
Sbjct: 123 QLDVNLDTISMKVNSA--LTRLEKK----YDVMLALYQRFEKTCKNIFVLTSD------- 169
Query: 186 AAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFN 245
G + R W +FL + A DLV L+ L + I + +
Sbjct: 170 ------GRERETMRTCWTMFLLAKGRALQMEDDLVISFQLLLCTLELFI-------KRCS 216
Query: 246 IHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE 305
+ + V + S + S+ R + + + + L C+ +EC E
Sbjct: 217 SDQLQSLYQSAISKVLSPPTRTSRRNQSKAKSRPSEPEVDAQLLETL----CKDNECNFE 272
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSL-----NILEKDYDNATRNKGELDERVFINEDDSL 360
++N+ + F +D + LS S+ N + + Y+ ++D R+F + D+++
Sbjct: 273 EVKNVYQTSFLAF---LDSTDLSRSIDFPQVNDVNQQYEELYLKSRDIDGRLFFDGDETV 329
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
L V T K + + P+ P + TP+
Sbjct: 330 LPP-KFEISKVERTPKKNQPEE--------DGPMIPPQ-------------------TPI 361
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG--LG 478
AMT+ + LR + +PS L + K+C D T DV +R + + G +G
Sbjct: 362 RAAMTSIRMLRGDLPSNGDQPSTTLTTYFKNCTVDPTQDVQKRLETLGQVFSQKFGEAVG 421
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
CV ++ QR ++LYY+V+EAM +E + L +N + LL + FH
Sbjct: 422 PHCV------------VYGRQRFALGVRLYYKVMEAMLKSEEKRLSVQNFSKLLNDFTFH 469
Query: 539 RCMLACSAELVLATHKT------------VTMLFPAVLERTGITAFDLSKVIESFIRHEE 586
+LACS E+V+AT++ + FP +L ++AFD KVIESFI+ E
Sbjct: 470 TSLLACSLEVVMATYEESSFKNGGSDQTGTNLCFPWILNVLNLSAFDFYKVIESFIKAEP 529
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAI 646
+L +++ +HL + E ++E + W GS ++ L +AE +
Sbjct: 530 TLSKDIIKHLETCENLIMERIAWRTGSPLFELLKQEHASAAAE---------------PV 574
Query: 647 ATHINFSSGGLSPVHSLHKHETSPGQNGDIR-SPKRPCTDYRSVLVERNNFTSPVKDRLL 705
T +FS P+ H H D+ +P RP + R+L
Sbjct: 575 ETPASFS----QPLQ--HSHTA-----ADLYLTPTRPAS------------------RVL 605
Query: 706 GLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERL 765
++ P PP Q + T P +++F+ K+ +LA R+ + L
Sbjct: 606 PPDS----PATPPQQPTASQSTSQAPCQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCSYL 661
Query: 766 QLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYR 824
S ++ ++ LFQ L L +RH+DQ+++ Y + K+ ++L F+ I+ Y+
Sbjct: 662 LSSHPELEPIIWTLFQYTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKSIVSAYK 721
Query: 825 KQPQCKPQVFRSVFVDWASARQSGRSEQDHVD-IITFYNKIFVPAVKPLLVELGPAGTAM 883
+ F++V + + H D II FYN++F+ +
Sbjct: 722 NMTNTNQETFKNVLII-----------EGHYDSIIVFYNQVFM--------------QKL 756
Query: 884 KTNRVSEVNHNNDGPCPGSPKVSVFP----ALPDMSPKKVSATHNVYVSPLRTSKMDALI 939
KTN + H + P P SP + P LP+ SP +V ++N+Y+SPLR+S+M I
Sbjct: 757 KTNI---LQHASIRPPPLSP-IPQIPRSPYKLPN-SPLRVPGSNNIYISPLRSSRMSPGI 811
Query: 940 SHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTLN 982
+GES IN +NS R + T++
Sbjct: 812 MTPRSRMLVSIGESFGL----GNRFQKINQMVNSERSHKRTMD 850
>gi|46095209|gb|AAS80140.1| retinoblastoma tumor suppressor [Fundulus heteroclitus]
Length = 913
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 215/939 (22%), Positives = 372/939 (39%), Gaps = 177/939 (18%)
Query: 56 LLLANISAIGNGMPEEAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKL 115
LL + + P ER W A + V ++ G F + +L+ ++L
Sbjct: 65 LLWRTVQESMDKAPGSQERLWAACLFVTV--------TDMDVGC----FTVTQVLKAVRL 112
Query: 116 NIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL 175
N+ F + Q V I + + +RL E + + V L++ + K F L
Sbjct: 113 NLKQFLDVVRQLDVNLDTITTKV-----NSRLTRLEKKYD-VMLALYQRFEKTCKSIFVL 166
Query: 176 PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILII 235
D G + R W +FL + A DLV L+ L ++I
Sbjct: 167 TPD-------------GRERETMRTCWTMFLLAKGRALQMEDDLVISFQLLLCTLELII- 212
Query: 236 HVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK 295
+ + + + V + S S+ R + + + + L
Sbjct: 213 ------KRCSPDQLQPLYQSAVTKVQSPPTRTSRRSQSKAKSRPAEPEVDARLLETL--- 263
Query: 296 PCEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNATRNKGELDERVF 353
C+ +EC E ++N+ + F + MD S + + + Y+ ++D R+F
Sbjct: 264 -CKDNECNIEEVKNVYNTSFLAFLDSMDLSRAAGVPQAKDINRLYEEHYLKSRDVDGRLF 322
Query: 354 INEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS 413
+ D+S+L V I+ +R +P K P P
Sbjct: 323 FDGDESVLPP------KVQISQVER------TPKKN-----QPDEDGPMIPPP------- 358
Query: 414 KMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP 473
TP+ AMT+ + LR + +PSA L + K+C D T DV +R + +A
Sbjct: 359 ----TPIRAAMTSIQMLRGDLPSNGDRPSATLATYFKNCTVDPTQDVQKRLETLGQAFSQ 414
Query: 474 SSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
G G CV ++ +QR A++LYY+V+EAM +E + L +N + L
Sbjct: 415 KFGEAAGPHCV------------VYGQQRFGLAVRLYYKVMEAMLKSEEKRLSVQNFSKL 462
Query: 532 LTNERFHRCMLACSAELVLATHKT------------VTMLFPAVLERTGITAFDLSKVIE 579
L + FH +LACS E+V+AT++ + FP +L ++AFD KVIE
Sbjct: 463 LNDATFHTSLLACSLEVVMATYEESSFKNGGGDQTGTNLCFPWILNVLNLSAFDFYKVIE 522
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADP 639
SFI+ E +L +++ +HL + E ++E + W GS ++ L +AE
Sbjct: 523 SFIKAEPTLSKDIIKHLETCENLIMERIAWRTGSPLFELLQQEHASAAAE---------- 572
Query: 640 MPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSP 699
+ T +FS P+ H H + + + SP
Sbjct: 573 -----PVETTASFS----QPLQ--HNHTAA------------------------DLYLSP 597
Query: 700 VKDRLLGLNNLKS-KPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRI 758
V+ GL L S P PP Q + + P +++F+ K+ +LA R+
Sbjct: 598 VRQ---GLRVLPSDSPATPPQQPTASQSSAQAPCQAPRQPKSNSLSLFYKKLYRLAYTRL 654
Query: 759 NAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFR 817
+ L S ++ ++ LFQ L L +RH+DQ+++ Y + K+ ++L F+
Sbjct: 655 KTLCSYLLSSHPELEPIIWTLFQYTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFK 714
Query: 818 EIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELG 877
I+ Y+ + F++V + +E + II FYN++F+ +K +++
Sbjct: 715 SIVSAYKNMANTNQETFKNVLI----------TEGHYDSIIVFYNQVFMQKLKTNILQ-- 762
Query: 878 PAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDA 937
+ K S + P FP SP +V ++NVY+SPL+ S+M
Sbjct: 763 --HASTKPPPPSPIPQMPRSP-------YKFPN----SPLRVPGSNNVYISPLKNSRMSP 809
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
I +GES S IN +NS+ R
Sbjct: 810 GIMTPRSRMLVSIGESFGL----SNRFQKINQMVNSSER 844
>gi|198437827|ref|XP_002124769.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1023
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 249/1050 (23%), Positives = 450/1050 (42%), Gaps = 172/1050 (16%)
Query: 16 SNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF 75
S+ ++D E R DLC +++D+ T + + + K N + G+ +
Sbjct: 2 SSGDESDEDEQRFRDLCL-AVNMDKPTMESAWRSYENAKE----NYTLEGDCL------H 50
Query: 76 WFAFVLYLVRRLSEKNGENLQ-QGSNDNEFNLCHILRVMKLNIVDFFKELPQFLV--KSG 132
W LY R + + + + + + N +L +LR KL+ + F K++ ++L ++
Sbjct: 51 WLTCTLYSACRTNLSSVKTIAGKTAPSNCISLTKLLREAKLSFISFLKKMDKWLQMNQND 110
Query: 133 PILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSG 192
P+ S++ L+ +F +++ K Y+ +++ FL D + ++ S
Sbjct: 111 PLSSHVSA-----------LERSFHVSTVVFKKYQVVFKYVFLDPDDSKYQRPVRGSAKN 159
Query: 193 ---------------YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH- 236
D F W LF+ R F D + + L+ + AI + +
Sbjct: 160 PSRPRRNRQYRKLVCNPHDVFNFCWTLFVHARATEFRSISDEIVLSYQLL-LSAINLCYN 218
Query: 237 ------VPVRFRNFNIH------DSSRFVKKSNKGVDLIASLCSIY-DTSEDDLRKIMEK 283
V R + N D S + + D+IA L T + D + ++E
Sbjct: 219 NALNCSVDHRAQLLNPKFPGLPADWSTRTEPLTQNQDIIALLVEQQPGTGQLDEKFLIE- 277
Query: 284 TNTLIADILKKKPCEASECKSENLE-NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNAT 342
T + ++ S +SE L + + + L +N +SS S L Y+
Sbjct: 278 --TRVVNVHNWGKHVNSLLESEGLGLSGEQNSLFSPQNFETNSSAISKL------YEEYV 329
Query: 343 RNKGELDERVFINED-DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTIT-SPLSPHRSS 400
+G+ DERVF++++ DS LG+ + + LA + +PL+ +
Sbjct: 330 ITEGDFDERVFLHDEVDSELGTPIKCPPPAQTNLKQEVAEHLAKTNSMVQKTPLT----N 385
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
+ +G ++ +TPVS+ L+ ++ PS +L + C +D + +V
Sbjct: 386 REYLHGKGHNSSLNGSLTPVSSTCHDVMKLKKLLQSKTDGPSEKLAAIFRECTEDPSEEV 445
Query: 461 MRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEA 520
+R + E I ER G A AEQR A LYY +LE E
Sbjct: 446 KKRTDRLREII--KKKYMERGGKGGGIPAGT--PAIAEQRATMATVLYYHILEGSMIQEK 501
Query: 521 QVLHAK-NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 579
+ L+ K +L+ LL + FH + AC E+VL ++K M FP +L ++ + KVIE
Sbjct: 502 KRLNGKSDLSELLKRDDFHTLLFACCVEIVLCSYKAERM-FPWILSALDLSPYYFYKVIE 560
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR-PV-LSAEINR----- 632
IR E+ L +HLN +EE++LES+ W+ S+++ L P L E+N
Sbjct: 561 LVIRAEDGLWGPCIKHLNHIEEQILESLAWKSDSTLWQVLGNGESPAPLCEEVNHSQHIE 620
Query: 633 -----------LGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKR 681
GLL P + TH + + +L K E PG D S
Sbjct: 621 PSSADKSTGVNKGLLGPGTPK--SPPTHPRVKAVSEGEIGNLRKFE--PGTARDRFSSPS 676
Query: 682 PCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA-- 739
P + R + V+ + ++P +++ ++ P P ++ T +PGG T
Sbjct: 677 PGSAKRRLFVKDHLSSTPGTLKVVSMD----VPNSPGAKTYVVQQT--SPGGKPITVVSV 730
Query: 740 ----------ETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRT- 787
+TG + +FF K+ LA+VR+ + E+L + +R ++ F+ +++
Sbjct: 731 ANHADNVKPRKTGSLALFFRKVYHLASVRLRHLCEQLVIPPDLRAKIWTCFEYSVSKHAY 790
Query: 788 SLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ- 846
SL +RHIDQ+++C Y +AKI+Q + +F+EI+ YR QPQ V+R+V + +S+ +
Sbjct: 791 SLMRDRHIDQMLMCAVYVIAKITQHDHSFQEIMRCYRSQPQATSNVYRNVLIHRSSSPRL 850
Query: 847 ----------------------------SGRSEQDHVDIITFYNKIFVPAVKPLLVELGP 878
+G + + D+I FYNK++VP ++
Sbjct: 851 IPAQPPSRSMRSNSTIPRSDPSSPLPGSTGGGDGERDDLIQFYNKVYVPVMR-------- 902
Query: 879 AGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDAL 938
+K +V+H + P P+ + P SP+KV T N+Y+SPL+ + L
Sbjct: 903 --EYVKKFNSGDVSH-LEVPLSPMPRPRILP----QSPRKV--TDNIYISPLKNPSL--L 951
Query: 939 ISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
++ ++ + + ++SP+K L DIN
Sbjct: 952 MATNTDRHL-----DYNFHRSPAKRLRDIN 976
>gi|395829401|ref|XP_003787848.1| PREDICTED: retinoblastoma-like protein 1, partial [Otolemur
garnettii]
Length = 864
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 220/895 (24%), Positives = 378/895 (42%), Gaps = 157/895 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF---------LPSDANGDKQSAAASTSGYISD 196
R+E L+ NF +++ K + I+ + F LP KQ T + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFVPIFLDIFQNPYEEPTKLP---RSRKQRRIPCT---VKD 172
Query: 197 YHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FR---- 242
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 173 LFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPS 232
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASE 301
+FN D K S + +IA LC ++D + + I E I+ + KK
Sbjct: 233 DFNTAD----FKASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDKK------ 282
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSL 360
++ E L+D SS + + + K+Y+ G+ DER+F+ D +
Sbjct: 283 -------------ILKGECLLDLSSFADNSKAVNKEYEEYVLTVGDFDERIFLGADAEEE 329
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVT 418
+G+ G + K + A+ + RS A S P G + V+T
Sbjct: 330 IGTPQKFTGDTTLG----KLATQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAVIT 385
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PV++A + L++++ L + PS +L +SC ++ ++M+ G+G
Sbjct: 386 PVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIRNPLENIMKIV----------KGIG 435
Query: 479 ERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
E Q + +A R A LYY++LE + E + LH +++ LL +
Sbjct: 436 ETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQD 495
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++ +H
Sbjct: 496 IFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKH 554
Query: 596 LNSLEERLLESMVWEKGSSMYNSLTVA--RPVLSAEINRLGLLADPMPSLDAIATHINFS 653
LNS+EE++LES+ W S+++ +L + + E+N M L I+ H +S
Sbjct: 555 LNSIEEQILESLAWSHDSALWEALQASTNKVPTCEEVN--------MQPLSPISVHERYS 606
Query: 654 S-----------GGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVL------------ 690
S G P L + G I S T+ S+L
Sbjct: 607 SPTAGSAKRRLFGEDPPKDMLMDKIITEGTKLKIASSSSIATENISILPGQTLLTMATAT 666
Query: 691 ---VERNNFTSPVKDRL----------LGLNNLKSKPLPPPL----QSAFASPTRPNPGG 733
+ T P+ + +N + + P+ QS S +P
Sbjct: 667 VTGTTGHKVTIPLHGVANDAGEITLLPISMNTTRESKVKSPVSLTTQSLIGSSPKPTHLT 726
Query: 734 GGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILN 784
+ T I+ +F+ K+ LA+ R+ + +L +S ++R ++ F+ L
Sbjct: 727 KAQEVHPTVISKPKRTGSLALFYRKVYHLASARLRDLCLKLDVSNELRRKIWTCFEFTLV 786
Query: 785 QRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 787 HCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLL 841
>gi|449280345|gb|EMC87672.1| Retinoblastoma-associated protein, partial [Columba livia]
Length = 837
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 169/673 (25%), Positives = 293/673 (43%), Gaps = 151/673 (22%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSS-----LNILEKDY 338
T+T + ++L C+ +C + ++N+ I F ++ S + +S + +L K Y
Sbjct: 187 TDTKVIEVL----CKEHDCNLDEVKNVYFTSFIPF---LNSSGIVASNGLPEVEVLVKQY 239
Query: 339 DNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHR 398
D ++D R+F++ D++L + + +R +PL+
Sbjct: 240 DELYLKNKDIDARLFLDHDETL------QPDVITRSQLER-------------TPLN--- 277
Query: 399 SSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTT 458
N + TPV AM + L ++ KPS L R+ +C +
Sbjct: 278 ------NNPDEELNLILPQTPVRAAMNNIQQLIMILNSAADKPSDILNRYFNNCTVNPKD 331
Query: 459 DVMRRAHIILEAIFP---SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 515
+++R LE IF + +G+ C LQ L ++LYYRV+E+M
Sbjct: 332 SILKRVES-LEHIFKKKFAEAVGQGCAEIGLQRYKL------------GVRLYYRVMESM 378
Query: 516 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH-----------KTVTMLFPAVL 564
+E + L +N + LL + FH +LACS E+V+AT+ + FP +L
Sbjct: 379 LKSEEERLSVQNFSKLLNDNIFHTSLLACSIEVVMATYGRNASQSDGTSAETDVSFPWIL 438
Query: 565 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W+ GS +++ + ++
Sbjct: 439 NVFDLKAFDFYKVIESFIKAEPNLTREMIKHLERCEHRIMESLAWQSGSPVFDLIKQSK- 497
Query: 625 VLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCT 684
R G P P+ +N P+ H H + +RSPK+ +
Sbjct: 498 ------EREGQADQPEPT-----AALNL------PLQ--HNHTAADLYLSPVRSPKKKAS 538
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGET---CAET 741
PPP SA ++P PG +T T
Sbjct: 539 ------------------------------APPP--SATSAPD-AQPGVNPQTQRPQKST 565
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQII 799
+++F+ K+ LA +R++ + RL LS + ++ LFQ L L +RH+DQI+
Sbjct: 566 SLSLFYKKVYLLAYLRLHTLFFRL-LSDHPDLELLIWTLFQHTLQNEYELMRDRHLDQIM 624
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
+CC YG+ K+ ++L F+ I+ Y++ P + F+ V + E + II
Sbjct: 625 MCCMYGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI----------REGQYDSIIV 674
Query: 860 FYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV 919
FYN F+ +K +++ +NR + P P P+ P SP++V
Sbjct: 675 FYNLEFMQKLKTNILQYA-------SNRPPTL-----SPIPHIPRS---PYQFSNSPRRV 719
Query: 920 SATHNVYVSPLRT 932
A +N+Y+SPL++
Sbjct: 720 PAGNNIYISPLKS 732
>gi|410915598|ref|XP_003971274.1| PREDICTED: retinoblastoma-associated protein-like [Takifugu
rubripes]
Length = 913
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 200/879 (22%), Positives = 350/879 (39%), Gaps = 182/879 (20%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILS 163
F L +L+ + LN+ F + + V I + + A L+ + + L
Sbjct: 100 FTLTQLLKAVSLNVKQFLALVRKMDVNLDTISTKVNSA-------LSHLEKKYDVMLALY 152
Query: 164 KSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCT 223
+ +++ + F N +K++ R W +FL + A DLV
Sbjct: 153 QRFEKTCKSVFASVSENKEKETI------------RTCWTMFLLAKGRALQMEDDLVISF 200
Query: 224 NGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLC---SIYDTSEDDLRKI 280
L+ L I P ++ S+ +S G S S SE DL+
Sbjct: 201 QLLLCTLEFCIKRCPPDLLQ-PLYKSAISKVQSPPGRTARRSQSKAKSRLPESEVDLQ-- 257
Query: 281 MEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----LE 335
L K C+ ++C SE ++N+ F +D LS S ++ L+
Sbjct: 258 -----------LLKTLCQENDCNSEEVKNVYQTS---FSAFLDSLDLSGSAHLPQGKGLD 303
Query: 336 KDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLS 395
+ Y + D R+F++ D+++L V+++ +R ++ T+ P
Sbjct: 304 QQYQEHYLKSRDFDGRLFLDGDETVLVP------KVDMSQVERTPKKMSDEDSTLIPP-- 355
Query: 396 PHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD 455
TP+ AMT+ + LR + +PS L + K+C D
Sbjct: 356 ---------------------QTPIRAAMTSIQQLRGDLTSSGDQPSTNLATYFKNCTVD 394
Query: 456 VTTDVMRRAHIILEAIFPSSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLE 513
T DV++R E G +G CV Q NL +KLYY+++E
Sbjct: 395 PTQDVVKRLETFGETFSQRFGQAVGPHCVALGRQRFNL------------GVKLYYKIME 442
Query: 514 AMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------------- 557
AM +E + L +N + LL + FH +LAC+ E+V+AT+ +
Sbjct: 443 AMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGESSFKTGGYNQGGGDATER 502
Query: 558 -MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
M FP +L+ +TAFD KVIESFI+ + +L +++ +HL + E ++E + W GS ++
Sbjct: 503 NMCFPWILDVVELTAFDFYKVIESFIKADPTLSKDIVKHLETCENLIMERIAWRTGSPLF 562
Query: 617 NSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDI 676
+ L +AE + T NFS P+ H H +
Sbjct: 563 DLLRQEHEGETAE---------------QVETTANFS----QPLQ--HNHTAA------- 594
Query: 677 RSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPP-LQSAFASPTRPNPGGGG 735
+ + SPV+ GL L + P Q++ PT+P
Sbjct: 595 -----------------DLYLSPVRP---GLRVLPPETAASPNTQASSQPPTQPV-SQPA 633
Query: 736 ETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRH 794
+++F+ K+ +LA R+ + L S ++ ++ LFQ L L +RH
Sbjct: 634 RPLKSNSLSLFYKKLYRLAYTRLKMLCSYLLSSHPELEPIIWTLFQHTLQHEHELMRDRH 693
Query: 795 IDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDH 854
+DQ+++C Y + K+ ++L F+ I+ Y+ P F+ V ++ ++
Sbjct: 694 LDQLMMCAMYAICKVKTVDLRFKTIVTAYKNMPNTSQDTFKHVLT----------TDGNY 743
Query: 855 VDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSV-FPALPD 913
II FYN +F+ +K +++ A T T P P P+ FP
Sbjct: 744 DSIIVFYNLVFMQKLKTNILQY--ASTRPPTL----------SPIPQIPRSPYKFPN--- 788
Query: 914 MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
SP +V + NVY+SP+++ +M + +GE
Sbjct: 789 -SPLRVPVSSNVYISPMKSPRMSPGMMTPRSRMLVSIGE 826
>gi|159477060|ref|XP_001696629.1| retinoblastoma protein [Chlamydomonas reinhardtii]
gi|158282854|gb|EDP08606.1| retinoblastoma protein [Chlamydomonas reinhardtii]
Length = 1209
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 272/590 (46%), Gaps = 82/590 (13%)
Query: 78 AFVLYLVRRLS-----EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
A +L++ R LS EK+G Q ++ ++ I+ V +N++DFF+E+ + +
Sbjct: 67 ASLLFVARVLSAAQKKEKDGSETQ--PSNLGLSISRIVAVAGINLLDFFREVHVVVSELS 124
Query: 133 PILSNIYGADWENRLEA--KELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAST 190
+ + + +A KE V + +L+K YK + F D
Sbjct: 125 AYFESRGSSSKQFSQQALLKENSETVVVMGLLAKKYKDNFNTFLHQLDF----------- 173
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
Y R GW FL LR+ S F D+V+C L I AIL H P + D
Sbjct: 174 --YKQVVLRLGWSAFLVLRVKLLSAFPDVVSCVELLPCIFAILASHAP------RLPDCL 225
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKI---MEKTNTLIADILKKKPCE----ASECK 303
+ + N+G L+ S+ DT + D ++ M L+ + E +E K
Sbjct: 226 THITRENRGKFLLKSMA---DTCKADYGRVQARMPSVEALLTQVFTSAVPEWRTAVAEAK 282
Query: 304 SENLEN---------IDTDGLIYFENLMDDSS-LSSSLNILEKDYD-NATRNKGELDERV 352
++ L + +D E L+ D+ ++ + LE++Y+ + +R ELDER
Sbjct: 283 AKALSDASGPAAVGGVDLVASPVLEGLVTDTDRMNRVVAALEREYEQHYSRGATELDERE 342
Query: 353 FINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP--HRSSASHPNG---- 406
F++ D + S S G ++ T AK + S+ P+++ PL P H ++ +HP
Sbjct: 343 FLSTDFTKFASPRFSPGHMHSTMAKLRSGSM--PLRS-GGPLGPGLHTATPAHPGPQQLH 399
Query: 407 -IAGGATSKMVV-----------TPVSTAMTTAKWLRTVICPLPSKPSAELERFLK---- 450
+ G S + + TP+S AM + WLR V + ++PS L+RFL
Sbjct: 400 LVPLGLHSPLPMMHLNAGPGVPGTPISEAMGASAWLRGVTSNMVAEPSPTLQRFLAALPI 459
Query: 451 ---SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKL 507
S +M+R ++ ++ P + L L++ +RR+EA KL
Sbjct: 460 NSNSSGPTPVQQLMKRVRDLVASVIP-----DEAAPSLLGPFPLLNTSLGAERRIEATKL 514
Query: 508 YYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERT 567
Y L+ + E + +LL + +F R ++AC E+V A ++ V+ FP VL+
Sbjct: 515 YCHSLDTILQNEQRTNGLPAALALLGSAKFQRGLIACCIEVVAACYRMVSCAFPNVLDAL 574
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
I AFD++ +I +F++ +LPREL+RHL +EE++LE + WE GSS+Y+
Sbjct: 575 RIKAFDMANIIGTFVKSIATLPRELKRHLFLIEEKILECLAWEPGSSLYH 624
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 746 FFCKINKLAAVRINAMVERLQLSQ----QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
F K+ KL + R+ + E S ++ VY + L ++T LF+NRHIDQI+L
Sbjct: 818 FLRKVLKLTSFRLALLCENFDFSPLEGPEVNSKVYEAIEHALYKQTHLFYNRHIDQIMLS 877
Query: 802 CFYGVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
YG K+ +L+ ++FREII YRKQPQ + +FRSV +D Q DII F
Sbjct: 878 TLYGYCKVHKLSQVSFREIIAQYRKQPQAQQSIFRSVVIDQVLPT---LQIQSRADIIGF 934
Query: 861 YNKIFVPAVKPLLVE 875
YN +FVPA++ L++
Sbjct: 935 YNAVFVPAMRNFLLK 949
>gi|45383327|ref|NP_989750.1| retinoblastoma-associated protein [Gallus gallus]
gi|82136242|sp|Q90600.1|RB_CHICK RecName: Full=Retinoblastoma-associated protein; AltName:
Full=p104; AltName: Full=pRb; Short=Rb
gi|459445|emb|CAA51019.1| p104 chicken Rb [Gallus gallus]
Length = 921
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/669 (24%), Positives = 295/669 (44%), Gaps = 143/669 (21%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + S+ +++L K YD
Sbjct: 259 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 314
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
++D R+F++ D++L ++ + T K D + V
Sbjct: 315 YLKNKDIDARLFLDHDETL-QPDVIACSQLERTPRKNNPDEEVNHV-------------- 359
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+ TPV AM T + L ++ KPS L + +C + ++
Sbjct: 360 -------------LPQTPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSIL 406
Query: 462 RR----AHIILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+R HI + + +G+ C GS QR ++LYYRV+E+M
Sbjct: 407 KRVESLGHIFKKKF--AEAVGQGCAEIGS-------------QRYQLGVRLYYRVMESML 451
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT-----------MLFPAVLE 565
+E + L N + LL + FH +LAC+ E+V+AT+ + FP +L
Sbjct: 452 KSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILN 511
Query: 566 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
+ AFD KVIESFI+ E SL R++ +HL E R++ES+ W+ S +++ + ++
Sbjct: 512 VFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-- 569
Query: 626 LSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTD 685
R G P P+ + +N P+ H H + +RSPK+ +
Sbjct: 570 -----EREGQTDQPEPT-----STLNL------PLQ--HNHTAADLYLSPVRSPKKKASG 611
Query: 686 YRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINI 745
+ G +N ++P SA + +P T +++
Sbjct: 612 HPQS----------------GTSNPDAQP------SATSQTQKPQ--------KSTSLSL 641
Query: 746 FFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI++C
Sbjct: 642 FYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSM 700
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
YG+ K+ ++L F+ I+ Y++ P + F+ V + E+ + II FYN
Sbjct: 701 YGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI----------REEQYDSIIVFYNL 750
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH 923
+F+ +K +++ +NR ++ P P P+ P SP++V A +
Sbjct: 751 VFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PYQFSNSPRRVPAGN 795
Query: 924 NVYVSPLRT 932
N+Y+SPL++
Sbjct: 796 NIYISPLKS 804
>gi|47211930|emb|CAF96000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1311
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 241/985 (24%), Positives = 404/985 (41%), Gaps = 242/985 (24%)
Query: 76 WFAFVLYLVRRLSEKN--GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY R G+ L +G N +L ILR +L+++ FF ++ ++
Sbjct: 419 WLACSLYAACRKGSTPTVGKGLMEG---NCVSLTRILRSSRLSLIQFFSKMRKW------ 469
Query: 134 ILSNIYGADWENRLEAKELQANF-VHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSG 192
+++ + RL K+L+ NF V + I K LP
Sbjct: 470 --ADMSNLSQDFRLRLKQLERNFEVSMVIFRKR---------LPC--------------- 503
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNG--LVSILAILIIHVPVRFRN-FNIHDS 249
+ SD RF W LF ++A F C G LV+ +L+ + + F N +
Sbjct: 504 HTSDVFRFCWTLF----VYAKGNF-----CMIGDDLVNSYHLLLCCLDLVFGNALLCSNR 554
Query: 250 SRFVKKSNKGVD----------------LIASLCSIYDTSEDDLRKIMEKT-NTLIADIL 292
V S KG ++ LC ++D + + I + I +
Sbjct: 555 KELVNPSFKGGSFGYPADGHAALDQPPCVLERLCELHDGLVVEAKGIKQHYFRPYIQKLF 614
Query: 293 KKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERV 352
+KK + E + L+D + + L K+Y+ G+ DERV
Sbjct: 615 EKKILKGKE--------------EHLTQLLDPQNFLENNKALNKEYEEYVLTVGDFDERV 660
Query: 353 FINED-DSLLGS-----GSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNG 406
F+ D D +G+ G S N A++ + AS V + +PL+ H + N
Sbjct: 661 FLGADADEEIGTPRKLVGDSSACQKN---AQQHLEKSASLVPS--TPLTGH--AYLKENN 713
Query: 407 IAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHI 466
G TP+S+A + L++++ L + PS L + +SC ++ + + R
Sbjct: 714 TLG--------TPISSATQSVSRLQSMVAGLRTAPSENLMQIFRSCSRNPSEAITARVRR 765
Query: 467 ILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAK 526
+ + L A+ +D +AE+R A LYY+VLE + E + LH K
Sbjct: 766 LGQTFKEHYSLDSEDTP-----ASHID--FAEKRLKLAEILYYKVLENVMVQETKRLHGK 818
Query: 527 NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEE 586
+++ LL + FH ++AC E+VL ++ + FP ++ + +F KVIE FIR EE
Sbjct: 819 DMSILLEQDIFHCSLMACCLEVVLFSYSS-QRTFPWIINVFKLASFYFFKVIEVFIRSEE 877
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAI 646
L R++ +HLN +EE++LES W + S+++ +L A +PS++ +
Sbjct: 878 GLSRDMVKHLNQIEEQVLESQAWSRDSALWGALQAA--------------GSKVPSVEEM 923
Query: 647 ATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSV---LVERNNFTSPVKDR 703
+ S+H+ +SP S KRP L SP K
Sbjct: 924 CLLLRL---------SVHERYSSPAAG----SAKRPLFGEEHPPPGLAHGLALISPAKRL 970
Query: 704 LLGLNN-LK-SKPLPPPLQSAFASPTRPNPGG-----GGETCAETGINIFFCKINKLAAV 756
++G ++ LK S P P A A P + +P G C + + LA+V
Sbjct: 971 MIGPSSTLKISAPGSAP---ALAVPLQEDPVQLTGLWAGPACLQ---------VYHLASV 1018
Query: 757 RINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAK-------- 808
R+ + +L +S ++R ++ + L T L RH+DQ++LC Y ++K
Sbjct: 1019 RLRDLCWKLDISAELRARIWTCLEHTLIHCTELMRGRHLDQLLLCSVYIMSKARRPTPKP 1078
Query: 809 ---------------------ISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA----- 842
+++ F +I+ YR QPQ V+R+V + +
Sbjct: 1079 EPQRAGRQQQRVTDRFPCVQQVTKETHFFHDIMKCYRSQPQASSHVYRNVLLRHSPGECV 1138
Query: 843 ----------------SARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTN 886
+ QSG E+ D+I FYN +FV VK V +
Sbjct: 1139 SEEKMEVDAAPAADGAGSSQSG--EEQRGDLIQFYNTVFVLKVKNFAVRYAVS------- 1189
Query: 887 RVSEVNHNNDGPCPGSPKVSVFPAL--PDMSPKKVSATHNVYVSPLRTSKMD-ALISHSS 943
+++G G+P +S FP+L +SP++VS H++YVSP ++S AL S+S
Sbjct: 1190 -------DSEG---GAPPLSPFPSLRAQPLSPRRVSQRHSLYVSPHKSSSGGPALNSYSY 1239
Query: 944 KSYYACVGESTHAYQSPSKDLTDIN 968
+ SPS +LT IN
Sbjct: 1240 R-----------INSSPSDELTAIN 1253
>gi|390351820|ref|XP_790323.3| PREDICTED: retinoblastoma-associated protein-like
[Strongylocentrotus purpuratus]
Length = 797
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 188/781 (24%), Positives = 333/781 (42%), Gaps = 126/781 (16%)
Query: 108 HILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYK 167
H+LR +NI FF+ + K I S + ++ L A + Q + +I K ++
Sbjct: 83 HLLRASNINIKTFFEHMG----KVEEIFS--FSDTVKSSLMALK-QKYLITYAIFCK-FE 134
Query: 168 RIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLV 227
+++ + F D + S D + WLLFL + S +LV
Sbjct: 135 KLFSKLFKSPDEIPCSTDGSCDVS---CDKRKVCWLLFLIAKGSMLSECSELV------- 184
Query: 228 SILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTL 287
L +H+ + ++ + + F + + ++S YD+ +D KTN
Sbjct: 185 -----LPLHLMLSCVDYTLRRALPFTVR-----ETVSS--PRYDSGSED------KTNER 226
Query: 288 IADILKKKPCEASECKSENLENIDTDGLIYF------ENLMDDSSLSSSLNILEKDYDNA 341
+ ++ ++ + + + L+ F EN D + LE Y
Sbjct: 227 VLRVVCEEGGVGGADAEDEVTMVKRSILLPFINSISSENTNQDVEGFPKMEHLESSYHQM 286
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+ G+++E F+ D +L ++ G SP T+ SP+
Sbjct: 287 YQAAGDINEVSFLTLDPTLTQPEAVKPGVP------------PSPDSTVKSPV------- 327
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+TPV A+TT + L++++ PS L + + C + + V
Sbjct: 328 --------------FLTPVRRAVTTVQALKSLLTGARDTPSNVLCSYFEGCSINPQSAVE 373
Query: 462 RRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ 521
+R + E +F +GE V Q + L A R L+ YYR++E+M E +
Sbjct: 374 QRVEKLKE-LFVGHYVGEVGV----QASEL-----ACTRFKLGLRFYYRIMESMLIKEEK 423
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT-------------MLFPAVLERTG 568
L + ++LL N+ FHR +LAC+ E+V+ T +LFP +L+
Sbjct: 424 RLSTSDFSTLLNNDAFHRSLLACALEVVMVTFGYTASPINSGMSALSSKLLFPWILDVFD 483
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ +F+ KVIESF+++E L E R+HL +E +++E + W S ++++L R +
Sbjct: 484 LHSFNFIKVIESFVKNEPRLTEEARKHLQGIETQIVECLAWSVNSPLFDALKRVRGI--- 540
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
E+N + PS + +H + + LSPV H +S + + P+R +
Sbjct: 541 EVNGSHTQS---PSSHGV-SHASAADMFLSPVRP--GHYSSTHRPNEATPPRR---THAP 591
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPN---PGGGGETCAETGINI 745
R + SP RL G+ S + LQ SP RP+ GGG E +N+
Sbjct: 592 TCASRLEYPSPKSSRL-GIQQCPSPRVG--LQQTCPSP-RPSYGGVGGGQEKLGSVTLNM 647
Query: 746 FFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYG 805
FF K +LA R++ M L LS+ + ++ + + + L RH+DQ+I+CC YG
Sbjct: 648 FFNKALQLAYHRLHTMCNLLDLSKDLNRLMWTCVEHCITNKPWLLQGRHLDQVIMCCMYG 707
Query: 806 VAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIF 865
+ K+ F+EI+ YR P Q +++V++ ++ II FYN+IF
Sbjct: 708 ICKVRDCERKFKEIVNMYRGLPHALSQTYKNVYMGEG---------KESASIIVFYNQIF 758
Query: 866 V 866
+
Sbjct: 759 I 759
>gi|14573437|gb|AAK68064.1|AF375824_1 mating type protein Mat3p [Chlamydomonas reinhardtii]
Length = 1209
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 272/590 (46%), Gaps = 82/590 (13%)
Query: 78 AFVLYLVRRLS-----EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
A +L++ R LS EK+G Q ++ ++ I+ V +N++DFF+E+ + +
Sbjct: 67 ASLLFVARVLSAAQKKEKDGSETQ--PSNLGLSISRIVAVAGINLLDFFREVHVVVSELS 124
Query: 133 PILSNIYGADWENRLEA--KELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAST 190
+ + + +A KE V + +L+K YK + F D
Sbjct: 125 AYFESRGSSSKQFSQQALLKENSETVVVMGLLAKKYKDNFNTFLHQLDF----------- 173
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
Y R GW FL LR+ S F D+V+C L I AIL H P + D
Sbjct: 174 --YKQVVLRLGWSAFLVLRVKLLSAFPDVVSCVELLPCIFAILASHAP------RLPDCL 225
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKI---MEKTNTLIADILKKKPCE----ASECK 303
+ + ++G L+ S+ DT + D ++ M L+ + E +E K
Sbjct: 226 THITREDRGKFLLKSMA---DTCKADYGRVQARMPSVEALLTQVFTSAVPEWRTAVAEAK 282
Query: 304 SENLEN---------IDTDGLIYFENLMDDSS-LSSSLNILEKDYD-NATRNKGELDERV 352
++ L + +D E L+ D+ ++ + LE++Y+ + +R ELDER
Sbjct: 283 AKALSDASGPAAVGGVDLVASPVLEGLVTDTDRMNRVVAALEREYEQHYSRGATELDERE 342
Query: 353 FINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP--HRSSASHPNG---- 406
F++ D + S S G ++ T AK + S+ P+++ PL P H ++ +HP
Sbjct: 343 FLSTDFTKFASPRFSPGHMHSTMAKLRSGSM--PLRS-GGPLGPGLHTATPAHPGPQQLH 399
Query: 407 -IAGGATSKMVV-----------TPVSTAMTTAKWLRTVICPLPSKPSAELERFLK---- 450
+ G S + + TP+S AM + WLR V + ++PS L+RFL
Sbjct: 400 LVPLGLHSPLPMMHLNAGPGVPGTPISEAMGASAWLRGVTSNMVAEPSPTLQRFLAALPI 459
Query: 451 ---SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKL 507
S +M+R ++ ++ P + L L++ +RR+EA KL
Sbjct: 460 NSNSSGPTPVQQLMKRVRDLVASVIP-----DEAAPSLLGPFPLLNTSLGVERRIEATKL 514
Query: 508 YYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERT 567
Y L+ + E + +LL + +F R ++AC E+V A ++ V+ FP VL+
Sbjct: 515 YCHSLDTILQNEQRTNGLPAALALLGSAKFQRGLIACCIEVVAACYRMVSCAFPNVLDAL 574
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
I AFD++ +I +F++ +LPREL+RHL +EE++LE + WE GSS+Y+
Sbjct: 575 RIKAFDMANIIGTFVKSIATLPRELKRHLFLIEEKILECLAWEPGSSLYH 624
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 746 FFCKINKLAAVRINAMVERLQLSQ----QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
F K+ KL + R+ + E S ++ VY + L ++T LF+NRHIDQI+L
Sbjct: 818 FLRKVLKLTSFRLALLCENFDFSPLEGPEVNSKVYEAIEHALYKQTHLFYNRHIDQIMLS 877
Query: 802 CFYGVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
YG K+ +L+ ++FREII YRKQPQ + +FRSV +D Q DII F
Sbjct: 878 TLYGYCKVHKLSQVSFREIIAQYRKQPQAQQSIFRSVVIDQVLPT---LQIQSRADIIGF 934
Query: 861 YNKIFVPAVKPLLVE 875
YN +FVPA++ L++
Sbjct: 935 YNAVFVPAMRNFLLK 949
>gi|426391643|ref|XP_004062178.1| PREDICTED: retinoblastoma-like protein 1 [Gorilla gorilla gorilla]
Length = 962
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 256/1049 (24%), Positives = 423/1049 (40%), Gaps = 249/1049 (23%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAK 428
A G RKF T +PL + A+ + K P ST +T +
Sbjct: 326 -AEEEIGTPRKF--------TRDTPLGKLTAQANVEYNLQQHFEKKRSFAP-STPLTGRR 375
Query: 429 WLR---TVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGS 485
+LR VI P+ S T V R I+ +GL S
Sbjct: 376 YLREKEAVITPVAS----------------ATQSVSRLQSIV-------AGLKN---APS 409
Query: 486 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 545
Q N+ + ++ + E + Y V+ QVL L + FHR ++AC
Sbjct: 410 DQLINIFEFLY-RMAKTEIAEKYLTVVFLF----PQVL--------LEQDIFHRSLMACC 456
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
E+VL + + FP ++E + F KVIE IR EE L R++ +HLNS+EE++LE
Sbjct: 457 LEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILE 515
Query: 606 SMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGG--------- 656
S+ W S+++ +L V+ A+ +P+ + + NF +G
Sbjct: 516 SLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFETGNGGNVQGHLP 561
Query: 657 ---LSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPV----KDRLLGLN- 708
+SP+ E +G +R +P S + ++SP K RL G +
Sbjct: 562 LMPMSPLMHPRVKEVR-TDSGSLRRDMQPL----SPISVHERYSSPTAGSAKRRLFGEDP 616
Query: 709 --------------NLKSKPLPP---------PLQSAFASPTRPNPGGGG--------ET 737
LK P P Q+ T P G G E
Sbjct: 617 PKEMLMDKIITEGTKLKIAPSSSITAENISILPGQTLLTMATAPVTGTTGHKVTIPLHEN 676
Query: 738 CAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQ 797
G +++ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ
Sbjct: 677 KDLCGACLYYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQ 736
Query: 798 IILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV------------------ 839
++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 737 LLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNKNINDDF 796
Query: 840 -----DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVS 889
D A + SG +++ D+I FYN I+V VK A+K + +S
Sbjct: 797 EMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LS 846
Query: 890 EVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYY 947
+H D P P SP FP + SP+++S H++Y+SP K + ++ S Y
Sbjct: 847 NQDHMMDAP-PLSP----FPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSALLY 898
Query: 948 ACVGESTHAYQSPSKDLTDINHRLNSNRR 976
G SPSK L DIN+ + +
Sbjct: 899 KFNG-------SPSKSLKDINNMIRQGEQ 920
>gi|432898486|ref|XP_004076525.1| PREDICTED: retinoblastoma-associated protein isoform 1 [Oryzias
latipes]
Length = 916
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 168/707 (23%), Positives = 302/707 (42%), Gaps = 149/707 (21%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSS--LNILEKDYDNATRNKGELDERVFI 354
C+ +EC +E ++N+ F +LMD S + + + Y G++D R+F
Sbjct: 263 CKDNECNAEEVKNVYQTSFSAFLDLMDLSRFPDFPLVTDVSEQYQEHYLKSGDIDGRLFF 322
Query: 355 NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTIT---SPLSPHRSSASHPNGIAGGA 411
+ D+++L V+I+ +R +P KT PL P +
Sbjct: 323 DGDETVLAP------KVDISQVER------TPKKTSPDDDGPLIPPQ------------- 357
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
TP+ AM + K LR + +PS+ L + K+C D T + +R ++ +
Sbjct: 358 ------TPIRAAMNSIKMLRGDLPSSGDQPSSNLAIYFKNCTVDPTQGIQKRLEMLGQVF 411
Query: 472 FPSSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
G +G C+ ++ +R ++LYY+V+EAM +E + L +N +
Sbjct: 412 SQKFGEAVGPHCI------------VYGRERFTLGVRLYYKVMEAMLESEEKRLSVQNFS 459
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVT-----------------MLFPAVLERTGITAF 572
LL + FH +LAC+ E+V+AT++ + + FP +L+ ++AF
Sbjct: 460 KLLNDSTFHMSLLACALEVVMATYEESSFKNRGCSHGEGDQAVRDLCFPWILDVFDLSAF 519
Query: 573 DLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINR 632
D KVIESFI+ E +L +++ +HL + E ++E + W GS ++ L + E
Sbjct: 520 DFYKVIESFIKAEPTLSKDIIKHLETCENLIMEKIAWRTGSPLFELLKRENEAGATE--- 576
Query: 633 LGLLADPMPSLDAIATHINFSSG-GLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLV 691
A+P S H + ++ LSP+ PG + P+ P T
Sbjct: 577 ---QAEPPASFSLPLQHNHTAADLYLSPIR--------PGLR--VLPPESPATPS----- 618
Query: 692 ERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKIN 751
+ S+P P Q+A +P +P +++F+ K+
Sbjct: 619 ----------------SQASSQPTP---QAAGQAPRQPK---------SNSLSLFYKKLY 650
Query: 752 KLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKI 809
+LA R+ + L LS + ++ LFQ L L +RH+DQ+++ Y + K+
Sbjct: 651 RLAYTRLKTLCSCL-LSNHPDLEHVIWTLFQHTLQYEYDLMRDRHLDQLMMSAMYAICKV 709
Query: 810 SQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAV 869
++L F+ I+ Y+ P + F+ V + +E + II FYN++F+ +
Sbjct: 710 KSVDLRFKLIVSAYKNMPNTSQETFKHVLI----------TEGQYDSIIVFYNQVFMQKL 759
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSP 929
K +++ + R ++ PC SP FP SP +V ++NVY+SP
Sbjct: 760 KTNILQYA-------STRPPTLSPIPQIPC--SP--YKFPN----SPLRVPGSNNVYISP 804
Query: 930 LRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
L+ S++ + +GES + IN +NS R
Sbjct: 805 LKNSRLSPGMMTPRSRMLVSIGESFGF----ANRFQKINQMVNSGDR 847
>gi|350589853|ref|XP_001926888.4| PREDICTED: retinoblastoma-associated protein [Sus scrofa]
Length = 938
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 168/676 (24%), Positives = 290/676 (42%), Gaps = 163/676 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ + +S + L K
Sbjct: 279 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSK 328
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F+N D +L A P ++ +P
Sbjct: 329 QYEEIYLKNKDLDARLFLNHDKTLQ----------------------ADPTDSLEMQRTP 366
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
+S+ + + TPV T M T + L ++ +PS L + +C +
Sbjct: 367 RKSNPDEEVNVI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 420
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ C+ GS QR ++LYYRV+
Sbjct: 421 KESILKRVKDIGYIFKEQF-AKAVGQGCMEIGS-------------QRYKLGVRLYYRVM 466
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 467 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWI 526
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 527 LNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLFDLIKQAK 586
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P L++ T IN P+ S H + +RSPK+
Sbjct: 587 -------DREG----PADHLESACTLINL------PLQS--NHTAADMYLSPLRSPKKKG 627
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R S + +++ PL+S T +
Sbjct: 628 STTR--------VNSTANSEAQATSTFQTQ---KPLKS-------------------TSL 657
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C
Sbjct: 658 SLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 716
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 717 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFY 766
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ P +S P +P SP K S+
Sbjct: 767 NSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSS 804
Query: 922 T------HNVYVSPLR 931
+ N+Y+SPL+
Sbjct: 805 SPLRIPGGNIYISPLK 820
>gi|403303288|ref|XP_003942268.1| PREDICTED: retinoblastoma-associated protein [Saimiri boliviensis
boliviensis]
Length = 926
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 173/677 (25%), Positives = 290/677 (42%), Gaps = 164/677 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I +IL C+ EC + ++N+ I F N L+ + L + L K Y+
Sbjct: 268 DTRIIEIL----CKEHECNIDEVKNVYLKNFIPFMNSLGLVTSNGLPE-VESLSKRYEEI 322
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + SPH
Sbjct: 323 YLKNKDLDARLFLDHDKTL-QTDSIDSFEAQRTPRKSNLDEEVNVI-------SPH---- 370
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 371 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 414
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 415 KRVKDIGYIFKEKF-AEAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 460
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 461 SEEERLSIQNFSKLLNDSIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 520
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 521 LKAFDFYKVIESFIKAEGTLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 575
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+
Sbjct: 576 --DREG----PTDHLES-ACPLNV---ALQNNHTAADMYLSP-----VRSPKKK------ 614
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA--------- 739
S TR N ET A
Sbjct: 615 -----------------------------------GSATRVNSTANAETQATSAFQTQKP 639
Query: 740 --ETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHI 795
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+
Sbjct: 640 LKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHL 698
Query: 796 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
DQI++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++
Sbjct: 699 DQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYD 748
Query: 856 DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMS 915
II FYN +F+ +K +++ + + +S + H P SP FP+ P
Sbjct: 749 SIIVFYNSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRI 797
Query: 916 PKKVSATHNVYVSPLRT 932
P N+Y+SPL++
Sbjct: 798 P-----GGNIYISPLKS 809
>gi|350424140|ref|XP_003493700.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Bombus
impatiens]
Length = 1007
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 260/1073 (24%), Positives = 448/1073 (41%), Gaps = 209/1073 (19%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
D+T +R DLC+ L++D E K + + N E + W L
Sbjct: 9 DSTYSRHQDLCQK-LNMDATAASEAWKSYETIRQ----------NYTLEGDQLHWIGCAL 57
Query: 82 YLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
Y+ R S K G N++ N +L +L++ L ++ FF + KS ++
Sbjct: 58 YVACRKSSIPTVGKTGTNVE----GNCVSLTRLLQLCNLPLIQFFTK-----SKSWADMA 108
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSD-----ANGDKQSAAAST 190
N+ D+ +++E +L+ NF ++ K Y+ I+ + F P D + A T
Sbjct: 109 NM-SQDFRSKIE--KLEGNFAVSMVIFKKYQPIFTDIFKDPVDDISRPPRSRRHKAMPCT 165
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
+ F W LF+ ++ F D+ ++ LV+ +L++ + + N + +
Sbjct: 166 PARV---FEFCWTLFICIK----GAFPDI---SDDLVNSYHLLLVCCDLIYSNALLANRK 215
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK----PCEASECKSEN 306
+ + G+ ++ +D I +T I +L ++ EA K
Sbjct: 216 DLLNPNFPGLP----------SNFNDENYIPPQTANCIVSLLCERHEAIAVEAKVIKEYY 265
Query: 307 LENIDTDGLIYFENLM--DDSSLSSSLNILEKD---------YDNATRNKGELDERVFIN 355
L+N ++ E ++ D ++ S L L D Y+ + G+ DER+F+
Sbjct: 266 LKNHINK--LFNERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFLG 323
Query: 356 EDDSL-LGSGSLSGGAVNITGAKRKF----DSLASPVKTITSPLSPHRSSASHPNGIAGG 410
D S +GS + +N+ +F + + ++ + P S P I
Sbjct: 324 HDASNNIGSPT---QMMNVGDLHEQFQMKKEQYSGQIQHLAPPTPLTGRSYLRPKDITN- 379
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
VTPVSTA + L+ ++ S PS L + L SC +DV T V +
Sbjct: 380 ------VTPVSTATQSVIRLQAMLAGQTS-PSENLLQILNSCSQDVKTLVETKVK----- 427
Query: 471 IFPSSGLGERCVTGSLQGANLMDNI--WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNL 528
LGE + N D + + R L+YR+LE + E + ++
Sbjct: 428 -----ELGELFCANYNKSTNANDTTSDFGKMRLYLGQTLFYRLLEMILNDEKRKKPNYDV 482
Query: 529 TSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESL 588
T+LLT E F +C+ AC E+V+ ++K+ +FP +L + A+ KVIE +R E L
Sbjct: 483 TNLLTKEIFIQCLFACCLEIVIYSYKSNDKIFPWILNALSLDAYYFYKVIEIIVRAENQL 542
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLL--ADP----M 640
R++ +HLN +EE++LES+ W+ S +++++ + V S E++ G+L DP
Sbjct: 543 SRDVVKHLNQIEEKILESLAWQSDSPLWSAIQSTPEGVPSCEEVSLPGMLETVDPNIPGQ 602
Query: 641 PSLDAIA----THINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR----SVLVE 692
P L IA TH + SP+ S + SP + + KR D R SVL
Sbjct: 603 PVLRRIALDRGTHHDVQQ---SPISSASERFQSPVAASGV-AKKRLFPDTRIGGQSVLRV 658
Query: 693 RNNFTSPVK-------DRLLGLNNLKSKPLPPPLQSAFA---------SPTRPNPGGGGE 736
P K R+L L + P +QS P +P G
Sbjct: 659 TGQSVLPSKVLTIDGNSRILLLPEQITVPRSSSVQSTGTPMQTVAVNREPAKPKRTG--- 715
Query: 737 TCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHI 795
+ +FF K LA+VR+ + L++ +++ ++ +F+ + +RT L +RH+
Sbjct: 716 -----SVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIFEYSIKERTELMKDRHL 770
Query: 796 DQIILCCFYGVAKISQLNL-TFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-------- 846
DQI++C Y + K++++ +F EI+ YR QPQ + ++RSV + + +
Sbjct: 771 DQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGELQKNNEEI 830
Query: 847 --------------------SGRS----EQDHVDIITFYNKIFVPAVKPLLVELGPA-GT 881
+G S E+ D+I FYN ++VP VK + +LG A G+
Sbjct: 831 GQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLARGS 890
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL-RTSKMDALIS 940
M +S+ P LP P S V S + RT A+ +
Sbjct: 891 VM--------------------NLSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISA 929
Query: 941 HSSKSYYACVGESTHAYQSPSKDLTDINHRLNS---NRRVRGTLNFDDVDVDV 990
+ C +SP+KDL IN + S R V L D+ DV++
Sbjct: 930 SPAPQLSYCFS------RSPAKDLEAINKMMISVDPKRSVGKRLLTDETDVEM 976
>gi|441613864|ref|XP_003270122.2| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-associated protein
isoform 1 [Nomascus leucogenys]
Length = 928
Score = 183 bits (464), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 173/671 (25%), Positives = 295/671 (43%), Gaps = 152/671 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ L +S + L K
Sbjct: 270 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVESLSK 319
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L + S+ T K D + + P
Sbjct: 320 RYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PP 371
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
H TPV T MTT + L ++ +PS L + +C +
Sbjct: 372 H--------------------TPVRTVMTTIQQLMMILNSASDQPSENLISYFNNCTVNP 411
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ CV GS QR ++LYYRV+
Sbjct: 412 KESILKRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVM 457
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 458 ESMLKSEEERLSIQNFSKLLNDNVFHMSLLACALEIVMATYSRSTSQNLDSGTDLSFPWI 517
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 518 LNVLNLKAFDFYKVIESFIKAEGTLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK 577
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P ++ A +N L H+ SP +RSPK+
Sbjct: 578 -------DREG----PTDHFES-ACPVNLP---LQNNHTAADMYLSP-----VRSPKKKG 617
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R N T+ + + SAF + + T +
Sbjct: 618 S------TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSL 647
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C
Sbjct: 648 SLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 706
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 707 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFY 756
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ + + +S + H P SP FP+ P P
Sbjct: 757 NSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP----- 800
Query: 922 THNVYVSPLRT 932
N+Y+SPL++
Sbjct: 801 GGNIYISPLKS 811
>gi|432898488|ref|XP_004076526.1| PREDICTED: retinoblastoma-associated protein isoform 2 [Oryzias
latipes]
Length = 921
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 168/712 (23%), Positives = 302/712 (42%), Gaps = 154/712 (21%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSS-------SLNILEKDYDNATRNKGELD 349
C+ +EC +E ++N+ F +LMD S + + + Y G++D
Sbjct: 263 CKDNECNAEEVKNVYQTSFSAFLDLMDLSRFPDFPLQGIPPVTDVSEQYQEHYLKSGDID 322
Query: 350 ERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTIT---SPLSPHRSSASHPNG 406
R+F + D+++L V+I+ +R +P KT PL P +
Sbjct: 323 GRLFFDGDETVLAP------KVDISQVER------TPKKTSPDDDGPLIPPQ-------- 362
Query: 407 IAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHI 466
TP+ AM + K LR + +PS+ L + K+C D T + +R +
Sbjct: 363 -----------TPIRAAMNSIKMLRGDLPSSGDQPSSNLAIYFKNCTVDPTQGIQKRLEM 411
Query: 467 ILEAIFPSSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLH 524
+ + G +G C+ ++ +R ++LYY+V+EAM +E + L
Sbjct: 412 LGQVFSQKFGEAVGPHCI------------VYGRERFTLGVRLYYKVMEAMLESEEKRLS 459
Query: 525 AKNLTSLLTNERFHRCMLACSAELVLATHKTVT-----------------MLFPAVLERT 567
+N + LL + FH +LAC+ E+V+AT++ + + FP +L+
Sbjct: 460 VQNFSKLLNDSTFHMSLLACALEVVMATYEESSFKNRGCSHGEGDQAVRDLCFPWILDVF 519
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
++AFD KVIESFI+ E +L +++ +HL + E ++E + W GS ++ L +
Sbjct: 520 DLSAFDFYKVIESFIKAEPTLSKDIIKHLETCENLIMEKIAWRTGSPLFELLKRENEAGA 579
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSG-GLSPVHSLHKHETSPGQNGDIRSPKRPCTDY 686
E A+P S H + ++ LSP+ PG + P+ P T
Sbjct: 580 TE------QAEPPASFSLPLQHNHTAADLYLSPIR--------PGLR--VLPPESPATPS 623
Query: 687 RSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIF 746
+ S+P P Q+A +P +P +++F
Sbjct: 624 ---------------------SQASSQPTP---QAAGQAPRQPK---------SNSLSLF 650
Query: 747 FCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFY 804
+ K+ +LA R+ + L LS + ++ LFQ L L +RH+DQ+++ Y
Sbjct: 651 YKKLYRLAYTRLKTLCSCL-LSNHPDLEHVIWTLFQHTLQYEYDLMRDRHLDQLMMSAMY 709
Query: 805 GVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKI 864
+ K+ ++L F+ I+ Y+ P + F+ V + +E + II FYN++
Sbjct: 710 AICKVKSVDLRFKLIVSAYKNMPNTSQETFKHVLI----------TEGQYDSIIVFYNQV 759
Query: 865 FVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHN 924
F+ +K +++ + R ++ PC SP FP SP +V ++N
Sbjct: 760 FMQKLKTNILQYA-------STRPPTLSPIPQIPC--SP--YKFPN----SPLRVPGSNN 804
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
VY+SPL+ S++ + +GES + IN +NS R
Sbjct: 805 VYISPLKNSRLSPGMMTPRSRMLVSIGESFGF----ANRFQKINQMVNSGDR 852
>gi|344281690|ref|XP_003412611.1| PREDICTED: retinoblastoma-associated protein-like [Loxodonta
africana]
Length = 1003
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 182/765 (23%), Positives = 312/765 (40%), Gaps = 176/765 (23%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI-------IHVPVRFRNFNIHDSSR 251
+ W+ FL + DLV ++ +L I + P + I+ S R
Sbjct: 267 KLSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAVIPINGSPR 326
Query: 252 FVKK-SNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENI 310
++ N+ + L E+D R I ++L C EC + ++N+
Sbjct: 327 TPRRGQNRSARIAKQL-------ENDTR---------IIEVL----CTEHECNIDEVKNV 366
Query: 311 DTDGLIYFENLMD--DSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
I F N + S+ + L K Y+ R +LD R+F++ D +L
Sbjct: 367 YFKNFIPFMNSLGIVASNGLPEVESLSKQYEEIYRKNKDLDARLFLDHDKTLQ------- 419
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAK 428
A P+ + + +P +S+ + T PV M T +
Sbjct: 420 ---------------ADPIDSFETQRTPRKSNPDEEVNMIPPQT------PVRAVMNTIQ 458
Query: 429 WLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG 488
L T++ +PS L + +C + +++R I IF E+ QG
Sbjct: 459 QLMTILNSASDQPSENLISYFNNCTVNPKESILKRVRDI-GCIF-----KEKFARAVGQG 512
Query: 489 ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAEL 548
+ QR ++LYYRV+E+M +E + L +N + LL + FH+ +LAC+ E+
Sbjct: 513 CAEI----GSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHKSLLACALEV 568
Query: 549 VLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
V+AT+ T + FP +L + AFD KVIESFI+ E +L RE+ +HL
Sbjct: 569 VMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERC 628
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
E R++ES+ W S +++ + +R +R G A H+ + P
Sbjct: 629 EHRIMESLAWLSDSPLFDLIKQSR-------DREG-----------PADHLEPACALNLP 670
Query: 660 VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLP--- 716
+ + H + +RSPK K P P
Sbjct: 671 LQ--NNHTAADMYLSPLRSPK------------------------------KKGPTPRVN 698
Query: 717 -PPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRE 773
PP A A+P + T +++F+ K+ +LA +R+N + RL LS ++
Sbjct: 699 SPPSAEAQAAPA----FQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEH 753
Query: 774 SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQV 833
++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P +
Sbjct: 754 IIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQET 813
Query: 834 FRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH 893
F+ V + E+++ II FYN +F+ +KTN + +
Sbjct: 814 FKRVLI----------REEEYDSIIVFYNSVFM--------------QKLKTNILQYAST 849
Query: 894 NNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLRT 932
P +S P +P SP K S++ N+Y+SPL++
Sbjct: 850 R-------PPTLSPIPHIP-RSPYKFSSSPLRIPGGNIYISPLKS 886
>gi|326914172|ref|XP_003203401.1| PREDICTED: retinoblastoma-associated protein-like [Meleagris
gallopavo]
Length = 950
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 163/669 (24%), Positives = 295/669 (44%), Gaps = 143/669 (21%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + S+ +++L K YD
Sbjct: 288 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 343
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
++D R+F++ D++L ++ + T K D + V
Sbjct: 344 YLKNKDIDARLFLDRDETL-QPDVIACSQLERTPGKNNPDEEVNHV-------------- 388
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+ TPV AM T + L ++ KPS L + +C + ++
Sbjct: 389 -------------LPQTPVRAAMNTIQQLMMILNSAIDKPSDTLIAYFNNCTVNPEDSIL 435
Query: 462 RR----AHIILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+R HI + + +G+ C GS QR ++LYYRV+E+M
Sbjct: 436 KRVESLGHIFKKKF--AEAVGQGCAEIGS-------------QRYQLGVRLYYRVMESML 480
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH-KTVTML----------FPAVLE 565
+E + L N + LL + FH +LAC+ E+V+AT+ +T + FP +L
Sbjct: 481 KSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQSDGTSAETDSSFPWILN 540
Query: 566 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
+ AFD KVIESFI+ E SL R++ +HL E R++ES+ W+ S +++ + ++
Sbjct: 541 VFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-- 598
Query: 626 LSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTD 685
R G P P+ + +N P+ H H + +RSPK+ +
Sbjct: 599 -----EREGQTDQPEPT-----STLNL------PLQ--HNHTAADLYLSPVRSPKKKASG 640
Query: 686 YRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINI 745
+ +N ++P SA + +P T +++
Sbjct: 641 HPQS----------------STSNPDAQP------SATSQTQKPQ--------KSTSLSL 670
Query: 746 FFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
F+ K+ +LA +R++ + RL LS+ + ++ LFQ L L +RH+DQI++C
Sbjct: 671 FYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNEYELMRDRHLDQIMMCSM 729
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
YG+ K+ ++L F+ I+ Y++ P + F+ V + E+ + II FYN
Sbjct: 730 YGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI----------REEQYDSIIVFYNL 779
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH 923
+F+ +K +++ +NR ++ P P P+ P SP++V A +
Sbjct: 780 VFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PYQFSNSPRRVPAGN 824
Query: 924 NVYVSPLRT 932
N+Y+SPL++
Sbjct: 825 NIYISPLKS 833
>gi|399571554|gb|AFP48333.1| retinoblastoma protein [Sus scrofa]
Length = 939
Score = 182 bits (463), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 164/670 (24%), Positives = 287/670 (42%), Gaps = 151/670 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDNAT 342
+T I ++L C+ EC + ++N+ I F N + S+ + L K Y+
Sbjct: 280 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSKQYEEIY 335
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
+LD R+F+N D +L A P ++ +P +S+
Sbjct: 336 LKNKDLDARLFLNHDKTLQ----------------------ADPTDSLEMQRTPRKSNPD 373
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+ + TPV T M T + L ++ +PS L + +C + +++
Sbjct: 374 EEVNVI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILK 427
Query: 463 RAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
R I + F + +G+ C+ GS QR ++LYYRV+E+M +
Sbjct: 428 RVKDIGYIFKEQF-AKAVGQGCMEIGS-------------QRYKLGVRLYYRVMESMLKS 473
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGI 569
E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L +
Sbjct: 474 EEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNL 533
Query: 570 TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + +
Sbjct: 534 KAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLFDLIKQTK------ 587
Query: 630 INRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSV 689
+R G P L++ T IN P+ S H + +RSPK+ + R
Sbjct: 588 -DREG----PADHLESACTLINL------PLQS--NHTAADMYLSPLRSPKKKGSTTR-- 632
Query: 690 LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCK 749
S + +++ PL+S T +++F+ K
Sbjct: 633 ------VNSTANSEAQATSTFQTQ---KPLKS-------------------TSLSLFYKK 664
Query: 750 INKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVA 807
+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 665 VYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGIC 723
Query: 808 KISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVP 867
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 724 KVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSVFMQ 773
Query: 868 AVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT----- 922
+K +++ P +S P +P SP K S++
Sbjct: 774 RLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPVRIP 811
Query: 923 -HNVYVSPLR 931
N+Y+SPL+
Sbjct: 812 GGNIYISPLK 821
>gi|340722761|ref|XP_003399770.1| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Bombus
terrestris]
Length = 1007
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 259/1073 (24%), Positives = 446/1073 (41%), Gaps = 209/1073 (19%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
D+T +R DLC+ L++D E K + + N E + W L
Sbjct: 9 DSTYSRHQDLCQK-LNMDATAASEAWKSYETIRQ----------NYTLEGDQLHWIGCAL 57
Query: 82 YLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
Y+ R S K G N++ N +L +L++ L ++ FF + KS ++
Sbjct: 58 YVACRKSSIPTVGKTGTNVE----GNCVSLTRLLQLCNLPLIQFFTK-----SKSWADMA 108
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSD-----ANGDKQSAAAST 190
N+ D+ +++E +L+ NF ++ K Y+ I+ + F P D + A T
Sbjct: 109 NM-SQDFRSKIE--KLEGNFAVSMVIFKKYQPIFTDIFKDPVDDISRPPRSRRHKAMPCT 165
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
+ F W LF+ ++ F D+ ++ LV+ +L++ + + N + +
Sbjct: 166 PARV---FEFCWTLFICIK----GAFPDI---SDDLVNSYHLLLVCCDLIYSNALLANRK 215
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK----PCEASECKSEN 306
+ + G+ ++ +D +T I +L ++ EA K
Sbjct: 216 DLLNPNFPGL----------PSNFNDENYTPPQTANCIVSLLCERHEAIAVEAKVIKEYY 265
Query: 307 LENIDTDGLIYFENLM--DDSSLSSSLNILEKD---------YDNATRNKGELDERVFIN 355
L+N ++ E ++ D ++ S L L D Y+ + G+ DER+F+
Sbjct: 266 LKNHINK--LFNERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFLG 323
Query: 356 EDDS-LLGSGSLSGGAVNITGAKRKF----DSLASPVKTITSPLSPHRSSASHPNGIAGG 410
D S +GS + +N+ +F + + ++ + P S P I
Sbjct: 324 HDASNNIGSPT---QMMNVGDLHEQFQMKKEQYSGQIQHLAPPTPLTGRSYLRPKDITN- 379
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
VTPVSTA + L+ ++ S PS L + L SC +DV T V +
Sbjct: 380 ------VTPVSTATQSVIRLQAMLAGQTS-PSENLLQILNSCSQDVKTLVETKVK----- 427
Query: 471 IFPSSGLGERCVTGSLQGANLMDNI--WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNL 528
LGE + N D + + R L+YR+LE + E + ++
Sbjct: 428 -----ELGELFCANYNKSTNANDTTSDFGKMRLYLGQTLFYRLLEMILNDEKRKKPNYDV 482
Query: 529 TSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESL 588
T+LLT E F +C+ AC E+V+ ++K+ +FP +L + A+ KVIE +R E L
Sbjct: 483 TNLLTKEIFIQCLFACCLEIVIYSYKSNDKIFPWILNALSLDAYYFYKVIEIIVRAENQL 542
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLL--ADP----M 640
R++ +HLN +EE++LES+ W+ S ++ ++ + V S E++ G+L DP
Sbjct: 543 SRDVVKHLNQIEEKILESLAWQSDSPLWGAIQSTPEGVPSCEEVSLPGMLETVDPNIPGQ 602
Query: 641 PSLDAIA----THINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR----SVLVE 692
P L IA TH + SP+ S + SP + + KR D R SVL
Sbjct: 603 PVLRRIALDRGTHHDVQQ---SPISSASERFQSPVAASGV-AKKRLFPDTRIGGQSVLRV 658
Query: 693 RNNFTSPVK-------DRLLGLNNLKSKPLPPPLQSAFA---------SPTRPNPGGGGE 736
P K R+L L + P +QS P +P G
Sbjct: 659 TGQSVLPSKVLTIDGNSRILLLPEQITVPRSSSVQSTGTPMQTVAVNREPAKPKRTG--- 715
Query: 737 TCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHI 795
+ +FF K LA+VR+ + L++ +++ ++ +F+ + +RT L +RH+
Sbjct: 716 -----SVALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIFEYSIKERTELMKDRHL 770
Query: 796 DQIILCCFYGVAKISQLNL-TFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-------- 846
DQI++C Y + K++++ +F EI+ YR QPQ + ++RSV + + +
Sbjct: 771 DQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGELQKNNEEI 830
Query: 847 --------------------SGRS----EQDHVDIITFYNKIFVPAVKPLLVELGPA-GT 881
+G S E+ D+I FYN ++VP VK + +LG A G+
Sbjct: 831 GQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLARGS 890
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL-RTSKMDALIS 940
M +S+ P LP P S V S + RT A+ +
Sbjct: 891 VM--------------------NLSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISA 929
Query: 941 HSSKSYYACVGESTHAYQSPSKDLTDINHRLNS---NRRVRGTLNFDDVDVDV 990
+ C +SP+KDL IN + S R V L D+ DV++
Sbjct: 930 SPAPQLSYCFS------RSPAKDLEAINKMMISVDPKRSVGKRLLTDETDVEM 976
>gi|13604258|gb|AAK32151.1| retinoblastoma protein 1 [Pan troglodytes]
Length = 882
Score = 182 bits (462), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 172/677 (25%), Positives = 289/677 (42%), Gaps = 164/677 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 224 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 278
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 279 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 326
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 327 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 370
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 371 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 416
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 417 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 476
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 477 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 531
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+
Sbjct: 532 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKK------ 570
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA--------- 739
S TR N ET A
Sbjct: 571 -----------------------------------GSTTRVNSTANAETQATSAFQTQKP 595
Query: 740 --ETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHI 795
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+
Sbjct: 596 LKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHL 654
Query: 796 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
DQI++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++
Sbjct: 655 DQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYD 704
Query: 856 DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMS 915
II FYN +F+ +K +++ + + +S + H P SP FP+ P
Sbjct: 705 SIIVFYNSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRI 753
Query: 916 PKKVSATHNVYVSPLRT 932
P N+Y+SPL++
Sbjct: 754 P-----GGNIYISPLKS 765
>gi|24754020|gb|AAN64133.1| retinoblastoma 1 (including osteosarcoma) [Homo sapiens]
Length = 928
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 295/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 270 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 324
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 325 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 372
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 373 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 416
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 417 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 462
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ + T + FP +L
Sbjct: 463 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSSNTSQNLDSGTDLSFPWILNVLN 522
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 523 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 577
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 578 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 618
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 619 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 652
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 653 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 711
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 712 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 761
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ P P N+Y
Sbjct: 762 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP-----GGNIY 805
Query: 927 VSPLRT 932
+SPL++
Sbjct: 806 ISPLKS 811
>gi|13346592|gb|AAG21826.1| retinoblastoma [Oryzias latipes]
Length = 910
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 204/903 (22%), Positives = 367/903 (40%), Gaps = 190/903 (21%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILS 163
F L +L+ + +N+ F + Q V I + + A R+E K + + L
Sbjct: 100 FTLTEVLKAVNINVKQFVDLVRQLDVNLDTISTKVNSALM--RVEKK-----YDVMLALY 152
Query: 164 KSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCT 223
+ +++ ++ F + DK+ A R W +FL + A DLV
Sbjct: 153 QRFEKTCKKIFA---STPDKKERAT---------MRTCWTMFLLAKGRALQMEDDLVISF 200
Query: 224 NGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGV--DLIASLCSIYDTSEDDLRKIM 281
L+ L + F+K+S+ + L S+ S + R+
Sbjct: 201 QLLLCTLEL-------------------FIKRSSPELLLPLYKSVVSKAQSPTRTSRRNQ 241
Query: 282 EKTNTLIADI-----LKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEK 336
K + + + L + C+ +EC +E ++N+ L F +LMD + K
Sbjct: 242 SKAKSRVVESEVNVELLETLCKDNECNAEEVKNVYQTSLSAFLDLMDLPIPDFLGTDVSK 301
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTIT---SP 393
Y G++D R+F + D+++L V+I+ R +P KT P
Sbjct: 302 QYQEHYLKSGDIDGRLFFDGDETVLAP------KVDISQVGR------TPKKTSPDDDGP 349
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCD 453
L P + TP+ AM + K LR + +PS+ LE + K+C
Sbjct: 350 LIPPQ-------------------TPIRAAMNSIKMLRGDLPSSGDQPSSNLEIYFKNCT 390
Query: 454 KDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLE 513
D T + + L + +G C+ ++ +R ++LYY+V+E
Sbjct: 391 VDPTQGIQSLEMLGLFSQKFGEAVGPHCI------------VYGRERFTLGVRLYYKVME 438
Query: 514 AMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------------- 557
AM ++ + L +N + LL + FH +LAC+ E+V+ T++ +
Sbjct: 439 AMLESKKKRLFVQNFSKLLNDSTFHMSLLACALEVVMVTYEESSFKNRGCSHGEGDQAVR 498
Query: 558 -MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
+ FP +L+ ++AFD KVIESFI+ E +L +++ +HL + E ++E + W GS ++
Sbjct: 499 DLCFPWILDVFDLSAFDFYKVIESFIKAEPTLSKDIIKHLETCENLIMEKIAWRTGSPLF 558
Query: 617 NSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG-GLSPVHSLHKHETSPGQNGD 675
L + E A+P S H + + LSP+ PG
Sbjct: 559 ELLKREHEAGATE------QAEPPASFSLPLQHNHTAVDLYLSPIR--------PGLR-- 602
Query: 676 IRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGG 735
+ P+ P T + S+P P Q+A +P +P
Sbjct: 603 VLPPESPATPS---------------------SQASSQPTP---QAAGQAPRQPK----- 633
Query: 736 ETCAETGINIFFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNR 793
+++F+ K+ +LA R+ + L LS + ++ LFQ L L +R
Sbjct: 634 ----SNSLSLFYKKLYRLAYTRLKTLCSCL-LSNHPDLEHVIWTLFQHTLQYEYDLMRDR 688
Query: 794 HIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQD 853
H+DQ+++ Y + K+ ++L F+ I+ Y+ P + F+ V + +E
Sbjct: 689 HLDQLMMSAMYAICKVKSVDLRFKLIVSAYKNMPNTSQETFKHVLI----------TEGQ 738
Query: 854 HVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPD 913
+ II FYN++F+ +K +++ + R ++ PC SP FP
Sbjct: 739 YDSIIVFYNQVFMQKLKTNILQYA-------STRPPTLSPIPQIPC--SP--YKFPN--- 784
Query: 914 MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNS 973
SP +V ++NVY+SPL+ S++ A + +GES + IN +NS
Sbjct: 785 -SPLRVPGSNNVYISPLKNSRLSAGMMAPRSRMLVSIGESFGF----ANRFQKINQMVNS 839
Query: 974 NRR 976
R
Sbjct: 840 GDR 842
>gi|185133477|ref|NP_001117728.1| retinoblastoma-associated protein [Oncorhynchus mykiss]
gi|4008032|gb|AAD13390.1| retinoblastoma 1 [Oncorhynchus mykiss]
Length = 910
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 209/910 (22%), Positives = 365/910 (40%), Gaps = 204/910 (22%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILS 163
F IL+ + LN+ F L + V I + + A RLE K+ +
Sbjct: 99 FTFTQILKAVDLNVKQFLGLLKKMDVNLDTISTKVNSA--VTRLE-KKYDVSRALYQRFE 155
Query: 164 KSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCT 223
K+ +IY E S+A G + R W +FL + A +LV
Sbjct: 156 KTCSKIYAE---DSEAKG-------------KEILRSCWTMFLLAKGRALQMEDELVISL 199
Query: 224 NGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
+ +V +L I P ++ S +S + S + S+ R+ +
Sbjct: 200 HLMVCVLEFFIRRCPPSLLQ-PLYQSVISTAQSP------PTRTSRRNQSKAKPRQAPPE 252
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----LEKDY 338
+ + + L C+ ++C E ++++ F +D SLS + ++ L K Y
Sbjct: 253 VDVQLLETL----CKENDCSVEEVKSVYQTS---FSAFLDSMSLSGTRDLPQATDLSKQY 305
Query: 339 DNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHR 398
+ + D R+F++ D++LL + + V T K P + P P
Sbjct: 306 EELYFKSRDFDSRLFLDNDETLL-TPKVEPMPVERTPRKNM------PEDVVLIP--PQ- 355
Query: 399 SSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTT 458
TPV AM + LR + +PS+ L + K+C D T
Sbjct: 356 -------------------TPVRAAMNSIAQLRVDLITSGDQPSSNLAVYFKNCTVDPTE 396
Query: 459 DVMRRAH---IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 515
+V++R ++ F +G RCV +QR ++LYYRV+E+M
Sbjct: 397 EVLQRVESLGLLFSQRF-GQAVGPRCVG------------LGKQRFTLGIRLYYRVMESM 443
Query: 516 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT----------------ML 559
+E + L +N + LL + FH +LAC+ E+ +AT+ T +
Sbjct: 444 LKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVAMATYGGSTFKNGGYSNGGVPVETDLC 503
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FP +L+ +TAFD KVIESFI+ E SL +++ +HL E ++E++ W + S ++ L
Sbjct: 504 FPWILDVFQLTAFDFYKVIESFIKAEPSLSKDIVKHLERCEHLIMETIAWREDSPLFELL 563
Query: 620 TVAR---PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDI 676
R PV AE P +L+ H N ++ L
Sbjct: 564 KRTREEGPVEQAE---------PPATLNQPLQH-NHTAADL------------------- 594
Query: 677 RSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFAS--PTRPNPGGG 734
+ SPV+ S+ LP P +A S P+ P P
Sbjct: 595 -------------------YLSPVRP--------SSRTLPAPESTAPPSSQPSAPAPHQT 627
Query: 735 GETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNR 793
+++F+ K+ +LA +R+ + +L S ++ ++ LFQ L L +R
Sbjct: 628 PRHPKSNSLSLFYKKLYRLAYMRLKMLYTQLLTSHPELEPIMWTLFQHTLQNEYELMRDR 687
Query: 794 HIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQD 853
H+DQ+++ Y + K+ ++L F+ I+ Y+ P + F+ V + E
Sbjct: 688 HLDQLMMSAMYAICKVKNVDLRFKTIVTAYKNMPNTNQETFKHVLI----------REGQ 737
Query: 854 HVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPD 913
+ II FYN +F+ +KTN + + P P +S P +P
Sbjct: 738 YDSIIVFYNLVFM--------------QKLKTNILQYAS-------PRPPTLSPIPHIPR 776
Query: 914 M------SPKKVSATHNVYVSPLRT-SKMDALISHSSKSYYACVGESTHAYQSPSKDLTD 966
SP +V ++NVY+SP+++ ++M +++ ++ +GES S
Sbjct: 777 SPYKFPNSPLRVPGSNNVYISPMKSPTRMSPVMTPRTR-ILVSIGESFGT----SDKFQK 831
Query: 967 INHRLNSNRR 976
IN +NS+ R
Sbjct: 832 INAMVNSSDR 841
>gi|194387624|dbj|BAG61225.1| unnamed protein product [Homo sapiens]
Length = 816
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 294/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 158 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 212
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 213 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 260
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 261 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 304
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 305 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 350
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 351 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 410
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 411 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 465
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 466 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 506
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 507 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 540
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 541 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 599
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 600 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 649
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ P P N+Y
Sbjct: 650 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP-----GGNIY 693
Query: 927 VSPLRT 932
+SPL++
Sbjct: 694 ISPLKS 699
>gi|190959|gb|AAA69807.1| retinoblastoma susceptibility protein [Homo sapiens]
Length = 928
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 296/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 270 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 324
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 325 YLKNKDLDRRLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNII-------PPH---- 372
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 373 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 416
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 417 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 462
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 463 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 522
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 523 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 577
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 578 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 618
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 619 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 652
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 653 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 711
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 712 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 761
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ SP ++ N+Y
Sbjct: 762 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPS----SPLRIPGG-NIY 805
Query: 927 VSPLRT 932
+SPL++
Sbjct: 806 ISPLKS 811
>gi|354487932|ref|XP_003506125.1| PREDICTED: retinoblastoma-associated protein-like [Cricetulus
griseus]
Length = 946
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 168/671 (25%), Positives = 289/671 (43%), Gaps = 153/671 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNAT 342
+T I ++L C+ EC + ++N+ I F N + S + + L K Y+
Sbjct: 289 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEELY 344
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
+LD R+F++ D +L P+ + + +P +S
Sbjct: 345 LKNKDLDARLFLDHDKTLQ----------------------TDPIDSFETERTPRKS--- 379
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+P+ A T TPV T M T + L ++ +PS L + +C + ++++
Sbjct: 380 NPDEEANVVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILK 436
Query: 463 R----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
R HI E ++ +G+ CV +Q L ++LYYRV+E+M +
Sbjct: 437 RVKDVGHIFKEKF--ANAVGQGCVDIGVQRYKL------------GVRLYYRVMESMLKS 482
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGI 569
E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L +
Sbjct: 483 EEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNL 542
Query: 570 TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 543 KAFDFYKVIESFIKVETNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSKD----- 597
Query: 630 INRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSV 689
G D + S + S L H+ SP IRSPK+ RS
Sbjct: 598 ----GEGPDHLESACPL-------SLPLQSNHTAADMYLSP-----IRSPKK-----RSS 636
Query: 690 LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCK 749
N+ T+ L+ K PL+S T +++F+ K
Sbjct: 637 TTRVNSATNTETQAASALHTQK------PLKS-------------------TSLSLFYKK 671
Query: 750 INKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVA 807
+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 672 VYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMKDRHLDQIMMCSMYGIC 730
Query: 808 KISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVP 867
K+ ++L F+ I+ Y+ P + F+ V + E++ II FYN +F+
Sbjct: 731 KVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSIIVFYNSVFMQ 780
Query: 868 AVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT----- 922
+K +++ P +S P +P SP K S++
Sbjct: 781 RLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPLRIP 818
Query: 923 -HNVYVSPLRT 932
N+Y+SPL++
Sbjct: 819 GGNIYISPLKS 829
>gi|168275724|dbj|BAG10582.1| retinoblastoma-associated protein [synthetic construct]
Length = 928
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 296/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 270 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 324
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 325 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 372
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 373 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 416
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 417 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 462
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 463 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 522
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 523 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 577
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 578 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 618
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 619 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 652
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 653 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 711
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 712 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 761
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ SP ++ N+Y
Sbjct: 762 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPS----SPLRIPGG-NIY 805
Query: 927 VSPLRT 932
+SPL++
Sbjct: 806 ISPLKS 811
>gi|62087156|dbj|BAD92025.1| Retinoblastoma-associated protein variant [Homo sapiens]
Length = 960
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 296/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 302 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 356
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 357 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 404
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 405 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 448
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 449 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 494
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 495 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 554
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 555 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 609
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 610 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 650
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 651 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 684
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 685 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 743
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 744 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 793
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ SP ++ N+Y
Sbjct: 794 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPS----SPLRIPGG-NIY 837
Query: 927 VSPLRT 932
+SPL++
Sbjct: 838 ISPLKS 843
>gi|410947412|ref|XP_003980441.1| PREDICTED: retinoblastoma-associated protein [Felis catus]
Length = 921
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 172/676 (25%), Positives = 290/676 (42%), Gaps = 165/676 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ + +S + L K
Sbjct: 264 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSK 313
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L A P + +P
Sbjct: 314 QYEEIYLKNKDLDARLFLDHDKTLQ----------------------ADPTDSFEMQRTP 351
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
+SS+ + + TPV T M T + L ++ +PS L + +C +
Sbjct: 352 RKSSSDE------EVNTMLPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 405
Query: 457 TTDVMRRAHIILEAIFP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I IF + +G+ C+ GS QR ++LYYRV+
Sbjct: 406 KESILKRVKDI-GCIFKEKFAKAVGQGCMEIGS-------------QRYKLGVRLYYRVM 451
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 452 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWI 511
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 512 LNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 571
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P L++ T S L H+ SP IRSPK+
Sbjct: 572 -------DREG----PADHLESACTL----SLPLQSNHTAADMYLSP-----IRSPKKKG 611
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
T R N T+ + + SAF + + T +
Sbjct: 612 TT-------RVNSTANTEAQ---------------ATSAFQT---------QKPLKSTSL 640
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C
Sbjct: 641 SLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 699
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 700 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFY 749
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ P +S P +P SP K S+
Sbjct: 750 NSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIPR-SPYKFSS 787
Query: 922 T------HNVYVSPLR 931
+ N+Y+SPL+
Sbjct: 788 SPLRIPGGNIYISPLK 803
>gi|108773787|ref|NP_000312.2| retinoblastoma-associated protein [Homo sapiens]
gi|397480396|ref|XP_003811470.1| PREDICTED: retinoblastoma-associated protein [Pan paniscus]
gi|132164|sp|P06400.2|RB_HUMAN RecName: Full=Retinoblastoma-associated protein; AltName:
Full=p105-Rb; AltName: Full=pRb; Short=Rb; AltName:
Full=pp110
gi|190946|gb|AAA69806.1| retinoblastoma-associated protein [Homo sapiens]
gi|190963|gb|AAA69808.1| retinoblastoma suceptibility protein [Homo sapiens]
gi|292421|gb|AAA53483.1| retinoblastoma susceptibility protein [Homo sapiens]
gi|521212|gb|AAA53484.1| retinoblastoma susceptibility protein [Homo sapiens]
gi|793995|gb|AAB59465.1| retinoblastoma suspectibility protein [Homo sapiens]
gi|24660140|gb|AAH39060.1| Retinoblastoma 1 [Homo sapiens]
gi|26252120|gb|AAH40540.1| Retinoblastoma 1 [Homo sapiens]
gi|119629198|gb|EAX08793.1| retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo
sapiens]
gi|119629199|gb|EAX08794.1| retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo
sapiens]
gi|123981322|gb|ABM82490.1| retinoblastoma 1 (including osteosarcoma) [synthetic construct]
gi|123996153|gb|ABM85678.1| retinoblastoma 1 (including osteosarcoma) [synthetic construct]
gi|158255952|dbj|BAF83947.1| unnamed protein product [Homo sapiens]
Length = 928
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 294/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 270 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 324
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 325 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 372
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 373 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 416
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 417 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 462
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 463 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 522
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 523 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 577
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 578 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 618
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 619 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 652
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 653 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 711
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 712 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 761
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ P P N+Y
Sbjct: 762 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP-----GGNIY 805
Query: 927 VSPLRT 932
+SPL++
Sbjct: 806 ISPLKS 811
>gi|332841285|ref|XP_509777.3| PREDICTED: retinoblastoma-associated protein [Pan troglodytes]
gi|410214624|gb|JAA04531.1| retinoblastoma 1 [Pan troglodytes]
gi|410264018|gb|JAA19975.1| retinoblastoma 1 [Pan troglodytes]
gi|410307218|gb|JAA32209.1| retinoblastoma 1 [Pan troglodytes]
Length = 928
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 171/666 (25%), Positives = 294/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 270 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 324
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 325 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 372
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 373 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 416
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 417 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 462
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 463 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 522
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 523 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 577
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 578 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 618
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 619 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 652
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 653 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 711
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 712 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 761
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ P P N+Y
Sbjct: 762 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP-----GGNIY 805
Query: 927 VSPLRT 932
+SPL++
Sbjct: 806 ISPLKS 811
>gi|322789792|gb|EFZ14956.1| hypothetical protein SINV_13137 [Solenopsis invicta]
Length = 965
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 234/948 (24%), Positives = 418/948 (44%), Gaps = 152/948 (16%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
D+ R DLC+ L++D E K + + N E + W +
Sbjct: 2 DSMYGRHQDLCQK-LNMDAVAASEAWKSYETIRQ----------NYTLEGDQLHWIGCAV 50
Query: 82 YLV-RRLS----EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
Y+ R+ S + G N++ N +L +L++ L ++ FF + KS ++
Sbjct: 51 YVACRKFSIPTVGRPGTNVE----GNCVSLTRLLQLCNLPLIQFFTK-----SKSWADMA 101
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAA---ASTSGY 193
N+ D+ R+E +L+ANF ++ K Y+ I+ + F + K S + +T
Sbjct: 102 NM-PQDFRARIE--KLEANFSVSMVIFKKYQPIFSDIFKDPREDTSKPSRSRRHKATPCT 158
Query: 194 ISDYHRFGWLLFLALR--IHAFS-----RFKDLVTCTNGLV--SILA----ILIIHVPVR 240
S F W LF+ ++ IH S + L+ C + + ++LA +L + P
Sbjct: 159 PSRVFEFCWTLFICIKGAIHDISDDLVNSYHLLLVCCDLIYNNALLANRKDLLNPNFPGL 218
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEA 299
NFN D+ + +N V+L LC +D + + I E I + +K
Sbjct: 219 PANFN-DDNYTPPQTANCIVNL---LCERHDAIAVEAKAIKEYCVRNYINKLFNEKTLRG 274
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-D 358
+ F +++ + S+ + K Y+ + G+ DER+F+ +D +
Sbjct: 275 DQSN--------------FSGMLEAMNFDSNNKAINKSYEQRMLSVGDFDERIFLGQDAN 320
Query: 359 SLLGSGSLSGGAVNITG----AKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSK 414
+GS + +NI + K + A +PL+ + S
Sbjct: 321 ENIGSPT---QMMNIEDFHEQLQLKREQHAGQYLAPPTPLTGRKYLRSK---------DM 368
Query: 415 MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPS 474
+TPV+TA + L+ +I S PS L + L +C +DV + + + I E F S
Sbjct: 369 SNITPVTTATQSVIKLQALIAG-QSAPSESLLQMLNNCSQDVKSSLEAKVKQIGEQ-FCS 426
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
+ +T + G+ + ++R L L+Y++LE + E + ++T+LL N
Sbjct: 427 NYNSNADMTNANDGSAF---DFGKKRLLMGQTLFYKLLEVILNDEKRKKPNDDITNLLLN 483
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
E F +C+ AC E+V+ ++K+ +FP +L+ + A+ KVIE IR E+ L R++ +
Sbjct: 484 EVFIQCLFACCLEIVIYSYKSNDKIFPWILKALNLDAYYFYKVIEIIIRAEDQLSRDVVK 543
Query: 595 HLNSLEERLLESMVWEKGSSMYNSL-----------TVARP--VLSAEINRLGLLADPMP 641
HLN +EE++LES+ W+ S ++ ++ VA P + +A++N G
Sbjct: 544 HLNHIEEKILESLAWQSDSPLWQTIESLPDGVPSCEEVALPGTLETADLNTSGQPILRRV 603
Query: 642 SLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR----SVLVERNNFT 697
+LD TH SP+ S + SP + + KR ++ R SVL +
Sbjct: 604 TLDRERTH----DVQQSPISSASERFQSPIAASGV-AKKRLFSETRVTGQSVLRVGQSVL 658
Query: 698 SPVKDRLLGLNNLKSKPLPPPL---QSAFASPTRPNPGGGGETCA----ETG-INIFFCK 749
S +R+L N + LP + +S+ + T NP A TG + +FF K
Sbjct: 659 S--SNRMLLDNGQRILLLPDQIAVSKSSGTTQTLNNPTQATNRDATKPKRTGSVALFFRK 716
Query: 750 INKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKI 809
LA VR+ + L++S ++ ++ +F+ + +R L +RH+DQI++C Y + K+
Sbjct: 717 FYNLACVRMQDLCNSLEISDNDKKKIWTIFEYSIKER-KLMKDRHLDQILMCAIYVICKL 775
Query: 810 SQLNL-TFREIIYNYRKQPQCKPQVFRSVFVDWASARQ----SG--RSEQDHV------- 855
++ +F EI+ YR QPQ + ++RSV + S + SG RSE +++
Sbjct: 776 VRMERNSFTEIMRCYRLQPQAESHIYRSVLIKKVSNDEDPGTSGNERSEDNNMLGENITP 835
Query: 856 -------------------DIITFYNKIFVPAVKPLLVELGPA-GTAM 883
D+I FYNK++VP VK + G G+ M
Sbjct: 836 PTPTNMTGTSQNFNGEIRDDLIKFYNKVYVPQVKEFANKFGSTRGSVM 883
>gi|508202|gb|AAA19644.1| Rb [Gallus gallus]
Length = 919
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 161/669 (24%), Positives = 294/669 (43%), Gaps = 144/669 (21%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDNA 341
T+T + +IL C+ +C + ++N+ I F N + S+ +++L K YD
Sbjct: 258 TDTKVIEIL----CKEHDCNLDEVKNVYFTSFIPFLNSLGVVASNGLPEVDVLSKQYDEL 313
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
++D R+F++ D++L ++ + T K D + V
Sbjct: 314 YLKNKDIDARLFLDHDETL-QPDVIACSQLERTPRKNNPDEEVNHV-------------- 358
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+ TPV AM T + L ++ KPS L + +C + ++
Sbjct: 359 -------------LPQTPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSIL 405
Query: 462 RR----AHIILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+R HI + + +G+ C GS QR ++LYYRV+E+M
Sbjct: 406 KRVECLGHIFKKKF--AEAVGQGCAEIGS-------------QRYQLGVRLYYRVMESML 450
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT-----------MLFPAVLE 565
+E + L N + LL + FH +LAC+ E+V+AT+ + FP +L
Sbjct: 451 KSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQSDGTSAETDLSFPWILN 510
Query: 566 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
+ AFD KVIESFI+ E SL R++ +HL E R++ES+ W+ S +++ + ++
Sbjct: 511 VFDLKAFDFYKVIESFIKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-- 568
Query: 626 LSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTD 685
R G P P+ + +N P+ H H + +RSPK+ +
Sbjct: 569 -----EREGQTDQPEPT-----STLNL------PLQ--HNHTAADLYLSPVRSPKKKASG 610
Query: 686 YRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINI 745
+ G + ++P SA + +P T +++
Sbjct: 611 HPQS----------------GTSGPDAQP------SATSQTQKPQ--------KSTSLSL 640
Query: 746 FFCKINKLAAVRINAMVERLQLSQQ--IRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
F+ K+ +LA +R++ + RL LS+ + ++ LFQ L + L +RH+DQI++C
Sbjct: 641 FYKKVFRLAYLRLHTLFFRL-LSEHPDLEPLIWTLFQHTLQNESELMRDRHLDQIMMCSM 699
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
YG+ K+ ++L F+ I+ Y++ P + F+ V + E+ + II FYN
Sbjct: 700 YGICKVKNVDLRFKTIVSAYKELPNTNQETFKRVLI----------REEQYDSIIVFYNL 749
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH 923
+F+ +K +++ +NR ++ P P P+ P SP++ +A +
Sbjct: 750 VFMQKLKTNILQYA-------SNRPPTLS-----PIPHIPRS---PYQFSNSPRR-AAGN 793
Query: 924 NVYVSPLRT 932
N+Y+SPL++
Sbjct: 794 NIYISPLKS 802
>gi|386782129|ref|NP_001247976.1| retinoblastoma-associated protein [Macaca mulatta]
gi|383410451|gb|AFH28439.1| retinoblastoma-associated protein [Macaca mulatta]
gi|383410453|gb|AFH28440.1| retinoblastoma-associated protein [Macaca mulatta]
gi|387540698|gb|AFJ70976.1| retinoblastoma-associated protein [Macaca mulatta]
Length = 928
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 172/671 (25%), Positives = 294/671 (43%), Gaps = 152/671 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ L +S + L K
Sbjct: 270 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVESLSK 319
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L + S+ T K D + + P
Sbjct: 320 RYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PP 371
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
H TPV T M T + L ++ +PS L + +C +
Sbjct: 372 H--------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 411
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ CV GS QR ++LYYRV+
Sbjct: 412 KESILKRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVM 457
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 458 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWI 517
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 518 LNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK 577
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P ++ A +N L H+ SP +RSPK+
Sbjct: 578 -------DREG----PTDHFES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKG 617
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R N T+ + + SAF + + T +
Sbjct: 618 S------TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSL 647
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C
Sbjct: 648 SLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 706
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 707 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFY 756
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ + + +S + H P SP FP+ P P
Sbjct: 757 NSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP----- 800
Query: 922 THNVYVSPLRT 932
N+Y+SPL++
Sbjct: 801 GGNIYISPLKS 811
>gi|380798509|gb|AFE71130.1| retinoblastoma-associated protein, partial [Macaca mulatta]
gi|380798511|gb|AFE71131.1| retinoblastoma-associated protein, partial [Macaca mulatta]
Length = 914
Score = 179 bits (455), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 172/671 (25%), Positives = 294/671 (43%), Gaps = 152/671 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ L +S + L K
Sbjct: 256 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVESLSK 305
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L + S+ T K D + + P
Sbjct: 306 RYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PP 357
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
H TPV T M T + L ++ +PS L + +C +
Sbjct: 358 H--------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 397
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ CV GS QR ++LYYRV+
Sbjct: 398 KESILKRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVM 443
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 444 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWI 503
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 504 LNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK 563
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P ++ A +N L H+ SP +RSPK+
Sbjct: 564 -------DREG----PTDHFES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKG 603
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R N T+ + + SAF + + T +
Sbjct: 604 S------TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSL 633
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C
Sbjct: 634 SLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 692
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 693 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFY 742
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ + + +S + H P SP FP+ P P
Sbjct: 743 NSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP----- 786
Query: 922 THNVYVSPLRT 932
N+Y+SPL++
Sbjct: 787 GGNIYISPLKS 797
>gi|402901984|ref|XP_003913911.1| PREDICTED: retinoblastoma-associated protein [Papio anubis]
Length = 923
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 172/671 (25%), Positives = 294/671 (43%), Gaps = 152/671 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ L +S + L K
Sbjct: 265 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVESLSK 314
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L + S+ T K D + + P
Sbjct: 315 RYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PP 366
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
H TPV T M T + L ++ +PS L + +C +
Sbjct: 367 H--------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 406
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ CV GS QR ++LYYRV+
Sbjct: 407 KESILKRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVM 452
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 453 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWI 512
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 513 LNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK 572
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P ++ A +N L H+ SP +RSPK+
Sbjct: 573 -------DREG----PTDHFES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKG 612
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R N T+ + + SAF + + T +
Sbjct: 613 S------TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSL 642
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C
Sbjct: 643 SLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 701
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 702 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFY 751
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ + + +S + H P SP FP+ P P
Sbjct: 752 NSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP----- 795
Query: 922 THNVYVSPLRT 932
N+Y+SPL++
Sbjct: 796 GGNIYISPLKS 806
>gi|224043382|ref|XP_002198362.1| PREDICTED: retinoblastoma-associated protein [Taeniopygia guttata]
Length = 919
Score = 179 bits (454), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 167/676 (24%), Positives = 287/676 (42%), Gaps = 157/676 (23%)
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSS----LNILEKDYD 339
T+T I +IL C+ +C + ++N+ I F N S L+S+ + ++ K YD
Sbjct: 256 TDTKIIEIL----CKEHDCNLDEVKNVYFTSFIPFLN--SASILASNGLPEVEVILKQYD 309
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
++D R+F+N D++L + +R +PVK
Sbjct: 310 ELYVKNKDIDARLFLNHDETL------QPDVRACSQLER------TPVK----------- 346
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
N + TPV AM + L ++ KPS L ++ +C +
Sbjct: 347 -----NNPDEEINIILPQTPVRAAMNNIQQLIMILNSATDKPSDTLIKYFNNCTVNPKDS 401
Query: 460 VMRRA----HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAE---QRRLEALKLYYRVL 512
+++R HI + + G G WAE QR ++LYYRV+
Sbjct: 402 ILKRVESFDHIFKKKFAEAVGQG-----------------WAETGSQRYKLGVRLYYRVM 444
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH-----------KTVTMLFP 561
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ + FP
Sbjct: 445 ESMLKSEEERLSVQNFSKLLNDNIFHTSLLACALEVVMATYGRNASQSDNTSAETDLSFP 504
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
+L + AFD KVIESFIR E SL RE+ +HL E R++ES+ W+ GS +++ +
Sbjct: 505 WILNVFDLKAFDFYKVIESFIRAEPSLTREMIKHLEHCEHRIMESLAWQSGSPLFDRIKE 564
Query: 622 ARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKR 681
++ R G P P +S P H H + ++SPK+
Sbjct: 565 SK-------EREGQTDQPEP-----------TSTPNMPFQ--HNHTAADLYLSPVKSPKK 604
Query: 682 PCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGET---C 738
+ PPL + SP P +T
Sbjct: 605 KASG-------------------------------PPLSA--TSPPDAQPAVTPQTQKVQ 631
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHID 796
T +++F+ K+ LA R++ + L LS+ ++ ++ LFQ L L +RH+D
Sbjct: 632 KSTSLSLFYKKVYLLAYRRLHTLFLHL-LSEHPELEPLIWTLFQHTLQNEYELMRDRHLD 690
Query: 797 QIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVD 856
QI++C YG+ K+ ++L F+ I+ Y++ + F+ V + E+ +
Sbjct: 691 QIMMCSMYGICKVKNVDLQFKMIVSAYKELCNTNQETFKRVLI----------REEKYDS 740
Query: 857 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSP 916
II FYN +F+ +K +++ ++R ++ P P P+ P SP
Sbjct: 741 IIVFYNLVFMQKLKTNILQYA-------SSRPPTLS-----PIPHIPRS---PYQFSNSP 785
Query: 917 KKVSATHNVYVSPLRT 932
++V A +N+Y+SPL++
Sbjct: 786 RRVPAGNNIYISPLKS 801
>gi|395848164|ref|XP_003796729.1| PREDICTED: retinoblastoma-associated protein [Otolemur garnettii]
Length = 927
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 175/677 (25%), Positives = 296/677 (43%), Gaps = 164/677 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSSLNI-----LEK 336
+T I ++L C+ EC NID +YF+N M+ ++SS + L K
Sbjct: 269 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGIASSNGLPEVENLSK 318
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L + S+ T K ++ A V I SP
Sbjct: 319 RYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRK---NNAAEEVNVI----SP 370
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
H TPV T M T + L ++ +PS L + +C +
Sbjct: 371 H--------------------TPVRTVMNTIQQLMMILNSSSDQPSENLISYFNNCTVNP 410
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ CV GS QR ++LYYRV+
Sbjct: 411 KESILKRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVM 456
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +
Sbjct: 457 ESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWI 516
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 517 LNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK 576
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G AD + S A +N L H+ SP +RSPK+
Sbjct: 577 -------DREG-SADHLES----ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKG 616
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R N T+ + + SAF + + T +
Sbjct: 617 S------TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSL 646
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + RL LS+ ++ ++ LFQ L L +RH+DQI++C
Sbjct: 647 SLFYKKVYRLAYLRLNTLCARL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 705
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 706 SMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEYDSIIVFY 755
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ P +S P +P SP K S+
Sbjct: 756 NSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSS 793
Query: 922 T------HNVYVSPLRT 932
+ N+Y+SPL++
Sbjct: 794 SPLRIPGGNIYISPLKS 810
>gi|225756|prf||1312364A nuclear phosphoprotein
Length = 928
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 170/666 (25%), Positives = 294/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 270 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 324
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 325 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 372
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 373 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 416
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 417 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 462
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 463 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 522
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ ++L E R++ES+ W S +++ + ++
Sbjct: 523 LKAFDFYKVIESFIKAEGNLTREMIKNLERCEHRIMESLAWLSDSPLFDLIKQSK----- 577
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 578 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 618
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 619 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 652
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 653 KVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 711
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 712 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 761
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ P P N+Y
Sbjct: 762 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPSSPLRIP-----GGNIY 805
Query: 927 VSPLRT 932
+SPL++
Sbjct: 806 ISPLKS 811
>gi|351705118|gb|EHB08037.1| Retinoblastoma-associated protein, partial [Heterocephalus glaber]
Length = 883
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 160/672 (23%), Positives = 285/672 (42%), Gaps = 154/672 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDNAT 342
+T I ++L C+ EC + ++N+ I F N + S+ + L K Y+
Sbjct: 225 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVTSNGLPEVESLSKQYEEIY 280
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
++D R+F++ D +L P+ + +P +S+
Sbjct: 281 LKNKDIDARLFLDHDKTLQ----------------------TDPIDSFEMQRTPQKSNPD 318
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+ T PV T M T + L ++ +PS L + +C + ++++
Sbjct: 319 EEVNVIPPHT------PVRTVMNTIQQLMMILNSSSDQPSEILISYFNNCTVNPKENILK 372
Query: 463 R----AHIILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
R HI E ++ +G+ CV GS QR ++LYYRV+E+M
Sbjct: 373 RVKDIGHIFKEKF--ANAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 417
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 418 SEEERLSIQNFSKLLNDNVFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLN 477
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 478 LKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 532
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+ A H+ + P+ + H + IRSPKR +
Sbjct: 533 -------------DQEGPAEHLESTCPLNLPLQ--NNHTAADMYLSPIRSPKRKGS---- 573
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 574 --TTRGNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 607
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 608 KVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMKDRHLDQIMMCSMYGI 666
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 667 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSVFM 716
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT---- 922
+K +++ P +S P +P SP K S++
Sbjct: 717 QRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPLRI 754
Query: 923 --HNVYVSPLRT 932
N+Y+SPL++
Sbjct: 755 PGGNIYISPLKS 766
>gi|291190170|ref|NP_001167086.1| Retinoblastoma-associated protein [Salmo salar]
gi|223648042|gb|ACN10779.1| Retinoblastoma-associated protein [Salmo salar]
Length = 910
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 211/911 (23%), Positives = 365/911 (40%), Gaps = 206/911 (22%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILS 163
F IL+ + LN+ F L + V I + + A RLE K+ +
Sbjct: 99 FTFTQILKAVDLNVKQFLGLLKKMDVNLDTISTKVNSA--VTRLE-KKYDVSRALYQRFE 155
Query: 164 KSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCT 223
K+ IY E S+A G + R W +FL + A DLV
Sbjct: 156 KTCSTIYAE---DSEAKG-------------KEILRSCWTMFLLAKGRALQMEDDLVISF 199
Query: 224 NGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK 283
+ +V +L I P H S + + S + S+ R+ +
Sbjct: 200 HLMVCVLEFFIRRCPPSL--LQPHYQSVISTAQSP-----PTRTSRRNQSKAKPRQAPPE 252
Query: 284 TNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----LEKDY 338
+ + + L C+ ++C E ++++ F +D SLS + ++ L K Y
Sbjct: 253 VDVQLLESL----CKENDCSVEEVKSVYQTS---FSAFLDSMSLSGTRDLPQATDLSKQY 305
Query: 339 DNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHR 398
+ + D R+F++ D++LL + + V T K P + P P
Sbjct: 306 EELYFKSRDFDSRLFLDNDETLL-TPKVEPMPVERTPRKN------LPEDVVLIP--PQ- 355
Query: 399 SSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTT 458
TPV AM + LR + +PSA L + K+C D T
Sbjct: 356 -------------------TPVRAAMNSIAQLRVDLTTSGDQPSANLAVYFKNCTVDPTE 396
Query: 459 DVMRRAH---IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 515
+V++R ++ F +G RCV +QR ++LYYRV+E+M
Sbjct: 397 EVLQRVESLGLLFSQRF-GQAVGPRCVG------------LGKQRFTLGIRLYYRVMESM 443
Query: 516 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT----------------ML 559
+E + L +N + LL + FH +LAC+ E+V+AT+ T +
Sbjct: 444 LKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGGSTFKSAGYSNGGVPVETDLC 503
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FP +L+ +TAFD KVIESFI+ E SL +++ +HL E ++E++ W + S ++ L
Sbjct: 504 FPWILDVFQLTAFDFYKVIESFIKAEPSLSKDMVKHLERCEHLIMETIAWREDSPLFELL 563
Query: 620 TVAR---PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDI 676
R PV AE P +L+ H N ++ L
Sbjct: 564 KRTREEGPVEQAE---------PPATLNQPLQH-NHTAADL------------------- 594
Query: 677 RSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGE 736
+ SPV+ S+ LP P +A S ++P+ +
Sbjct: 595 -------------------YLSPVRP--------SSRTLPAPESTAPPS-SQPSALATHQ 626
Query: 737 T---CAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFN 792
T +++F+ K+ +LA +R+ + +L S ++ ++ LFQ L L +
Sbjct: 627 TPRHPKSNSLSLFYKKLYRLAYMRLKMLYTQLLTSHPELEPIMWTLFQHTLQNEYELMRD 686
Query: 793 RHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ 852
RH+DQ+++ Y + K+ ++L F+ I+ Y+ P + F+ V + E
Sbjct: 687 RHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKNMPNTNQETFKHVLI----------REG 736
Query: 853 DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALP 912
+ II FYN +F+ +KTN + + P P +S P +P
Sbjct: 737 QYDSIIVFYNLVFM--------------QKLKTNILQYAS-------PRPPTLSPIPHIP 775
Query: 913 DM------SPKKVSATHNVYVSPLRT-SKMDALISHSSKSYYACVGESTHAYQSPSKDLT 965
SP +V ++NVY+SP+++ ++M +++ ++ +GES S
Sbjct: 776 RSPYKFPNSPLRVPGSNNVYISPMKSPTRMSPVMTPRTR-ILVSIGESFGT----SDKFQ 830
Query: 966 DINHRLNSNRR 976
IN +NS+ R
Sbjct: 831 KINAMVNSSDR 841
>gi|338715461|ref|XP_001490611.3| PREDICTED: retinoblastoma-associated protein [Equus caballus]
Length = 835
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 168/677 (24%), Positives = 292/677 (43%), Gaps = 166/677 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ + +S + L K
Sbjct: 179 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSK 228
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D++L A P + +P
Sbjct: 229 QYEEIYLKNKDLDARLFLDHDETLQ----------------------ADPADSFEMQRTP 266
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
+S++ + + TPV T M T + L ++ +PS L + C +
Sbjct: 267 RKSNSDEEVNVI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNYCTVNP 320
Query: 457 TTDVMRR----AHIILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRV 511
+++R +I E + +G+ C+ GS QR ++LYYRV
Sbjct: 321 KESILKRVTDIGYIFKEKF--AKAVGQGCMEIGS-------------QRYKLGVRLYYRV 365
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPA 562
+E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP
Sbjct: 366 MESMLKSEEERLSIQNFSKLLNDNVFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPW 425
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A
Sbjct: 426 ILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 485
Query: 623 RPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRP 682
+ +R G P L++ T +N L H+ SP +RSPK+
Sbjct: 486 K-------DREG----PADHLESACT-LNLP---LQNNHTAADMYLSP-----VRSPKKK 525
Query: 683 CTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG 742
+ R N T+ + + SAF + + T
Sbjct: 526 GS------TTRVNSTANAEAQ---------------ATSAFQT---------QKPVKSTS 555
Query: 743 INIFFCKINKLAAVRINAMVERLQLS--QQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+++F+ K+ +LA +R+N + RL LS +++ ++ LFQ L L +RH+DQI++
Sbjct: 556 LSLFYKKVYRLAYLRLNTLCTRL-LSDHRELEHIIWTLFQHTLQNEYELMRDRHLDQIMM 614
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II F
Sbjct: 615 CSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVF 664
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN +F+ +K +++ P +S P +P SP K S
Sbjct: 665 YNSVFMQRLKTNILQYAST---------------------RPPALSPIPHIPR-SPYKFS 702
Query: 921 AT------HNVYVSPLR 931
++ N+Y+SPL+
Sbjct: 703 SSPLRIPGGNIYISPLK 719
>gi|432104196|gb|ELK31018.1| Retinoblastoma-associated protein [Myotis davidii]
Length = 886
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 171/679 (25%), Positives = 296/679 (43%), Gaps = 166/679 (24%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNIL 334
+ +T I ++L C+ EC NID +YF+N M+ + +S + L
Sbjct: 226 ENDTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESL 275
Query: 335 EKDYDNA-TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP 393
K Y+ +NKG LD R+F++ D +L A P+ +
Sbjct: 276 SKQYEEIYLKNKG-LDARLFLDHDKTLQ----------------------ADPIDSFEMQ 312
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCD 453
+P +S+ + + TPV T M T + L ++ +PS L + +C
Sbjct: 313 RTPRKSNNDEELNVI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCT 366
Query: 454 KDVTTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYY 509
+ +++R I + F + +G+ C+ GS QR ++LYY
Sbjct: 367 VNPMESILKRVQDIGYIFKEKF-AKAVGQGCIEIGS-------------QRYKLGVRLYY 412
Query: 510 RVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLF 560
RV+E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + F
Sbjct: 413 RVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSF 472
Query: 561 PAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
P +L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ +
Sbjct: 473 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 532
Query: 621 VARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPK 680
A+ +R G P L++ T +N L H+ SP +RSPK
Sbjct: 533 QAK-------DREG----PGDHLESACT-LNLP---LQNNHTAADMYLSP-----VRSPK 572
Query: 681 RPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE 740
+ + R N T+ + + + SAF + +
Sbjct: 573 KKGS------TTRVNSTANAEAQ---------------VTSAFQT---------QKPLKS 602
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI
Sbjct: 603 TSLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 661
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 662 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSII 711
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKK 918
FYN +F+ +K +++ P +S P +P SP K
Sbjct: 712 VFYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIPR-SPYK 749
Query: 919 VSAT------HNVYVSPLR 931
S++ N+Y+SPL+
Sbjct: 750 FSSSPLRIPGGNIYISPLK 768
>gi|327261143|ref|XP_003215391.1| PREDICTED: retinoblastoma-associated protein-like [Anolis
carolinensis]
Length = 901
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 186/758 (24%), Positives = 316/758 (41%), Gaps = 157/758 (20%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
+ W++FL + DLV L+ L I +P +K+ K
Sbjct: 165 KLCWIMFLLAKGKILQMEDDLVISFQLLLCTLDYFIKLLP-----------PAILKEPYK 213
Query: 259 GVDLIASLCSIYDTSEDDLRKI-MEKTNTLIADILKKKPCEASECKSENLENIDTDGLIY 317
+ S SI R M K +T I ++++ C+ +C + ++N+ I
Sbjct: 214 SLSAGCSNSSIRTGRRSQNRNTRMSKPDTDIIKVIEEL-CKTHDCNLDEVKNVYFTSFIP 272
Query: 318 FENLMDDSSLSSSLNI--LEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITG 375
F N M ++ S + L + Y+ ++D R+F+ +D G L
Sbjct: 273 FLNSMGITAFSGLPEVENLSRIYEEMYLKNKDIDARLFLEKD------GILQYEHTECLQ 326
Query: 376 AKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV--TPVSTAMTTAKWLRTV 433
+R +P ++S G +V+ TPV TAM T + L +
Sbjct: 327 LER----------------TPTKNS---------GEDLLIVLPQTPVRTAMNTIQQLVMI 361
Query: 434 ICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---SSGLGERCVTGSLQGAN 490
+ KPS L + +C + T D++ R L IF + +G+RC
Sbjct: 362 LNSASDKPSDNLISYFNNCTVNPTHDIVERVEN-LGRIFKEKFAEAVGQRCA-------- 412
Query: 491 LMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVL 550
I +++ RL ++LYYRV+E++ +E + L N + LL N FH +LAC+ E+V+
Sbjct: 413 ---EIGSQRYRL-GVRLYYRVMESILKSEEKRLSIHNFSKLLNNNTFHASLLACALEVVV 468
Query: 551 ATHKTVT-------------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
AT+ T T + FP ++ + AFDL KVIESFI+ E SL RE+ +HL
Sbjct: 469 ATYGTSTNASQGDAMNMETNLSFPWIINILDLKAFDLYKVIESFIKAEPSLTREMIKHLE 528
Query: 598 SLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGL 657
E +++ES+ W+ S ++ + ++ R G +P P S
Sbjct: 529 CCEHQIMESLAWQSDSPLFELIKQSK-------ERDGQPDEPEP-----------PSYIT 570
Query: 658 SPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPP 717
PV H H + +SPK R F++ V S P
Sbjct: 571 QPVQ--HNHTAADLYLSPTKSPK------------RKAFSTSV----------CSAPDSQ 606
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESV 775
P P + T +++F+ K+ LA R++ + RL LS+ +++ +
Sbjct: 607 P----------PVINQSQKLYKSTSLSLFYKKVYWLAYKRLSNLCSRL-LSEHPELKHLI 655
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFR 835
+ LF L L +RH+DQI++C YG+ K+ ++L F+ I+ Y++ + F+
Sbjct: 656 WTLFHHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLRFKTIVTAYKELTNANQETFK 715
Query: 836 SVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNN 895
V + E + II FYN +F+ +K +++ + +
Sbjct: 716 CVLI----------REGQYDSIIVFYNLVFMQRLKTNILQYASSRPPTLS---------- 755
Query: 896 DGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTS 933
P P PK P SP +VSA +N+Y+SPL++S
Sbjct: 756 --PIPHIPKS---PYKLSNSPLRVSAGNNIYISPLKSS 788
>gi|301767484|ref|XP_002919165.1| PREDICTED: retinoblastoma-associated protein-like [Ailuropoda
melanoleuca]
Length = 925
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 165/672 (24%), Positives = 291/672 (43%), Gaps = 152/672 (22%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + S+ + L K Y+
Sbjct: 265 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSKQYEE 320
Query: 341 ATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSS 400
+LD R+F++ D +L A P+ + +P +S+
Sbjct: 321 IYLKNKDLDARLFLDHDKTLQ----------------------ADPIDSFEMQRTPRKSN 358
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
+ + + TPV T M T + L ++ +PS L + +C + +
Sbjct: 359 SDEEVNVI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESI 412
Query: 461 MRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
++R I + F + +G+ C+ GS QR ++LYYRV+E+M
Sbjct: 413 LKRVKDVGYIFKEKF-AKAVGQGCMEIGS-------------QRYKLGVRLYYRVMESML 458
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERT 567
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 459 KSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRNTSQNLDTGTDLSFPWILNVL 518
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 519 NLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK---- 574
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR 687
+R G P L++ T +N L H+ SP +RSPK+ + R
Sbjct: 575 ---DREG----PADHLESACT-LNLP---LQSNHTAADMYLSP-----VRSPKKKGSTIR 618
Query: 688 SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFF 747
N T+ + + SAF + + T +++F+
Sbjct: 619 V------NSTANTEAQ---------------ATSAFQT---------QKPLKSTSLSLFY 648
Query: 748 CKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYG 805
K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG
Sbjct: 649 KKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYG 707
Query: 806 VAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIF 865
+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F
Sbjct: 708 ICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSVF 757
Query: 866 VPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT--- 922
+ +K +++ P +S P +P SP K S++
Sbjct: 758 MQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPLR 795
Query: 923 ---HNVYVSPLR 931
N+Y+SPL+
Sbjct: 796 IPGGNIYISPLK 807
>gi|291408942|ref|XP_002720769.1| PREDICTED: retinoblastoma 1 [Oryctolagus cuniculus]
Length = 927
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 171/673 (25%), Positives = 297/673 (44%), Gaps = 156/673 (23%)
Query: 285 NTLIADIL-KKKPCEASECKSENLEN----IDTDGLIYFENLMDDSSLSSSLNILEKDYD 339
+T I D+L K+ C E K+ +N +++ G++ F L + SLS K Y+
Sbjct: 269 DTRIIDMLCKEHDCNIDEVKNVYFKNFIPFMNSLGIVAFNGLPEVESLS-------KRYE 321
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
+LD R+F++ D++L + L + T K D + + PH
Sbjct: 322 EIYLKNKDLDARLFLDHDETL-QNDPLDSFELQRTPRKNNPDEEVNVI-------PPH-- 371
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
TPV T M T + L ++ +PS L + +C + +
Sbjct: 372 ------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKEN 413
Query: 460 VMRRAHIILEAIFP---SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+++R I IF + +G+ CV +I +++ +L ++LYYRV+E+M
Sbjct: 414 ILKRVKDI-GCIFKEKFAKAVGQGCV-----------DIGSQRYKL-GVRLYYRVMESML 460
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERT 567
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 461 KSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVL 520
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 521 NLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK---- 576
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR 687
+R G AD S A +N L H+ SP +RSPK+ +
Sbjct: 577 ---DREG-PADHFES----ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKSS--- 617
Query: 688 SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFF 747
R N T+ V+ + SAF + + T +++F+
Sbjct: 618 ---TTRVNSTANVETQ---------------ATSAFQT---------QKPVKSTSLSLFY 650
Query: 748 CKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYG 805
K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG
Sbjct: 651 KKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYG 709
Query: 806 VAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIF 865
+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F
Sbjct: 710 ICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSVF 759
Query: 866 VPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT--- 922
+ +K +++ P +S P +P SP K S++
Sbjct: 760 MQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPLR 797
Query: 923 ---HNVYVSPLRT 932
N+Y+SPL++
Sbjct: 798 IPGGNIYISPLKS 810
>gi|64446743|gb|AAY41438.1| retinoblastoma [Limanda limanda]
Length = 753
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 167/709 (23%), Positives = 300/709 (42%), Gaps = 139/709 (19%)
Query: 297 CEASECKSENLENI-DTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN 355
C+ +EC +E ++N+ T + E+L+ ++ L++ Y+ ++D R+F +
Sbjct: 111 CKENECNAEEVKNVYQTSFAAFLESLVFRFPDFPQVHDLDQQYEEHYLKTRDIDGRLFFD 170
Query: 356 EDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKM 415
D+++L + V +T K +LA + P
Sbjct: 171 RDETVL-VPKVEVSEVEMTPKK----NLADEDAVLIPP---------------------- 203
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
TP+ AMT+ + LR+ + +PS L + +C D T DV++R + + S
Sbjct: 204 -QTPIRAAMTSIQQLRSDLFSTGDQPSTNLYSYFNNCTVDPTQDVLKRLKTLDQEFSRSF 262
Query: 476 G--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
G +G RC+ + +QR + ++LYYRV+EAM +E + L +N + LL
Sbjct: 263 GQAVGPRCI------------VLGKQRFILGVQLYYRVMEAMLKSEEKRLSVQNFSKLLN 310
Query: 534 NERFHRCMLACSAELVLATH-----------------KTVTMLFPAVLERTGITAFDLSK 576
+ FH +LAC+ E+V+A + + FP +L+ + AFD K
Sbjct: 311 DSTFHTSLLACALEVVMAAYGESGFKAGGYNHGGGDSAGTDVCFPWILDVFNLAAFDFYK 370
Query: 577 VIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLL 636
VIESFI+ +L +E+ +HL + E ++E + W GS ++ L +AE +
Sbjct: 371 VIESFIKAYPTLSKEIVKHLETCENLIMERIAWRTGSPLFELLKQEHDSGAAE-----QV 425
Query: 637 ADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNF 696
P + + + LSPV H+ + P+ P T
Sbjct: 426 ETPASFNQPLQHNHTAADLYLSPVRPGHR----------VLPPESPGT------------ 463
Query: 697 TSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAV 756
+N+ Q++ +PT+P P +++F+ K+ +LA
Sbjct: 464 ----------VNS----------QASSHTPTQP-PAQIPRHPKSNSLSLFYKKLYRLAYT 502
Query: 757 RINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLT 815
R+ + L S ++ ++ LFQ L L +RH+DQ+++ Y + K+ ++L
Sbjct: 503 RLKILCSYLLSSHPELEPIMWTLFQHTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLR 562
Query: 816 FREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVE 875
F+ I+ Y+ P + F+ V + +E + II FYN++F+ +K +++
Sbjct: 563 FKTIVTAYKNLPNTNQETFKHVLI----------TEGHYDSIIIFYNQVFMQRLKTNILQ 612
Query: 876 LGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKM 935
A T T P P P+ S + L SP +V ++NVY+SPL+ +
Sbjct: 613 Y--ASTRPPTL----------SPIPQIPR-SPYKIL--NSPLRVPGSNNVYISPLKNPRN 657
Query: 936 DALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTLNF 983
I +GES S IN +N S+R + TL+
Sbjct: 658 SPSIMTPRSRMLVSIGESFGL----SSRFQKINQMVNSSDRSFKRTLDL 702
>gi|417405307|gb|JAA49369.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 932
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 159/658 (24%), Positives = 280/658 (42%), Gaps = 148/658 (22%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDD--SSLSSSLNILEKDYDNATRNKGELDERVFI 354
C+ +C + ++N+ I F N + S+ + L K Y+ +LD R+F+
Sbjct: 282 CKEHDCNVDEVKNVYFKNFIPFMNSLGTVASNGLPEVENLSKQYEEIYLKNKDLDARLFL 341
Query: 355 NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSK 414
+ D +L A P + +P RS+ +
Sbjct: 342 DHDKTLQ----------------------ADPTDSFEMQRTPRRSNPDEELNVI------ 373
Query: 415 MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAH---IILEAI 471
+ TPV T M T + L ++ +PS L + +C + +++R I +
Sbjct: 374 LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPVESILKRVKDIGYIFKEK 433
Query: 472 FPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
F + +G+ C+ GS QR ++LYYRV+E+M +E + L +N +
Sbjct: 434 F-AKAVGQGCIEIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSK 479
Query: 531 LLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESF 581
LL + FH +LAC+ E+V+AT+ T + FP +L + AFD KVIESF
Sbjct: 480 LLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESF 539
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMP 641
I+ E +L RE+ +HL E R++ES+ W S +++ + A+ +R G
Sbjct: 540 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK-------DREG------- 585
Query: 642 SLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVK 701
A H+ + P+ + H + IRSPK+ + R N T+ +
Sbjct: 586 ----SAEHLESACTLNLPLQ--NNHTAADMYLSPIRSPKKKGS------ATRVNSTANAE 633
Query: 702 DRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAM 761
+ SAF + + T +++F+ K+ +LA +R+N +
Sbjct: 634 AQ---------------ATSAFQT---------QKPLKSTSLSLFYKKVYRLAYLRLNTL 669
Query: 762 VERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREI 819
RL LS ++ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I
Sbjct: 670 CARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKII 728
Query: 820 IYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPA 879
+ Y++ P + F+ V + E+++ II FYN +F+ +K +++
Sbjct: 729 VTAYKELPHAVQETFKRVLI----------REEEYDSIIVFYNSVFMQRLKTNILQYAST 778
Query: 880 GTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLR 931
P +S P +P SP K S++ N+Y+SPL+
Sbjct: 779 ---------------------RPPTLSPIPHIP-RSPYKFSSSPLRIPGGNIYISPLK 814
>gi|431902377|gb|ELK08878.1| Retinoblastoma-associated protein [Pteropus alecto]
Length = 925
Score = 176 bits (446), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 165/671 (24%), Positives = 289/671 (43%), Gaps = 154/671 (22%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N ++ + L N L K Y+
Sbjct: 267 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVEN-LSKQYEEI 321
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L A P + +P +S+
Sbjct: 322 YFKNKDLDARLFLDHDKTLQ----------------------ADPTDSFEMQRTPQKSNP 359
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+ + TPV T M T + L ++ +PS L + +C + ++
Sbjct: 360 DEELSVI------LQQTPVRTVMNTIQQLMMILNSASDQPSDNLISYFNNCTVNPKESIL 413
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ C+ GS QR ++LYYRV+E+M
Sbjct: 414 KRVKDIGYIFKEKF-AKAVGQGCIEIGS-------------QRYKLGVRLYYRVMESMLK 459
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 460 SEEERLSIQNFSKLLNDNTFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVFN 519
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L R++ +HL E R++ES+ W S +++ + +
Sbjct: 520 LKAFDFYKVIESFIKAEANLTRDMIKHLERCEHRIMESLAWLSNSPLFDLIKQVK----- 574
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ T +N S L H+ SP +RSPK+ +
Sbjct: 575 --DREG----PADHLESACT-LNLS---LQNNHTAADMYLSP-----VRSPKKKGS---- 615
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 616 --TTRVNSTANAEAQ---------------ATSAFQT---------QKPLKSTSLSLFYK 649
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 650 KVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 708
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 709 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSVFM 758
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT---- 922
+K +++ P +S P +P SP K S++
Sbjct: 759 QRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPLRI 796
Query: 923 --HNVYVSPLR 931
N+Y+SPL+
Sbjct: 797 PGGNIYISPLK 807
>gi|426236719|ref|XP_004012315.1| PREDICTED: retinoblastoma-associated protein [Ovis aries]
Length = 960
Score = 176 bits (446), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 165/676 (24%), Positives = 291/676 (43%), Gaps = 160/676 (23%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYD 339
+ +T I ++L C+ EC + ++N+ I F N ++ + L N L K Y+
Sbjct: 300 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVEN-LSKQYE 354
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
+LD R+F++ D +L A P + +P +S
Sbjct: 355 EIYLKNKDLDARLFLDHDKTLQ----------------------ADPTDSFEMQRTPRKS 392
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
+ + + TPV T M T + L ++ +PS L + +C +
Sbjct: 393 NPDEEVNMI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKES 446
Query: 460 VMRRAHIILEAIFP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 515
+++R I + IF + +G+ C+ GS QR ++LYYRV+E+M
Sbjct: 447 ILKRVKDIGD-IFKEKFAKAVGQGCMEIGS-------------QRYKLGVRLYYRVMESM 492
Query: 516 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT---------VTMLFPAVLER 566
+E + L +N + LL + FH +LAC+ E+V+AT+ + FP +L
Sbjct: 493 LKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNV 552
Query: 567 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVL 626
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 553 FNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK--- 609
Query: 627 SAEINRLGLLA--DPMPSLD-AIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G + +P +L+ + + + LSPV S K ++P N S +
Sbjct: 610 ----DREGPVDHFEPACTLNLPLQNNHTAADMYLSPVRSPKKKASTPRANSTPNSEAQAT 665
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ +++ KPL T +
Sbjct: 666 SAFQT-----------------------QKPL-----------------------KSTSL 679
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C
Sbjct: 680 SLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 738
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 739 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFY 788
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +KTN + + + P P +S P +P SP K S+
Sbjct: 789 NSVFM--------------QRLKTNI---LQYASTRP----PTLSPIPHIPR-SPYKFSS 826
Query: 922 T------HNVYVSPLR 931
+ N+Y+SPL+
Sbjct: 827 SPLRIPGGNIYISPLK 842
>gi|297592141|gb|ADI46925.1| MAT3m [Volvox carteri f. nagariensis]
Length = 1113
Score = 176 bits (445), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 251/559 (44%), Gaps = 67/559 (11%)
Query: 107 CHILRVMK---LNIVDFFKELPQFLVKSGPILSNIYGAD--WENRLEAKELQANFVHLSI 161
C I R++ +N++DFF+E+ + K G+ + + + KE V + +
Sbjct: 95 CPISRIVAAAGINLLDFFREVHVVVSKLSAYFEARGGSSRIFTQQAQLKENSETVVVMGL 154
Query: 162 LSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVT 221
L+K YK + F D + R GW FL LRI S F D+V+
Sbjct: 155 LAKKYKDNFNLFLHQLDF-------------FKQVVLRLGWSAFLVLRIKLLSTFPDVVS 201
Query: 222 CTNGLVSILAILIIHVPVRFRNFNIH---DSSRFVKKSNKGVD-----LIASLCSIYDTS 273
C L + A+L H P R + H DS +K + ++A + S+
Sbjct: 202 CVELLPCVFAVLASHAP-RLPDCLSHLNQDSKLLLKALSDMCKADYSRVLARMSSVEPLL 260
Query: 274 EDDLRKIMEKTNTLIADILKKKPCEASE------CKSENLENIDTDGLIYFENLMDDSSL 327
L + + T + + + A E C + + N +GL+ D +
Sbjct: 261 SQILTAAVPEWRTALYNAKTRHEIAAEEETLKFGCAIDLVSNPVLEGLV-----TDAVRM 315
Query: 328 SSSLNILEKDYDNATRNKG-ELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFD----- 381
+L+ LE +Y+ + G ELDER F+ D + S S G + K +
Sbjct: 316 QRALDALESEYEKHYEHGGSELDEREFLFTDFTKFASPRFSPGHMQSAITKMRLGPMPLR 375
Query: 382 --SLASPVKTITSP--LSPHRSSASHPNGIAGGATSKMVV-----------TPVSTAMTT 426
+L P T+P +SP R + P ++ G S + V TPVS M
Sbjct: 376 QGALLGPGAHTTAPSSVSP-RLNFRVP--MSAGMHSPLPVLNLSIDTGQPSTPVSEVMNI 432
Query: 427 AKWLRTVICPLPSKPSAELERFLKSCD---KDVTTDVMRRAHIILEAI--FPSSGLGERC 481
+ WLR L ++PS L R+L + + T AH + + + SS + E
Sbjct: 433 SAWLRGRTANLAAEPSPGLTRYLAAVGGTRSEYVTGSASTAHQLGQRVRDLISSIIPEEK 492
Query: 482 VTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 541
+ + L+ +RRLE KLYY L+ + E +V +TSLL+ +FHR +
Sbjct: 493 IPSLVGAFPLLQPSLTAERRLEVTKLYYHSLDNILHTEEKVGGMAGVTSLLSAGKFHRAL 552
Query: 542 LACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEE 601
+AC E+V A ++ V+ FP VL+ I AFDL+K+I SF++ E+LPREL+RHL +EE
Sbjct: 553 VACCIEVVAACYRMVSCAFPKVLDALHIKAFDLAKMIPSFVKSIETLPRELKRHLFLIEE 612
Query: 602 RLLESMVWEKGSSMYNSLT 620
+++ES+ WE GSS+Y +
Sbjct: 613 KIIESLAWEPGSSLYTHIV 631
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 81/135 (60%), Gaps = 9/135 (6%)
Query: 747 FC-KINKLAAVRINAMVERLQLSQ----QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
FC K+ KLAA R+ M + S ++ VY + L +T LF+NRHIDQIIL
Sbjct: 774 FCRKVLKLAAFRLALMCDNFDFSPLDRVEVNAKVYETIEYALYNQTHLFYNRHIDQIILS 833
Query: 802 CFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
YG K+ +L ++FREII +YRKQPQ + +FRSV ++ ++ G DII F
Sbjct: 834 ALYGYCKVHKLVQVSFREIIGHYRKQPQAQQCIFRSVIIEQSN---PGLQVSTRADIIAF 890
Query: 861 YNKIFVPAVKPLLVE 875
YN++FVP++K L++
Sbjct: 891 YNQVFVPSMKSFLLK 905
>gi|194390566|dbj|BAG62042.1| unnamed protein product [Homo sapiens]
Length = 907
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 169/666 (25%), Positives = 294/666 (44%), Gaps = 142/666 (21%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 249 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYEEI 303
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 304 YLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH---- 351
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
TPV T M T + L ++ +PS L + +C + ++
Sbjct: 352 ----------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESIL 395
Query: 462 RRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 396 KRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLK 441
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTG 568
+E + L +N + LL + FH +LAC+ +V+AT+ T + FP +L
Sbjct: 442 SEEERLSIQNFSKLLNDNIFHMSLLACALGVVMATYSRSTSQNLDSGTDLSFPWILNVLN 501
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + ++
Sbjct: 502 LKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSK----- 556
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
+R G P L++ A +N L H+ SP +RSPK+ +
Sbjct: 557 --DREG----PTDHLES-ACPLNLP---LQNNHTAADMYLSP-----VRSPKKKGS---- 597
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFC 748
R N T+ + + SAF + + T +++F+
Sbjct: 598 --TTRVNSTANAETQ---------------ATSAFQT---------QKPLKSTSLSLFYK 631
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
K+ +LA +R+ + ERL LS+ ++ ++ LFQ L L +RH+DQI++C YG+
Sbjct: 632 KVYRLAYLRLITLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGI 690
Query: 807 AKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFV 866
K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +F+
Sbjct: 691 CKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSIIVFYNSVFM 740
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVY 926
+K +++ + + +S + H P SP FP+ SP ++ N+Y
Sbjct: 741 QRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPS----SPLRIPGG-NIY 784
Query: 927 VSPLRT 932
+SPL++
Sbjct: 785 ISPLKS 790
>gi|345788752|ref|XP_534118.3| PREDICTED: retinoblastoma-associated protein [Canis lupus
familiaris]
Length = 816
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 165/676 (24%), Positives = 292/676 (43%), Gaps = 164/676 (24%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ + +S + L +
Sbjct: 158 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGIVASNGLPEVESLSR 207
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ + D R+F++ D +L + D P + +P
Sbjct: 208 QYEEIYLKNKDFDARLFLDHDKTL------------------QID----PTDSFEMQRTP 245
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
+S++ + + TPV T M T + L ++ +PS L + +C +
Sbjct: 246 QKSNSDEEVNVI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 299
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVL 512
+++R I + F + +G+ C+ GS QR ++LYYRV+
Sbjct: 300 KESILKRVKDVGYIFKEKF-AKAVGQGCMEIGS-------------QRYKLGVRLYYRVM 345
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAV 563
E+M +E + L +N + LL ++ FH +LAC+ E+V+AT+ T + FP +
Sbjct: 346 ESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWI 405
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 406 LNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK 465
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+R G P L++ T +N P+ S H + +RSPK+
Sbjct: 466 -------DREG----PADHLESACT-LNL------PLQS--NHTAADMYLSPVRSPKKKG 505
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
+ R S V + +++ PL+S T +
Sbjct: 506 STIR--------VNSTVNTEAQATSAFQTQ---KPLKS-------------------TSL 535
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C
Sbjct: 536 SLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMC 594
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FY
Sbjct: 595 SMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFY 644
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +F+ +K +++ P +S P +P SP K S+
Sbjct: 645 NSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIPR-SPYKFSS 682
Query: 922 T------HNVYVSPLR 931
+ N+Y+SPL+
Sbjct: 683 SPLRIPGGNIYISPLK 698
>gi|350424134|ref|XP_003493699.1| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Bombus
impatiens]
Length = 1041
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 264/1097 (24%), Positives = 455/1097 (41%), Gaps = 223/1097 (20%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
D+T +R DLC+ L++D E K + + N E + W L
Sbjct: 9 DSTYSRHQDLCQK-LNMDATAASEAWKSYETIRQ----------NYTLEGDQLHWIGCAL 57
Query: 82 YLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
Y+ R S K G N++ N +L +L++ L ++ FF + KS ++
Sbjct: 58 YVACRKSSIPTVGKTGTNVE----GNCVSLTRLLQLCNLPLIQFFTK-----SKSWADMA 108
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSD-----ANGDKQSAAAST 190
N+ D+ +++E +L+ NF ++ K Y+ I+ + F P D + A T
Sbjct: 109 NM-SQDFRSKIE--KLEGNFAVSMVIFKKYQPIFTDIFKDPVDDISRPPRSRRHKAMPCT 165
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
+ + F W LF+ ++ F D+ ++ LV+ +L++ + + N + +
Sbjct: 166 PARVFE---FCWTLFICIK----GAFPDI---SDDLVNSYHLLLVCCDLIYSNALLANRK 215
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK----PCEASECKSEN 306
+ + G+ ++ +D I +T I +L ++ EA K
Sbjct: 216 DLLNPNFPGLP----------SNFNDENYIPPQTANCIVSLLCERHEAIAVEAKVIKEYY 265
Query: 307 LENIDTDGLIYFENLM--DDSSLSSSLNILEKD---------YDNATRNKGELDERVFIN 355
L+N ++ E ++ D ++ S L L D Y+ + G+ DER+F+
Sbjct: 266 LKNHINK--LFNERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFLA 323
Query: 356 E--DDSLLGSGSLSGGAVNITG----AKRKF-------DSLASPVKTIT----------- 391
+ L G SL +IT +KR F +++ SP + +
Sbjct: 324 DWRRVRLNGISSLEIVGEDITYHAKLSKRIFMKGHDASNNIGSPTQMMNVGDLHEQFQMK 383
Query: 392 -SPLSPHRSSASHPNGIAGGATSK----MVVTPVSTAMTTAKWLRTVICPLPSKPSAELE 446
S + P + G + + VTPVSTA + L+ ++ S PS L
Sbjct: 384 KEQYSGQIQHLAPPTPLTGRSYLRPKDITNVTPVSTATQSVIRLQAMLAGQTS-PSENLL 442
Query: 447 RFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI--WAEQRRLEA 504
+ L SC +DV T V + LGE + N D + + R
Sbjct: 443 QILNSCSQDVKTLVETKVK----------ELGELFCANYNKSTNANDTTSDFGKMRLYLG 492
Query: 505 LKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL 564
L+YR+LE + E + ++T+LLT E F +C+ AC E+V+ ++K+ +FP +L
Sbjct: 493 QTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEIVIYSYKSNDKIFPWIL 552
Query: 565 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL-TVAR 623
+ A+ KVIE +R E L R++ +HLN +EE++LES+ W+ S +++++ +
Sbjct: 553 NALSLDAYYFYKVIEIIVRAENQLSRDVVKHLNQIEEKILESLAWQSDSPLWSAIQSTPE 612
Query: 624 PVLSA-EINRLGLL--ADP----MPSLDAIA----THINFSSGGLSPVHSLHKHETSPGQ 672
V S E++ G+L DP P L IA TH + SP+ S + SP
Sbjct: 613 GVPSCEEVSLPGMLETVDPNIPGQPVLRRIALDRGTHHDVQQ---SPISSASERFQSPVA 669
Query: 673 NGDIRSPKRPCTDYR----SVLVERNNFTSPVK-------DRLLGLNNLKSKPLPPPLQS 721
+ + KR D R SVL P K R+L L + P +QS
Sbjct: 670 ASGV-AKKRLFPDTRIGGQSVLRVTGQSVLPSKVLTIDGNSRILLLPEQITVPRSSSVQS 728
Query: 722 AFA---------SPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QI 771
P +P G + +FF K LA+VR+ + L++ +
Sbjct: 729 TGTPMQTVAVNREPAKPKRTG--------SVALFFRKFYNLASVRMLDLCGSLEIMDIDL 780
Query: 772 RESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNL-TFREIIYNYRKQPQCK 830
++ ++ +F+ + +RT L +RH+DQI++C Y + K++++ +F EI+ YR QPQ +
Sbjct: 781 KKKIWTIFEYSIKERTELMKDRHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAE 840
Query: 831 PQVFRSVFVDWASARQ----------------------------SGRS----EQDHVDII 858
++RSV + + + +G S E+ D+I
Sbjct: 841 SHIYRSVLIAKTPSGELQKNNEEIGQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLI 900
Query: 859 TFYNKIFVPAVKPLLVELGPA-GTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPK 917
FYN ++VP VK + +LG A G+ M +S+ P LP P
Sbjct: 901 KFYNTVYVPQVKEVANKLGLARGSVM--------------------NLSLSP-LPKGKPP 939
Query: 918 KVSATHNVYVSPL-RTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNS--- 973
S V S + RT A+ + + C +SP+KDL IN + S
Sbjct: 940 ASSPVRRVTSSIMTRTLDPKAISASPAPQLSYCFS------RSPAKDLEAINKMMISVDP 993
Query: 974 NRRVRGTLNFDDVDVDV 990
R V L D+ DV++
Sbjct: 994 KRSVGKRLLTDETDVEM 1010
>gi|440803455|gb|ELR24357.1| Retinoblastomaassociated protein A domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1109
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 214/467 (45%), Gaps = 96/467 (20%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TP+ A++ WL++ + + PS L +F +C+ + ++ R + SGL
Sbjct: 513 TPMRAALSAVAWLKSTLEHTQAAPSPVLRKFFAACENNPAEEIEAR-------VAKYSGL 565
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLH----AKNLTSLLT 533
+ +QRR +KLYY++LEAM AE + L + + ++LL
Sbjct: 566 -----------VPFGEGEEGQQRRELGIKLYYKILEAMLLAEEERLKRASVSSDFSTLLR 614
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
++ FHR +LAC E++ +K + + FP +L I AFD K+IES IR+E +LP +
Sbjct: 615 HDSFHRSLLACCFEVIAYCYKIIDLAFPKLLSLFHIHAFDFFKLIESVIRYERTLPVGVT 674
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
RHL +EE +LES+ W++GS ++ LLADP D +A +
Sbjct: 675 RHLGHIEETILESVGWQEGSPVF-----------------ALLADPAKVRDLLALFRRPT 717
Query: 654 SGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK 713
GG + SP P N SP
Sbjct: 718 QGGAKEFMA-----------SSALSPPSPAP---------NMLVSP-------------- 743
Query: 714 PLPPPLQSAFASPTRP-NPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIR 772
A PT P PG GG + + +F+ K+ A+ R ++ + L ++
Sbjct: 744 ----------ARPTAPATPGRGGMGGSWHSLCLFYRKVLGQASRRCWSLCAAIGLRPEVF 793
Query: 773 ESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKP 831
+ V+ ++L + RH+DQIILC YGV++++++ ++ FR I+ +YRKQP KP
Sbjct: 794 DQVWRATIELLISHANFIKGRHLDQIILCVIYGVSRVNKVKDVAFRGILEHYRKQPHRKP 853
Query: 832 --QVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVEL 876
+V+R+V ++ + DII FYN +F+P ++ L++
Sbjct: 854 AAEVYRAVPLN---------EPGEKGDIIKFYNFVFIPQLESFLLQF 891
>gi|126327520|ref|XP_001368799.1| PREDICTED: retinoblastoma-associated protein [Monodelphis
domestica]
Length = 928
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 165/673 (24%), Positives = 289/673 (42%), Gaps = 151/673 (22%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI--LEKDYDN 340
+T+T + ++L C+ EC + ++N+ + F + S+ + + L + Y+
Sbjct: 267 ETDTRVIEVL----CKEHECNIDEVKNVYLKNFLPFLKSLGISASNGLPEVENLSRQYEE 322
Query: 341 ATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSS 400
++D R+F++ D +L + S+ V T K D PL P +
Sbjct: 323 IYLKNKDMDARLFLDHDKTL-QADSIYSFEVERTPRKNHPDE--------EMPLIPPQ-- 371
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
TPV M T + L ++ +PS L + +C + +
Sbjct: 372 -----------------TPVRAVMNTIQQLVMILNSASDQPSENLNSYFNNCTVNPKESI 414
Query: 461 MRRAHIILEAIFP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
++R I IF + +G+ C GS QR ++LYYRV+E+M
Sbjct: 415 LKRVENI-GRIFKEKFAEAVGQGCAEIGS-------------QRYKLGVRLYYRVMESML 460
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLERT 567
+E + L N + LL ++ FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 461 KSEEERLSIHNFSKLLNDKIFHTSLLACAVEVVMATYGRNTYQSHDSGTDLSFPWILNVL 520
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ AFD KVIESFI+ E SL RE+ +HL E R++ES+ W+ S +++ + ++
Sbjct: 521 DLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK---- 576
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR 687
+ L +P +L+ P+ H H + +RSPK+ +
Sbjct: 577 EREGSVDHLLEPTSTLNM-------------PLQ--HNHTAADLYLSPVRSPKKKGS--- 618
Query: 688 SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFF 747
R N TS + Q+ AS T+ P T +++F+
Sbjct: 619 ---TARINSTSSAEP-----------------QTTPASQTQKAPKS-------TSLSLFY 651
Query: 748 CKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYG 805
K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C YG
Sbjct: 652 KKVYRLAYLRLNTLCSRL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYG 710
Query: 806 VAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIF 865
+ K+ ++L F+ I+ Y+ + F+ V + E + II FYN +F
Sbjct: 711 ICKVKNIDLKFKIIVTAYKDLTHAIQETFKRVLI----------REGQYDSIIVFYNLVF 760
Query: 866 VPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT--- 922
+ +K +++ +NR P +S P +P SP K S++
Sbjct: 761 MQKLKTNILQYA-------SNR--------------PPTLSPIPHIP-RSPYKFSSSPLR 798
Query: 923 ---HNVYVSPLRT 932
N+Y+SPL++
Sbjct: 799 VPGGNIYISPLKS 811
>gi|440898457|gb|ELR49952.1| Retinoblastoma-associated protein, partial [Bos grunniens mutus]
Length = 883
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 160/673 (23%), Positives = 284/673 (42%), Gaps = 158/673 (23%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYDNA 341
+T I ++L C+ EC + ++N+ I F N ++ + L N L K Y+
Sbjct: 225 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVEN-LSKQYEEI 279
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L A P + +P +S+
Sbjct: 280 YLKNKDLDARLFLDHDKTLQ----------------------ADPTDSFEMQRTPRKSNP 317
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+ + TPV T M T + L ++ +PS L + +C + ++
Sbjct: 318 DEEVNMI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKDSIL 371
Query: 462 RRAHIILEAIFP--SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
+R I + + +G+ C+ GS QR ++LYYRV+E+M +
Sbjct: 372 KRVKDIGDVFKEKFAKAVGQGCMEIGS-------------QRYKLGVRLYYRVMESMLKS 418
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT---------VTMLFPAVLERTGI 569
E + L +N + LL + FH +LAC+ E+V+AT+ + FP +L +
Sbjct: 419 EEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNL 478
Query: 570 TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 479 KAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK------ 532
Query: 630 INRLGLLA--DPMPSLD-AIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDY 686
+R G + +P +L+ + + + LSPV S K +P N S + + +
Sbjct: 533 -DREGPVDHFEPACTLNLPLQNNHTAADMYLSPVRSPKKKGPTPRVNSTPNSEAQATSAF 591
Query: 687 RSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIF 746
++ KPL T +++F
Sbjct: 592 QT-----------------------QKPL-----------------------KSTSLSLF 605
Query: 747 FCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFY 804
+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C Y
Sbjct: 606 YKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMY 664
Query: 805 GVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKI 864
G+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN +
Sbjct: 665 GICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSV 714
Query: 865 FVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT-- 922
F+ +K +++ P +S P +P SP K S++
Sbjct: 715 FMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSPL 752
Query: 923 ----HNVYVSPLR 931
N+Y+SPL+
Sbjct: 753 RIPGGNIYISPLK 765
>gi|340722763|ref|XP_003399771.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Bombus
terrestris]
Length = 1041
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 261/1097 (23%), Positives = 454/1097 (41%), Gaps = 223/1097 (20%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
D+T +R DLC+ L++D E K + + N E + W L
Sbjct: 9 DSTYSRHQDLCQK-LNMDATAASEAWKSYETIRQ----------NYTLEGDQLHWIGCAL 57
Query: 82 YLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
Y+ R S K G N++ N +L +L++ L ++ FF + KS ++
Sbjct: 58 YVACRKSSIPTVGKTGTNVE----GNCVSLTRLLQLCNLPLIQFFTK-----SKSWADMA 108
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSD-----ANGDKQSAAAST 190
N+ D+ +++E +L+ NF ++ K Y+ I+ + F P D + A T
Sbjct: 109 NM-SQDFRSKIE--KLEGNFAVSMVIFKKYQPIFTDIFKDPVDDISRPPRSRRHKAMPCT 165
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
+ + F W LF+ ++ F D+ ++ LV+ +L++ + + N + +
Sbjct: 166 PARVFE---FCWTLFICIK----GAFPDI---SDDLVNSYHLLLVCCDLIYSNALLANRK 215
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK----PCEASECKSEN 306
+ + G+ ++ +D +T I +L ++ EA K
Sbjct: 216 DLLNPNFPGLP----------SNFNDENYTPPQTANCIVSLLCERHEAIAVEAKVIKEYY 265
Query: 307 LENIDTDGLIYFENLM--DDSSLSSSLNILEKD---------YDNATRNKGELDERVFIN 355
L+N ++ E ++ D ++ S L L D Y+ + G+ DER+F+
Sbjct: 266 LKNHINK--LFNERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFLA 323
Query: 356 EDDSL----LGSGSLSGG--AVNITGAKRKF-------DSLASPVKTIT----------- 391
+ + + S + GG A + +KR F +++ SP + +
Sbjct: 324 DWRRVKLNGISSLEIVGGDIAYHAKLSKRIFMRGHDASNNIGSPTQMMNVGDLHEQFQMK 383
Query: 392 -SPLSPHRSSASHPNGIAGGATSK----MVVTPVSTAMTTAKWLRTVICPLPSKPSAELE 446
S + P + G + + VTPVSTA + L+ ++ S PS L
Sbjct: 384 KEQYSGQIQHLAPPTPLTGRSYLRPKDITNVTPVSTATQSVIRLQAMLAGQTS-PSENLL 442
Query: 447 RFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI--WAEQRRLEA 504
+ L SC +DV T V + LGE + N D + + R
Sbjct: 443 QILNSCSQDVKTLVETKVK----------ELGELFCANYNKSTNANDTTSDFGKMRLYLG 492
Query: 505 LKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL 564
L+YR+LE + E + ++T+LLT E F +C+ AC E+V+ ++K+ +FP +L
Sbjct: 493 QTLFYRLLEMILNDEKRKKPNYDVTNLLTKEIFIQCLFACCLEIVIYSYKSNDKIFPWIL 552
Query: 565 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL-TVAR 623
+ A+ KVIE +R E L R++ +HLN +EE++LES+ W+ S ++ ++ +
Sbjct: 553 NALSLDAYYFYKVIEIIVRAENQLSRDVVKHLNQIEEKILESLAWQSDSPLWGAIQSTPE 612
Query: 624 PVLSA-EINRLGLL--ADP----MPSLDAIA----THINFSSGGLSPVHSLHKHETSPGQ 672
V S E++ G+L DP P L IA TH + SP+ S + SP
Sbjct: 613 GVPSCEEVSLPGMLETVDPNIPGQPVLRRIALDRGTHHDVQQ---SPISSASERFQSPVA 669
Query: 673 NGDIRSPKRPCTDYR----SVLVERNNFTSPVK-------DRLLGLNNLKSKPLPPPLQS 721
+ + KR D R SVL P K R+L L + P +QS
Sbjct: 670 ASGV-AKKRLFPDTRIGGQSVLRVTGQSVLPSKVLTIDGNSRILLLPEQITVPRSSSVQS 728
Query: 722 AFA---------SPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QI 771
P +P G + +FF K LA+VR+ + L++ +
Sbjct: 729 TGTPMQTVAVNREPAKPKRTG--------SVALFFRKFYNLASVRMLDLCGSLEIMDIDL 780
Query: 772 RESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNL-TFREIIYNYRKQPQCK 830
++ ++ +F+ + +RT L +RH+DQI++C Y + K++++ +F EI+ YR QPQ +
Sbjct: 781 KKKIWTIFEYSIKERTELMKDRHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQAE 840
Query: 831 PQVFRSVFVDWASARQ----------------------------SGRS----EQDHVDII 858
++RSV + + + +G S E+ D+I
Sbjct: 841 SHIYRSVLIAKTPSGELQKNNEEIGQKDVSDKETNAAPPTPTNMAGTSQNFGEETRGDLI 900
Query: 859 TFYNKIFVPAVKPLLVELGPA-GTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPK 917
FYN ++VP VK + +LG A G+ M +S+ P LP P
Sbjct: 901 KFYNTVYVPQVKEVANKLGLARGSVM--------------------NLSLSP-LPKGKPP 939
Query: 918 KVSATHNVYVSPL-RTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNS--- 973
S V S + RT A+ + + C +SP+KDL IN + S
Sbjct: 940 ASSPVRRVTSSIMTRTLDPKAISASPAPQLSYCFS------RSPAKDLEAINKMMISVDP 993
Query: 974 NRRVRGTLNFDDVDVDV 990
R V L D+ DV++
Sbjct: 994 KRSVGKRLLTDETDVEM 1010
>gi|148703912|gb|EDL35859.1| retinoblastoma 1 [Mus musculus]
Length = 881
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 165/681 (24%), Positives = 282/681 (41%), Gaps = 173/681 (25%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNAT 342
+T I ++L C+ EC + ++N+ I F N + S + + L K Y+
Sbjct: 224 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEEVY 279
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
+LD R+F++ D +L P+ + + +P ++
Sbjct: 280 LKNKDLDARLFLDHDKTLQ----------------------TDPIDSFETERTPRKN--- 314
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+P+ A T TPV T M T + L ++ +PS L + +C + ++++
Sbjct: 315 NPDEEANVVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILK 371
Query: 463 R----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
R HI E ++ +G+ CV +Q L ++LYYRV+E+M +
Sbjct: 372 RVKDVGHIFKEKF--ANAVGQGCVDIGVQRYKL------------GVRLYYRVMESMLKS 417
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML---------FPAVLERTGI 569
E + L +N + LL + FH +LAC+ E+V+AT+ T+ FP +L +
Sbjct: 418 EEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNL 477
Query: 570 TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 478 KAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMES----------------------- 514
Query: 630 INRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSV 689
L L+D SP+ L K ++ G+ D P P +
Sbjct: 515 ---LAWLSD-------------------SPLFDLIK-QSKDGEGPDNLEPACPLS----- 546
Query: 690 LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA---------- 739
L + N T+ ++ PL P + S TR N ET A
Sbjct: 547 LPLQGNHTAA---------DMYLSPLRSPKKRT--STTRVNSAANTETQAASAFHTQKPL 595
Query: 740 -ETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQ 797
T + +F+ K+ +LA +R+N + RL ++ ++ LFQ L L +RH+DQ
Sbjct: 596 KSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQ 655
Query: 798 IILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI 857
I++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E++ I
Sbjct: 656 IMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSI 705
Query: 858 ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPK 917
I FYN +F+ +K +++ P +S P +P SP
Sbjct: 706 IVFYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPY 743
Query: 918 KVSAT------HNVYVSPLRT 932
K S++ N+Y+SPL++
Sbjct: 744 KFSSSPLRIPGGNIYISPLKS 764
>gi|188528630|ref|NP_033055.2| retinoblastoma-associated protein [Mus musculus]
gi|341941878|sp|P13405.2|RB_MOUSE RecName: Full=Retinoblastoma-associated protein; AltName: Full=pRb;
Short=Rb; AltName: Full=pp105
gi|66396541|gb|AAH96525.1| Retinoblastoma 1 [Mus musculus]
gi|89357181|gb|ABD72475.1| retinoblastoma susceptibility protein [Mus musculus]
Length = 921
Score = 173 bits (438), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 165/681 (24%), Positives = 282/681 (41%), Gaps = 173/681 (25%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNAT 342
+T I ++L C+ EC + ++N+ I F N + S + + L K Y+
Sbjct: 264 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEEVY 319
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
+LD R+F++ D +L P+ + + +P ++
Sbjct: 320 LKNKDLDARLFLDHDKTLQ----------------------TDPIDSFETERTPRKN--- 354
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+P+ A T TPV T M T + L ++ +PS L + +C + ++++
Sbjct: 355 NPDEEANVVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILK 411
Query: 463 R----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
R HI E ++ +G+ CV +Q L ++LYYRV+E+M +
Sbjct: 412 RVKDVGHIFKEKF--ANAVGQGCVDIGVQRYKL------------GVRLYYRVMESMLKS 457
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML---------FPAVLERTGI 569
E + L +N + LL + FH +LAC+ E+V+AT+ T+ FP +L +
Sbjct: 458 EEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNL 517
Query: 570 TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 518 KAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMES----------------------- 554
Query: 630 INRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSV 689
L L+D SP+ L K ++ G+ D P P +
Sbjct: 555 ---LAWLSD-------------------SPLFDLIK-QSKDGEGPDNLEPACPLS----- 586
Query: 690 LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA---------- 739
L + N T+ ++ PL P + S TR N ET A
Sbjct: 587 LPLQGNHTAA---------DMYLSPLRSPKKRT--STTRVNSAANTETQAASAFHTQKPL 635
Query: 740 -ETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQ 797
T + +F+ K+ +LA +R+N + RL ++ ++ LFQ L L +RH+DQ
Sbjct: 636 KSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQ 695
Query: 798 IILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI 857
I++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E++ I
Sbjct: 696 IMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSI 745
Query: 858 ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPK 917
I FYN +F+ +K +++ P +S P +P SP
Sbjct: 746 IVFYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPY 783
Query: 918 KVSAT------HNVYVSPLRT 932
K S++ N+Y+SPL++
Sbjct: 784 KFSSSPLRIPGGNIYISPLKS 804
>gi|296481832|tpg|DAA23947.1| TPA: retinoblastoma 1 [Bos taurus]
Length = 928
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 160/674 (23%), Positives = 284/674 (42%), Gaps = 158/674 (23%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYD 339
+ +T I ++L C+ EC + ++N+ I F N ++ + L N L K Y+
Sbjct: 268 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVEN-LSKQYE 322
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
+LD R+F++ D +L A P + +P +S
Sbjct: 323 EIYLKNKDLDARLFLDHDKTLQ----------------------ADPTDSFEMQRTPRKS 360
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
+ + + TPV T M T + L ++ +PS L + +C +
Sbjct: 361 NPDEEVNMI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKDS 414
Query: 460 VMRRAHIILEAIFP--SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+++R I + + +G+ C+ GS QR ++LYYRV+E+M
Sbjct: 415 ILKRVKDIGDVFKEKFAKAVGQGCMEIGS-------------QRYKLGVRLYYRVMESML 461
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT---------VTMLFPAVLERT 567
+E + L +N + LL + FH +LAC+ E+V+AT+ + FP +L
Sbjct: 462 KSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVF 521
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 522 NLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK---- 577
Query: 628 AEINRLGLLA--DPMPSLD-AIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCT 684
+R G + +P +L+ + + + LSPV S K +P N S + +
Sbjct: 578 ---DREGPVDHFEPACTLNLPLQNNHTAADMYLSPVRSPKKKGPTPRVNSTPNSEAQATS 634
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGIN 744
+++ KPL T ++
Sbjct: 635 AFQT-----------------------QKPL-----------------------KSTSLS 648
Query: 745 IFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI++C
Sbjct: 649 LFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCS 707
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYN 862
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN
Sbjct: 708 MYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYN 757
Query: 863 KIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT 922
+F+ +K +++ P +S P +P SP K S++
Sbjct: 758 SVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSS 795
Query: 923 ------HNVYVSPL 930
N+Y+SPL
Sbjct: 796 PLRIPGGNIYISPL 809
>gi|200453|gb|AAA39964.1| pp105 Rb protein [Mus musculus]
Length = 921
Score = 172 bits (437), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 165/681 (24%), Positives = 282/681 (41%), Gaps = 173/681 (25%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNAT 342
+T I ++L C+ EC + ++N+ I F N + S + + L K Y+
Sbjct: 264 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEEVY 319
Query: 343 RNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSAS 402
+LD R+F++ D +L P+ + + +P ++
Sbjct: 320 LKNKDLDARLFLDHDKTLQ----------------------TDPIDSFETERTPRKN--- 354
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
+P+ A T TPV T M T + L ++ +PS L + +C + ++++
Sbjct: 355 NPDEEANVVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILK 411
Query: 463 R----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
R HI E ++ +G+ CV +Q L ++LYYRV+E+M +
Sbjct: 412 RVKDVGHIFKEKF--ANAVGQGCVDIGVQRYKL------------GVRLYYRVMESMLKS 457
Query: 519 EAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML---------FPAVLERTGI 569
E + L +N + LL + FH +LAC+ E+V+AT+ T+ FP +L +
Sbjct: 458 EEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNL 517
Query: 570 TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAE 629
AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 518 KAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMES----------------------- 554
Query: 630 INRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSV 689
L L+D SP+ L K ++ G+ D P P +
Sbjct: 555 ---LAWLSD-------------------SPLFDLIK-QSKDGEGPDNLEPACPLS----- 586
Query: 690 LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA---------- 739
L + N T+ ++ PL P + S TR N ET A
Sbjct: 587 LPLQGNHTAA---------DMYLSPLRSPKKRT--STTRVNSAANTETQAASAFHTQKPL 635
Query: 740 -ETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQ 797
T + +F+ K+ +LA +R+N + RL ++ ++ LFQ L L +RH+DQ
Sbjct: 636 KSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQ 695
Query: 798 IILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI 857
I++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E++ I
Sbjct: 696 IMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSI 745
Query: 858 ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPK 917
I FYN +F+ +K +++ P +S P +P SP
Sbjct: 746 IVFYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPY 783
Query: 918 KVSAT------HNVYVSPLRT 932
K S++ N+Y+SPL++
Sbjct: 784 KFSSSPLRIPGGNIYISPLKS 804
>gi|307194380|gb|EFN76703.1| Retinoblastoma-like protein 1 [Harpegnathos saltator]
Length = 1025
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 254/1058 (24%), Positives = 433/1058 (40%), Gaps = 237/1058 (22%)
Query: 76 WFAFVLYLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVK 130
W LY+ R S + G N++ N +L +L++ L +++FF++ K
Sbjct: 32 WIGCALYVACRKSSIPTVGRTGANVE----GNYVSLTRLLQLCNLPLIEFFRK-----SK 82
Query: 131 SGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGD-------- 182
S ++N+ + R++ ++L+ NF ++ K Y+ I+ + F D D
Sbjct: 83 SWADMANM---PQDFRIKIEKLEGNFSVSMVIFKKYQPIFTDIF--KDPREDVSRPPRSR 137
Query: 183 KQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKD---------LVTC----TNGLVSI 229
+ A T + F W LF+ ++ A D LV C +N LV+
Sbjct: 138 RHKAVPCTPARV---FEFCWTLFIYIK-GAIPDISDDLVNSYHLLLVCCDLIYSNALVAN 193
Query: 230 LAILI-IHVPVRFRNFNIHDSSRFVKKSNKGVDLIASL-CSIYDTSEDDLRKIMEKTNTL 287
L+ + P NFN D S + D I SL C +D
Sbjct: 194 RKDLLNPNFPGLPENFNDEDYS-----PPQTADCIVSLLCERHDAI-------------- 234
Query: 288 IADILKKKPCEASECKSENLENIDTDGLIYFENLM--DDSSLSSSLNILEKDYDNATRNK 345
P EA K ++N ++ E L+ D S+ S L L D ++ NK
Sbjct: 235 --------PVEAKVIKEYCMKNYINK--LFNERLLRGDQSNFSGILEALNFDGNSKAINK 284
Query: 346 ---------GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV--------K 388
G+ DER+F+ E + S G AK D A V +
Sbjct: 285 AYEQRVLSVGDFDERIFLAEWRRIRLKSISSSGVFGQNVAKH--DQFAKHVILQGHDASE 342
Query: 389 TITSPLSPHRSSASH-------------------PNGIAG-----GATSKMVVTPVSTAM 424
I SP H P + G ++TPVSTA
Sbjct: 343 NIGSPTQMMNIDDFHEQLQMKKEQHTGQIQYLAPPTPLTGRRYLRSKDMSNIITPVSTAT 402
Query: 425 TTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTG 484
+ L+ +I S PS L + L +C +DV + V + + E + T
Sbjct: 403 QSVIKLQALIAG-QSAPSEGLLQMLNNCSQDVKSLVETKVKQLGELFCANYNSNVNATTN 461
Query: 485 SLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLAC 544
++ + ++R L L+Y++LE + E + ++T+LL+NE F +C+ AC
Sbjct: 462 DSSRSD-----FGKKRLLMGQTLFYKLLEMILNDEKRKKPNYDVTNLLSNELFIQCLFAC 516
Query: 545 SAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLL 604
E+V+ ++K+ +FP +L + A+ KVIE +R E+ L RE+ +HLN +EE++L
Sbjct: 517 CLEIVIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRTEDQLSREVVKHLNQIEEKIL 576
Query: 605 ESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLL--ADP----MPSLDAIA----THINF 652
ES+ W+ S ++ ++ ++A V S E++ G L DP P L IA TH +
Sbjct: 577 ESLAWQSDSPLWQTIESLADGVPSCEEVSLPGTLEAVDPNTPGQPVLRRIALDRGTHHDV 636
Query: 653 SSGGLSPVHSLHKHETSP-GQNGDIRSPKRPCTDYRS----------------VLVERNN 695
SP+ S + SP +G ++ KR D R+ V+++ N
Sbjct: 637 QQ---SPISSASERFQSPIAASGIVK--KRLFPDNRATGQSVLRVGQSVLSSKVVIDSNQ 691
Query: 696 FTSPVKDRLLGLNNLKSKPLPPPLQSAFAS---PTRPNPGGGGETCAETGINIFFCKINK 752
V D++ ++ L +Q+ A+ +P G + +FF K
Sbjct: 692 RILFVPDQITVSKASVTQGLSSGVQAVQAANRDAAKPKRTG--------SVALFFRKFYN 743
Query: 753 LAAVRINAMVERLQLS-QQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ 811
LA VR+ + L++S ++ ++ ++ +F+ + +RT L +RH+DQI++C Y + K+ +
Sbjct: 744 LACVRMQDLCNSLEISEEEDKKKIWTIFEYSIKERTELMKDRHLDQILMCAIYVICKLVK 803
Query: 812 LNL-TFREIIYNYRKQPQCKPQVFRSVFVDWASARQS----------------------- 847
+ +F EI+ YR QPQ + ++RSV ++ S ++
Sbjct: 804 MEKNSFTEIMRCYRLQPQAESHIYRSVLIEKISVNEAKILASGNEKSEGNGTIADKNATP 863
Query: 848 -------GRSE----QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNND 896
G S+ + D+I FYN ++VP VK G ++R S +N
Sbjct: 864 PTPTNMIGTSQNFDGETRGDLIKFYNTVYVPEVKEFANRFG-------SSRGSVMN---- 912
Query: 897 GPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL-RTSKMDALISHSSKSYYACVGESTH 955
+S+ P LP P S V S + RT A+ + + C
Sbjct: 913 --------LSLSP-LPKGKPPASSPVRRVTSSIMTRTLDPKAISASPAPQLSYCFS---- 959
Query: 956 AYQSPSKDLTDINHRL---NSNRRVRGTLNFDDVDVDV 990
+SP+KDL IN + ++ + V L DD DV++
Sbjct: 960 --RSPAKDLEAINKMMISVDARKGVGKRLLSDDTDVEM 995
>gi|405951748|gb|EKC19634.1| Retinoblastoma-associated protein [Crassostrea gigas]
Length = 859
Score = 172 bits (436), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 187/818 (22%), Positives = 334/818 (40%), Gaps = 197/818 (24%)
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLF 205
R K+L+ ++ +S L +++R + T ++D + W+LF
Sbjct: 92 RFHLKQLEKDYCVVSALYHTHER-------------ETDGIPLQTLSCVNDKKQLCWVLF 138
Query: 206 LALR------IHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKG 259
L + F LV C ++ ++ P +D + + S K
Sbjct: 139 LLAKERLLTDCQIVEAFYILVCCYEFVLRTTPGFQLNTP--------YDDVQVSEDSEKH 190
Query: 260 VDL-IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYF 318
L + +LC +D S +++ + + + +PC F
Sbjct: 191 SGLMLKTLCEQFDLSYEEVSLVQKN---------RVEPC--------------------F 221
Query: 319 ENLMD-DSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAK 377
+ L + D SL L L + Y+ R KG+L+E +F+ D L
Sbjct: 222 QKLFNGDKSLE--LTALTEQYEKDYRQKGDLNELLFLRNDPHL----------------- 262
Query: 378 RKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPL 437
PL + + +S N G +TPV A+ T + L+ ++
Sbjct: 263 --------------QPLEQNGNLSSPRNDEPDGPP----ITPVRAALNTIQNLKKILFST 304
Query: 438 PSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWA 497
+PS +L K+C ++ + + R LE +F ++ E+ T Q A A
Sbjct: 305 RDEPSPDLLVHFKNCSQNPLSSIKERLGR-LETVF-TNTFAEQ--TDRNQTA------IA 354
Query: 498 EQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHK--- 554
+QR + A +LYYRV+E+M E + L + + LL + FH +LACS E+V+ T+
Sbjct: 355 KQRFVLAKRLYYRVMESMLNHERERLSQTDFSKLLNIDTFHVSLLACSLEIVMMTYGASW 414
Query: 555 -----TV-----TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLL 604
TV FP +++ G+ +D KV+ESFI+ E L +E+ +HL +LE+R+L
Sbjct: 415 NASFGTVCAGDSKFSFPWIIQTFGLHCYDFFKVLESFIKAEPILTKEIVKHLQNLEKRIL 474
Query: 605 ESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLH 664
E + W S ++ +L+ +E + L P P + A + + LSP+ +
Sbjct: 475 EELAWTPESPVFEALS------KSEAQAVQLDPPPFPPVQATLSSADMY---LSPMRVVV 525
Query: 665 KHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFA 724
K ++S +G +SP++ + + LP P +S
Sbjct: 526 KSKSSSSLSG--QSPQKTASTF------------------------SGHELPSPDKST-- 557
Query: 725 SPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILN 784
G ++ A IF K+ +L R+ + L L + I++ ++ + +
Sbjct: 558 -------GKKSQSLA-----IFLNKVCRLGYHRLEQLFSLLFLPKDIQQRIWTCLEYCVT 605
Query: 785 QRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA 844
+RT L NRH+DQI+LC YG+ K+ + + F++II Y + PQ P V+R ++
Sbjct: 606 KRTGLLKNRHLDQIMLCSVYGICKVMEREIKFKDIIRTYSELPQASPNVYRRALIEGC-- 663
Query: 845 RQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPK 904
++ II FYN++F+ +K +++ P SP
Sbjct: 664 --------EYDSIIVFYNRVFMHNMKNFILQFAPTRQ--------------------SPT 695
Query: 905 VSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHS 942
+S P +++ N YVSPL+ S +S S
Sbjct: 696 LSPAPRNITSPVYSIASRRNFYVSPLKDSPFKPPLSPS 733
>gi|116004031|ref|NP_001070375.1| retinoblastoma-associated protein [Bos taurus]
gi|115304733|gb|AAI23389.1| Retinoblastoma 1 [Bos taurus]
Length = 928
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 158/673 (23%), Positives = 282/673 (41%), Gaps = 156/673 (23%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYD 339
+ +T I ++L C+ EC + ++N+ I F N ++ + L N L K Y+
Sbjct: 268 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGIVASNGLPEVEN-LSKQYE 322
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
+LD R+F++ D +L A P + +P +S
Sbjct: 323 EIYLKNKDLDARLFLDHDKTLQ----------------------ADPTDSFEMQRTPRKS 360
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
+ + + TPV T M T + L ++ +PS L + +C +
Sbjct: 361 NPDEEVNMI------LPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKDS 414
Query: 460 VMRRAHIILEAIFP--SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+++R I + + +G+ C+ GS QR ++LYYRV+E+M
Sbjct: 415 ILKRVKDIGDVFKEKFAKAVGQGCMEIGS-------------QRYKLGVRLYYRVMESML 461
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT---------VTMLFPAVLERT 567
+E + L +N + LL + FH +LAC+ E+V+AT+ + FP +L
Sbjct: 462 KSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSMSQSLDTGTDLSFPWILNVF 521
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+
Sbjct: 522 NLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK---- 577
Query: 628 AEINRLGLLA--DPMPSLD-AIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCT 684
+R G + +P +L+ + + + LSPV S K +P N S + +
Sbjct: 578 ---DREGPVDHFEPACTLNLPLQNNHTAADMYLSPVRSPKKKGPTPRVNSTPNSEAQATS 634
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGIN 744
+++ KPL T ++
Sbjct: 635 AFQT-----------------------QKPL-----------------------KSTSLS 648
Query: 745 IFFCKINKLAAVRINAMVER-LQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
+F+ K+ +LA +R+N + R L ++ ++ LFQ L L +RH+DQI++C
Sbjct: 649 LFYKKVYRLAYLRLNTLCARFLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSM 708
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II FYN
Sbjct: 709 YGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNS 758
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT- 922
+F+ +K +++ P +S P +P SP K S++
Sbjct: 759 VFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKFSSSP 796
Query: 923 -----HNVYVSPL 930
N+Y+SPL
Sbjct: 797 LRIPGGNIYISPL 809
>gi|74187799|dbj|BAE24548.1| unnamed protein product [Mus musculus]
Length = 921
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 167/682 (24%), Positives = 284/682 (41%), Gaps = 175/682 (25%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILE---KDYDNA 341
+T I ++L C+ EC + ++N+ I F N + S S+ L +E K Y+
Sbjct: 264 DTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVS-SNGLPEVESFSKRYEEV 318
Query: 342 TRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA 401
+LD R+F++ D +L P+ + + +P ++
Sbjct: 319 YLKNKDLDARLFLDHDKTLQ----------------------TDPIDSFETERTPRKN-- 354
Query: 402 SHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVM 461
+P+ A T TPV T M T + L ++ +PS L + +C + +++
Sbjct: 355 -NPDEEANVVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENIL 410
Query: 462 RR----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+R HI E ++ +G+ CV +Q L ++LYYRV+E+M
Sbjct: 411 KRVKDVGHIFKEKF--ANAVGQGCVDIGVQRYKL------------GVRLYYRVMESMLK 456
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML---------FPAVLERTG 568
+E + L +N + LL + FH +LAC+ E+V+AT+ T+ FP +L
Sbjct: 457 SEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLN 516
Query: 569 ITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSA 628
+ AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 517 LKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMES---------------------- 554
Query: 629 EINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
L L+D SP+ L K ++ G+ D P P +
Sbjct: 555 ----LAWLSD-------------------SPLFDLIK-QSKDGEGPDNLEPACPLS---- 586
Query: 689 VLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA--------- 739
L + N T+ ++ PL P + S TR N ET A
Sbjct: 587 -LPLQGNHTAA---------DMYLSPLRSPKKRT--STTRVNSAANTETQAASAFHTQKP 634
Query: 740 --ETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHID 796
T + +F+ K+ +LA +R+N + RL ++ ++ LFQ L L +RH+D
Sbjct: 635 LKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLD 694
Query: 797 QIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVD 856
QI++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E++
Sbjct: 695 QIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDS 744
Query: 857 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSP 916
II FYN +F+ +K +++ P +S P +P SP
Sbjct: 745 IIVFYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSP 782
Query: 917 KKVSAT------HNVYVSPLRT 932
K S++ N+Y+SPL++
Sbjct: 783 YKFSSSPLRIPGGNIYISPLKS 804
>gi|395521038|ref|XP_003764628.1| PREDICTED: retinoblastoma-associated protein [Sarcophilus harrisii]
Length = 919
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 171/679 (25%), Positives = 287/679 (42%), Gaps = 163/679 (24%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM---DDSSLSSSLNI-----L 334
+T+T + +IL C+ EC NID +YF+N + ++SS + L
Sbjct: 258 ETDTRVIEIL----CKEHEC------NIDEVKNVYFKNFLPFLKSLGIASSNGLPEVENL 307
Query: 335 EKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPL 394
K Y+ ++D R+F++ D +L S+ + T K D PL
Sbjct: 308 SKQYEEIYLKNKDIDARLFLDHDKTL-QDDSVDSFEMERTPRKNHPDE--------EMPL 358
Query: 395 SPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDK 454
P + TPV M T + L ++ +PS L + +C
Sbjct: 359 IPPQ-------------------TPVRAVMNTIQQLVMILNSASDQPSENLISYFNNCTV 399
Query: 455 DVTTDVMRRAHIILEAIFP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYR 510
+ +++R I IF + +G+ C GS QR ++LYYR
Sbjct: 400 NPKESILKRVENI-GRIFKEKFAEAVGQGCAEIGS-------------QRYKLGVRLYYR 445
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFP 561
V+E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP
Sbjct: 446 VMESMLKSEEERLSIQNFSKLLNDNIFHTSLLACAVEVVMATYGRNTYQNHDSGTDLSFP 505
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
+L + AFD KVIESFI+ E SL RE+ +HL E R++ES+ W+ S +++ +
Sbjct: 506 WILNVLDLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAWQSDSPLFDLIKQ 565
Query: 622 ARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKR 681
++ R G P+ L + +N P+ H H + +RSPK+
Sbjct: 566 SK-------EREG----PVDHLLEPTSTLNL------PLQ--HNHTAADLYLSPVRSPKK 606
Query: 682 PCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAET 741
+ R N S P Q+ AS T+ P T
Sbjct: 607 KGSTARI--------------------NSASNAEP---QTTSASQTQKPPKS-------T 636
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQII 799
+++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI+
Sbjct: 637 SLSLFYKKVYRLAYLRLNTLCSRL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIM 695
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
+C YG+ K+ ++L F+ I+ Y+ + F+ V + E + II
Sbjct: 696 MCSMYGICKVKNIDLKFKIIVTAYKDLTHAIQETFKRVLI----------REGQYDSIIV 745
Query: 860 FYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV 919
FYN +F+ +K +++ P +S P +P SP K
Sbjct: 746 FYNLVFMQKLKTNILQYAST---------------------RPPTLSPIPHIPR-SPYKF 783
Query: 920 SAT------HNVYVSPLRT 932
S++ N+Y+SPL++
Sbjct: 784 SSSPLRVPGGNIYISPLKS 802
>gi|321465662|gb|EFX76662.1| hypothetical protein DAPPUDRAFT_322171 [Daphnia pulex]
Length = 1052
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 225/914 (24%), Positives = 384/914 (42%), Gaps = 143/914 (15%)
Query: 16 SNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF 75
S D + TE R LC + L++D+NT E + N I E +R
Sbjct: 4 SEDADQENTEERFRGLCAD-LNIDKNTADEAWR-----------NYETISTNYTLEGDRI 51
Query: 76 -WFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W LY+ R S N +L + R ++++DFF + ++
Sbjct: 52 HWLCCALYVACRNSTVPTVGQVGTVEGNCVSLTQLRRKCNISMLDFFDKSRKW------- 104
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGY- 193
+++ E R + L+ NF S++ K Y +++E F + +Q + +
Sbjct: 105 -ADMANLSEELRRKFVSLERNFEVCSVIFKKYDEMFKEIFQDPVNDPPRQPRSRKSRKLP 163
Query: 194 --ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV---------RFR 242
D + F W F+ ++ + ++LV+C + L++ L + + V +F
Sbjct: 164 CSAKDVYDFCWAFFVRIKTNFSQIHEELVSCFHLLLACLDYIYGNSLVANRRELFNPQFP 223
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSED-----DLRKIMEKTNTLIADILKKKPC 297
SR K + ++ L S ++S+D D+++I KT+ L +P
Sbjct: 224 GLPSDFHSRDYKAPTEPGCIVECLYS-RNSSQDEKTVVDVKRI--KTHVL-------RPY 273
Query: 298 EASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED 357
S + E L+ D L ++D + + ++ DY++ G+ DER+F +
Sbjct: 274 VKSLIEKEVLKG-DKRTLC---GILDTAVFDLNKKVVNNDYEDYVHRVGDFDERIF-SSP 328
Query: 358 DSLLGSGSLSGGAVNITGAKRKFDSLAS--PVKTITSPLSPHRSS---ASHPNGIAGGAT 412
D+L G T K F+S+AS K + P + S SH +A T
Sbjct: 329 DALTEIG---------TPVKATFNSIASFEEQKLMVYPARRNLQSQFDGSHHLALATPLT 379
Query: 413 SKMV--------VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA 464
+ VTPVSTA + L+ ++ + PS EL R C + + R
Sbjct: 380 GRNFLKAKEPGSVTPVSTATQSVSRLQALVSGRQTGPSEELRRIFSECSNNPGESIQARV 439
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLH 524
+ E + + G G + MD A +R LYY+VLE + E + L
Sbjct: 440 KEMGEKF--CAHYVNQADEGRTNGFS-MD--MARKRLQLGESLYYKVLEKIIIDERRRLK 494
Query: 525 A-KNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIR 583
A +L+ +L + H+ ++ C E+VL ++ + FP +LE I F KVIE IR
Sbjct: 495 AGTDLSGILQQDMLHQLLITCCLEIVLFSYNS-QRTFPWILEVFPIQPFYFYKVIEVLIR 553
Query: 584 HEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLLADPMP 641
E+ L R++ +HLN +EE++LESM W S ++ L + +P+ S E++ L P P
Sbjct: 554 AED-LSRDVVKHLNHMEEQILESMAWRYQSPLWEYLKSCDQPIPSCEEVSLPSQLLPPTP 612
Query: 642 SLDAIATHINFS------------------------------SGGLSPVHSLHK-HETSP 670
S + S S SPV S+ +E +P
Sbjct: 613 SAPQTPAVVQSSDPVRNTPQQPIPYSPSTYVTNKRAESSLAASLLQSPVSSVASVNERTP 672
Query: 671 GQN-------GDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPP--LQS 721
Q+ G P P + N + K L LN+ K + LP P + +
Sbjct: 673 AQSSRRKLFPGPETVPPSPSNTAATPASVGNAIKASSK---LELNDQKMELLPSPSVVTT 729
Query: 722 AFASPTRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQ-IRESVYCLF 779
A P R TG +++FF K LA+VR+ + RL+L ++ +R+ ++ F
Sbjct: 730 ADNKPKR------------TGSLSLFFRKFYHLASVRLQDLCNRLELYEEDLRKKIWTCF 777
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
+ + + + L +RH+DQI++C Y + K++ + F +I+ YR QP V+RSV +
Sbjct: 778 EFSVMKHSDLMQDRHLDQILMCAVYVICKVTGRDKNFTDIMRCYRTQPHASSHVYRSVLL 837
Query: 840 DWASARQSGRSEQD 853
AR+ SE+D
Sbjct: 838 -CTKARRGSASEED 850
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 24/133 (18%)
Query: 852 QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL 911
+D D+I FYN ++V ++ ++ +NR V P P V + P
Sbjct: 910 EDRGDLILFYNTVYVRRLQAFALKF--------SNRNRLVESLPLSPLPLQRHVPLSPR- 960
Query: 912 PDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRL 971
+KVSA H V++SPL+ + +ISHS +SPSKDL IN L
Sbjct: 961 -----RKVSAKHTVFISPLKGN----VISHSPLPMRYSFN------RSPSKDLQAINAFL 1005
Query: 972 NSNRRVRGTLNFD 984
R + L+++
Sbjct: 1006 REERPTKRLLSYE 1018
>gi|118483575|gb|ABK93685.1| unknown [Populus trichocarpa]
Length = 108
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/110 (77%), Positives = 95/110 (86%), Gaps = 3/110 (2%)
Query: 914 MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNS 973
MSPKKVS+ HNVYVSPLR+SKMDALIS+SSKSYYACVGESTHAYQSPSKDL IN+RLN
Sbjct: 1 MSPKKVSSAHNVYVSPLRSSKMDALISNSSKSYYACVGESTHAYQSPSKDLNAINNRLNG 60
Query: 974 NRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPD 1023
NR+ RGTLN D+ DVGLVSDSMVANSL LQNG+ A+++ A LK EQ D
Sbjct: 61 NRKARGTLNLDN---DVGLVSDSMVANSLGLQNGNCASTSGAALKSEQSD 107
>gi|55140503|gb|AAV41810.1| retinoblastoma-like protein [Chlamydomonas incerta]
Length = 1213
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 263/583 (45%), Gaps = 72/583 (12%)
Query: 78 AFVLYLVRRLS-----EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
A +L++ R LS EK+G ++ + ++ I+ V +N++DF +E+ + K
Sbjct: 71 ASLLFVARVLSAAQKKEKDGSEAKR--TNLGLSISRIVAVAGINLLDFIREVQVIVSKLS 128
Query: 133 PILSNIYGADWENRLEA--KELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAST 190
+ + + +A +E V + +L+K YK + F D
Sbjct: 129 AYFESRGSSSNQFSQQALLQETSETIVVMGLLAKKYKDNFNTFLHQLDF----------- 177
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSS 250
Y R GW FL LR+ S F D+V+C L I AIL H P + D
Sbjct: 178 --YKQVVLRLGWGAFLVLRVKLLSAFPDVVSCMELLPCIFAILASHAP------RLPDCL 229
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADIL-------KKKPCEASECK 303
+ + ++ L+ S+ + ++ M L+ + + EA
Sbjct: 230 AHITREDREKLLLKSMADVCKADYGRVQARMPTVEALLTQVFTSAVPEWRTAVAEAKASS 289
Query: 304 SENLENIDTDGLIYFENLMDD-SSLSSSLNILEKDYD-NATRNKGELDERVFINEDDSLL 361
+ ID E L+ + ++ ++ LE++Y+ + +R ELDER F++ D +
Sbjct: 290 PAAVGGIDLIASPVLEGLVTNMERMNRAVAALEREYEQHYSRGATELDEREFLSTDFTKF 349
Query: 362 GSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP--HRSSASHPN-------GIAGGAT 412
S LS G ++ T AK + + + P+++ LSP H + +HP G A
Sbjct: 350 ASPRLSPGHMHSTMAKLRSEPM--PLRS-GGLLSPGLHTTIPAHPGPQQMQLMGPAPWLH 406
Query: 413 SKMVV-----------TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVT---- 457
S + + TP+S AM + WLR V + ++PS L+R L + + T
Sbjct: 407 SPLPMMHLNAGPGLQGTPISEAMGASAWLRGVTSSMAAEPSPALQRLLAALPINSTGLGP 466
Query: 458 ---TDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEA 514
+M+R ++ ++ P + L +++ + +RR +A +LY LE
Sbjct: 467 TPAQLLMKRVRDLVASVIP-----DEAAPSVLGPFPMLNTSFGAERRTQAARLYCHSLET 521
Query: 515 MCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 574
+ E + +LL + +F R ++AC E+V A ++ + FP V++ I AFD+
Sbjct: 522 IMLNEERTNGLPAALALLGSAKFQRGLIACCIEVVAACYRMSSCAFPKVVDALRIKAFDM 581
Query: 575 SKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
+ +I +F++ +LPREL+RHL +EE++LE + W+ GSS+Y+
Sbjct: 582 ASIIGTFVKSIATLPRELKRHLFLIEEKILECLAWQPGSSLYH 624
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 731 PGGGGETCAETGINI-FFCKINKLAAVRINAMVERLQLSQ----QIRESVYCLFQQILNQ 785
P G + G+ F K+ KL + R+ + E + ++ VY + L +
Sbjct: 806 PPAAGTAHGQAGLLFEFLRKVLKLTSFRLALLCENVDFGPLERPEVSSKVYETIEHALYK 865
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASA 844
+T LF+NRHIDQ++L YG K+ +L+ ++FREII YRKQPQ + VFRSV ++ +
Sbjct: 866 QTHLFYNRHIDQVMLSTLYGYCKVHKLSQVSFREIIAQYRKQPQAQQSVFRSVVIEQS-- 923
Query: 845 RQSGRSEQDHVDIITFYNKIFVPAVKPLLVE 875
Q DII FYN +FVPA+K L++
Sbjct: 924 -MPTLQIQSRADIIAFYNAVFVPAMKSFLLK 953
>gi|74138763|dbj|BAE27194.1| unnamed protein product [Mus musculus]
Length = 748
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 164/683 (24%), Positives = 282/683 (41%), Gaps = 173/683 (25%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMD--DSSLSSSLNILEKDYDN 340
+ +T I ++L C+ EC + ++N+ I F N + S+ + L K Y+
Sbjct: 89 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFINSLGIVSSNGLPEVESLSKRYEE 144
Query: 341 ATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSS 400
+LD R+F++ D +L P+ + + +P ++
Sbjct: 145 VYLKNKDLDARLFLDHDKTLQ----------------------TDPIDSFETERTPRKN- 181
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
+P+ A T TPV T M T + L ++ +PS L + +C + ++
Sbjct: 182 --NPDEEANVVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENI 236
Query: 461 MRR----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
++R HI E ++ +G+ CV +Q L ++LYYRV+E+M
Sbjct: 237 LKRVKDVGHIFKEKF--ANAVGQGCVDIGVQRYKL------------GVRLYYRVMESML 282
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML---------FPAVLERT 567
+E + L +N + LL + FH +LAC+ E+V+AT+ T+ FP +L
Sbjct: 283 KSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVL 342
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 343 NLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMES--------------------- 381
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR 687
L L+D SP+ L K ++ G+ D P P +
Sbjct: 382 -----LAWLSD-------------------SPLFDLIK-QSKDGEGPDNLEPACPLS--- 413
Query: 688 SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCA-------- 739
L + N T+ ++ PL P + S TR N ET A
Sbjct: 414 --LPLQGNHTAA---------DMYLSPLRSPKKRT--STTRVNSAANTETQAASAFHTQK 460
Query: 740 ---ETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHI 795
T + +F+ K+ +LA +R+N + RL ++ ++ LFQ L L +RH+
Sbjct: 461 PLKSTSLALFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHL 520
Query: 796 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
DQI++C YG+ K+ ++L F+ I+ Y+ P + F+ V E++
Sbjct: 521 DQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQETFKRVLT----------REEEFD 570
Query: 856 DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMS 915
II FYN +F+ +K +++ P +S P +P S
Sbjct: 571 SIIVFYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RS 608
Query: 916 PKKVSAT------HNVYVSPLRT 932
P K S++ N+Y+SP+++
Sbjct: 609 PYKFSSSPLRIPGGNIYISPIKS 631
>gi|393904812|gb|EJD73805.1| retinoblastoma-associated protein A domain-containing protein [Loa
loa]
Length = 827
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 197/845 (23%), Positives = 351/845 (41%), Gaps = 175/845 (20%)
Query: 94 NLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL-VKSGPILSNIYGADWENRLE--AK 150
NL + + +++L +LR+ K+++++FF + +++ + +GP RL+
Sbjct: 5 NLFEHAVPKKYSLAKLLRICKISVLEFFDKATKWVEMINGP-----------RRLKDHIN 53
Query: 151 ELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRI 210
+Q++ +++ K I+R+ F P +N D S + + W LF+ +R
Sbjct: 54 RVQSSLAVAAVVFKKLLPIFRKIFAPPCSNDDDNSKDLNCKKLFT----LLWTLFIVMR- 108
Query: 211 HAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRF--------VKKSNKGVDL 262
+F ++ L++ +L+ V F++ + + ++ + +
Sbjct: 109 ---KQFN-----SDDLMNSFHLLLCTVDFIFQDLRRSEMASLLDGDFINAIEMQPEEDSI 160
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ +LC I++ D + + + + +++ E S E+L N + LI
Sbjct: 161 LETLCQIFEGVVLDAKHF--RAHCWLPR-MRRMSEEKSIETGEHLTNFAANELI------ 211
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
+ L+ Y+ +GE+DER+F+ D S++ + AV DS
Sbjct: 212 -------NKKKLDSMYEELIVKRGEMDERMFLPADISVVFDEAYDECAVQRLRHSEDGDS 264
Query: 383 LASP-------VKTITSPLSPHRSSAS--HPNGIAGGATSKMVVTPVSTAMTTAKWLRTV 433
L ++ L R + G A TPVS ++ A L +
Sbjct: 265 LVDADMLLRLSTQSCLERLQDQRQQRTPLTGRGYVISAEQYCPATPVSASLYNASRLEVL 324
Query: 434 ICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMD 493
+ + AE+E L +D +M +I+ S L ER ++
Sbjct: 325 LQDSWRRLDAEVESILCHSCQDPFGKIM---NIV-------SQLSER-----------LE 363
Query: 494 NIWAEQRRLEALKL--YYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLA 551
+ +R+L+ +R + A+ + L +++L E F + + CS +LVL
Sbjct: 364 EVIENERQLDGADYDASFREMFAIRKNNTECL----FSAVLLREDFLKALYVCSLQLVLF 419
Query: 552 THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 611
T+++V FP LE + A KVIE IR + SL RE+ +HLN +EER+LE W
Sbjct: 420 TYESVRE-FPWSLETMHLPAIHFYKVIELIIRADSSLSREMVKHLNKVEERVLEEFAWSL 478
Query: 612 GSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPG 671
S ++ SL AD +PS A++ L V + S
Sbjct: 479 DSPLWPSLHRR--------------ADDVPSSQAVS---------LETVEGYSMRQPSLS 515
Query: 672 QNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNP 731
Q + SP +P R + + ++ S+ + R P
Sbjct: 516 QRYTL-SPVKPLAAKRRLEFDDDD-------------------------SSCVAAKRRAP 549
Query: 732 GGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFF 791
G T + +FF K+ LAAVR+ + ER++L ++ R+ + LF+ +L TSL
Sbjct: 550 DGESLTPTSATL-LFFRKVYYLAAVRLRDLCERVRLDEKGRQRAWTLFEHVLRTETSLMA 608
Query: 792 NRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV-----------D 840
RH+DQ ++CC Y VAKI Q N++F +I+Y+YR QPQ +V+R V V D
Sbjct: 609 GRHLDQNLMCCLYVVAKIGQQNISFHDIMYHYRHQPQAASRVYRRVMVESNSSPPIILDD 668
Query: 841 WASARQSG-------RSEQ-------------------DHVDIITFYNKIFVPAVKPLLV 874
AS G RSE +++D+I +YN+IF+ VK +
Sbjct: 669 GASHDSVGSASDEKFRSESSVSGAVTGSGAATPEHQNVEYIDLIKYYNQIFISRVKSFVQ 728
Query: 875 ELGPA 879
+L P
Sbjct: 729 KLQPG 733
>gi|118150572|ref|NP_001071248.1| retinoblastoma-associated protein [Danio rerio]
gi|116487813|gb|AAI25967.1| Retinoblastoma 1 [Danio rerio]
Length = 903
Score = 169 bits (428), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 159/690 (23%), Positives = 284/690 (41%), Gaps = 171/690 (24%)
Query: 297 CEASECKSENLENI---------DTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGE 347
C+ +C + ++N+ D+ GL+ + L + L K Y+ +
Sbjct: 264 CKEGDCSVDEVKNVYQSTFCAFLDSVGLLGLQGL-------PPMEALSKQYEELYHKSKD 316
Query: 348 LDERVFINEDDSLLGSGSLSGGAVNITGAKRKF-DSLASPVKTITSPLSPHRSSASHPNG 406
D R+F++ DD L + V +T K F + +A PV
Sbjct: 317 FDARLFLS-DDETLSPNKIEVSKVEVTPRKNLFAEDIAIPVPQ----------------- 358
Query: 407 IAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHI 466
TP+ AMT+ + LR + +PS+ L + K+C D + ++ +R
Sbjct: 359 -----------TPIRAAMTSIQQLRGDLTSGSDQPSSNLLVYYKNCTVDPSGEIKKRVEE 407
Query: 467 ILEAIFP--SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLH 524
+ E + +G+ C +G +R +LYY+V+E+M +E + L
Sbjct: 408 LGEVFIQRFAQAVGQHC-----EGL-------GRKRFYLGAQLYYKVMESMLKSEEKRLS 455
Query: 525 AKNLTSLLTNERFHRCMLACSAELVLATHKTVT-------------------MLFPAVLE 565
+N + LL N FH +LAC+ E+V+AT+ + + FP +L
Sbjct: 456 VQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGRSSGASDSVESDLCFPWILS 515
Query: 566 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
+ AFD KVIESFI+ E +L ++ +HL E ++ES+ W S +++ L +R
Sbjct: 516 VFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCEHVIMESLAWRTDSPLFDLLKQSREE 575
Query: 626 LSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIR-SPKRPCT 684
E A+P +L+ P+H H H + D+ SP RPC
Sbjct: 576 GPGE------QAEPPATLN-------------QPLH--HNHTAA-----DLYLSPVRPCR 609
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGIN 744
PP ++ A P P G ++
Sbjct: 610 Q------------------------------PPVME---AEPPTP----GTRAPRSNSLS 632
Query: 745 IFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
+F+ K+ ++A +R+ + L S ++ ++ L Q L L +RH+DQ+I+
Sbjct: 633 LFYKKLYRMAYLRLKMLFSNLLTSHPEMEPIIWTLLQHTLQNEYELMRDRHLDQLIMSAM 692
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
Y + K+ ++L F+ I+ Y++ P + F+ V + E + II FYN
Sbjct: 693 YAICKVKNVDLRFKTIVTAYKELPNTNQETFKRVLI----------REGQYDSIIVFYNL 742
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH 923
+F+ +K +++ ++ + +S + H P SP + SP +V ++
Sbjct: 743 VFMQKLKTNILQY----SSPRPPPLSPIPH-----IPCSPYKN--------SPLRVPGSN 785
Query: 924 NVYVSPLRTSKMDALISHSSKSYYACVGES 953
NVYVSPL++S++ L+ +GES
Sbjct: 786 NVYVSPLKSSRVSPLVMTPRSRILISIGES 815
>gi|357446325|ref|XP_003593440.1| Retinoblastoma-related protein [Medicago truncatula]
gi|355482488|gb|AES63691.1| Retinoblastoma-related protein [Medicago truncatula]
Length = 238
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 98/142 (69%), Gaps = 18/142 (12%)
Query: 89 EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLE 148
EKN E+ + + LC ILR KLNI DFFKELPQF+VK+GPILSN + +DWEN+LE
Sbjct: 60 EKNEESEKDEIENTGLTLCRILRTTKLNIADFFKELPQFVVKAGPILSNRFSSDWENKLE 119
Query: 149 AKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLAL 208
AKE+ AN +HL ILS YKR + EFF+ +D HRFGWLLFLAL
Sbjct: 120 AKEMHANTIHLKILSVYYKRAFEEFFVSTDC------------------HRFGWLLFLAL 161
Query: 209 RIHAFSRFKDLVTCTNGLVSIL 230
R+HAF+ FKDLVTCTNGL+SI+
Sbjct: 162 RVHAFNHFKDLVTCTNGLISIM 183
>gi|324506107|gb|ADY42615.1| Retinoblastoma-associated protein [Ascaris suum]
Length = 533
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 247/549 (44%), Gaps = 78/549 (14%)
Query: 313 DGLIYFENLMDDSSLSSSLNI--LEKDYDNATRNKGELDERVFINED------DSLLGSG 364
DG I +N + + +++ N+ L + Y+ KGE+DER+FI D D+ S
Sbjct: 4 DGEIVADNELTNFFVNADTNLKKLNEVYEETMMKKGEMDERMFIPADVRTVFDDAFDASA 63
Query: 365 --SLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMV--VTPV 420
L AV+ + A L ++ LS HR + +G + + + TP+
Sbjct: 64 VEQLRRSAVDESWAVDAELLLRMSTQSCLERLSEHRQQQTPLSGKSYVISGEQFCPATPI 123
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKD---VTTDVMRRAHIILEAIFPSSGL 477
S ++ A + ++ PS ELER + C ++ D +R LE ++
Sbjct: 124 SGSLYNASKMEQLLSNEWQTPSEELERIMSQCRENPKVFIVDCLRLMGDKLE----NAVA 179
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVL---HAKNLTSLLTN 534
ER G A + I RR A KL+YR+LE + AE + + + +L+ +L
Sbjct: 180 AERESRGLDFDAAFTETI--SLRRENADKLFYRLLEKIIIAERERVSPNESPDLSVVLNK 237
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
E + C+ EL+L T+++ FP LE + K IE IR E L RE+ +
Sbjct: 238 EELIASIYVCALELILFTYES-EREFPWSLEVIRLAPVHFYKAIELVIRAEPELSREMVK 296
Query: 595 HLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATH-INFS 653
HLN +EER+LE + W S ++ T+AR AD +PS +++ + +
Sbjct: 297 HLNKIEERVLEELAWSVDSPLWQ--TLARR------------ADGVPSSQSVSLNSMEAY 342
Query: 654 SGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK 713
S + L + T SPVK L++ +K
Sbjct: 343 SARTQSTYGLSQRYT----------------------------LSPVK-----LSSAAAK 369
Query: 714 PLPPPLQSAFASPTRP--NPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQI 771
S R +P T A T +FF K+ LAAVR+ + ER+ L ++
Sbjct: 370 RRLEFDDDGVTSAKRIAIDPEWNATTSATT---LFFRKVYYLAAVRLQDLCERVHLDEKG 426
Query: 772 RESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKP 831
R V+ LF+ +L TSL RH+DQ ++CC Y VAKIS+ +++F I+Y+YR QPQ
Sbjct: 427 RHRVWTLFEHVLRTETSLMAGRHLDQNLMCCLYVVAKISKQDVSFHNIMYHYRHQPQASS 486
Query: 832 QVFRSVFVD 840
+V+R V +D
Sbjct: 487 RVYRQVLID 495
>gi|383857279|ref|XP_003704132.1| PREDICTED: retinoblastoma-like protein 1 [Megachile rotundata]
Length = 1039
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 170/645 (26%), Positives = 289/645 (44%), Gaps = 120/645 (18%)
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
VTPV+TA + L+ ++ S PS L + L C +DV T V + I E
Sbjct: 414 VTPVTTATQSVIRLQAMLAGQTS-PSENLLQILNGCSQDVKTLVESKVKEIGEQF----- 467
Query: 477 LGERCVT-GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
C AN + + ++R L+YR+LE + E + ++T+LL NE
Sbjct: 468 ----CANYNKSTNANETTSDFGKKRLYLGQTLFYRLLEKIVNDEKRKKPNYDVTNLLMNE 523
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
F +C+ AC E+V+ ++K+ +FP +L + A+ KVIE +R E+ L R++ +H
Sbjct: 524 VFIQCLFACCLEIVIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVKH 583
Query: 596 LNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLL--ADP----MPSLDAIA 647
LN +EE++LES+ W+ S +++++ + V S E++ G L DP P+L IA
Sbjct: 584 LNQIEEKILESLAWKSDSPLWSAIQSTPEGVPSCEEVSLPGTLETVDPNIPGQPALRRIA 643
Query: 648 ----THINFSSGGLSPVHSLHKHETSP-GQNGDIRSPKRPCTDYR--------------- 687
TH + SP+ S + SP +G I+ KR D R
Sbjct: 644 LDRGTHHDVQQ---SPISSASERFHSPVAASGAIK--KRLFPDTRISGQSVLRVAGQNVL 698
Query: 688 --SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFAS--PTRPNPGGGGETCAETGI 743
VL++ N+ + D++ + + P+Q+ + P RP G +
Sbjct: 699 PSKVLIDSNSRILLLPDQITVPRSSGVQASSSPMQTVTVNREPARPKRTG--------SV 750
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+FF K LA+VR+ + L++ +++ ++ +F+ + RT L +RH+DQI++C
Sbjct: 751 ALFFRKFYNLASVRMLDLCGSLEIMDIDLKKKIWTIFEYSIKDRTELMKDRHLDQILMCA 810
Query: 803 FYGVAKISQLNL-TFREIIYNYRKQPQCKPQVFRSVFV-------DWASARQSGR----- 849
Y + K++++ +F EI+ YR QPQ + ++RSV + ++ +SG+
Sbjct: 811 IYVICKLAKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSDESQKASEESGQKDVTD 870
Query: 850 --------------------SEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVS 889
E+ D+I FYN ++VP VK + +LG A ++ +
Sbjct: 871 KEPNVAPPTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEVANKLGLARGSVTS---- 926
Query: 890 EVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL-RTSKMDALISHSSKSYYA 948
+S+ P LP P S V S + RT A+ + +
Sbjct: 927 ---------------LSLSP-LPKGKPPTSSPVRRVTSSIMTRTLDPKAISASPAPQLSY 970
Query: 949 CVGESTHAYQSPSKDLTDINHRLNS---NRRVRGTLNFDDVDVDV 990
C +SP+KDL IN + S R V L DD DV++
Sbjct: 971 CFS------RSPAKDLEAINKMMISVDPKRSVGKRLLSDDTDVEM 1009
>gi|332017056|gb|EGI57855.1| Retinoblastoma-like protein 1 [Acromyrmex echinatior]
Length = 1042
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 235/970 (24%), Positives = 413/970 (42%), Gaps = 159/970 (16%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
D+ R DLC+ L++D E K + + N E + W +
Sbjct: 9 DSMYGRHQDLCQK-LNMDAAAASEAWKSYETIRQ----------NYTLEGDQLHWIGCAV 57
Query: 82 YLV-RRLS----EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
Y+ R+ S + G N++ N +L +L++ L ++ FF + KS ++
Sbjct: 58 YVACRKFSIPTVGRPGTNVE----GNCVSLTRLLQLCNLPLIQFFTK-----SKSWADMA 108
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISD 196
N+ D+ R+E +L+ANF ++ K Y+ I+ + F + K +
Sbjct: 109 NM-PQDFRARIE--KLEANFSVSMVIFKKYQPIFADIFKDPREDTSKPHRSRRHKAMPCT 165
Query: 197 YHR---FGWLLFLALR--IHAFS-----RFKDLVTC-----TNGLVSILAILI-IHVPVR 240
R F W LF+ ++ IH S + L+ C +N L+S L+ + P
Sbjct: 166 PTRVFEFCWTLFICIKGAIHDISDDLVNSYHLLLVCCDLIYSNALLSNRKDLLNPNFPGL 225
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEA 299
NFN D+ + +N V+L LC +D + + I E I + +K
Sbjct: 226 PTNFN-DDNYPPPQAANCIVNL---LCERHDAIAVEAKAIKEYCMKNYINKLFNEKILRG 281
Query: 300 SECK-SENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDD 358
+ S LE+++ DG + + K Y+ + G+ DER+F+ E
Sbjct: 282 DQSNFSGMLESLNFDG---------------NNKAINKSYEQRMLSVGDFDERIFLAEWR 326
Query: 359 SLL----------GSGSLSGGAV---NITGAKRKFDSLASPVKTIT-----SPLSPHRSS 400
L+ G + G I +++ SP + + L R
Sbjct: 327 RLILNNISISNIFGQNNAKHGQFIKYEILQGHNANENIGSPTQMMNIDDFHEKLQMQREQ 386
Query: 401 ASH------PNGIAGGA--TSKMV--VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLK 450
+ P + G SK + +TPV+TA + L+ +I S PS L + L
Sbjct: 387 HAGQYNLAPPTPLTGRKYLRSKDMSNITPVTTATQSVIKLQALIAG-QSAPSESLLQILN 445
Query: 451 SCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYR 510
+C +DV + + + I E + +T G+ + + ++R L L+Y+
Sbjct: 446 NCSQDVKSSLEAKVKQIGEQFCANYNNNNANITNVNDGSA---SDFGKKRLLMGQTLFYK 502
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGIT 570
+LE + E + ++T+LL N F +C+ AC E+V+ ++K+ +FP +L+ +
Sbjct: 503 LLEMILNDEKRKKPNDDITNLLLNAVFIQCLFACCLEIVIYSYKSNDKVFPWILKALNLD 562
Query: 571 AFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA- 628
A+ KVIE +R E+ L R++ +HLN +EE++LES+ W+ S ++ ++ ++ V S
Sbjct: 563 AYYFYKVIEIIVRAEDQLSRDVVKHLNHIEEKILESLAWQSDSPLWQTIESLLDGVPSCE 622
Query: 629 EINRLGLL--ADP----MPSLDAIATHINFSSGGL--SPVHSLHKHETSPGQNGDIRSPK 680
E++ G L ADP P L IA + + SP+ S + SP + K
Sbjct: 623 EVSLPGTLETADPNAPGQPVLRRIALDRERTQHDVQQSPISSASERFQSPVPASGT-AKK 681
Query: 681 RPCTDYR----SVLVERNNFTSPVKDRLLGLNNLKSKPLP-------PPLQSAFASPTRP 729
R ++ R SVL + S +R+L N + LP P A + T+
Sbjct: 682 RLFSETRVTGQSVLRVGQSVLS--TNRMLVDNGHRILLLPEQIVVSKPSSTQALNNSTQA 739
Query: 730 NPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
N TG + +FF K LA VR+ + L++S ++ ++ +F+ + +RT
Sbjct: 740 NKDATKP--KRTGSVALFFRKFYNLACVRMQDLCNSLEISDNDKKKIWTIFEYSVKERTK 797
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNL-TFREIIYNYRKQPQCKPQVFRSVFVDWAS---- 843
L +RH+DQI++C Y + K+ ++ +F EI+ YR QPQ + ++RSV ++ S
Sbjct: 798 LMKDRHLDQILMCAIYVICKLVRIERNSFTEIMRCYRLQPQAESHIYRSVLIEKVSNDGD 857
Query: 844 --ARQSGRSEQDHV---------------------------DIITFYNKIFVPAVKPLLV 874
+ RSE + D+I FYN ++VP VK
Sbjct: 858 SKTNSNERSENNSTSVAENVTPPTPTNMAGTSQNFDGEIRGDLIKFYNTMYVPQVKEFAN 917
Query: 875 ELGPA-GTAM 883
+ G A G+ M
Sbjct: 918 KFGSARGSVM 927
>gi|380025341|ref|XP_003696433.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Apis florea]
Length = 1039
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 173/638 (27%), Positives = 281/638 (44%), Gaps = 106/638 (16%)
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
VTPVSTA + L+ ++ S PS L + L +C +DV T V +
Sbjct: 414 VTPVSTATQSVIRLQAMLAGQTS-PSENLLQILNNCSQDVKTLVETKVK----------E 462
Query: 477 LGER-CVT-GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
LGE+ C AN + + +R L+YR+LE + E + ++T+LLT
Sbjct: 463 LGEQFCANYNRSTNANETTSDFGRKRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTK 522
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
E F +C+ AC E+V+ ++K+ +FP +L + A+ KVIE +R E+ L R++ +
Sbjct: 523 EIFIQCLFACCLEIVIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVK 582
Query: 595 HLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLL--ADP----MPSLDAI 646
HLN +EE++LES+ W+ S ++N++ + V S E++ G+L DP P L I
Sbjct: 583 HLNQIEEKILESLAWQSDSPLWNAIQSTPEGVPSCEEVSLPGMLETVDPNIPGQPVLRRI 642
Query: 647 A----THINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR----SVLVERNNFTS 698
A TH + SP+ S + SP + + KR +D R SVL
Sbjct: 643 ALDRGTHHDVQQ---SPISSASERFQSPVAASGV-AKKRLFSDTRIGGQSVLRGTGQSVL 698
Query: 699 PVK-------DRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG-INIFFCKI 750
P K R+L L + P +Q+ A TG + +FF K
Sbjct: 699 PSKVLTIDSNSRILFLPEPITVPRSSNVQTTAAPIQTVTINRESAKPKRTGSVALFFRKF 758
Query: 751 NKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKIS 810
LA+VR+ + L+ ++ ++ +F+ + +RT L +RH+DQI++C Y + K+
Sbjct: 759 YNLASVRMLDLCGSLENGYXFKKKIWTIFEYSIKERTELMKDRHLDQILMCAIYVICKLV 818
Query: 811 QLNL-TFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRS------------------- 850
++ +F EI+ YR QPQ + ++RSV + + +S ++
Sbjct: 819 KMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGESQKNNEEIRQKDVSDKETNVAPP 878
Query: 851 -------------EQDHVDIITFYNKIFVPAVKPLLVELGPA-GTAMKTNRVSEVNHNND 896
E+ D+I FYN ++VP VK + + G G+ M
Sbjct: 879 TPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEMANKFGLVRGSVM------------- 925
Query: 897 GPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL-RTSKMDALISHSSKSYYACVGESTH 955
+S+ P LP P S V S + RT A+ + + C
Sbjct: 926 -------NLSLSP-LPKGKPPANSPVRRVTSSIMTRTLDPKAISASPAPQLSYCFS---- 973
Query: 956 AYQSPSKDLTDINHRLNS---NRRVRGTLNFDDVDVDV 990
+SP+KDL IN + S R V L DD DV++
Sbjct: 974 --RSPAKDLEAINKMMISVDPKRSVGKRLLSDDTDVEM 1009
>gi|328791078|ref|XP_395096.4| PREDICTED: retinoblastoma-family protein [Apis mellifera]
Length = 1040
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 173/639 (27%), Positives = 283/639 (44%), Gaps = 107/639 (16%)
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
VTPVSTA + L+ ++ S PS L + L +C +DV T V +
Sbjct: 414 VTPVSTATQSVIRLQAMLAGQTS-PSENLLQILNNCSQDVKTLVETKVK----------E 462
Query: 477 LGER-CVT-GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
LGE+ C AN + + +R L+YR+LE + E + ++T+LLT
Sbjct: 463 LGEQFCANYNRSTNANETTSDFGRKRLYLGQTLFYRLLEMILNDEKRKKPNYDVTNLLTK 522
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
E F +C+ AC E+V+ ++K+ +FP +L + A+ KVIE +R E+ L R++ +
Sbjct: 523 EIFIQCLFACCLEIVIYSYKSNDKIFPWILNALNLDAYYFYKVIEIIVRAEDQLSRDVVK 582
Query: 595 HLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSA-EINRLGLL--ADP----MPSLDAI 646
HLN +EE++LES+ W+ S ++N++ + V S E++ G+L DP P L I
Sbjct: 583 HLNQIEEKILESLAWQSDSPLWNAIQSTPEGVPSCEEVSLPGMLETVDPNIPGQPVLRRI 642
Query: 647 A----THINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR----SVLVERNNFTS 698
A TH + SP+ S + SP + + KR +D R SVL
Sbjct: 643 ALDRGTHHDVQQ---SPISSASERFQSPVAASGV-AKKRLFSDTRIGGQSVLRGTGQSVL 698
Query: 699 PVK-------DRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETG-INIFFCKI 750
P K R+L L + P +Q+ A TG + +FF K
Sbjct: 699 PSKVLTIDSNSRILFLPEQITVPRSSSVQTTAAPIQTVTINRESAKPKRTGSVALFFRKF 758
Query: 751 NKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKI 809
LA+VR+ + L++ +++ ++ +F+ + +RT L +RH+DQI++C Y + K+
Sbjct: 759 YNLASVRMLDLCGSLEIMDIDLKKKIWTIFEYSIKERTELMKDRHLDQILMCAIYVICKL 818
Query: 810 SQLNL-TFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRS------------------ 850
++ +F EI+ YR QPQ + ++RSV + + +S ++
Sbjct: 819 VKMEKNSFTEIMRCYRLQPQAESHIYRSVLIAKTPSGESQKNNEEIKQKDVSDKETNVAP 878
Query: 851 --------------EQDHVDIITFYNKIFVPAVKPLLVELGPA-GTAMKTNRVSEVNHNN 895
E+ D+I FYN ++VP VK + + G G+ M
Sbjct: 879 PTPTNMAGTSQNFGEETRGDLIKFYNTVYVPQVKEMANKFGLVRGSVM------------ 926
Query: 896 DGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPL-RTSKMDALISHSSKSYYACVGEST 954
+S+ P LP P S V S + RT A+ + + C
Sbjct: 927 --------NLSLSP-LPKGKPPANSPVRRVTSSIMTRTLDPKAISASPAPQLSYCFS--- 974
Query: 955 HAYQSPSKDLTDINHRLNS---NRRVRGTLNFDDVDVDV 990
+SP+KDL IN + S R V L DD DV++
Sbjct: 975 ---RSPAKDLEAINKMMISVDPKRSVGKRLLSDDTDVEM 1010
>gi|387018056|gb|AFJ51146.1| Retinoblastoma-associated protein-like [Crotalus adamanteus]
Length = 916
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 177/773 (22%), Positives = 314/773 (40%), Gaps = 157/773 (20%)
Query: 178 DANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHV 237
D D+ A S+ +I + W++FL + DLV L+ + I +
Sbjct: 164 DKPNDQTCAEISSCLFI----KRCWIMFLLAKGKILQMEDDLVISFQLLLCVFDYCIKQL 219
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKI-MEKTNTLIADILKKKP 296
P+ +K+ K V +++ S + + R KT++ I I ++
Sbjct: 220 PLAL-----------LKEPYKSVIAVSANGSSRTSRQSQNRSTRTSKTDSDIKVI--EEL 266
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSS--SLNILEKDYDNATRNKGELDERVFI 354
C+ +C + ++N+ I F N M ++ + + Y+ ++D R+F+
Sbjct: 267 CKEYDCNMDEVKNVYFTSFIPFLNSMGITTFRGLPEVEDMSSKYEEMYLKNKDIDARLFL 326
Query: 355 NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSK 414
+D++L + + K S SP+ + P
Sbjct: 327 EKDETLQYENP---ECLQLDRTPTKNQSEDSPI------ILPQ----------------- 360
Query: 415 MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAH---IILEAI 471
TPV AM+T + L ++ PS L + +C + +++R I +
Sbjct: 361 ---TPVRAAMSTIQQLMIILNSASDTPSDNLLFYFNNCTVNPHEVIVKRIENMGITFKNK 417
Query: 472 FPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
F + +G+ C GS QR ++LYYRV+E++ +E Q L N +
Sbjct: 418 F-AEAVGQGCAEIGS-------------QRYKIGVRLYYRVMESLLKSEEQRLSVHNFSK 463
Query: 531 LLTNERFHRCMLACSAELVLATHKT-----------VTMLFPAVLERTGITAFDLSKVIE 579
LL N+ FH +LAC+ ELV+AT+ T + FP ++ + AF+L ++E
Sbjct: 464 LLNNDIFHISLLACALELVMATYGTSRNASQSMKIETDLSFPWIINILDLKAFELYMIVE 523
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADP 639
SFI+ E SL RE+ +HL E +++ES+ W+ S ++ + ++ +R G +P
Sbjct: 524 SFIKAEPSLTREMIKHLEGCEHKIMESLAWQSNSPLFELIKQSK-------DREGQTDEP 576
Query: 640 MPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSP 699
P+ N+ + L HS SP +SPK+ + F
Sbjct: 577 EPA--------NYFTQPLQHNHSAADLYLSPT-----KSPKKKVSP---------AFVYS 614
Query: 700 VKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRIN 759
+ + LGLN P +P ++ F+ K+ LA R+N
Sbjct: 615 QESQGLGLNQ----------------PQKPYKS--------ISLSYFYKKVYCLAYRRLN 650
Query: 760 AMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFRE 818
++ RL ++ ++ LF L L +RH+DQI++C YG+ K+ ++L F+
Sbjct: 651 SLCLRLLPDHPELEHLIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGICKVKNIDLRFKT 710
Query: 819 IIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGP 878
I+ Y+ + F+ V + E + II FYN +F+
Sbjct: 711 IVTAYKDLNNANQETFKCVLI----------REGQYDSIIVFYNMVFM------------ 748
Query: 879 AGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLR 931
+KTN + + N P + P SP +VSA +N+YVSPL+
Sbjct: 749 --QRLKTN-ILQYASNRPPTLTPIPHILQSPYKFSNSPLRVSAGNNIYVSPLK 798
>gi|159155246|gb|AAI54731.1| Rb1 protein [Danio rerio]
Length = 903
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/690 (22%), Positives = 282/690 (40%), Gaps = 171/690 (24%)
Query: 297 CEASECKSENLENI---------DTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGE 347
C+ +C + ++N+ D+ GL+ + L + L K Y+ +
Sbjct: 264 CKEGDCSVDEVKNVYQSTFCAFLDSVGLLGLQGL-------PPMEALSKQYEELYHKSKD 316
Query: 348 LDERVFINEDDSLLGSGSLSGGAVNITGAKRKF-DSLASPVKTITSPLSPHRSSASHPNG 406
D R+F++ DD L + V +T K F + +A PV
Sbjct: 317 FDARLFLS-DDETLSPNKIEVSKVEVTPRKNLFAEDIAIPVPQ----------------- 358
Query: 407 IAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHI 466
TP+ AMT+ + LR + +PS+ L + K+C D + ++ +R
Sbjct: 359 -----------TPIRAAMTSIQQLRGDLTSGSDQPSSNLLVYYKNCTVDPSGEIKKRVEE 407
Query: 467 ILEAIFP--SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLH 524
+ E + +G+ C +G +R +LYY+V+E+M +E + L
Sbjct: 408 LGEVFIQRFAQAVGQHC-----EGL-------GRKRFYLGAQLYYKVMESMLKSEEKRLS 455
Query: 525 AKNLTSLLTNERFHRCMLACSAELVLATHKTVT-------------------MLFPAVLE 565
+N + LL N FH +LAC+ E+V+AT+ + + FP +L
Sbjct: 456 VQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGRSSGASDSVESNLCFPWILS 515
Query: 566 RTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
+ AFD KVIESFI+ E +L ++ +HL ++ES+ W S +++ L +R
Sbjct: 516 VFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCGHVIMESLAWRTDSPLFDLLKQSREE 575
Query: 626 LSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIR-SPKRPCT 684
E A+P +L+ P+H H H + D+ SP RPC
Sbjct: 576 GPGE------QAEPPATLN-------------QPLH--HNHTAA-----DLYLSPVRPCR 609
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGIN 744
PP ++ A P P G ++
Sbjct: 610 Q------------------------------PPVME---AEP----PAPGTRAPRSNSLS 632
Query: 745 IFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
+F+ K+ ++A +R+ + L S ++ ++ Q L L +RH+DQ+I+
Sbjct: 633 LFYKKLYRMAYLRLKMLFSNLLTSHPEMEPIIWTPLQHTLQNEYELMRDRHLDQLIMSAM 692
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
Y + K+ ++L F+ I+ Y++ P + F+ V + E + II FYN
Sbjct: 693 YAICKVKNVDLRFKTIVTAYKELPNTNQETFKRVLI----------REGQYDSIIVFYNL 742
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH 923
+F+ +K +++ ++ + +S + H P SP + SP +V ++
Sbjct: 743 VFMQKLKTNILQY----SSPRPPPLSPIPH-----IPCSPYKN--------SPLRVPGSN 785
Query: 924 NVYVSPLRTSKMDALISHSSKSYYACVGES 953
NVYVSPL++S++ L+ +GES
Sbjct: 786 NVYVSPLKSSRVSPLVMTPRSRILISIGES 815
>gi|255088904|ref|XP_002506374.1| retinoblastoma protein [Micromonas sp. RCC299]
gi|226521646|gb|ACO67632.1| retinoblastoma protein [Micromonas sp. RCC299]
Length = 1341
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 144/279 (51%), Gaps = 51/279 (18%)
Query: 729 PNPGGGGETCAET--------GINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
P+P GG + + + + +FF K+ +L+A R+ + ERL L + + Y L +
Sbjct: 1012 PSPNGGAASSSTSVPDPAVVNSLRVFFAKVMRLSARRLADLCERLSLPAALTQQSYALVE 1071
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQ------LNLTFREIIYNYRKQPQCKPQVF 834
L + TSL +NRH+DQ++LC YG K+++ + FREIIY Y KQPQC+ +VF
Sbjct: 1072 HALYEHTSLLYNRHLDQVLLCAVYGACKVNKDMLLKGRTVPFREIIYQYEKQPQCREEVF 1131
Query: 835 RSVFVDWA----SARQSGRSEQDHVDIITFYNKIFVPAVKPLLVEL--------GPAGTA 882
+V + +Q G DII FYNK+FVP +K L+ L GP+
Sbjct: 1132 WTVILTQTDPELEVKQQG-------DIIEFYNKVFVPEIKAFLLSLKSRSPASAGPSPMK 1184
Query: 883 MKTNRVSEVNHNNDGPCPG---SPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALI 939
+ N P P SP+V + NVYVSP+R+ K A +
Sbjct: 1185 SPSGGPQTANAAPMSPLPAGLQSPRVMLG-----------GIRQNVYVSPMRSDKALASL 1233
Query: 940 SHS----SKSYYACVGESTHAYQSPSKDLTDINHRLNSN 974
+ + SKS YA +GESTHAYQSP++DL IN R++S+
Sbjct: 1234 AGTFTPRSKSLYAFLGESTHAYQSPARDLNFINRRISSS 1272
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 130/284 (45%), Gaps = 72/284 (25%)
Query: 408 AGGATSKMVVTPVSTAMTTAKWLRTVICP-----LPSKPSAELE---RFLKSCDKDVTTD 459
AG T + TP+S AM +A WL ++ P P +PS +LE R + +V
Sbjct: 575 AGPRTPAVPFTPISEAMASAAWLHAIVAPPSPNGTPKRPSGQLEPTQRLARFVSDEVAKK 634
Query: 460 VMRRAHIILEAIFPSSGLGERCVTGSLQGANLM---------DNIWAEQRRLEALKLYYR 510
+M H + S+ L E ++ G L+ DN+ ++R+ EA++++
Sbjct: 635 LMDSVHNLAGKT--SAALREDAFLVTINGVGLLAGQGHNVSLDNL-VKRRQEEAVRVFAY 691
Query: 511 VLE---------------------------AMCTAEAQ---------------------- 521
LE A TAE +
Sbjct: 692 FLELILENEQRHVIRQAEAAKPPAKPPAKTASPTAERRGSVADIAAIAAEQKEDALLPPP 751
Query: 522 ---VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 578
+LL + RF R +LACS E+V+A++KT T+ FPA+ G+ AFD+S +I
Sbjct: 752 PPTAAQRAGFEALLGSGRFVRSVLACSMEVVVASYKTATLKFPAIPRLLGLDAFDVSSII 811
Query: 579 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
E F+R + ++PRE+++H N+LEE ++E++ W KGSS++ + A
Sbjct: 812 EPFVRADTTMPREVKKHFNALEETIMETLAWSKGSSLFGFMRAA 855
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 116/331 (35%), Gaps = 81/331 (24%)
Query: 30 DLCKNGLSVDENTYKEIIKLFRETKHLLLA-NISAIGNGMPEEAERFWFAFVLYLVRRLS 88
+ C + L D + K + E L++ ++ + M E + AF+ +RR S
Sbjct: 40 EACASRLGYDADEVKAASDILMEAAPLMVGKHVVVPDDSMNPEQWQACAAFIAAGIRRAS 99
Query: 89 EKNGENLQQGSNDNEF----------NLCHILRVMKLNIVDFFKELPQFLV--------- 129
E + +L +LR +N VDFF+ L +F++
Sbjct: 100 EHASTAASRSGGKKRPAPPAPPDAVASLTDVLRAFDVNCVDFFRALRKFMMAAAVPLNAR 159
Query: 130 -----------------KSGPI----------------LSNIYGADWEN----------R 146
+ GP L G++ EN
Sbjct: 160 LKVAAKPTGRKAGGSDRRGGPASPAEAPNDDASCDDAGLQRSPGSNAENDVTNGGEGLNE 219
Query: 147 LEA----KELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGW 202
LEA EL+ +F + ++ Y R+F D A+ G D R GW
Sbjct: 220 LEALLSVSELRTSFAFTKVAAQKY----RQFL-------DVHFDVAAPGGV--DLARLGW 266
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKG-VD 261
L+LA + +F DL +C + LV + A L+++ P + + K + G VD
Sbjct: 267 KLYLAAKHSLLPKFPDLYSCYHLLVVVQAFLLVNAPRGLTRTELRNMVSMSVKDDAGDVD 326
Query: 262 LIASLCSIYDTSEDDLRKIMEKTNTLIADIL 292
+ASL T LR ME +I L
Sbjct: 327 ALASLSVTSKTKLPLLRSTMEDFQRVIVQGL 357
>gi|149635912|ref|XP_001514098.1| PREDICTED: retinoblastoma-associated protein [Ornithorhynchus
anatinus]
Length = 917
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 153/661 (23%), Positives = 273/661 (41%), Gaps = 150/661 (22%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----LEKDYDNATRNKGELDER 351
C+ +C + ++N+ I F N + ++ + + + L K Y+ ++D R
Sbjct: 265 CKEHDCNIDEVKNVYFKNFIPFLNSLGIAASNGTSGLPEVENLSKQYEKIYLKNKDMDAR 324
Query: 352 VFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGA 411
+F++ D +L S + T K D L P +
Sbjct: 325 LFLDHDKTLQTQPSDLSSEIEKTPQKNNPDEEVQ--------LIPPQ------------- 363
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
TPV M T + L ++ +PS L + +C + +++R I I
Sbjct: 364 ------TPVRAVMNTIQQLMMILNTASDQPSENLISYFNNCTVNPKESILKRVETI-GCI 416
Query: 472 FP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKN 527
F + +G+ C+ GS QR ++LYYRV+E+M +E + L +N
Sbjct: 417 FKEKFAETVGQGCIEIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQN 463
Query: 528 LTSLLTNERFHRCMLACSAELVLATH-------KTVTMLFPAVLERTGITAFDLSKVIES 580
+ LL + FH +LA + E+V+AT+ FP +L + AFD KVIES
Sbjct: 464 FSKLLNDNTFHTSLLASAVEIVMATYGRSGSQNNGAGTDFPWILNVLDLKAFDFYKVIES 523
Query: 581 FIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPM 640
FI+ E SL RE+ +HL E R++ES+ W+ S +++ + ++ R G P
Sbjct: 524 FIKAEASLTREMIKHLERCEHRIMESLAWQSDSPLFDLIKQSK-------EREGPADHPE 576
Query: 641 PSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPV 700
P+ + +N P+ H H + +RSPK+ R
Sbjct: 577 PT-----STLNL------PLQ--HSHTAADLYLSPVRSPKKKGATVR------------- 610
Query: 701 KDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE-TGINIFFCKINKLAAVRIN 759
+ S+ + + G + + T +++F+ K+ +LA +R+N
Sbjct: 611 ------------------VNSSQNTEAQTTSGSQIQKQQKSTSLSLFYKKVYRLAYLRLN 652
Query: 760 AMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFR 817
++ RL LS ++ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+
Sbjct: 653 SLCSRL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFK 711
Query: 818 EIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELG 877
I+ Y+ + F+ V + E + II FYN +F+ +K +++
Sbjct: 712 MIVTAYKDLTHAIQETFKRVLI----------REGQYDSIIVFYNLVFMQKLKTNILQYA 761
Query: 878 PAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLR 931
P +S P +P SP K S++ N+Y+SPL+
Sbjct: 762 ST---------------------RPPTLSPIPHIP-RSPYKFSSSPLRVPGGNIYISPLK 799
Query: 932 T 932
+
Sbjct: 800 S 800
>gi|348583|pir||A44879 retinoblastoma protein - clawed frog
gi|255082|gb|AAB23173.1| retinoblastoma protein, pXRb1 [Xenopus, Peptide, 899 aa]
Length = 899
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 170/714 (23%), Positives = 286/714 (40%), Gaps = 174/714 (24%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----LEKDYDNATRNKGELDER 351
C + C + + N+ + + F + + +SS+ I + + Y+ +LD R
Sbjct: 255 CSQNYCPMDEVRNVYSTSFVDF---LASAGISSNEGIPKVESISRQYEELYHKHKDLDAR 311
Query: 352 VFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGA 411
+F+ D++L ++++ RK +S PV P
Sbjct: 312 LFLENDETLKVDVQ---DSLDLERTPRKDESEVFPV-------PPQ-------------- 347
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR----AHII 467
TPV AM T + L + KP L+ + +C + T + R H+
Sbjct: 348 ------TPVRGAMNTVQQLMVTLSSANDKPPDTLDSYFSNCTVNPKTKITDRIEHFGHVF 401
Query: 468 LEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKN 527
E +S +G+ C Q L + LYYRV+EA+ E + L N
Sbjct: 402 KEKF--ASSVGQACAEIGYQRYKL------------GVCLYYRVMEAILKTEEERLSVHN 447
Query: 528 LTSLLTNERFHRCMLACSAELVLATHKT----------VTMLFPAVLERTGITAFDLSKV 577
+ LL N+ FH C+LAC+ E+V+A++ + FP +L I AFD KV
Sbjct: 448 FSKLLNNDIFHICLLACAVEVVVASYARNASQAYCSSGTNLSFPWILRAFEIKAFDFYKV 507
Query: 578 IESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLA 637
IE FI+ E SL + ++L E +++E + W+ S +++ + R R GL+
Sbjct: 508 IECFIKAEPSLTSNMIKYLERCEHQIMECLAWQSDSPLFDLIKQTR-------EREGLVD 560
Query: 638 DP--MPSLDAIATHINFSSG-GLSPVHSLHKH-----ETSPGQNGDIRSPKRPCTDYRSV 689
P + +L H + ++ LSP S H+H TS NG + S
Sbjct: 561 HPELVSNLQQPVQHNHTAADLYLSPSRSSHQHPVTSVPTSSVTNGQVSS----------- 609
Query: 690 LVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCK 749
+ PV+ + T +++F+ K
Sbjct: 610 -------SQPVQQK------------------------------------STSLSLFYKK 626
Query: 750 INKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAK 808
+ LA R++++ L ++ + ++ L Q L Q L +RH+DQI++C YG+ K
Sbjct: 627 VYLLAYKRLSSLCSSLLSDHPELEQVIWTLLQHTLQQEYELMRDRHLDQIMMCSMYGICK 686
Query: 809 ISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPA 868
++L F+ I+ Y+ + F+ V + + H II FYN +F+
Sbjct: 687 AKNIDLRFKTIVTAYKGLTNTNQETFKHVLI----------RDGQHDSIIVFYNLVFMQK 736
Query: 869 VKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVS 928
+K +++ G A H P P P+ P SPK N+YVS
Sbjct: 737 LKSHILQYGSA------------RHPTLSPIPHIPRS---PYRFGNSPK---VPGNIYVS 778
Query: 929 PLRT--SKMDALISHS----SKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
PL+T D L+S S S+ +GE+ ++SP + IN LNS R
Sbjct: 779 PLKTPYKTADGLLSPSKMTPKTSFLISLGET---FRSPDR-FQKINQMLNSCER 828
>gi|307182540|gb|EFN69736.1| Retinoblastoma-like protein 1 [Camponotus floridanus]
Length = 1039
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 252/535 (47%), Gaps = 89/535 (16%)
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV+TA + L+ +I S PS L + L +C +DV + V + I E
Sbjct: 413 ITPVTTATQSVIKLQALIAG-QSTPSEGLLQMLSNCSQDVKSSVEAKVKQIGEQF----- 466
Query: 477 LGERCVTGSLQGANLMDNI-------WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
C AN +N+ + ++R + L+Y++LE + E + ++T
Sbjct: 467 ----C-------ANYNNNVNDGSTSDFGKKRFVMGQTLFYKLLEMILNDEKRKKPNDDIT 515
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+LL NE F +C+ AC E+V+ ++K+ +FP +L+ + A+ KVIE +R E+ L
Sbjct: 516 NLLLNEVFIQCLFACCLEIVIYSYKSNDKIFPWILKALNLDAYYFYKVIEIIVRAEDQLS 575
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL-TVARPVLSAE-INRLGLL--ADP----MP 641
R++ +HLN +EE++LES+ W S ++ ++ ++ V S E ++ G L DP P
Sbjct: 576 RDVVKHLNQIEEKILESLAWRSDSPLWQTIESLPDGVPSCEEVSLPGTLETVDPNTPGQP 635
Query: 642 SLDAIA-----THINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR----SVL-- 690
L IA TH + SP+ S + SP I + KR + R SVL
Sbjct: 636 VLRRIALDRDRTHHDVQQ---SPISSASERFQSPIAASGI-AKKRLFPETRVTGQSVLRV 691
Query: 691 ---VERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAE---TG-I 743
V +N + ++ + L + + P Q++ S + G ET A TG +
Sbjct: 692 GQSVLSSNRGMLIDNQRILLVDQVAVSRTPGTQASNNSTIQAIQGTNRETTARPRRTGSV 751
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
+FF K LA VR+ + L++S ++ ++ +F+ + +RT L +RH+DQI++C
Sbjct: 752 ALFFRKFYNLACVRMQDLCNSLEISDTDKKKIWTIFEYSIKERTELMKDRHLDQILMCAI 811
Query: 804 YGVAKISQLNL-TFREIIYNYRKQPQCKPQVFRSVFV-------DWASARQSGRSE---- 851
Y + K+ ++ +F EI+ YR QPQ + ++RSV + D ++ + R E
Sbjct: 812 YVICKLVKMEKNSFTEIMRCYRLQPQAESHIYRSVLIKKITNDADSTASSNNERPEDNSN 871
Query: 852 ----------------------QDHVDIITFYNKIFVPAVKPLLVELGPA-GTAM 883
++ D+I FYN ++VP VK + G A G M
Sbjct: 872 LVENITPPTPTNMAGTSQNFDGEERGDLIKFYNTVYVPQVKEYANKFGSARGNVM 926
>gi|313225294|emb|CBY06768.1| unnamed protein product [Oikopleura dioica]
Length = 888
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 199/868 (22%), Positives = 360/868 (41%), Gaps = 147/868 (16%)
Query: 88 SEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRL 147
S NG+ + N N +L +L + ++++DF ++ ++ L + A
Sbjct: 70 SSMNGKEI----NGNCISLMSLLDEIGISLIDFMTKIKRW--SEMAQLGETFDA------ 117
Query: 148 EAKELQANFVHLSILSKSYKRIYRE---FFLPSDANGDKQSAAASTSGYISDYHRFGWLL 204
+ +L+ NF ++++ K + I+R+ F + A ++ S F WLL
Sbjct: 118 KILQLEKNFSVVTVIFKKFAPIFRKGDVFRINCIATPGRRKGKRPISH--EQLKEFTWLL 175
Query: 205 FLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKG----V 260
F+ + H DLV + L+S + + +V ++ N + +V + V
Sbjct: 176 FIHTKSHFPKVAGDLVNAYHLLLSCINFVFRNVYLQV-NLKGYVKEAYVPEDENNMSFDV 234
Query: 261 DLIASLCSIYDTSEDDLRKI----MEKTNTLIADILKKKPCEASECKSENLENIDTDGLI 316
++ LC + D + I E + + K + + + E + N DG+
Sbjct: 235 SILEKLCERHQGLVTDAQCINAHWFEPHIIQLFNQDKFAFHNSDQQRGEEIMNGAFDGMS 294
Query: 317 YFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN-EDDSLLGSGSLSGGAVNITG 375
Y N+ + ++ S +L +G+ DE VF+ + DS LG+ ++N
Sbjct: 295 YETNVRELKNMYSEFVLL----------RGDFDETVFLKPQADSCLGTPIKGNLSLN--- 341
Query: 376 AKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVIC 435
+ +S +S + +PL+ R N V +PV+ + ++ ++
Sbjct: 342 ENQNVESTSSMTFGLKTPLTNRRYLTKIQN----------VASPVTQHTRAVQQIKDLVK 391
Query: 436 PLPSKP-SAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDN 494
S A L L SC+KD +H I + + SS + +TG D
Sbjct: 392 DNDSSDIPASLMSLLASCEKD-------HSHSIRDLVSTSSNIILEKLTGK------RDK 438
Query: 495 IWAEQRRLEALKLYYRVLEAMCTAEA-QVLHAKNLTSLLTNERFHRCMLACSAELVLATH 553
AE+ + KL++R LE++ E +V + + LL +LA S E+ L ++
Sbjct: 439 SLAERMEISK-KLFWRFLESILLEERDRVGQLSDFSFLLEKPIVINSILALSVEITLWSY 497
Query: 554 KTVTMLFPAVLERTGITAFDLSKVIESFIRHEES----LPRELRRHLNSLEERLLESMVW 609
+ F +L+ I + KVIE +R + LPR++ +HL +EER+LE + W
Sbjct: 498 SSHDN-FQNILKTLNIVPIEFYKVIELILRADLGSGLRLPRDVVKHLAFIEERILEELSW 556
Query: 610 EKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETS 669
+ S ++ + DP+P+ + + N +SP +
Sbjct: 557 DNKSPLWKN------------------EDPVPTCADVTSRRNARELPISPAQPI------ 592
Query: 670 PGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRP 729
P R++F SP+K ++K K +
Sbjct: 593 ------------PL---------RHSFASPIK------ASVKRKLFDDGDEKDAVENMVD 625
Query: 730 NPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSL 789
+ + +F+ KI L RI + +RL+LS+ I E ++ +F+ L ++ +
Sbjct: 626 KVVDAKNVSKKGSMQLFYRKIYLLVTRRIQHISQRLRLSKNITEYIFTVFEHCLTKKREI 685
Query: 790 FFNRHIDQIILCCFYGVAKIS--QLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS 847
F +RH+DQIILCC Y V KI+ + + F EI+ YR QPQCK +V+RSV SA+ S
Sbjct: 686 FLDRHVDQIILCCVYIVGKIANPRDGIKFMEILSAYRYQPQCKSRVYRSVRTASTSAKCS 745
Query: 848 GRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSV 907
R DI FYN +F P V EL V + N P P
Sbjct: 746 ERG-----DITKFYNAVFAPLVGTFSTEL-----------VRQAGFNAGVPLSPLP---- 785
Query: 908 FPALPDMSPKKVSATHNVYVSPLRTSKM 935
+ + SP+++S+ H++++SP + ++
Sbjct: 786 ---MSNFSPRRLSSKHSIFISPAKCKRI 810
>gi|427785401|gb|JAA58152.1| Putative rb retinoblastoma tumor suppressor-related protein
[Rhipicephalus pulchellus]
Length = 998
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 182/806 (22%), Positives = 343/806 (42%), Gaps = 113/806 (14%)
Query: 74 RFWFAFVLYLVRRLSEKNGENLQQGS--NDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
R W A LY+ R N + Q S N +L +L + +++++DFF ++ ++
Sbjct: 50 RHWIACALYVECR--NGNVPTVAQTSRIEGNCVSLTRLLSICRISLLDFFTKMKKW---- 103
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAA--- 188
+++ + R + ++ +F + + + Y +I+ F ++S A
Sbjct: 104 ----ADMANLNERMRQRIETIEKSFCVTAKIYEKYVQIFTSVFKEHQTTAQRRSIKAVKR 159
Query: 189 ----STSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNF 244
T +D F W L++ ++ + DLV C + L+ +
Sbjct: 160 RVHRPTQCSSNDMFHFIWTLYVYIKGRFSAICCDLVNCYHLLLCCI-------------- 205
Query: 245 NIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNT-LIADILKKKPC---EAS 300
D + K DL+ Y+ +D L+K + + +I +++K +AS
Sbjct: 206 ---DYGYCAALAAKRTDLLDP--KFYEAQQDKLKKDSDNQDVGIIRELVKSHDGNFEDAS 260
Query: 301 ECKSENL---------ENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDER 351
K+ + E I + +D + +S+ L K Y+ +GELDER
Sbjct: 261 VLKAHHFRHPIQQLMEEKILHGDMKTLALCLDPVAFDTSIKKLNKTYEEGVLKEGELDER 320
Query: 352 VFINED-DSLLGSGSLSGGAVNITGAKRKFDSLASPVKT--ITSPLSPHRSSASHPNGIA 408
+F++E+ +G+ + +V + D++ V+ + +PL+ RS+ + I
Sbjct: 321 IFLDENAQDRIGTPRHTLDSVQRELRMCQADTVVKLVEVPQLLTPLTG-RSNLHNREAIN 379
Query: 409 GGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIIL 468
+PVSTA A L+ ++ + PS EL+ + D + V+ +
Sbjct: 380 R--------SPVSTATQCASKLQALLAGCKNAPSKELQALFSTLDPSLEASVLETVKSMG 431
Query: 469 EAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEA-QVLHAKN 527
+A + GS + MD +A +R L+Y+ LE + E Q +
Sbjct: 432 DAFCTAYAQPASDQRGS---SAHMD--FARKRLQLGETLFYKALENIVNIEVKQKRPNTD 486
Query: 528 LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEES 587
L + L++ F + + AC E+V+ + + FP +LE + ++ K+IE IR EE
Sbjct: 487 LAAHLSHSIFQQSLFACCLEIVMFCYNS-QRDFPWILEVFNLMPYNFYKIIEPLIRAEEG 545
Query: 588 LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLD--- 644
L RE+ +HLN +EE++LE + W+ S +++++ + P+P+
Sbjct: 546 LWREVVKHLNHIEEQILECLSWKDDSPLWDAIEHSE--------------QPVPTCKEVL 591
Query: 645 ---AIATHINFSSGGLSPVHSLHKHETSPGQNGDI-------RSPKRPCTDYRSVLVERN 694
I T + H+ H G GD ++ + CT R V V+
Sbjct: 592 LQRQIETFQEADGNDIGEPHTPVAHLPLKGLRGDQDVSLSNRKAVQAGCTT-RYVTVDSK 650
Query: 695 NFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLA 754
+ +P D ++P + SA P P G + +FF K+ LA
Sbjct: 651 SAAAPASD--------GTRPNIVTVTSAPEIPKENKPLRSG------SLALFFRKVYHLA 696
Query: 755 AVRINAMVERLQLSQQ-IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLN 813
VR + RL + Q+ I+ ++ F+ + L +RH+DQ+ILC Y + K++++
Sbjct: 697 GVRFQDLCARLGILQKDIQLKIWTCFEHSIVCHIDLMRDRHLDQLILCAVYVITKVTRVE 756
Query: 814 LTFREIIYNYRKQPQCKPQVFRSVFV 839
+F+EI++ YR+QPQ K V+RSV +
Sbjct: 757 KSFQEILHCYRQQPQNKSHVYRSVLL 782
>gi|196011866|ref|XP_002115796.1| hypothetical protein TRIADDRAFT_59859 [Trichoplax adhaerens]
gi|190581572|gb|EDV21648.1| hypothetical protein TRIADDRAFT_59859 [Trichoplax adhaerens]
Length = 960
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 195/862 (22%), Positives = 366/862 (42%), Gaps = 123/862 (14%)
Query: 17 NAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFW 76
N D+ + +LC + L++D++T + + +++ K + GN + W
Sbjct: 7 NPPDDRPIRSEYDELCLS-LNMDKDTAQTAWQRYQDIK----LKFTLEGNHL------HW 55
Query: 77 FAFVLYLVRRLSE--KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
L++ + S GE +Q G N +L +++ L++++FF ++ +++
Sbjct: 56 LTCALFVAGKQSRLPTVGEGIQVG---NCISLSRLIKAANLSLIEFFNKIDKWI------ 106
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKS-YKRIYREFFLPSDANGDKQSAAASTSGY 193
++ D + R + ++ NF +S++ K+ ++ I++ F S+ N D
Sbjct: 107 --DMACLDEDFRGQINVIERNFEVVSVIYKNKFEPIFQHLF-QSNVN-DSVPRRKLRHSK 162
Query: 194 ISDYHR---FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFR----NFNI 246
I Y + + W L+L ++ DLV + L+ + ++ ++ V R N +
Sbjct: 163 ICTYQQVFSYCWSLYLLIKGKYPDIRTDLVNSYHLLLCCIDLIYANIVVANRRDLLNPQL 222
Query: 247 HDSSRFVKKSNKG-VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE 305
+ +SN V +I LC Y+ +++ I + L + L K K+
Sbjct: 223 ESDALVESESNSSPVSVIEYLCKRYEGISIEVKAIKQHLLWLYLENLFDKNHLRGNKKT- 281
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL-LGSG 364
F L+D + + + YD + G+ DER+F+ + L +G+
Sbjct: 282 ------------FCGLLDQGNFDYNNKFVSNSYDEFVLSSGDFDERIFLGSNAYLDIGTP 329
Query: 365 SLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAM 424
+ A + T R+ + + S + P P K TPVS+A
Sbjct: 330 AKLPKAAHTTAEARQNVTRNLQDRFQNSTMIPQT-----PLTGRNFLNQKEERTPVSSAT 384
Query: 425 TTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTG 484
+ L+ ++ PS +L C D+ + R + + E + S
Sbjct: 385 LSVGRLQALLAKWTVSPSNKLLAIFGDCSNDLLDIIQSRINELKETFYDSY-----TKID 439
Query: 485 SLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS-----LLTNERFHR 539
+ + +D +AE R +KLYY+ LE++ AE + +N TS LL + FHR
Sbjct: 440 DERSKSPID--FAENRWNLGIKLYYKTLESIILAEKR----RNKTSGELKILLEKDVFHR 493
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
+LAC E+ + ++ + FP +++ G++ + KVIE IR E LPRE+ +HLN +
Sbjct: 494 SLLACCLEITIFSYGS-QKTFPWIVQVFGLSHYYFYKVIEIVIRTEHGLPREVVKHLNYI 552
Query: 600 EERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSP 659
EE +L+ + W GS P+ +A N GL+A +PS + + N P
Sbjct: 553 EESILDHLAWVSGS----------PLFTASDN--GLIA--IPSYEEVCIPSNEEGHSNKP 598
Query: 660 -----VHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKP 714
VH +P G I S P + ER ++SP+K + + +K
Sbjct: 599 AITNIVHP-QMRRLNPALAGPIESKGFP-------VAER--YSSPMKKSIEARSITDAKD 648
Query: 715 LPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRES 774
P ++ + +FF K LA+VR+ + L L + +
Sbjct: 649 TSKPKRTG-------------------SLGLFFRKFYYLASVRLKDLCRSLHLGEDLTSK 689
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ + L +RH+DQ+++C Y + K+S+ N F EI Y +QPQ K ++
Sbjct: 690 IWTCFEYSVMHCHELIIDRHLDQLLMCAIYVICKVSRKNTKFLEIKDCYNRQPQAKKHLY 749
Query: 835 RSVFVDWASARQSGRSEQDHVD 856
R+V V ++ G+S+ V+
Sbjct: 750 RNVLV----RKRKGKSDNKSVE 767
>gi|170571751|ref|XP_001891849.1| Retinoblastoma-associated protein A domain containing protein
[Brugia malayi]
gi|158603413|gb|EDP39348.1| Retinoblastoma-associated protein A domain containing protein
[Brugia malayi]
Length = 924
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 208/876 (23%), Positives = 363/876 (41%), Gaps = 187/876 (21%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL-VKSGPI 134
W+A +YL S G +L + + +++L +L++ KL++++FF + +++ + +GP
Sbjct: 73 WYACAVYL----SMWQG-SLLENAVPKKYSLAKLLKICKLSVLEFFDKXTKWVEMINGP- 126
Query: 135 LSNIYGADWENRLE--AKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSG 192
RL+ +Q++ +++ K I+R+ F P +N D+
Sbjct: 127 ----------RRLKDHISRVQSSLAVSAVVFKKLLPIFRKIFAPPYSNDDEDDVKGLNCK 176
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRF 252
+ W LF+ +R +F ++ L++ +L+ V F++ + +
Sbjct: 177 KL---FSLLWTLFIVMR----KQFN-----SDDLMNSFHLLLCTVDFIFQDLRRSEMTCL 224
Query: 253 --------VKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKS 304
V ++ ++ +LC I++ D + +T+ + +++ E +
Sbjct: 225 LDGDFINAVDIQHEEDSILETLCQIFEGVVLDAKHF--RTHCWLPK-MRRMSEEKTIETG 281
Query: 305 ENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSG 364
E+L N + I + L+ Y+ +GE+DER+F+ D S++
Sbjct: 282 EDLTNFAANEFI-------------NKKKLDSIYEELIVKRGEMDERMFLPADISIVFDE 328
Query: 365 SLSGGAVNITGAKRKFDSLASP-------VKTITSPLSPHRSSAS--HPNGIAGGATSKM 415
+ AV D+L ++ L R + G A
Sbjct: 329 AYDECAVQRLRRSEDGDNLVDADMLLRISTQSCLERLQDQRQQRTPLSGRGYVISAEQYC 388
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
TPVS ++ A L ++ + AE+E L +D +M +I+ S
Sbjct: 389 PATPVSASLYNASKLEALLQDNWRRLDAEVESILCHSCQDPFEKIM---NIV-------S 438
Query: 476 GLGERCVT-----GSLQGANLMDNIWAEQRRLEALK------LYYRVLEAMCTAEAQVLH 524
L ER G L GA A R++ A++ L++R L + +E L
Sbjct: 439 QLSERLEEVIENEGRLDGAGYD----ASFRQMFAVRKNNTESLFFRFLHKIAFSERDRLG 494
Query: 525 AKN---LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESF 581
+ + L+++L E F + + C+ +LVL T+++V FP LE + A KVIE
Sbjct: 495 SGSIVKLSAVLLREDFLKALYVCALQLVLFTYESVRE-FPWSLEIMRLPAIHFYKVIELI 553
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMP 641
IR + SL RE+ +HLN +EER+LE W S ++ SL D +P
Sbjct: 554 IRADSSLSREMVKHLNKVEERVLEEFAWSLDSPLWPSLHRR--------------TDGVP 599
Query: 642 SLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVK 701
S A++ ET G S ++P R L + P+
Sbjct: 600 SSQAVSL------------------ETLEGY-----SVRQPSLSQRYTL----SPVKPLA 632
Query: 702 DRLLGLNNLKSKPLPPPLQSAFASPTR-PNPGGGGETCAETGINIFFCKINKLAAVRINA 760
R L ++ S S A+ R P+ T A +FF K A VR+
Sbjct: 633 KRRLEFDDDDS--------SCIAAKRRVPDAENSTPTSATL---LFFRK----APVRLRD 677
Query: 761 MVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREII 820
+ ER++L ++ R+ + LF+ +L TSL RH+DQ ++CC Y VAKI Q N++F +I+
Sbjct: 678 LCERVRLDEKGRQRAWTLFEHVLRTETSLMAGRHLDQNLMCCLYVVAKIGQQNISFHDIM 737
Query: 821 YNYRKQPQCKPQVFRSVFV-----------DWASARQSG-------RSEQ---------- 852
Y+YR QPQ +V+R V V D AS G RSE
Sbjct: 738 YHYRHQPQATSRVYRRVLVENTSSPPIILDDGASHDSVGSASGDKFRSESSVSGAVTGSG 797
Query: 853 ---------DHVDIITFYNKIFVPAVKPLLVELGPA 879
+++D+I +YN IF+ VK + +L P
Sbjct: 798 TATPEHQNVEYIDLIKYYNHIFIAHVKSFVQKLQPG 833
>gi|91086521|ref|XP_971815.1| PREDICTED: similar to Retinoblastoma-like protein 1 (107 kDa
retinoblastoma-associated protein) (p107) (PRB1)
[Tribolium castaneum]
Length = 940
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 203/912 (22%), Positives = 383/912 (41%), Gaps = 113/912 (12%)
Query: 96 QQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQAN 155
Q + N NL ++LR L+I FF ++ Q+ S++ E + + L+ +
Sbjct: 70 QNSVHTNCVNLTNLLRHCNLSIAQFFYKIKQW--------SDMASMPEEFKKRIEYLEGS 121
Query: 156 FVHLSILSKSYKRIYREFF----------LPSDANGDKQSAAASTSGYISDYHRFGWLLF 205
F + K Y+ ++ + F L + + ++++ +S F W LF
Sbjct: 122 FSVAYNVFKEYQPLFMQIFKAPKAPEAHELDTSKHRNRKNKPVPSSPL--KVFEFCWTLF 179
Query: 206 LALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIAS 265
+ ++ + DLVT + L++I F++ D + G+ +
Sbjct: 180 ITIKSEDTNYNNDLVTSCHLLIAICDWA-------FKHALQADRKDLLNPDFAGLPEDFA 232
Query: 266 LCSIYDTSEDD-LRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFE--NLM 322
S SE + ++ + +I D+ K + + K +D LI + +++
Sbjct: 233 QPSYVPPSEAPCIVSLLCPSPNIITDL---KYVKEYQFKKSIRNYLDQGVLIENDQGDVL 289
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS--LLGSGSLSGGAVNITGAKRKF 380
D S + + Y+ NK + DER+F+ E L+ S++ A + +
Sbjct: 290 DTSVFDHNYKSIGNVYEKNILNKSDFDERIFLAEYKRKLLVRDQSVAQNAADNASPELST 349
Query: 381 DSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSK 440
+ + +T PL+ + G TP+ TA + L ++
Sbjct: 350 KEMVVSKECLT-PLTGRK---------YLGPKESQESTPLVTATESISRLNNLLHGRQPA 399
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR 500
PS L + +SC ++ T R I+ + LGER + G + +D QR
Sbjct: 400 PSEALVQLFESCARNPTE---RINQIV-------TNLGERFLEG-----HPVDQREVAQR 444
Query: 501 RLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML 559
RL+ A L+Y+ +E++ E + HA +L++++ + F+ CM AC E+V+ ++ +
Sbjct: 445 RLQLATTLFYKFIESILQNERSI-HA-DLSAIVEKDVFYECMFACCLEIVIYSYNS-RQR 501
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FP +L+ I ++ KVIE IR + L R+ +HLN +EE +L S+VW+ S ++ ++
Sbjct: 502 FPWILKALQIQPYNFVKVIELIIRSRDKLSRDTIKHLNMIEETILSSLVWKSDSLIWEAI 561
Query: 620 TVA-RPVLSAEINRLGLLADPMPSLDAIATHINFSSGG---LSPVHSLHKHETSP-GQNG 674
T + R V E L PS + + +S +SP S SP +
Sbjct: 562 TSSDREVPKFEETALPGHMQNEPSSENLTLRSILNSEPRQIVSPGPSATDRFQSPVAHSS 621
Query: 675 DIRSPKRPCTDYRSVLVERNNFTSPVKDR------LLGLNNLKSKPLPPPLQSAFASPTR 728
+ P L++ + +KDR + +N+ K P P+Q +P R
Sbjct: 622 AVNRELFPTVQSGQSLLQTTHLM--IKDRTGNTRMIPIVNSETQKSTPVPVQQ--TTPQR 677
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQ-R 786
G++I F K L+ R+ + L+++ + ++ +F++++ +
Sbjct: 678 QENVAQARPRRTGGVSIVFRKFYNLSGERMEHLCTHLKITNTDTKRKIWTVFEELVRKNH 737
Query: 787 TSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA-- 844
L +R++DQ+++C Y + K+++LN F EII +YR QPQ ++R+V +
Sbjct: 738 CELMKDRNLDQLLMCAVYMICKLTKLNKNFTEIIKSYRSQPQATSDIYRNVLISSKKVVV 797
Query: 845 --RQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGS 902
++ ++ D+I FYNK+ + A+K + G N G S
Sbjct: 798 VDGETTEIPEEWGDLIQFYNKVIIQAMKKFAQKFVVRG------------EENIGDILLS 845
Query: 903 PKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSK 962
P LP + V N+++ PL + + Y++ +SPSK
Sbjct: 846 P-------LPASRGQVVQVFDNIFIKPLESPTLTFGNGKVLNYYFS---------RSPSK 889
Query: 963 DLTDINHRLNSN 974
DL DIN + N
Sbjct: 890 DLKDINKAIRGN 901
>gi|7677391|gb|AAF67147.1| retinoblastoma 1 protein [Canis lupus familiaris]
Length = 518
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 231/513 (45%), Gaps = 118/513 (23%)
Query: 440 KPSAELERFLKSCDKDVTTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNI 495
+PS L + +C + +++R I + F + +G+ C+ GS
Sbjct: 12 QPSENLISYFNNCTVNPKESILKRVKDVGYIFKEKF-AKAVGQGCMEIGS---------- 60
Query: 496 WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT 555
QR ++LYYRV+E+M +E + L +N + LL ++ FH +LAC+ E+V+AT+
Sbjct: 61 ---QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALEVVMATYSR 117
Query: 556 VT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 606
T + FP +L + AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 118 STSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMES 177
Query: 607 MVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKH 666
+ W S +++ + A+ +R G P L++ T +N P+ S H
Sbjct: 178 LAWLSDSPLFDLIKQAK-------DREG----PADHLESACT-LNL------PLQS--NH 217
Query: 667 ETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASP 726
+ +RSPK+ + R S V + +++ PL+S
Sbjct: 218 TAADMYLSPVRSPKKKGSTIR--------VNSTVNTEAQATSAFQTQ---KPLKS----- 261
Query: 727 TRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILN 784
T +++F+ K +LA +R+N + RL LS ++ ++ LFQ L
Sbjct: 262 --------------TSLSLFYKKEYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQ 306
Query: 785 QRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA 844
L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P + F+ V +
Sbjct: 307 NEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----- 361
Query: 845 RQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPK 904
E+++ II FYN +F+ +K +++ P
Sbjct: 362 -----REEEYDSIIVFYNSVFMQRLKTNILQYAST---------------------RPPT 395
Query: 905 VSVFPALPDMSPKKVSAT------HNVYVSPLR 931
+S P +P SP K S++ N+Y+SPL+
Sbjct: 396 LSPIPHIPR-SPYKFSSSPLRIPGGNIYISPLK 427
>gi|444732064|gb|ELW72387.1| Retinoblastoma-associated protein, partial [Tupaia chinensis]
Length = 754
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 220/499 (44%), Gaps = 119/499 (23%)
Query: 470 AIFPSSGLGERCVTGS----LQGANLMDNIWAE---------------QRRLEALKLYYR 510
I SSGL E C L+ ++ I+ E QR ++LYYR
Sbjct: 222 GIVASSGLPENCTVNPKESILKRVKDVEYIFKEKFAKAVGQGCIEIGSQRYKLGVRLYYR 281
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFP 561
V+E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP
Sbjct: 282 VMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYNRTTSQNIDSGTDLSFP 341
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
+L + AFD KVIESFI+ E +L R++ +HL E R++ES+ W S +++ +
Sbjct: 342 WILNVLNLKAFDFYKVIESFIKAEANLTRDMIKHLERCEHRIMESLAWLSDSPLFDLIKQ 401
Query: 622 ARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKR 681
++ +R G P +A A +N L H+ SP +RSPK+
Sbjct: 402 SK-------DREG----PSDHFEA-ACSLNLP---LQNNHTAADMYLSP-----VRSPKK 441
Query: 682 PCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAET 741
+ R + +P SAF + + T
Sbjct: 442 KGSTPRVSSTANSETQAP---------------------SAFQT---------QKPLKST 471
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQII 799
+++F+ K+ +LA +R+N + RL LS ++ ++ LFQ L L +RH+DQI+
Sbjct: 472 SLSLFYKKVYRLAYLRLNTLCARL-LSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIM 530
Query: 800 LCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
+C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 531 MCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIV 580
Query: 860 FYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV 919
FYN +F+ +K +++ P +S P +P SP K
Sbjct: 581 FYNSVFMQRLKTNILQYAST---------------------RPPTLSPIPHIP-RSPYKF 618
Query: 920 SAT------HNVYVSPLRT 932
S++ N+Y+SPL++
Sbjct: 619 SSSPLRIPGGNIYISPLKS 637
>gi|288551674|gb|ADC53307.1| retinoblastoma protein [Zalophus californianus]
Length = 416
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 225/511 (44%), Gaps = 116/511 (22%)
Query: 440 KPSAELERFLKSCDKDVTTDVMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNI 495
+PS L + +C + +++R I + F + +G+ C+ GS
Sbjct: 2 QPSENLISYFNNCTVNPKESILKRVKDVGYIFKEKF-AKAVGQGCMEIGS---------- 50
Query: 496 WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT 555
QR ++LYYRV+E+M +E + L +N + LL + FH +LAC+ E+V+AT+
Sbjct: 51 ---QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSR 107
Query: 556 VT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 606
T + FP +L + AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 108 STSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMES 167
Query: 607 MVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKH 666
+ W S +++ + A+ +R G A H+ + P+ S H
Sbjct: 168 LAWLSDSPLFDLIKQAK-------DREG-----------PADHLESACALNLPLQS--NH 207
Query: 667 ETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASP 726
+ +RSPK+ + R N T+ + + SAF +
Sbjct: 208 TAADMYLSPVRSPKKKGSTIRV------NSTANTEAQ---------------ASSAFQT- 245
Query: 727 TRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQ 785
+ T +++F+ K+ +LA +R+N + RL ++ ++ LFQ L
Sbjct: 246 --------QKPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQN 297
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR 845
L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P + F+ V +
Sbjct: 298 EYELMKDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI------ 351
Query: 846 QSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKV 905
E+++ II FYN +F+ +K +++ P +
Sbjct: 352 ----REEEYDSIIVFYNSVFMQRLKTNILQYAST---------------------RPPTL 386
Query: 906 SVFPALPDMSPKKVSAT------HNVYVSPL 930
S P +P SP K S++ N+Y+SPL
Sbjct: 387 SPIPHIPR-SPYKFSSSPLRIPRGNIYISPL 416
>gi|345490211|ref|XP_001604637.2| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 1002
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 219/947 (23%), Positives = 391/947 (41%), Gaps = 173/947 (18%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETK-HLLLANISAIGNGMPEEAERFWFAFV 80
DAT + DLC+ L++D + E K + + H L E + W
Sbjct: 9 DATFMKHQDLCQK-LNMDASAASEAWKSYENIRQHYTL-----------EGDQLHWIGCA 56
Query: 81 LYLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPIL 135
LY R + K G N+Q N + +LR+ L +++FF + K+ +
Sbjct: 57 LYAACRKATTPTVGKTGANIQ----GNCVSFTRLLRLCNLPLIEFFTK-----SKAWADM 107
Query: 136 SNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGD-----KQSAAAS 189
N+ D+ R++ LQ NF S++ + Y+ I+++ F P+D G + A
Sbjct: 108 CNM-PQDFGARIDT--LQRNFSVSSVIFQKYQPIFKDIFKNPADDLGKPLRSRRHKAVPC 164
Query: 190 TSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS 249
T S F W LF+ ++ + ++ LV+ +L++ + + N + +
Sbjct: 165 TP---SRLFEFCWSLFICIK-------SKISAISDDLVNSYHLLLVCCDLMYSNALLANG 214
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK---PCEASECKSEN 306
+ G+ + D+ E N +++ + ++ EA+ K +
Sbjct: 215 KELLNPDFPGLP---------ENFSDENYTPPETANCIVSLLCERYNAIAVEANTIKEYS 265
Query: 307 LENIDTDGLIYFENLM--DDSSLSSSLNILEKDYDNATRNK---------GELDERVFIN 355
L+ ++ E ++ D S+ S L L D +N NK G+LDER+F+
Sbjct: 266 LKPYLRK--LFNERVLRGDPSNYSGILEALNFDGNNKAINKAYEQHVLSVGDLDERIFLG 323
Query: 356 EDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAG----GA 411
D S GS +N+T +F S + T+ + P + G A
Sbjct: 324 PD-SNSNIGSSPSKMINMTDLHEQFQSKKEQLGTM--------QHWAPPTPLTGRKYLKA 374
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR----AHII 467
P + + L++++ + PS +L K+ D+ T V + +
Sbjct: 375 KDVTNTAPNANPTQSVIRLQSLLVGCQALPSEKLLEMFKNRSPDIQTFVDSKIQDFGKMF 434
Query: 468 LEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKN 527
EA P VT + N +D + ++R A L+Y+VLE + E +
Sbjct: 435 CEAYSPK-------VTEQAEN-NCID--YGKKRLQSAQTLFYKVLELVLNDEMSKKPNFD 484
Query: 528 LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHE-E 586
+T LL N F +C+ AC E+VL ++ FP +L+ I A+ KVIE ++ +
Sbjct: 485 VTILLKNHDFLQCLFACCCEIVLYSYHYKERTFPWILKALNIEAYLFYKVIEVIVKVAVD 544
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT-VARPVLSAEINRLGL---LADPMPS 642
L R++ +HLN +EE +LES+ W+ GS ++ +L V S E L L DP
Sbjct: 545 QLTRDMVKHLNRIEEMILESLAWKSGSPLWRALKDCDEGVPSYEDVALPGTFDLVDPNAP 604
Query: 643 LDAIATHINFSSGGL------SPVHSLHKHETSPGQNGDIRSPKRPCTDYR--------- 687
+ I+ G SP+ S + SP +G + KR +D +
Sbjct: 605 GQPVLRRIHIDRGAAHHDVVQSPISSASERFQSPIPSG--LAKKRLFSDTKPGGAQSVLK 662
Query: 688 ----SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGI 743
S+L + ++P ++ G+ + S P+ A + + P G +
Sbjct: 663 AGGQSLLSRLTDQSNPTRN---GVGPVSSTPI------ATVNRDQSKPRRTG------SL 707
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+FF K L R+ + + L+++ ++ ++ +F+ + +RT L +RH+DQI++
Sbjct: 708 ALFFRKFYNLTITRMQNLCQSLEITDIDLKRKIWTIFEYSVKERTHLMKDRHLDQILMSA 767
Query: 803 FYGVAKISQLNL-TFREIIYNYRKQPQCKPQVFRSVFV---------------------- 839
Y + K+ ++ TF EI+ YR QPQ + ++RSV +
Sbjct: 768 VYVICKVGKIGKNTFTEIMRCYRFQPQAESHIYRSVLISTNIDDNSEAALENGSNRNSQT 827
Query: 840 ---------DWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELG 877
D AS + SE+ D+I FYN ++VP VK +LG
Sbjct: 828 NNTCPPTPSDMASTSRIYGSEE-RGDLIKFYNTVYVPEVKDFAKKLG 873
>gi|74215550|dbj|BAE21400.1| unnamed protein product [Mus musculus]
Length = 549
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 228/540 (42%), Gaps = 139/540 (25%)
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR----AHIILEAIFPSSGLGE 479
M T + L ++ +PS L + +C + ++++R HI E ++ +G+
Sbjct: 1 MNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKF--ANAVGQ 58
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
CV +Q L ++LYYRV+E+M +E + L +N + LL + FH
Sbjct: 59 GCVDIGVQRYKL------------GVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHM 106
Query: 540 CMLACSAELVLATHKTVTML---------FPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+LAC+ E+V+AT+ T+ FP +L + AFD KVIESFI+ E +L R
Sbjct: 107 SLLACALEVVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKVEANLTR 166
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHI 650
E+ +HL E R++ES L L+D
Sbjct: 167 EMIKHLERCEHRIMES--------------------------LAWLSD------------ 188
Query: 651 NFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNL 710
SP+ L K ++ G+ D P P + L + N T+ ++
Sbjct: 189 -------SPLFDLIK-QSKDGEGPDNLEPACPLS-----LPLQGNHTAA---------DM 226
Query: 711 KSKPLPPPLQSAFASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRIN 759
PL P + S TR N ET A T + +F+ K+ +LA +R+N
Sbjct: 227 YLSPLRSPKKRT--STTRVNSAANTETQAASAFHTQKPLKSTSLALFYKKVYRLAYLRLN 284
Query: 760 AMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFRE 818
+ RL ++ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+
Sbjct: 285 TLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKI 344
Query: 819 IIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGP 878
I+ Y+ P + F+ V + E++ II FYN +F+ +K +++
Sbjct: 345 IVTAYKDLPHAAQETFKRVLI----------REEEFDSIIVFYNSVFMQRLKTNILQYAS 394
Query: 879 AGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLRT 932
P +S P +P SP K S++ N+Y+SPL++
Sbjct: 395 T---------------------RPPTLSPIPHIPR-SPYKFSSSPLRIPGGNIYISPLKS 432
>gi|303288323|ref|XP_003063450.1| retinoblastoma protein [Micromonas pusilla CCMP1545]
gi|226455282|gb|EEH52586.1| retinoblastoma protein [Micromonas pusilla CCMP1545]
Length = 1359
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 139/290 (47%), Gaps = 59/290 (20%)
Query: 731 PGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLF 790
PG G+ A + IFF K+ +L+A R+ + +RL L + + Y L + L TSL
Sbjct: 1024 PGAAGDVTARNSLRIFFAKVMRLSARRLADLCDRLSLPSSLTQQAYSLVEHALYDNTSLL 1083
Query: 791 FNRHIDQIILCCFYGVAKISQ------LNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA 844
+NRH+DQIILC YG K+++ + FR+IIY+Y+KQPQC+ +VF +V + +
Sbjct: 1084 YNRHLDQIILCAVYGTCKVNKDGALKGKTVPFRDIIYHYQKQPQCREEVFWTVVMSQSDP 1143
Query: 845 RQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVS--EVNHNNDGPCPGS 902
++ DII FYNK+FVPAVK L+ L P RVS E S
Sbjct: 1144 ELEVITQG---DIIAFYNKVFVPAVKQFLLSLKP------QARVSCHETQETAGADAATS 1194
Query: 903 PKVSV--FPALPDMSPKKVSAT---------HNVYVSPLR---TSKMD------------ 936
P S P K+++A NVYVSP+R ++ D
Sbjct: 1195 PPASSAQLPVGLQSPRKQLTAVGTGPAGVINRNVYVSPMRGGAAARADLHAGGSVGPSPS 1254
Query: 937 ----------------ALISHSSKSYYACVGESTHAYQSPSKDLTDINHR 970
++ SKS +A VGESTHAY SP++DL IN R
Sbjct: 1255 PGGVPYVGAPGTPLPLGAMTPGSKSLFAFVGESTHAYASPAQDLAFINQR 1304
Score = 103 bits (256), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 70/93 (75%)
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
SLL + RF R +L+C+AE+V+A++KT T+ FPA+ G+ AFD+S VIE F+R + ++P
Sbjct: 789 SLLGSSRFVRSVLSCAAEVVVASYKTATLKFPAIPTLLGLDAFDVSNVIEPFVRADATMP 848
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
RE+++H N++EE+++E M W +GS++ + + A
Sbjct: 849 REIKKHFNAIEEKIMEHMAWRRGSTLLSFMIAA 881
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 124/325 (38%), Gaps = 87/325 (26%)
Query: 32 CKNGLSVDENTYKEIIKLFRETKHLLL-ANISAIGNGMPEEAERFWFAFVLYLVRRLS-E 89
C + L D + ++ +++ E L+ N+ AI AFV VRR + E
Sbjct: 28 CASALGFDADAVEDAVEILMECAPTLVEKNVVAIDASFRPNEWHACAAFVAAGVRRAADE 87
Query: 90 KNGENLQQGS------------------NDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
+G + ++ + + ++ +L +L +N VDFF+ L +F++ +
Sbjct: 88 ADGGSAKKNASTRGAKKPPPSSPSSIEEDASKRSLTRVLTTFDVNCVDFFRALRKFMMAN 147
Query: 132 G-----------------------------------------PILSNIYGADWE------ 144
P N G D
Sbjct: 148 ATALHARVKRSSSAGAKGTSASASKSPRSAKSSSPMGSPMGSPNAKNARGVDGASNPAGE 207
Query: 145 --NRLEA----KELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYH 198
N+LEA EL+ +F ++++ YK FL D + D+ + + D
Sbjct: 208 GLNQLEADLSVSELRTSFAFTRVVAQKYK-----LFL--DLHFDRAAPGGA------DLA 254
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVR-FRNFNIHDSSRFVKKSN 257
R GW LFLA + +F DL + + LV + A ++++ P R R ++ S K ++
Sbjct: 255 RLGWSLFLAAKHAMLPKFPDLYSLYHLLVVVQAFVLVNAPPRLLRTSLVNMVSMSEKDAD 314
Query: 258 KGVDLIASLCSIYDTSEDDLRKIME 282
+D +ASL T D LR +++
Sbjct: 315 GKLDALASLSVSSKTKIDQLRDMLK 339
>gi|301611245|ref|XP_002935161.1| PREDICTED: retinoblastoma-associated protein-like [Xenopus
(Silurana) tropicalis]
Length = 875
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 147/579 (25%), Positives = 239/579 (41%), Gaps = 128/579 (22%)
Query: 423 AMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR----AHIILEAIFPSSGLG 478
AM T L + PS +L + +C + T V R H+ E +S +G
Sbjct: 329 AMNTIHQLTVTLNSASDNPSDKLNSYFNNCTVNPKTKVTERVEHFGHVFKEKF--ASSVG 386
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ C + L ++LYYRV+EA+ E + L N + LL N+ FH
Sbjct: 387 QACAEIGYKRYKL------------GVRLYYRVMEAILKTEEERLSVHNFSKLLNNDIFH 434
Query: 539 RCMLACSAELVLATHKTVT----------MLFPAVLERTGITAFDLSKVIESFIRHEESL 588
C+LAC+ E+V+ ++ T + FP +L I AFD KVIE FI+ E SL
Sbjct: 435 MCLLACAVEVVIDSYTRNTAQAYFSSRTNLSFPWILRVFEIKAFDFYKVIECFIKAEPSL 494
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADP--MPSLDAI 646
++ ++L E +++ES+ W+ S +++ + R R GL+ P + +L
Sbjct: 495 TSDMIKYLERCEHQIMESLAWQSDSPLFDLIRQTR-------EREGLVDHPELVSTLQQP 547
Query: 647 ATHINFSSGG--LSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRL 704
H N ++ LSP S H+ P T R+ V
Sbjct: 548 VQH-NHTAADLYLSPSRSSHQC---------------PVTSVRTSSVTNGQ--------- 582
Query: 705 LGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVER 764
SP++P T +++F+ K+ LA R++++
Sbjct: 583 -------------------VSPSQPVQQKS------TSLSLFYKKVYLLAYKRLSSLCSS 617
Query: 765 LQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNY 823
L ++ + ++ L Q L L +RH+DQI++C YG+ K ++L F+ I+ Y
Sbjct: 618 LLSDHPELEQVIWTLLQHTLQHEYELMRDRHLDQIMMCSMYGICKAKNIDLRFKTIVTAY 677
Query: 824 RKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAM 883
+ + F+ V + + H II FYN +F+ +K +++ G A
Sbjct: 678 KGLTNTNQETFKHVLI----------RDGQHDSIIVFYNLVFMQKLKSHILQYGSA---- 723
Query: 884 KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRT--SKMDALISH 941
H P P P+ P SPK N+YVSPL+T D L+S
Sbjct: 724 --------RHPTLSPIPHIPRS---PYRFGNSPK---VPGNIYVSPLKTPYKTTDGLLSP 769
Query: 942 S----SKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
S S+ +GE+ ++SP + IN LNS R
Sbjct: 770 SKMTPKTSFLISLGET---FRSPDR-FQKINQMLNSCER 804
>gi|348583631|ref|XP_003477576.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Cavia porcellus]
Length = 1142
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 158/629 (25%), Positives = 278/629 (44%), Gaps = 95/629 (15%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QLRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L ILR + ++++FF ++ K ++N+ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILRCSQQSLIEFFNKM-----KKWEDMANL-PPNF 145
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R E L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 146 RERTE--RLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALR----------------IHAFSRFKDLV--TCTNGLVSILAILIIHVPVRFR 242
W+LF+ + IHA F LV G+ + L + +++
Sbjct: 204 CWVLFIYAKGKKGXYLYINXDDLNSIHAILLFIFLVYYNLVYGVTTDLHFVTVYIIGLSE 263
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+F DS K S+ +I LCS++D + + I E I + +KK + E
Sbjct: 264 DFPTKDS----KPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE 319
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 320 ---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEE 365
Query: 361 ---------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
GSG+ S V + ++ FD S I++PL+ G+
Sbjct: 366 IGTLSRCLNTGSGTESAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYI 413
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTP+STA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 414 KENSPCVTPISTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYEI 473
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
S E GS + I ++ R + LYY+VLE++ E + L A +L+
Sbjct: 474 YSQHSQSDEEFSNGS-------NEISSKHFRFAEM-LYYKVLESIIEQEQRRLGATDLSG 525
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E++ ++K FP + E + + KVIE FIR E+ L R
Sbjct: 526 ILEQDAFHRSLLACCLEVITFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCR 584
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 585 EVVKHLNQIEEQILDHLAWKPESPLWDKI 613
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 49/267 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 836 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSMIQCPELMMDRHLDQLLM 895
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 896 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDNRSHQNSP 955
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
R+ +D ++ + + VP + P L A + M+ ++ +NN
Sbjct: 956 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1015
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K + L+S
Sbjct: 1016 IKQIKTFALKYSQANLMDAPPLSPYPFVKTGSPRRIQLSQNHPVYISP---HKNEMLLSP 1072
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDIN 968
K +Y + SPSK L +IN
Sbjct: 1073 REKIFY-------YFSNSPSKKLREIN 1092
>gi|449472780|ref|XP_002190620.2| PREDICTED: retinoblastoma-like protein 2 [Taeniopygia guttata]
Length = 1200
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 159/626 (25%), Positives = 279/626 (44%), Gaps = 95/626 (15%)
Query: 26 ARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVR 85
+R +LC++ L++DE E ++ + N + GN M W A LY+
Sbjct: 106 SRYEELCRS-LNMDERARAEAWLSYQSMRR----NYTLEGNDM------HWLACALYVAC 154
Query: 86 RLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
R K + +G+ + N +L ILR ++++FF ++ ++ ++ +
Sbjct: 155 R---KAIPTVSRGTAEGNYVSLTRILRCSDQSLIEFFNKMKKW--------EDMANLPSQ 203
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFF-LPSD--ANGDKQSAAASTSGYISDYHRFG 201
R + L+ NF +++ K Y+ I+++ F P + + +++ +F
Sbjct: 204 FRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRQPCTVTEVFQFC 263
Query: 202 WLLFLALRIHAFSRF----KDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIH 247
W+LF +HA F DLV + L+ L ++ + P R F+
Sbjct: 264 WVLF----VHAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNRKELLNPNFKGLPED 319
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSEN 306
S+ K S+ +I LCS++ + + I E I + KK + K EN
Sbjct: 320 FHSKDYKVSSDPPCIIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFDKKLLKG---KDEN 376
Query: 307 LENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLG--- 362
L +D + S+ + K Y+ + G LDER+F+ ED D +G
Sbjct: 377 LTG-----------FLDPGNFGDSVKAINKAYEEYVLSVGNLDERIFLGEDADEEIGTLT 425
Query: 363 ------SGSLSGGAVNIT-GAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKM 415
SG + V + ++ FD S ++T T+PL+ G S
Sbjct: 426 RCLNTPSGQETAERVQVKHNLQQHFDRSKS-LRT-TTPLT----------GRKYIKESNP 473
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
VTPVS A + L T++ L + PS LE+ L+SC +D + + R + +
Sbjct: 474 YVTPVSIATYSLSRLHTMLAGLKNAPSENLEQILRSCSRDPSQSIANRVKEMHDVY---- 529
Query: 476 GLGERCVTGSLQG--ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
C + +G +N ++ ++ R A LYY+VLE++ E + L +L+++L
Sbjct: 530 -----CQSTQSEGEFSNFSKDVASKHFR-RAEMLYYKVLESVIEQEKKRLGDTDLSAILE 583
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR +LAC E++ T+ FP V E I + KVIE FIR E+ L RE+
Sbjct: 584 QDVFHRSLLACCLEIITFTYNPPGN-FPFVTEIFDIPVYHFYKVIEVFIRAEDGLCREVV 642
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLN +EE++LESM W++ S +++ +
Sbjct: 643 KHLNHIEEQILESMAWKRESVLWDRI 668
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 127/291 (43%), Gaps = 55/291 (18%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +FF K+ LA+VR+ + +L +S ++R+ ++ F+ L + +RH+DQ+++C
Sbjct: 893 LALFFRKVYHLASVRLRDLCAKLDVSDELRKKIWTCFEYSLVHCPEIMMDRHLDQLLMCA 952
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV---------------------DW 841
Y + K++ + +F+ I+ YR QPQ K V+RSV + D
Sbjct: 953 IYVMTKVTNEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRHSGSSDSSSQQNSPTDR 1012
Query: 842 ASARQSGRSEQDHVDIITFYNKIFVP---AVKPLLVEL-GPAGTAMKTNRVSEVNHNND- 896
+ + RS +D ++ + + VP + P L GP + R + N+
Sbjct: 1013 SKDKNKERSSRDSSPVMRSSSTLPVPQPSSAPPTPTRLSGPNSDTEEEERGDLIQFYNNV 1072
Query: 897 --------------GPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALIS 940
SP +S +P + SP++V S H +Y+SP R ++ +S
Sbjct: 1073 YIEQIKDFALKYTSNAQTESPPLSPYPFVRLGSPRRVQLSQHHPLYISPHRN---ESALS 1129
Query: 941 HSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDDVDV 988
K +Y + SPSK L +IN + + + RG L D +
Sbjct: 1130 PQEKIFY-------YFSSSPSKRLKEINSMVRTGETPTKKRGILLEDGTEA 1173
>gi|301615832|ref|XP_002937369.1| PREDICTED: retinoblastoma-like protein 2-like [Xenopus (Silurana)
tropicalis]
Length = 1089
Score = 149 bits (377), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 153/629 (24%), Positives = 271/629 (43%), Gaps = 103/629 (16%)
Query: 26 ARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV- 84
R +LC + L++DE E + + N + GN + W A LY+
Sbjct: 20 CRYDELC-SSLNMDERARGEAWEYYSRISQ----NYTLEGNAL------HWLACSLYVAC 68
Query: 85 RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
R+ G +G N +L IL +L++++FF ++ ++ ++ E
Sbjct: 69 RQTVPTVGRGTVEG---NYVSLTQILSSSELSLIEFFNKIKKW--------EDMANLPTE 117
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYH 198
R K+L+ NF ++L K Y I++E F P G KQ T +S+ +
Sbjct: 118 FRTRTKKLERNFTVSAVLFKKYDPIFQEVFRSPLEEQPRQHRGRKQRRQPCT---VSEVY 174
Query: 199 RFGWLLFLALRIHAFSRF----KDLVTCTNGLVSILAILI---IHVPVR-------FRNF 244
+F W+LF IH F DLV + L+ L ++ + P R F+
Sbjct: 175 QFCWVLF----IHTKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNRRELLNPNFQGL 230
Query: 245 NIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECK 303
SR K + +I +LC ++D + + I E I + KK +
Sbjct: 231 PEDFCSREYKAPLEAPCIIETLCGLHDGLVLEAKGIKEHFWKPYIRKLFDKKILKGK--- 287
Query: 304 SENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGS 363
+D L+ F +D + + S+ + K Y+ + G LDERVF+ + + +G
Sbjct: 288 --------SDSLVGF---LDPGNFADSVKAINKAYEGYVLSAGNLDERVFMEDVEEEIGR 336
Query: 364 -GSLSGGAVNITGAKR------------KFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
G ++ + +R KF SL +++PL+ +
Sbjct: 337 IGQCLNPSLGMESVERAKVTYNLQQNFDKFKSL-----RVSTPLT----------SLKYI 381
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
TP+S+AM L T++ PS L + L+SC +D T ++RR + E
Sbjct: 382 RECSPCTTPISSAMYCVSRLFTILTGFKPAPSERLLQMLRSCSRDPTKTILRRLKEMSET 441
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ T S+ +I + RL + LYY+VLE++ E + L +++S
Sbjct: 442 FCEN--------TDSVAEKQFCRDITKKYFRLAEV-LYYKVLESVIDQEKKRLGDIDMSS 492
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +++C E+ + ++K FP+++ + + KVIE I+ EE L R
Sbjct: 493 ILEQDVFHRSLMSCCLEITVFSYKPPGN-FPSIIVMFELAPYQFYKVIEVVIKAEEGLCR 551
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN++EE++LE M W S +++ +
Sbjct: 552 EVVKHLNNIEEQILECMAWTHDSPLWDKI 580
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 709 NLKSKP------LPPPLQSAFASPTRPN-----------PGGGGETCAE---------TG 742
N+ S+P +PP A A P P P G+ + +
Sbjct: 725 NVSSQPHSVTSSVPPLTAQALAGPLNPQQIQGQVSVSQVPASPGQQSKQNLTSKLKKASS 784
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F ++ LA++R+ + +L +S ++R ++ F+ L L +RH+DQ+++C
Sbjct: 785 LTLFCRRVYCLASIRLKDLCLKLDISDELRRKIWTCFEFSLVHCPELIKDRHLDQLLMCA 844
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
Y + K+++ + +F I+ YR QP V+RSV + RQSG S DH+
Sbjct: 845 VYVITKVTKEDTSFHNIMKCYRVQPHASSHVYRSVLLKKRRRRQSGSS--DHI 895
>gi|344289259|ref|XP_003416362.1| PREDICTED: retinoblastoma-like protein 2 [Loxodonta africana]
Length = 1139
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 152/622 (24%), Positives = 276/622 (44%), Gaps = 83/622 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E + +R + + + GN + W A LY+
Sbjct: 45 TQLRFEELCGR-LNMDETARAEAWESYRR----MSESYTLEGNDL------HWLACALYV 93
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 94 ACR---KCVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 142
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHR 199
R + L+ NF +++ K Y+ I+R+ F P + +Q +S+ +
Sbjct: 143 PHFRERTERLERNFTVSAVIFKKYEPIFRDIFKYPQEEQPRQQRGRKQRRQPCTVSEVFQ 202
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W+LF+ + + DLV + L+ L ++ + P R F+ F+
Sbjct: 203 FCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNRKELVNPNFKGFSEDFH 262
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 263 GKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLT 319
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLG----- 362
++ + + + K Y+ + G LDER+F+ ED + +G
Sbjct: 320 G-----------FLEPGNFGDTFKAISKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRC 368
Query: 363 ----SGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
SG+ + V + ++ FD S +++PLS G+ S V
Sbjct: 369 LNTASGTETAERVQVKNILQQHFDK--SKALKVSTPLS----------GVRPIKESSPCV 416
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVSTA + L T++ L + PS +LER L++C +D T + R + E +
Sbjct: 417 TPVSTATHSLSRLHTMLTGLRNVPSEKLERILRTCSRDPTQAIANRLKEMYE-------I 469
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
+ +N I + R + LYY+VLE + E + L +L+ +L + F
Sbjct: 470 YSQHFQPDEDFSNCSKEIASRHFRFAEM-LYYKVLETVIEQEQKRLGDTDLSVILEQDAF 528
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
H+ +LAC E+V +++ FP + E + + KVIE F+R EE L RE+ +HLN
Sbjct: 529 HKSLLACCLEVVTFSYRPPGN-FPFITEIFDVPLYHFYKVIEVFVRAEEGLCREVVKHLN 587
Query: 598 SLEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ GS +++ +
Sbjct: 588 QIEEQILDHLAWKPGSPLWDRI 609
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 63/288 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAGVRLRDLCAKLDISNELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG
Sbjct: 894 CAIYVMAKVTKDDRSFQHIMRCYRTQPQARSQVYRSVLIKGKRRRNSGSSDSRSHQNSPT 953
Query: 849 -----RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTN-------------- 886
R+ +D ++ + + VP + P L A + M+
Sbjct: 954 ELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNSIYI 1013
Query: 887 --------RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMD 936
+ S+ N + +P +S +P + SP++V S H++YVSP K +
Sbjct: 1014 KQIKTFAIKYSQANTTD------APPLSPYPCIRTGSPRRVQLSQNHHIYVSP---RKNE 1064
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
L++ K +Y + SPSK L +IN + + + RG L
Sbjct: 1065 PLLTPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|351702519|gb|EHB05438.1| Retinoblastoma-like protein 1 [Heterocephalus glaber]
Length = 1066
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 160/626 (25%), Positives = 269/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEESAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G + +G N +L ILR KL+++ FF ++ +++ ++ E
Sbjct: 70 SIIPTVGRGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWM--------DMLNLPQEF 118
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHR 199
R + L+ NF +++ K ++ I+ + F LP KQ + + D
Sbjct: 119 RERIERLERNFEVSTVIFKKFEPIFLDIFQNPFEELPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E IA + +K + EC
Sbjct: 236 TADFRASEEPPCIIAILCELHDGLLIEAKGIKEHYFKPYIAKLFDRKVLKG-EC------ 288
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 289 ------------LLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSP------LSPH----RSSA-SHP-NGIAGGATSKMV 416
A G RKF +P+ +T+ L H RS A S P G + V
Sbjct: 326 -AEEEIGTPRKFTG-DTPLGKLTAQTNVECNLQQHFEKKRSFAPSTPLTGRGYLREKETV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L+T++ L + PS +L +SC ++ ++M+ G
Sbjct: 384 ITPVASATQSVSRLQTIVAGLKNAPSKQLTNIFESCMRNPMENIMKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + EA+ LH +++ LL
Sbjct: 434 IGETFCQRYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMAQEARRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWSHNSALWEAL 578
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 130/270 (48%), Gaps = 64/270 (23%)
Query: 741 TGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFF 791
TGIN +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L
Sbjct: 775 TGINKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMK 834
Query: 792 NRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV------------ 839
+RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 835 DRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREIVTYNN 894
Query: 840 -----------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAM 883
D A + SG +++ D+I FYN I+V VK A+
Sbjct: 895 DISDDFEMTDGDLEEATKTTDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------AL 945
Query: 884 KTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISH 941
K + +S +H D P P SP FP + SP+++S H++YVSP K + ++
Sbjct: 946 KYD-LSNQDHVVDAP-PLSP----FPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTP 996
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRL 971
S Y G SPSK L DIN+ +
Sbjct: 997 RSALLYKFNG-------SPSKSLKDINNMI 1019
>gi|148225699|ref|NP_001091542.1| retinoblastoma-like protein 2 [Bos taurus]
gi|146186627|gb|AAI40609.1| RBL2 protein [Bos taurus]
gi|296477992|tpg|DAA20107.1| TPA: retinoblastoma-like 2 (p130) [Bos taurus]
Length = 1140
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 153/622 (24%), Positives = 276/622 (44%), Gaps = 83/622 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E + +R + + + GN + W A LY+
Sbjct: 45 TQQRFDELCSR-LNMDEAARAEAWESYRS----MSESYTLEGNDL------HWLACALYV 93
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 94 ACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 142
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHR 199
R + L+ NF +++ K Y+ I+++ F P + +Q +S+
Sbjct: 143 PHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEVFH 202
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDS 249
F W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 203 FCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFH 262
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 263 AKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLT 319
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL-------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 320 G-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRC 368
Query: 361 --LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
GSG+ + V + ++ FD S +++PL+ G+ S V
Sbjct: 369 LNTGSGAETAERVQMKNILQQHFDK--SKALRVSTPLT----------GVRYIKDSSPCV 416
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVSTA + L T++ L + PS LE+ L+SC +D T + R + E I+
Sbjct: 417 TPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRSCSRDPTQAIANRLKEMYE-IYSQHFQ 475
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E G+N +I ++ R + LYY+VLE++ E + L +L+ +L + F
Sbjct: 476 SEE------DGSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAF 528
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 529 HRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLN 587
Query: 598 SLEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S +++ +
Sbjct: 588 QIEEQILDHLAWKPESPLWDRI 609
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRRRNSGSSDSRSHQNSP 953
Query: 859 TFYNK--------------IFVPAVKPLLVELGPAGTAMKTNRVSEVN-------HNN-- 895
T NK +P +P P + V E +NN
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDVEEEERGDLIQFYNNIY 1013
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K +A++S
Sbjct: 1014 IRQMKTFAMKYSQANAMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEAMLSP 1070
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1071 REKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1106
>gi|332208986|ref|XP_003253591.1| PREDICTED: retinoblastoma-like protein 1 [Nomascus leucogenys]
Length = 1068
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 162/662 (24%), Positives = 286/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEELPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP V+E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWVIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 761 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 819
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 820 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 879
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 880 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYV 939
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + +S +H D P P SP FP + SP+++S H+
Sbjct: 940 GRVKSF---------ALKYD-LSNQDHMMDVP-PLSP----FPHIKQQPGSPRRISQQHS 984
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+Y+SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 985 IYISP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|297707032|ref|XP_002830322.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Pongo abelii]
Length = 1069
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 287/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E ++ F + GN E W A LY+ R
Sbjct: 22 LQALCQE-LNLDEGSAAEALEDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 70
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 71 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 121
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 122 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 176
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 177 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 236
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 237 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 283
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 284 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 326
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 327 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 384
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 385 ITPVASATQSVSRLQSIVAGLKNSPSDQLINIFESCVRNPMENIMK----ILK------G 434
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 435 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVXETRRLHGMDMSVLLE 494
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 495 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 553
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 554 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 599
Query: 654 SG 655
+G
Sbjct: 600 TG 601
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 762 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 820
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 821 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 880
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 881 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYV 940
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + +S +H D P P SP FP + SP+++S H+
Sbjct: 941 GRVKSF---------ALKYD-LSNQDHMMDAP-PLSP----FPHIKQQPGSPRRISQQHS 985
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+Y+SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 986 IYISP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1027
>gi|397524105|ref|XP_003832050.1| PREDICTED: retinoblastoma-like protein 1 [Pan paniscus]
Length = 1031
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 286/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPMENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 50/266 (18%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 761 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 819
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 820 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 879
Query: 835 RSVFVDWASAR--QSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN 892
RSV + ++ D ++I + V + +L++
Sbjct: 880 RSVLLKSIPREVVAYNKNINDDFEMIDCADCSRVAVLIRILMD----------------- 922
Query: 893 HNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACV 950
+P +S FP + SP+++S H++Y+SP K + ++ S Y
Sbjct: 923 ---------APPLSPFPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSALLYKFN 970
Query: 951 GESTHAYQSPSKDLTDINHRLNSNRR 976
G SPSK L DIN+ + +
Sbjct: 971 G-------SPSKSLKDINNMIRQGEQ 989
>gi|114681879|ref|XP_001139919.1| PREDICTED: retinoblastoma-like protein 1 isoform 5 [Pan
troglodytes]
gi|410207844|gb|JAA01141.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249806|gb|JAA12870.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249808|gb|JAA12871.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249810|gb|JAA12872.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410293784|gb|JAA25492.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410293786|gb|JAA25493.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410331983|gb|JAA34938.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
Length = 1068
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 286/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPMENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 761 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 819
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 820 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 879
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 880 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYV 939
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + +S +H D P P SP FP + SP+++S H+
Sbjct: 940 GRVKSF---------ALKYD-LSNQDHMMDAP-PLSP----FPHIKQQPGSPRRISQQHS 984
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+Y+SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 985 IYISP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|402882604|ref|XP_003904828.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Papio anubis]
Length = 1067
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 160/662 (24%), Positives = 284/662 (42%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNCKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKFTG-DTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 MGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 55/264 (20%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV----------------------- 839
FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREFVAYNKNINDDFEMIDC 906
Query: 840 DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
D A + SG +++ D+I FYN I+V VK A+K + +S +H
Sbjct: 907 DLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHV 956
Query: 895 NDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
D P P SP FP + SP+++S H++Y+SP K + ++ S Y G
Sbjct: 957 MDAP-PLSP----FPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSALLYKFNG- 1007
Query: 953 STHAYQSPSKDLTDINHRLNSNRR 976
SPSK L +IN+ + +
Sbjct: 1008 ------SPSKSLKEINNMIRQGEQ 1025
>gi|34577077|ref|NP_899662.1| retinoblastoma-like protein 1 isoform b [Homo sapiens]
gi|21595246|gb|AAH32247.1| Retinoblastoma-like 1 (p107) [Homo sapiens]
gi|119596495|gb|EAW76089.1| retinoblastoma-like 1 (p107), isoform CRA_b [Homo sapiens]
gi|123994215|gb|ABM84709.1| retinoblastoma-like 1 (p107) [synthetic construct]
gi|124126913|gb|ABM92229.1| retinoblastoma-like 1 (p107) [synthetic construct]
Length = 1014
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 285/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFTASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 55/245 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 761 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 819
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 820 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 879
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 880 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYV 939
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + ++ +H D P P SP FP + SP+++S H+
Sbjct: 940 GRVKSF---------ALKYDLANQ-DHMMDAP-PLSP----FPHIKQQPGSPRRISQQHS 984
Query: 925 VYVSP 929
+Y+SP
Sbjct: 985 IYISP 989
>gi|34577079|ref|NP_002886.2| retinoblastoma-like protein 1 isoform a [Homo sapiens]
gi|90103515|sp|P28749.3|RBL1_HUMAN RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa
retinoblastoma-associated protein; Short=p107; AltName:
Full=pRb1
gi|119596494|gb|EAW76088.1| retinoblastoma-like 1 (p107), isoform CRA_a [Homo sapiens]
gi|158261783|dbj|BAF83069.1| unnamed protein product [Homo sapiens]
gi|168277456|dbj|BAG10706.1| retinoblastoma-like protein 1 [synthetic construct]
Length = 1068
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 285/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFTASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 761 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 819
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 820 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 879
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 880 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYV 939
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + ++ +H D P P SP FP + SP+++S H+
Sbjct: 940 GRVKSF---------ALKYDLANQ-DHMMDAP-PLSP----FPHIKQQPGSPRRISQQHS 984
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+Y+SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 985 IYISP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|292374|gb|AAA02489.1| p107 [Homo sapiens]
gi|449005|prf||1918267A p107 protein
Length = 1068
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 161/662 (24%), Positives = 285/662 (43%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFTASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 761 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 819
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 820 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 879
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 880 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERSDLIKFYNTIYV 939
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + ++ +H D P P SP FP + SP+++S H+
Sbjct: 940 GRVKSF---------ALKYDLANQ-DHMMDAP-PLSP----FPHIKQQPGSPRRISQQHS 984
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+Y+SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 985 IYISP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|345490209|ref|XP_003426328.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Nasonia
vitripennis]
Length = 1030
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 220/974 (22%), Positives = 392/974 (40%), Gaps = 199/974 (20%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETK-HLLLANISAIGNGMPEEAERFWFAFV 80
DAT + DLC+ L++D + E K + + H L E + W
Sbjct: 9 DATFMKHQDLCQK-LNMDASAASEAWKSYENIRQHYTL-----------EGDQLHWIGCA 56
Query: 81 LYLVRRLSE-----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPIL 135
LY R + K G N+Q N + +LR+ L +++FF + K+ +
Sbjct: 57 LYAACRKATTPTVGKTGANIQ----GNCVSFTRLLRLCNLPLIEFFTK-----SKAWADM 107
Query: 136 SNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGD-----KQSAAAS 189
N+ D+ R++ LQ NF S++ + Y+ I+++ F P+D G + A
Sbjct: 108 CNM-PQDFGARIDT--LQRNFSVSSVIFQKYQPIFKDIFKNPADDLGKPLRSRRHKAVPC 164
Query: 190 TSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS 249
T S F W LF+ ++ + ++ LV+ +L++ + + N + +
Sbjct: 165 TP---SRLFEFCWSLFICIK-------SKISAISDDLVNSYHLLLVCCDLMYSNALLANG 214
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKK---PCEASECKSEN 306
+ G+ + D+ E N +++ + ++ EA+ K +
Sbjct: 215 KELLNPDFPGLP---------ENFSDENYTPPETANCIVSLLCERYNAIAVEANTIKEYS 265
Query: 307 LENIDTDGLIYFENLM--DDSSLSSSLNILEKDYDNATRNK---------GELDERVFIN 355
L+ ++ E ++ D S+ S L L D +N NK G+LDER+F+
Sbjct: 266 LKPYLRK--LFNERVLRGDPSNYSGILEALNFDGNNKAINKAYEQHVLSVGDLDERIFLA 323
Query: 356 E---------------------------DDSLLGSGSLSGGAVNITGAKRKFDSLASPVK 388
E DS GS +N+T +F S +
Sbjct: 324 EWRRARLEGVSHFQVCDGEIARSMLSKGPDSNSNIGSSPSKMINMTDLHEQFQSKKEQLG 383
Query: 389 TITSPLSPHRSSASHPNGIAG----GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAE 444
T+ + P + G A P + + L++++ + PS +
Sbjct: 384 TM--------QHWAPPTPLTGRKYLKAKDVTNTAPNANPTQSVIRLQSLLVGCQALPSEK 435
Query: 445 LERFLKSCDKDVTTDVMRR----AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR 500
L K+ D+ T V + + EA P VT + N +D + ++R
Sbjct: 436 LLEMFKNRSPDIQTFVDSKIQDFGKMFCEAYSPK-------VTEQAEN-NCID--YGKKR 485
Query: 501 RLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLF 560
A L+Y+VLE + E ++T LL N F +C+ AC E+VL ++ F
Sbjct: 486 LQSAQTLFYKVLELVLNDEMSKKPNFDVTILLKNHDFLQCLFACCCEIVLYSYHYKERTF 545
Query: 561 PAVLERTGITAFDLSKVIESFIRHE-ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
P +L+ I A+ KVIE ++ + L R++ +HLN +EE +LES+ W+ GS ++ +L
Sbjct: 546 PWILKALNIEAYLFYKVIEVIVKVAVDQLTRDMVKHLNRIEEMILESLAWKSGSPLWRAL 605
Query: 620 T-VARPVLSAEINRLGL---LADPMPSLDAIATHINFSSGGL------SPVHSLHKHETS 669
V S E L L DP + I+ G SP+ S + S
Sbjct: 606 KDCDEGVPSYEDVALPGTFDLVDPNAPGQPVLRRIHIDRGAAHHDVVQSPISSASERFQS 665
Query: 670 PGQNGDIRSPKRPCTDYR-------------SVLVERNNFTSPVKDRLLGLNNLKSKPLP 716
P +G + KR +D + S+L + ++P ++ G+ + S P+
Sbjct: 666 PIPSG--LAKKRLFSDTKPGGAQSVLKAGGQSLLSRLTDQSNPTRN---GVGPVSSTPI- 719
Query: 717 PPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESV 775
A + + P G + +FF K L R+ + + L+++ ++ +
Sbjct: 720 -----ATVNRDQSKPRRTG------SLALFFRKFYNLTITRMQNLCQSLEITDIDLKRKI 768
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNL-TFREIIYNYRKQPQCKPQVF 834
+ +F+ + +RT L +RH+DQI++ Y + K+ ++ TF EI+ YR QPQ + ++
Sbjct: 769 WTIFEYSVKERTHLMKDRHLDQILMSAVYVICKVGKIGKNTFTEIMRCYRFQPQAESHIY 828
Query: 835 RSVFV-------------------------------DWASARQSGRSEQDHVDIITFYNK 863
RSV + D AS + SE+ D+I FYN
Sbjct: 829 RSVLISTNIDDNSEAALENGSNRNSQTNNTCPPTPSDMASTSRIYGSEE-RGDLIKFYNT 887
Query: 864 IFVPAVKPLLVELG 877
++VP VK +LG
Sbjct: 888 VYVPEVKDFAKKLG 901
>gi|156399369|ref|XP_001638474.1| predicted protein [Nematostella vectensis]
gi|156225595|gb|EDO46411.1| predicted protein [Nematostella vectensis]
Length = 1083
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 167/707 (23%), Positives = 299/707 (42%), Gaps = 97/707 (13%)
Query: 14 SESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAE 73
+ SN ++ T+ R ++C L++DE T + + + N + G+ +
Sbjct: 2 ASSNEDEDTITKERFDNVCSE-LNMDEETAESAWSSYETIR----TNYTLEGDSL----- 51
Query: 74 RFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S + N +L +LR KL+++ FF ++ ++L
Sbjct: 52 -HWLACALYVACRRSVVPTVDSSGTVEGNCVSLTRLLRASKLSLIQFFSKMKKWL----- 105
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGDKQSAAASTSG 192
++ A E R + + L+ NF +++ Y+ I+ + F PS+ Q + S
Sbjct: 106 ---DMSNASSEFRKKIEHLERNFQVSTVIFNKYRPIFLDLFKNPSEDTPKAQRSRKSRKQ 162
Query: 193 --YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVR 240
ISD F W L++ + + + DLV + L+ L ++ + +
Sbjct: 163 PCSISDVFSFCWTLYVEAKGNFPAISDDLVNSYHLLLCCLDLMYSNALAARHRRDLINTE 222
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEA 299
F ++R V+ + ++ LC+ Y + + I E + + +K+
Sbjct: 223 FEGLPSDFNTRDVRGPSDAPCIVDVLCTKYQGIVLEAKSIKEHYWKPFVQKLFEKRVLRG 282
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
E E+L I +D + ++ + K+Y+ + G+ DER+F+ E+
Sbjct: 283 HE---ESLSGI-----------LDLGNFEANWKAINKEYEEYVLSAGDFDERIFLGEEAH 328
Query: 360 L-LGSGSLSGGAVNI-----TGAKRKFDSLASPVKTIT--SPLSPHRSSASHPNGIAGGA 411
+ +G+ + G+ + +G K+ S +++ +PL+ R
Sbjct: 329 IEIGTPAKLFGSSEVDECQKSGLKKNLQEHFSKTRSLAPQTPLTGRRYLKE--------- 379
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
+TPVSTA + L+ + L PS L K C +D ++ R
Sbjct: 380 -KDPCITPVSTATQSVSRLQAMCSGLKPTPSERLLTIFKECSRDPLQSIIDRVE------ 432
Query: 472 FPSSGLGERCVTGSLQGANLMDNIWAEQRR--LEALKL----YYRVLEAMCTAEAQVLHA 525
LGE + +Q + N R L LKL YY+VLE + +E + L
Sbjct: 433 ----NLGEIFLKEYVQPSAERPNSPCSTREFALRRLKLAEILYYKVLENITLSEKRRLQG 488
Query: 526 K-NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRH 584
+LT+LL + FHR +LAC E+V+ ++ + FP V+ G+ + KVIES I+
Sbjct: 489 HLDLTTLLEQDVFHRSLLACCLEIVIFSYNS-QRTFPWVISILGLAPYYFYKVIESLIKA 547
Query: 585 EESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRL----------- 633
E+ L R++ +HLN +EE++LES+ W S ++ ++ A V S E +
Sbjct: 548 EDGLSRDVVKHLNHIEEQVLESLAWSGDSPLWMTIEQAGGVPSCEDVTIPNHVEAAHPNQ 607
Query: 634 GLLADPM--PSLDAIATHINFSSGGLSPVH-SLHKHETSPGQNGDIR 677
LLA P+ P L I +SP +L H SPG +G R
Sbjct: 608 NLLASPIMHPRLQRICGEEGMPRRIMSPTSPTLQDHFGSPGASGARR 654
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 80/312 (25%)
Query: 720 QSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLF 779
SA +P +P G + +FF K+ +A+VR+ + RL +++++R ++ F
Sbjct: 776 HSASTTPAKPKKTGS--------LALFFRKVYHMASVRLRDLCARLDVNEELRGKMWTCF 827
Query: 780 QQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
+ L + +RH+DQI++CC Y + K++ L+F+ I+ YR QPQ V+RSV +
Sbjct: 828 EHSLMHLPEIAKDRHLDQILMCCVYVMGKVTNSELSFQNIMKCYRTQPQAASHVYRSVMI 887
Query: 840 ------------------DWASARQSGRS------------------------EQDHVDI 857
D S R S E + D+
Sbjct: 888 KNRRRAPIPNTGSESSRGDSGSTRTSPIRSTSTIPSTPPPPGGSSSTENSPVLETERGDL 947
Query: 858 ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--S 915
I FYNK+F+ +K ++ + +++ SP +S P + + S
Sbjct: 948 IEFYNKVFIKTIKNFALKFSSSDRSLE-----------------SPPLSPLPIVRNQGHS 990
Query: 916 PKK-VSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN 974
P++ VSA H VY+SP K ++ +++ Y C E SP+K+L DINH L
Sbjct: 991 PRRQVSARHPVYISP---HKNGVPMTPTTRMLY-CFSE------SPAKNLRDINHMLRQG 1040
Query: 975 RRVRGTLNFDDV 986
+ L DD+
Sbjct: 1041 ENRKRALLQDDI 1052
>gi|383420481|gb|AFH33454.1| retinoblastoma-like protein 1 isoform a [Macaca mulatta]
Length = 1067
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 160/662 (24%), Positives = 284/662 (42%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLLRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKFTG-DTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 MGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 55/264 (20%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV----------------------- 839
FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREFVAYNKNINDDFEMIDC 906
Query: 840 DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
D A + SG +++ D+I FYN I+V VK A+K + +S +H
Sbjct: 907 DLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHV 956
Query: 895 NDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
D P P SP FP + SP+++S H++Y+SP K + ++ S Y G
Sbjct: 957 MDAP-PLSP----FPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSTLLYKFNG- 1007
Query: 953 STHAYQSPSKDLTDINHRLNSNRR 976
SPSK L +IN+ + +
Sbjct: 1008 ------SPSKSLKEINNMIRQGEQ 1025
>gi|300797136|ref|NP_001177995.1| retinoblastoma-like protein 1 [Rattus norvegicus]
Length = 1049
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 158/620 (25%), Positives = 270/620 (43%), Gaps = 90/620 (14%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F LP KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 AVNFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------AEEEI 330
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPH----RSSA-SHP-NGIAGGATSKMVVTPVST 422
G A +F L S ++ L H RS A S P G + V TPV++
Sbjct: 331 GTPRKFAADTQFGKLTSQA-SVDCNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVAS 389
Query: 423 AMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCV 482
A + L++++ L S PS +L +SC ++ ++++ G+GE
Sbjct: 390 ATQSVSRLQSIVAGLKSAPSEQLLTIFESCMRNPMGNIVKIV----------KGIGETFC 439
Query: 483 TGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
Q + +A R A LYY++LE + E + LH +++ LL + FHR
Sbjct: 440 QHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHR 499
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
+LAC E+VL + + FP +++ G+ F KVIE IR EE L R++ +HLNS+
Sbjct: 500 SLLACCLEIVLFAYSS-PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSI 558
Query: 600 EERLLESMVWEKGSSMYNSL 619
EE++LES+ W S+++ +L
Sbjct: 559 EEQILESLAWTNNSALWEAL 578
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 42/230 (18%)
Query: 727 TRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
T+ P G TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L
Sbjct: 770 TQDAPLTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVH 829
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF------- 838
L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 830 CPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGE 889
Query: 839 --------------VDWASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
++ A+ + SE ++ D+I FYN I+V VK
Sbjct: 890 VVAYNGDYEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNAIYVGRVKSF--------- 940
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSP 929
A+K + +S +H D P P SP FP + SP+++S H++YVSP
Sbjct: 941 ALKYD-LSNQDHIMDAP-PLSP----FPHIKQQPGSPRRISQQHSIYVSP 984
>gi|426242350|ref|XP_004015036.1| PREDICTED: retinoblastoma-like protein 2 [Ovis aries]
Length = 1082
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 259/568 (45%), Gaps = 68/568 (11%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 29 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW------- 78
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 79 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 137
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 138 CTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 197
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 198 KGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 257
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DS 359
E ENL ++ + S + K Y+ + G LDER+F+ ED +
Sbjct: 258 E---ENLTG-----------FLEPGNFGESFKAISKAYEEYVLSAGNLDERIFLGEDAEE 303
Query: 360 LLGSGS--LSGGAVNITGAKRKFDSL------ASPVKTITSPLSPHRSSASHPNGIAGGA 411
+G+ + L+ G+ T + + S+ S +++PL+ G+
Sbjct: 304 EIGTLARCLNAGSGTETAERAQMKSILQRHFDRSKALRVSTPLT----------GVRYIK 353
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
S VTPVSTA + L T++ L + PS +LE+ L+SC +D T + R + E I
Sbjct: 354 DSSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQTLRSCSRDPTQAIANRLKEMYE-I 412
Query: 472 FPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
+ E G+N +I ++ R + LYY+VLE++ E + L +L+ +
Sbjct: 413 YSQHFQSEE------DGSNCAKDIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGI 465
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE
Sbjct: 466 LEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCRE 524
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 525 VVKHLNQIEEQILDHLAWKPESPLWDRI 552
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 777 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 836
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 837 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRRRNSGSSDSRSHQNSP 896
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGT------------------ 881
R+ +D ++ + + VP + P L A +
Sbjct: 897 TELNRDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDVEEEERGDLIQFYNNIY 956
Query: 882 --AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
+KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 957 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNEG 1008
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1009 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1048
>gi|326927239|ref|XP_003209800.1| PREDICTED: retinoblastoma-like protein 2-like [Meleagris gallopavo]
Length = 1058
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 151/578 (26%), Positives = 259/578 (44%), Gaps = 82/578 (14%)
Query: 73 ERFWFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
E W A LY+ R K + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 5 ELHWLACALYVACR---KAIPTVSRGTVESNYVSLTRILRCSEQSLIEFFNKMKKW---- 57
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSD--ANGDKQSAAA 188
++ + R + L+ NF +++ K Y+ I+++ F P + +
Sbjct: 58 ----EDMANLPSQFRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQRGRKQR 113
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRF----KDLVTCTNGLVSILAILI---IHVP--- 238
+S+ +F W+LF +HA F DLV + L+ L ++ + P
Sbjct: 114 RQPCTVSEVFQFCWVLF----VHAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNHK 169
Query: 239 ----VRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILK 293
F+ S+ K S+ +I LCS++ + + I E I +
Sbjct: 170 ELLNPNFKGLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFD 229
Query: 294 KKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVF 353
KK + K ENL +D + S + K Y+ + G LDER+F
Sbjct: 230 KKLLKG---KDENLTG-----------FLDPGNFGDSFKAINKAYEEYVLSVGNLDERIF 275
Query: 354 INED-DSLLG---------SGSLSGGAVNIT-GAKRKFDSLASPVKTITSPLSPHRSSAS 402
+ ED D +G SG + V + ++ FD S +T+PL+ R
Sbjct: 276 LGEDADEEIGTLTRCLNTPSGMETAERVQVKHNLQQHFDRSKS--LRMTTPLTGRRYMKE 333
Query: 403 HPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
S VTPVS A + L T++ L + PS LE+ K+C +D + +
Sbjct: 334 ----------SNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFKACSRDPSQSIAS 383
Query: 463 RAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALKLYYRVLEAMCTAEAQ 521
R + + I+ S E + +NL ++ ++ RR E L YY+VLE++ E +
Sbjct: 384 RVKEMCD-IYCQSMQSEE------EFSNLSKDVASKHFRRAEVL--YYKVLESVIEQERR 434
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESF 581
L +L+++L + FHR +LAC E+V T+K + FP + E I + KVIE F
Sbjct: 435 RLGDADLSAVLEQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEIFDIPVYHFYKVIEVF 493
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
IR E+ L RE+ +HLN +EE++LESM W++ S +++ +
Sbjct: 494 IRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRI 531
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 59/309 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q A+ TR G +++FF K+ LA+VR+ + +L +S ++R+ V+
Sbjct: 738 PAQHLTATATRSRKMGS--------LSLFFRKVYHLASVRLRDLSVKLDISDELRKKVWT 789
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L + +RH+DQ+++C Y +AK+++ + +F+ I+ YR QPQ K V+RSV
Sbjct: 790 CFEYSLMHCPEIMMDRHLDQLLMCAIYVMAKVTKEDRSFQNIMRCYRTQPQAKSHVYRSV 849
Query: 838 FVDWA------------------SARQSGRSEQDHVDIITFYNKIFVP---AVKPLLVEL 876
+ + R R+ +D ++ + + VP + P L
Sbjct: 850 LIKGRRRRRQSGSSDSSSQQNSPTDRSKERTSRDSSPVMRSSSTLPVPHPSSAPPTPTRL 909
Query: 877 GPAGT---------------AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
A + ++ ++ E SP +S +P + SP++V
Sbjct: 910 TGANSDTEEEERGDLIQFYNSIYIEQIKEFALKYTSNGTDSPPLSPYPFVRISSPRRVQL 969
Query: 922 THN--VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---R 976
T N VY+SP K + +SH K +Y + SPSK L +IN + + +
Sbjct: 970 TQNHPVYISP---HKNVSALSHREKIFY-------YFSSSPSKRLKEINSMIRTGETPTK 1019
Query: 977 VRGTLNFDD 985
RG L DD
Sbjct: 1020 KRGILLEDD 1028
>gi|410953874|ref|XP_003983593.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Felis catus]
Length = 1068
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 273/626 (43%), Gaps = 102/626 (16%)
Query: 31 LCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRLS-- 88
LC+ L++DE + E + F + GN E W A LY+ R S
Sbjct: 24 LCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRKSII 72
Query: 89 EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLE 148
G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++ R+E
Sbjct: 73 PTVGKGIMEG---NCVSLTRILRSAKLSLIQFFNKMKKWMD-----MSNL-PQEFRERIE 123
Query: 149 AKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHRFGW 202
L+ NF +++ K ++ I+ + F LP KQ + + D F W
Sbjct: 124 --RLERNFEVSTVIFKKFEPIFLDIFQNPYEELPRLPRSRKQRRIPCS---VKDLFNFCW 178
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDSSRF 252
LF+ + + DLV + L+ L ++ I P R F+ +
Sbjct: 179 TLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFHTAD 238
Query: 253 VKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLENID 311
+ S + +IA LC ++D + + I E I+ + +K
Sbjct: 239 FRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK---------------- 282
Query: 312 TDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAV 371
++ E L+D SS + + + K+Y+ G+ DER+F+ D A
Sbjct: 283 ---ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------------AE 327
Query: 372 NITGAKRKFDSLASPVKTITSP------LSPH--RSSASHPNGIAGG----ATSKMVVTP 419
G RKF A P+ +T+ L H + ++ P+ G + V+TP
Sbjct: 328 EEIGTPRKFTGDA-PLGKLTAQANVDCNLQQHFEKKTSFAPSTPLTGRRYLQEKEAVITP 386
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
V++A + L++++ L + PS +L +SC ++ ++M+ G+GE
Sbjct: 387 VASATQSVSRLQSIVAGLKNAPSEQLMNIFESCIRNPMENIMKIV----------KGIGE 436
Query: 480 RCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
Q + +A R A LYY++LE + E + LH +++ LL +
Sbjct: 437 TFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDI 496
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++ +HL
Sbjct: 497 FHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHL 555
Query: 597 NSLEERLLESMVWEKGSSMYNSLTVA 622
NS+EE++LES+ W S+++ +L +
Sbjct: 556 NSIEEQILESLAWSHDSALWEALQAS 581
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 64/302 (21%)
Query: 714 PLPPPLQSAFASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVER 764
P+P QS + + N + GI+ +F+ K+ LA+VR+ + +
Sbjct: 750 PVPLTAQSLIGASPKQNHLTKAQEAHTAGISKPKRTGSLALFYRKVYHLASVRLRDLCLK 809
Query: 765 LQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYR 824
L +S ++R ++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR
Sbjct: 810 LDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYR 869
Query: 825 KQPQCKPQVFRSVFVDWASAR----------------------------QSGRSEQDHVD 856
QPQ V+RSV + SG +++ D
Sbjct: 870 NQPQANSHVYRSVLLKSIPKEVVAYNXNINGDFEMTDYELEDATKTPDCSSGPVKEERGD 929
Query: 857 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM-- 914
+I FYN I+V VK A++ + +S +H + P P SP FP +
Sbjct: 930 LIKFYNTIYVGRVKSF---------ALRYD-LSNQDHVMEAP-PLSP----FPHIKQQPG 974
Query: 915 SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN 974
SP+++S H++YVSP + + + ++ S Y G SPSK L DIN+ +
Sbjct: 975 SPRRISQQHSIYVSPHKNA---SGLTPRSALLYKFNG-------SPSKSLKDINNMIRQG 1024
Query: 975 RR 976
+
Sbjct: 1025 EQ 1026
>gi|73992372|ref|XP_534412.2| PREDICTED: retinoblastoma-like protein 1 [Canis lupus familiaris]
Length = 1068
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 160/662 (24%), Positives = 279/662 (42%), Gaps = 116/662 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ E
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL---PQEF 118
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R + L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 119 RERVERLERNFEVSTVIFKKFEPIFLDIFQNPYEEQPKFPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIICPNRRDLLNPTFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K S + +IA LC ++D + + I E I+ + +K + EC
Sbjct: 236 TADFKASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKVLKG-EC------ 288
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 289 ------------LLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF +P+ +T+ + S H A S + V
Sbjct: 326 -AEEEIGTPRKFTG-ETPLGKLTAQANVDCSLQQHFEKKTSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCIRNPMENIMKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L + A+ +P+ + + NF
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQAS--------------ANKVPTCEEVIFPNNFE 598
Query: 654 SG 655
+G
Sbjct: 599 TG 600
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 55/289 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 763 PKQTHLTKAQEAHPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 822
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 823 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 882
Query: 838 FV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAV 869
+ D A + SG +++ D+I FYN I+V V
Sbjct: 883 LLKSIPREVVAYNKNINGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVARV 942
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H + P P SP FP + SP+++S H++YV
Sbjct: 943 KSF---------ALKYD-LSNQDHVMEAP-PLSP----FPHIKQQPGSPRRISQQHSIYV 987
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 988 SP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|363741428|ref|XP_417312.3| PREDICTED: retinoblastoma-like protein 1 [Gallus gallus]
Length = 1061
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 148/574 (25%), Positives = 254/574 (44%), Gaps = 77/574 (13%)
Query: 76 WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY R S G + +G N +L ILR +L+++ FF ++ +++
Sbjct: 57 WLACALYAACRRSVLPTVGSGVMEG---NCVSLTRILRSARLSLIQFFSKMKKWM----- 108
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGDKQSAAASTSG 192
+SN+ E R + L+ NF +++ + ++ I+ + F P++ Q +
Sbjct: 109 DMSNV---PQEFRERVERLERNFEVSTVIFRKFEPIFLDIFQNPNEETSKPQRSRKQRRV 165
Query: 193 Y--ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR------- 240
+ D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 166 LCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFANAILCPNRRDLLNPS 225
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEA 299
F+ + +K S +IA+LC ++D + + I E I+ + +K
Sbjct: 226 FKGLPADFHAPEMKASEDPPCIIATLCELHDGLLVEAKGIKEHYFKPYISKLFDRK---- 281
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
++ E L+D + + + L K+Y+ G+ DERVF+ D
Sbjct: 282 ---------------ILKGECLLDLCNFTENNKALNKEYEEYVLTVGDFDERVFLGAD-- 324
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKT-----ITSPLSPH----RSSA-SHP-NGIA 408
A G RKF + KT + L H RS A S P G
Sbjct: 325 ----------AEEEIGTPRKFPADLQVGKTAARAHVECHLQQHFEKKRSFAPSTPLTGRR 374
Query: 409 GGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIIL 468
+ V+TPV++A + L+ ++ L + PS L +SC ++ ++ R I
Sbjct: 375 YLREKEAVITPVASATQSVSRLQNIVAGLKNAPSELLMAIFESCARNPAESIVNRVREIG 434
Query: 469 EAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNL 528
E S T L G+++ +A R A LYY++LE + E + LH K++
Sbjct: 435 ETFCRSYTQP----TDELPGSHI---DFAVNRLKLAEILYYKILETIMVQEMRRLHGKDM 487
Query: 529 TSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESL 588
T+LL + FHR ++AC E+VL + + FP ++E + F KVIE IR EE L
Sbjct: 488 TALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLRPFYFYKVIEVLIRSEEGL 546
Query: 589 PRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
R++ +HLNS+EE++LES+ W + S+++ +L +
Sbjct: 547 SRDMVKHLNSIEEQILESLAWTRDSALWTALQAS 580
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 60/272 (22%)
Query: 735 GETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNR 793
G +TG + +F+ K+ LA+VR+ + +L +S +R ++ F+ L L +R
Sbjct: 768 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDR 827
Query: 794 HIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA--------- 844
H+DQ++LC FY +AK+++ TF++I+ +YR QPQ V+RSV + SA
Sbjct: 828 HLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSANVLLDRNAN 887
Query: 845 --------------RQSGRSE---------QDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
GRS ++ D+I FYN ++V VK
Sbjct: 888 QDVQMTEDSSVKTGNSLGRSAAENSTELGTEERGDLIKFYNAVYVGRVKSF--------- 938
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPD--MSPKKVSATHNVYVSPLRTSKMDALI 939
A+K + ++ +H + P P SP FP++ +SP+++S H+VYVSP K A +
Sbjct: 939 ALKYD-ITNQDHVMEAP-PLSP----FPSIKQQPVSPRRISQQHSVYVSP---HKNGACL 989
Query: 940 SHSSKSYYACVGESTHAYQSPSKDLTDINHRL 971
+ + Y G SPSK L DIN+ +
Sbjct: 990 TPRTALLYKFNG-------SPSKSLKDINNMI 1014
>gi|355784516|gb|EHH65367.1| pRb1, partial [Macaca fascicularis]
Length = 1014
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/614 (24%), Positives = 267/614 (43%), Gaps = 105/614 (17%)
Query: 76 WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 5 WLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD---- 57
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAA 187
+SN+ ++ R+E L+ NF +++ K Y+ I+ + F P KQ
Sbjct: 58 -MSNL-PQEFRERIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLLRSRKQRRI 113
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR---- 240
+ + D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 114 PCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLL 170
Query: 241 ---FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + + S + +IA LC ++D + + I E I+ + +K
Sbjct: 171 NPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK- 229
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINE 356
++ E L+D SS + + + K+Y+ G+ DER+F+
Sbjct: 230 ------------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGA 271
Query: 357 DDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS--- 413
D A G RKF +P+ +T+ + + H A S
Sbjct: 272 D------------AEEEIGTPRKFTG-DTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPL 318
Query: 414 ---------KMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA 464
+ V+TPV++A + L++++ L + PS +L +SC ++ ++M+
Sbjct: 319 TGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMK-- 376
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQ 521
IL+ G+GE Q + +A R A LYY++LE + E +
Sbjct: 377 --ILK------GMGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETR 428
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESF 581
LH +++ LL + FH ++AC E+VL + + FP ++E + F KVIE
Sbjct: 429 RLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVV 487
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMP 641
IR EE L R++ +HLNS+EE++LES+ W S+++ +L V+ A+ +P
Sbjct: 488 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVS--------------ANKVP 533
Query: 642 SLDAIATHINFSSG 655
+ + + NF +G
Sbjct: 534 TCEEVIFPNNFETG 547
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 55/264 (20%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 734 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 793
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV----------------------- 839
FY +AK+++ TF+EI+ +YR QPQ V+R+V +
Sbjct: 794 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRNVLLKSIPREFVAYNKNINDDFEMIDC 853
Query: 840 DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
D A + SG +++ D+I FYN I+V VK A+K + +S +H
Sbjct: 854 DLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHV 903
Query: 895 NDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
D P P SP FP + SP+++S H++Y+SP K + ++ S Y G
Sbjct: 904 MDAP-PLSP----FPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSTLLYKFNG- 954
Query: 953 STHAYQSPSKDLTDINHRLNSNRR 976
SPSK L +IN+ + +
Sbjct: 955 ------SPSKSLKEINNMIRQGEQ 972
>gi|354469450|ref|XP_003497142.1| PREDICTED: retinoblastoma-like protein 1 [Cricetulus griseus]
Length = 1063
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 269/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++ +
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRD 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F LP KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAQEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P +TS + + H A S + V
Sbjct: 326 -AEEEIGTPRKF-AADTPFGKLTSEANVEYNLQQHFEKKPSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L + PS +L +SC ++ ++ + G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKNAPSEQLLNIFESCMRNPLENITKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWSSNSALWEAL 578
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNGDCEMTDGDIED 906
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN I+V VK A+K + +S +H D P
Sbjct: 907 ATKTPNCSSEPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHIVDAP 956
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K + ++ S Y G
Sbjct: 957 -PLSP----FPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG----- 1003
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 1004 --SPSKSLKDINNMIRQGEQ 1021
>gi|291390125|ref|XP_002711566.1| PREDICTED: retinoblastoma-like 2 (p130) [Oryctolagus cuniculus]
Length = 1139
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 273/633 (43%), Gaps = 85/633 (13%)
Query: 14 SESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAE 73
++S + R +LC L++DE E +R + + + GN +
Sbjct: 35 AQSAGSPTPQIQQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL----- 84
Query: 74 RFWFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 85 -HWLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW----- 135
Query: 133 PILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTS 191
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 136 ---EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRR 192
Query: 192 G--YISDYHRFGWLLFLALRIHAFSRFKD-------LVTCTNGLVSILAILIIH----VP 238
+S+ F W+LF+ + + F D L+ C LV A+ H V
Sbjct: 193 QPCTVSEIFHFCWVLFIYAKGN-FPMISDDLVNSYHLLLCALDLVYGNALQCSHRKELVN 251
Query: 239 VRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPC 297
F+ + ++ K S+ +I LCS++D + + I E I + +KK
Sbjct: 252 PNFKGLSEDFHAKDYKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLL 311
Query: 298 EASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED 357
+ E ENL +D + S + K Y+ + G LDERVF+ ED
Sbjct: 312 KGKE---ENLTG-----------FLDPGNFGESFKAINKAYEEYVLSVGNLDERVFLGED 357
Query: 358 DSL----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNG 406
GSG+ + V + ++ FD S I++PL+ G
Sbjct: 358 AEEEIGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------G 405
Query: 407 IAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHI 466
+ + VTPVSTA + L T++ L + PS +LE+ L++C +D T + R
Sbjct: 406 VRYIKENSPCVTPVSTATHSLSRLHTMLTGLKNAPSEKLEQILRTCSRDPTQAIANRLKE 465
Query: 467 ILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAK 526
+ E S E N ++ R + LYY+VLE++ E + L
Sbjct: 466 MYEIYSQHSQPDE-------DFNNCAKETASKHFRFAEM-LYYKVLESVIEQEQKRLGDM 517
Query: 527 NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEE 586
+L+ +L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+
Sbjct: 518 DLSGILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAED 576
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
L RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 577 GLCREVVKHLNQIEEQILDHLAWKSDSPLWDRI 609
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKDDRSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNRDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNVY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|440910036|gb|ELR59870.1| Retinoblastoma-like protein 2 [Bos grunniens mutus]
Length = 1137
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 151/622 (24%), Positives = 270/622 (43%), Gaps = 86/622 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E + +R + + + GN + W A LY+
Sbjct: 45 TQQRFDELCSR-LNMDEAARAEAWESYRS----MSESYTLEGNDL------HWLACALYV 93
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 94 ACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 142
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHR 199
R + L+ NF +++ K Y+ I+++ F P + +Q +S+
Sbjct: 143 PHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEVFH 202
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDS 249
F W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 203 FCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFH 262
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 263 AKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLT 319
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL-------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 320 G-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRC 368
Query: 361 --LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
GSG+ + V + ++ FD S +++PL+ G+ S V
Sbjct: 369 LNTGSGAETAERVQMKNILQQHFDK--SKALRVSTPLT----------GVRYIKDSSPCV 416
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVSTA + L T++ L + PS LE+ L+SC +D T + R + E
Sbjct: 417 TPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRSCSRDPTQAIANRLKEMYE-------- 468
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
+ Q N A + A LYY+VLE++ E + L +L+ +L + F
Sbjct: 469 ---IYSQHFQSEEDGSNYIASKHFRFAEMLYYKVLESVIEQEQKRLGDMDLSGILEQDAF 525
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 526 HRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLN 584
Query: 598 SLEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S +++ +
Sbjct: 585 QIEEQILDHLAWKPESPLWDRI 606
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 831 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 890
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 891 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRRRNSGSSDSRSHQNSP 950
Query: 859 TFYNK--------------IFVPAVKPLLVELGPAGTAMKTNRVSEVN-------HNN-- 895
T NK +P +P P + V E +NN
Sbjct: 951 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDVEEEERGDLIQFYNNIY 1010
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K +A++S
Sbjct: 1011 IRQMKTFAMKYSQANAMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEAMLSP 1067
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1068 REKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1103
>gi|449486109|ref|XP_004175454.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Taeniopygia guttata]
Length = 1048
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 247/563 (43%), Gaps = 62/563 (11%)
Query: 76 WFAFVLYLVRRLSE--KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G + +G N +L ILR +L+++ FF ++ +++
Sbjct: 50 WLACALYVACRRSRVPTVGSSPMEG---NGVSLTRILRSARLSLIQFFSKMKKWM----- 101
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF---LPSDANGDKQSAAAST 190
+SN+ E R + L+ NF +++ K ++ I+ + F + +
Sbjct: 102 DMSNL---PQEFRERVERLERNFEVSTVIFKKFEPIFFDIFQNPYEESSKPHRSRKQRRV 158
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHV---PVR------- 240
+ D F W LF+ + + DLV + L+ L ++ + P R
Sbjct: 159 PCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDVLNPS 218
Query: 241 FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEA 299
F+ + + +K S +IA LC ++D + + I E IA + +K
Sbjct: 219 FKGLPVEFHTLEIKSSEDPPCIIAMLCELHDGLLVEAKGIKEHYFKPYIAKLFDRK---- 274
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-D 358
++ + L+D + + + L K+Y+ G+ DERVF+ D +
Sbjct: 275 ---------------ILKGDCLLDLCNFTENSKTLNKEYEEYVLTVGDFDERVFLGADAE 319
Query: 359 SLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMV 416
+G+ A R + RS A S P G +
Sbjct: 320 EEIGTRKFPADVPGEKTAARTHMECH-----LQQHFEKKRSFAPSTPLTGRRYLREKETA 374
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC + +M R I E S
Sbjct: 375 ITPVASATQSVSRLQSMVAGLKNAPSEQLTAIFESCARSPLESIMSRVKEIGETFCCSYT 434
Query: 477 LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
T G+++ +A R A LYY++LE + E + LH K+LT+LL +
Sbjct: 435 QS----TDEQPGSHI---DFAVNRLKLAEILYYKILETIMVQETRRLHGKDLTALLEQDL 487
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
FHR +LAC E+VL + + FP ++E + F KVIE IR EE L R++ +HL
Sbjct: 488 FHRSLLACCLEIVLFAYSS-PRTFPWIIEVLDLKPFYFYKVIEVLIRSEEGLSRDMVKHL 546
Query: 597 NSLEERLLESMVWEKGSSMYNSL 619
NS+EE++LE++ W + S+++++L
Sbjct: 547 NSIEEQILENLAWTRHSALWDAL 569
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 54/261 (20%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S + ++ F+ L L +RH+DQ++LC
Sbjct: 769 LALFYRKVYHLASVRLRDLCLKLDVSNDLCRKIWTCFEFTLVHCADLMKDRHLDQLLLCA 828
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS------------------A 844
FY +AK+++ TF++I+ +YR QPQ V+RSV + S
Sbjct: 829 FYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRSTSDDVPLDKNANPDMEMTEAG 888
Query: 845 RQSGRSEQDHV---------DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNN 895
GRS ++ D+I FYN ++V VK ++ G ++ +H
Sbjct: 889 SSLGRSAAENSSESETEERGDLIKFYNTVYVGRVKSFALKYG----------ITNQDHVM 938
Query: 896 DGPCPGSPKVSVFPALPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGES 953
+ P P SP FP++ +SP+++S H+VYVSP K ++ + Y G
Sbjct: 939 EAP-PLSP----FPSIRQQPLSPRRISQQHSVYVSP---HKNGTCLTPRTALLYKFNG-- 988
Query: 954 THAYQSPSKDLTDINHRLNSN 974
SPSK L DIN+ L +
Sbjct: 989 -----SPSKSLKDINNMLKQD 1004
>gi|74151037|dbj|BAE27648.1| unnamed protein product [Mus musculus]
Length = 817
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 269/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH--------PNGIAGG----ATSKMV 416
A G RKF + +P +TS S + H P+ G + V
Sbjct: 326 -AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L S PS +L +SC ++ ++++ G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEAL 578
>gi|1871225|gb|AAB53235.1| p107 [Mus musculus]
Length = 1063
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 269/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH--------PNGIAGG----ATSKMV 416
A G RKF + +P +TS S + H P+ G + V
Sbjct: 326 -AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L S PS +L +SC ++ ++++ G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEAL 578
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+E + +YR QPQ V+RSV ++
Sbjct: 847 FYIMAKVTKEERTFQERMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGDIED 906
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN ++V VK A+K + +S +H D P
Sbjct: 907 ATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYD-LSNQDHIMDAP 956
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K A ++ S Y G
Sbjct: 957 -PLSP----FPHIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG----- 1003
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 1004 --SPSKSLKDINNMIRQGEQ 1021
>gi|410919169|ref|XP_003973057.1| PREDICTED: retinoblastoma-like protein 1-like [Takifugu rubripes]
Length = 1033
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 160/643 (24%), Positives = 281/643 (43%), Gaps = 102/643 (15%)
Query: 11 SNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPE 70
S +S S+ + + L LC+ L++DE T E ++ N +AI
Sbjct: 6 SLDSGSSRMEESSVRTVLEKLCQE-LNMDEQTATEAMQ-----------NFTAIWATHTL 53
Query: 71 EAERF-WFAFVLYLVRRLSEKN--GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQF 127
E + W A LY R G+ L +G N +L ILR KL+++ FF ++ ++
Sbjct: 54 EGDVVHWLACSLYAACRKGSTPTVGKGLMEG---NCVSLTRILRTSKLSLIQFFSKMRKW 110
Query: 128 LVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAA 187
+++ RL K+L+ NF ++ + ++ I+ + F + G++
Sbjct: 111 --------ADMSNLSQNFRLRLKQLERNFEVSMVIFRKFELIFVDMF--QNPQGEEPPRK 160
Query: 188 ASTSGY------ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNG--LVSILAILIIHVPV 239
+ T + I+D +F W LF ++A F C G LV+ +L+ + +
Sbjct: 161 SRTRKHRRLPCHITDVFKFCWTLF----VYAKGNF-----CMIGDDLVNSYHLLLCCLDL 211
Query: 240 RFRN-FNIHDSSRFVKKSNKGVD----------------LIASLCSIYDTSEDDLRKIME 282
F N + + S KG+ ++ LC ++D + + I +
Sbjct: 212 VFGNALLCSNRKELINSSFKGLPAAYHADGRTAPQRPPCVLERLCELHDGLVVEAKGIKQ 271
Query: 283 KT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNA 341
I + +K+ + +E + L+D + + L K+Y+
Sbjct: 272 HYFKPYIQKLFEKQILKGNE--------------EHLTELLDPQNFIENNKALNKEYEEY 317
Query: 342 TRNKGELDERVFINED-DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSS 400
G+ DERVF+ D D +G T K DS +S K + P S S+
Sbjct: 318 VLTVGDFDERVFLGADADEEIG-----------TPRKTVRDS-SSCQKNVEKPASLLPST 365
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
G A +K++ TP+S A + L++++ L + PS L + KSC +D T +
Sbjct: 366 PL--TGHAYLKENKVLGTPISLATQSVSRLQSMVAGLRTAPSENLMQIFKSCSRDPTESI 423
Query: 461 MRRAHIILEAIFPSSGL-GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE 519
+ R + + L E T + +AE+R A LYY+VLE + E
Sbjct: 424 LARVKTLGKIFKEHYALDSEDMPTSHID--------FAEKRLKLAEILYYKVLENVMVQE 475
Query: 520 AQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 579
+ LH K+++ LL + FH ++AC E+VL ++ + FP ++ + +F KVIE
Sbjct: 476 MKRLHGKDMSILLEQDIFHCSLMACCLEVVLFSYSS-QRTFPWIINIFKLASFYFFKVIE 534
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
FIR EE L R++ +HLN +EE++LES W S+++++L A
Sbjct: 535 VFIRSEEGLSRDMVKHLNQIEEQVLESQAWSTDSALWSALQAA 577
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 54/272 (19%)
Query: 726 PTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
P P+ G + +FF K+ LA+VR+ + +L +S +R ++ F+ L
Sbjct: 730 PAPPDAQAGSRPRRTGSLALFFRKVYHLASVRLRDLCWKLDISSDLRGKIWTCFEHTLIH 789
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF------- 838
T L RH+DQ++LC Y ++KI++ F +I+ YR QPQ V+R+V
Sbjct: 790 CTDLMRGRHLDQLLLCSVYIMSKITKETHFFHDIMKCYRSQPQAHSHVYRNVLLRHRECV 849
Query: 839 ------VDWASARQSGR--------------SEQDHVDIITFYNKIFVPAVKPLLVELGP 878
VD AS S E++ D+I FYN +FV VK +
Sbjct: 850 AEENMEVDPASVADSAEKTSQTSGDANVSQPGEEERGDLIQFYNSVFVLKVKNFALRYAV 909
Query: 879 AGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL--PDMSPKKVSATHNVYVSPLRTSKMD 936
+ + + +P +S FP++ +SP++VS H++YVSP + S +
Sbjct: 910 SDSEVWIQ---------------APPLSPFPSVRAQPLSPRRVSQRHSLYVSPHKNSTL- 953
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
SH+ SY S SPS++LT IN
Sbjct: 954 ---SHTVNSY------SYRINSSPSEELTAIN 976
>gi|213417847|ref|NP_035379.2| retinoblastoma-like protein 1 isoform 1 [Mus musculus]
gi|341942164|sp|Q64701.3|RBL1_MOUSE RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa
retinoblastoma-associated protein; Short=p107; AltName:
Full=pRb1
gi|74217646|dbj|BAE33564.1| unnamed protein product [Mus musculus]
Length = 1063
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 269/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH--------PNGIAGG----ATSKMV 416
A G RKF + +P +TS S + H P+ G + V
Sbjct: 326 -AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L S PS +L +SC ++ ++++ G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEAL 578
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGDIED 906
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN ++V VK A+K + +S +H D P
Sbjct: 907 ATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYD-LSNQDHIMDAP 956
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K A ++ S Y G
Sbjct: 957 -PLSP----FPHIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG----- 1003
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 1004 --SPSKSLKDINNMIRQGEQ 1021
>gi|37994624|gb|AAH60124.1| Retinoblastoma-like 1 (p107) [Mus musculus]
Length = 1063
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 269/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VRDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH--------PNGIAGG----ATSKMV 416
A G RKF + +P +TS S + H P+ G + V
Sbjct: 326 -AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L S PS +L +SC ++ ++++ G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEAL 578
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGDIED 906
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN ++V VK A+K + +S +H D P
Sbjct: 907 ATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYD-LSNQDHIMDAP 956
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K A ++ S Y G
Sbjct: 957 -PLSP----FPHIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG----- 1003
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 1004 --SPSKSLKDINNMIRQGEQ 1021
>gi|148674279|gb|EDL06226.1| retinoblastoma-like 1 (p107) [Mus musculus]
Length = 1075
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 143/578 (24%), Positives = 252/578 (43%), Gaps = 91/578 (15%)
Query: 76 WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 70 WLACSLYVACRKSIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD---- 122
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAA 187
+SN+ ++ R+E L+ NF +++ K ++ I+ + F P KQ
Sbjct: 123 -MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRI 178
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR---- 240
+ + D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 179 PCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLL 235
Query: 241 ---FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 NPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK- 294
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINE 356
++ E L+D SS + + + K+Y+ G+ DER+F+
Sbjct: 295 ------------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGA 336
Query: 357 DDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH--------PNGIA 408
D A G RKF + +P +TS S + H P+
Sbjct: 337 D------------AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKRSFAPSTPL 383
Query: 409 GG----ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA 464
G + V TPV++A + L++++ L S PS +L +SC ++ ++++
Sbjct: 384 TGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV 443
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQ 521
G+GE Q + +A R A LYY++LE + E +
Sbjct: 444 ----------KGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETR 493
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESF 581
LH +++ LL + FH+ ++AC E+VL + + FP ++E + F KVIE
Sbjct: 494 RLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVV 552
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 553 IRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEAL 590
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 799 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 858
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 859 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGDIED 918
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN ++V VK A+K + +S +H D P
Sbjct: 919 ATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYD-LSNQDHIMDAP 968
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K A ++ S Y G
Sbjct: 969 -PLSP----FPHIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG----- 1015
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 1016 --SPSKSLKDINNMIRQGEQ 1033
>gi|241174272|ref|XP_002410999.1| cell cycle regulator p107, putative [Ixodes scapularis]
gi|215495086|gb|EEC04727.1| cell cycle regulator p107, putative [Ixodes scapularis]
Length = 1064
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 210/926 (22%), Positives = 376/926 (40%), Gaps = 163/926 (17%)
Query: 20 DNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF-WFA 78
D D R ++C + L+++ T E +++ +I E ++F W A
Sbjct: 3 DGDHVITRFREVCVS-LNINPATRDEAFRIY-----------ESISMNYTLEGKQFHWIA 50
Query: 79 FVLYLVRRLSEKNGENLQQGSND----NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
LY+ R NG G N +L +L ++++DFF ++ ++
Sbjct: 51 CALYVECR----NGNTRTVGHKSCVAGNCVSLTRLLSTCDISLLDFFTKMKKW------- 99
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYI 194
+++ D R + ++ +F + + + Y I+ F + KQ+ ++GY
Sbjct: 100 -ADMTNLDDLMRRRLETIEKSFCVTAKIYEKYTAIFSAVFKEPSQDAPKQA----STGYK 154
Query: 195 -----------SDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAI-LIIHVPVRFR 242
SD F W L++ ++ DLV C + L+ + V +
Sbjct: 155 RRTSKLPPCTSSDVFNFLWTLYVYIKGRFSQISSDLVNCYHLLLCCIDYGYCTAVSAKRT 214
Query: 243 NFNIHD--SSRFVKKS----NKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILK--- 293
+ D +S+ K N+ V +I L + +D S +D A +L+
Sbjct: 215 DLLNQDFYTSQLEKAGEDCDNEDVGIIRELVNNHDGSYED------------ASVLRAHH 262
Query: 294 -KKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERV 352
K+P + +EN+ D L ++ S+ ++S L+K Y+ +GELDER+
Sbjct: 263 FKRP--IGKLMAENVLQGDIKTLTL---SLEPSAFNNSSRKLDKTYEERFLEEGELDERI 317
Query: 353 FINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGAT 412
F +D + + +R+ ++ V + P N A
Sbjct: 318 FFADD----AHERIGMPRHSFDTMQRRHNNGQGAVGKLIEASQPRTPLTGRGNLYNREAI 373
Query: 413 SKMVVTPVSTAMTTAKWLRTVICPLPSKPSAEL----ERFLKSCDKDVTTDVMRRAHIIL 468
++ +PVSTA A L+T++ + PS EL F + + + V I +
Sbjct: 374 NR---SPVSTATLCATKLQTLLADCKNAPSKELLTWFGEFEPTLETSIAETVREMGGIFV 430
Query: 469 EAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEA-QVLHAKN 527
+A + E+C + D +A +R L L+Y+VLE + E Q
Sbjct: 431 KAY--TQPAPEQCTVAA-------DTEFAHKRLLLGETLFYKVLENIIGIEKKQQRPNAE 481
Query: 528 LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEES 587
L++ L + F + + AC E+V+ + + FP +LE + ++ K+IE IR EE
Sbjct: 482 LSAHLCHGIFQQSLFACCLEIVMFCYNS-QREFPWILEIFDLVPYNFYKIIEPLIRAEEG 540
Query: 588 LPRELRRHLNSLEERLLESMVWEKGSSMYNSL--------TVARPVLSAEIN--RLGLLA 637
L RE+ +HLN EE++LE + W++ S ++ ++ T +L +I R
Sbjct: 541 LWREVVKHLNRTEEQILECLAWKEESPLWEAIEHSAQSVPTCKEVLLPRQIAGFREARPG 600
Query: 638 D-PMPSLDAIATHINFSSGGLSPVHSLHKHETS------------------PGQNGDIRS 678
D +P L +T + P SL + S + D +
Sbjct: 601 DGALPRLPVRSTKQMAKEDDIVPNGSLAERHVSIARRPLFAPSRERAGSDNSSKESDAGA 660
Query: 679 PKRPCTDYRSVLVE----RNNFTSPVK---DRLLGLNNLKSKPLPPPLQSAFASPTRPNP 731
+ C ++VLV R + +S K + N S+P+ P+ A + P N
Sbjct: 661 MDQKCKTSKTVLVSFSYVRESASSESKLMLSKSFMSNGEDSQPVAMPMTEA-SVPEPVNS 719
Query: 732 GGGGET---------------------CAET----------GINIFFCKINKLAAVRINA 760
GET C ET + +FF K+ L+AVR+
Sbjct: 720 MKNGETLQPSDMPTVESSVPEVVSSASCLETTKDGRPVRSGSLALFFRKVYHLSAVRLQD 779
Query: 761 MVERLQ-LSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREI 819
+ +RL L + ++ F+ + T L +RH+DQ+ILC Y V K++++N F+EI
Sbjct: 780 LCDRLNILDVDVCRKIWTCFEHSIVNHTDLMKDRHLDQLILCAVYVVTKVTKVNKCFQEI 839
Query: 820 IYNYRKQPQCKPQVFRSVFVDWASAR 845
+ YR+QPQ K V+RS+ + + R
Sbjct: 840 LQCYRQQPQTKSHVYRSILLRKNAGR 865
>gi|351708560|gb|EHB11479.1| Retinoblastoma-like protein 2 [Heterocephalus glaber]
Length = 1141
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 150/619 (24%), Positives = 271/619 (43%), Gaps = 83/619 (13%)
Query: 27 RLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRR 86
R +LC L++DE E +R + + + GN + W A LY+ R
Sbjct: 50 RFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVACR 98
Query: 87 LSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 99 ---KSVPTVSKGTVEGNYVSLTRILRCSQQSLIEFFNKMKKW--------EDMANLPPHF 147
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRFGW 202
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F W
Sbjct: 148 RERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHFCW 207
Query: 203 LLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSSRF 252
+LF+ + + DLV + L+ L ++ + V F+ + ++
Sbjct: 208 VLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHTKD 267
Query: 253 VKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENID 311
K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 268 SKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG-- 322
Query: 312 TDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL----------L 361
++ + S + Y+ + G LDER+F+ ED
Sbjct: 323 ---------FLEPGNFGESFKAINNAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCLNT 373
Query: 362 GSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
GSG+ S V + ++ FD S TI++PLS G+ + VTPV
Sbjct: 374 GSGTESAERVQMKNILQQHFDK--SKALTISTPLS----------GVRYIKENSPCVTPV 421
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
ST + L T++ L + PS +LE+ L++C +D + + R + E S E
Sbjct: 422 STTTHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPSQAIANRLKEMYEIYSQHSQPDE- 480
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
+ N I ++ R + LYY+VLE++ E + L A +L+ +L + FHR
Sbjct: 481 ------EFNNCAKEIASKHFRFAEI-LYYKVLESIIEQEQRRLGATDLSGILEQDAFHRS 533
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
+LAC E++ ++K FP + E + + KVIE FIR E+ L RE+ +HLN +E
Sbjct: 534 LLACCLEVITFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIE 592
Query: 601 ERLLESMVWEKGSSMYNSL 619
E++L+ + W+ S +++ +
Sbjct: 593 EQILDHLAWKPESPLWDKI 611
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 49/267 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q + +RH+DQ+++
Sbjct: 835 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSMIQCPEIMMDRHLDQLLM 894
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 895 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 954
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
R+ +D ++ + + VP + P L A + M+ ++ +NN
Sbjct: 955 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1014
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 1015 IKQIKTFALKYSQANIMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETILSP 1071
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDIN 968
K +Y + SPSK L +IN
Sbjct: 1072 REKIFY-------YFSNSPSKRLREIN 1091
>gi|348563785|ref|XP_003467687.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Cavia porcellus]
Length = 1071
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 161/659 (24%), Positives = 282/659 (42%), Gaps = 110/659 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL++++FF ++ +++ ++ E
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIEFFSKMKKWM--------DMLNLPQEF 118
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHR 199
R + L+ NF +++ K ++ I+ + F LP KQ + + D
Sbjct: 119 RERIERLERNFEVSTVIFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFANAIMCPNRRDLLNLSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E IA + +K
Sbjct: 236 TADFRASAEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYIAKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSP------LSPH----RSSA-SHP-NGIAGGATSKMV 416
A G RKF +P+ +T L H RS A S P G + V
Sbjct: 326 -AEEEIGTPRKFTG-DTPLGKLTMQANMECNLQQHFEKKRSFAPSTPLTGRGYLREKETV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ I E
Sbjct: 384 ITPVASATQSVSRLQSIVTGLKNAPSEQLTSIFESCMRNPMENIMKIVKNIGETF----- 438
Query: 477 LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
+ Q + +D +A R A LYY++LE + EA+ LH +++ LL
Sbjct: 439 CQHYTQSTDEQPGSHID--FAVNRLKLAEILYYKILETVMVQEARRLHGMDMSVLLEQNI 496
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
FH ++AC E+VL + + FP ++E + F +VIE IR EE L R++ +HL
Sbjct: 497 FHHSLMACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFFQVIEVVIRSEEGLSRDMVKHL 555
Query: 597 NSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
NS+EE++LES+ W S+++ +L+ + A+ +P+ + + NF +G
Sbjct: 556 NSIEEQILESLAWSHNSALWEALSAS--------------ANKVPTCEEVIFPNNFETG 600
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 51/259 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S +R ++ F+ L L NRH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCPDLMKNRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR----------------- 845
FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREIVTYNNEISGDFEMTDG 906
Query: 846 -----------QSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
SG +++ D+I FYN I+V VK A+K + +S +H
Sbjct: 907 DLEETIKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHM 956
Query: 895 NDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGE 952
P +S FP + S +++S H++YVSP K + ++ S Y G
Sbjct: 957 VHFKW-MLPPLSPFPHIEQQTGSXRRISQQHSIYVSP---HKNGSSLTPRSALLYKFNG- 1011
Query: 953 STHAYQSPSKDLTDINHRL 971
SPSK L DIN+ +
Sbjct: 1012 ------SPSKSLKDINNMI 1024
>gi|301752866|ref|XP_002912283.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Ailuropoda melanoleuca]
Length = 1137
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 151/622 (24%), Positives = 275/622 (44%), Gaps = 84/622 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 TQQRFDELCSR-LNMDEAARAEAWDSYRN----MSESYTLEGNDL------HWLACALYV 91
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 ACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 140
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHR 199
R + L+ NF +++ K Y+ I+++ F P + +Q +S+
Sbjct: 141 PHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEVFH 200
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDS 249
F W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 201 FCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFH 260
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 261 AKDFKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLT 317
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED--------DSL 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 318 G-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRC 366
Query: 361 LGSGSLSGGAVNITGA---KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
L SGS + A + ++ FD S I++PL+ G+ + V
Sbjct: 367 LNSGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYMKDNSPCV 414
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVSTA + L T++ L + PS +LE+ L++C +D T + R + E I+
Sbjct: 415 TPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYE-IYSQHCQ 473
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
+ + S + I ++ R + LYY+VLE++ E + L +L+ +L + F
Sbjct: 474 SDEDFSNSKE-------IASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAF 525
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 526 HRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLN 584
Query: 598 SLEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S +++ +
Sbjct: 585 QIEEQILDHLAWKPESPLWDRI 606
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 139/307 (45%), Gaps = 63/307 (20%)
Query: 717 PPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVY 776
PPL S+ P + + +++FF K+ LA VR+ + +L +S ++R+ ++
Sbjct: 818 PPLTSSSIRPRK-----------TSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIW 866
Query: 777 CLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRS 836
F+ + Q L +RH+DQ+++C Y +AK+++ + +F+ I+ YR QPQ + QV+RS
Sbjct: 867 TCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRS 926
Query: 837 VFVDWASARQSG------------------RSEQDHVDIITFYNKIFVP---AVKPLLVE 875
V + R++ R+ +D ++ + + VP + P
Sbjct: 927 VLIKGKRKRRNSGSSDSRSHQNSPTELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTR 986
Query: 876 LGPAGTAMKTNRVSEV--NHNN--------------DGPCPGSPKVSVFPALPDMSPKKV 919
L A + M+ ++ +NN +P +S +P + SP+++
Sbjct: 987 LTGANSDMEEEERGDLIQFYNNIYIKQIKTFAMKYSQANVTDAPPLSPYPFVRTGSPRRI 1046
Query: 920 --SATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR-- 975
S H VY+SP K + ++S K +Y + SPSK L +IN + +
Sbjct: 1047 QLSQNHPVYISP---HKNETMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETP 1096
Query: 976 -RVRGTL 981
+ RG L
Sbjct: 1097 TKKRGIL 1103
>gi|413925019|gb|AFW64951.1| hypothetical protein ZEAMMB73_472172 [Zea mays]
Length = 185
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 97/150 (64%), Gaps = 5/150 (3%)
Query: 163 SKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTC 222
S+ Y++ Y E F +G +S DY FGW LFL LR + FKDLV+C
Sbjct: 28 SRFYRKAYNELF-----SGLITEWEPESSTNTPDYMLFGWHLFLTLRSRSPELFKDLVSC 82
Query: 223 TNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIME 282
+GLV++LAIL++HVP +FR F I SS +K++ KGVDLIASLC Y TSE+ L+++M+
Sbjct: 83 IHGLVAVLAILLVHVPAKFRTFTIEGSSHLIKQTEKGVDLIASLCHNYHTSEECLKEMMD 142
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDT 312
K++ I ++ K ASECK+ENL+ IDT
Sbjct: 143 KSHKAIEEVFSMKALSASECKTENLDKIDT 172
>gi|1144388|gb|AAB18279.1| p107, partial [Mus musculus]
Length = 1063
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 148/597 (24%), Positives = 260/597 (43%), Gaps = 92/597 (15%)
Query: 58 LANISAIGNGMPEEAERF-WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI E E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKGVMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ + + D F W LF+ + + DLV + L+
Sbjct: 148 QNPYEEPPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 229 ILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
L ++ I P R F+ + K + +IA LC ++D + +
Sbjct: 205 CLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAXEEPPCIIAVLCDLHDGLLVEAK 264
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKD 337
I E I+ + KK ++ E L+D SS + + + K+
Sbjct: 265 GIKEHYFKPYISKLFDKK-------------------ILKGECLLDLSSFTDNSKAVNKE 305
Query: 338 YDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPH 397
Y+ G+ DER+F+ D A G RKF + +P +TS S
Sbjct: 306 YEEYVLTVGDFDERIFLGAD------------AEEEIGTPRKFTA-DTPFGKLTSQASVE 352
Query: 398 RSSASH--------PNGIAGG----ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAEL 445
+ H P+ G + V TPV++A + L++++ L S PS +L
Sbjct: 353 CNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQL 412
Query: 446 ERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLM--DNIWAEQRRLE 503
+SC ++ ++++ G+GE Q + +I RL+
Sbjct: 413 LNIFESCMRNPMGNIIKTV----------KGIGETFCQHYTQSTDKQPGSHIDFAVNRLK 462
Query: 504 ALK-LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
+ LYY++LE + E + LH +++ LL + FH+ ++AC E+VL + + FP
Sbjct: 463 LXEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPW 521
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 522 IIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEAL 578
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 787 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 846
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 847 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGDIED 906
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN ++V VK A+K + +S +H D P
Sbjct: 907 ATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYD-LSNQDHIMDAP 956
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K ++ S Y G
Sbjct: 957 -PLSP----FPHIKQQPGSPRRISQQHSLYVSP---HKNGCGLTPRSALLYKFNG----- 1003
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 1004 --SPSKSLKDINNMIRQGEQ 1021
>gi|344279617|ref|XP_003411584.1| PREDICTED: retinoblastoma-like protein 1 [Loxodonta africana]
Length = 1067
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 151/632 (23%), Positives = 269/632 (42%), Gaps = 104/632 (16%)
Query: 58 LANISAIGNGMPEEAERF-WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI E E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LDDFTAIRGNYSLEGEVIHWLACSLYVACRKSVIPTVGKGIMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ ++ E R + L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWM--------DMLNLPQEFRERIERLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 ------LPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
LP KQ + + D F W LF+ + + DLV + L+
Sbjct: 148 QNPYEELPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 204
Query: 229 ILAILIIHV---PVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
L ++ + P R F+ H + + S + +IA LC ++D + +
Sbjct: 205 CLDLIFANALICPNRRDLLNPSFKGLPPHFHTADFRASEEPPCIIAELCELHDGLLVEAK 264
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKD 337
I E I+ + +K ++ E L+D SS + + + K+
Sbjct: 265 GIKEHYFKPYISKLFDRK-------------------ILKGECLLDLSSFTDNSKAVNKE 305
Query: 338 YDNATRNKGELDERVFINED-DSLLG----------SGSLSGGAVNITGAKRKFDSLASP 386
Y+ G+ DER+F+ D + +G SG L+ A ++ F+
Sbjct: 306 YEEYVLTVGDFDERIFLGADAEEEIGTPQKFPSDTQSGKLTARANVECNLQQHFEK---- 361
Query: 387 VKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELE 446
K +P +P G + VVTPV++A + L+ V+ L + PS +L
Sbjct: 362 -KRTFAPSTPL-------TGRRYLREKEAVVTPVASATQSVSRLQGVVAGLKNAPSQQLI 413
Query: 447 RFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRLE 503
+SC ++ ++ + G+GE Q A+ +A R
Sbjct: 414 NIFESCMRNPLENITKIV----------KGIGESFCQHYTQPADDQPGSHIDFAVNRLKL 463
Query: 504 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAV 563
A LYY++LE + E + LH +++ LL + FH ++AC E+VL + + FP +
Sbjct: 464 AEILYYKMLETVMVQETRRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWI 522
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
+E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 523 IEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS- 581
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
A+ +P+ + + NF +G
Sbjct: 582 -------------ANKVPTCEEVIFPNNFETG 600
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 131/277 (47%), Gaps = 55/277 (19%)
Query: 730 NPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSL 789
+P G + + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L + L
Sbjct: 774 HPTGISKPKKTGSLALFYRKVYHLASVRLRDLCLKLDISNELRRKIWTCFEFTLVHCSDL 833
Query: 790 FFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV---------- 839
+RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 834 MKDRHLDQLLLCSFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKTVPREVVTY 893
Query: 840 -------------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
D A Q SG ++ D+I FYN I+V VK
Sbjct: 894 SENINGDIEMTDCDLEDATQTTDCSSGPVREERGDLIKFYNTIYVGRVKSF--------- 944
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALI 939
A+K + +S H + P P SP FP + SP+++S H++YVSP K A +
Sbjct: 945 ALKYD-LSNQAHMMEAP-PLSP----FPHIKQQPGSPRRISQQHSIYVSP---HKNGAGL 995
Query: 940 SHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+ S Y G SPSK L DIN+ + +
Sbjct: 996 TPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1025
>gi|395839424|ref|XP_003792589.1| PREDICTED: retinoblastoma-like protein 2 [Otolemur garnettii]
Length = 1139
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 151/622 (24%), Positives = 268/622 (43%), Gaps = 83/622 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E +R + + GN + W A LY+
Sbjct: 45 TQLRFDELCSR-LNMDEAARAEAWDSYRSISE----SYTLEGNDL------HWLACALYV 93
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 94 ACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 142
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHR 199
R + L+ NF +++ K Y+ I+++ F P + +Q +S+
Sbjct: 143 PHFRERTQRLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFH 202
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDS 249
F W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 203 FCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFH 262
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
++ K S+ +I LCS +D + + I E I + +KK E E L
Sbjct: 263 AKEPKPSSDPPCVIEKLCSSHDGLVLEAKGIKEHFWKPYIRKLYEKKILRGKE---ETLT 319
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL-------- 360
++ + + S + K Y+ + G LDER+F+ ED
Sbjct: 320 G-----------FLEPGNFAESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRC 368
Query: 361 --LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
GSG+ + V + ++ FD S I++PL+ G+ + V
Sbjct: 369 LNTGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYVRENSPCV 416
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVSTA + L TV+ L + PS +LE+ L++C +D T + R + E S
Sbjct: 417 TPVSTATHSLSRLHTVLTGLKNAPSEKLEQILRACSRDPTQAIANRLKEMYEIYCQHSQP 476
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
E N I ++ R + LYY+VLE++ E + L +L+ +L + F
Sbjct: 477 EENF-------GNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDTDLSGILEQDAF 528
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 529 HRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLN 587
Query: 598 SLEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 588 QIEEQILDHLAWKPESPLWERI 609
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D +I + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVIRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +A
Sbjct: 1014 IKQIKTFAMKYSQTNMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNEA 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|2137620|pir||I49329 retinoblastoma-associated protein homolog p68 - mouse
Length = 592
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 148/597 (24%), Positives = 258/597 (43%), Gaps = 92/597 (15%)
Query: 58 LANISAIGNGMPEEAERF-WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI E E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 37 LDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKGVMEG---NCVSLTRILRSAK 93
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F
Sbjct: 94 LSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIF 145
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ + + D F W LF+ + + DLV + L+
Sbjct: 146 QNPYEEPPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLC 202
Query: 229 ILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLR 278
L ++ I P R F+ + K + + +IA LC ++D + +
Sbjct: 203 CLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDGLLVEAK 262
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKD 337
I E I+ + KK ++ E L+D SS + + + K+
Sbjct: 263 GIKEHYFKPYISKLFDKK-------------------ILKGECLLDLSSFTDNSKAVNKE 303
Query: 338 YDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPH 397
Y+ G+ DER+F+ D A G RKF + +P +TS S
Sbjct: 304 YEEYVLTVGDFDERIFLGAD------------AEEEIGTPRKFTA-DTPFGKLTSQASVE 350
Query: 398 RSSASHPNGIAGGATS------------KMVVTPVSTAMTTAKWLRTVICPLPSKPSAEL 445
+ H A S + V TPV++A + L++++ L S PS +L
Sbjct: 351 CNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQL 410
Query: 446 ERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRL 502
+SC ++ ++++ G+GE Q + +A R
Sbjct: 411 LNIFESCMRNPMGNIIKIV----------KGIGETFCQHYTQSTDKQPGSHIDFAVNRLK 460
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
A LYY++LE + E + LH +++ LL + FH+ ++AC E+VL + + FP
Sbjct: 461 LAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSS-PRTFPW 519
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 520 IIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEAL 576
>gi|126296327|ref|XP_001372085.1| PREDICTED: retinoblastoma-like protein 2 [Monodelphis domestica]
Length = 1145
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 151/627 (24%), Positives = 270/627 (43%), Gaps = 93/627 (14%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T R +LC L++DE E + +R + + GN + W A LY+
Sbjct: 52 TRQRFDELCGR-LNMDEEARAEAWESYRNMSQ----SYTLEGNDL------HWLACALYV 100
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 101 ACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 149
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISD 196
R + L+ NF +++ K Y+ I+++ F P G K T +S+
Sbjct: 150 SRFRERTERLERNFTVSAVIFKKYEPIFQDIFRYSQEEPPRQQRGRKYRRQPCT---VSE 206
Query: 197 YHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNI 246
+F W+LF+ + + DLV + L+ L ++ + + F+
Sbjct: 207 VFQFCWVLFVYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELLNPNFKGLPE 266
Query: 247 HDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSE 305
S+ K S+ +I LC+++D + + I E I + +KK + E E
Sbjct: 267 DFHSKDSKPSSDPPCVIEPLCALHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGRE---E 323
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL----- 360
NL +D + S+ + K Y+ + G LDER+F+ ED
Sbjct: 324 NLTG-----------FLDPGNFGDSIKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTL 372
Query: 361 -----LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSK 414
GSG + V + + ++ FD S I++PL+ R +
Sbjct: 373 TRCLNTGSGLETAERVQVKYSLQQHFDK--SKAFRISTPLTGRRYIKEN----------N 420
Query: 415 MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPS 474
VTPVS A + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 421 PYVTPVSIATHSLSRLHTMLAGLKNSPSEKLEQVLRACTRDPTQSIANRLKEMYEIY--- 477
Query: 475 SGLGERCVTGSLQGA--NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL 532
C G + I ++ R + LYY+VLE++ E + L +L+ +L
Sbjct: 478 ------CQHSQADGDFNSCAKEIASKHFRYAEI-LYYKVLESVIDQEQKRLGDIDLSGIL 530
Query: 533 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
+ FHR +LAC E++ ++K FP + E + + KVIE FIR E+ L RE+
Sbjct: 531 EQDAFHRSLLACCLEVITFSYKPPGN-FPFIAEIFDVPLYHFYKVIEVFIRAEDGLCREV 589
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSL 619
+HLN +EE++L+ M W+ S +++ +
Sbjct: 590 VKHLNHIEEQILDHMAWKPESPLWDRI 616
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 51/282 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA+VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 840 SSLSLFFRKVYHLASVRLRDLCAKLDISDELRKKIWTCFEFSVVQCPELMMDRHLDQLLM 899
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV-----------------DWAS 843
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + + +
Sbjct: 900 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKRRRRRNSGSSDSRSHQNSPT 959
Query: 844 ARQSGRSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN--- 895
R+ +D ++ + + VP + P L A + ++ ++ +NN
Sbjct: 960 EVNKERTSRDSSPVMRSSSTLPVPQPNSAPPTPTRLTGANSDIEEEERGDLIQFYNNIYV 1019
Query: 896 -----------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHS 942
P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 1020 EQIQTFARKYSQANTTDVPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEMMLSPR 1076
Query: 943 SKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1077 EKIFY-------YFSSSPSKRLKEINSMIRTGETPTKKRGIL 1111
>gi|403281366|ref|XP_003932159.1| PREDICTED: retinoblastoma-like protein 1 [Saimiri boliviensis
boliviensis]
Length = 1115
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 258/571 (45%), Gaps = 72/571 (12%)
Query: 76 WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 106 WLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD---- 158
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-----PSDANGDKQSAAA 188
+SN+ ++ R+E L+ NF +++ K ++ I+ + F P KQ
Sbjct: 159 -MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLRSRKQRRIP 214
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR----- 240
+ + D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 215 CS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLN 271
Query: 241 --FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPC 297
F+ + + S + +IA LC ++D + + I E I+ + +K
Sbjct: 272 PSFKGLPSDFHTADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK-- 329
Query: 298 EASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED 357
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 330 -----------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD 372
Query: 358 -DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSK 414
+ +G+ G ++ K + A+ + RS A S P G +
Sbjct: 373 AEEEIGTPRKFTGDTSLG----KMTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKE 428
Query: 415 MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPS 474
++TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+
Sbjct: 429 ALITPVASATQSVSRLQSIVAGLKNAPSEQLLNIFESCVRNPMENIMK----ILK----- 479
Query: 475 SGLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
G+GE Q + +A R A LYY++LE + E + LH +++ L
Sbjct: 480 -GIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSLL 538
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
L + FH ++AC E+VL + + FP ++E + F KVIE IR EE L R+
Sbjct: 539 LEQDIFHYSLMACCLEIVLFAYSS-PRTFPWIIEILNLQPFYFYKVIEVVIRSEEGLSRD 597
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+ +HLNS+EE++LES+ W S+++ +L V+
Sbjct: 598 MVKHLNSIEEQILESLAWSHNSALWEALQVS 628
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 55/289 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 810 PKQTNLTKAQEVHPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 869
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 870 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 929
Query: 838 FV-----------------------DWASARQS-----GRSEQDHVDIITFYNKIFVPAV 869
+ D A ++ G +++ D+I FYN I+V V
Sbjct: 930 LLKSIPREVVAYNKKINDDFEMIDCDLEDAAKTPDCSNGPVKEERGDLIKFYNTIYVGRV 989
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H D P P SP FP + SP+++S H++YV
Sbjct: 990 KSF---------ALKYD-LSNQDHVMDVP-PLSP----FPHIKQQPGSPRRISQQHSIYV 1034
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 1035 SP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1073
>gi|417405745|gb|JAA49574.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 1067
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 159/658 (24%), Positives = 281/658 (42%), Gaps = 109/658 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +I+ K ++ I+ + F P KQ T + D
Sbjct: 121 RIE--RLERNFEVSTIIFKKFEPIFLDIFQNPYEETPKLPRSRKQRRTPCT---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRAPEEPPCVIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSP------LSPHRSSASH-PNGIAGGA----TSKMVV 417
A G RKF +P+ +T+ L H S P+ G + +
Sbjct: 326 -AEEEIGTPRKFAG-DTPLGKLTTQANVECNLQHHFEKKSFAPSTPLTGRRYLREKEAAI 383
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPV++A + L++V+ + + PS +L +SC ++ ++M+ I E
Sbjct: 384 TPVASATQSVSRLQSVVTGMKNAPSEQLTSIFESCMRNPMENIMKIVKEIGETF-----C 438
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
+ Q + +D +A R A LYY++LE + E + LH +++ LL + F
Sbjct: 439 QHYTQSTDEQPGSHID--FAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIF 496
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HR ++AC E+VL + + FP ++E + F KVIE IR EE L R++ +HLN
Sbjct: 497 HRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLN 555
Query: 598 SLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
S+EE++LES+ W S+++ +L + A+ +P+ + + NF +G
Sbjct: 556 SIEEQILESLAWNHNSALWEALQAS--------------ANKVPTCEEVIFPNNFETG 599
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 55/289 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 762 PKQTHLTKAQEVHPTGLSRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 821
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 822 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 881
Query: 838 FVDWASAR----------------------------QSGRSEQDHVDIITFYNKIFVPAV 869
+ S ++ D+I FYN ++V V
Sbjct: 882 LLKSIPREVVTYDKKINGDFEMTDCDLEDGTNTPDCSSAPVREERGDLIKFYNTVYVGRV 941
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H + P P SP FP + SP+++S H++YV
Sbjct: 942 KSF---------ALKYD-LSNQDHMMEAP-PLSP----FPYIKQQPGSPRRISQQHSIYV 986
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
SP K ++ + Y G SPSK L DIN+ + +
Sbjct: 987 SP---HKNGPGLTPRTALLYKFNG-------SPSKSLKDINNMIRQGEQ 1025
>gi|26329065|dbj|BAC28271.1| unnamed protein product [Mus musculus]
Length = 594
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 268/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P +TS S + H A S + V
Sbjct: 326 -AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKQSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L S PS +L +SC ++ ++++ G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEAL 578
>gi|213417872|ref|NP_001132988.1| retinoblastoma-like protein 1 isoform 2 [Mus musculus]
gi|1871227|gb|AAB53236.1| p68 [Mus musculus]
Length = 594
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 268/626 (42%), Gaps = 102/626 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGVMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ K + + +IA LC ++D + + I E I+ + KK
Sbjct: 236 APDFKAAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF + +P +TS S + H A S + V
Sbjct: 326 -AEEEIGTPRKFTA-DTPFGKLTSQASVECNLQQHFEKKRSFAPSTPLTGRRYLQEKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPV++A + L++++ L S PS +L +SC ++ ++++ G
Sbjct: 384 TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 553 KHLNSIEEQILESLAWTNNSALWEAL 578
>gi|431894364|gb|ELK04164.1| Retinoblastoma-like protein 1 [Pteropus alecto]
Length = 1053
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 159/662 (24%), Positives = 286/662 (43%), Gaps = 128/662 (19%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF-WFAFVLYLVRR 86
L LC+ L++DE + E L + +AI E E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEA-----------LDDFTAIRGTYSLEGEVIHWLACSLYVACR 68
Query: 87 LS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 69 KSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFR 119
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFL-----PSD--ANGDKQSAAASTSGYISDY 197
R+E L+ NF +++ K ++ I+ + F PS KQ + + + +
Sbjct: 120 ERIE--RLERNFEVSTVIFKKFQPIFLDIFQNPYEEPSKLFPRSRKQRRSPCS---VKEL 174
Query: 198 HRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSR-FVKKS 256
F W LF+ + + DLV + L+ L ++ F N I + R + S
Sbjct: 175 FNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLI-------FANAIICPNRRDLLNPS 227
Query: 257 NKGVD----------------LIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEA 299
KG+ +IA LC ++D + + I E I+ + +K
Sbjct: 228 FKGLPSDFPNADFRAPEEPPCIIAILCELHDGLLVEAKGIKEHYFKPYISKLFDRK---- 283
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDS 359
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 284 ---------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD-- 326
Query: 360 LLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG---ATSKMV 416
A G RKF +P+ +T+ ++S + + G + V
Sbjct: 327 ----------AEEEIGTPRKFTG-DTPLGKLTA----QKTSFAPSTPLTGRRYLREKEAV 371
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ G
Sbjct: 372 ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIV----------KG 421
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 422 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 481
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 482 QDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMV 540
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLNS+EE++LES+ W S+++ +L + A+ +P+ + + NF
Sbjct: 541 KHLNSIEEQILESLAWSHDSALWEALQTS--------------ANKVPTCEEVIFPNNFE 586
Query: 654 SG 655
+G
Sbjct: 587 TG 588
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 52/286 (18%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ A +P G + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 751 PKQTYLAKAQEVHPTGISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 810
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 811 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 870
Query: 838 FV--------------------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPL 872
+ D A + SG ++ D+I FYN ++V VK
Sbjct: 871 LLRKEIVAYSKKINGDFEMTDSDLEEAIKTPDCSSGPVREERGDLIKFYNTVYVGRVKSF 930
Query: 873 LVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPL 930
A+K + +S +H + P P SP FP + SP+++S H+VYVSP
Sbjct: 931 ---------ALKYD-LSNQDHMMEAP-PLSP----FPHIKQQPGSPRRISQQHSVYVSP- 974
Query: 931 RTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
K + ++ S Y G SPSK L DIN+ + +
Sbjct: 975 --HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1011
>gi|355756774|gb|EHH60382.1| Retinoblastoma-related protein 2 [Macaca fascicularis]
Length = 1139
Score = 139 bits (351), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 148/629 (23%), Positives = 273/629 (43%), Gaps = 83/629 (13%)
Query: 17 NAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFW 76
N + R +LC+ L++DE E +R + + + GN + W
Sbjct: 38 NESPTPQIQQRFDELCRR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HW 86
Query: 77 FAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPIL 135
A LY+ R K+ + +G+ N +L IL+ + ++++FF ++ ++
Sbjct: 87 LACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW-------- 135
Query: 136 SNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG-- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 136 EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPC 195
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFR 242
+S+ F W+LF+ + + DLV + L+ L ++ + V F+
Sbjct: 196 TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNSNFK 255
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+ ++ K S+ +I LCS++D + + I E I + +KK + E
Sbjct: 256 GLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE 315
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 316 ---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEE 361
Query: 361 ---------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 362 IGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYI 409
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 410 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 468
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 469 ------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 521
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 522 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCR 580
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 581 EVVKHLNQIEEQILDHLAWKPESPLWEKI 609
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|73949852|ref|XP_535303.2| PREDICTED: retinoblastoma-like protein 2 isoform 1 [Canis lupus
familiaris]
Length = 1139
Score = 139 bits (351), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 150/622 (24%), Positives = 275/622 (44%), Gaps = 84/622 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 45 TQQRFDELCSR-LNMDEAARAEAWDSYRN----MSESYTLEGNDL------HWLACALYV 93
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L ILR + ++++FF ++ ++ ++
Sbjct: 94 ACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLP 142
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHR 199
R + L+ NF +++ K Y+ I+++ F P + +Q +S+
Sbjct: 143 PHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEVFH 202
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDS 249
F W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 203 FCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFH 262
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
++ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 263 AKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLT 319
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED--------DSL 360
++ + S + K Y+ + G LDER+F+ +D
Sbjct: 320 G-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGDDAEEEIGTLSKC 368
Query: 361 LGSGSLSGGAVNITGA---KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
L SGS + A + ++ FD S I++PL+ G+ + V
Sbjct: 369 LNSGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYMKDNSPCV 416
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVSTA + L T++ L + PS +LE+ L++C +D T + R + E I+
Sbjct: 417 TPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYE-IYSQHCQ 475
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
+ + S + I ++ R + LYY+VLE++ E + L +L+ +L + F
Sbjct: 476 PDEDFSNSKE-------IASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAF 527
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
HR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 528 HRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLN 586
Query: 598 SLEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S +++ +
Sbjct: 587 QIEEQILDHLAWKPESPLWDRI 608
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 52/283 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 833 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 892
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 893 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 952
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
R+ +D ++ + + VP + P L A + M+ ++ +NN
Sbjct: 953 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1012
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 1013 IKQIKTFAMKYSQANIMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSP 1069
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1070 REKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|297698736|ref|XP_002826465.1| PREDICTED: retinoblastoma-like protein 2 [Pongo abelii]
Length = 1139
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----ISESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 SWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|355710195|gb|EHH31659.1| Retinoblastoma-related protein 2 [Macaca mulatta]
Length = 1139
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 148/629 (23%), Positives = 273/629 (43%), Gaps = 83/629 (13%)
Query: 17 NAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFW 76
N + R +LC L++DE E +R + + + GN + W
Sbjct: 38 NESPTPQIQQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HW 86
Query: 77 FAFVLYLVRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPIL 135
A LY+ R K+ + +G+ + N +L IL+ + ++++FF ++ ++
Sbjct: 87 LACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW-------- 135
Query: 136 SNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG-- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 136 EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPC 195
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFR 242
+S+ F W+LF+ + + DLV + L+ L ++ + V F+
Sbjct: 196 TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNCNFK 255
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+ ++ K S+ +I LCS++D + + I E I + +KK + E
Sbjct: 256 GLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE 315
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 316 ---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEE 361
Query: 361 ---------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 362 IGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYI 409
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 410 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 468
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 469 ------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 521
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 522 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCR 580
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 581 EVVKHLNQIEEQILDHLAWKPESPLWEKI 609
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|383420483|gb|AFH33455.1| retinoblastoma-like protein 2 [Macaca mulatta]
gi|384948592|gb|AFI37901.1| retinoblastoma-like protein 2 [Macaca mulatta]
Length = 1141
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 148/629 (23%), Positives = 272/629 (43%), Gaps = 83/629 (13%)
Query: 17 NAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFW 76
N + R +LC L++DE E +R + + + GN + W
Sbjct: 38 NESPTPQIQQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HW 86
Query: 77 FAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPIL 135
A LY+ R K+ + +G+ N +L IL+ + ++++FF ++ ++
Sbjct: 87 LACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW-------- 135
Query: 136 SNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG-- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 136 EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPC 195
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFR 242
+S+ F W+LF+ + + DLV + L+ L ++ + V F+
Sbjct: 196 TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNCNFK 255
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+ ++ K S+ +I LCS++D + + I E I + +KK + E
Sbjct: 256 GLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE 315
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 316 ---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEE 361
Query: 361 ---------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 362 IGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYI 409
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 410 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 468
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 469 ------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 521
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 522 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCR 580
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 581 EVVKHLNQIEEQILDHLAWKPESPLWEKI 609
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 53/284 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSE-QDHVDII 858
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ SG S+ + H +
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 859 TFYNK-----------------IFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN- 895
T NK + VP + P L A + M+ ++ +NN
Sbjct: 954 TELNKDRTASRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNI 1013
Query: 896 -------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALIS 940
+P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 1014 YIKQIKTFAMKYSQANVMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLS 1070
Query: 941 HSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1071 PREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1107
>gi|327276415|ref|XP_003222965.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Anolis carolinensis]
Length = 1116
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 148/623 (23%), Positives = 272/623 (43%), Gaps = 85/623 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T R +LC + L++DE E F+ + N + GN + W A LY+
Sbjct: 39 TRQRYEELC-SSLNMDERARAEAWLSFQSMRR----NYTLEGNDL------HWLACALYV 87
Query: 84 VRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K + +G+ + N +L ILR ++++FF ++ ++ ++
Sbjct: 88 ACR---KAVPTVSRGTVEGNYVSLIRILRCSGQSLIEFFNKMKKW--------EDMANLP 136
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSD--ANGDKQSAAASTSGYISDYHR 199
+ R L+ NF +++ K Y+ I+++ F P D + +S+ +
Sbjct: 137 SQFRERTTRLERNFTVSAVIFKKYEPIFQDIFKYPQDDPPRQQRGRKQRRQPCTVSEVFQ 196
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVP-------VRFRNFNIHDS 249
F W+LF+ + + DLV + L+ +L ++ + P F+
Sbjct: 197 FCWVLFVYAKGNFPMISDDLVNSYHLLLCVLDLVYANSLQCPNHKDLLNPSFKGLPEDFQ 256
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLE 308
S+ K ++ +I LCS++D + + I E + + +KK + E ENL
Sbjct: 257 SKDFKLLSEPPCIIEKLCSLHDGLLLEAKGIKEHFWKPYVRRLFEKKILKGKE---ENLA 313
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLG----- 362
+D + SL + K Y+ + G LDER+F+ ED D +G
Sbjct: 314 G-----------FLDPGNFGESLKNINKAYEEYILSVGNLDERIFLGEDADEEIGTLRRC 362
Query: 363 ----SGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
SG + V + ++ A + I++PL+ G + V+
Sbjct: 363 LNTTSGVETAERVQVKHNLQEHFERAKSFR-ISTPLT----------GRKYIKEREACVS 411
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
P+S A L T++ L + PS LE+ +SC +D + + R + E
Sbjct: 412 PISIATYNLTRLHTMLTGLKNAPSENLEQIFRSCSRDPSLSISNRVKEMYEIY------- 464
Query: 479 ERCVTGSLQG--ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
C QG + +I + L + LYY+VLE++ E + L +L+++L ++
Sbjct: 465 --CQKTQSQGDPDSFSKDIVGKHFHLAEV-LYYKVLESVIEQEKKRLGDVDLSAILEHDV 521
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
FHR ++AC E+++ ++K FP + + + AF KVIE IR E+ L RE+ +HL
Sbjct: 522 FHRSLMACCLEIIIYSYKAADS-FPFITDIFDVPAFHFYKVIEILIRAEDGLCREVVKHL 580
Query: 597 NSLEERLLESMVWEKGSSMYNSL 619
N +EE++LES+ W++ S ++ +
Sbjct: 581 NHIEEQILESLAWKEESPLWEKI 603
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 131/284 (46%), Gaps = 56/284 (19%)
Query: 728 RPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRT 787
+P G G ++ + +FF K+ LA+VR+ + +L +S ++R+ ++ F+ L Q +
Sbjct: 813 KPQAGSGIKSRKTGSLMLFFRKVFHLASVRLRDLCLKLDISDELRKKIWTCFEFSLVQCS 872
Query: 788 SLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS 847
L +RH+DQ+++C Y ++K+++ + +F+ I+ YR QPQ K V+RSV + R S
Sbjct: 873 DLMMDRHLDQLLMCAIYIISKVTKEDTSFQNIMRFYRTQPQAKSHVYRSVLIKGRRRRYS 932
Query: 848 GRSEQDHVD----------------IITFYNKIFVPAVKPLLVELGPA------------ 879
G +E ++ + + +P +P P
Sbjct: 933 GNAESNNQQNSPTEKNKDRTSRDSSPVMMRSSSTLPVPQPSSAPPTPTRLIGAKSEEEEE 992
Query: 880 ---GTAMK------TNRVSEV----NHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHN 924
G ++ T+R+ + + +N G P +S +P + SP+++ S H
Sbjct: 993 EERGDLIRFYNNVYTDRIKDFALKYSSSNTGEAP---PLSPYPFVRSGSPRRIQLSQNHK 1049
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+Y+SP K ++ +S K +Y + SPSK L +IN
Sbjct: 1050 IYISP---HKNESALSPREKIFY-------YFSSSPSKRLQEIN 1083
>gi|149043121|gb|EDL96695.1| rCG32239, isoform CRA_a [Rattus norvegicus]
Length = 984
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 139/544 (25%), Positives = 241/544 (44%), Gaps = 74/544 (13%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L ILR KL+++ FF ++ +++ +SN+ ++ R+E L+ NF ++
Sbjct: 4 NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTV 55
Query: 162 LSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSR 215
+ K ++ I+ + F LP KQ + + D F W LF+ + +
Sbjct: 56 IFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMI 112
Query: 216 FKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIAS 265
DLV + L+ L ++ I P R F+ + K + + +IA
Sbjct: 113 GDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFKAAEEPPCIIAV 172
Query: 266 LCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDD 324
LC ++D + + I E I+ + KK ++ E L+D
Sbjct: 173 LCDLHDGLLVEAKGIKEHYFKPYISKLFDKK-------------------ILKGECLLDL 213
Query: 325 SSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLA 384
SS + + + K+Y+ G+ DER+F+ D G A +F L
Sbjct: 214 SSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------AEEEIGTPRKFAADTQFGKLT 267
Query: 385 SPVKTITSPLSPH----RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLP 438
S ++ L H RS A S P G + V TPV++A + L++++ L
Sbjct: 268 SQA-SVDCNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLK 326
Query: 439 SKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI--- 495
S PS +L +SC ++ ++++ G+GE Q +
Sbjct: 327 SAPSEQLLTIFESCMRNPMGNIVKIV----------KGIGETFCQHYTQSTDKQPGSHID 376
Query: 496 WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT 555
+A R A LYY++LE + E + LH +++ LL + FHR +LAC E+VL + +
Sbjct: 377 FAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSS 436
Query: 556 VTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 615
FP +++ G+ F KVIE IR EE L R++ +HLNS+EE++LES+ W S++
Sbjct: 437 -PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSAL 495
Query: 616 YNSL 619
+ +L
Sbjct: 496 WEAL 499
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 135/277 (48%), Gaps = 52/277 (18%)
Query: 727 TRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
T+ P G TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L
Sbjct: 691 TQDAPLTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVH 750
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF------- 838
L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 751 CPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGE 810
Query: 839 --------------VDWASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
++ A+ + SE ++ D+I FYN I+V VK
Sbjct: 811 VVAYNGDYEMTDGDIEDATKTPNCSSEPVKEERGDLIKFYNAIYVGRVKSF--------- 861
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALI 939
A+K + +S +H D P P SP FP + SP+++S H++YVSP + + + +
Sbjct: 862 ALKYD-LSNQDHIMDAP-PLSP----FPHIKQQPGSPRRISQQHSIYVSPHKNA---SGL 912
Query: 940 SHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+ S Y G SPSK L DIN+ + +
Sbjct: 913 TPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 942
>gi|338723332|ref|XP_001492739.3| PREDICTED: retinoblastoma-like protein 2 [Equus caballus]
Length = 1145
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 139/570 (24%), Positives = 253/570 (44%), Gaps = 72/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 91 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW------- 140
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 141 -EDMANLPQHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 199
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 200 CTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 259
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 260 KGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 319
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 320 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 365
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 366 EIGTLSRCLNTGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 413
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 414 IKDNSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYE 473
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 474 -------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 525
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP V E + + KVIE FIR E+ L
Sbjct: 526 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFVTEIFDVPLYHFYKVIEIFIRAEDGLC 584
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 585 REVVKHLNQIEEQILDHLAWKPESPLWDRI 614
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 52/283 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 839 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 898
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 899 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 958
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
R+ +D ++ + + VP + P L A + M+ ++ +NN
Sbjct: 959 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1018
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 1019 IKQIKTFAMKYSQANVMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSP 1075
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1076 REKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1111
>gi|149043122|gb|EDL96696.1| rCG32239, isoform CRA_b [Rattus norvegicus]
Length = 835
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 139/544 (25%), Positives = 241/544 (44%), Gaps = 74/544 (13%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L ILR KL+++ FF ++ +++ +SN+ ++ R+E L+ NF ++
Sbjct: 4 NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRERIE--RLERNFEVSTV 55
Query: 162 LSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSR 215
+ K ++ I+ + F LP KQ + + D F W LF+ + +
Sbjct: 56 IFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMI 112
Query: 216 FKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIAS 265
DLV + L+ L ++ I P R F+ + K + + +IA
Sbjct: 113 GDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFKAAEEPPCIIAV 172
Query: 266 LCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDD 324
LC ++D + + I E I+ + KK ++ E L+D
Sbjct: 173 LCDLHDGLLVEAKGIKEHYFKPYISKLFDKK-------------------ILKGECLLDL 213
Query: 325 SSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLA 384
SS + + + K+Y+ G+ DER+F+ D G A +F L
Sbjct: 214 SSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------AEEEIGTPRKFAADTQFGKLT 267
Query: 385 SPVKTITSPLSPH----RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLP 438
S ++ L H RS A S P G + V TPV++A + L++++ L
Sbjct: 268 SQA-SVDCNLQQHFEKKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLK 326
Query: 439 SKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI--- 495
S PS +L +SC ++ ++++ G+GE Q +
Sbjct: 327 SAPSEQLLTIFESCMRNPMGNIVKIV----------KGIGETFCQHYTQSTDKQPGSHID 376
Query: 496 WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT 555
+A R A LYY++LE + E + LH +++ LL + FHR +LAC E+VL + +
Sbjct: 377 FAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSS 436
Query: 556 VTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSM 615
FP +++ G+ F KVIE IR EE L R++ +HLNS+EE++LES+ W S++
Sbjct: 437 -PRTFPWIIDVLGLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSAL 495
Query: 616 YNSL 619
+ +L
Sbjct: 496 WEAL 499
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 727 TRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQ 785
T+ P G TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L
Sbjct: 691 TQDAPLTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVH 750
Query: 786 RTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 751 CPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLL 804
>gi|348541737|ref|XP_003458343.1| PREDICTED: retinoblastoma-like protein 2 [Oreochromis niloticus]
Length = 1188
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 155/638 (24%), Positives = 277/638 (43%), Gaps = 96/638 (15%)
Query: 20 DNDATEAR--LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWF 77
D A AR +LC+ L++DE E + + NIS N E +E W
Sbjct: 110 DETAQRARRGFEELCR-ALNMDEEASGEAWRSYE--------NISR--NFTLEGSELHWL 158
Query: 78 AFVLYLVRRLSEKN-GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILS 136
A LY+ R S G+ +G N +L ILR ++++++FF ++ ++
Sbjct: 159 ACALYVACRSSVPTVGKGTAEG---NYVSLTRILRCSEMSLIEFFSKMKKW--------Q 207
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDA-----NGDKQSAAAST 190
++ + R +L+ NF+ +++ K Y I++ F PS+ KQ T
Sbjct: 208 DMADLPPDFRQSTDKLERNFIVSAVIFKKYVPIFKSIFRAPSEEPPRVHRSRKQRRHPCT 267
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFK----DLVTCTNGLVSILAILIIHVPV------- 239
+++ F W+LF +HA F DLV + L+ L ++ + +
Sbjct: 268 ---VTEVFNFCWVLF----VHAKGNFPMISDDLVNSYHLLLCALDLVFTNALLCNARKDL 320
Query: 240 ---RFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKK 295
F+ ++ + ++ + LC ++D + + + E I + K+
Sbjct: 321 LNPEFKGLPEDFGTKDFRPASGPFCFMEQLCRLHDGLVLEAKGVKEHFWKPFIKKLFHKR 380
Query: 296 PCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN 355
E D L F +D + SL L + Y+ G LDER+F
Sbjct: 381 ILRGKE-----------DSLTGF---LDPMNFGDSLLALSRLYEEHVLATGSLDERIFTG 426
Query: 356 E---DDSLLGSGSLSGGAVNITGAKRKFDS-------LASPVKTITSPLSPHRSSASHPN 405
E +D L GA N A + + LAS +K +++PL+ +
Sbjct: 427 EGASEDIGTPGPCLCEGAENQDSATFRLHTSLAVRPDLASALK-VSTPLTGRKY------ 479
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAH 465
+ G+ + +P+S+AM + L T++ PSA+L L+SC +D + + +R +
Sbjct: 480 -VQEGS----LASPLSSAMKSVGRLHTLLSGTKQGPSAKLAETLRSCARDPSDAISQRLN 534
Query: 466 IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHA 525
+ + + + G+ + A + A LYYR+LE++ E +L
Sbjct: 535 DMFDV------FSQHYEDDAADGSRAIGKDIAVKYFHLAQALYYRILESVIEREKMILGD 588
Query: 526 KNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHE 585
+L+ +L + FHR +LAC E+V+ +++ FP VL + A+ KVIE +R E
Sbjct: 589 ADLSCILEQDIFHRSLLACCLEIVIFSYRPPGD-FPNVLGIFQLPAYHFYKVIEVLVRAE 647
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
+ L RE+ +HLN +EE++LES+ W S ++ SL A+
Sbjct: 648 QGLFREVVKHLNQVEEQVLESLAWTGDSPLWESLRGAK 685
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 57/287 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+++FF K+ LA+VR+ + RL + ++R ++ F+ L T + +RH+DQ+++C
Sbjct: 875 LSLFFRKVYHLASVRLRDLCTRLDIMPELRRKIWTCFEYSLVHCTDMMMDRHLDQLLMCA 934
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE--------QD- 853
Y +AK+++ + +F+ I+ YR QPQ V+RSV + R S ++ QD
Sbjct: 935 VYVMAKVTKEDRSFQNIMKCYRSQPQASSNVYRSVLISGRRRRHSSTNKPNPPTDGGQDA 994
Query: 854 ---HVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN----------------HN 894
V + + +P +P P T+ KT+ S N +N
Sbjct: 995 ACGDVSPVPIRSSSTLPTPQPGSAPSTPTNTSNKTSCTSTANAGEEEQEEERGDLIHFYN 1054
Query: 895 N---------------DGPCPG--SPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKM 935
N + P G +P + +P+L SP+++ S+ H++Y+SP +
Sbjct: 1055 NVYIKQMTPFALKYSPNSPSAGVDTPPLCPYPSLRTGSPRRMLLSSKHSIYISPHKAGSA 1114
Query: 936 DALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRG 979
+L++ K YY + SP L +IN + + R RG
Sbjct: 1115 PSLMTPREKIYY-------YICSSPPNRLQEINSMIRTGETPTRKRG 1154
>gi|410983523|ref|XP_003998088.1| PREDICTED: retinoblastoma-like protein 2 [Felis catus]
Length = 1265
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 253/570 (44%), Gaps = 71/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 211 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLLEFFHKMKKW------- 260
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 261 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 319
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 320 CTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 379
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 380 KGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 439
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + + S + K Y+ + G LDER+F+ ED
Sbjct: 440 E---ENLTG-----------FLEPGNFAESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 485
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ R
Sbjct: 486 EIGTLSRCLNTGSGAEAADRVQMKAILQQHFDK--SKALRISTPLTGVRYVVKD------ 537
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 538 ---NSPCVTPVSTATHSLSRLHTMLTGLKNTPSEKLEQILRTCSRDPTQAIANRLKEMYE 594
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
S E +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 595 IYSQHSQPDE-------DFSNSTKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 646
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L
Sbjct: 647 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLC 705
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 706 REVVKHLNQIEEQILDHLAWKPESPLWDRI 735
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 960 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 1019
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 1020 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 1079
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 1080 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1139
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H +Y+SP K +
Sbjct: 1140 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPIYISP---HKNET 1191
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1192 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1231
>gi|21759787|gb|AAH34490.1| Retinoblastoma-like 2 (p130) [Homo sapiens]
Length = 1139
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDIN---HRLNSNRRVRGTL 981
++S K +Y + SPSK L +IN H + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIHTGETPTKKRGIL 1105
>gi|426382185|ref|XP_004057695.1| PREDICTED: retinoblastoma-like protein 2 [Gorilla gorilla gorilla]
Length = 1139
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+ S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|432952925|ref|XP_004085246.1| PREDICTED: retinoblastoma-like protein 1-like, partial [Oryzias
latipes]
Length = 882
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 183/764 (23%), Positives = 320/764 (41%), Gaps = 134/764 (17%)
Query: 11 SNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPE 70
S++SES + + L LC+ L++DE T E + N ++I N
Sbjct: 6 SSDSESGRMEESSVRRSLEVLCQE-LNMDEQTASEAMD-----------NFTSIWNTYTL 53
Query: 71 EAERF-WFAFVLYLVRRLSEKN--GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQF 127
E E W A LY R G+ L +G N +L ILR KL+++ FF ++ ++
Sbjct: 54 EGEVVHWLACSLYAACRKGSTPTVGKGLMEG---NCVSLTRILRCSKLSLIQFFSKMRKW 110
Query: 128 LVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGDKQSA 186
+++ + RL L+ NF +++ + ++ I+ + F P + +Q
Sbjct: 111 --------ADMSNLSQDFRLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGSEPPRQPR 162
Query: 187 AAS---TSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH------- 236
+ +ISD +F W LF+ + + DLV + L+ L ++ +
Sbjct: 163 SRKHRRLPCHISDVFKFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANR 222
Query: 237 ----------VPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-N 285
+P ++R + H V ++ LC ++D + + I +
Sbjct: 223 KDLINPTFRGLPPQYRA-DCH-----VVPDEPPPCVLERLCELHDGLVVEAKGIRQHYFR 276
Query: 286 TLIADILKKKPCEAS-ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRN 344
I + +++ + E +E L+ +N +D++ + ++Y+
Sbjct: 277 PYIQKLFQRQILRGNQELLTEMLDP---------QNFIDNN------KAVNREYEEYVLT 321
Query: 345 KGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHP 404
G+ DERVF+ D A G RK S + P + S P
Sbjct: 322 VGDFDERVFLGAD------------ADEEIGTPRKVLPDRSAGQMQQHREKPASLAPSTP 369
Query: 405 NGIAGGATSK-MVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR 463
G K ++VTPVS+A + L++++ L + PS L + ++C +D T V+ R
Sbjct: 370 LTGRGYLKEKDLLVTPVSSATQSVSRLQSMVAGLRTAPSENLMQIFRTCSRDPTGSVLAR 429
Query: 464 AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVL 523
+ + GS +D +AE R A LYY+VLE + E + L
Sbjct: 430 VKTLGQTFKEHYTNDSEDTPGSH-----ID--FAENRLKLAEILYYKVLENVLVQETKRL 482
Query: 524 HAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIR 583
+++++LL + FH ++AC E+VL ++ + FP +++ + F KVIE FIR
Sbjct: 483 QGRDMSALLEQDIFHCSLMACCLEVVLFSYSS-QRTFPWIIDVFKLAPFYFFKVIEVFIR 541
Query: 584 HEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSL 643
EE L R++ +HLNS+EE++LES W + S+++++L A + +PS+
Sbjct: 542 SEEGLSRDMVKHLNSIEEQVLESRAWTEDSALWSALKAA--------------GNEVPSV 587
Query: 644 DAIATHINF-------SSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR-----SVLV 691
+ +NF SS G+ P L H SP + IR + R S L
Sbjct: 588 E----EVNFSSCLDSGSSNGIQPHLPLAAH--SPIIHPRIREFRAGLGSARKEVPPSPLS 641
Query: 692 ERNNFTSP----VKDRLLGLNNLKSKPLPPPLQSAFASPTRPNP 731
+ ++SP K RL G + PP SP P P
Sbjct: 642 VHDRYSSPAAGSAKRRLFGDD-------PPAPSVGLTSPAGPLP 678
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 710 LKSKPLPPPLQSAFASPTRPNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLS 768
L S P P +A A T P G G TG + +FF K+ LA+VR+ + +L +S
Sbjct: 734 LTSSPSRP--AAAVAMTTEPYTGSGRPR--RTGSLALFFRKVYHLASVRLRDLCMKLDVS 789
Query: 769 QQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQ 828
++R ++ F+ L T L NRH+DQ++LC Y ++KI++ TF++I+ YR QPQ
Sbjct: 790 SELRGKIWTCFEHSLVHCTDLMKNRHLDQLLLCSIYIISKITKETHTFQDIMKCYRSQPQ 849
Query: 829 CKPQVFRSVFV 839
V+RSV +
Sbjct: 850 ASSYVYRSVLI 860
>gi|60654389|gb|AAX29885.1| retinoblastoma-like 2 [synthetic construct]
Length = 1140
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDIN---HRLNSNRRVRGTL 981
++S K +Y + SPSK L +IN H + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIHTGETPTKKRGIL 1105
>gi|114662486|ref|XP_523371.2| PREDICTED: retinoblastoma-like protein 2 isoform 7 [Pan
troglodytes]
Length = 1139
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 89/301 (29%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS-----GRS----- 850
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++ GRS
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDGRSHQNSP 953
Query: 851 ---------------------------------------------EQDHVDIITFYNKIF 865
E++ D+I FYN I+
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 866 VPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATH 923
+ +K AMK ++ N D P P SP +P + SP+++ S H
Sbjct: 1014 IKQIKTF---------AMKYSQA-----NMDAP-PLSP----YPFVRTGSPRRIQLSQNH 1054
Query: 924 NVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGT 980
VY+SP K + ++S K +Y + SPSK L +IN + + + RG
Sbjct: 1055 PVYISP---HKNETMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGI 1104
Query: 981 L 981
L
Sbjct: 1105 L 1105
>gi|345319489|ref|XP_001520195.2| PREDICTED: retinoblastoma-like protein 2 [Ornithorhynchus anatinus]
Length = 1074
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 154/644 (23%), Positives = 273/644 (42%), Gaps = 92/644 (14%)
Query: 69 PEEAERFWFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQF 127
P+ + W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 22 PKGNDLHWLACALYVACR---KSVPTVSRGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW 78
Query: 128 LVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANG 181
++ R + L+ NF +++ K ++ I+++ F P G
Sbjct: 79 --------EDMANLPERFRERTERLERNFTVSAVIFKKFEPIFQDIFKYPQEEQPRPPRG 130
Query: 182 DKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVP 238
KQ T +S+ F W+LF+ + + DLV + L+ L ++ +
Sbjct: 131 RKQRRQPCT---VSEVFHFCWVLFVYAKGNFPMISDDLVNSYHLLLCALDLVYGNAVQCS 187
Query: 239 VR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIAD 290
R F+ ++ K S++ +I LCS++D + + I E I
Sbjct: 188 NRRELLNPNFKGLPEDFQNKDSKPSSEPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRK 247
Query: 291 ILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDE 350
+ KK + E + L F +D + S+ + K Y+ + G LDE
Sbjct: 248 LFDKKLLKGKE-----------ESLTGF---LDPGNFGDSVKAINKAYEEYVLSVGNLDE 293
Query: 351 RVFINED-DSLLG---------SGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRS 399
R+F+ ED + +G SG S V++ + ++ FD S V I +PL+
Sbjct: 294 RIFLGEDAEEEIGTLTRCLNTSSGMESAERVHVKYSLQQHFDR--SKVFRIATPLT---- 347
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
G S VTP+S A + L T++ L + PS LE+ L++C +D +
Sbjct: 348 ------GRNYIKESSPYVTPISIATHSLSRLHTMLKGLKNAPSENLEQILRACSRDPSQS 401
Query: 460 VMRRAHIILEAIFPSSGLGERCVTGSLQG--ANLMDNIWAEQRRLEALKLYYRVLEAMCT 517
+ R + E C G + I ++ RL + LYY+VLE++
Sbjct: 402 IANRLKEMYELY---------CQHSQADGDFGSCAREIESKHFRLAEV-LYYKVLESVLE 451
Query: 518 AEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKV 577
E + L +L+ +L + FHR +LAC E++ ++K FP + E + + KV
Sbjct: 452 QERKRLGDTDLSGILEQDAFHRSLLACCLEIITFSYKPPGN-FPLITEIFDVPLYHFYKV 510
Query: 578 IESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL----------TVARPVLS 627
IE FIR E+ L RE+ +HLN +EE++L+ M W+ S +++ + P +
Sbjct: 511 IEVFIRAEDGLCREVVKHLNHIEEQILDHMAWKPDSPLWDRIRDNENKVPTCEEVMPPQN 570
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPG 671
E G+ PM G S SL++ +SP
Sbjct: 571 LERGDGGVAGSPMTPRRVTEVRAETGGPGRSSPTSLYERYSSPA 614
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 134/283 (47%), Gaps = 52/283 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA+VR+ + +L++S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 768 SSLSLFFRKVYHLASVRLRDLCAKLEISDELRKKIWTCFEFSVVQYPELMRDRHLDQLLM 827
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 828 CAIYVMAKVTKDDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRRRRNSGSSDSRSHQNSP 887
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVEL-GPAGTAMKTNRVSEVNHNND-- 896
R+ +D ++ + + VP + P L GP + R + N+
Sbjct: 888 TEMNRERTSRDSSPVMRSSSTLPVPQPNSAPPTPTRLTGPNSDVEEEERGDLIQFYNNIY 947
Query: 897 -------------GPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S FP + SP+++ S H+VY+SP K ++++S
Sbjct: 948 IEQIRTFALKYSQANSAEAPPLSPFPFVRTGSPRRIQLSQNHSVYISP---HKNESMLSQ 1004
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K YY + SPSK L +IN + + + RG L
Sbjct: 1005 REKIYY-------YFSSSPSKRLREINSMIRTGETPTKKRGIL 1040
>gi|410227572|gb|JAA11005.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410267036|gb|JAA21484.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410298828|gb|JAA28014.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410353057|gb|JAA43132.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
Length = 1139
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 89/301 (29%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS-----GRS----- 850
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++ GRS
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDGRSHQNSP 953
Query: 851 ---------------------------------------------EQDHVDIITFYNKIF 865
E++ D+I FYN I+
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 866 VPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATH 923
+ +K AMK ++ N D P P SP +P + SP+++ S H
Sbjct: 1014 IKQIKTF---------AMKYSQA-----NMDAP-PLSP----YPFVRTGSPRRIQLSQNH 1054
Query: 924 NVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGT 980
VY+SP K + ++S K +Y + SPSK L +IN + + + RG
Sbjct: 1055 PVYISP---HKNETMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGI 1104
Query: 981 L 981
L
Sbjct: 1105 L 1105
>gi|172072597|ref|NP_005602.3| retinoblastoma-like protein 2 [Homo sapiens]
gi|116242746|sp|Q08999.3|RBL2_HUMAN RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=Retinoblastoma-related protein 2; Short=RBR-2;
AltName: Full=pRb2
gi|453132|gb|AAB29227.1| p130 [Homo sapiens]
gi|119603208|gb|EAW82802.1| retinoblastoma-like 2 (p130), isoform CRA_b [Homo sapiens]
gi|739073|prf||2002264A Rb-related p130 protein
Length = 1139
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|301758727|ref|XP_002915215.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Ailuropoda melanoleuca]
Length = 1151
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 142/583 (24%), Positives = 257/583 (44%), Gaps = 95/583 (16%)
Query: 76 WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 141 WLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD---- 193
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAA 187
+SN+ ++ R+E L+ NF +++ K ++ I+ + F P KQ
Sbjct: 194 -MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPFEEPPKLPRSRKQRRI 249
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR---- 240
+ + D F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 250 PCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLL 306
Query: 241 ---FRNF--NIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKK 294
F+ N H + + S + +IA LC ++D + + I E I+ + +
Sbjct: 307 NPSFKGLPPNFHTAD--FRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDR 364
Query: 295 KPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFI 354
K ++ E L+D SS + + + K+Y+ G+ DER+F+
Sbjct: 365 K-------------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 405
Query: 355 NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP------LSPH--RSSASHPNG 406
D A G RKF +P+ +T+ L H + ++ P+
Sbjct: 406 GAD------------AEEEIGTPRKFTG-DTPLGKLTTQANVDCNLQQHFEKKTSFAPST 452
Query: 407 IAGGA----TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMR 462
G + V+TPV++A + +++++ L + PS +L +SC ++ ++ +
Sbjct: 453 PLTGRRYLREKEAVITPVASATQSVSRIQSIVAGLKNAPSEQLINIFESCMRNPMENITK 512
Query: 463 RAHIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAE 519
G+GE Q + +A R A LYY++LE + E
Sbjct: 513 IV----------KGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQE 562
Query: 520 AQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 579
+ LH +++ LL + FHR ++AC E+VL + + FP ++E + F KVIE
Sbjct: 563 TRRLHGMDMSVLLEQDIFHRSLMACCLEVVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIE 621
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
IR EE L R++ +HLNS+EE++LES+ W S+++ +L +
Sbjct: 622 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS 664
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 55/289 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 846 PKQTHLTKAQEAHPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 905
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 906 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 965
Query: 838 FV-----------------------DWASARQS-----GRSEQDHVDIITFYNKIFVPAV 869
+ + A ++ G +++ D+I FYN I+V V
Sbjct: 966 LLKSIPREVVAYNKNINGDFEMTDCELEDATKTPDCSNGPVKEERGDLIKFYNTIYVGRV 1025
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H + P P SP FP + SP+++S H++YV
Sbjct: 1026 KSF---------ALKYD-LSNQDHVMEAP-PLSP----FPHIKQQPGSPRRISQQHSIYV 1070
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 1071 SP---HKNGSGLTPRSALLYKFSG-------SPSKSLKDINNMIRQGEQ 1109
>gi|334310911|ref|XP_003339554.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Monodelphis domestica]
Length = 1066
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 148/603 (24%), Positives = 262/603 (43%), Gaps = 97/603 (16%)
Query: 58 LANISAIGNGMPEEAERF-WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + +AI + E E W A LY+ R S G+ + +G N +L ILR K
Sbjct: 39 LGDFTAIRSTYSLEGEVVHWLACALYVACRKSIIPTVGKGVMEG---NCVSLTRILRSAK 95
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ ++ E R L+ NF +++ K ++ I+ + F
Sbjct: 96 LSLIQFFSKMKKWI--------DMSNLSQEFRERIDRLERNFEVSTVIFKKFEPIFLDIF 147
Query: 175 L------PSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ T + D F W LF+ + + + DLV + L+
Sbjct: 148 RNPYEEPPKLQRSRKQRRVPCT---VKDLFNFCWTLFVYTKGNFRMKGDDLVNSYHLLLX 204
Query: 229 ILAILI---IHVPVRFRNFNIHDS----SRF----VKKSNKGVDLIASLCSIYDTSEDDL 277
L + I P + H + S F + S + +IA+LC ++D +
Sbjct: 205 SLDLTFTNAIMCPXXXXILSPHAALGLPSDFHTPDFRVSEEPPCIIATLCELHDGLLVEA 264
Query: 278 RKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEK 336
+ I E I+ + +K ++ E L+D SS + + + K
Sbjct: 265 KGIKEHYFKPYISKLFDRK-------------------ILKGECLLDISSFADNSKAVNK 305
Query: 337 DYDNATRNKGELDERVFINED-DSLLGS-----GSLSGGAV--------NITGAKRKFDS 382
+Y+ G+ DERVF+ D + +GS G + G + N+ K S
Sbjct: 306 EYEEYVLTVGDFDERVFLGADAEEEIGSPQKFTGDIPAGKLIARVHMDCNLQQHFAKKRS 365
Query: 383 LASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPS 442
A ++PL+ R + TPV++A + L+ ++ L + PS
Sbjct: 366 FAP-----STPLTGRRYLRE----------KEAATTPVASATQSVSRLQNIVAGLKNAPS 410
Query: 443 AELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQ 499
+L +SC ++ ++M +I+ G+GE Q + +A
Sbjct: 411 EQLVNIFESCARNPMENIM---NIV-------KGIGEAFCQHYTQSTDEQPGSHIDFAVN 460
Query: 500 RRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML 559
R A LYY++LE + E + LH +++ LL + FHR ++AC E+VL + +
Sbjct: 461 RLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRS- 519
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
FP ++E ++ F KVIE IR EE L R+ +HLNS+EE++LES+ W S+++++L
Sbjct: 520 FPWIIEVLDLSPFYFYKVIEVLIRSEEGLSRDTVKHLNSIEEQILESLAWSSDSALWDAL 579
Query: 620 TVA 622
++
Sbjct: 580 HIS 582
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 60/295 (20%)
Query: 714 PLPPPLQSAFASPTRPNPGGGGET--CAETGIN---------IFFCKINKLAAVRINAMV 762
P+ P+ + S T P + + GIN +F+ K+ LA+VR+ +
Sbjct: 748 PVQIPITAQSLSGTSPKQSHATKAPEVQQAGINRPKKTGSLALFYRKVYHLASVRLRDLC 807
Query: 763 ERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYN 822
+L +S +R ++ F+ L L +RH+DQ++LC FY +AK+++ TF++I+ +
Sbjct: 808 LKLDVSNDLRRKIWTCFEFTLVHCFDLMKDRHLDQLLLCAFYIMAKVTKEERTFQDIMKS 867
Query: 823 YRKQPQCKPQVFRSVFV----------------------DWASAR----QSGRSEQDHVD 856
YR QPQ V+RSV + D A+ +G +++ D
Sbjct: 868 YRNQPQANSHVYRSVLLKRIPVEVSTCNKNVKDTEMIDYDLDCAKIPDSSTGSMKEERGD 927
Query: 857 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSP 916
+I FYN+++V VK A+K + +E N P P + P +SP
Sbjct: 928 LIKFYNEVYVGRVKSF---------ALKYDLSNEENVIEAPPLSPFPNIKQQP----VSP 974
Query: 917 KKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRL 971
+++S H+VYVSP K ++ + Y G SPSK L DIN+ +
Sbjct: 975 RRISQQHSVYVSP---HKNGTCLTPRTALLYKFNG-------SPSKSLKDINNMI 1019
>gi|170932488|ref|NP_035380.3| retinoblastoma-like protein 2 [Mus musculus]
gi|341942165|sp|Q64700.3|RBL2_MOUSE RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=Retinoblastoma-related protein 2; Short=RBR-2;
AltName: Full=pRb2
gi|74213520|dbj|BAE35570.1| unnamed protein product [Mus musculus]
Length = 1135
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 149/619 (24%), Positives = 270/619 (43%), Gaps = 79/619 (12%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 201 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHP 260
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 261 KDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG 317
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGS--L 366
++ + S + K Y+ G LDERVF+ ED + +G+ S L
Sbjct: 318 -----------FLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCL 366
Query: 367 SGGAVNITGAKRKFDSL------ASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
S + + + + + S + +PL+ G+ + VTPV
Sbjct: 367 SAASGTESAERTQMRDILQQHLDKSKALRVCTPLT----------GVRYVQENSPCVTPV 416
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STA + L T++ L + PS +LER L+SC +D T + R + E + +
Sbjct: 417 STAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYE-------IYSQ 469
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
+N I + R + LYY+VLE++ E + L +L+ +L ++ FHR
Sbjct: 470 HFQPDENFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRS 528
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
+LAC E+V +HK FP + E + + KVIE FIR E+ L RE+ +HLN +E
Sbjct: 529 LLACCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIE 587
Query: 601 ERLLESMVWEKGSSMYNSL 619
E++L+ + W+ S +++ +
Sbjct: 588 EQILDHLAWKTKSPLWDRI 606
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 64/292 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 830 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE--------- 851
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE
Sbjct: 890 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSPT 948
Query: 852 --------QDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTN-------------- 886
+D ++ + + VP + P L A + ++
Sbjct: 949 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYR 1008
Query: 887 --------RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMD 936
+ S+ N D +P +S +P + SP++V S +H +Y+SP +
Sbjct: 1009 KQIQAFAMKYSQANAQTD-----TPPLSPYPFVRTGSPRRVQLSQSHPIYISP---HNNE 1060
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
A+ S K +Y + SPSK L +IN + + + RG L DD
Sbjct: 1061 AMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL-LDD 1104
>gi|327271628|ref|XP_003220589.1| PREDICTED: retinoblastoma-like protein 1-like [Anolis carolinensis]
Length = 1026
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 155/596 (26%), Positives = 264/596 (44%), Gaps = 84/596 (14%)
Query: 58 LANISAIGNGMPEEAERF-WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMK 114
L + SA+ E E W A LY+ R S G L +G N +L ILR K
Sbjct: 37 LRDFSALRGTYSLEGETVHWLACALYVACRKSIIPTVGSGLMEG---NCVSLTRILRTAK 93
Query: 115 LNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
L+++ FF ++ +++ +SN+ E R + L+ NF +++ K + I+ + F
Sbjct: 94 LSLIQFFSKMKKWMD-----MSNL---SHEFRERVERLERNFEVSTVIFKKFTPIFLDIF 145
Query: 175 ------LPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVS 228
P KQ ++ D F W LF+ + + DLV + L+
Sbjct: 146 KNPYEEQPKLQRSRKQRRIPCSA---KDLFNFCWTLFVYTKGNFSMIGDDLVNSYHLLLC 202
Query: 229 ILAILIIHVPVRFRNFNIHDSS------RFVKKSNKGVD----LIASLCSIYDTSEDDLR 278
L + + ++ +SS F K ++ + +IA+LC ++D + +
Sbjct: 203 CLDLTFTSALLCPHKIDLLNSSFKGLPEDFHKADSRTFEGPPCIIATLCELHDGLLIEAK 262
Query: 279 KIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKD 337
I E I+ + +K + D L+ N +D++ L K+
Sbjct: 263 GIKEHYFKPYISKLYDRK-------------ILKGDCLLDLNNFLDNN------KALNKE 303
Query: 338 YDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP---- 393
Y+ +G+ DERVF+ D A G +KF + K +T
Sbjct: 304 YEEYVLTEGDFDERVFLGAD------------AEEEIGTPQKFSTDMPSGKVMTRAHVEC 351
Query: 394 -LSPH----RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELE 446
L H RS A S P G + V+TPV++A + L++++ + PS +L
Sbjct: 352 HLQQHFEKKRSFAPSTPLTGRRYLREKEPVITPVASATQSVSRLQSIVAGQKNGPSEQLL 411
Query: 447 RFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALK 506
+SC ++ ++M R I E IF + T G+++ +A R A
Sbjct: 412 IIFESCVRNPIENIMSRVKEIGE-IFCQNYTRS---TDDQPGSHI---DFAVNRLKLAEI 464
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLER 566
LYY++LE + E + LH K++++LL + FH +LAC E+VL + + FP ++E
Sbjct: 465 LYYKILETIMVQEMRRLHGKDMSALLEQDIFHCSLLACCLEIVLFAYSS-PRTFPWIIEV 523
Query: 567 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+ F KVIE IR EE L R+ +HLNS+EE++LES+ W K S+++++L +
Sbjct: 524 LNLRPFYFYKVIEVLIRSEEGLSRDTVKHLNSIEEQILESLAWTKDSALWDALQAS 579
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 38/243 (15%)
Query: 731 PGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLF 790
P G + +FF K+ LA+VR+ + +L +S ++R ++ F+ L T L
Sbjct: 773 PLSGNRPKKTGSLALFFRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFSLVHCTDLM 832
Query: 791 FNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRS 850
+RH+DQ++LC FY +A++S+ TF++I+ +YR QPQ V ++R +
Sbjct: 833 KDRHLDQLLLCAFYIMARVSKEERTFQDIMKSYRNQPQANSHV---------NSRDLEKE 883
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
E+ D+I FYN I++ VK N + + +N +P +S FP+
Sbjct: 884 ERG--DLIKFYNTIYLEKVK---------------NFALKYDASNHDHVVEAPPLSPFPS 926
Query: 911 LPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+ +SP+++S H+VYVSP K + + Y G SPSK L +IN
Sbjct: 927 IKQQPVSPRRISQQHSVYVSP---HKNGVCSTPKTALLYKFNG-------SPSKSLKEIN 976
Query: 969 HRL 971
+ +
Sbjct: 977 NMI 979
>gi|416031|emb|CAA53661.1| 130K protein [Homo sapiens]
gi|739072|prf||2002263A E1A-associated protein gp130
Length = 1139
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARPEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|417405972|gb|JAA49670.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 1139
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 151/624 (24%), Positives = 271/624 (43%), Gaps = 87/624 (13%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ R +LC L++DE E +R + + GN + W A LY+
Sbjct: 45 TQQRFEELCCR-LNMDETARAEAWDSYRSMSQ----SYTLEGNDL------HWLACALYV 93
Query: 84 VRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R K+ + +G+ N +L +LR + ++++FF ++ ++ +
Sbjct: 94 ACR---KSVPTVSKGTVEGNYVSLTRLLRCSEQSLIEFFSKMKKW--------EEMANLP 142
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISD 196
R + L+ NF +++ K Y+ +++E F P G KQ T +S+
Sbjct: 143 QHFRERTERLERNFTVSAVVFKKYEPLFQEIFKYPQEEQPRQPRGRKQRRQPCT---VSE 199
Query: 197 YHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNI 246
F W+LF+ + + DLV + L+ L ++ + R F+
Sbjct: 200 VFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNAVQCSNRKELLNPNFKGLPE 259
Query: 247 HDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSE 305
++ K S+ +I LCS++D + + I E I + +KK + E E
Sbjct: 260 DFLAKDFKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLCEKKLLKGKE---E 316
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGS- 363
NL ++ ++ + + K Y+ + G LDER+F+ ED + +G+
Sbjct: 317 NLTG-----------FLEPANFGENFKAISKAYEEYVLSVGNLDERIFLGEDAEEEIGTL 365
Query: 364 ----GSLSGGAVNITGAKRK-FDSLASPVKTITSPLSPHRSSASHPNGIAGGATSK---M 415
+ SG G R F K + R S + + GG +K
Sbjct: 366 CRCLNTGSGAEAAERGQMRNVFQQHFDKAKAL-------RISTA----LTGGRHTKDNSP 414
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
VTPVS A + L ++ L S P +L++ L++C +D T + R + E S
Sbjct: 415 CVTPVSAATHSRGRLHNMLVGLRSAPGEKLQQILRTCSRDPTQAIANRLKEMSEIYCQHS 474
Query: 476 GLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
E GS +N + + Q R+ + LYY+VLE + E + L +L+++L +
Sbjct: 475 QADE----GS---SNCAKEVASRQFRIAEM-LYYKVLETVTEQEQKRLGDMDLSNILEQD 526
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
FHR ++AC E+V ++K FP + E + + KVIE FIR E+ L RE+ +H
Sbjct: 527 AFHRSLVACCLEVVTFSYKPPGN-FPFITEVFDVPFYHFYKVIEVFIRAEDGLCREVVKH 585
Query: 596 LNSLEERLLESMVWEKGSSMYNSL 619
LN +EE++L+ + W+ S +++ +
Sbjct: 586 LNQIEEQILDHLAWKSESPLWDRI 609
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 84/284 (29%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++F K+ LA VR+ + +L +S +R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFLRKVYHLAGVRLRDLCVKLDISDNLRKKIWTCFEFSIVQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRS--------- 850
C Y +AK+++ + +F+ I+ YR QPQ + Q++RSV + R+ SG S
Sbjct: 894 CAIYVMAKVTKDDKSFQNIMRCYRTQPQARSQIYRSVLIKGKKKRRDSGGSDSRSHQNSP 953
Query: 851 --------------------------------------------EQDHVDIITFYNKIFV 866
E++ D+I FYN I++
Sbjct: 954 TELKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDLEEEERGDLIQFYNNIYI 1013
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHN 924
+K ++ A A +P +S +P + SP+++ S H
Sbjct: 1014 KQIKSFAMKYSQANIA------------------DAPPLSPYPFIRTGSPRRIQLSQNHA 1055
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+Y+SP K D + S K +Y + SP+K L +IN
Sbjct: 1056 IYISP---HKNDTIFSPREKIFY-------YFSNSPAKRLREIN 1089
>gi|296231081|ref|XP_002760993.1| PREDICTED: retinoblastoma-like protein 2 [Callithrix jacchus]
Length = 1140
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 146/621 (23%), Positives = 271/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 47 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 95
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 96 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 144
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 145 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 204
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 205 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 264
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 265 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 321
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 322 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 370
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ G+ + VT
Sbjct: 371 NTGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYVKENSPCVT 418
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D + + R + E +
Sbjct: 419 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPSQAIANRLKEMFE-------IY 471
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 472 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 530
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 531 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 589
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 590 IEEQILDHLAWKPESPLWEKI 610
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 835 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 894
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 895 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 954
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 955 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1014
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP++V S H VY+SP K +A
Sbjct: 1015 IKQIKTFAMKYSQANMDVP-PLSP----YPFIRTGSPRRVQLSQNHPVYISP---HKNEA 1066
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1067 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1106
>gi|402908378|ref|XP_003916920.1| PREDICTED: retinoblastoma-like protein 2 [Papio anubis]
Length = 1139
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 149/629 (23%), Positives = 272/629 (43%), Gaps = 83/629 (13%)
Query: 17 NAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFW 76
N + R +LC L++DE E +R + + + GN + W
Sbjct: 38 NESPTPQIQQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HW 86
Query: 77 FAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPIL 135
A LY+ R K+ + +G+ N +L IL+ + ++++FF ++ ++
Sbjct: 87 LACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW-------- 135
Query: 136 SNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG-- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q A
Sbjct: 136 EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRARKQRRQPC 195
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFR 242
+S+ F W+LF+ + + DLV + L+ L ++ + V F+
Sbjct: 196 TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNSNFK 255
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+ ++ K S+ +I LCS++D + + I E I + +KK + E
Sbjct: 256 GLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE 315
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 316 ---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEE 361
Query: 361 ---------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 362 IGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYI 409
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 410 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 468
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ + +N I ++ R + LYY+VLE + E + L +L+
Sbjct: 469 ------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLECVIEQEQKRLGDMDLSV 521
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 522 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCR 580
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 581 EVVKHLNQIEEQILDHLAWKPESPLWEKI 609
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S +R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDDLRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 953
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 1014 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1065
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1066 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1105
>gi|326931679|ref|XP_003211954.1| PREDICTED: retinoblastoma-like protein 1-like [Meleagris gallopavo]
Length = 982
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 238/539 (44%), Gaps = 72/539 (13%)
Query: 109 ILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKR 168
IL KL+++ FF ++ +++ ++ E R + L+ NF +++ + ++
Sbjct: 2 ILINAKLSLIQFFSKMKKWM--------DMSNVPQEFRERVERLERNFEVSTVIFRKFEP 53
Query: 169 IYREFFL-PSDANGDKQSAAASTSGY--ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNG 225
I+ + F P++ Q + + D F W LF+ + + DLV +
Sbjct: 54 IFLDIFQNPNEETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHL 113
Query: 226 LVSILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSED 275
L+ L ++ I P R F+ + +K S +IA+LC ++D
Sbjct: 114 LLCCLDLVFANAILCPNRRDLLNPSFKGLPADFHAPEMKASEDPPCIIATLCELHDGLLV 173
Query: 276 DLRKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNIL 334
+ + I E I+ + +K ++ E L+D + + + L
Sbjct: 174 EAKGIKEHYFKPYISKLFDRK-------------------ILKGECLLDLCNFTENNKAL 214
Query: 335 EKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKT----- 389
K+Y+ G+ DERVF+ D A G RKF + KT
Sbjct: 215 NKEYEEYVLTVGDFDERVFLGAD------------AEEEIGTPRKFPADLQVGKTAARAH 262
Query: 390 ITSPLSPH----RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSA 443
+ L H RS A S P G + V+TPV++A + L+ ++ L + PS
Sbjct: 263 VECHLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSD 322
Query: 444 ELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLE 503
L +SC + +M R I EA S T L G+++ +A R
Sbjct: 323 LLIAIFESCARSPAESIMNRVREIGEAFCHSYTQP----TDELPGSHI---DFAVNRLKL 375
Query: 504 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAV 563
A LYY++LE + E + LH K++T+LL + FHR ++AC E+VL + + FP +
Sbjct: 376 AEILYYKILETIMVQEMRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSS-PRTFPWI 434
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+E + F KVIE IR EE L R++ +HLNS+EE++LES+ W + S+++ +L +
Sbjct: 435 IEVLDLRPFYFYKVIEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQAS 493
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 47/270 (17%)
Query: 735 GETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNR 793
G +TG + +F+ K+ LA+VR+ + +L +S +R ++ F+ L L +R
Sbjct: 680 GNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDR 739
Query: 794 HIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASAR-------- 845
H+DQ++LC FY +AK+++ TF++I+ +YR QPQ V+RSV + SA
Sbjct: 740 HLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSASVLLERNAN 799
Query: 846 -----------QSGRS-------------EQDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
+SG S ++ D+I FYN ++V VK ++ A
Sbjct: 800 QDVQMTEDSSVKSGNSLGRSAAENSTELGMEERGDLIKFYNAVYVGRVKSFALKYDIANQ 859
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISH 941
+ + P +SP+++S H+VYVSP + S A ++
Sbjct: 860 DHVVISALPIXXXXXXXXXXXXSIKQQP----VSPRRISQQHSVYVSPHKNS---ACLTP 912
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRL 971
+ Y G SPSK L DIN+ +
Sbjct: 913 RTALLYKFSG-------SPSKSLKDINNMI 935
>gi|344241870|gb|EGV97973.1| Retinoblastoma-like protein 1 [Cricetulus griseus]
Length = 984
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 135/550 (24%), Positives = 240/550 (43%), Gaps = 86/550 (15%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L ILR KL+++ FF ++ +++ +SN+ ++ +R+E L+ NF ++
Sbjct: 4 NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRDRIE--RLERNFEVSTV 55
Query: 162 LSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSR 215
+ K ++ I+ + F LP KQ + + D F W LF+ + +
Sbjct: 56 IFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMI 112
Query: 216 FKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIAS 265
DLV + L+ L ++ I P R F+ + K + + +IA
Sbjct: 113 GDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAQEPPCIIAV 172
Query: 266 LCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDD 324
LC ++D + + I E I+ + KK ++ E L+D
Sbjct: 173 LCDLHDGLLVEAKGIKEHYFKPYISKLFDKK-------------------ILKGECLLDL 213
Query: 325 SSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLA 384
SS + + + K+Y+ G+ DER+F+ D A G RKF +
Sbjct: 214 SSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------------AEEEIGTPRKF-AAD 260
Query: 385 SPVKTITSPLSPHRSSASHPNGIAGGATS------------KMVVTPVSTAMTTAKWLRT 432
+P +TS + + H A S + V TPV++A + L++
Sbjct: 261 TPFGKLTSEANVEYNLQQHFEKKPSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQS 320
Query: 433 VICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLM 492
++ L + PS +L +SC ++ ++ + G+GE Q +
Sbjct: 321 IVAGLKNAPSEQLLNIFESCMRNPLENITKIV----------KGIGETFCQHYTQSTDKQ 370
Query: 493 DNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELV 549
+A R A LYY++LE + E + LH +++ LL + FHR ++AC E+V
Sbjct: 371 PGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIV 430
Query: 550 LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
L + + FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W
Sbjct: 431 LFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAW 489
Query: 610 EKGSSMYNSL 619
S+++ +L
Sbjct: 490 SSNSALWEAL 499
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 708 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 767
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 768 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNGDCEMTDGDIED 827
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN I+V VK A+K + +S +H D P
Sbjct: 828 ATKTPNCSSEPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHIVDAP 877
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K + ++ S Y G
Sbjct: 878 -PLSP----FPHIKQQPGSPRRISQQHSIYVSP---HKNGSGLTPRSALLYKFNG----- 924
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 925 --SPSKSLKDINNMIRQGEQ 942
>gi|397148|emb|CAA52671.1| Rb2/p130 protein [Homo sapiens]
Length = 1082
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 253/570 (44%), Gaps = 72/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + N +L IL+ + ++++FF ++ ++
Sbjct: 29 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW------- 78
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 79 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 137
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 138 CTVSEIFHFCWMLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 197
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 198 KGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 257
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 258 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 303
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 304 EIGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 351
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 352 IKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE 411
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 412 -------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 463
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L
Sbjct: 464 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLC 522
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 523 REVVKHLNQIEEQILDHLAWKPESPLWEKI 552
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 777 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 836
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 837 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 896
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 897 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 956
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 957 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1008
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1009 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1048
>gi|355715606|gb|AES05381.1| retinoblastoma-like 2 [Mustela putorius furo]
Length = 1058
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 255/570 (44%), Gaps = 73/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 6 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW------- 55
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 56 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 114
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 115 CTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 174
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 175 KGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 234
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED--- 357
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 235 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 280
Query: 358 -----DSLLGSGSLSGGAVNITGA---KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
L SGS + A + ++ FD S I++PL+ G+
Sbjct: 281 EIGTLSRCLNSGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 328
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 329 VKDNSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMYE 388
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
I+ + + S + I ++ R + LYY+VLE++ E + L +L+
Sbjct: 389 -IYSQHCQPDEDFSSSKE-------IASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 439
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L
Sbjct: 440 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLC 498
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 499 REVVKHLNQIEEQILDHLAWKPESPLWDRI 528
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 52/295 (17%)
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
P+ G + +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q
Sbjct: 741 PSTGSSIRPRKTSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPE 800
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L +RH+DQ+++C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 801 LMMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNS 860
Query: 849 ------------------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNR 887
R+ +D ++ + + VP + P L A + M+
Sbjct: 861 GSSDSRSHQNSPTELNKDRTSRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGANSDMEEEE 920
Query: 888 VSEV--NHNN--------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSP 929
++ +NN +P +S +P + SP+++ S H VY+SP
Sbjct: 921 RGDLIQFYNNIYIKQIKTFAMKYSQANVMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP 980
Query: 930 LRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K + ++S K +Y + SPSK L +IN + + + RG L
Sbjct: 981 ---HKNETVLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1025
>gi|119603207|gb|EAW82801.1| retinoblastoma-like 2 (p130), isoform CRA_a [Homo sapiens]
Length = 1067
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 252/570 (44%), Gaps = 72/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L IL+ + ++++FF ++ ++
Sbjct: 14 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW------- 63
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 64 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 122
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 123 CTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 182
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 183 KGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 242
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 243 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 288
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 289 EIGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 336
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 337 IKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE 396
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 397 -------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 448
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L
Sbjct: 449 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLC 507
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 508 REVVKHLNQIEEQILDHLAWKPESPLWEKI 537
Score = 90.9 bits (224), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 762 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 821
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 822 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 881
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 882 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 941
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 942 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 993
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 994 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1033
>gi|194224386|ref|XP_001499565.2| PREDICTED: retinoblastoma-like protein 1 [Equus caballus]
Length = 1068
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 157/663 (23%), Positives = 283/663 (42%), Gaps = 118/663 (17%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF-WFAFVLYLVRR 86
L LC+ L++DE + E L + +AI E E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEA-----------LDDFAAIRGKYSLEGEVIHWLACSLYVACR 68
Query: 87 LS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 69 KSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFNKMKKWMD-----MSNM-PQEFR 119
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYH 198
R+E L+ NF +++ K ++ I+ + F P KQ + + D
Sbjct: 120 ERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKDLF 174
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHD 248
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 175 NFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDF 234
Query: 249 SSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENL 307
+ + S + +I+ LC ++D + + I E I+ + +K
Sbjct: 235 HTADFRASEEPPCIISVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------ 282
Query: 308 ENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLS 367
++ + L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 -------ILKGDCLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD---------- 325
Query: 368 GGAVNITGAKRKFDSLASPVKTITSP------LSPH--RSSASHPNGIAGGA----TSKM 415
A G RKF A P+ +T+ L H + ++ P+ G +
Sbjct: 326 --AEEEIGTPRKFTGDA-PLGKLTAQANVECNLQQHFEKKTSFAPSTPLTGRRYLREKEA 382
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
V+TPV++A + L+ ++ L + PS +L +SC ++ ++M+
Sbjct: 383 VITPVASATQSVSRLQGIVAGLKNAPSEQLINIFESCMRNPMENIMKIV----------K 432
Query: 476 GLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL 532
G+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 433 GIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLL 492
Query: 533 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
+ FHR ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 493 EQDIFHRSLMACCLEIVLFAYSS-PRTFPWIVEVLNLQPFYFYKVIEVVIRSEEGLSRDM 551
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINF 652
+HLN +EE++LES+ W S+++ +L + A+ +P+ + + NF
Sbjct: 552 VKHLNGVEEQILESLAWSHNSALWEALQAS--------------ANKVPTCEEVIFPNNF 597
Query: 653 SSG 655
+G
Sbjct: 598 ETG 600
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 65/291 (22%)
Query: 725 SPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRESV 775
SP + +P E TG+N +F+ K+ LA+VR+ + +L +S ++ +
Sbjct: 762 SPKQTHPSKAQEV-HPTGVNKPKRTGSLALFYRKVYHLASVRLRDLCVKLDVSNELLRKI 820
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFR 835
+ F+ L L +RH+DQ++LC FY +A++++ TF+EII +YR QPQ V+R
Sbjct: 821 WTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAQVTKEERTFQEIIKSYRNQPQANSHVYR 880
Query: 836 SVFV-----------------------DWASARQS-----GRSEQDHVDIITFYNKIFVP 867
SV + D A ++ G +++ D+I FYN I++
Sbjct: 881 SVLLKSIPTEVVAYNKNVNGDFEMRDCDLEDATKTPDCSIGPVKEERADLIKFYNTIYLG 940
Query: 868 AVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNV 925
V+ A+K + +S +H + P P SP FP + SP+++S H++
Sbjct: 941 RVEAF---------ALKYD-LSNQDHVMEAP-PLSP----FPHIKQQPGSPRRISQQHSI 985
Query: 926 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
YVSP K ++ S Y G SPSK L DIN+ + +
Sbjct: 986 YVSP---HKNGPGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|403292586|ref|XP_003937318.1| PREDICTED: retinoblastoma-like protein 2 [Saimiri boliviensis
boliviensis]
Length = 1082
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 252/570 (44%), Gaps = 72/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L IL+ + ++++FF ++ ++
Sbjct: 29 WLACALYVACR---KSVPTVNKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW------- 78
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 79 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 137
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 138 CTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 197
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 198 KGLSEDFQAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 257
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 258 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 303
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 304 EIGTLSRCLNTGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 351
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D + + R + E
Sbjct: 352 VKENSPCVTPVSTATHSLSRLHTMLAGLKNAPSEKLEQILRTCSRDPSQAIANRLKEMFE 411
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 412 -------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 463
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L
Sbjct: 464 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLC 522
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 523 REVVKHLNQIEEQILDHLAWKPESPLWEKI 552
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 777 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 836
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 837 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 896
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 897 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 956
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP++V S H VY+SP K +A
Sbjct: 957 IKQIKTFAMKYSQANMDVP-PLSP----YPFIRTGSPRRVQLSQNHPVYISP---HKNEA 1008
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1009 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1048
>gi|326680423|ref|XP_002667000.2| PREDICTED: retinoblastoma-like protein 2 [Danio rerio]
Length = 1087
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 160/634 (25%), Positives = 277/634 (43%), Gaps = 98/634 (15%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T+ +LC++ L++DE + + + NIS N E +E W A LY+
Sbjct: 11 TKHAFEELCRD-LNMDEESSNRAWRSYE--------NISK--NYTLEGSELHWLACSLYV 59
Query: 84 VRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R S + +G+ + N +L ILR + ++++FF ++ K ++N+ D
Sbjct: 60 ACRSSVPT---MSKGTAEGNYVSLTRILRSSQQSLIEFFSKM-----KKWQDMANL-PRD 110
Query: 143 WENRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSAAASTSGYISD 196
++ E +L+ NF S++ K Y ++R+ F LP G KQ T +++
Sbjct: 111 FQQSTE--KLERNFTVTSVIFKKYLPLFRDIFKTPTDELPRTHRGRKQRRHPCT---VTE 165
Query: 197 YHRFGWLLFLALRIHAFSRF----KDLVTCTNGLVSILAILIIHVPV----------RFR 242
F W+LF IHA F DLV + L+ L ++ + + F+
Sbjct: 166 VFNFCWILF----IHAKGNFPMISDDLVNSYHLLLCALDLVYCNALLCSSRKDLLNPAFK 221
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+S+ K + I LC ++D + + E I + ++K + E
Sbjct: 222 GLPEDFNSKDYKPGPGSLCFIEQLCELHDGLVLEAKGAKEHFWKPFIKKLFERKILKGKE 281
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
D L F ++ + SL L + Y+ + G LDER+F+ +
Sbjct: 282 -----------DTLTGF---LEPVNFGDSLASLNRVYEEHVLSSGSLDERIFLGDGARED 327
Query: 361 LGSGSLSGGAVNITGAKRKFD----------SLASPVKTITSPLSPHRSSASHPNGIAGG 410
+G+ G N A S AS ++ +++PL+ R P I G
Sbjct: 328 IGTPGPYEGIENQDRANNPLQNSMTALDVSVSQASALR-VSTPLTGRRYV---PESIVG- 382
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
TPVS+AM + L T++ +PS +L +SC +D T V R + E
Sbjct: 383 -------TPVSSAMQSVGRLHTLLTGFKYRPSVKLRDIFRSCVRDPTESVAARLKEMSEI 435
Query: 471 IFPS-SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ G G+ +L +I + L A LYY+ LE + E + L +L+
Sbjct: 436 FLQNYEGTGD-------DNKSLARDIAVKYFCL-AEALYYKSLEVIINQEKKRLGDVDLS 487
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR ++AC E+V+ +++ FP VL+ + A+ KVIE +R EE L
Sbjct: 488 GVLEQDVFHRSLIACCLEIVIFSYRPPGE-FPRVLQIFDLPAYHFYKVIEVLVRAEEGLF 546
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
RE+ +HLN +EE++LES+ W+ S ++ + A+
Sbjct: 547 REVVKHLNHVEEQVLESLAWKGNSPLWERIREAK 580
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 53/283 (18%)
Query: 729 PNPGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRT 787
P G + +TG + +FF K+ LA+VR+ + +L +S +R ++ F+ L T
Sbjct: 764 PQQGTPTKRAQKTGSLCLFFRKVYHLASVRLRDLCAKLDISADLRRKIWTCFEYSLVHCT 823
Query: 788 SLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS 847
L +RH+DQ+++C Y + K+++ + +F+ I+ YR QPQ V+RSV + R S
Sbjct: 824 DLMMDRHLDQLLMCAIYVMTKVTKEDKSFQNIMKCYRSQPQASSSVYRSVLISGRKRRHS 883
Query: 848 GRSEQDH--------------------VDIITFYNKIFVPAVKPLLVELGPAG------- 880
G +E H + I P+ P P G
Sbjct: 884 GNTENTHRQSSPTEGAQEQASGESSPVSMRSSSTLPIPQPSSAPSTPTRAPGGPQEQEEE 943
Query: 881 ----------TAMKTNRVSEVNHNNDGPCPG---SPKVSVFPALPDMSPKKVSATHN--V 925
+K + + ++++ P G +P + +P+L SP++V +HN +
Sbjct: 944 RGDLIRFYNHVYIKQIKPFALRYSSNSPKNGQAETPPLCPYPSLRIGSPRRVLLSHNHSI 1003
Query: 926 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
Y+SP +T + IS K +Y + SPS L +IN
Sbjct: 1004 YISPHKTG---SPISPRDKIFY-------YVSSSPSHRLREIN 1036
>gi|1045520|gb|AAB48991.1| retinoblastoma-related protein pRb2/p130 [Mus musculus]
Length = 1125
Score = 137 bits (344), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 149/619 (24%), Positives = 266/619 (42%), Gaps = 89/619 (14%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 201 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHP 260
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 261 KDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG 317
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGS--L 366
++ + S + K Y+ G LDERVF+ ED + +G+ S L
Sbjct: 318 -----------FLEPGNFGESFKAVNKAYEEYVLPAGNLDERVFLGEDAEEEVGTLSRCL 366
Query: 367 SGGAVNITGAKRKFDSL------ASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPV 420
S + + + + + S + +PL+ G+ + VTPV
Sbjct: 367 SAASGTESAERTQMRDILQQHLDKSKALRVCTPLT----------GVRYVQENSPCVTPV 416
Query: 421 STAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGER 480
STA + L T++ L + PS +LER L+SC +D T + R + E
Sbjct: 417 STAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYE----------- 465
Query: 481 CVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
+ Q N E LYY+VLE++ E + L +L+ +L ++ FHR
Sbjct: 466 IYSQHFQPDENFSNCAKEM-------LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRS 518
Query: 541 MLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
+LAC E+V +HK FP + E + + KVIE FIR E+ L RE+ +HLN +E
Sbjct: 519 LLACCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIE 577
Query: 601 ERLLESMVWEKGSSMYNSL 619
E++L+ + W+ S +++ +
Sbjct: 578 EQILDHLAWKTKSPLWDRI 596
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 64/292 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 820 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 879
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE--------- 851
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE
Sbjct: 880 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSPT 938
Query: 852 --------QDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTN-------------- 886
+D ++ + + VP + P L A + ++
Sbjct: 939 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYR 998
Query: 887 --------RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMD 936
+ S+ N D +P +S +P + SP++V S +H +Y+SP +
Sbjct: 999 KQIQAFAMKYSQANAQTD-----TPPLSPYPFVRTGSPRRVQLSQSHPIYISP---HNNE 1050
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
A+ S K +Y + SPSK L +IN + + + RG L DD
Sbjct: 1051 AMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL-LDD 1094
>gi|397502866|ref|XP_003822060.1| PREDICTED: retinoblastoma-like protein 2 [Pan paniscus]
Length = 1139
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 270/621 (43%), Gaps = 83/621 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ + +
Sbjct: 204 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHA 263
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 264 KDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG 320
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL--------- 360
++ + S + K Y+ + G LDER+F+ ED
Sbjct: 321 -----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCL 369
Query: 361 -LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVT 418
GSG+ + V + ++ FD S I++PL+ R + VT
Sbjct: 370 NAGSGTETAERVQMKNILQQHFDK--SKALRISTPLTAVRYIKEN----------SPCVT 417
Query: 419 PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG 478
PVSTA + L T++ L + PS +LE+ L++C +D T + R + E +
Sbjct: 418 PVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IY 470
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N I ++ R + LYY+VLE++ E + L +L+ +L + FH
Sbjct: 471 SQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFH 529
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
R +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+ +HLN
Sbjct: 530 RSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQ 588
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++L+ + W+ S ++ +
Sbjct: 589 IEEQILDHLAWKPESPLWEKI 609
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 89/301 (29%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 834 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 893
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS-----GRS----- 850
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++ GRS
Sbjct: 894 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDGRSHQNSP 953
Query: 851 ---------------------------------------------EQDHVDIITFYNKIF 865
E++ D+I FYN I+
Sbjct: 954 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 1013
Query: 866 VPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATH 923
+ +K AMK ++ N D P P SP +P + SP+++ S H
Sbjct: 1014 IKQIKTF---------AMKYSQA-----NMDAP-PLSP----YPFVRTGSPRRIQLSQNH 1054
Query: 924 NVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGT 980
VY+SP K + ++S K +Y + SPSK L +IN + + + RG
Sbjct: 1055 PVYISP---HKNETMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGI 1104
Query: 981 L 981
L
Sbjct: 1105 L 1105
>gi|291388626|ref|XP_002710823.1| PREDICTED: retinoblastoma-like protein 1 [Oryctolagus cuniculus]
Length = 1068
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 153/631 (24%), Positives = 268/631 (42%), Gaps = 105/631 (16%)
Query: 65 GNGMPEEAERFWFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFK 122
GN E W A LY+ R S G+ + +G N +L ILR KL+++ FF
Sbjct: 47 GNYSLEGEIMHWLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFS 103
Query: 123 ELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF------LP 176
++ +++ +SN+ ++ R+E L+ NF +++ K ++ I+ + F LP
Sbjct: 104 KMKKWMD-----MSNL-SQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEELP 155
Query: 177 SDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI-- 234
KQ + + D F W LF+ + + DLV + L+ L ++
Sbjct: 156 KLPRSRKQRRIPCS---VKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFAN 212
Query: 235 -IHVPVR-------FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-N 285
I P R F+ + + + +IA LC ++D + + I E
Sbjct: 213 AIMCPNRRDLLNPSFKGLPSAFHTADFQAPEEPPCIIAVLCELHDGLLVEAKGIKEHYFK 272
Query: 286 TLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNK 345
I+ + +K ++ E L+D SS + + + K+Y+
Sbjct: 273 PYISKLFDRK-------------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTV 313
Query: 346 GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP------LSPH-- 397
G+ DER+F+ D A G RKF +P+ +T+ L H
Sbjct: 314 GDFDERIFLGAD------------AEEEIGTPRKFTG-DTPLGKLTAQANVECNLQQHFE 360
Query: 398 --RSSA-SHP-NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCD 453
RS A S P G + V+TPV++A + L++++ L + S +L +SC
Sbjct: 361 KKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAASEQLTNIFESCI 420
Query: 454 KDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYR 510
++ ++ + G+GE Q + +A R A LYY+
Sbjct: 421 RNPVENITKIV----------KGIGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYK 470
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGIT 570
+LE + E + LH +++ LL + FHR ++AC E+VL + + FP ++E +
Sbjct: 471 ILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQ 529
Query: 571 AFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEI 630
F KVIE IR EE L R++ +HLNS+EE++LES+ W S ++ +L +
Sbjct: 530 PFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHSSVLWEALQAS-------- 581
Query: 631 NRLGLLADPMPSLDAIATHINFSSGGLSPVH 661
A+ +P+ + + NF +G V
Sbjct: 582 ------ANKVPTCEEVIFPNNFETGNCGNVQ 606
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 56/277 (20%)
Query: 731 PGGGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSL 789
P G TG + +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L
Sbjct: 775 PLAGMSKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDL 834
Query: 790 FFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV---------- 839
+RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV +
Sbjct: 835 MRDRHLDQLLLCAFYVMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREVVTY 894
Query: 840 -------------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
D A + SG +++ D+I FYN ++V VK
Sbjct: 895 HKNINGDFEMADGDLEDATKTPDCSSGPVKEERGDLIKFYNTVYVGRVKSF--------- 945
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALI 939
A+K + +S +H D P P SP FP + SP++VS H++YVSP K + +
Sbjct: 946 ALKYD-LSNKDHMMDVP-PLSP----FPHIKQQPGSPRRVSQQHSIYVSP---HKNGSGL 996
Query: 940 SHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+ S Y G SPSK L DIN+ + +
Sbjct: 997 TPRSALLYRFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|426241455|ref|XP_004014606.1| PREDICTED: retinoblastoma-like protein 1 [Ovis aries]
Length = 1066
Score = 136 bits (342), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 144/614 (23%), Positives = 265/614 (43%), Gaps = 105/614 (17%)
Query: 76 WFAFVLYLVRRLS--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGP 133
W A LY+ R S G+ + +G N +L ILR KL+++ FF ++ +++
Sbjct: 56 WLACSLYVACRKSIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD---- 108
Query: 134 ILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAA 187
+SN+ ++ R+E L+ NF +++ K ++ I+ + F P KQ
Sbjct: 109 -MSNL-PQEFRERIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRI 164
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR---- 240
+ + + F W LF+ + + DLV + L+ L ++ I P R
Sbjct: 165 PCS---VKELFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQELL 221
Query: 241 ---FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKP 296
F+ + + + S + +I LC ++D + + I E I+ + +K
Sbjct: 222 NPSFKGLPSNFQTADFRASEEPPCIIPVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK- 280
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINE 356
++ E L+D SS + + + K+Y+ G+ DER+F+
Sbjct: 281 ------------------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGA 322
Query: 357 DDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP------LSPH--RSSASHPNGIA 408
D A G RKF P+ +T+ L H + ++ P+
Sbjct: 323 D------------AEEEIGTPRKFTG-DGPLGKLTAQANVECNLQHHFEKKTSFAPSTPL 369
Query: 409 GGA----TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA 464
G + V+TPV++A + L++++ L + PS +L +SC ++ ++M+
Sbjct: 370 TGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIV 429
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQ 521
G+GE Q + +A R A LYY++LE + E +
Sbjct: 430 ----------KGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETR 479
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESF 581
LH +++ LL + FH ++AC E+VL + + FP ++E + F KVIE
Sbjct: 480 RLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVV 538
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMP 641
IR EE L R++ +HLNS+EE++LES+ W S+++ +L + A+ +P
Sbjct: 539 IRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQAS--------------ANRVP 584
Query: 642 SLDAIATHINFSSG 655
+ + + NF +G
Sbjct: 585 TCEEVIFPNNFETG 598
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 55/289 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 761 PKQTHLTKAQEVHPVGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 820
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 821 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 880
Query: 838 FV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAV 869
+ D A + SG +++ D+I FYN I+V V
Sbjct: 881 LLKSIPREVVAYNKNLNGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRV 940
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H + P P SP FP + SP+++S H++YV
Sbjct: 941 KSF---------ALKYD-LSNQDHVMEAP-PLSP----FPHIKQQPGSPRRISQQHSIYV 985
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 986 SP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1024
>gi|354471659|ref|XP_003498058.1| PREDICTED: retinoblastoma-like protein 2 [Cricetulus griseus]
gi|344235903|gb|EGV92006.1| Retinoblastoma-like protein 2 [Cricetulus griseus]
Length = 1136
Score = 136 bits (342), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 165/695 (23%), Positives = 291/695 (41%), Gaps = 87/695 (12%)
Query: 10 ASNNSESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMP 69
A++ ++ E R +LC L++DE E +R + + + GN +
Sbjct: 29 ATDGAQPAESPGPQIEQRFEELCSR-LNMDEAARAEAWGSYRS----MSESYTLEGNDL- 82
Query: 70 EEAERFWFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFL 128
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 83 -----HWLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW- 133
Query: 129 VKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAA 187
++ + R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 134 -------EDMANLPPQFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGR 186
Query: 188 ASTSG--YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH--------- 236
S+ F W+LF+ + + DLV + L+ L ++ +
Sbjct: 187 KQRRQPCTTSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKE 246
Query: 237 -VPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKK 294
V F+ + + K S+ +I LCS++D + + I E I + +K
Sbjct: 247 LVNPNFKGLSEDCHPKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEK 306
Query: 295 KPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFI 354
K + E ENL ++ + S + K Y+ G LDER+F+
Sbjct: 307 KLLKGKE---ENLTG-----------FLEPGNFGESFKAVNKAYEEYVLAAGNLDERIFL 352
Query: 355 NED-DSLLGSGSLSGGAVNITGAKRKF---DSLA-----SPVKTITSPLSPHRSSASHPN 405
ED + +G+ S A + T + + D L S I +PL+
Sbjct: 353 GEDAEEEVGTLSRCLNAASSTESAERTQVKDILQQHLDKSKALRICTPLT---------- 402
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAH 465
G++ + VTPVSTA + L T++ L + PS LE+ L++C +D T + R
Sbjct: 403 GVSYVQETSSCVTPVSTAAYSLSRLHTMLSGLRNAPSERLEQILRTCSRDPTQAIANRLK 462
Query: 466 IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHA 525
+ E E S + AN A LYY+VLE++ E + L
Sbjct: 463 EMYEIYSQHFQPDEDFSNCSKEIANKYFRF--------AEMLYYKVLESIIEQEQKRLGD 514
Query: 526 KNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHE 585
+L+ +L + FHR +LAC E+V ++K FP + E + + KVIE FIR E
Sbjct: 515 MDLSGVLEQDAFHRSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAE 573
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDA 645
+ L RE+ +HLN +EE++L+ + W+ S +++ + NR+ + MP +
Sbjct: 574 DGLCREVVKHLNQIEEQILDHLAWKTESPLWDRIRDNE-------NRVPTCEEVMPPQNL 626
Query: 646 IAT-HINFSSGGLSPVHSLHKHETSPGQNGDIRSP 679
T I + L+P + G G I SP
Sbjct: 627 ERTDEICIAGSPLTPRRVSEVRSDAGGLGGGITSP 661
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 71/296 (23%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++F K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFIRKVYHLAGVRLRDLCTKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGNSDSRSHQNSP 949
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGT------------------ 881
R+ +D ++ + + VP + P L A +
Sbjct: 950 TELNKDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGANSDIEEEERGDLIQFYNNIY 1009
Query: 882 -------AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRT 932
AMK ++ ++++ +P +S +P + SP++V S H +Y+SP
Sbjct: 1010 IKQIQTFAMKYSQANQMD---------TPPLSPYPFVRTGSPRRVQLSQNHPIYISP--- 1057
Query: 933 SKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
K +A +S K +Y + SPSK L +IN + + + RG L DD
Sbjct: 1058 HKNEATLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL-LDD 1105
>gi|18088202|gb|AAH20528.1| Retinoblastoma-like 2 [Mus musculus]
Length = 1135
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 148/620 (23%), Positives = 270/620 (43%), Gaps = 81/620 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 201 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHP 260
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 261 KDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG 317
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLG------ 362
++ + S + K Y+ G LDERVF+ ED + +G
Sbjct: 318 -----------FLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCL 366
Query: 363 ---SGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
SG+ S +T ++ + ++ T PL+ G+ + VTP
Sbjct: 367 SAASGTESAERTQMTDILQQHLDKSKALRVCT-PLT----------GVRYVQENSPCVTP 415
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTA + L +++ L + PS +LE+ L+SC +D T + R + E +
Sbjct: 416 VSTAAHSLSRLHSMLTGLRNAPSEKLEQILRSCSRDPTQAIADRLKEMYE-------IYS 468
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
+ +N I + R + LYY+VLE++ E + L +L+ +L ++ FHR
Sbjct: 469 QHFQPDENFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHR 527
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
+LAC E+V +HK FP + E + + KVIE FIR E+ L RE+ +HLN +
Sbjct: 528 SLLACCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQI 586
Query: 600 EERLLESMVWEKGSSMYNSL 619
EE++L+ + W+ S +++ +
Sbjct: 587 EEQILDHLAWKTKSPLWDRI 606
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 64/292 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 830 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE--------- 851
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE
Sbjct: 890 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSPT 948
Query: 852 --------QDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTN-------------- 886
+D ++ + + VP + P L A + ++
Sbjct: 949 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYR 1008
Query: 887 --------RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMD 936
+ S+ N D +P +S +P + SP++V S +H +Y+SP +
Sbjct: 1009 KQIQAFAMKYSQANSQTD-----TPPLSPYPFVRTGSPRRVQLSQSHPIYISP---HNNE 1060
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
A+ S K +Y + SPSK L +IN + + + RG L DD
Sbjct: 1061 AMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL-LDD 1104
>gi|1255232|gb|AAC52598.1| retinoblastoma-related protein p130 [Mus musculus]
gi|1589572|prf||2211351A retinoblastoma protein p130
Length = 1135
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 148/620 (23%), Positives = 270/620 (43%), Gaps = 81/620 (13%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRNFNIHDSS 250
W+LF+ + + DLV + L+ L ++ + V F+ +
Sbjct: 201 CWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHP 260
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLEN 309
+ K S+ +I LCS++D + + I E I + +KK + E ENL
Sbjct: 261 KDSKASSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG 317
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLG------ 362
++ + S + K Y+ G LDERVF+ ED + +G
Sbjct: 318 -----------FLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCL 366
Query: 363 ---SGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
SG+ S +T ++ + ++ T PL+ G+ + VTP
Sbjct: 367 SAASGTESAERTQMTDILQQHLDKSKALRVCT-PLT----------GVRYVQENSPCVTP 415
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGE 479
VSTA + L +++ L + PS +LE+ L+SC +D T + R + E +
Sbjct: 416 VSTAAHSLSRLHSMLTGLRNAPSEKLEQILRSCSRDPTQAIADRLKEMYE-------IYS 468
Query: 480 RCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHR 539
+ +N I + R + LYY+VLE++ E + L +L+ +L ++ FHR
Sbjct: 469 QHFQPDENFSNCAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHR 527
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSL 599
+LAC E+V +HK FP + E + + KVIE FIR E+ L RE+ +HLN +
Sbjct: 528 SLLACCLEVVAFSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQI 586
Query: 600 EERLLESMVWEKGSSMYNSL 619
EE++L+ + W+ S +++ +
Sbjct: 587 EEQILDHLAWKTKSPLWDRI 606
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 64/292 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 830 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE--------- 851
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE
Sbjct: 890 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSPT 948
Query: 852 --------QDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTN-------------- 886
+D ++ + + VP + P L A + ++
Sbjct: 949 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYR 1008
Query: 887 --------RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMD 936
+ S+ N D +P +S +P + SP+++ S +H +Y+SP +
Sbjct: 1009 KQIQAFAMKYSQANSQTD-----TPPLSPYPFVRTGSPRRIQLSQSHPIYISP---HNNE 1060
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
A+ S K +Y + SPSK L +IN + + + RG L DD
Sbjct: 1061 AMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL-LDD 1104
>gi|410907800|ref|XP_003967379.1| PREDICTED: retinoblastoma-like protein 2-like [Takifugu rubripes]
Length = 1084
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 156/629 (24%), Positives = 258/629 (41%), Gaps = 98/629 (15%)
Query: 26 ARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVR 85
A DLC+ L++DE E K + N E +E W A LY+
Sbjct: 13 AGFEDLCR-ALNMDEEAANEAWKTYESISR----------NFTLEGSELHWLACSLYVAC 61
Query: 86 RLSEKN-GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
R S G+ +G N +L ILR ++++++FF ++ ++ ++ E
Sbjct: 62 RSSVPTVGKGTSEG---NYVSLTRILRCSEMSLIEFFNKMKKW--------QDMANLPQE 110
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDA-----NGDKQSAAASTSGYISDYH 198
R +L+ NF +++ K Y I++ F PS+ KQ T IS+
Sbjct: 111 FRQSTNKLERNFTVSAVIFKKYVPIFKSIFKAPSEEPPRVHRSRKQRRHPCT---ISEVF 167
Query: 199 RFGWLLFLALRIHAFSRF----KDLVTC------------TNGLVSILAILIIHVPVRFR 242
F W+LF +HA F DLV TN L+ +++ F+
Sbjct: 168 NFCWVLF----VHAKGNFPMISDDLVNSYHLLLCALDLVLTNALLCNARKELLNP--NFK 221
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
SS+ + + LC ++D + + + E I + K+ E
Sbjct: 222 GLPEDFSSKDYRPCAGPYCFMEQLCKLHDGLVLEAKGVKEHFWKPFIKKLFHKRILRGKE 281
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
D L F +D + S L + Y+ G LDER+F E S
Sbjct: 282 -----------DSLTGF---LDPMNFGDSFLSLSRVYEEHILATGSLDERIFTGEGASEE 327
Query: 361 LGSGS--LSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
+G+ L G N A R SL + + +PL+ + +V
Sbjct: 328 IGTPGPCLYEGLENQNSAISRLHVSLTASALKVATPLTGRKY-----------IQENVVA 376
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI---FPS 474
+P+STAM + L T++ PSA+L ++C +D + + RR + E F
Sbjct: 377 SPISTAMNSVGRLHTLLSGTQQGPSAKLAETFRACARDPSDVITRRLQGMFELFSQHFEG 436
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN 534
SG R M A + A LYYR LE++ E +L +L+ +L
Sbjct: 437 SGAENRG----------MGKEMAVKYFHLAEALYYRTLESIIEREKMILGNADLSCILEQ 486
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
+ FHR +L C E+V+ +++ FP ++ + A+ KVIE +R E+ L RE+ +
Sbjct: 487 DVFHRSLLVCCLEIVIFSYRPPGD-FPNLISIFQLPAYHFYKVIEVLVRSEQGLFREVVK 545
Query: 595 HLNSLEERLLESMVWEKGSSMYNSLTVAR 623
HLN +EE++LES+ W S ++ +L A+
Sbjct: 546 HLNQVEEQVLESLAWTSNSPLWETLRGAK 574
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 57/275 (20%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+++FF K+ +A+VR+ + +L +S ++R ++ F+ L T+L +RH+DQ+++C
Sbjct: 769 LSLFFRKLYHMASVRLRDLCAKLDISAELRRKIWTCFEYSLVHCTNLMMDRHLDQLLMCA 828
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRS-----------E 851
Y ++K+++ + +F+ I+ YR QPQ V+R V + QSG +
Sbjct: 829 VYIMSKVTKEDRSFQNIMKCYRTQPQAGSNVYRCVLISGRRKHQSGSNGTKKTDSTADIS 888
Query: 852 QDHVD----IITFYNKIFVPAVKPLLVELGPAGTAMKT-------NRVSEVNHNND---- 896
QD D + + +P +P P ++KT V E D
Sbjct: 889 QDSADGDNSPVPVRSSSTLPTSQPGSAPSTPTSNSIKTLPSSLPGGEVEEKEEQGDLIHF 948
Query: 897 ---------------------GPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTS 933
SP + +P L SP+++ S+ H++++SP +T
Sbjct: 949 YNQVYVKQMRSFALRYSVSSLATAVDSPPLCPYPTLRTGSPRRMLLSSKHSIFISPHKTG 1008
Query: 934 KMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+ YY C SP L +IN
Sbjct: 1009 STPSASPRDKIYYYIC--------SSPPNRLQEIN 1035
>gi|260834765|ref|XP_002612380.1| hypothetical protein BRAFLDRAFT_218889 [Branchiostoma floridae]
gi|229297757|gb|EEN68389.1| hypothetical protein BRAFLDRAFT_218889 [Branchiostoma floridae]
Length = 1053
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 157/640 (24%), Positives = 278/640 (43%), Gaps = 106/640 (16%)
Query: 18 AGDNDAT---EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAER 74
AG ++ T E R DLC + L++D+ +E + F + + N + G+ +
Sbjct: 2 AGPDEETPSPEQRYQDLCMD-LNMDKIATEEAWQSFEK----MSTNYTLEGDDL------ 50
Query: 75 FWFAFVLYLVRR--LSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
W A LY+ R L+ G +G N +L +LR KL+++ FF ++ ++
Sbjct: 51 HWLACALYVACRKSLTPTVGRGTVEG---NCVSLTRLLRSAKLSLIQFFNKMKKW----- 102
Query: 133 PILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSA 186
+++ + R + L+ NF +++ K ++ I+ + F P G KQ
Sbjct: 103 ---ADMASLPQDFRDKVDRLERNFAVSTVIFKKFEPIFLDLFRNPGDDQPRAPRGRKQRR 159
Query: 187 AASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTN----------------GLVSIL 230
TS SD F W LF+ ++ + + DLV + G +L
Sbjct: 160 LPCTS---SDVFSFCWTLFVQVKGNFPAISDDLVNSYHLLLCCLDLFFGNALCAGRKDLL 216
Query: 231 AILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIA 289
+P F N R + ++ +I LC ++D + + I E I
Sbjct: 217 NTEFPALPEGFTN-------RDWRSPSEPPCIIDKLCELHDGLVLEAKGIKEHWWKPYIK 269
Query: 290 DILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELD 349
+ KK L+D ++ + + K+Y+ G+ D
Sbjct: 270 KLFDKK---------------------TLTGLLDLATFEINNKSINKEYEEWVLTVGDFD 308
Query: 350 ERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVK---TITSPLSPHRSSASHP-N 405
ER+F+ ED + G+ + A NITG + +S +K T L+P S P
Sbjct: 309 ERIFLGEDADV-EIGTPAKPAPNITGELGERMVQSSHLKQHMAETKSLAP-----STPLT 362
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAH 465
G VTPVSTA + L+ ++ L + PS L + C ++ + R
Sbjct: 363 GRRYLKEKDPTVTPVSTATQSVSRLQALLAGLKTSPSDNLTKLFSECSRNPQESISSR-- 420
Query: 466 IILEAIFPSSGLGERCVTGSLQGA--NLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQV 522
I E +GE+ T Q + + +I Q+RL A LYY+VLE + E +
Sbjct: 421 -IKE-------MGEQFCTSYTQPSEDHPGSHIEFAQKRLRLAETLYYKVLENVMLQEKKR 472
Query: 523 LHAK-NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESF 581
L K +L SL+ + FHR ++AC E+++ ++ + FP +++ G++ + KVIE
Sbjct: 473 LKGKLDLVSLMEQDVFHRSLMACCLEIIIFSYNS-QRTFPWIIDVFGLSPYHFYKVIEVL 531
Query: 582 IRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
IR E+ L R++ +HLN +EE++LES+ W+ S ++ ++ +
Sbjct: 532 IRAEDGLSRDVVKHLNFIEEQILESLAWKSESPLWEAMKM 571
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 56/276 (20%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +FF K+ LA+VR+ + E+L++ ++R ++ F L + L +RH+DQI++C
Sbjct: 763 LGLFFRKVYHLASVRLRDLCEKLEVGDELRRKMWTCFTHTLKEHVELMRDRHLDQIVMCS 822
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ---------- 852
Y +AK++Q + +F++I+ YR QPQ V + + + + S ++
Sbjct: 823 IYVMAKVTQHDKSFQDIMKCYRTQPQASSHVSLTFLNRYLNHKHSIDNQHFSRMYLQQEL 882
Query: 853 ----------------------DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
+ D+I FYN IFV +K + + P G ++
Sbjct: 883 CISSAPPTPTRLAGLGATVDGDERGDLIQFYNTIFVTKLKSYVRKFSPTG-----DQKVG 937
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACV 950
+ N P P P SP++VS H +Y+SP + + L S+ Y C
Sbjct: 938 LEQKNLSPIP-------LPRTHMQSPRRVSVRHPIYISPHKNGR--PLTPTSAMLY--CF 986
Query: 951 GESTHAYQSPSKDLTDINHRLNSNRR--VRGTLNFD 984
G +SP+K+L DI + S + + LN+D
Sbjct: 987 G------KSPAKNLQDITSMIKSGEQPTKKRALNYD 1016
>gi|300797402|ref|NP_001179531.1| retinoblastoma-like protein 1 [Bos taurus]
gi|440905887|gb|ELR56207.1| Retinoblastoma-like protein 1 [Bos grunniens mutus]
Length = 1068
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 149/629 (23%), Positives = 270/629 (42%), Gaps = 102/629 (16%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVIHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K ++ I+ + F P KQ + + +
Sbjct: 121 RIE--RLERNFEVSTVIFKKFEPIFLDIFQNPYEEPPKLPRSRKQRRIPCS---VKELFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+ +
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQELLNPSFKGLPSNFQ 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +I LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIPVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D S + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLCSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSP------LSPH--RSSASHPNGIAGGA----TSKMV 416
A G RKF P+ +T+ L H + ++ P+ G + V
Sbjct: 326 -AEEEIGTPRKFTG-DGPLGKLTAQANVECNLQHHFEKKTSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCMRNPMENIMKIV----------KG 433
Query: 477 LGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 434 IGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLE 493
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 494 QDIFHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMV 552
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+HLNS+EE++LES+ W S+++ +L +
Sbjct: 553 KHLNSIEEQILESLAWSHDSALWEALQAS 581
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 55/289 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 763 PKQTHLTKAQEVHPIGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 822
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 823 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 882
Query: 838 FV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFVPAV 869
+ D A + SG +++ D+I FYN I+V V
Sbjct: 883 LLKSIPREVVAYSKNLNGDFEMTDCDLEDATKTPDCSSGPVKEERGDLIKFYNTIYVGRV 942
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H + P P SP FP + SP+++S H++YV
Sbjct: 943 KSF---------ALKYD-LSNQDHVMEAP-PLSP----FPHIKQQPGSPRRISQQHSIYV 987
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 988 SP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 1026
>gi|332227839|ref|XP_003263100.1| PREDICTED: retinoblastoma-like protein 2 [Nomascus leucogenys]
Length = 1082
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 252/570 (44%), Gaps = 72/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + N +L IL+ + ++++FF ++ ++
Sbjct: 29 WLACALYVACR---KSVPTVSKGTAEGNYVSLTRILKCSEQSLIEFFNKMKKW------- 78
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 79 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKHPQEEQPRQQRGRKQRRQP 137
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 138 CTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 197
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 198 KGLSEDFHAKDSKPSSDAPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 257
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 258 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 303
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 304 EIGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 351
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C ++ T + R + E
Sbjct: 352 IKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRNPTQAIANRLKEMFE 411
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 412 -------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 463
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP E + + KVIE FIR E+ L
Sbjct: 464 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFTTEIFDVPLYHFYKVIEVFIRAEDGLC 522
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 523 REVVKHLNQIEEQILDHLAWKPESPLWEKI 552
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 777 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 836
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 837 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 896
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 897 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 956
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 957 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 1008
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1009 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1048
>gi|194390190|dbj|BAG61857.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 253/570 (44%), Gaps = 72/570 (12%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + N +L IL+ + ++++FF ++ ++
Sbjct: 12 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW------- 61
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG- 192
++ R + L+ NF +++ K Y+ I+++ F P + +Q
Sbjct: 62 -EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQP 120
Query: 193 -YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 121 CTVSEIFHFCWVLFICAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 180
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 181 KGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 240
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 241 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 286
Query: 361 ----------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 287 EIGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRY 334
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE 469
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 335 IKENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE 394
Query: 470 AIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 395 -------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS 446
Query: 530 SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L
Sbjct: 447 GILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLC 505
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSL 619
RE+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 506 REVVKHLNQIEEQILDHLAWKPESPLWEKI 535
>gi|348528825|ref|XP_003451916.1| PREDICTED: retinoblastoma-like protein 1 [Oreochromis niloticus]
Length = 1064
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 148/625 (23%), Positives = 270/625 (43%), Gaps = 96/625 (15%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF-WFAFVLYLVRR 86
L LC+ L++DE T E + N +AI N E + W A LY R
Sbjct: 23 LETLCQE-LNMDEQTATEAMD-----------NFTAIWNTYTLEGDVVHWLACSLYAACR 70
Query: 87 LSEKN--GENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWE 144
G+ L +G N +L ILR KL+++ FF ++ ++ +++ +
Sbjct: 71 KGSTPTVGKGLMEG---NCVSLTRILRSSKLSLIQFFSKMRKW--------ADMSKLSQD 119
Query: 145 NRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGDKQSAAAS---TSGYISDYHRF 200
RL + L+ NF +++ + ++ I+ + F P + +Q + +ISD +F
Sbjct: 120 FRLRMERLERNFEVSTVIFRKFEPIFMDMFQNPQGTDPPRQPRSRKHRRLPCHISDVFKF 179
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV-RFRNFNIHDSSRFVKKSNKG 259
W LF+ + + DLV + L+ L ++ + + R I+ + R + + +
Sbjct: 180 CWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPAAYRA 239
Query: 260 VDLIAS----------LCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
I+S LC ++D + + I + I + +K+ +
Sbjct: 240 DGHISSDEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFQKQILKGH-------- 291
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
D L+ L+D + + + ++Y+ G+ DERVF+ D
Sbjct: 292 ----DELL--TELLDPQNFIDNNKAINREYEEYVLTVGDFDERVFLGADAD--------- 336
Query: 369 GAVNITGAKRKFDSLASPVKTITSP-----LSPH--RSSASHPNGIAGGAT----SKMVV 417
+ + +P K + P L H +S++ P+ G ++V
Sbjct: 337 ------------EEIGTPRKIVQEPPASQQLQQHVEKSASLAPSTPLTGRVYLKEKDLLV 384
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TPVS+A + L++++ L + PS L + KSC +D T ++ R + +
Sbjct: 385 TPVSSATQSVSRLQSMVAGLRTAPSDHLMQIFKSCSRDPTESILTRVKTLGQTF-----K 439
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
G + +D +AE R A LYY++LE + E + L ++++ LL + F
Sbjct: 440 GHYTNDSEDTPGSHID--FAENRLKLAEILYYKILENVMVQETKRLPGRDMSVLLEQDIF 497
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
H ++AC E+VL + + FP ++ + F KVIE FIR EE L R++ +HLN
Sbjct: 498 HCSLMACCLEVVLFAYSS-QRTFPWIISVFKLAPFYFFKVIEVFIRSEEGLSRDMVKHLN 556
Query: 598 SLEERLLESMVWEKGSSMYNSLTVA 622
S+EE++LES W S+++ +L A
Sbjct: 557 SIEEQVLESRAWTADSALWRALQAA 581
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 76/297 (25%)
Query: 718 PLQSAF---ASPTRPNP--------GGGGETCAETGINIFFCKINKLAAVRINAMVERLQ 766
P+ + F ASP+RP G G + +FF K+ LA+VR+ + +L
Sbjct: 740 PVTAQFLLTASPSRPTAVATTSDTQAGNGRPRRTGSLALFFRKVYHLASVRLRDLCVKLD 799
Query: 767 LSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQ 826
+S +R ++ F+ L T L +RH+DQ++LC Y ++KI++ TF++I+ YR Q
Sbjct: 800 ISSDLRGKIWTCFEHSLVHCTDLMKDRHLDQLLLCSIYIISKITKETHTFQDIMKCYRSQ 859
Query: 827 PQCKPQVFRSVF---------------VDWASARQSGR---------------SEQDHVD 856
PQ V+RSV VD S +S E++ D
Sbjct: 860 PQANSHVYRSVLLRRTPREQVADENMEVDPVSGGESAEKTNQHSGDLNCSQSGGEEERGD 919
Query: 857 IITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL--PDM 914
+I FYN ++V +K + A NR +P +S FP++ +
Sbjct: 920 LIQFYNTVYVLKMKSFALRY-----ATSDNRAD------------APPLSPFPSVRAQPL 962
Query: 915 SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ---SPSKDLTDIN 968
SP+++S H++YVSP + S C+ +++ Y+ SPSK+L+DIN
Sbjct: 963 SPRRISQRHSLYVSPHKNSA-------------GCLTPNSYTYRINSSPSKELSDIN 1006
>gi|55727032|emb|CAH90273.1| hypothetical protein [Pongo abelii]
Length = 1097
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 144/611 (23%), Positives = 260/611 (42%), Gaps = 106/611 (17%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 46 QQRFDELCSR-LNMDEAARAEAWDSYRS----MSESYTLEGNDL------HWLACALYVA 94
Query: 85 RRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ N +L IL+ + ++++FF ++ ++ ++
Sbjct: 95 CR---KSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW--------EDMANLPP 143
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q +S+ F
Sbjct: 144 HFRERTERLERNFTVSAVIFKRYEPIFQDIFKYPQEEQPRQQRGRKQRRRPCTVSEIFHF 203
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGV 260
W+ F+ + GL +F+ DS K S+
Sbjct: 204 SWVPFIYAK---------------GLSE--------------DFHAKDS----KPSSDPP 230
Query: 261 DLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENIDTDGLIYFE 319
+I LCS++D + + I E I + +KK + E ENL
Sbjct: 231 CIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE---ENLTG---------- 277
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL----------LGSGSLSGG 369
++ + S + K Y+ + G LDER+F+ ED GSG+ +
Sbjct: 278 -FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCLNAGSGTETAE 336
Query: 370 AVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAK 428
V + ++ FD S I++PL+ G+ + VTPVSTA +
Sbjct: 337 RVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVTPVSTATHSLS 384
Query: 429 WLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG 488
L T++ L + PS +LE+ L++C +D T + R + E + +
Sbjct: 385 RLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IYSQHFQPDEDF 437
Query: 489 ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAEL 548
+N I ++ R + LYY+VLE++ E + L +L+ +L + FHR +LAC E+
Sbjct: 438 SNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEV 496
Query: 549 VLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMV 608
V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ +
Sbjct: 497 VTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLA 555
Query: 609 WEKGSSMYNSL 619
W+ S ++ +
Sbjct: 556 WKPESPLWEKI 566
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 52/283 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 791 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 850
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS------------- 847
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+S
Sbjct: 851 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRSSGSSDSRSHQNSP 910
Query: 848 -----GRSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
R+ +D ++ + + VP + P L A + M+ ++ +NN
Sbjct: 911 TELNIDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 970
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 971 IKQIKTFAMKYSQANVMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSP 1027
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
K +Y + SPSK L +IN + + + RG L
Sbjct: 1028 REKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1063
>gi|13592041|ref|NP_112356.1| retinoblastoma-like protein 2 [Rattus norvegicus]
gi|6685833|sp|O55081.1|RBL2_RAT RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=PPAR-alpha-interacting complex protein 128;
Short=PRIC128; AltName: Full=Retinoblastoma-related
protein 2; Short=RBR-2; AltName: Full=pRb2
gi|2760811|dbj|BAA24196.1| p130 [Rattus norvegicus]
Length = 1135
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 273/626 (43%), Gaps = 93/626 (14%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN-FNIHDSSRFVKKSNKG 259
W+LF I+A F + ++ LV+ +L+ + + + N + V + KG
Sbjct: 201 CWVLF----IYAKGNFPMI---SDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKG 253
Query: 260 VD----------------LIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASEC 302
V +I LCS++D + + I + I + +KK E
Sbjct: 254 VSEDGHPRDSHPSSDPPCVIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKLLRGKE- 312
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLL 361
ENL ++ + + S + K Y+ G LDER+F+ ED + +
Sbjct: 313 --ENLTG-----------FLEPGNFAESFKAVNKAYEEYVLATGSLDERIFLGEDAEEEV 359
Query: 362 GSGSLSGGAVNITGAKRKF---DSLA-----SPVKTITSPLSPHRSSASHPNGIAGGATS 413
G+ S A + T + + D L S + +PL+ G+ +
Sbjct: 360 GTFSRCVSAASGTESAERTQMRDILQQHLDKSKTLRVCNPLT----------GVRYVQEN 409
Query: 414 KMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP 473
VTPVSTA + L T++ L + PS +LE+ L+SC +D T + R + E I+
Sbjct: 410 SPCVTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-IYS 468
Query: 474 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+ V+ N + + R + LYY+VLE++ E + L +L+ +L
Sbjct: 469 QHFQPDENVS------NCAKEMANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLE 521
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+
Sbjct: 522 QDAFHKSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVV 580
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLN +EE++L+ + W+ S +++ +
Sbjct: 581 KHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 88/304 (28%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG----RSEQD--- 853
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG RS Q+
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 948
Query: 854 ---------------------------------------HVDI--------ITFYNKIFV 866
+ DI I FYN I+
Sbjct: 949 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGANSDIEEEERGDLIQFYNNIYR 1008
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHN 924
++ ++ A + M T P +S +P + SP++V S +H
Sbjct: 1009 KQIQTFAMKYSQANSQMDT-----------------PPLSPYPFVRTGSPRRVQLSQSHP 1051
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y+SP K +A++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1052 IYISP---HKNEAMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Query: 982 NFDD 985
DD
Sbjct: 1102 -LDD 1104
>gi|149032672|gb|EDL87542.1| retinoblastoma-like 2, isoform CRA_a [Rattus norvegicus]
Length = 1135
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 273/626 (43%), Gaps = 93/626 (14%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRN-FNIHDSSRFVKKSNKG 259
W+LF I+A F + ++ LV+ +L+ + + + N + V + KG
Sbjct: 201 CWVLF----IYAKGNFPMI---SDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKG 253
Query: 260 VD----------------LIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASEC 302
V +I LCS++D + + I + I + +KK E
Sbjct: 254 VSEDGHPRDSHPSSDPPCVIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKLLRGKE- 312
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLL 361
ENL ++ + + S + K Y+ G LDER+F+ ED + +
Sbjct: 313 --ENLTG-----------FLEPGNFAESFKAVNKAYEEYVLATGSLDERIFLGEDAEEEV 359
Query: 362 GSGSLSGGAVNITGAKRKF---DSLA-----SPVKTITSPLSPHRSSASHPNGIAGGATS 413
G+ S A + T + + D L S + +PL+ G+ +
Sbjct: 360 GTLSRCVSAASGTESAERTQMRDILQQHLDKSKTLRVCNPLT----------GVRYVQEN 409
Query: 414 KMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP 473
VTPVSTA + L T++ L + PS +LE+ L+SC +D T + R + E I+
Sbjct: 410 SPCVTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-IYS 468
Query: 474 SSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+ V+ N + + R + LYY+VLE++ E + L +L+ +L
Sbjct: 469 QHFQPDENVS------NCAKEMANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLE 521
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
+ FH+ +LAC E+V ++K FP + E + + KVIE FIR E+ L RE+
Sbjct: 522 QDAFHKSLLACCLEVVAFSYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVV 580
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSL 619
+HLN +EE++L+ + W+ S +++ +
Sbjct: 581 KHLNQIEEQILDHLAWKTKSPLWDRI 606
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 88/304 (28%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 830 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 889
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG----RSEQD--- 853
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG RS Q+
Sbjct: 890 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 948
Query: 854 ---------------------------------------HVDI--------ITFYNKIFV 866
+ DI I FYN I+
Sbjct: 949 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGANSDIEEEERGDLIQFYNNIYR 1008
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHN 924
++ ++ A + M T P +S +P + SP++V S +H
Sbjct: 1009 KQIQTFAMKYSQANSQMDT-----------------PPLSPYPFVRTGSPRRVQLSQSHP 1051
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y+SP K +A++S K +Y + SPSK L +IN + + + RG L
Sbjct: 1052 IYISP---HKNEAMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1101
Query: 982 NFDD 985
DD
Sbjct: 1102 -LDD 1104
>gi|1185008|gb|AAC52555.1| Rb-related p130 [Mus musculus]
Length = 1092
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 146/609 (23%), Positives = 260/609 (42%), Gaps = 102/609 (16%)
Query: 25 EARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLV 84
+ R +LC L++DE E +R + + + GN + W A LY+
Sbjct: 43 QQRFEELCSR-LNMDEAARAEAWSSYRS----MSESYTLEGNDL------HWLACALYVA 91
Query: 85 RRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
R K+ + +G+ + N +L ILR + ++++FF ++ ++ ++
Sbjct: 92 CR---KSVPTVSKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKW--------EDMANLPP 140
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSDANGDKQSAAASTSG--YISDYHRF 200
R + L+ NF +++ K Y+ I+++ F P + +Q S+ F
Sbjct: 141 HFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPCTTSEIFHF 200
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGV 260
W+LF+ + GL + + DS K S+
Sbjct: 201 CWVLFIYAK---------------GLSE--------------DCHPKDS----KASSDPP 227
Query: 261 DLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENIDTDGLIYFE 319
+I LCS++D + + I E I + +KK + E ENL
Sbjct: 228 CVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG---------- 274
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGS--LSGGAVNITGA 376
++ + S + K Y+ G LDERVF+ ED + +G+ S LS + +
Sbjct: 275 -FLEPGNFGESFKAVNKAYEEYVLAPGNLDERVFLGEDAEEEVGTLSRCLSAASGTESAE 333
Query: 377 KRKFDSL------ASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWL 430
+ + + S + +PL+ G+ + VTPVSTA + L
Sbjct: 334 RTQMRDILQQHLDKSKALRVCTPLT----------GVRYVQENSPCVTPVSTAAHSLSRL 383
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGAN 490
T++ L + PS +LER L+SC +D T + R + E + + +N
Sbjct: 384 HTMLSGLRNAPSEKLERILRSCSRDPTQAIADRLKEMYE-------IYSQHFQPDENFSN 436
Query: 491 LMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVL 550
I + R + LYY+VLE++ E + L +L+ +L ++ FHR +LAC E+V
Sbjct: 437 CAKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVA 495
Query: 551 ATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWE 610
+HK FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+
Sbjct: 496 FSHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWK 554
Query: 611 KGSSMYNSL 619
S +++ +
Sbjct: 555 TKSPLWDRI 563
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 134/292 (45%), Gaps = 64/292 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 787 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 846
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE--------- 851
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG SE
Sbjct: 847 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSSESRSHQNSRA 905
Query: 852 --------QDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTN-------------- 886
+D ++ + + VP + P L A + ++
Sbjct: 906 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYR 965
Query: 887 --------RVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMD 936
+ S+ N D +P +S +P + SP++V S +H +Y+SP +
Sbjct: 966 KQIQAFAMKYSQANAQTD-----TPPLSPYPFVRTGSPRRVQLSQSHPIYISP---HNNE 1017
Query: 937 ALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
A+ S K +Y + SPSK L +IN + + + RG L DD
Sbjct: 1018 AMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL-LDD 1061
>gi|357631172|gb|EHJ78820.1| putative retinoblastoma-like protein 1 isoform a [Danaus plexippus]
Length = 961
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 209/963 (21%), Positives = 388/963 (40%), Gaps = 178/963 (18%)
Query: 26 ARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVR 85
A + +LC L+VD K+ + + E K N + G+ E W A LY+
Sbjct: 13 ATMDNLCSQ-LNVDPGAAKKSKESYSEIKQ----NYTLDGD------ELHWMACALYVAC 61
Query: 86 RLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
R S + N +L +LR+ ++++ FF ++ ++ + D+++
Sbjct: 62 RTSITPTVQSGKAVEGNCVSLTRLLRLCNISLIQFFNKIKNWMEMAS------MSTDFKD 115
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFF-------LPSDANGDKQSAAASTSGYISDYH 198
R+ L+ F ++L + ++ I++E F + S+ KQ T+ + +
Sbjct: 116 RI--TRLERKFAVSTVLFRKFQPIFQEIFSGLTNEPVKSNTKSKKQKLQPCTTNALFE-- 171
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
F W L++ ++ + DLV + L+S L + F N + + + K
Sbjct: 172 -FSWCLYVCVKGEFHNSADDLVDMYHVLLSCLDFV-------FANAFMARRYDVINPAFK 223
Query: 259 GVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSEN----LENIDTDG 314
G L S + + +L K +++ +I + EA+ K + ++ G
Sbjct: 224 G------LPSDWLKDDFELPKKPPCIISVLCEIKEGLAVEAATMKEYSWRPVIKTFFDKG 277
Query: 315 LIYFEN-----LMDDSSLSSSLNILEKDYDNATRNKGELDERVFINE--DDSLLGSGSLS 367
++ N L+D + ++L L Y+ + GE DER+F+ E ++ + +S
Sbjct: 278 ILKGNNDQLTGLLDIGNFDANLKSLNNLYETYVLSVGEFDERIFLGEHANEQIGTKNKVS 337
Query: 368 GGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTA 427
G ++ A S A P +PL+ R A +TPVS A +
Sbjct: 338 GDEISQVIASFGPSSRACP----DTPLTGRRYLARREE-----------LTPVSEATNSL 382
Query: 428 KWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQ 487
L ++ KPS L RF C D T I+ + P +G E+ + SL
Sbjct: 383 ARLAALLRQARPKPSPTLLRFFADCGVDKVT-------IVKNVVQPCNGWMEK-FSESLS 434
Query: 488 GANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAE 547
N A + + LYY+V E + T E + +L LL+ E F + AC E
Sbjct: 435 ECNCSKETIAFRCNMVTC-LYYKVFEHIITEEHRKKPQLSLQILLSQETFQLTVYACCTE 493
Query: 548 LVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRH-EESLPRELRRHLNS--LEERLL 604
+VL + ++ FP VL+ G++AF K+IE ++ + L R++ +HLN+ L +
Sbjct: 494 VVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQAVVQKLSRDVIKHLNAILLSQETF 553
Query: 605 ESMVWE-----------------------KGSSMYNSLTVARPVLSAEINRLGLLADPMP 641
+ V+ G S ++ + V+ A + +L D +
Sbjct: 554 QLTVYACCTEVVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQAVVQKLS--RDVIK 611
Query: 642 SLDAIATHI--------------NFSSGGLSPVHSLHKHETSPGQNGD-IRSPKR----- 681
L+A+ + S + ++ ++ +N ++SP
Sbjct: 612 HLNAVEEQVLESLVWTSDSPLWDQLSKNPIPAAIEVYAQDSPNRRNASGLQSPISAAIDR 671
Query: 682 ---PCTDYRSVLVERNNFTSPVKDRLLGLN-NLKSKPLPPPLQSAFASPTRPNPGGGGET 737
P D + ++N P + L+ N N+K +P P+ S + T PN
Sbjct: 672 YLTPMADQAKKQLFKDNI-KPGQSLLVQTNNNVKQEPQQVPIVS--TAETTPNTTPKK-- 726
Query: 738 CAETGINIFFCKINKLAAVRINAMVERLQLS-QQIRESVY-CLFQQILNQRTSLFFNRHI 795
A + +FF K LA +R+N + RL+L+ +++ ++ C+ ++NQ T L + +
Sbjct: 727 -ANNSLILFFRKFYSLAVIRMNDLCTRLKLTDDELKRKIWTCVEHSVMNQ-TQLMRDSN- 783
Query: 796 DQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV 855
Q+ TF +I+ YR++P V+RSV ++ + +S +
Sbjct: 784 ---------------QVERTFADIMRCYRQRPLADNHVYRSVLINKGNDEES----PERG 824
Query: 856 DIITFYNKIFVPAVKPLLVELG------------PAGTAMKTNRVSEVNHNNDGPCPGSP 903
D+I FYNK++V ++ + PAG A ++ R G PG
Sbjct: 825 DLINFYNKVYVKCMQNFALRFTGKHKDGCSLSPLPAGRAGRSGR--------SGWSPGGQ 876
Query: 904 KVS 906
+VS
Sbjct: 877 RVS 879
>gi|347378|gb|AAA36397.1| p107, partial [Homo sapiens]
Length = 935
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 166/352 (47%), Gaps = 53/352 (15%)
Query: 319 ENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKR 378
E L+D SS + + + K+Y+ G+ DER+F+ D A G R
Sbjct: 154 ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------------AEEEIGTPR 201
Query: 379 KFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMVVTPVSTAMTT 426
KF + +P+ +T+ + + H A S + V+TPV++A +
Sbjct: 202 KF-TRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQS 260
Query: 427 AKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
L++++ L + PS +L +SC ++ ++M+ IL+ G+GE
Sbjct: 261 VSRLQSIVAGLKNAPSDQLINIFESCVRNPVENIMK----ILK------GIGETFCQHYT 310
Query: 487 QGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
Q + +A R A LYY++LE + E + LH +++ LL + FHR ++A
Sbjct: 311 QSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMA 370
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERL 603
C E+VL + + FP ++E + F KVIE IR EE L R++ +HLNS+EE++
Sbjct: 371 CCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQI 429
Query: 604 LESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
LES+ W S+++ +L V+ A+ +P+ + + NF +G
Sbjct: 430 LESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFETG 467
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 65/292 (22%)
Query: 724 ASPTRPNPGGGGETCAETGIN---------IFFCKINKLAAVRINAMVERLQLSQQIRES 774
ASP + N E + TGIN +F+ K+ LA+VR+ + +L +S ++R
Sbjct: 628 ASPKQTNLTKAQEVHS-TGINRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRK 686
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+
Sbjct: 687 IWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVY 746
Query: 835 RSVFV-----------------------DWASARQ-----SGRSEQDHVDIITFYNKIFV 866
RSV + D A + SG +++ D+I FYN I+V
Sbjct: 747 RSVLLKSIPREVVAYNKNINDDFEMIDCDLEDATKTPDCSSGPVKEERSDLIKFYNTIYV 806
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHN 924
VK A+K + ++ +H D P P SP FP + SP+++S H+
Sbjct: 807 GRVKSF---------ALKYDLANQ-DHMMDAP-PLSP----FPHIKQQPGSPRRISQQHS 851
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+Y+SP K + ++ S Y G SPSK L DIN+ + +
Sbjct: 852 IYISP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMIRQGEQ 893
>gi|254972110|gb|ACT98283.1| rb-like protein [Schmidtea mediterranea]
Length = 1019
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 222/1053 (21%), Positives = 412/1053 (39%), Gaps = 221/1053 (20%)
Query: 27 RLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRR 86
R DLC + L ++ +E ++E N G+ + W LY R
Sbjct: 18 RFEDLCVD-LCIESTVKEEAWDKYKEVS----TNYCIDGDQLQ------WLVCALYECVR 66
Query: 87 LSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S + N S DN + +L +L V K++ V FF + ++ +++ + E
Sbjct: 67 KSTTDNIN----SLDNTYVSLARLLSVSKMSFVQFFHRISKW--------ADMVDMNEEL 114
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISD--YHRFGWL 203
R + +++ F +++ Y + E F D + QS +D RF WL
Sbjct: 115 RDRIERIESQFSVSAVIFDKYITGFYEIFQKIDESHGGQSMEEKFKVLCTDEELFRFTWL 174
Query: 204 LFLALRIHAFSRFKD------LVTCT------NGLVSILAILIIH----VPVRFRNFNIH 247
L++ ++ + + D L+ CT N L+S L +P F N N
Sbjct: 175 LYIKIKTNFPAICGDIILSFQLLLCTLDWIASNALISKSKQLFNSSFRGLPSDFHNRNWK 234
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSEN 306
RF ++ +C D + D + + I +L+K+ + E K +N
Sbjct: 235 APERFPT-------VLKFICESNDMNYIDCKSTRDSFFRNYIEKLLEKEVIKGRETKEDN 287
Query: 307 LEN-----IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED---- 357
+ + ++ G++ NL + ++S G+ DER+++N +
Sbjct: 288 VLSSVNFEFNSRGIM---NLYGEYMMAS----------------GDFDERIYLNPNALEE 328
Query: 358 --------DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
+ ++ S L+ A+ ++ V T + P A N +A
Sbjct: 329 IGSVNSRANEMMLSSDLTPSAMRYMQEVINCGAVPGSVDTRKATAKP---CAGKHNTVAS 385
Query: 410 GATSKM----VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS-CDKDVTTDVMRRA 464
G S++ + + + +L ++ + S EL L++ C D++ R
Sbjct: 386 GVVSRLNGGVSFNNYDSRVINSNYLIALLSKRQAYASEELTGMLQTHCFYSPMEDIITRL 445
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAE---QRRLEALKLYYRVLEAMCTAEAQ 521
L +F S+ G + + L + QR K+YY LE + +E
Sbjct: 446 DK-LSLLFLSAYNG-KFIDYKTDLRILFQKKQTDPSLQRCQTTHKIYYYALEMILKSEIS 503
Query: 522 VLHAK------------------NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAV 563
+ + ++++LL + FHR + A E+VL + + FP V
Sbjct: 504 KIELRYKMRSRNSEAGEIKLNNIDISALLKKDEFHRALYAICVEIVLICSDS-SKHFPWV 562
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAR 623
LE + A K++E F+R + LPRE+ ++ + + E L++S W S++++SL AR
Sbjct: 563 LEVLELQAVHFYKIVEIFMRCVD-LPREMVKYFSQVSENLVDSYSWRSDSTLWDSL--AR 619
Query: 624 PVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPC 683
+ PS+D + +P + E S Q
Sbjct: 620 -------------SGKAPSIDEV-----------TPPERI---EQSFKQGN--------- 643
Query: 684 TDYRSVLVERNNFTSPVKDRLLGLNNL-KSKPLPPPLQSAFASPTRPNPGGGGETCA--- 739
+ ++VE N + K ++ L S PL +Q++ S +
Sbjct: 644 ---KKLIVESNRERTVTKSSMITGRRLGTSAPLNQNIQNSQGSFRHEDDESARAAAQLLS 700
Query: 740 ----ETGINIFFCKINKL----AAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFF 791
E N+ +KL +++R+ + +RL +S+ + ++ F+ I+ + T L
Sbjct: 701 ANDDEKQENVEIETSHKLMYFLSSLRLRDICDRLHISRDLMCKIWTTFEHIITEETHLLK 760
Query: 792 NRHIDQIILCCFYGVAKI-SQLNLTFREIIYNYRKQPQCKPQVFRSVFVDW--------- 841
+R IDQ+ILCC + V ++ S NL F EI+ YR QPQ +++RSV ++
Sbjct: 761 DRCIDQVILCCIFAVTRVASSRNLAFHEILQMYRMQPQSTREIYRSVLIESVKTNTGITT 820
Query: 842 ---------------ASARQSGRSEQDHVDIITFYNKIFVPA----VKPLLVELGPAGTA 882
++ R+++ DI FYN +F+P VK L+ +G+
Sbjct: 821 GGLPTDCKTNVHTSPGGTQRLIRTKEVRDDITRFYNHVFLPTVHNYVKRFLINYLMSGSN 880
Query: 883 MK---TNRVSEVNHNNDGPCPGSPKVSVFPALPDM------SPKKVSATHNVYVSPLRTS 933
+ T S ++ ++ P P +S P + + +++S N++VSP +T
Sbjct: 881 VSVSLTGPNSNLSKSSSQPQLNQPHLSPMPIRNNFDQILGSTSRRISNNKNIFVSPAKTQ 940
Query: 934 KMDALISHSSKSYYACVGESTHAYQSPSKDLTD 966
I+ S K V SPSK+L D
Sbjct: 941 -----ITMSPKRVTFTVN------SSPSKELRD 962
>gi|219362811|ref|NP_001137012.1| uncharacterized protein LOC100217179 [Zea mays]
gi|194697978|gb|ACF83073.1| unknown [Zea mays]
Length = 109
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 79/100 (79%), Gaps = 8/100 (8%)
Query: 914 MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNS 973
MSPKKVSATHNVYVSPLR+SKMD L+S S KSYYACVGEST+A+QSPSKDL IN+RLNS
Sbjct: 1 MSPKKVSATHNVYVSPLRSSKMDTLLSPSPKSYYACVGESTYAFQSPSKDLKAINNRLNS 60
Query: 974 NRRVRGTLNFDDVDVDVGLVSDSMVANSLY-LQNGSAAAS 1012
++V G LNFD +VSD +VA+SL +QN AA+
Sbjct: 61 WKKVSGRLNFD-------IVSDLVVASSLNGVQNAKPAAT 93
>gi|149049942|gb|EDM02266.1| retinoblastoma 1 [Rattus norvegicus]
Length = 815
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 77/346 (22%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----------LEKDYDNATRNK 345
C+ EC N+D +YF+N + SSL I L K Y+
Sbjct: 166 CKEHEC------NVDEVKNVYFKNFI---PFISSLGIVSSNGLPELESLSKRYEEVYLKS 216
Query: 346 GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPN 405
+LD R+F++ D +L T F++ +P K S+P+
Sbjct: 217 KDLDARLFLDHDKTLQ------------TDTIDSFETERTPRK-------------SNPD 251
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR-- 463
A T TPV T M T + L ++ +PS L + +C + ++++R
Sbjct: 252 EEANMVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVK 308
Query: 464 --AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ 521
HI E +S +G+ C+ +I A++ +L ++LYYRV+E+M +E +
Sbjct: 309 DVGHIFKEKF--ASAVGQGCI-----------DIGAQRYKL-GVRLYYRVMESMLKSEEE 354
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML----------FPAVLERTGITA 571
L +N + LL + FH +LAC+ E+V+AT+ + +ML FP +L + A
Sbjct: 355 RLSIQNFSKLLNDNIFHMSLLACALEVVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKA 413
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
FD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 414 FDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFD 459
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 52/228 (22%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQ--Q 770
S TR N ET A T +++F+ K+ +LA +R+N + RL LS +
Sbjct: 504 TSTTRVNSAANTETQAASAFHTQKPLKSTSLSLFYKKVYRLAYLRLNTLCARL-LSDHPE 562
Query: 771 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 830
+ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 563 LEHIIWTLFQHTLENEYELMKDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAA 622
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
+ F+ V + E++ II FYN +F+ +K +++
Sbjct: 623 QETFKRVLI----------REEEFDSIIVFYNSVFMQRLKTNILQYAST----------- 661
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLRT 932
P +S P +P SP K S++ N+Y+SPL++
Sbjct: 662 ----------RPPTLSPIPHIP-RSPYKFSSSPLRIPGGNIYISPLKS 698
>gi|603962|dbj|BAA04958.1| retinoblastoma protein [Rattus norvegicus]
Length = 899
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 77/346 (22%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----------LEKDYDNATRNK 345
C+ EC N+D +YF+N + SSL I L K Y+
Sbjct: 250 CKEHEC------NVDEVKNVYFKNFI---PFISSLGIVSSNGLPELESLSKRYEEVYLKS 300
Query: 346 GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPN 405
+LD R+F++ D +L T F++ +P K S+P+
Sbjct: 301 KDLDARLFLDHDKTLQ------------TDTIDSFETERTPRK-------------SNPD 335
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR-- 463
A T TPV T M T + L ++ +PS L + +C + ++++R
Sbjct: 336 EEANMVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVK 392
Query: 464 --AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ 521
HI E +S +G+ C+ +I A++ +L ++LYYRV+E+M +E +
Sbjct: 393 DVGHIFKEKF--ASAVGQGCI-----------DIGAQRYKL-GVRLYYRVMESMLKSEEE 438
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML----------FPAVLERTGITA 571
L +N + LL + FH +LAC+ E+V+AT+ + +ML FP +L + A
Sbjct: 439 RLSIQNFSKLLNDNIFHMSLLACALEVVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKA 497
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
FD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 498 FDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFD 543
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 50/227 (22%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQQIR 772
S TR N ET A T +++F+ K+ +LA +R+N + RL
Sbjct: 588 TSTTRVNSAANTETQAASAFHTQKPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPEP 647
Query: 773 ESV-YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKP 831
E + + LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 648 EHIIWTLFQHTLENEYELMKDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQ 707
Query: 832 QVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEV 891
+ F+ V + E++ II FYN +F+ +KTN +
Sbjct: 708 ETFKRVLI----------REEEFDSIIVFYNSVFM--------------QRLKTNI---L 740
Query: 892 NHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLRT 932
+ + P P +S P +P SP K S++ N+Y+SPL++
Sbjct: 741 QYASTRP----PTLSPIPHIP-RSPYKFSSSPLRIPGGNIYMSPLKS 782
>gi|297283996|ref|XP_002802522.1| PREDICTED: retinoblastoma-like protein 2-like [Macaca mulatta]
Length = 1072
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 200/448 (44%), Gaps = 57/448 (12%)
Query: 194 ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRN 243
+S+ F W+LF+ + + DLV + L+ L ++ + V F+
Sbjct: 130 VSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNCNFKG 189
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASEC 302
+ ++ K S+ +I LCS++D + + I E I + +KK + E
Sbjct: 190 LSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE- 248
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL-- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 249 --ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEI 295
Query: 361 --------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGA 411
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 296 GTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYIK 343
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 344 ENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-- 401
Query: 472 FPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
+ + +N I ++ R + LYY+VLE++ E + L +L+ +
Sbjct: 402 -----IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGI 455
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L RE
Sbjct: 456 LEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFEVPLYHFYKVIEVFIRAEDGLCRE 514
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 515 VVKHLNQIEEQILDHLAWKPESPLWEKI 542
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 767 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 826
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 827 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 886
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 887 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 946
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 947 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 998
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 999 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 1038
>gi|281332095|ref|NP_058741.1| retinoblastoma-associated protein [Rattus norvegicus]
Length = 920
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 77/346 (22%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----------LEKDYDNATRNK 345
C+ EC N+D +YF+N + SSL I L K Y+
Sbjct: 271 CKEHEC------NVDEVKNVYFKNFI---PFISSLGIVSSNGLPELESLSKRYEEVYLKS 321
Query: 346 GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPN 405
+LD R+F++ D +L T F++ +P K S+P+
Sbjct: 322 KDLDARLFLDHDKTLQ------------TDTIDSFETERTPRK-------------SNPD 356
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR-- 463
A T TPV T M T + L ++ +PS L + +C + ++++R
Sbjct: 357 EEANMVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVK 413
Query: 464 --AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ 521
HI E +S +G+ C+ +I A++ +L ++LYYRV+E+M +E +
Sbjct: 414 DVGHIFKEKF--ASAVGQGCI-----------DIGAQRYKL-GVRLYYRVMESMLKSEEE 459
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML----------FPAVLERTGITA 571
L +N + LL + FH +LAC+ E+V+AT+ + +ML FP +L + A
Sbjct: 460 RLSIQNFSKLLNDNIFHMSLLACALEVVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKA 518
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
FD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 519 FDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFD 564
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 50/227 (22%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQQIR 772
S TR N ET A T +++F+ K+ +LA +R+N + RL
Sbjct: 609 TSTTRVNSAANTETQAASAFHTQKPLKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPEP 668
Query: 773 ESV-YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKP 831
E + + LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 669 EHIIWTLFQHTLENEYELMKDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAAQ 728
Query: 832 QVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEV 891
+ F+ V + E++ II FYN +F+ +KTN +
Sbjct: 729 ETFKRVLI----------REEEFDSIIVFYNSVFM--------------QRLKTNI---L 761
Query: 892 NHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLRT 932
+ + P P +S P +P SP K S++ N+Y+SPL++
Sbjct: 762 QYASTRP----PTLSPIPHIP-RSPYKFSSSPLRIPGGNIYMSPLKS 803
>gi|288558841|sp|P33568.3|RB_RAT RecName: Full=Retinoblastoma-associated protein; AltName: Full=pRb;
Short=Rb; AltName: Full=pp105
Length = 920
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 161/346 (46%), Gaps = 77/346 (22%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----------LEKDYDNATRNK 345
C+ EC N+D +YF+N + SSL I L K Y+
Sbjct: 271 CKEHEC------NVDEVKNVYFKNFI---PFISSLGIVSSNGLPELESLSKRYEEVYLKS 321
Query: 346 GELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPN 405
+LD R+F++ D +L T F++ +P K S+P+
Sbjct: 322 KDLDARLFLDHDKTLQ------------TDTIDSFETERTPRK-------------SNPD 356
Query: 406 GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR-- 463
A T TPV T M T + L ++ +PS L + +C + ++++R
Sbjct: 357 EEANMVTPH---TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVK 413
Query: 464 --AHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQ 521
HI E +S +G+ C+ +I A++ +L ++LYYRV+E+M +E +
Sbjct: 414 DVGHIFKEKF--ASAVGQGCI-----------DIGAQRYKL-GVRLYYRVMESMLKSEEE 459
Query: 522 VLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML----------FPAVLERTGITA 571
L +N + LL + FH +LAC+ E+V+AT+ + +ML FP +L + A
Sbjct: 460 RLSIQNFSKLLNDNIFHMSLLACALEVVMATY-SRSMLQNLDSGTDLSFPWILNVLNLKA 518
Query: 572 FDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
FD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 519 FDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFD 564
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 52/228 (22%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQ--Q 770
S TR N ET A T +++F+ K+ +LA +R+N + RL LS +
Sbjct: 609 TSTTRVNSAANTETQAASAFHTQKPLKSTSLSLFYKKVYRLAYLRLNTLCARL-LSDHPE 667
Query: 771 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 830
+ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 668 LEHIIWTLFQHTLENEYELMKDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAA 727
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
+ F+ V + E++ II FYN +F+ +KTN
Sbjct: 728 QETFKRVLI----------REEEFDSIIVFYNSVFM--------------QRLKTNI--- 760
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------HNVYVSPLRT 932
+ + + P P +S P +P SP K S++ N+Y+SPL++
Sbjct: 761 LQYASTRP----PTLSPIPHIP-RSPYKFSSSPLRIPGGNIYISPLKS 803
>gi|221044944|dbj|BAH14149.1| unnamed protein product [Homo sapiens]
Length = 518
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 178/389 (45%), Gaps = 51/389 (13%)
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASE 301
+F+ DS K S+ +I LCS++D + + I E I + +KK +
Sbjct: 44 DFHAKDS----KPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKG-- 97
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL- 360
K ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 98 -KEENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEE 145
Query: 361 ---------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 146 IGTLSRCLNAGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYI 193
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 194 KENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE- 252
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ + +N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 253 ------IYSQHFQPDEDFSNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSG 305
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
+L + FHR +LAC E+V ++K FP + E + + KVIE FIR E+ L R
Sbjct: 306 ILEQDAFHRSLLACCLEVVTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCR 364
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S ++ +
Sbjct: 365 EVVKHLNQIEEQILDHLAWKPESPLWEKI 393
>gi|432101428|gb|ELK29610.1| Retinoblastoma-like protein 1 [Myotis davidii]
Length = 1931
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 45/348 (12%)
Query: 319 ENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGS----------GSLS 367
E L+D S+ + + + K+Y+ G+ DER+F+ D D +G+ G L+
Sbjct: 1165 ECLLDFSNFTDNSKAVNKEYEEYVLTVGDFDERIFLGADADEEIGTPRKFAGDTPLGKLT 1224
Query: 368 GGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTA 427
A ++ F+ KT +P +P G + ++TPV++A +
Sbjct: 1225 AQANVEYNLQQHFEK-----KTSFAPSTPL-------TGRRYLREKEAIITPVASATQSV 1272
Query: 428 KWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQ 487
L++++ L + PS +L +SC ++ ++M+ I E + Q
Sbjct: 1273 SRLQSIVTGLKTAPSEQLINIFESCMRNPMENIMKIVKEIGETF-----CQHYTQSTDEQ 1327
Query: 488 GANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAE 547
+ +D +A R A LYY++LE + E + LH +++ LL + FHR ++AC E
Sbjct: 1328 PGSHID--FAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLE 1385
Query: 548 LVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESM 607
+VL + + FP ++E + F KVIE IR EE L R++ +HLNS+EE++LES+
Sbjct: 1386 IVLFAYSS-PRTFPWIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESL 1444
Query: 608 VWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
W S+++ +L + A+ +P+ + + NF +G
Sbjct: 1445 AWNHDSALWEALQAS--------------ANKVPTCEEVIFPNNFETG 1478
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 40/274 (14%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 1641 PKQTHLTKAQEVHPTGISRPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 1700
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 1701 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 1760
Query: 838 FVD-------WASARQSGRSE------QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMK 884
+ + + +G E ++ D+I FYN I+V VK A+K
Sbjct: 1761 LLKSIPREIVAYNKKVNGDFEMTDCVREERGDLIKFYNTIYVGRVKSF---------ALK 1811
Query: 885 TNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHS 942
+ +S +H + P P SP FP + SP+++S H+VYVSP K + ++
Sbjct: 1812 YD-LSNQDHMMEAP-PLSP----FPHIKQQPSSPRRISQQHSVYVSP---HKNGSGLTPR 1862
Query: 943 SKSYYACVGESTHAYQSPSKDLTDINHRLNSNRR 976
+ Y G SPSK L DIN+ + +
Sbjct: 1863 TALLYKFNG-------SPSKSLKDINNMIRQGEQ 1889
>gi|194696912|gb|ACF82540.1| unknown [Zea mays]
Length = 110
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 82/114 (71%), Gaps = 10/114 (8%)
Query: 914 MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNS 973
MSPKKVSATHNVYVSPLR+SKMD L+S SSKSYYACVGEST+A+QSPSKDL IN+RLNS
Sbjct: 1 MSPKKVSATHNVYVSPLRSSKMDTLLSPSSKSYYACVGESTYAFQSPSKDLKAINNRLNS 60
Query: 974 ---NRRVRGTLNFDDVDVDVGLVSDSMVANSLYLQNGSAAASTCAVLKPEQPDP 1024
++V G LNFD +VSD +VA+SL + A+ A P + +P
Sbjct: 61 VSGGKKVSGRLNFD-------VVSDLVVASSLGSDRDAKPAADPAKTTPVKCEP 107
>gi|328718292|ref|XP_001943094.2| PREDICTED: retinoblastoma-like protein 1-like [Acyrthosiphon pisum]
Length = 697
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 159/686 (23%), Positives = 286/686 (41%), Gaps = 108/686 (15%)
Query: 16 SNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERF 75
+N D D + DLCK GL++D+N + + K N S +G P
Sbjct: 7 TNVLDEDIYNNKFLDLCK-GLNLDKNAASRAWETYLAVKE----NYSL--DGDPSH---- 55
Query: 76 WFAFVLYLV-RRLSEK---NGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
W A +Y+ R ++E + E L +G N +L +LR+ ++++ F + ++
Sbjct: 56 WLACAIYVACRNVTEHTVGDSETLIEG---NLVSLTRLLRLCNISLIHFIGKSKKW---- 108
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF--LPSDANGDKQSAAAS 189
+++ E R + +L+ NF ++ K ++ I+ F + + S
Sbjct: 109 ----ADMINMPPELRRKIDKLEKNFAVSMVIFKKFQPIFAAMFNNTKDEQTKTRCSKKQK 164
Query: 190 TSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS 249
+ S F W LF+ + S F DL + LV+ +L+ + N I D
Sbjct: 165 VTCSASKLFEFCWTLFVVAK----SEFPDL---SENLVNSYHLLLACCDYVYTNILIADL 217
Query: 250 SRFVKKS----------------NKGVDLIASLCSIYDTSEDDLRKIME---KTNTLIAD 290
+ KS +K + +I LC YD D + I E KTN
Sbjct: 218 RDLLNKSFGGLPHDFESTSYVLRSKPICIIDYLCQQYDGITTDAKVIKEYFWKTNL---- 273
Query: 291 ILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDE 350
KK E K ++ N+ L+D + + + K Y+ + GE DE
Sbjct: 274 ---KKLIERKILKGDSELNL----------LLDVVNFDFNYKAINKRYEQYVLSVGEFDE 320
Query: 351 RVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
R+F++E+ ++ GA N + LA +K + L ++ + N +
Sbjct: 321 RIFLSEN------ANIEIGASNECTT----EDLAKEMKNKKNNLFNQQTPLTGRNHLKPK 370
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
TPV A +++++ PS +L LKSC + ++ +I+
Sbjct: 371 IDLSDESTPVKNASEMVFKIQSILADCSPYPSDKLYTLLKSCSATLQGEIENLINIL--- 427
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
G+ + + + N +AE+R + A +Y++ E + EA+ ++ +
Sbjct: 428 -----GIKFCSQYCQVDHNSALHNDFAEKRLIMAKTWFYKLFENIIAKEAKN-PKYDIKN 481
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
L+ + FH + AC E+V+ + + FP VL I + KVIE +R E+ LPR
Sbjct: 482 LICHAVFHETLFACCLEMVIFAYNS-QRAFPWVLNALQIHPYHFYKVIEVIVRVEDKLPR 540
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHI 650
++ +HLN +EE++L+S+ W+ S +++ INR L +P D IA +
Sbjct: 541 DMIKHLNRVEEQVLDSLSWQSESPLWDL-----------INRNNKL---IPHYDEIA--L 584
Query: 651 NFSSGGLSPVHSL-HKHETSPGQNGD 675
+GG +PV + HK E + + D
Sbjct: 585 VSVAGGAAPVSNFNHKIENNCFAHKD 610
>gi|307107595|gb|EFN55837.1| expressed protein [Chlorella variabilis]
Length = 1002
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 12/208 (5%)
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD--VMRRAHIILEAIFPSSGL 477
++ AM++A WL+ + P +L +++ D + ++ A + +A FP
Sbjct: 161 ITAAMSSAAWLQGTVAGQGEGPPPQLRALMQAAGMDAGAEARLVAAAEGMAKAAFPD--- 217
Query: 478 GERCVTGSLQGANL-MDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHA--KNLTSLLTN 534
L G L ++ RR + L+LY+RVL+++ AEA A +LL
Sbjct: 218 ----CPAPLDGPLLALEQSTTAARRSQGLRLYWRVLQSLVAAEAGRPDAGPAAAAALLAA 273
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
HRC+ AC+ E V+++++ V + FPAVLER + AFDL K +E F+ +LPR+L+R
Sbjct: 274 PLLHRCVAACALECVISSYRMVNLAFPAVLERLSLPAFDLCKAVEPFVHALPTLPRDLKR 333
Query: 595 HLNSLEERLLESMVWEKGSSMYNSLTVA 622
H+ ++EER LES+ W +GSS+Y +L A
Sbjct: 334 HMLAVEERCLESLAWAQGSSLYPTLIAA 361
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 37/163 (22%)
Query: 735 GETCAETGINIFFCKINKLAAVRINAMVERLQ--------LSQQIRE------------- 773
G+ A + +N F ++ KLAA+R+ ++ RL L ++R
Sbjct: 541 GDRSARSAVNKFLRRVLKLAAIRLADLLSRLDTHPADPHVLLAEVRRRQGAGLGLAKAGL 600
Query: 774 --------SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLN-LTFREIIYNYR 824
+ + L Q + ++T L + RH+DQ +LCC Y V K+ QL +F+ II Y+
Sbjct: 601 GLAHSGGIAAFTLAQHVAFEQTWLLYGRHLDQALLCCLYSVCKLHQLGQASFKAIIAAYK 660
Query: 825 KQPQCKPQVFRSVFVDWASARQSGRSEQDH----VDIITFYNK 863
+Q Q + F+SV + R+ Q H DIITFYN+
Sbjct: 661 QQAQAQADTFKSVSMR---PREHTTLHQLHPTATADIITFYNQ 700
>gi|355754692|gb|EHH58593.1| pRb, partial [Macaca fascicularis]
Length = 727
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 156/353 (44%), Gaps = 71/353 (20%)
Query: 285 NTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNILEK 336
+T I ++L C+ EC NID +YF+N M+ L +S + L K
Sbjct: 69 DTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVESLSK 118
Query: 337 DYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP 396
Y+ +LD R+F++ D +L + S+ T K D + + P
Sbjct: 119 RYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PP 170
Query: 397 HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDV 456
H TPV T M T + L ++ +PS L + +C +
Sbjct: 171 H--------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNP 210
Query: 457 TTDVMRRAH---IILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLE 513
+++R I + F + +G+ CV QR ++LYYRV+E
Sbjct: 211 KESILKRVKDIGYIFKEKF-AKAVGQGCVE------------IGSQRYKLGVRLYYRVME 257
Query: 514 AMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVL 564
+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 258 SMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWIL 317
Query: 565 ERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 318 NVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFD 370
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 40/222 (18%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQ--Q 770
S TR N ET A T +++F+ K+ +LA +R+N + ERL LS+ +
Sbjct: 416 GSTTRVNSTANAETQATSAFQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPE 474
Query: 771 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 830
+ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 475 LEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAV 534
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
+ F+ V + E+++ II FYN +F+ +K +++ + + +S
Sbjct: 535 QETFKRVLI----------KEEEYDSIIVFYNSVFMQRLKTNILQYA----STRPPTLSP 580
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRT 932
+ H P SP FP+ SP ++ N+Y+SPL++
Sbjct: 581 IPH-----IPRSP--YKFPS----SPLRIPGG-NIYISPLKS 610
>gi|260800656|ref|XP_002595214.1| hypothetical protein BRAFLDRAFT_135823 [Branchiostoma floridae]
gi|229280458|gb|EEN51226.1| hypothetical protein BRAFLDRAFT_135823 [Branchiostoma floridae]
Length = 305
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 168/374 (44%), Gaps = 95/374 (25%)
Query: 529 TSLLTNERFHRCMLACSAELVLATHKTVT----------ML-----------FPAVLERT 567
++LL + FHR +LACS E+++ T+ + + ML FP +L+
Sbjct: 1 SNLLNKDTFHRSLLACSVEVIMTTYGSASINTYFISGTPMLYTMATTDTNTSFPWILDVF 60
Query: 568 GITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLS 627
+ A+D KV+E+FI E L +E+ +HL +E ++LE + W +GS +Y + +L+
Sbjct: 61 ELKAYDFFKVLETFILAEPKLTKEVIKHLQHIENKILERVAWREGSPLYEA------ILT 114
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQ---NGDIRSPKRPCT 684
+E+ P PS +TSPG NG+I P +
Sbjct: 115 SEM--------PRPSF-----------------------QTSPGSRVTNGNI-----PHS 138
Query: 685 DYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAET-GI 743
S + + SP + QS + SP R + G ++ +
Sbjct: 139 STASEM-----YLSPTR-------------FSAAQQSPYRSPARLHCRSPGPHRRKSQSL 180
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
+F+ K+ KLA +R+ ++ + L +S ++ ++ + L R L NRH+DQ+I+C
Sbjct: 181 QLFYNKVCKLAYMRLQSLCKLLCVSAEMEHRIWTALEFCLLHRPELLKNRHLDQVIMCSV 240
Query: 804 YGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
Y + K+S + F+ I+ Y+ P V++ ++ S +++ II FYN+
Sbjct: 241 YAICKVSGCDTKFKSIVAAYKNLPTASQTVYKEAWI----------SGEEYDSIIGFYNR 290
Query: 864 IFVPAVKPLLVELG 877
+++ +K ++
Sbjct: 291 VYMQTLKNYILRFA 304
>gi|390457676|ref|XP_002742717.2| PREDICTED: retinoblastoma-associated protein [Callithrix jacchus]
Length = 1729
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 185/442 (41%), Gaps = 85/442 (19%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI-------IHVPVRFRNFNIHDSSR 251
+ W+ FL + DLV ++ +L I + P + I+ S R
Sbjct: 993 KVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPVLLKEPYKTAVIPINGSPR 1052
Query: 252 FVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENID 311
++ IA K +E +T I ++L C+ EC + ++N+
Sbjct: 1053 TPRRGQNRSARIA--------------KQLE-NDTRIIEVL----CKEHECNIDEVKNVY 1093
Query: 312 TDGLIYFENLMD--DSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGG 369
I F N + S+ + L K Y+ +LD R+F++ D +L + S+
Sbjct: 1094 FKNFIPFMNSLGLVTSNGLPEVESLSKRYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSF 1152
Query: 370 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKW 429
T K D + + SPH TPV T M T +
Sbjct: 1153 EAQRTPRKSNLDEEVNVI-------SPH--------------------TPVRTVMNTIQQ 1185
Query: 430 LRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR----AHIILEAIFPSSGLGERCV-TG 484
L ++ +PS L + +C + +++R +I E + +G+ CV G
Sbjct: 1186 LMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKF--AEAVGQGCVEIG 1243
Query: 485 SLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLAC 544
S QR ++LYYRV+E+M +E + L +N + LL + FH +LAC
Sbjct: 1244 S-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLAC 1290
Query: 545 SAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L RE+ +H
Sbjct: 1291 ALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKH 1350
Query: 596 LNSLEERLLESMVWEKGSSMYN 617
L E R++ES+ W S +++
Sbjct: 1351 LERCEHRIMESLAWHSDSPLFD 1372
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 29/194 (14%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 1446 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 1504
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 1505 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 1554
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKK 918
FYN +F+ +K +++ + + +S + H P SP FP+ SP +
Sbjct: 1555 VFYNSVFMQRLKTNILQYA----STRPPTLSPIPH-----IPRSP--YKFPS----SPLR 1599
Query: 919 VSATHNVYVSPLRT 932
+ N+Y+SPL++
Sbjct: 1600 IPGG-NIYISPLKS 1612
>gi|148679123|gb|EDL11070.1| retinoblastoma-like 2, isoform CRA_a [Mus musculus]
Length = 956
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 43/368 (11%)
Query: 262 LIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN 320
+I LCS++D + + I E I + +KK + E ENL
Sbjct: 93 VIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG----------- 138
Query: 321 LMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGS--LSGGAVNITGAK 377
++ + S + K Y+ G LDERVF+ ED + +G+ S LS + + +
Sbjct: 139 FLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCLSAASGTESAER 198
Query: 378 RKFDSL------ASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLR 431
+ + S + +PL+ G+ + VTPVSTA + L
Sbjct: 199 TQMRDILQQHLDKSKALRVCTPLT----------GVRYVQENSPCVTPVSTAAHSLSRLH 248
Query: 432 TVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANL 491
+++ L + PS +LE+ L+SC +D T + R + E + + +N
Sbjct: 249 SMLTGLRNAPSEKLEQILRSCSRDPTQAIADRLKEMYE-------IYSQHFQPDENFSNC 301
Query: 492 MDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLA 551
I + R + LYY+VLE++ E + L +L+ +L ++ FHR +LAC E+V
Sbjct: 302 AKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAF 360
Query: 552 THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 611
+HK FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+
Sbjct: 361 SHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKT 419
Query: 612 GSSMYNSL 619
S +++ +
Sbjct: 420 KSPLWDRI 427
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 86/303 (28%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 651 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 710
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV--------------------- 839
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV +
Sbjct: 711 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIKGKRRNSGSSESRSHQNSPTE 770
Query: 840 ---DWAS-------------------------ARQSGRS----EQDHVDIITFYNKIFVP 867
D AS R +G S E++ D+I FYN I+
Sbjct: 771 LNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYRK 830
Query: 868 AVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNV 925
++ AMK S+ N D +P +S +P + SP++V S +H +
Sbjct: 831 QIQAF---------AMK---YSQANAQTD-----TPPLSPYPFVRTGSPRRVQLSQSHPI 873
Query: 926 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLN 982
Y+SP +A+ S K +Y + SPSK L +IN + + + RG L
Sbjct: 874 YISP---HNNEAMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL- 922
Query: 983 FDD 985
DD
Sbjct: 923 LDD 925
>gi|426375441|ref|XP_004054547.1| PREDICTED: retinoblastoma-associated protein-like [Gorilla gorilla
gorilla]
Length = 645
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 156/348 (44%), Gaps = 63/348 (18%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYD 339
+ +T I ++L C+ EC + ++N+ I F N L+ + L N L K Y+
Sbjct: 345 ENDTRIIEVL----CKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYE 399
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 400 EIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH-- 449
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
TPV T M T + L ++ +PS L + +C +
Sbjct: 450 ------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKES 491
Query: 460 VMRRAH---IILEAIFPSSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 515
+++R I + F + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 492 ILKRVKDIGYIFKEKF-AKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESM 537
Query: 516 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLER 566
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 538 LKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNV 597
Query: 567 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 614
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W SS
Sbjct: 598 LNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSVSS 645
>gi|297694049|ref|XP_002824310.1| PREDICTED: retinoblastoma-associated protein, partial [Pongo
abelii]
Length = 438
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENL---MDDSSLSSS-----LNIL 334
+ +T I ++L C+ EC NID +YF+N M+ L +S + L
Sbjct: 141 ENDTRIIEVL----CKEHEC------NIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVESL 190
Query: 335 EKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPL 394
K Y+ +LD R+F++ D +L + S+ T K D + +
Sbjct: 191 SKRYEEIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNII------- 242
Query: 395 SPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDK 454
PH TPV T M T + L ++ +PS L + +C
Sbjct: 243 PPH--------------------TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTV 282
Query: 455 DVTTDVMRRAHIILEAIFP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYR 510
+ +++R I IF + +G+ CV GS QR ++LYYR
Sbjct: 283 NPKESILKRVKDI-GYIFKDKFAKAVGQGCVEIGS-------------QRYKLGVRLYYR 328
Query: 511 VLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFP 561
V+E+M +E + L +N + LL + FH +LAC+ E+V+AT+ T + FP
Sbjct: 329 VMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFP 388
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
+L + AFD KVIESFI+ E +L RE+ +HL E R++ES+ W
Sbjct: 389 WILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAW 436
>gi|47222555|emb|CAG02920.1| unnamed protein product [Tetraodon nigroviridis]
Length = 581
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 141/311 (45%), Gaps = 62/311 (19%)
Query: 334 LEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSP 393
L++ Y+ + D R+F++ D ++L V+++ +R ++ T+ P
Sbjct: 312 LDQQYEQHYLRSRDFDGRLFLDGDATVLAP------KVDLSQVERTPKKMSEEDNTLIPP 365
Query: 394 LSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCD 453
TP+ AMT+ + LR + +PS L + K+C
Sbjct: 366 -----------------------QTPIRAAMTSIQQLRGDLTSSGDQPSTHLATYFKNCT 402
Query: 454 KDVTTDVMRRAHIILEAIFPSSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
D T DVM+R + EA G +G CVT Q NL +KLYY++
Sbjct: 403 VDPTQDVMKRLETLGEAFSQRFGQAVGPHCVTLGRQRFNL------------GVKLYYKI 450
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT-------------- 557
+EAM +E + L +N + LL + FH +LAC+ E+V+AT+ +
Sbjct: 451 MEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVMATYGESSFKTGGYNQGSGDAA 510
Query: 558 ---MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSS 614
M FP +L+ + AFD KVIESFI+ + +L +++ +HL + E ++E + W S
Sbjct: 511 ERNMCFPWILDVVNLAAFDFYKVIESFIKADPTLSKDIVKHLETCENLIMERIAWRTVS- 569
Query: 615 MYNSLTVARPV 625
LT +P+
Sbjct: 570 -LCPLTTQQPL 579
>gi|148679124|gb|EDL11071.1| retinoblastoma-like 2, isoform CRA_b [Mus musculus]
Length = 913
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 170/368 (46%), Gaps = 43/368 (11%)
Query: 262 LIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN 320
+I LCS++D + + I E I + +KK + E ENL
Sbjct: 50 VIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLFEKKLLKGKE---ENLTG----------- 95
Query: 321 LMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGS--LSGGAVNITGAK 377
++ + S + K Y+ G LDERVF+ ED + +G+ S LS + + +
Sbjct: 96 FLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFLGEDAEEEVGTLSRCLSAASGTESAER 155
Query: 378 RKFDSL------ASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLR 431
+ + S + +PL+ G+ + VTPVSTA + L
Sbjct: 156 TQMRDILQQHLDKSKALRVCTPLT----------GVRYVQENSPCVTPVSTAAHSLSRLH 205
Query: 432 TVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANL 491
+++ L + PS +LE+ L+SC +D T + R + E + + +N
Sbjct: 206 SMLTGLRNAPSEKLEQILRSCSRDPTQAIADRLKEMYE-------IYSQHFQPDENFSNC 258
Query: 492 MDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLA 551
I + R + LYY+VLE++ E + L +L+ +L ++ FHR +LAC E+V
Sbjct: 259 AKEIANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEHDAFHRSLLACCLEVVAF 317
Query: 552 THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 611
+HK FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+
Sbjct: 318 SHKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKT 376
Query: 612 GSSMYNSL 619
S +++ +
Sbjct: 377 KSPLWDRI 384
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 86/303 (28%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ + +FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q T L +RH+DQ+++
Sbjct: 608 SSLALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSIIQCTELMMDRHLDQLLM 667
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV--------------------- 839
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV +
Sbjct: 668 CAIYVMAKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIKGKRRNSGSSESRSHQNSPTE 727
Query: 840 ---DWAS-------------------------ARQSGRS----EQDHVDIITFYNKIFVP 867
D AS R +G S E++ D+I FYN I+
Sbjct: 728 LNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYRK 787
Query: 868 AVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNV 925
++ AMK S+ N D +P +S +P + SP++V S +H +
Sbjct: 788 QIQAF---------AMK---YSQANAQTD-----TPPLSPYPFVRTGSPRRVQLSQSHPI 830
Query: 926 YVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLN 982
Y+SP +A+ S K +Y + SPSK L +IN + + + RG L
Sbjct: 831 YISP---HNNEAMPSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL- 879
Query: 983 FDD 985
DD
Sbjct: 880 LDD 882
>gi|312082219|ref|XP_003143354.1| hypothetical protein LOAG_07773 [Loa loa]
Length = 369
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 139/323 (43%), Gaps = 87/323 (26%)
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFS 653
+HLN +EER+LE W S ++ SL AD +PS A++
Sbjct: 3 KHLNKVEERVLEEFAWSLDSPLWPSLHRR--------------ADDVPSSQAVS------ 42
Query: 654 SGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSK 713
L V + S Q + SP +P R + + ++
Sbjct: 43 ---LETVEGYSMRQPSLSQRYTL-SPVKPLAAKRRLEFDDDD------------------ 80
Query: 714 PLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRE 773
S+ + R P G T + +FF K+ LAAVR+ + ER++L ++ R+
Sbjct: 81 -------SSCVAAKRRAPDGESLTPTSATL-LFFRKVYYLAAVRLRDLCERVRLDEKGRQ 132
Query: 774 SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQV 833
+ LF+ +L TSL RH+DQ ++CC Y VAKI Q N++F +I+Y+YR QPQ +V
Sbjct: 133 RAWTLFEHVLRTETSLMAGRHLDQNLMCCLYVVAKIGQQNISFHDIMYHYRHQPQAASRV 192
Query: 834 FRSVFV-----------DWASARQSG-------RSEQ-------------------DHVD 856
+R V V D AS G RSE +++D
Sbjct: 193 YRRVMVESNSSPPIILDDGASHDSVGSASDEKFRSESSVSGAVTGSGAATPEHQNVEYID 252
Query: 857 IITFYNKIFVPAVKPLLVELGPA 879
+I +YN+IF+ VK + +L P
Sbjct: 253 LIKYYNQIFISRVKSFVQKLQPG 275
>gi|22135753|gb|AAM91029.1| retinoblastoma susceptibility protein [Danio rerio]
Length = 314
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 94/379 (24%)
Query: 513 EAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTM-------------- 558
E+M +E + L +N + LL N FH +LAC+ E+V+AT+ ++
Sbjct: 1 ESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVVIATYVGSSLKNGGFGRSSGASDS 60
Query: 559 -----LFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 613
FP +L + AFD KVIESFI+ E +L ++ +HL E ++ES+ W S
Sbjct: 61 VESNLCFPWILSVFQLPAFDFYKVIESFIKAEPTLKHDMVKHLEQCEHVIMESLAWRADS 120
Query: 614 SMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQN 673
+++ L +R E A+P +L+ P+H H H
Sbjct: 121 PLFDLLKQSREEGPGE------QAEPPATLN-------------QPLH--HNHTA----- 154
Query: 674 GDIR-SPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPG 732
D+ SP RPC PP ++ A P P
Sbjct: 155 ADLYLSPVRPCRQ------------------------------PPVME---AEP----PT 177
Query: 733 GGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFF 791
G +++F+ K+ ++A +R+ + L S ++ ++ L Q L L
Sbjct: 178 PGTRAPRSNSLSLFYKKLYRMAYLRLKMLFSNLLTSHPEMEPIIWTLLQHTLQNEYELMR 237
Query: 792 NRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE 851
+RH+DQ+I+ Y + K+ ++L F+ I+ Y++ P + F+ V + E
Sbjct: 238 DRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNTNQETFKRVLI----------RE 287
Query: 852 QDHVDIITFYNKIFVPAVK 870
+ I FYN +F+ +K
Sbjct: 288 GQYDSINVFYNLVFMQKLK 306
>gi|388326925|pdb|4ELJ|A Chain A, Crystal Structure Of The Inactive Retinoblastoma Protein
Phosphorylated At T373
Length = 656
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 156/351 (44%), Gaps = 63/351 (17%)
Query: 283 KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN---LMDDSSLSSSLNILEKDYD 339
+ +T I ++L C+ EC + + N+ I F N L+ + L N L K Y+
Sbjct: 196 ENDTRIIEVL----CKEHECNIDEVANVAFKNFIPFMNSLGLVTSNGLPEVEN-LSKRYE 250
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRS 399
+LD R+F++ D +L + S+ T K D + + PH
Sbjct: 251 EIYLKNKDLDARLFLDHDKTL-QTDSIDSFETQRTPRKSNLDEEVNVI-------PPH-- 300
Query: 400 SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTD 459
PV T M T + L ++ +PS L + +C +
Sbjct: 301 ------------------XPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKES 342
Query: 460 VMRRAHIILEAIFP---SSGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAM 515
+++R I IF + +G+ CV GS QR ++LYYRV+E+M
Sbjct: 343 ILKRVKDI-GYIFKEKFAKAVGQGCVEIGS-------------QRYKLGVRLYYRVMESM 388
Query: 516 CTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT---------MLFPAVLER 566
+E + L +N + LL + FH +LAC+ E+V+AT+ T + FP +L
Sbjct: 389 LKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNV 448
Query: 567 TGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
+ AFD KVIESFI+ E +L RE+ +HL E R++ES+ W S +++
Sbjct: 449 LNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFD 499
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 514 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 572
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 573 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 622
Query: 859 TFYNKIFVPAVK 870
FYN +F+ +K
Sbjct: 623 VFYNSVFMQRLK 634
>gi|391340370|ref|XP_003744515.1| PREDICTED: retinoblastoma-like protein 1-like [Metaseiulus
occidentalis]
Length = 885
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 43/272 (15%)
Query: 725 SPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILN 784
SP P P +FF K+ LA+VR+ + L+++ + + + + +L
Sbjct: 623 SPEPPAPADA----VRGSWGLFFRKVYHLASVRLRHLCNGLRITDEHLTKAWTMLEHVLI 678
Query: 785 QRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA-S 843
T++ +RH+DQIIL C Y + K+ +LN F +I YR QP + QV+RSV + A
Sbjct: 679 NETTILKDRHLDQIILSCVYALCKLFKLNKKFSDITQCYRSQPNTQNQVYRSVLIQSAVE 738
Query: 844 ARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCP 900
A G E + DIITFYNKIFVP V P L ++ P P
Sbjct: 739 APADGNGEAQDEQRSDIITFYNKIFVPRVHPFLARF----------------RDDSAPNP 782
Query: 901 -GSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQS 959
SP + L P KV+ V+VSP K + +H++K++ QS
Sbjct: 783 LLSPLPRINSGLQSPKPLKVATDMKVFVSPY---KGNIPSTHNAKTF--------RIQQS 831
Query: 960 PSKDLTDIN-------HRLNSNRRVRGTLNFD 984
P+KDLT+IN +N+ R + L+ D
Sbjct: 832 PAKDLTEINRMVQRKSEEMNAVRASKRALDMD 863
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 146/625 (23%), Positives = 270/625 (43%), Gaps = 76/625 (12%)
Query: 20 DNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAF 79
D+ A + RL +C + L++D+ + + ++ F + + AN + G+ R W A
Sbjct: 7 DDQAVQERLKAVCAS-LNMDKQSSHDALEAF----NAIAANYTLEGDC------RHWLAC 55
Query: 80 VLYLVRRLSEKNGENLQQGSN--DNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSN 137
LY+ R E + SN N +L +L +L++++FF+++ ++ +
Sbjct: 56 SLYVACR--EGTMPTVASTSNLQGNCVSLRGLLSACELDLLEFFRKMEKW--------AA 105
Query: 138 IYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-----PSDANGDKQSAAASTSG 192
+ D RL +L+ +F +I+ + +++ E F S+ N ++ TS
Sbjct: 106 MTKLDMGRRL--TDLKDSFYVTTIMFSKFHQVFVELFTGFEQDQSNMNRARRYRRGPTS- 162
Query: 193 YISDYHRFGWLLFLALRIHAFSRFK-DLVTCTNGLVSILAILIIHVPVRFRN--FNIHD- 248
+SD +R WLL+++L+ + R V C + L+ L + + V R FN D
Sbjct: 163 -VSDIYRLCWLLYISLKSNEKIRINTGTVPCFHLLLCCLDFVYVSCVVAGRTDLFN-QDF 220
Query: 249 -SSRFVKKSNKGVDL--IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE 305
+ K GV+L I L S+ + + +L + N L++ E +
Sbjct: 221 YQEQLGKCEAAGVELKDIGILRSLCEKHKGEL----SEANVFRVHYLQRP---VKELIAM 273
Query: 306 NLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDD-SLLGSG 364
TD L D + ++ L++ ++ GELDE++F+ ED +G
Sbjct: 274 GTLKGSTDPLSLAIEFKD---VEVTIKSLKQSHEMTVLRGGELDEQIFLAEDACQKIGIE 330
Query: 365 SLSGGAVNITGAKRKFDSLASPVKT-----ITSPLSPHRSSASHPNGIAGGATSKMVVTP 419
+S + T + SL+ VK + +PL+ + GI ++P
Sbjct: 331 PVSQSEAHDTLCR----SLSEHVKKQRTIGLQTPLTGRGLLVNREPGIN--------LSP 378
Query: 420 VSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA--IFPSSGL 477
VSTA A L +++ PS L + L + R I E +F ++
Sbjct: 379 VSTATQGASKLHSLLAGRNHMPSESLSQMLAQI---IPNPAERIDQTIKEMGELFCTAYA 435
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL-LTNER 536
+ +L D +A++R L+Y +LE++ T E N SL L E+
Sbjct: 436 NREDDAEAPTNPDLFD--FAKKRLQLGEALFYTILESIITLEQNPQRTLNNFSLSLRQEQ 493
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
F + + A E+V+ ++ + LFP +L G+ + ++IE IR E L RE+ +H
Sbjct: 494 FQKSLFASCLEIVMYSYNSQETLFPWILNIFGLKGYHYYRIIEPMIRAEVRLSREVVKHF 553
Query: 597 NSLEERLLESMVWEKGSSMYNSLTV 621
N +EE++ ES+ W S ++ + V
Sbjct: 554 NKIEEQIFESIAWRSDSPVWEQVGV 578
>gi|355715600|gb|AES05379.1| retinoblastoma-like 1 [Mustela putorius furo]
Length = 493
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 51/334 (15%)
Query: 336 KDYDNATRNKGELDERVFINED-DSLLGS----------GSLSGGAVNITGAKRKFDSLA 384
K+Y+ G+ DER+F+ D + +G+ G L+ A ++ F+
Sbjct: 10 KEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGDTQLGKLTAQANVDCNLQQHFEK-- 67
Query: 385 SPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAE 444
KT +P +P G + V+TPV++A + L++++ L + PS +
Sbjct: 68 ---KTSFAPSTPL-------TGRRYLREKEAVITPVASATQSVSRLQSIVAGLKNAPSEQ 117
Query: 445 LERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNI---WAEQRR 501
L +SC ++ ++M+ G+GE Q + +A R
Sbjct: 118 LTNIFESCMRNPMENIMKIV----------KGIGETFCQHYTQSTDEQPGSHIDFAVNRL 167
Query: 502 LEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFP 561
A LYY++LE + E + LH +++ LL + FHR ++AC E+VL + + FP
Sbjct: 168 KLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSS-PRTFP 226
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
++E + F KVIE IR EE L R++ +HLNS+EE++LES+ W S+++ +L
Sbjct: 227 WIIEVLNLRPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQA 286
Query: 622 ARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
+ A+ +P+ + + NF +G
Sbjct: 287 S--------------ANKVPTCEEVIFPNNFETG 306
>gi|395505445|ref|XP_003757051.1| PREDICTED: retinoblastoma-like protein 1 [Sarcophilus harrisii]
Length = 1040
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 177/392 (45%), Gaps = 55/392 (14%)
Query: 243 NFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASE 301
+F+I D + S + +IA+LC ++D + + I E I+ + +K
Sbjct: 208 DFHISD----FRTSEEPPCIIATLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------ 257
Query: 302 CKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLL 361
++ + L+D S + + + K+Y+ G+ DERVF+ D
Sbjct: 258 -------------ILKGDCLLDISCFADNSKAVNKEYEEYVLTVGDFDERVFLGAD---- 300
Query: 362 GSGSLSGGAVNITGAKRKFDSLASPVKTIT---------SPLSPHRSSA-SHP-NGIAGG 410
A G+ +KF S K I + RS A S P G
Sbjct: 301 --------AEEEIGSPQKFTSDTPTGKLIARVHVEYNLQQHFAKKRSFAPSTPLTGRRYL 352
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ TPV++A + L+ ++ L + PS +L +SC ++ ++M I EA
Sbjct: 353 REKEAATTPVASATQSVSRLQNIVAGLKNAPSEQLVNIFESCVRNPMENIMNIVKSIGEA 412
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
+ Q + +D +A R A LYY++LE + E + LH +++
Sbjct: 413 F-----CQHYTQSTDEQPGSHID--FAVNRLKLAEILYYKILETIMVQETRRLHGMDMSV 465
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
LL + FHR ++AC E+VL + + FP ++E ++ F KVIE IR EE L R
Sbjct: 466 LLEQDIFHRSLMACCLEIVLFAYSSPRS-FPWIIEVLDLSPFYFYKVIEILIRSEEGLSR 524
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
+ +HLNS+EE++LES+ W S+++++L ++
Sbjct: 525 DTVKHLNSIEEQILESLAWSNDSALWDALLIS 556
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 49/256 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S +R ++ F+ L L +RH+DQ++LC
Sbjct: 762 LALFYRKVYHLASVRLRDLCLKLDISNDLRRKIWTCFEFTLVHCFDLMKDRHLDQLLLCA 821
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV----------------------D 840
FY +AK+++ TF++I+ +YR QPQ V+RSV + D
Sbjct: 822 FYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLKRIPKEVSTYDKNVKDNEMTECD 881
Query: 841 WASAR----QSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNND 896
A+ +G +++ D+I FYN+++V VK A+K + +E +
Sbjct: 882 LDCAKIPDSSTGTMKEERGDLIKFYNEVYVGRVKSF---------ALKYDLSNEDHVMEA 932
Query: 897 GPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P P + P +SP+++S H+VYVSP K A ++ + Y G
Sbjct: 933 LPLSPFPNIKQQP----VSPRRISQQHSVYVSP---HKNGACLTPRTALLYRFNG----- 980
Query: 957 YQSPSKDLTDINHRLN 972
SPSK L DIN+ +
Sbjct: 981 --SPSKSLKDINNMIK 994
>gi|31873726|emb|CAD97830.1| hypothetical protein [Homo sapiens]
Length = 849
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 35/311 (11%)
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL----------LGSGSLSGG 369
+L+ S ++N K Y+ + G LDER+F+ ED GSG+ +
Sbjct: 33 SLLSSCEYSKAIN---KAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCLNAGSGTETAE 89
Query: 370 AVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAK 428
V + ++ FD S I++PL+ G+ + VTPV TA +
Sbjct: 90 RVQMKNILQQHFDK--SKALRISTPLT----------GVRYIKENSPCVTPVPTATHSLS 137
Query: 429 WLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQG 488
L T++ L + PS +LE+ L++C +D T + R + E + +
Sbjct: 138 RLHTMLTGLRNAPSEKLEQILRTCSRDPTQAIANRLKEMFE-------IYSQHFQPDEDF 190
Query: 489 ANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAEL 548
+N I ++ R + LYY+VLE++ E + L +L+ +L + FHR +LAC E+
Sbjct: 191 SNCAKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEV 249
Query: 549 VLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMV 608
V ++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ +
Sbjct: 250 VTFSYKPPGN-FPFITEIFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLA 308
Query: 609 WEKGSSMYNSL 619
W+ S ++ +
Sbjct: 309 WKPESPLWEKI 319
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 61/287 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LAAVR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 544 SSLSLFFRKVYHLAAVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 603
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 604 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 663
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 664 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 723
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +
Sbjct: 724 IKQIKTFAMKYSQANMDAP-PLSP----YPFVRTGSPRRIQLSQNHPVYISP---HKNET 775
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
++S K +Y + SPSK L +IN + + + RG L
Sbjct: 776 MLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 815
>gi|390353367|ref|XP_792215.3| PREDICTED: retinoblastoma-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 527
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 143/303 (47%), Gaps = 24/303 (7%)
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGSLSGGAVNITGAKR 378
N++D ++ S+ + K+Y+ G+ DER+F+++D D +G+ S S A R
Sbjct: 126 NILDTNNFESNNKSICKNYEEYVLTIGDFDERIFLDKDADEEIGTPSKSAALRETEEAMR 185
Query: 379 KFDSLASPVKTITSPLSPHRS-SASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPL 437
K + +PL+ R P +TPVSTA L+ ++
Sbjct: 186 KPTGQKTKDLCPPTPLTNRRYLKEKDPE-----------ITPVSTATQAVSKLQALLTGR 234
Query: 438 PSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWA 497
+ S LE K C ++ + R + E IF T +L N
Sbjct: 235 KVEASELLEGIFKDCSENPAEGIASRVKEMGE-IFCQK------YTQALDEGNAGSPQDF 287
Query: 498 EQRRLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
+RRL+ A LYY+VLE + AE + L KNLT LL +E FHR + AC E+V+ + +
Sbjct: 288 AKRRLKLAENLYYKVLENIMLAEKRRL--KNLTHLLEHELFHRSLFACCLEVVIFAYNS- 344
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP +LE I AF KVIE +R EE L R++ +HLN +EE +L+ W S ++
Sbjct: 345 QRTFPWILEAFEIPAFHFYKVIELILRAEEGLSRDIVKHLNFIEEAILQDYAWRSDSPLW 404
Query: 617 NSL 619
+ L
Sbjct: 405 DLL 407
>gi|320165630|gb|EFW42529.1| retinoblastoma-associated protein B [Capsaspora owczarzaki ATCC
30864]
Length = 1138
Score = 112 bits (281), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 192/424 (45%), Gaps = 51/424 (12%)
Query: 496 WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT 555
W+ R L+ LKL ++ + E V +T ++T E FH +LAC E+ +
Sbjct: 609 WSATRYLQCLKL---IVSSERKREG-VKFPDFVTYVMTKESFHLSLLACCIEISIKFGGP 664
Query: 556 V-TMLFPAVLERTGITAFDLSKVIESFIRHEES--LPRELRRHLNSLEERLLESMVWEKG 612
T+LFP VL I A+D KVIE +R + L RE+ +HL +EER+++++ W+ G
Sbjct: 665 AETLLFPWVLTVFDIHAYDFFKVIEPVVRVCDGVFLGREVVKHLGRIEERIVDTLAWKTG 724
Query: 613 SSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQ 672
S + ++ A+ + E + AD PS+ A A + F G +PV S+ TS +
Sbjct: 725 SPLLEAVRAAQGMPHPE----AVQAD--PSIAAAAGPLAF---GATPVKSVVVDLTSSPR 775
Query: 673 NG----------------------DIRSPK--RPCTDYRSVLVERNNFTSPVKDRLLGLN 708
G +P+ R + Y++ F SP + +
Sbjct: 776 TGMATRSSSGSTTNASAAAAAAASIAATPRTERARSTYQAATPIMAVFESPRRSGVAAQA 835
Query: 709 NLKSKPLPPPLQSAFA-SPTRPNPGGGGETCAET-------GINIFFCKINKLAAVRINA 760
+ P L ++ A +P P GG T +++F K+ L +R++
Sbjct: 836 KFGTPTRPSTLAASSAMTPNHPTTNGGTFAAPSTPSRAKHSALHLFVRKVYALGYMRVSD 895
Query: 761 MVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLT-FREI 819
+ E+L L+ + + V+ + + + L +R +D +++C + +AK+ Q T F+ +
Sbjct: 896 LCEKLHLTAESKTRVWTVLTEAIQMEPLLLRDRTLDLLVICSAFIIAKVGQDKTTSFKTL 955
Query: 820 IYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPA 879
+ Y++QP + + V + A SG S I+ FYN+IF+P ++P P
Sbjct: 956 LDFYKQQPNYQRSSYEGVLLTRADP-VSG-SHDTRGSIVKFYNEIFMPQLRPFASRFVPN 1013
Query: 880 GTAM 883
GT +
Sbjct: 1014 GTEI 1017
>gi|149032674|gb|EDL87544.1| retinoblastoma-like 2, isoform CRA_c [Rattus norvegicus]
Length = 951
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 262 LIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN 320
+I LCS++D + + I + I + +KK E ENL
Sbjct: 88 VIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKLLRGKE---ENLTG----------- 133
Query: 321 LMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGSLSGGAVNITGAKRK 379
++ + + S + K Y+ G LDER+F+ ED + +G+ S A + T + +
Sbjct: 134 FLEPGNFAESFKAVNKAYEEYVLATGSLDERIFLGEDAEEEVGTLSRCVSAASGTESAER 193
Query: 380 F---DSLA-----SPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLR 431
D L S + +PL+ G+ + VTPVSTA + L
Sbjct: 194 TQMRDILQQHLDKSKTLRVCNPLT----------GVRYVQENSPCVTPVSTATHSLNRLH 243
Query: 432 TVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANL 491
T++ L + PS +LE+ L+SC +D T + R + E I+ + V+ N
Sbjct: 244 TMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-IYSQHFQPDENVS------NC 296
Query: 492 MDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLA 551
+ + R + LYY+VLE++ E + L +L+ +L + FH+ +LAC E+V
Sbjct: 297 AKEMANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLACCLEVVAF 355
Query: 552 THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 611
++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+
Sbjct: 356 SYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKT 414
Query: 612 GSSMYNSL 619
S +++ +
Sbjct: 415 KSPLWDRI 422
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 88/304 (28%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 646 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 705
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG----RSEQD--- 853
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG RS Q+
Sbjct: 706 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 764
Query: 854 ---------------------------------------HVDI--------ITFYNKIFV 866
+ DI I FYN I+
Sbjct: 765 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGANSDIEEEERGDLIQFYNNIYR 824
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHN 924
++ ++ A + M T P +S +P + SP++V S +H
Sbjct: 825 KQIQTFAMKYSQANSQMDT-----------------PPLSPYPFVRTGSPRRVQLSQSHP 867
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y+SP K +A++S K +Y + SPSK L +IN + + + RG L
Sbjct: 868 IYISP---HKNEAMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 917
Query: 982 NFDD 985
DD
Sbjct: 918 -LDD 920
>gi|412985248|emb|CCO20273.1| predicted protein [Bathycoccus prasinos]
Length = 1368
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 87/142 (61%), Gaps = 7/142 (4%)
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQI 798
A+ +++FF K+ +LAAVR+ + RL ++Q++ + + + ++ ++TSL +NRH+DQI
Sbjct: 1062 AKASLDVFFAKVLRLAAVRLADICARLHVNQEVTRRAFQICEFVVFEKTSLLYNRHLDQI 1121
Query: 799 ILCCFYGVAKIS----QLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDH 854
IL YG KI+ N+ F++I+Y Y KQPQC +VF S + + G
Sbjct: 1122 ILASIYGACKIASSEQDRNVKFKDIVYRYHKQPQCVEEVFWSCPL---TVTNPGLEVVSR 1178
Query: 855 VDIITFYNKIFVPAVKPLLVEL 876
DII FYNK FVP V+P +++L
Sbjct: 1179 GDIIAFYNKQFVPNVRPFMLQL 1200
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKG 612
++ +T+ FPA+ G+ AFD+ IE F+R +PRE+R + +EE +LE + W+K
Sbjct: 764 NRAITLRFPAIPNAIGLNAFDVLNGIEPFVRSRPEMPREIRAYFGRIEESMLEKLSWKKD 823
Query: 613 SSMYNSLTVARPVLSAEINRLG 634
SS+Y L VA A+ +G
Sbjct: 824 SSLYPLLRVATTKSGAKKKNIG 845
>gi|149032673|gb|EDL87543.1| retinoblastoma-like 2, isoform CRA_b [Rattus norvegicus]
Length = 908
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 262 LIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKSENLENIDTDGLIYFEN 320
+I LCS++D + + I + I + +KK E ENL
Sbjct: 45 VIEKLCSLHDGLVLEAKGIKQHFWKPYIRKLFEKKLLRGKE---ENLTG----------- 90
Query: 321 LMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGSLSGGAVNITGAKRK 379
++ + + S + K Y+ G LDER+F+ ED + +G+ S A + T + +
Sbjct: 91 FLEPGNFAESFKAVNKAYEEYVLATGSLDERIFLGEDAEEEVGTLSRCVSAASGTESAER 150
Query: 380 F---DSLA-----SPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLR 431
D L S + +PL+ G+ + VTPVSTA + L
Sbjct: 151 TQMRDILQQHLDKSKTLRVCNPLT----------GVRYVQENSPCVTPVSTATHSLNRLH 200
Query: 432 TVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANL 491
T++ L + PS +LE+ L+SC +D T + R + E I+ + V+ N
Sbjct: 201 TMLAGLRNAPSEKLEQILRSCSRDPTRAIADRLREMYE-IYSQHFQPDENVS------NC 253
Query: 492 MDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLA 551
+ + R + LYY+VLE++ E + L +L+ +L + FH+ +LAC E+V
Sbjct: 254 AKEMANKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLSGVLEQDAFHKSLLACCLEVVAF 312
Query: 552 THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEK 611
++K FP + E + + KVIE FIR E+ L RE+ +HLN +EE++L+ + W+
Sbjct: 313 SYKPPGN-FPFIAEIFDVPHYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKT 371
Query: 612 GSSMYNSL 619
S +++ +
Sbjct: 372 KSPLWDRI 379
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 88/304 (28%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 603 SSLSLFFRKVYYLAGVRLRDLCTKLDISDELRKKIWTCFEFSIVQCPELMMDRHLDQLLM 662
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG----RSEQD--- 853
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R SG RS Q+
Sbjct: 663 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIK-GKRRNSGSCENRSHQNSPT 721
Query: 854 ---------------------------------------HVDI--------ITFYNKIFV 866
+ DI I FYN I+
Sbjct: 722 ELNTDRASRDSSPVMRSNSTLPVPQPSSAPPTPTRLTGANSDIEEEERGDLIQFYNNIYR 781
Query: 867 PAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHN 924
++ ++ A + M T P +S +P + SP++V S +H
Sbjct: 782 KQIQTFAMKYSQANSQMDT-----------------PPLSPYPFVRTGSPRRVQLSQSHP 824
Query: 925 VYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+Y+SP K +A++S K +Y + SPSK L +IN + + + RG L
Sbjct: 825 IYISP---HKNEAMLSPREKIFY-------YFSNSPSKRLREINSMIRTGETPTKKRGIL 874
Query: 982 NFDD 985
DD
Sbjct: 875 -LDD 877
>gi|4139826|pdb|1GUX|A Chain A, Rb Pocket Bound To E7 Lxcxe Motif
gi|29726891|pdb|1O9K|A Chain A, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726893|pdb|1O9K|C Chain C, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726895|pdb|1O9K|E Chain E, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726897|pdb|1O9K|G Chain G, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
Length = 218
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 27/213 (12%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---S 474
TPV T M T + L ++ +PS L + +C + +++R I IF +
Sbjct: 2 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFA 60
Query: 475 SGLGERCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLT 533
+G+ CV GS QR ++LYYRV+E+M +E + L +N + LL
Sbjct: 61 KAVGQGCVEIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLN 107
Query: 534 NERFHRCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRH 584
+ FH +LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+
Sbjct: 108 DNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKA 167
Query: 585 EESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
E +L RE+ +HL E R++ES+ W S +++
Sbjct: 168 EGNLTREMIKHLERCEHRIMESLAWLSDSPLFD 200
>gi|297259874|ref|XP_002798195.1| PREDICTED: retinoblastoma-like protein 1-like [Macaca mulatta]
Length = 1031
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 149/659 (22%), Positives = 269/659 (40%), Gaps = 137/659 (20%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SIIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAASTSGYISDYHR 199
R+E L+ NF +++ K Y+ I+ + F P KQ + + D
Sbjct: 121 RIE--RLERNFEVSTVIFKKYEPIFLDIFQNPYEEPPKLLRSRKQRRIPCS---VKDLFN 175
Query: 200 FGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDS 249
F W LF+ + + DLV + L+ L ++ I P R F+
Sbjct: 176 FCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFH 235
Query: 250 SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLE 308
+ + S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 TADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK------------- 282
Query: 309 NIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D
Sbjct: 283 ------ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD----------- 325
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMV 416
A G RKF +P+ +T+ + + H A S + V
Sbjct: 326 -AEEEIGTPRKFTG-DTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAV 383
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPV++A + L++++ L + PS +L +SC ++ ++M+ IL+ G
Sbjct: 384 ITPVASATQSVSRLQSIVAGLKNAPSDQLTNIFESCVRNPMENIMK----ILK------G 433
Query: 477 LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER 536
+GE Q + EQ + + + E +
Sbjct: 434 MGETFCQHYTQSTD-------EQ---PGSHIGKKRKLKLVLLEQDI-------------- 469
Query: 537 FHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHL 596
FH ++AC E+VL + + FP ++E + F KVIE IR EE L R++ ++L
Sbjct: 470 FHHSLMACCLEIVLFAYSS-PRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGLSRDMVKYL 528
Query: 597 NSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSG 655
NS+EE++LES+ W S+++ +L V+ A+ +P+ + + NF +G
Sbjct: 529 NSIEEQILESLAWSHDSALWEALQVS--------------ANKVPTCEEVIFPNNFETG 573
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 48/256 (18%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L +S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 760 LALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 819
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWAS----ARQ------------ 846
FY +AK+++ TF+EI+ +YR QPQ V RS+ V + AR+
Sbjct: 820 FYIMAKVTKEERTFQEIMKSYRNQPQANSHV-RSIMVSSLALEIVARKRGSCYLEDATKT 878
Query: 847 ----SGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGS 902
SG +++ D+I FYN I+V VK A+K + +S +H D P P S
Sbjct: 879 PDSSSGPVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHVMDAP-PLS 927
Query: 903 PKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSP 960
P FP + SP+++S H++Y+SP K + ++ S Y G SP
Sbjct: 928 P----FPHIKQQPGSPRRISQQHSIYISP---HKNGSGLTPRSTLLYKFNG-------SP 973
Query: 961 SKDLTDINHRLNSNRR 976
SK L +IN+ + +
Sbjct: 974 SKSLKEINNMIRQGEQ 989
>gi|46812636|gb|AAH69179.1| Rbl1 protein, partial [Mus musculus]
Length = 682
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 14/207 (6%)
Query: 416 VVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
V TPV++A + L++++ L S PS +L +SC ++ ++++
Sbjct: 2 VTTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCMRNPMGNIIKIV----------K 51
Query: 476 GLGERCVTGSLQGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL 532
G+GE Q + +A R A LYY++LE + E + LH +++ LL
Sbjct: 52 GIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLL 111
Query: 533 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
+ FH+ ++AC E+VL + + FP ++E + F KVIE IR EE L R++
Sbjct: 112 EQDIFHKSLMACCLEIVLFAYSS-PRTFPWIIEVLDLQPFYFYKVIEVVIRSEEGLSRDM 170
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSL 619
+HLNS+EE++LES+ W S+++ +L
Sbjct: 171 VKHLNSIEEQILESLAWTNNSALWEAL 197
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 51/260 (19%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +F+ K+ LA+VR+ + +L S ++R ++ F+ L L +RH+DQ++LC
Sbjct: 406 LALFYRKVYHLASVRLRDLCLKLDFSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCA 465
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF---------------------VDW 841
FY +AK+++ TF+EI+ +YR QPQ V+RSV ++
Sbjct: 466 FYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGGVVVYNGDCEMTDGDIED 525
Query: 842 ASARQSGRSE---QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
A+ + SE ++ D+I FYN ++V VK A+K + +S +H D P
Sbjct: 526 ATKTPNCSSEPVKEERGDLIKFYNTVYVGRVKSF---------ALKYD-LSNQDHIMDAP 575
Query: 899 CPGSPKVSVFPALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHA 956
P SP FP + SP+++S H++YVSP K A ++ S Y G
Sbjct: 576 -PLSP----FPHIKQQPGSPRRISQQHSLYVSP---HKNGAGLTPRSALLYKFNG----- 622
Query: 957 YQSPSKDLTDINHRLNSNRR 976
SPSK L DIN+ + +
Sbjct: 623 --SPSKSLKDINNMIRQGEQ 640
>gi|328865754|gb|EGG14140.1| Rb-like protein [Dictyostelium fasciculatum]
Length = 1054
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/522 (20%), Positives = 232/522 (44%), Gaps = 54/522 (10%)
Query: 102 NEFNLCHILRVMKLNIVDFFK-ELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLS 160
N L +L++ + + +FF+ LP+F+ G G E + K L+ +FV ++
Sbjct: 113 NSVYLSQLLKLTNIKLKEFFEVPLPRFIAWMG------LGKAVEEQF--KNLEQSFVIMN 164
Query: 161 ILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAF-SRFKDL 219
IL + Y+ +Y F D+ K+ A GW ++L + F ++ DL
Sbjct: 165 ILYRKYEELYSLLF-HFDSKEPKELLA------------IGWFIYLYCKSRLFVNQVPDL 211
Query: 220 VTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRK 279
+ N L+ L + IH P F+ S+ + N + L + +++
Sbjct: 212 MKSINLLLCSLDFIYIHSPDSFKR-----STTMLPIENDSI-----LPFLTKKVGSNIKD 261
Query: 280 IMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYD 339
+ EKT ++ +++KK S + + + E+ + + L ++ N L K+Y+
Sbjct: 262 LDEKTFSIYIEMMKK-----SNILKYTNNMNNMNNNNHNESFFNSTLLMTNYNNLNKNYE 316
Query: 340 NATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKF-DSLASPVKTITSPLSPHR 398
+ G++DER+F+ + + + + +I+ KF D + + + + ++
Sbjct: 317 QQYYSSGDIDERMFLFDKEIIGTPFKANHHFTSISTPTSKFRDYNNNNINNTNNTNNNNQ 376
Query: 399 SSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTT 458
H + TP+S++++ +W++ I ++PS +L+ +K C ++
Sbjct: 377 YGGGHLTPVKQQMKLNPPQTPISSSLSMIEWIKKSIQNYQAEPSQDLKDLVKDCGEENVQ 436
Query: 459 DVMRRA--HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMC 516
+ A + L F S +G +G ++ N +R + +KLYY +LE +
Sbjct: 437 FIQTMACDALNLAQPFLSQQVGS---SGGIEKEN--------KRSIYGIKLYYYLLEKIL 485
Query: 517 TAEAQVLHAKNLT--SLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 574
E + + + T + + + FH+ +L E+V +K V++ FP ++ + F
Sbjct: 486 NIEKARIGSNSPTFKNFIMHGEFHKSLLITCFEIVAHAYKLVSVEFPFFVKLFNVHPFSY 545
Query: 575 SKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
++I++ I+ + + P L H + ++++++E W GS ++
Sbjct: 546 CRIIDNIIKIDGAFPTNLINHFSKIDDQIIEKYAWSTGSPIF 587
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 696 FTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAA 755
F++PVK+ NN +KPL +SP++ N + KI + +
Sbjct: 619 FSTPVKNNNNNNNNNNNKPLM--TNQVLSSPSKNNQPNNNNNNPSKLFITIYKKIQQYLS 676
Query: 756 VRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLT 815
+ L L +++ + + I+ + TSL NR ++ I++C Y + K++Q ++
Sbjct: 677 TKCKKFCSILNLPKEMIQHIITASMAIVTELTSLLNNRTLEIIVICSIYALCKLNQHTIS 736
Query: 816 FREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLL 873
F+ II N PQV+ ++ + DI+ FYNKIF+P P++
Sbjct: 737 FKNIIEN-----TGTPQVYY---------KEVILTNNTPGDIVAFYNKIFLPLADPII 780
>gi|291236043|ref|XP_002737957.1| PREDICTED: retinoblastoma-like protein 1-like, partial
[Saccoglossus kowalevskii]
Length = 855
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 30/313 (9%)
Query: 318 FENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGSLSGGAVNITG- 375
+ L+D ++ + + K+Y+ +G+ DER+F+ D D +G+ + S V +TG
Sbjct: 62 YSGLLDVNNFEVNNKSINKEYEEYVLTRGDFDERIFLGADADEEIGTPAKST-VVTVTGN 120
Query: 376 ------AKRKFDSLASPVKTI--TSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTA 427
KR K++ ++PL+ R VTPVSTA
Sbjct: 121 LSEKMQVKRNLQQHFDKTKSLAPSTPLTNRRYLKE----------KDPTVTPVSTATQGV 170
Query: 428 KWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQ 487
L+ ++ + PS L + C ++ V +R + E GS
Sbjct: 171 SRLQALLAGHKTGPSDLLVTLFRDCSENPLDTVCKRIKELGEIFCEKYAQPSEDHPGSH- 229
Query: 488 GANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAK-NLTSLLTNERFHRCMLACSA 546
+D +A++R A LY++ LE + AE + L AK +LTSLL+++ FH+ + AC
Sbjct: 230 ----ID--FAKRRFCMAESLYFKALENIMQAEKKRLGAKFDLTSLLSHDVFHKSLFACCQ 283
Query: 547 ELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 606
E+V+ ++ + FP V++ + + KVIE IR E+ L R++ +HLN +EE++LES
Sbjct: 284 EVVIFSYNS-QRTFPWVIDIYHLAPYHFYKVIELLIRAEDGLSRDVVKHLNHIEEQILES 342
Query: 607 MVWEKGSSMYNSL 619
+ W+ S ++ ++
Sbjct: 343 LAWKYDSPLWEAM 355
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ +FF K+ LA VR+ + RL++ +R ++ F+ L L +RH+DQ+++C
Sbjct: 538 LGLFFRKVYHLANVRLLELCNRLEIVDDLRRKIWTCFEHSLVHSVDLMMDRHLDQLLMCA 597
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
Y + K++ + TF+EI+ YR QPQ V+RSV +
Sbjct: 598 VYVICKVTAQDRTFQEIMKCYRLQPQAASHVYRSVLL 634
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 25/131 (19%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
++D D+I FYN IFV ++ + R S N +G +P +S P
Sbjct: 704 DEDRGDLIKFYNSIFVRKIQ------------LFAMRFSAQNGAAEGGL-EAPPLSPLPL 750
Query: 911 LPD--MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+ +SP++VS+ H VY+SP + S +S SS+ Y C +SPSK+L DIN
Sbjct: 751 VKSHPVSPRRVSSQHQVYISPRKNS---TPLSPSSRMMY-CFN------RSPSKNLRDIN 800
Query: 969 HRLNSNRRVRG 979
+ + S R G
Sbjct: 801 NMIKSGERPIG 811
>gi|66803613|ref|XP_635645.1| Rb-like protein [Dictyostelium discoideum AX4]
gi|60463973|gb|EAL62136.1| Rb-like protein [Dictyostelium discoideum AX4]
gi|62821759|dbj|BAD95800.1| retinoblastoma-like protein [Dictyostelium discoideum]
Length = 1312
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 205/507 (40%), Gaps = 113/507 (22%)
Query: 408 AGGATSKMVVTPVSTAMTTAKWLRTVICPLPS-KPSAELERFLKSCDK-----DVTTDVM 461
AG S + TP+S +T WL+ I PS L LKS D+ +V +
Sbjct: 618 AGNLGSVIPQTPISLTLTLESWLKVEIQNYRDPNPSLNLINILKSADQPQQTSEVDKMIE 677
Query: 462 RRAHII--LEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE 519
R + + +++F G+ + Q ++R+ A++LYY +LE + E
Sbjct: 678 RVSSLTNNTDSLFSIGGIDDHQQQQQQQQE------VKQRRKNMAIQLYYCLLEKLIKFE 731
Query: 520 AQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 579
+ N+ LL +E FH+ +L+ S E++ +K + FP + + F ++I+
Sbjct: 732 QNT--SSNINVLLNHEDFHKSLLSNSFEIIAYVYKMEGLYFPHFINVFKLHPFSYLRLID 789
Query: 580 SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADP 639
++ + LP+ L +H + +EE++LE VW S++++ T+ N G+ A
Sbjct: 790 LVLKVDADLPKLLAQHFSQIEEKILEKYVWSNNSTVFS--TIKSHDFQNIFNSNGVGA-- 845
Query: 640 MPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSP 699
AI TH+ RP + + +NN +P
Sbjct: 846 -----AITTHL------------------------------RPTQVFSTPTKNQNN--NP 868
Query: 700 VKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRIN 759
+++ L N+ + +PT+ NP I F K++ L +
Sbjct: 869 FRNQQLINTNIPN------------TPTKKNP----------FIQNFIKKVSTLIIAKCR 906
Query: 760 AMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREI 819
++ + LS +Y + +IL T LF NR ID +++C Y + K++ N+TF+ I
Sbjct: 907 KLIHAMGLSSDYVVQIYQVMIKILIDETLLFKNREIDVLLICSIYAICKVNSKNITFKAI 966
Query: 820 IYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV------------------------ 855
I + +V++ V++ + + ++
Sbjct: 967 I----DKSCISAKVYKEVYIGNDENNNNNNNNNNNNNNNNNNNNNNINNNNNNNENNNNN 1022
Query: 856 ------DIITFYNKIFVPAVKPLLVEL 876
DII FYNKIF+ + P + E+
Sbjct: 1023 NNPVKGDIILFYNKIFLTKMDPYIHEV 1049
>gi|390462299|ref|XP_002747257.2| PREDICTED: retinoblastoma-like protein 1 [Callithrix jacchus]
Length = 1131
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 55/284 (19%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYC 777
P Q+ +P G + + +F+ K+ LA+VR+ + +L +S ++R ++
Sbjct: 826 PKQTNLTKAQEVHPTGISKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWT 885
Query: 778 LFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSV 837
F+ L L +RH+DQ++LC FY +AK+++ TF+EI+ +YR QPQ V+RSV
Sbjct: 886 CFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSV 945
Query: 838 FV-----------------------DWASARQS-----GRSEQDHVDIITFYNKIFVPAV 869
+ D A ++ G +++ D+I FYN I+V V
Sbjct: 946 LLKSIPREVVAYNKNINDDFEMIDCDLEDAAKTPDCSNGSVKEERGDLIKFYNTIYVGRV 1005
Query: 870 KPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDM--SPKKVSATHNVYV 927
K A+K + +S +H D P P SP FP + SP+++S H++YV
Sbjct: 1006 KSF---------ALKYD-LSNQDHVMDVP-PLSP----FPHIKQQPGSPRRISQQHSIYV 1050
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRL 971
SP K + ++ S Y G SPSK L DIN+ +
Sbjct: 1051 SP---HKNGSGLTPRSALLYKFNG-------SPSKSLKDINNMI 1084
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 139/597 (23%), Positives = 256/597 (42%), Gaps = 85/597 (14%)
Query: 28 LTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRRL 87
L LC+ L++DE + E + F + GN E W A LY+ R
Sbjct: 21 LQALCQE-LNLDEGSAAEALDDFTAIR----------GNYSLEGEVTHWLACSLYVACRK 69
Query: 88 S--EKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S G+ + +G N +L ILR KL+++ FF ++ +++ +SN+ ++
Sbjct: 70 SVIPTVGKGIMEG---NCVSLTRILRSAKLSLIQFFSKMKKWMD-----MSNL-PQEFRE 120
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFL-----PSDANGDKQSAAASTSGYISDYHRF 200
R+E L+ NF +++ K ++ I+ + F P KQ + + D F
Sbjct: 121 RIE--RLERNFEVSTVIFKKFQPIFLDIFQNPYEKPPKLRSRKQRRIPCS---VKDLFNF 175
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR-------FRNFNIHDSS 250
W LF+ + + DLV + L+ L ++ I P R F+ S
Sbjct: 176 CWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHS 235
Query: 251 RFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSENLEN 309
+ S + +IA LC ++D + + I E I+ + +K
Sbjct: 236 ADFRASEEPPCIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRK-------------- 281
Query: 310 IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLGSGSLSG 368
++ E L+D SS + + + K+Y+ G+ DER+F+ D + +G+
Sbjct: 282 -----ILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFT 336
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSA-SHP-NGIAGGATSKMVVTPVSTAMTT 426
G ++ K + A+ + RS A S P G + ++TPV++A +
Sbjct: 337 GDTSLG----KMAAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEALITPVASATQS 392
Query: 427 AKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSL 486
L++++ L + PS +L +SC ++ ++M+ IL+ G+GE
Sbjct: 393 VSRLQSIVAGLKNAPSEQLLNIFESCVRNPMENIMK----ILK------GIGETFCQHYT 442
Query: 487 QGANLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLA 543
Q + +A R A LYY++LE + E + LH +++ LL + FHR ++A
Sbjct: 443 QSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGMDMSVLLEQDIFHRSLMA 502
Query: 544 CSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
C E+VL + + FP ++E + F KV + ++ EE + E++ LN ++
Sbjct: 503 CCLEIVLFAYSS-PRTFPWIIEILNLQPFYFYKVSQ-IVQAEEGI-SEVKVQLNEIK 556
>gi|290981592|ref|XP_002673514.1| retinoblastoma protein [Naegleria gruberi]
gi|284087098|gb|EFC40770.1| retinoblastoma protein [Naegleria gruberi]
Length = 733
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 185/435 (42%), Gaps = 82/435 (18%)
Query: 196 DYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKK 255
D + GW++ + L H S D N L+ NF I S +
Sbjct: 47 DNFKAGWIILVLLARHLPSSLLDFTESVNLLI---------------NFMI--SMWKASQ 89
Query: 256 SNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGL 315
+++ + I L SI + S+D K+ + + I L K E S+ + NID
Sbjct: 90 NSRLSETIEELFSICNISKD---KLDSRYDEYIRTTLSKLTIEN---LSDFVNNID---- 139
Query: 316 IYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITG 375
SLS + +KD D + G DER+F+ +D +N+ G
Sbjct: 140 ----------SLSKLNMLFDKDEDLTLGSLG-FDERIFLYRND------------INLIG 176
Query: 376 AKRKFDSLASPVKTITSPL-----SPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWL 430
K S +PV + P P RS P ATS+ TP+ ++ + +
Sbjct: 177 DISKISS--APVYQLNPPKPTQHNDPFRSPLRSPGHFT--ATSQ---TPLQASLLVIQLI 229
Query: 431 RTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI-FPSSGLGERCVTGSLQGA 489
L S P L + KSC+ D T+ + R +++ + F S L +
Sbjct: 230 EESTKGLSSSPDETLLGYFKSCNIDQTSTIENRLKSLVDKVNFESLLLFNK--------- 280
Query: 490 NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAK-NLTSLLTNERFHRCMLACSAEL 548
E+R+ E +K+YY L+ M E + L N ++LLTNE FHR + CS E
Sbjct: 281 --------EKRKQEIMKIYYGTLKHMLQGEEKRLSGTANFSTLLTNENFHRSLTICSIEC 332
Query: 549 V-LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESM 607
V A + T+ +L + F+LS V+ESF+++ L L+R S+EE LL+S+
Sbjct: 333 VSFAYNSKDTIDLQVLLNEFVLEPFELSIVLESFVQNATWLNSALKRQFKSIEEVLLDSL 392
Query: 608 VWEKGSSMYNSLTVA 622
W+K S +Y+ L+ +
Sbjct: 393 AWKKNSVLYSKLSTS 407
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 60/279 (21%)
Query: 745 IFFCKINKLAAVRINAMVERLQLSQQ------------IRESVYCLFQQILNQRTSLFFN 792
FF K+ KL + RI + +QQ + E V+ +LN+ L +
Sbjct: 454 FFFRKMYKLVSRRIQELCYHFNQTQQSNSEEPMIISMDLMEEVWHTVYYVLNEARGLMVS 513
Query: 793 RHIDQIILCCFYGVA-KISQLNLTFREIIYNYR--------KQPQCKPQVFRSVFVDWAS 843
RH+D II+C Y + K++++ ++F++IIYNYR P ++ V +D
Sbjct: 514 RHVDHIIMCSMYAICNKVNRMRISFKDIIYNYRIICENIRMISPVEIGKILWQVPLD--- 570
Query: 844 ARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSP 903
E D DI+ FYN +++P+VK +++ +G A+ P P
Sbjct: 571 ------KEGDLGDIVKFYNLVYIPSVKGFILD-KTSGAALDR--------------PEMP 609
Query: 904 KVSVFPAL---PD--MSPKKVSATHNVYVSPLR---TSKMDALISHSSKSYYACVGESTH 955
V +F P+ +SP+K + + N +SP+R L++ +K+ Y ST
Sbjct: 610 YVEIFTKTKIAPNFVLSPRKSNYSKNSLLSPMRHQDNYHTTLLLTPRTKALYEFGTNSTK 669
Query: 956 AY-----QSPSKDLTD--INHRLNSNRRVRGTLNFDDVD 987
+ +P+++ T IN+ S R V+ TL+F D
Sbjct: 670 KHFDQISTTPNRESTSSVINNSDISKRGVKRTLDFGGDD 708
>gi|443696074|gb|ELT96854.1| hypothetical protein CAPTEDRAFT_120947 [Capitella teleta]
Length = 754
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 144/637 (22%), Positives = 271/637 (42%), Gaps = 104/637 (16%)
Query: 15 ESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAER 74
+S+ GD+ TE R DLC + L++D+N + F H S G+ +
Sbjct: 3 QSDDGDS-ITEKRYEDLCLD-LNMDKNAKDDAWISFERITHSYTLEASR-GDAI------ 53
Query: 75 FWFAFVLYLVRR--LSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
W LY+ R L G + +G N +L +LR KL++++FFK++ ++L
Sbjct: 54 HWLTCALYVSCRKSLVPTVGRGIMEG---NGVSLTRLLRSSKLSLIEFFKKMKKWL---- 106
Query: 133 PILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF------LPSDANGDKQSA 186
++ E R + L+ NF +++ K YK I+ + F P KQ
Sbjct: 107 ----DMANLPEEFRSKVDRLERNFSVSTVIFKKYKPIFLDLFNDPAKEAPRPPRSRKQKR 162
Query: 187 AASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNI 246
+ + D + W +F+ ++ +F + ++ LV+ +L+ + N +
Sbjct: 163 LPCS---LKDVFNYTWTMFILVK----GKFPAI---SDDLVNSYHLLLCCCDWLYANALL 212
Query: 247 HDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKP----CEASEC 302
+ + + G L +D+ D R E I +L ++ EA
Sbjct: 213 SNRGDLLNRKFPG------LPEKFDSK--DYRPPTE--TPCIVQLLSERHEGLLLEAKGI 262
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNIL-------------EKDYDNATRNKGELD 349
K+ + Y L D+ LN+L Y+ N +LD
Sbjct: 263 KAHWWQP-------YITKLFDNKVCGLILNVLIYLMFFVDFSKTINGTYEEYVLNLCDLD 315
Query: 350 ERVFINEDDSL-LGSGSLSGG--AVNITGAKRKFDSLASPVKTITSPLSP--HRSSASHP 404
ER+F+ ++ + +G+ + S G A + + + +++ +PL+P R S
Sbjct: 316 ERIFLGDEAYIEIGTPAKSFGDFAHQMQMHAGQMKQHVNETRSL-APLTPLTGRKYLSDK 374
Query: 405 NGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA 464
+G +TPVSTA + L++++ + PS L K C ++ D+M R
Sbjct: 375 DG---------EITPVSTATQSVSRLQSLLSGRKTSPSECLLEIFKLCSRNPHEDIMARV 425
Query: 465 HIILEAIFPSSGLGERCVTGSLQ--GANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQV 522
+ E ER S G+++ +A++R LY++ LE + E
Sbjct: 426 KEMGET------FCERYAQPSDDHPGSHV---DFAKKRLQLGESLYFKALENVMKNEM-- 474
Query: 523 LHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFI 582
K +LL + FHR + A E+V+ ++ + FP +++ + + KVIE +
Sbjct: 475 ---KRKQNLLEQDIFHRSLFASCLEIVIFSYNS-QRAFPWIIDVFNLDPYHFYKVIEVLV 530
Query: 583 RHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
R EE L R++ +H+N +EE +L+S+ W+ GS +++++
Sbjct: 531 RAEEGLSRDVVKHMNHIEELILDSLAWKDGSMLWDAI 567
>gi|301096798|ref|XP_002897495.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106955|gb|EEY65007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1063
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 183/435 (42%), Gaps = 82/435 (18%)
Query: 255 KSNKGV----DLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENI 310
KS GV L+ +LC+ D+ + E ++ + + + L+
Sbjct: 263 KSGAGVKTSAQLLEALCAAPKVDPADVSRASEHLGLVLQQLRDE----------QVLQKP 312
Query: 311 DTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNK-GELDERVFINED--DSLLGSGSLS 367
+ + + L D L +++ L Y + G+LDE F+N +++G+
Sbjct: 313 EDEHTVLSVTLFSDEVLEANVTRLADKYKTDYLDGCGKLDETFFLNARVRRTIMGANVTQ 372
Query: 368 G----GAVNITGAKRKF-DSLASPVKT-------ITSPLSP----------HRSSASHPN 405
+V++TGA R ++ SPV+ ++P +P HR PN
Sbjct: 373 ADSGDNSVDLTGASRSTAHAMLSPVRRNMLARRRDSNPTTPATRGMMTPPRHRQQFFPPN 432
Query: 406 ---------------GIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP-SAELERFL 449
G + + + TPV+ A+ T W+R + P + +L RF
Sbjct: 433 SPLTHSWHWQGSPRYGASPRPSPGSMRTPVTAAVETNNWVRETLSSTMLTPVTPQLRRFF 492
Query: 450 KSCDKDVTTDVMR--RAHIILEAIFPSSGLGERCVTGSLQ-GANLM-------------D 493
C D T + R R H L ++G R G ++ A LM
Sbjct: 493 SDCTVDPTQRITRVLREHSELLLAARTTG---RVTAGRVRFTATLMVDEQEDTDENESAR 549
Query: 494 NIWAEQRRLEALK--------LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACS 545
NI ++LK L+YRVLE + +E + L + + LL N+ F + ACS
Sbjct: 550 NISFSSGVDDSLKRTKNLTIVLFYRVLEPLLQSERERLRTNDFSKLLNNDVFLAALFACS 609
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
AE+VL H +T+ +P +LE + AF ESF+++ LP L++H+ ++ R+L+
Sbjct: 610 AEVVLKAHSLITISYPFLLEHLHVNAFHFVTTSESFVKYAPKLPSALKKHMGDVKNRILD 669
Query: 606 SMVWEKGSSMYNSLT 620
S VW+ S++Y L+
Sbjct: 670 SAVWKSDSALYQLLS 684
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 700 VKDRLLGLNNLKS-KPLPPPLQSAFASPTRPN-----PGGGGETCAETG----INIFFCK 749
VK+R+L KS L L S ++P P+ G T + G + +F+ K
Sbjct: 663 VKNRILDSAVWKSDSALYQLLSSTTSAPNTPSLTDRLSRDGSATSSPAGHAPVLRLFYRK 722
Query: 750 INKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKI 809
+ AA RI + L L + ++ ++ + L +RH+D I+LC Y V K+
Sbjct: 723 VLSRAASRIYQLCNLLGLDSTDQNQIWTAVKECITSHQYLLKDRHLDLIVLCNIYAVCKV 782
Query: 810 SQ--------LNLTFREIIYNY----RKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI 857
S+ ++F+ ++ Y R+ P V + ++ E+ +I
Sbjct: 783 SRGPNISQAAATMSFKRLLTCYKQLNRQTPGNGEGVIDGILLE---------DEKSRGNI 833
Query: 858 ITFYNKIFVPAVKPLLVEL 876
I FYN+ ++ +K +++
Sbjct: 834 IKFYNRCYITPMKVFILQF 852
>gi|402591285|gb|EJW85215.1| hypothetical protein WUBG_03875, partial [Wuchereria bancrofti]
Length = 261
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 37/164 (22%)
Query: 753 LAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL 812
LAAVR+ + ER++L ++ R+ + LF+ +L TSL RH+DQ ++CC Y VAKI Q
Sbjct: 4 LAAVRLRDLCERVRLDEKGRQRAWTLFEHVLRTETSLMAGRHLDQNLMCCLYVVAKIGQQ 63
Query: 813 NLTFREIIYNYRKQPQCKPQVFRSVFV-----------DWASARQSG-------RSEQ-- 852
N++F +I+Y+YR QPQ +V+R V V D AS G RSE
Sbjct: 64 NISFHDIMYHYRHQPQAASRVYRRVLVENTSSPPIILDDGASHDSVGSASGDKFRSESSV 123
Query: 853 -----------------DHVDIITFYNKIFVPAVKPLLVELGPA 879
+++D+I +YN IF+ VK + +L P
Sbjct: 124 SGAVTGSGTATPEHQNVEYIDLIKYYNHIFIAHVKSFVQKLQPG 167
>gi|17942636|pdb|1GH6|B Chain B, Retinoblastoma Pocket Complexed With Sv40 Large T Antigen
Length = 333
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 29/216 (13%)
Query: 424 MTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA----HIILEAIFPSSGLGE 479
M T + L ++ +PS L + +C + +++R +I E + G G
Sbjct: 1 MNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGAG- 59
Query: 480 RCVT-GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
CV GS QR ++LYYRV+E+M +E + L +N + LL + FH
Sbjct: 60 -CVAIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFH 105
Query: 539 RCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 106 MSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLT 165
Query: 590 RELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
RE+ +HL E R++ES+ W S +++ + ++ V
Sbjct: 166 REMIKHLERCEHRIMESLAWLSDSPLFDLIKQSKLV 201
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 206 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 264
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 265 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 314
Query: 859 TFYNKIFVPAVK 870
FYN +F+ +K
Sbjct: 315 VFYNSVFMQRLK 326
>gi|395505952|ref|XP_003757300.1| PREDICTED: retinoblastoma-like protein 2 [Sarcophilus harrisii]
Length = 1059
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 123/564 (21%), Positives = 232/564 (41%), Gaps = 107/564 (18%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ + N +L ILR + ++++FF ++ ++
Sbjct: 54 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW------- 103
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL------PSDANGDKQSAAA 188
++ R + L+ NF +++ K Y+ I+++ F P G K
Sbjct: 104 -EDMANLPSRFRERTERLERNFTVSAVIFKKYEPIFQDIFRYSQEEPPCQQRGRKYRRQP 162
Query: 189 STSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILI---IHVPVR----- 240
T +S+ +F W+LF+ + + DLV + L+ L ++ + R
Sbjct: 163 CT---VSEVFQFCWVLFVYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELLN 219
Query: 241 --FRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPC 297
F+ ++ K S+ +I LC+++D + + I E I + +KK
Sbjct: 220 PNFKGLPEDFHNKDSKPSSDPPCVIEPLCALHDGLVLEAKGIKEHFWKPYIRKLFEKKLL 279
Query: 298 EASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED 357
+ E ENL +D + S+ + K Y+ + G LDER+F+ +
Sbjct: 280 KGRE---ENLTG-----------FLDPGNFGDSIKAINKAYEEYVLSVGNLDERIFLG-E 324
Query: 358 DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVV 417
D+ G+L+ +G + A V+ S H + ++ + + M
Sbjct: 325 DAEEEIGTLTRCLNTGSGLE-----TAERVQV-------KYSLQQHFDKVSKVSLALMAC 372
Query: 418 T--PVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSS 475
T P + K + + C ++ + SC K++ + R A I
Sbjct: 373 TRDPTQSIANRLKEMYEIYCQ-----HSQTDGDFSSCAKEIASKHFRYAEI--------- 418
Query: 476 GLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
LYY+VLE++ E + L +L+ +L +
Sbjct: 419 -------------------------------LYYKVLESVIDQEQKRLGDIDLSGILEQD 447
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
FHR +LAC E++ ++K FP + E + + KVIE FIR E+ L RE+ +H
Sbjct: 448 AFHRSLLACCLEVITFSYKPPGN-FPFIAEIFDVPLYHFYKVIEVFIRAEDGLCREVVKH 506
Query: 596 LNSLEERLLESMVWEKGSSMYNSL 619
LN +EE++L+ M W+ S +++ +
Sbjct: 507 LNHIEEQILDHMAWKPESPLWDRI 530
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA+VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 754 SSLSLFFRKVYHLASVRLRDLCAKLDISDELRKKIWTCFEFSVVQCPELMMDRHLDQLLM 813
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV-----------------DWAS 843
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + + +
Sbjct: 814 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKRRRRRNSGSSDSRSHQNSPT 873
Query: 844 ARQSGRSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN--- 895
R+ +D ++ + + VP + P L A + ++ ++ +NN
Sbjct: 874 EVNKDRTSRDSSPVMRSSSTLPVPQPNSAPPTPTRLTGANSDIEEEERGDLIQFYNNIYV 933
Query: 896 -----------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHS 942
P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 934 EQIQTFARKYSQANTTDVPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEMMLSPR 990
Query: 943 SKSYYACVGESTHAYQSPSKDLTDINHRLNSNR---RVRGTLNFDD 985
K +Y + SPSK L +IN + + + RG L DD
Sbjct: 991 EKIFY-------YFSSSPSKRLKEINSMIRTGETPTKKRGIL-LDD 1028
>gi|346464585|gb|AEO32137.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 35/324 (10%)
Query: 527 NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEE 586
+LT+ L++ F + + AC E+V+ + + FP +LE + ++ K+IE IR EE
Sbjct: 11 DLTAHLSHSLFLQSLFACCLEIVMFCYNS-QREFPWILEVFTLMPYNFYKIIEPLIRAEE 69
Query: 587 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAI 646
L RE+ +HLN +EE++LE + W+ S ++ ++ + P+P+ +
Sbjct: 70 GLWREVVKHLNHIEEQILECLAWKDDSPLWEAIEHSE--------------QPVPTCKEV 115
Query: 647 ATHIN---FSSGGLSPVHSLHKHETSPGQNGDIRSPK------RPCTDYRSVLVERNNFT 697
+ ++ S H + G GD P+ + + R + V+ + T
Sbjct: 116 LLQRQIETYDGTDVTEAQSPAAHLSLRGLKGDQDGPQSSKKAVQGSSTTRYLPVDGKS-T 174
Query: 698 SPVKD----RLLGLNNLK-SKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINK 752
P D ++ L+ S P P SA A P+ G + +FF K+
Sbjct: 175 VPATDSSRPNIVTLSTASVSSPGP---ASATAPPSSVPEAPKGRPLRSGSLALFFRKVYH 231
Query: 753 LAAVRINAMVERLQLSQQ-IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ 811
LA VR + RL + Q I+ ++ F+ + +T L +RH+DQ+ILC Y + K+++
Sbjct: 232 LAGVRFQDICARLGIMQMDIQLKIWTCFEHSIVCQTDLMRDRHLDQLILCAVYVITKVTR 291
Query: 812 LNLTFREIIYNYRKQPQCKPQVFR 835
++ + + R+QPQ K V+R
Sbjct: 292 VDKSSGDPSL-LRQQPQNKSHVYR 314
>gi|348679406|gb|EGZ19222.1| hypothetical protein PHYSODRAFT_354183 [Phytophthora sojae]
Length = 1073
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 121/267 (45%), Gaps = 30/267 (11%)
Query: 404 PNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKP-SAELERFLKSCDKDVTTDVMR 462
P GI+ + + TPVS A+ T+ W+R + P + L C D T ++R
Sbjct: 469 PPGISPRPSPSSMRTPVSAAVETSNWVRETLSSTMLTPVTPRLRGLFSDCAVDPTERIIR 528
Query: 463 -----------------------RAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ 499
R+ +++ P E GS + A+ +
Sbjct: 529 VLGEHSDLLLAARTATRVSSRRVRSTVMMMDDGPDDNADE---NGSGRNASYSSGVDDSL 585
Query: 500 RRLEALK--LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT 557
+R + L L+YRVLE + +E + L + + LL NE F + ACSAE+VL H +T
Sbjct: 586 KRTKNLSIVLFYRVLEPLLVSERERLRNNDFSKLLNNEVFLAALFACSAEVVLKAHSLIT 645
Query: 558 MLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
+ +P +L+ + AF ESF+++ LP L++H+ ++ R+L+S+VW S++Y
Sbjct: 646 ISYPFLLDHLRVNAFHFVTTSESFVKYAPKLPAALKKHMGDVKNRILDSLVWRSDSALYQ 705
Query: 618 SLT-VARPVLSAEINRLGLLADPMPSL 643
L V RP S L + P+L
Sbjct: 706 LLAGVRRPPTSVPGTPLSAASPSTPNL 732
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 724 ASPTRPN------PGGGGETCAETG----INIFFCKINKLAAVRINAMVERLQLSQQIRE 773
ASP+ PN G G G + +FF + AA RI + L L +
Sbjct: 725 ASPSTPNLTDRLNGNGVGTPSGAAGHAPVLRLFFRMVLSRAASRIYQLCNLLGLDSTDQN 784
Query: 774 SVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ--------LNLTFREIIYNYRK 825
++ ++ + L +RH+D I+LC Y V K+S+ ++F+ ++ +Y++
Sbjct: 785 QIWTAVKECITSHHYLLRDRHLDLIVLCNIYAVCKVSRGPNVSQAASTMSFKRLLASYKQ 844
Query: 826 QPQCKPQVFRSVFVDWASARQSGR---------SEQDHVDIITFYNKIFVPAVKPLLVEL 876
+ P + + ++G SE DII FYN+ ++ +K +++
Sbjct: 845 LNRQGPTGTNATGGSPLVSSRNGEGVTHGIKLDSEHSRGDIIKFYNRCYITPMKAFILQF 904
>gi|170523026|gb|ACB20723.1| retinoblastoma 1 [Ovis aries]
Length = 260
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 39/280 (13%)
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---SSGLGERCV 482
T + L ++ +PS L + +C + +++R I + IF + +G+ C+
Sbjct: 2 TIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGD-IFKEKFAKAVGQGCM 60
Query: 483 -TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 541
GS QR ++LYYRV+E+M +E + L +N + LL + FH +
Sbjct: 61 EIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSL 107
Query: 542 LACSAELVLATHKT---------VTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
LAC+ E+V+AT+ + FP +L + AFD KVIESFI+ E +L RE+
Sbjct: 108 LACALEVVMATYSRSMSQSLDTGTDLSFPWILNVFNLKAFDFYKVIESFIKAEANLTREM 167
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLA--DPMPSLDAIATHI 650
+HL E R++ES+ W S +++ + A+ +R G + +P +L+ +
Sbjct: 168 IKHLERCEHRIMESLAWLSDSPLFDLIKQAK-------DREGPVDHFEPACTLN-LPLQN 219
Query: 651 NFSSGG--LSPVHSLHKHETSPGQNGDIRSPKRPCTDYRS 688
N ++ LSPV S K ++P N S + + +++
Sbjct: 220 NHTAADMYLSPVRSPKKKASTPRANSTPNSEAQATSAFQT 259
>gi|330689525|pdb|3POM|A Chain A, Crystal Structure Of The Unliganded Retinoblastoma Protein
Pocket Domain
gi|330689526|pdb|3POM|B Chain B, Crystal Structure Of The Unliganded Retinoblastoma Protein
Pocket Domain
Length = 352
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 27/213 (12%)
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---SSGLGERCV 482
T + L ++ +PS L + +C + +++R I IF + +G+ CV
Sbjct: 5 TIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFAKAVGQGCV 63
Query: 483 -TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 541
GS QR ++LYYRV+E+M +E + L +N + LL + FH +
Sbjct: 64 EIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSL 110
Query: 542 LACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L RE+
Sbjct: 111 LACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREM 170
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSLTVARPV 625
+HL E R++ES+ W S +++ + ++ V
Sbjct: 171 IKHLERCEHRIMESLAWLSDSPLFDLIKQSKLV 203
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 210 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 268
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 269 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 318
Query: 859 TFYNKIFVPAVK 870
FYN +F+ +K
Sbjct: 319 VFYNSVFMQRLK 330
>gi|431914123|gb|ELK15382.1| Retinoblastoma-like protein 2, partial [Pteropus alecto]
Length = 974
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 135/274 (49%), Gaps = 51/274 (18%)
Query: 717 PPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVY 776
PPL S+ P + + +++FF K+ LA VR+ + +L +S ++R+ ++
Sbjct: 709 PPLTSSSGRPRK-----------TSSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIW 757
Query: 777 CLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRS 836
F+ + Q L +RH+DQ+++C Y +AK+++ + +F+ I+ YR QPQ + Q +
Sbjct: 758 TCFEFSIIQCPELMMDRHLDQLLMCAIYVMAKVTKDDRSFQNIMRCYRTQPQARSQPGSA 817
Query: 837 VFVDWASARQSGRS----EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVN 892
R +G S E++ D+I FYN I++ +K AMK ++ + ++
Sbjct: 818 ---PPTPTRLTGASSDMEEEERGDLIQFYNNIYIKQIKTF---------AMKYSQANIMD 865
Query: 893 HNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISHSSKSYYACV 950
+P +S +P + SP+++ S H VY+SP K + ++S K +Y
Sbjct: 866 ---------APPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSPREKIFY--- 910
Query: 951 GESTHAYQSPSKDLTDINHRLNSNR---RVRGTL 981
+ SPSK L +IN + + + RG L
Sbjct: 911 ----YFSNSPSKRLREINSMIRTGETPTKKRGIL 940
Score = 90.5 bits (223), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 122/569 (21%), Positives = 228/569 (40%), Gaps = 116/569 (20%)
Query: 76 WFAFVLYLVRRLSEKNGENLQQGS-NDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPI 134
W A LY+ R K+ + +G+ N +L ILR + ++++FF ++ ++
Sbjct: 20 WLACALYVACR---KSVPTVSKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKW------- 69
Query: 135 LSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF-LPSD--ANGDKQSAAASTS 191
+ R + L+ NF +++ K Y+ I+++ F P + +
Sbjct: 70 -EEMANLPQHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEPPRQQRGRKQRRQP 128
Query: 192 GYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRF 241
+S+ F W+LF+ + + DLV + L+ L ++ + V F
Sbjct: 129 CTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNF 188
Query: 242 RNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEAS 300
+ + ++ K S+ +I LCS++D + + I E I + +KK +
Sbjct: 189 KGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGK 248
Query: 301 ECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED--- 357
E ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 249 E---ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEE 294
Query: 358 -DSLL------GSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGG 410
+L GSG+ + V + ++ + ++T ++PL+ G+
Sbjct: 295 ETGILSRCLNSGSGAETAERVQMKNILQQHFDKSKALRT-STPLT----------GVRYI 343
Query: 411 ATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEA 470
+ TPVSTA + L T++ L + PS LE+ L++C +D T + R + E
Sbjct: 344 KDNSPCATPVSTATHSLSRLHTMLTGLRNAPSENLEQILRTCARDPTQAIANRLKEMFEI 403
Query: 471 IFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTS 530
S E T + I ++ R + LYY+VLE++ E + L +L+
Sbjct: 404 YSQHSQPDEDFSTCA-------KEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS- 454
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
VIE FIR E+ L R
Sbjct: 455 ----------------------------------------------VIEVFIRAEDGLCR 468
Query: 591 ELRRHLNSLEERLLESMVWEKGSSMYNSL 619
E+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 469 EVVKHLNEIEEQILDHLAWKPESPLWDRI 497
>gi|388326926|pdb|4ELL|A Chain A, Structure Of The Inactive Retinoblastoma Protein Pocket
Domain
gi|388326927|pdb|4ELL|B Chain B, Structure Of The Inactive Retinoblastoma Protein Pocket
Domain
Length = 411
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR----AHIILEAIFPSSGLGERC 481
T + L ++ +PS L + +C + +++R +I E + +G+ C
Sbjct: 5 TIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKF--AKAVGQGC 62
Query: 482 V-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
V GS QR ++LYYRV+E+M +E + L +N + LL + FH
Sbjct: 63 VEIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMS 109
Query: 541 MLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
+LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L RE
Sbjct: 110 LLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTRE 169
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYN 617
+ +HL E R++ES W S +++
Sbjct: 170 MIKHLERCEHRIMESFAWLSDSPLFD 195
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 24/160 (15%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQ--Q 770
S TR N ET A T +++F+ K+ +LA +R+N + ERL LS+ +
Sbjct: 241 GSTTRVNSTANAETQATSAFQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPE 299
Query: 771 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 830
+ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 300 LEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAV 359
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVK 870
+ F+ V + E+++ II FYN +F+ +K
Sbjct: 360 QETFKRVLI----------KEEEYDSIIVFYNSVFMQRLK 389
>gi|158430673|pdb|2R7G|A Chain A, Structure Of The Retinoblastoma Protein Pocket Domain In
Complex With Adenovirus E1a Cr1 Domain
gi|158430675|pdb|2R7G|C Chain C, Structure Of The Retinoblastoma Protein Pocket Domain In
Complex With Adenovirus E1a Cr1 Domain
Length = 347
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---SSGLGERCV 482
T + L ++ +PS L + +C + +++R I IF + +G+ CV
Sbjct: 2 TIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFAKAVGQGCV 60
Query: 483 -TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCM 541
GS QR ++LYYRV+E+M +E + L +N + LL + FH +
Sbjct: 61 EIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSL 107
Query: 542 LACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L RE+
Sbjct: 108 LACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREM 167
Query: 593 RRHLNSLEERLLESMVWEKGSSMYN 617
+HL E R++ES+ W S +++
Sbjct: 168 IKHLERCEHRIMESLAWLSDSPLFD 192
Score = 83.6 bits (205), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 205 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 263
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 264 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 313
Query: 859 TFYNKIFVPAVK 870
FYN +F+ +K
Sbjct: 314 VFYNSVFMQRLK 325
>gi|28373873|pdb|1N4M|A Chain A, Structure Of Rb Tumor Suppressor Bound To The
Transactivation Domain Of E2f-2
gi|28373874|pdb|1N4M|B Chain B, Structure Of Rb Tumor Suppressor Bound To The
Transactivation Domain Of E2f-2
Length = 345
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 29/206 (14%)
Query: 426 TAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRA----HIILEAIFPSSGLGERC 481
T + L ++ +PS L + +C + +++R +I E + G G C
Sbjct: 2 TIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGAG--C 59
Query: 482 VT-GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRC 540
V GS QR ++LYYRV+E+M +E + L +N + LL + FH
Sbjct: 60 VAIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMS 106
Query: 541 MLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
+LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L RE
Sbjct: 107 LLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTRE 166
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYN 617
+ +HL E R++ES+ W S +++
Sbjct: 167 MIKHLERCEHRIMESLAWLSDSPLFD 192
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 205 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 263
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 264 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 313
Query: 859 TFYNKIFVPAVK 870
FYN +F+ +K
Sbjct: 314 VFYNSVFMQRLK 325
>gi|195162391|ref|XP_002022039.1| GL14434 [Drosophila persimilis]
gi|198467719|ref|XP_001354481.2| GA20332 [Drosophila pseudoobscura pseudoobscura]
gi|194103937|gb|EDW25980.1| GL14434 [Drosophila persimilis]
gi|198149378|gb|EAL31534.2| GA20332 [Drosophila pseudoobscura pseudoobscura]
Length = 833
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETG--INIFFCKINKLAAVRINAMVERLQLSQQIRESV 775
P+ A+ +P P C T + IF K+ L +RI + L L + E +
Sbjct: 555 PVWDMIATAPKPLPTHYDVNCDRTAGALQIFLRKVYLLGWLRIQKLCSELILIDKAPERI 614
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVF 834
+ +F+ + Q+T L +RH+DQII+C Y ++S+L + F +I+ YR QPQ V+
Sbjct: 615 WHIFEHSITQKTDLMKDRHLDQIIMCAIYIYIRVSKLEDPKFSDIMRAYRNQPQAVNSVY 674
Query: 835 RSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVE---LGPAGTAMKTNRVSEV 891
R V D Q + DII FYN +VP +K ++ + P T K +
Sbjct: 675 REVLFDLNDDGQPKVT-----DIIYFYNHKYVPLMKQFAIDYLNMTPDVTGCKIKAADLL 729
Query: 892 NHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVG 951
+S P+ PKKV+ H++YV+ + +++ S + Y
Sbjct: 730 -------------LSPHPSERAAQPKKVTQNHSLYVTQMPKNEIQQ--SPNQMVY----- 769
Query: 952 ESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFDD 985
Y+SP+KDL +N ++ +R+ L+F D
Sbjct: 770 ---EFYRSPAKDLQLMNEKVRGGKRM---LSFGD 797
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN----ERFHRCMLACSAELVLAT 552
A+ R A YY +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFRLAKSFYYYLLDQILQAEIKNKPEFDLKRLLVQKISLDIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VLE I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLECFSISAFEFQKIIEIVVRHGSHEGCLNRYLIKHLNSIEETCLERLAW 550
Query: 610 EKGSSMYNSLTVA 622
S +++ + A
Sbjct: 551 ASNSPVWDMIATA 563
>gi|157829808|pdb|1AD6|A Chain A, Domain A Of Human Retinoblastoma Tumor Suppressor
Length = 185
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 27/198 (13%)
Query: 423 AMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP---SSGLGE 479
M T + L ++ +PS L + +C + +++R I IF + +G+
Sbjct: 1 VMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDI-GYIFKEKFAKAVGQ 59
Query: 480 RCV-TGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
CV GS QR ++LYYRV+E+M +E + L +N + LL + FH
Sbjct: 60 GCVEIGS-------------QRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFH 106
Query: 539 RCMLACSAELVLATHKTVT---------MLFPAVLERTGITAFDLSKVIESFIRHEESLP 589
+LAC+ E+V+AT+ T + FP +L + AFD KVIESFI+ E +L
Sbjct: 107 MSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLT 166
Query: 590 RELRRHLNSLEERLLESM 607
RE+ +HL E R++ES+
Sbjct: 167 REMIKHLERCEHRIMESL 184
>gi|325186164|emb|CCA20667.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1102
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 499 QRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTM 558
+++ A L+Y VL++M AE L N T LL N F M ACS E++L H +T+
Sbjct: 603 KKKEYAKTLFYHVLQSMLIAEEARLQTSNFTWLLRNNVFLSAMFACSLEVILKAHSLITL 662
Query: 559 LFPAVLERTGITAFDLSKVIESFIRH-EESLPRELRRHLNSLEERLLESMVWEKGSSMYN 617
FP +LE + FD ++ESF++H + LP L+RHL +E+ ++ SM WE S +Y
Sbjct: 663 SFPFLLEHLEVNVFDFGLLLESFVKHVPKRLPCALKRHLRDIEQMIMASMAWESSSGLYR 722
Query: 618 SL 619
+L
Sbjct: 723 AL 724
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 133/316 (42%), Gaps = 88/316 (27%)
Query: 737 TCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHID 796
T G+++FF K+ LAA RI + L L +I V+ ++ L L +RH+D
Sbjct: 779 TITSHGLHVFFRKVFALAASRIYRLGTMLGLEPKILNQVWTAVKECLTYHHELVKDRHVD 838
Query: 797 QIILCCFYGVAKISQLN--LTFREIIYNYRK---------QP----QCKPQVFRSV-FVD 840
IILC YGV K++ + +TFR +I Y+K +P + R + VD
Sbjct: 839 HIILCSLYGVCKVNLIKPEVTFRRVIEVYKKLQTPHWAIHRPGTTGSTASDIIRHIRLVD 898
Query: 841 WASARQSGRSEQDHV---DIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNH---- 893
+++ +S + ++ V DII FYNK F+ A+K L++ K V+H
Sbjct: 899 ASTSSKSSTAPRESVPRGDIIKFYNKCFIAAMKVFLLQFQLQDKQEKMADAVIVDHSLPL 958
Query: 894 ----NNDGP----------------------------------------CPGSP------ 903
N DG PGSP
Sbjct: 959 IRSMNEDGSRESASTCDADVVAEAAATAVQMVMLGKVKTTDTTQMRELTAPGSPERNCVM 1018
Query: 904 KVSVFPALP----DMSPKKVSATHNVYVSPLRTSKMDA---LISHSSKSYYACVGESTHA 956
K + ALP SP++V ++ NVY+SPL+ S++ ++ S + YA GE
Sbjct: 1019 KAASIEALPVSVQHSSPQRVPSS-NVYMSPLQQSRLQHHRNRMTPRSHALYA-FGE---- 1072
Query: 957 YQSPSKDLTDINHRLN 972
SP++DL IN +N
Sbjct: 1073 --SPARDLALINRAVN 1086
>gi|390360951|ref|XP_799020.3| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Strongylocentrotus purpuratus]
Length = 1047
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
+TPVSTA L+ ++ + S LE K C ++ + R + E IF
Sbjct: 322 ITPVSTATQAVSKLQALLTGRKVEASELLEGIFKDCSENPAEGIASRVKEMGE-IFCQX- 379
Query: 477 LGERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNE 535
T +L N +RRL+ A LYY+VLE + AE + L KNLT LL +E
Sbjct: 380 -----YTQALDEGNAGSPQDFAKRRLKLAENLYYKVLENIMLAEKRRL--KNLTHLLEHE 432
Query: 536 RFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH 595
FHR + AC E+V+ + + FP +LE I AF KVIE +R EE L R++ +H
Sbjct: 433 LFHRSLFACCLEVVIFAYNS-QRTFPWILEAFEIPAFHFYKVIELILRAEEGLSRDIVKH 491
Query: 596 LNSLEERLLESMVWEKGSSMYNSL 619
LN +EE +L+ W S +++ L
Sbjct: 492 LNFIEEAILQDYAWRSDSPLWDLL 515
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTS 788
P P G I IFF K+ L VR+ + RL+LS +R ++ + + +T
Sbjct: 738 PRPKRTG------SIGIFFRKVYHLMNVRLLDLCHRLKLSDDLRRKIWTCLEHAVVHKTE 791
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV 839
+ +RH+DQII+C Y + +++Q +F+EI+ +YR QPQ V+RSV +
Sbjct: 792 MMRDRHLDQIIMCTMYIICRVTQNPCSFQEIMRSYRFQPQASSHVYRSVLI 842
>gi|242008733|ref|XP_002425155.1| P107, putative [Pediculus humanus corporis]
gi|212508849|gb|EEB12417.1| P107, putative [Pediculus humanus corporis]
Length = 842
Score = 96.3 bits (238), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 152/303 (50%), Gaps = 22/303 (7%)
Query: 318 FENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAK 377
F +L+D S+ + K YD T + GE DER+F++ D++ G+L N+ G +
Sbjct: 228 FTSLLDPLYFESNFKEINKVYDKYTLSVGEFDERIFLS-DEANEDIGTLD----NMDGDE 282
Query: 378 RKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPL 437
K +S S K++ P SP N +TS+ T +STA L+T++
Sbjct: 283 GKKNS-QSESKSLAPP-SPLTGKKWLKNDERETSTSQN--TALSTATQAINRLKTILEGR 338
Query: 438 PSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDN-IW 496
+ PS +L +C+++ + F + LG++ Q + I+
Sbjct: 339 QAHPSEKLYEIYATCEENPEEKI----------DFIVNELGKKFGEAYNQPNDHTPAIIF 388
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
+ + + A KL+Y++LE + E ++ NL ++ + H+C+ ACS E+++ T+ +
Sbjct: 389 YDDKLVLAKKLFYKLLENILLYEKKIKPDVNL-NVRSQNIVHQCLFACSLEIIIYTYNSQ 447
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP +L I ++ KVIE +R E+ LPR + ++L+ +EE +LE++VW+ S ++
Sbjct: 448 KS-FPWILNALNIESYYFYKVIEMVLRTEDQLPRVIVKYLSMVEENILETLVWQNSSPLW 506
Query: 617 NSL 619
+L
Sbjct: 507 IAL 509
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 121/275 (44%), Gaps = 52/275 (18%)
Query: 733 GGGETCAETG-INIFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLF 790
E TG ++IFF K L++VR+ + +L + + + ++ F+ + L
Sbjct: 541 NASEKPKRTGSLSIFFRKFYSLSSVRMQDLCVKLGIKDISLMKKIWTCFEHCIVHHIELM 600
Query: 791 FNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV----------- 839
+RH+DQI++C Y + K +F EI+ YR QPQ V+RSV +
Sbjct: 601 QDRHLDQILMCSIYVICKFEPTERSFMEIMKCYRFQPQAASHVYRSVLLSKTALGKFFKR 660
Query: 840 -DWASARQSGRSE-----------------QDHVDIITFYNKIFVPAVKPLLVELGPAGT 881
+ S + +G S Q+ D+I FYN ++V V+ +
Sbjct: 661 NNENSNKGNGISSVPLTPNNLAGTSTSYDNQERGDLIKFYNSVYVATVQSFV-------N 713
Query: 882 AMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKK----VSATHNVYVSPLRTSKMDA 937
++N+ S+V+ P P S P + +S K VS H+VYV PL TS
Sbjct: 714 RFRSNQQSDVSLQLLSPIPKGRSTSKSP-MRRVSQKHPVFIVSQKHSVYVRPLDTS---F 769
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN 972
+S S++ CV +SP+KDL IN +N
Sbjct: 770 NLSSGSQALTYCVN------RSPAKDLRAINDMIN 798
>gi|353233249|emb|CCD80604.1| putative retinoblastoma-like protein [Schistosoma mansoni]
Length = 1131
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 54/318 (16%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
I IFF + ++A++R+ + ERL L++++ ++ +Q++ T L +R +DQ+I+CC
Sbjct: 815 IAIFFRQTYQVASLRLRDLCERLSLTRELMAKIWTCIEQVIVHETELLRDRCLDQVIMCC 874
Query: 803 FYGVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ LTF +I+ YR QPQ ++R V ++ S + E+ D+ FY
Sbjct: 875 IYGICKLVLYRPLTFVDIVQVYRMQPQSYRDIYRRVLINRVSYGRGNTEERG--DLSRFY 932
Query: 862 NKIFVPAVKPLLVELGPA-GTAMKTNRVSEVNHNNDGPCPGS-----------PKVSVFP 909
N IF+P +K + + T +T+ H++ G P +S P
Sbjct: 933 NVIFLPQMKDFIKKAASVRSTYNETDPNCRTGHHSLGSDSTDDNTVLNQWTLHPSLSPMP 992
Query: 910 ALPD-----------------------MSPKKVSATHNVYVSPLRTSKMDALISHSSKSY 946
L + M +++++ N+++SP++ ++ S K
Sbjct: 993 MLVNNLASNTAAALNLGFDPATTSGDIMQARRLASNRNIFISPVKQQ-----VNLSPKKV 1047
Query: 947 YACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFD---DVDVDVGLVSDSMVANS-- 1001
VG ST KDL D+N ++S R N G + + VANS
Sbjct: 1048 IFTVGRST------GKDLQDVNLMISSAERRASMANLTMGLKRPAGSGSTTTTYVANSSP 1101
Query: 1002 LYLQNGSAAASTCAVLKP 1019
+ +G++++ T ++ P
Sbjct: 1102 FTVTSGTSSSRTVTLVGP 1119
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 141/647 (21%), Positives = 270/647 (41%), Gaps = 94/647 (14%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
+ E R DLC++ L +D + +E + +++ + AN S G+ + W L
Sbjct: 10 EPVEKRFEDLCQD-LCIDGSVREEAWEKYKD----VWANYSIDGDQIQ------WLVCSL 58
Query: 82 YLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYG 140
Y R +G + G DN + +L +L K+++V FF + ++ + +
Sbjct: 59 YECCRRCLSDGIS---GHVDNAYVSLSRLLSAAKMSMVQFFHRIRKWADMTDML------ 109
Query: 141 ADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRF 200
D +R+E E Q F S++ +++ R + F ++ D +++ +G SD RF
Sbjct: 110 DDMRDRIELIERQ--FSVSSVIFRNFGRSFGVLF----SDTDYETSQMRPTG--SDLFRF 161
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV-RFRNFNIHDSSRFVKKSNKG 259
WLLF+ R + DLV + L L + V + R R+ + + +
Sbjct: 162 TWLLFIKSRASFPAVTDDLVNSYHLLACCLDWTLGAVMLSRRRDLINMEQNGLPRDFLTS 221
Query: 260 VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFE 319
V + C +D LR I E + + ++ K + + L I+ D LI
Sbjct: 222 VAQNKTWCPPHDEPTCMLRPICEDND---VNYVECKTVKEHFFRPFMLRLIEKD-LIKLH 277
Query: 320 -----NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN----EDDSLLGSGSLSGG- 369
+L++ + ++ L +Y+ G+ DER++++ E+ +G ++
Sbjct: 278 PSVLGSLLEQENFEITIQNLNNNYEEYIIGTGDFDERIYLSPNASEEIGSIGESTVQSDF 337
Query: 370 --AVNITGAKRKF--DSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
V +T + R++ + S T ++A + + GG P + +
Sbjct: 338 HLPVGLTPSARRYMLEVSNSGFGGFTETTRRGNANAGAISRLNGGVN---FSNPEARSQN 394
Query: 426 TAKWLRTVICPLPSKPSAELERFLKS-CDK----------DVTTDVMRRAHIILEAIFPS 474
+ L+ ++ ++P L + + C D + +RA+ L+++ S
Sbjct: 395 LNQ-LQILLNGRNNEPCESLVHLINAHCSVSPLSTIRERLDNLGEQFQRAYAGLKSV-NS 452
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAK------- 526
SG+ T +L I A Q+RL+ LYY LE + E + + +
Sbjct: 453 SGVTITSTTNNLA-------ISAAQQRLQLCYPLYYMALENILLDEIRRIEKRLTTTTSL 505
Query: 527 --------------NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAF 572
+LT+LL + FHR + C E+V+ + FP +LE + +
Sbjct: 506 SSSNNSNQIRRTRPDLTTLLAQDTFHRALFICCMEIVMLSCDPPNHHFPWILEALNLDSV 565
Query: 573 DLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
KVIE +R + LPRE+ ++LN + E +L+S W SS+++ L
Sbjct: 566 QFYKVIEVLVRSLD-LPREIVKYLNQVVEFILDSYAWRTNSSIWSVL 611
>gi|256075256|ref|XP_002573936.1| hypothetical protein [Schistosoma mansoni]
Length = 995
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 143/318 (44%), Gaps = 54/318 (16%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
I IFF + ++A++R+ + ERL L++++ ++ +Q++ T L +R +DQ+I+CC
Sbjct: 679 IAIFFRQTYQVASLRLRDLCERLSLTRELMAKIWTCIEQVIVHETELLRDRCLDQVIMCC 738
Query: 803 FYGVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YG+ K+ LTF +I+ YR QPQ ++R V ++ S + E+ D+ FY
Sbjct: 739 IYGICKLVLYRPLTFVDIVQVYRMQPQSYRDIYRRVLINRVSYGRGNTEERG--DLSRFY 796
Query: 862 NKIFVPAVKPLLVELGPA-GTAMKTNRVSEVNHNNDGPCPGS-----------PKVSVFP 909
N IF+P +K + + T +T+ H++ G P +S P
Sbjct: 797 NVIFLPQMKDFIKKAASVRSTYNETDPNCRTGHHSLGSDSTDDNTVLNQWTLHPSLSPMP 856
Query: 910 ALPD-----------------------MSPKKVSATHNVYVSPLRTSKMDALISHSSKSY 946
L + M +++++ N+++SP++ ++ S K
Sbjct: 857 MLVNNLASNTAAALNLGFDPATTSGDIMQARRLASNRNIFISPVKQQ-----VNLSPKKV 911
Query: 947 YACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFD---DVDVDVGLVSDSMVANS-- 1001
VG ST KDL D+N ++S R N G + + VANS
Sbjct: 912 IFTVGRST------GKDLQDVNLMISSAERRASMANLTMGLKRPAGSGSTTTTYVANSSP 965
Query: 1002 LYLQNGSAAASTCAVLKP 1019
+ +G++++ T ++ P
Sbjct: 966 FTVTSGTSSSRTVTLVGP 983
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 141/647 (21%), Positives = 270/647 (41%), Gaps = 94/647 (14%)
Query: 22 DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVL 81
+ E R DLC++ L +D + +E + +++ + AN S G+ + W L
Sbjct: 10 EPVEKRFEDLCQD-LCIDGSVREEAWEKYKD----VWANYSIDGDQIQ------WLVCSL 58
Query: 82 YLVRRLSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYG 140
Y R +G + G DN + +L +L K+++V FF + ++ + +
Sbjct: 59 YECCRRCLSDGIS---GHVDNAYVSLSRLLSAAKMSMVQFFHRIRKWADMTDML------ 109
Query: 141 ADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRF 200
D +R+E E Q F S++ +++ R + F ++ D +++ +G SD RF
Sbjct: 110 DDMRDRIELIERQ--FSVSSVIFRNFGRSFGVLF----SDTDYETSQMRPTG--SDLFRF 161
Query: 201 GWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPV-RFRNFNIHDSSRFVKKSNKG 259
WLLF+ R + DLV + L L + V + R R+ + + +
Sbjct: 162 TWLLFIKSRASFPAVTDDLVNSYHLLACCLDWTLGAVMLSRRRDLINMEQNGLPRDFLTS 221
Query: 260 VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFE 319
V + C +D LR I E + + ++ K + + L I+ D LI
Sbjct: 222 VAQNKTWCPPHDEPTCMLRPICEDND---VNYVECKTVKEHFFRPFMLRLIEKD-LIKLH 277
Query: 320 -----NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFIN----EDDSLLGSGSLSGG- 369
+L++ + ++ L +Y+ G+ DER++++ E+ +G ++
Sbjct: 278 PSVLGSLLEQENFEITIQNLNNNYEEYIIGTGDFDERIYLSPNASEEIGSIGESTVQSDF 337
Query: 370 --AVNITGAKRKF--DSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMT 425
V +T + R++ + S T ++A + + GG P + +
Sbjct: 338 HLPVGLTPSARRYMLEVSNSGFGGFTETTRRGNANAGAISRLNGGVNFS---NPEARSQN 394
Query: 426 TAKWLRTVICPLPSKPSAELERFLKS-CDK----------DVTTDVMRRAHIILEAIFPS 474
+ L+ ++ ++P L + + C D + +RA+ L+++ S
Sbjct: 395 LNQ-LQILLNGRNNEPCESLVHLINAHCSVSPLSTIRERLDNLGEQFQRAYAGLKSV-NS 452
Query: 475 SGLGERCVTGSLQGANLMDNIWAEQRRLE-ALKLYYRVLEAMCTAEAQVLHAK------- 526
SG+ T +L I A Q+RL+ LYY LE + E + + +
Sbjct: 453 SGVTITSTTNNLA-------ISAAQQRLQLCYPLYYMALENILLDEIRRIEKRLTTTTSL 505
Query: 527 --------------NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAF 572
+LT+LL + FHR + C E+V+ + FP +LE + +
Sbjct: 506 SSSNNSNQIRRTRPDLTTLLAQDTFHRALFICCMEIVMLSCDPPNHHFPWILEALNLDSV 565
Query: 573 DLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
KVIE +R + LPRE+ ++LN + E +L+S W SS+++ L
Sbjct: 566 QFYKVIEVLVRSLD-LPREIVKYLNQVVEFILDSYAWRTNSSIWSVL 611
>gi|443718002|gb|ELU08799.1| hypothetical protein CAPTEDRAFT_192080 [Capitella teleta]
Length = 1021
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 86/305 (28%)
Query: 721 SAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQ 780
SA +P P G + +FF K+ LA+VR+ + ERL + ++R ++ F+
Sbjct: 691 SATEAPPSNKPKKSG------SLPLFFRKVYHLASVRLRDLCERLDVDCELRAKIWTCFE 744
Query: 781 QILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVD 840
+L + L +RH+DQ+I+ Y ++K+++ + +F+EI+ YR QPQ + V+RSV +
Sbjct: 745 HVLMEHIELMRDRHLDQMIMSSVYVMSKVTEKDTSFQEIMRCYRLQPQAQSHVYRSVLLT 804
Query: 841 ---------------WASARQSGRSE---------------------------------- 851
AS ++ R+E
Sbjct: 805 SRKRHSSGDSTVTSRSASPVEAARTERLSTIRSTSTLPAATPASQPPTPTRLAGTGTAFE 864
Query: 852 -----QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVS 906
+D D+I FYN ++V +K + HN +P +S
Sbjct: 865 FEDRGEDRGDLIKFYNSVYVKKIKAFALRFS--------------AHNIGKTGEAAPILS 910
Query: 907 VFPALP--DMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDL 964
P + +SP+ VS+ H++YVSP K +L++ +K Y C +SP++DL
Sbjct: 911 PLPVVRPHPLSPRCVSSKHSIYVSP---RKNQSLMTPHTKMLY-CFN------RSPARDL 960
Query: 965 TDINH 969
+ IN+
Sbjct: 961 SAINN 965
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 143/296 (48%), Gaps = 34/296 (11%)
Query: 338 YDNATRNKGELDERVFINEDDSL-LGSGSLSGG--AVNITGAKRKFDSLASPVKTITSPL 394
Y+ N +LDER+F+ ++ + +G+ + S G A + + + +++ +PL
Sbjct: 243 YEEYVLNLCDLDERIFLGDEAYIEIGTPAKSFGDFAHQMQMHAGQMKQHVNETRSL-APL 301
Query: 395 SP--HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSC 452
+P R S +G +TPVSTA + L++++ + PS L K C
Sbjct: 302 TPLTGRRYLSDKDG---------EITPVSTATQSVSRLQSLLSGRKTSPSECLLEIFKLC 352
Query: 453 DKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQ--GANLMDNIWAEQRRLEALKLYYR 510
++ D+M R + E ER S G+++ +A++R LY++
Sbjct: 353 SRNPHEDIMARVKEMGET------FCERYAQPSDDHPGSHV---DFAKKRLQLGESLYFK 403
Query: 511 VLEAMCTAEAQVLHAK-------NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAV 563
LE + E + K + ++LL + FHR + A E+V+ ++ + FP +
Sbjct: 404 ALENVMKNEMKRKQVKEAAGKTTDFSNLLEQDIFHRSLFASCLEIVIFSYNS-QRAFPWI 462
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
++ + + KVIE +R EE L R++ +H+N +EE +L+S+ W+ GS +++++
Sbjct: 463 IDVFNLDPYHFYKVIEVLVRAEEGLSRDVVKHMNHIEELILDSLAWKDGSMLWDAI 518
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 15 ESNAGDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAER 74
+S+ GD+ TE R DLC + L++D+N + F H S G+ +
Sbjct: 3 QSDDGDS-ITEKRYEDLCLD-LNMDKNAKDDAWISFERITHSYTLEASR-GDAI------ 53
Query: 75 FWFAFVLYLVRR--LSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSG 132
W LY+ R L G + +G N +L +LR KL++++FFK++ ++L
Sbjct: 54 HWLTCALYVSCRKSLVPTVGRGIMEG---NGVSLTRLLRSSKLSLIEFFKKMKKWL---- 106
Query: 133 PILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFF 174
++ E R + L+ NF +++ K YK I+ + F
Sbjct: 107 ----DMANLPEEFRSKVDRLERNFSVSTVIFKKYKPIFLDLF 144
>gi|71896991|ref|NP_001026501.1| retinoblastoma-like protein 2 [Gallus gallus]
gi|53135898|emb|CAG32467.1| hypothetical protein RCJMB04_26c5 [Gallus gallus]
Length = 470
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 218/524 (41%), Gaps = 97/524 (18%)
Query: 70 EEAERFWFAFVLYLVRRLSEKNGENLQQGSND-NEFNLCHILRVMKLNIVDFFKELPQFL 128
E E W A LY+ R K + +G+ + N +L ILR + ++++FF ++
Sbjct: 23 EGNELHWLACALYVACR---KAIPTVSRGTVEGNYVSLTRILRCSEQSLIEFFNKM---- 75
Query: 129 VKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAA 188
K ++N+ + R + L+ NF +++ K Y+ I+++ F + +Q
Sbjct: 76 -KKWEDMANLPS---QFRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQRGR 131
Query: 189 STSGY---ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFN 245
+++ +F W+LF +HA GL P F
Sbjct: 132 KQRRQPCTVTEVFQFCWVLF----VHA-----------KGL-----------PEDFH--- 162
Query: 246 IHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASECKS 304
S+ K S+ +I LCS++ + + I E I + KK + K
Sbjct: 163 ----SKDYKVSSDPPCIIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFDKKLLKG---KD 215
Query: 305 ENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED-DSLLG- 362
ENL +D + S + K Y+ + G LDER+F+ ED D +G
Sbjct: 216 ENLTG-----------FLDPGNFGDSFKAINKAYEEYVLSVGNLDERIFLGEDADEEIGT 264
Query: 363 --------SGSLSGGAVNIT-GAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATS 413
SG + V + ++ FD SP +T+PL+ G S
Sbjct: 265 LTRCLNTPSGMETAERVQVKHNLQQHFDRSKSP--RVTTPLT----------GRKYIKES 312
Query: 414 KMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFP 473
VTPVS A + L T++ L + PS LE+ ++C +D + + R + E
Sbjct: 313 NPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACSRDPSQSIASRVKEMYEVYCQ 372
Query: 474 SSGLGERCVTGSLQGANLMDNIWAEQ-RRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLL 532
S E + +NL ++ ++ RR E L YY+VLE++ E + L +L+++L
Sbjct: 373 SMQAEE-------EFSNLSKDVASKHFRRAEVL--YYKVLESVIEQERRRLGDTDLSAVL 423
Query: 533 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSK 576
+ FHR +LAC E+V T+K + FP + E I + K
Sbjct: 424 EQDVFHRSLLACCLEIVTFTYK-LPGSFPFITEIFDIPVYHFYK 466
>gi|196012646|ref|XP_002116185.1| hypothetical protein TRIADDRAFT_60210 [Trichoplax adhaerens]
gi|190581140|gb|EDV21218.1| hypothetical protein TRIADDRAFT_60210 [Trichoplax adhaerens]
Length = 820
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 44/302 (14%)
Query: 334 LEKDYDNATRNKGELDERVFINED--DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTIT 391
L ++Y+ A G+ DER F++E DS+L S G+ RK D +PVK
Sbjct: 259 LNREYEAAFIKNGDFDERAFLDESIFDSMLKPKSTGKED---RGSYRK-DPPPTPVK--- 311
Query: 392 SPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS 451
S +S A+ + KMV+T + L + P + L + K
Sbjct: 312 ---STMKSIANLLALLTSTEHLKMVIT------------YRIDFVLSTTPGSLLCDYFKK 356
Query: 452 CDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRV 511
C + ++ R LE + + + S +++ D + +RL Y+RV
Sbjct: 357 CCPNPFDSILAR----LER-YRDVFVQKYAKQTSSAYSSISDKYFDLAKRL-----YFRV 406
Query: 512 LEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKT----------VTMLFP 561
LE M E + L + + LL ++ FH +LACS E+VL T+ + FP
Sbjct: 407 LENMLKGEQRRLGNSDFSVLLNHDVFHSSLLACSLEVVLFTYNSPHTSNSNKYGYEFSFP 466
Query: 562 AVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV 621
+L+ I A+ KVIESFIR E SL L +HLN +E +LES+ W+ S +Y +L
Sbjct: 467 WILDILDIKAYHFGKVIESFIRSELSLDNNLVQHLNFIESMILESLAWQASSPLYAALES 526
Query: 622 AR 623
++
Sbjct: 527 SK 528
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 80/278 (28%)
Query: 725 SPTRPNPGGGGETCAET------GINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCL 778
SP + + ++C + +++F+ K+ +LA +R+ + + L++ ++ +
Sbjct: 554 SPVKKSHTSEKQSCGDETQKKLHSVDLFYRKVFQLAYLRLKNLCDALKIDEKTINRTWTC 613
Query: 779 FQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF 838
+ L +T LF +RHIDQ+ C+ + S
Sbjct: 614 YHYALTYKTKLFMDRHIDQV------------------------------CRNVLLLS-- 641
Query: 839 VDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGP 898
Q G II FYN+IF+ +K +++L A++ + + N
Sbjct: 642 ------NQYGT-------IIAFYNQIFICEMKEFVLKLSSVNAALQLSPIPTYNSR---- 684
Query: 899 CPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQ 958
SP+ D K++ NVY+SPL K +++ SK+ Y C G++ + +
Sbjct: 685 ---SPR-------SDGVGKRIPWVSNVYLSPL---KRKDILTPRSKALY-CFGDALESSR 730
Query: 959 SPSKDLTDINHR--LNSNRRVRGTLNFDDV----DVDV 990
S ++ +I H+ + S++R L FDD DVDV
Sbjct: 731 KLS-EINEIVHKGSMKSSKR----LKFDDTTVTADVDV 763
>gi|355715555|gb|AES05366.1| retinoblastoma 1 [Mustela putorius furo]
Length = 267
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 61/293 (20%)
Query: 579 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLAD 638
ESFI+ E +L RE+ +HL E R++ES+ W S +++ + A+ +R G
Sbjct: 1 ESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAK-------DREG---- 49
Query: 639 PMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTS 698
P L+ T +N P+ S H + +RSPK+ + R N T+
Sbjct: 50 PADHLEPACT-LNL------PLQS--NHTAADMYLSPVRSPKKKGSTIRV------NSTA 94
Query: 699 PVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRI 758
+ + SAF + + T +++F+ K+ +LA +R+
Sbjct: 95 NTEGQA---------------TSAFQT---------QKPLKSTSLSLFYKKVYRLAYLRL 130
Query: 759 NAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFR 817
N + RL ++ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+
Sbjct: 131 NTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFK 190
Query: 818 EIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVK 870
I+ Y+ P + F+ V + E+++ II FYN +F+ +K
Sbjct: 191 IIVTAYKDLPHAVQETFKRVLI----------REEEYDSIIVFYNSVFMQRLK 233
>gi|170065187|ref|XP_001867835.1| retinoblastoma-family protein [Culex quinquefasciatus]
gi|167882287|gb|EDS45670.1| retinoblastoma-family protein [Culex quinquefasciatus]
Length = 933
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 58/292 (19%)
Query: 722 AFASPTR-PNPGGG--GETCAETGINIFFCKINKLAAVRINAMVERLQL-SQQIRESVYC 777
F SP + P P G + + +N+FF K +AAVR+ + L L S ++ ++
Sbjct: 630 GFNSPLKLPVPNGSLSKQRPGASSLNLFFRKFYGVAAVRMKDLCNNLGLTSDDKQKQIWT 689
Query: 778 LFQQ-ILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRS 836
+F+ I++ L +RH+DQ+++C Y K+++L TF +I+ YR QPQ V+RS
Sbjct: 690 IFEHSIVHCTRELMRDRHLDQMLMCAIYVFVKVTKLPNTFTDIMKFYRIQPQSNSHVYRS 749
Query: 837 VFVDWAS-----ARQSGRSEQDHV------------------------DIITFYNKIFVP 867
VF+ + +Q+G +++D V DII FYNK++VP
Sbjct: 750 VFIARTTPADQQQQQNGETQRDEVTVTRGIAPIDLAGVSMQHGSEERGDIIMFYNKVYVP 809
Query: 868 AVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYV 927
++ + P G K + + P P +P SV SPK++ ++Y+
Sbjct: 810 LMQEFAI---PFGNGDKRSLML-------SPPPKTPSRSVM-----QSPKQIDGRISLYI 854
Query: 928 SPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRG 979
+P+ D S +S +Y +SP+KDL D+ +R+ N + G
Sbjct: 855 TPMDRKCADLKESPNSVTYL--------IDRSPAKDL-DVINRIVKNASITG 897
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 211/536 (39%), Gaps = 83/536 (15%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
N +L +LR+ +N+ +FF ++ Q++ + ENR LQ +F +
Sbjct: 36 NCVSLTRLLRLCGINLHEFFTKIGQWV--------EMASLPEENRTAINTLQHSFKVSMV 87
Query: 162 LSKSYKRIYREFFLPSDANGDKQSAAAS-TSGYISDYHRFGWLLFLALRIHAFSRFKDLV 220
+ + ++ F P + + K+S + + H F W LF+ + + D+V
Sbjct: 88 IYGKFCELFTLVFRPPNQDEQKRSKKSKPVPCSTNRLHEFCWTLFIYAKHEYPEQSADVV 147
Query: 221 TCTNGLVSILAILIIHVPVRFRNFNIHDSSR-FVKKSNKGV--DLIAS-------LCSIY 270
T N ++ L ++ + I D R V +G+ D IA LC I
Sbjct: 148 TSCNMMLCCLDLVYSNA--------IADGRRDIVNPDFEGLPADFIAEGRIPLEPLCIIE 199
Query: 271 DTSEDDLR-KIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSS 329
SE + + + NT+ D+++ N+ D + F L+ ++
Sbjct: 200 ALSEANCSSEALVTKNTIWKDVIET-------LFQTNVLRGDANS---FTGLISLANFDE 249
Query: 330 SLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKT 389
+ L YD + GE DER+ +L V K + D+
Sbjct: 250 NFKSLNSRYDTFILSCGEFDERI------------ALGQKIVENPRIKSERDAPERIPLC 297
Query: 390 ITSPLSPH-RSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERF 448
+PLS R S N TP+STA + LR + +P L
Sbjct: 298 QQTPLSGRSRISKDECNN---------KFTPISTANASVNKLRMKL-RYDGEPHGSLREL 347
Query: 449 LKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQR---RLEAL 505
LKSC +D V R E + + W ++ R + +
Sbjct: 348 LKSCAQDPIAIVTGRIAAEREKF----------------SKQMREQNWNQKSTTARFDMI 391
Query: 506 K-LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL 564
+ LYYR+LE + AE + + + E F++ +L C AE+V+ H + FP +L
Sbjct: 392 EALYYRLLENIIRAEIRRRGGNVIRQVCCEEMFNKTLLVCCAEIVIYAH-NLQQNFPWIL 450
Query: 565 ERTGITAFDLSKVIESFI-RHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ + F ++IE I H + L R+L +HL +EE+ LES+ W+ S ++ +
Sbjct: 451 KMFDMQPFIFYRIIEMVILYHNDLLSRDLIKHLTIIEEQCLESLSWQSSSPLWTVM 506
>gi|330800507|ref|XP_003288277.1| hypothetical protein DICPUDRAFT_97976 [Dictyostelium purpureum]
gi|325081682|gb|EGC35189.1| hypothetical protein DICPUDRAFT_97976 [Dictyostelium purpureum]
Length = 1110
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 196/501 (39%), Gaps = 66/501 (13%)
Query: 148 EAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQ----SAAASTSGYISDYHR---- 199
++K ++ +F L+ L + Y +I+ F P+++ KQ S AS S + R
Sbjct: 207 QSKVVKQSFSTLTDLYRKYDQIFFNLFHPTNSQILKQTQQDSGGASGSNDLGLTGRGPNN 266
Query: 200 -----------FGWLLFLALRIHAFSRF-KDLVTCTNGLVSILAILIIHVPVRFRNFNIH 247
GWL+FL + + F DLV L+ L + ++ R
Sbjct: 267 GIKSNEEYLFAIGWLMFLYYKNNLFKETCPDLVQSLYFLLCTLNYIYLNTTSDLRKI--- 323
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-----NTLIADILKKKPCEASEC 302
S+ V S + S D S +DL + + T ++LI D + K +
Sbjct: 324 PESQIVDPSTHDILPYLSKTLSKDCSYEDLLSVNKNTFSSFNDSLINDNILKSSNNINHY 383
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLG 362
EN N + + L + N L ++Y+ G++DER+F +D L
Sbjct: 384 SPENKNNNNNNNNNNNNFFNSPQILKDNFNSLNRNYEKFYYTNGDIDERLFFTDD--LYN 441
Query: 363 SGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVST 422
+ ++ G K+ T + TP ++
Sbjct: 442 NVIFFHPPRSVPGIKKN-----------------------------NQNTPRSAQTPTTS 472
Query: 423 AMTTAKWLRTVICPL-PSKPSAELERFLKSC---DKDVTTDVMRRAHIILEAIFPSSGLG 478
++ W++ I + PS L +K+ D+ + ILE+I
Sbjct: 473 TLSIESWIKNEIISFNKTYPSPRLIDIIKTINDEDQQQKDNNNNSQESILESIIFRVQEY 532
Query: 479 ERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFH 538
+ +N E+R+ A KLYY +LE E + + LL +E F+
Sbjct: 533 TDDTSRLFNDSNPTTKDIREKRKNIATKLYYSLLEKTIKKEQNISQIR---ILLNHEDFN 589
Query: 539 RCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNS 598
+ +L+ E++ +K + FP + I AF +VIES R + +LP+ L H S
Sbjct: 590 KSLLSSCFEIIAYAYKLEPLYFPYFINYFNIQAFSYCRVIESIFRADWNLPKLLANHFYS 649
Query: 599 LEERLLESMVWEKGSSMYNSL 619
+EE++LE VW+K S +++ L
Sbjct: 650 IEEKILEKYVWKKNSPVFSML 670
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS 847
L +R ID +++ Y + KI + N++FR+II Y +P+ VF + + +S S
Sbjct: 790 LLKDREIDVLLVSTVYVLCKIHNMKNISFRKIIDAYLPEPK----VFTKILIQDSSEESS 845
Query: 848 GRSEQDHVDIITFYNKIFVPAVKPLLVEL 876
+ ++ DII FYN IF+P + + E+
Sbjct: 846 ---QPEYGDIIKFYNNIFLPKINTSIYEI 871
>gi|195564497|ref|XP_002105853.1| GD16459 [Drosophila simulans]
gi|194203216|gb|EDX16792.1| GD16459 [Drosophila simulans]
Length = 845
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 32/248 (12%)
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQI 798
A + IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ
Sbjct: 578 AAGALQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETDLMKDRHLDQN 637
Query: 799 ILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDI 857
I+C Y ++ ++ + F +I+ YR QPQ V+R VF+D + G + + DI
Sbjct: 638 IMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFMD---INEDGEPKVN--DI 692
Query: 858 ITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPK 917
I FYN +VP ++ +++ T + R S++ ++S P PK
Sbjct: 693 IHFYNHAYVPLMRQFVIDYLNV-TPDASGRASDL------------QLSPHPKERAAQPK 739
Query: 918 KVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRV 977
KV+ +H+++VS + SK + S + Y C +SP+KDL +N ++ +R+
Sbjct: 740 KVTQSHSLFVSQM--SKNEIQQSPNQMVYSFC--------RSPAKDLQAMNEKVRGGKRM 789
Query: 978 RGTLNFDD 985
L+F D
Sbjct: 790 ---LSFGD 794
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 552
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 550
Query: 610 EKGSSMYNSLTVAR 623
+ S++++ + A+
Sbjct: 551 ARNSTVWDMIASAQ 564
>gi|270009799|gb|EFA06247.1| hypothetical protein TcasGA2_TC009105 [Tribolium castaneum]
Length = 872
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 178/416 (42%), Gaps = 54/416 (12%)
Query: 576 KVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA-RPVLSAEINRLG 634
K IES +++E S+ +L S+EE +L S+VW+ S ++ ++T + R V E L
Sbjct: 455 KFIESILQNERSIHADL-----SIEETILSSLVWKSDSLIWEAITSSDREVPKFEETALP 509
Query: 635 LLADPMPSLDAIATHINFSSGG---LSPVHSLHKHETSP-GQNGDIRSPKRPCTDYRSVL 690
PS + + +S +SP S SP + + P L
Sbjct: 510 GHMQNEPSSENLTLRSILNSEPRQIVSPGPSATDRFQSPVAHSSAVNRELFPTVQSGQSL 569
Query: 691 VERNNFTSPVKDR------LLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGIN 744
++ + +KDR + +N+ K P P+Q +P R G++
Sbjct: 570 LQTTHLM--IKDRTGNTRMIPIVNSETQKSTPVPVQQ--TTPQRQENVAQARPRRTGGVS 625
Query: 745 IFFCKINKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQ-RTSLFFNRHIDQIILCC 802
I F K L+ R+ + L+++ + ++ +F++++ + L +R++DQ+++C
Sbjct: 626 IVFRKFYNLSGERMEHLCTHLKITNTDTKRKIWTVFEELVRKNHCELMKDRNLDQLLMCA 685
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA----RQSGRSEQDHVDII 858
Y + K+++LN F EII +YR QPQ ++R+V + ++ ++ D+I
Sbjct: 686 VYMICKLTKLNKNFTEIIKSYRSQPQATSDIYRNVLISSKKVVVVDGETTEIPEEWGDLI 745
Query: 859 TFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKK 918
FYNK+ + A+K + G N G SP LP +
Sbjct: 746 QFYNKVIIQAMKKFAQKFVVRG------------EENIGDILLSP-------LPASRGQV 786
Query: 919 VSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSN 974
V N+++ PL + + Y++ +SPSKDL DIN + N
Sbjct: 787 VQVFDNIFIKPLESPTLTFGNGKVLNYYFS---------RSPSKDLKDINKAIRGN 833
>gi|194912087|ref|XP_001982431.1| GG12742 [Drosophila erecta]
gi|190648107|gb|EDV45400.1| GG12742 [Drosophila erecta]
Length = 843
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 118/245 (48%), Gaps = 32/245 (13%)
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
+ IF K+ L +RI + L LS++ E ++ +F+ + T L +RH+DQ I+C
Sbjct: 579 ALQIFLRKVYLLGWLRIQKLCMELSLSEETHEYIWHIFEHSITHETELMKDRHLDQNIMC 638
Query: 802 CFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
Y ++ ++ + F +I+ YR QPQ V+R VF+ + E + DII F
Sbjct: 639 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIGI-----NADGEPEVKDIIHF 693
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN +VP ++ ++ T + R+S++ ++S P PKKV+
Sbjct: 694 YNSTYVPVIRQFAIDYLNV-TPDVSGRISDL------------QLSPHPKERAAQPKKVT 740
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGT 980
H+++VS + SK + S + Y C +SP+KDL +N ++ +R+
Sbjct: 741 QNHSLFVSQM--SKNEIQQSPNQMVYSFC--------RSPAKDLQAMNEKVRGGKRM--- 787
Query: 981 LNFDD 985
L+F D
Sbjct: 788 LSFGD 792
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 136/567 (23%), Positives = 226/567 (39%), Gaps = 92/567 (16%)
Query: 76 WFAFVLYLVRRLSE----KNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
W LY+V R S + + + +G N +L ++LR ++I DF ++ Q+
Sbjct: 69 WLCCALYMVCRSSSIPTVDSKDAVVRG---NGVSLNNLLRCGHMSIYDFMTKIKQWCD-- 123
Query: 132 GPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL--PSD---ANGDKQSA 186
++N+ + N +E L+ F L K Y+ I+ + F P++ N +
Sbjct: 124 ---MANL-PQQFVNEIET--LERKFGITFTLYKRYRTIFDKIFSCPPNEKKHCNSRHGNH 177
Query: 187 AASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNI 246
A YI H WLLFL + S DLVT N ++ + ++ +V R I
Sbjct: 178 AHGKCSYIK-LHDICWLLFLCAKNQKPSHTVDLVTSFNLMICCIDLIYNNVLAEKRTDLI 236
Query: 247 HDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSEN 306
+ + + +D I D D + E+ + A ++ + +
Sbjct: 237 NSKFEGLPSNWTELDFRHKPHCILDYFCD----MTEEAKAMKATTFRQIMSSFFQASTIY 292
Query: 307 LENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSL 366
+ GL+ ENL + SLNI Y+ + GE DER+ +
Sbjct: 293 GKKDTMLGLLANENLERNLK---SLNI---SYEQYVLSVGEFDERIL----------SAY 336
Query: 367 SGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTT 426
G + + SL PV +PL+ + + P +AG PV A
Sbjct: 337 DAGEHTVLNDQ----SLRPPV----TPLTRKQDLPAQP-AMAGDK-----FEPVRNATNN 382
Query: 427 AKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILE---AIFPSSGLGERCVT 483
K L + E F+K ++V ++ + + A +PS+
Sbjct: 383 VKQL------IAFGRITEPTDFVKQAGEEVIAKLLSIIEDMKQNFLAKYPSTE------- 429
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN----ERFHR 539
A R A Y+ +L + AE +L LL + F+
Sbjct: 430 -------------ARSRFRLAKSFYFYLLNQILQAEIHNKPDIDLKRLLVQKISLDIFNI 476
Query: 540 CMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHL 596
++AC ELVL +KT + FP VLE I+AF+ K+IE +RH E L R L +HL
Sbjct: 477 TLMACCVELVLEAYKT-ELKFPWVLECFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHL 535
Query: 597 NSLEERLLESMVWEKGSSMYNSLTVAR 623
NS+EE LE M W + S++++ + A+
Sbjct: 536 NSIEETCLERMAWARNSTVWSMIASAQ 562
>gi|24638969|ref|NP_525036.2| Retinoblastoma-family protein [Drosophila melanogaster]
gi|85702751|sp|Q24472.2|RBF_DROME RecName: Full=Retinoblastoma family protein
gi|3702398|emb|CAA20903.1| EG:34F3.3 [Drosophila melanogaster]
gi|7290085|gb|AAF45551.1| Retinoblastoma-family protein [Drosophila melanogaster]
gi|19528311|gb|AAL90270.1| LD02906p [Drosophila melanogaster]
Length = 845
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQNIMCA 641
Query: 803 FYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
Y ++ ++ + F +I+ YR QPQ V+R VF+D + G E DII FY
Sbjct: 642 IYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFID---INEDG--EPKVKDIIHFY 696
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +VP ++ +++ T + R S++ ++S P PKKV+
Sbjct: 697 NHTYVPLMRQFVIDYLNV-TPDVSGRASDL------------QLSPHPKERAAQPKKVTQ 743
Query: 922 THNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
+H+++VS + SK + S + Y C +SP+KDL +N ++ +R+ L
Sbjct: 744 SHSLFVSQM--SKNEIQQSPNQMVYSFC--------RSPAKDLQAMNEKVRGGKRM---L 790
Query: 982 NFDD 985
+F D
Sbjct: 791 SFGD 794
Score = 69.7 bits (169), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 552
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 550
Query: 610 EKGSSMYNSLTVAR 623
+ S+++ + A+
Sbjct: 551 ARNSTVWEMIASAQ 564
>gi|15010466|gb|AAK77281.1| GH05946p [Drosophila melanogaster]
Length = 722
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ I+C
Sbjct: 459 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQNIMCA 518
Query: 803 FYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
Y ++ ++ + F +I+ YR QPQ V+R VF+D + G E DII FY
Sbjct: 519 IYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFID---INEDG--EPKVKDIIHFY 573
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +VP ++ +++ T + R S++ ++S P PKKV+
Sbjct: 574 NHTYVPLMRQFVIDYLNV-TPDVSGRASDL------------QLSPHPKERAAQPKKVTQ 620
Query: 922 THNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
+H+++VS + SK + S + Y C +SP+KDL +N ++ +R+ L
Sbjct: 621 SHSLFVSQM--SKNEIQQSPNQMVYSFC--------RSPAKDLQAMNEKVRGGKRM---L 667
Query: 982 NFDD 985
+F D
Sbjct: 668 SFGD 671
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 552
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 309 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 368
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 369 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 427
Query: 610 EKGSSMYNSLTVAR 623
+ S+++ + A+
Sbjct: 428 ARNSTVWEMIASAQ 441
>gi|1403032|emb|CAA65661.1| RBF [Drosophila melanogaster]
Length = 797
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 32/244 (13%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ I+C
Sbjct: 582 LQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETELMKDRHLDQNIMCA 641
Query: 803 FYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
Y ++ ++ + F +I+ YR QPQ V+R VF+D + G E DII FY
Sbjct: 642 IYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFID---INEDG--EPKVKDIIHFY 696
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSA 921
N +VP ++ +++ T + R S++ ++S P PKKV+
Sbjct: 697 NHTYVPLMRQFVIDYLNV-TPDVSGRASDL------------QLSPHPKERAAQPKKVTQ 743
Query: 922 THNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
+H+++VS + +++ + S+ ++SP+KDL +N ++ +R+ L
Sbjct: 744 SHSLFVSQMSKNEIQQSPNQMVYSF----------FRSPAKDLQAMNEKVRGGKRM---L 790
Query: 982 NFDD 985
+F D
Sbjct: 791 SFGD 794
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 552
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 550
Query: 610 EKGSSMYNSLTVAR 623
+ S+++ + A+
Sbjct: 551 ARNSTVWEMIASAQ 564
>gi|355715603|gb|AES05380.1| retinoblastoma-like 1 [Mustela putorius furo]
Length = 266
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 55/243 (22%)
Query: 757 RINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTF 816
R+ + +L +S ++R ++ F+ L L +RH+DQ++LC FY +AK+++ TF
Sbjct: 1 RLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTF 60
Query: 817 REIIYNYRKQPQCKPQVFRSVFV-----------------------DWASARQ-----SG 848
+EI+ +YR QPQ V+RSV + D A + SG
Sbjct: 61 QEIMKSYRNQPQANSHVYRSVLLKSIPREVVAYNRNVNGDFEMTDCDLEDATKTPDCSSG 120
Query: 849 RSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVF 908
+++ D+I FYN I+V VK A+K + +S +H + P P SP F
Sbjct: 121 PVKEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHVMEAP-PLSP----F 165
Query: 909 PALPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTD 966
P + SP+++S H+VYVSP K + ++ S Y G SPSK L D
Sbjct: 166 PRIKQQPGSPRRISQQHSVYVSP---HKNGSGLTPRSALLYRFNG-------SPSKSLKD 215
Query: 967 INH 969
IN+
Sbjct: 216 INN 218
>gi|335308327|ref|XP_003361185.1| PREDICTED: retinoblastoma-like protein 2, partial [Sus scrofa]
Length = 480
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 58/271 (21%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 175 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 234
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 235 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 294
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAM---------------- 883
R+ +D ++ + + VP + P L A + M
Sbjct: 295 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNSIY 354
Query: 884 ----KTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDA 937
KT + N D P P SP +P + SP+++ S H VY+SP K +A
Sbjct: 355 IKQIKTFALKYSQANMDAP-PLSP----YPFIRSGSPRRIQLSQNHPVYISP---HKSEA 406
Query: 938 LISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
++S K +Y + SPSK L +IN
Sbjct: 407 MLSPREKIFY-------YFSNSPSKRLREIN 430
>gi|426375443|ref|XP_004054548.1| PREDICTED: retinoblastoma-associated protein-like, partial [Gorilla
gorilla gorilla]
Length = 325
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 40/222 (18%)
Query: 724 ASPTRPNPGGGGETCA-----------ETGINIFFCKINKLAAVRINAMVERLQLSQ--Q 770
S TR N ET A T +++F+ K+ +LA +R+N + ERL LS+ +
Sbjct: 55 GSTTRVNSTANAETQATSAFQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCERL-LSEHPE 113
Query: 771 IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCK 830
+ ++ LFQ L L +RH+DQI++C YG+ K+ ++L F+ I+ Y+ P
Sbjct: 114 LEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAV 173
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
+ F+ V + E+++ II FYN +F+ +K +++ + + +S
Sbjct: 174 QETFKRVLI----------KEEEYDSIIVFYNSVFMQRLKTNILQYA----STRPPTLSP 219
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRT 932
+ H P SP FP+ SP ++ N+Y+SPL++
Sbjct: 220 IPH-----IPRSP--YKFPS----SPLRIPGG-NIYISPLKS 249
>gi|452823564|gb|EME30573.1| retinoblastoma-associated protein [Galdieria sulphuraria]
Length = 884
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 410 GATSKMVVTPVSTAMTTAKWLRTVICPLPS----------KPSAELERFLKSCDKDVTTD 459
G ++K+ ++ +++++T KWLR + P + S L+RF C + +
Sbjct: 352 GDSTKLDISAITSSLTATKWLRDITRMRPEVSFEQKEDDIESSTNLKRFCDLCGLNTYNN 411
Query: 460 VMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE 519
V+ A I+ + F + G ++ E+R+ E + LY VLE + E
Sbjct: 412 VIDTAFNIVFSFFKKN---------PWYGNEIL-----EERKKEIIGLYLHVLEKVLLTE 457
Query: 520 AQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT-MLFPAVLERTGITAFDLSKVI 578
+ LH +N SLL NE HR ++ACS LA + LF +VL I+ F+ +K I
Sbjct: 458 ERRLHRQNFGSLLANEYLHRSLIACSIVASLACYGCQDRYLFISVLRGVDISPFEYTKSI 517
Query: 579 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 613
SF+ E +PR +++ L +EE +ES+ W+ S
Sbjct: 518 GSFVTSIEDIPRSVQKFLVKIEEISVESICWQDSS 552
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 745 IFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFY 804
+FF K+ ++A ++ R+++S E V+ L + +L NRH+D I++C Y
Sbjct: 596 VFFRKLLRIAREKVRDFCLRMEVSDVFEELVFITVNYALTRHFNLLVNRHVDVIVMCALY 655
Query: 805 GVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKI 864
V+KI++ L F +I YR Q K + + + G + DII FYN+
Sbjct: 656 AVSKITKEQLKFNDIAAFYRDIFQRKANHLFDIEENLSRVYLEG---HHYGDIIEFYNRD 712
Query: 865 FVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHN 924
F+ + L+E A + S+ N N G P +P S L + + S + +
Sbjct: 713 FIKHFRNFLLEHLKAIFEERMKARSDKNEKNQGE-PSTPVRS----LHSKTGQSPSGSDS 767
Query: 925 VYVSP---LRTS 933
V+ +P +RTS
Sbjct: 768 VFYTPSPSVRTS 779
>gi|358339643|dbj|GAA47664.1| retinoblastoma-like, partial [Clonorchis sinensis]
Length = 1048
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 34/255 (13%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IFF ++A+ R+ + ERL L + I ++ F+ + L +R +DQI+LC
Sbjct: 747 LAIFFRHFYRVASARLRDICERLNLQRDILVKIWTGFELCVVHEVELLRDRCLDQILLCS 806
Query: 803 FYGVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
+GV K+ L+F +I+ YR QPQ ++R V ++ + S S ++ DI FY
Sbjct: 807 LFGVCKLVLYRPLSFVDIVQVYRMQPQSNRDIYRRVLLNRVTYGHS--SGEERGDITRFY 864
Query: 862 NKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFP-----ALP---- 912
N +F+ +K L + A + +T+ N G G P ++ P A+P
Sbjct: 865 NTVFLMRMKDFLQKAASATSTDRTSAADVTPWPNAGRWMGPPSLAPLPIQKSNAIPAGTG 924
Query: 913 ----------DMS-PKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPS 961
D++ +++++ NV++SP++ ++ S K VG ST
Sbjct: 925 FGGTASAGPIDITQARRLASNRNVFISPVKHQ-----VNLSPKRVVFTVGRST------G 973
Query: 962 KDLTDINHRLNSNRR 976
KDL D+N ++S R
Sbjct: 974 KDLQDVNVMISSAER 988
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 123/554 (22%), Positives = 228/554 (41%), Gaps = 63/554 (11%)
Query: 105 NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSK 164
+L +L K+++V FF + ++ + + D +R+E E Q F S++ +
Sbjct: 42 SLARLLSAAKMSMVQFFHRIKKWADMTDMV------DDMRDRVELLERQ--FAVSSVIFR 93
Query: 165 SYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTN 224
++ R + F + QS T +D R WLLF+ R + DLV +
Sbjct: 94 NFGRSFGVLFRETSY---IQSQMHPTG---TDLFRLTWLLFIKSRTSFPAVTDDLVNSYH 147
Query: 225 GLVSILAILIIHVPVRFRNFNIH-DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIME- 282
LV L ++ V V R+ I+ + + K + C D LR I E
Sbjct: 148 LLVCCLDWVLGAVMVSGRHDLINVEMNGLPKDFLNAIGQNKPWCPPGDEPPCMLRPICED 207
Query: 283 -KTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNA 341
+ N + +K+ + + E I + ++Y +L++ + +L L Y+
Sbjct: 208 NEVNYVECKTVKEHFFRSFIMRLIEKETIKLEPMVY-GSLLESGNFDITLQNLNNSYEEY 266
Query: 342 TRNKGELDERVFINEDDSL-LGSGSLSGGAVNIT-------GAKRKFDSLASPVKTITSP 393
G+ DER++++ + +GS SG N+ A+R ++ TS
Sbjct: 267 IIGTGDFDERIYLSPSAAEEIGSAGDSGIHSNLNLPSDLAPSARRYM------LEVSTSG 320
Query: 394 LSPHRSSASHPNGIAGGATSKM-----VVTPVSTAMTTAKWLRTVICPLPSKPSAELERF 448
+ N AG A S++ P + ++ L+ ++ +PS L
Sbjct: 321 FGGFTETTRRGNANAG-AVSRLNGGVNFNNPEARNQNLSQ-LQILLSGRSKEPSEALVDL 378
Query: 449 LKS-CDKDVTTDVMRRAHIIL---EAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEA 504
++S C + D+ ++ + ++ S V+ +N++ A+QR
Sbjct: 379 VESHCTMSLLEDMRTTLDGLVNEFQRVYAGSPDTNPVVSSGSAESNMLAISAAQQRLHLG 438
Query: 505 LKLYYRVLEAMCTAEAQVLHAK-------------------NLTSLLTNERFHRCMLACS 545
LYY VLE + E + + + NLT+LL+ E FHR + AC
Sbjct: 439 CILYYLVLENILVDEIRKIEKRLTSSTSVVDDAALARRMKPNLTTLLSQELFHRSLFACC 498
Query: 546 AELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLE 605
ELVL + FP +LE + + + KVIE +R + PR++ +++N + E +L+
Sbjct: 499 MELVLISSDAPEHHFPWILEALSLDSLNFFKVIEVVVRSID-FPRDMVKYMNQVAELILD 557
Query: 606 SMVWEKGSSMYNSL 619
S W S +++ L
Sbjct: 558 SYAWRASSPLWSML 571
>gi|195469581|ref|XP_002099715.1| GE16567 [Drosophila yakuba]
gi|194187239|gb|EDX00823.1| GE16567 [Drosophila yakuba]
Length = 635
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
+ IF K+ L +RI + L L ++ E ++ +F+ + T L +RH+DQ I+C
Sbjct: 364 ALQIFLRKVYLLGWLRIQKLCSELSLCEKTPECIWHIFEHSITHETDLMKDRHLDQNIMC 423
Query: 802 CFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
Y ++ ++ + F +I+ YR QPQ V+R VF+ + E DII F
Sbjct: 424 AIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFIG-----DNEDGEPKVKDIIHF 478
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN +VP ++ ++ T + R+S++ ++S P PKKV+
Sbjct: 479 YNNTYVPVIRQFAIDYLNV-TPDVSGRISDL------------QLSPHPKERTAQPKKVT 525
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGT 980
+H+++VS + +++ S + Y C +SP+KDL +N ++ +R+
Sbjct: 526 QSHSLFVSQMPKNEIQQ--SPNQMVYSFC--------RSPAKDLQAMNEKVRGGKRM--- 572
Query: 981 LNFDD 985
L+F D
Sbjct: 573 LSFGD 577
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN----ERFHRCMLACSAELVLAT 552
A R A Y+ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 215 ARSRFRLAKSFYFYLLDQILQAEIRNKPDIDLKRLLVQKISLDIFNITLMACCVELVLEA 274
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 275 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 333
Query: 610 EKGSSMYNSL 619
+ S++++ +
Sbjct: 334 ARNSTVWDMI 343
>gi|47196291|emb|CAG13684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 318
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+++FF K+ LA+VR+ + +L +S ++R ++ F+ L T L +RH+DQ+++C
Sbjct: 60 LSLFFRKVYHLASVRLRDLCAKLDISAELRRKIWTCFEYSLVHCTDLMMDRHLDQLLMCA 119
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQD--------- 853
Y ++K+++ + +F+ I+ YR QPQ V+R V + QSG S+
Sbjct: 120 VYIMSKVTKEDRSFQNIMKCYRTQPQAGSSVYRCVLISGRRKHQSGSSDTKNDGPAEPSL 179
Query: 854 ---HVDI--ITFYNKIFVPAVKP-------------LLVELGPAGTAMKTNRVSEVNH-- 893
H D+ + + +P +P L P G A ++ H
Sbjct: 180 DPAHGDVSPVPVRSSSTLPTSQPGSAPSTPTNASTKALSSSSPGGEAEGQEERGDLIHFY 239
Query: 894 -----------------NNDGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSK 934
++ P SP + +P L SP+++ S+ H++Y+SP +T
Sbjct: 240 NHLYVKQMRGFALRYSTSSLAPAVDSPPLCPYPTLRTGSPRRMLLSSKHSIYISPHKTGS 299
Query: 935 MDALISHSSKSYY 947
+ S K YY
Sbjct: 300 APSASSPRDKIYY 312
>gi|405964992|gb|EKC30423.1| Retinoblastoma-like protein 1 [Crassostrea gigas]
Length = 1073
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 417 VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG 476
TPVSTA + L+T++ + PS +L L D T +M R + E IF +
Sbjct: 497 TTPVSTATQSVSKLQTLLLGRKALPSDDLLDILSEIGTDPKTRIMERVTEMGE-IFCAHY 555
Query: 477 LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKN----LTSLL 532
+ E T G+ + +A++R LYY++LE++ E + +K L +L+
Sbjct: 556 VKE---TDDHAGSQI---DFAKKRLQLGECLYYKLLESILYTEKKRNDSKEGKAALATLM 609
Query: 533 TNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPREL 592
+ FHR + AC E+V+ ++ + FP ++E ++ + KVIE IR EE R++
Sbjct: 610 EQDIFHRTLFACCLEIVIFSYNS-QRSFPWIVEIFNLSPYHFYKVIEIIIRTEEGFSRDV 668
Query: 593 RRHLNSLEERLLESMVWEKGSSMYNSL 619
+HLN +EE +LES+ W+ S +++++
Sbjct: 669 VKHLNHIEESILESLAWKSESPLWDAI 695
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 156/365 (42%), Gaps = 47/365 (12%)
Query: 21 NDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFV 80
+DA E R +LC + L++D+ T +E + +++ K + G+ M W A
Sbjct: 8 DDAVERRYNELCLD-LNMDKGTKEEAWESYQKIK----TKYTLEGDQM------HWLACA 56
Query: 81 LYLVRR--LSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNI 138
LY R ++ G +G N +L +LR K +++ FF ++ ++ S++
Sbjct: 57 LYEACRKSVTPTVGRGTMEG---NGVSLTRLLRSAKFSLIQFFNKMKKW--------SDM 105
Query: 139 YGADWENRLEAKELQANFVHLSILSKSYKRIYREFFL-PSDANGDKQSAAASTSGY---I 194
G E + +L+ NF +++ K ++ I+ + F P+D++ +KQ+
Sbjct: 106 AGLPQEFIDKVNKLERNFAVSTVIFKKFEPIFSDIFQHPTDSHQNKQNRNKKQRRMPCTS 165
Query: 195 SDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDS----- 249
++ F W +F+ ++ H + DLV + L+ L + + R ++ S
Sbjct: 166 TEVFNFCWTMFIQVKGHFPAISDDLVNSYHLLLCCLDWFYANALMGGRKDLLNPSFEGLP 225
Query: 250 ----SRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK------TNTLIADILKKKPCEA 299
+R K + LI LC ++ E + + I E ILK KP
Sbjct: 226 EDFGNRDWKPPTESPCLIKYLCDKHEGLEIEAKVIKEHWWKPHIKKLFDKKILKGKPDTL 285
Query: 300 SECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFI-NEDD 358
S + N D + E +D L+ S + +Y+ + G+ DERVF+ +E D
Sbjct: 286 SAVL--EVGNFDANKKSINE-AYEDYPLNYSSKSMNSEYEAYVLSVGDFDERVFLGSEAD 342
Query: 359 SLLGS 363
+G+
Sbjct: 343 EEIGT 347
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 41/161 (25%)
Query: 836 SVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNN 895
++ V A+ + G ++ D+I FYN++FV VK + S ++
Sbjct: 903 TILVHSATGSEEG---EERGDLIMFYNRVFVEKVKKF------------AQKFSAQKNSK 947
Query: 896 DGPCPGSPKVSVFPALPDMS--PKKVSATHNVYVSP----LRTSKMDALISHSSKSYYAC 949
D P P SP P + S P++VS+ H++Y+SP L + M +S+S +
Sbjct: 948 DIP-PLSP----LPVVKSQSASPRRVSSKHSIYLSPHKPTLHATPMATGLSYSFQ----- 997
Query: 950 VGESTHAYQSPSKDLTDINH--RLNSNRRVRGTLNFDDVDV 988
+SP+KDL IN+ ++ R + L +DV
Sbjct: 998 --------KSPAKDLRAINNMIKMKDFREGKKLLGKRQLDV 1030
>gi|444725591|gb|ELW66152.1| Retinoblastoma-like protein 2 [Tupaia chinensis]
Length = 1056
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 42/246 (17%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 768 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 827
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ-SGRSEQDHVDIIT 859
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R+ S S++ H + T
Sbjct: 828 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSASSDRSHQNSPT 887
Query: 860 FYNK-----------------IFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
NK + VP + P L A + M+ ++ +NN
Sbjct: 888 ELNKDRTASRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 947
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K +A++S
Sbjct: 948 IKQIQTFAMKYSQANVMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNEAMLSP 1004
Query: 942 SSKSYY 947
K +Y
Sbjct: 1005 REKIFY 1010
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 177/448 (39%), Gaps = 103/448 (22%)
Query: 194 ISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIH----------VPVRFRN 243
+S+ F W+LF+ + + DLV + L+ L ++ + V FR
Sbjct: 178 VSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFRG 237
Query: 244 FNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEK-TNTLIADILKKKPCEASEC 302
+ ++ K ++ +I LCS++D + + I E I + +KK + E
Sbjct: 238 LSEDFHAKDSKPASDPPCVIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE- 296
Query: 303 KSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL-- 360
ENL ++ + S + K Y+ + G LDER+F+ ED
Sbjct: 297 --ENLTG-----------FLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEI 343
Query: 361 --------LGSGSLSGGAVNITGA-KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGA 411
GSG+ + V + ++ FD S I++PL+ G+
Sbjct: 344 GTLSRCLNTGSGTETAERVQMKNILQQHFDK--SKALRISTPLT----------GVRYVK 391
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
+ VTPVSTA + L T++ L + PS +LE+ L++C +D T + R + E
Sbjct: 392 ENSPCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCSRDPTQTIANRLKEMYEIY 451
Query: 472 FPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSL 531
S E N I ++ R + LYY+VLE++ E + L +L+
Sbjct: 452 SQHSQSDE-------DFNNSSKEIASKHFRFAEM-LYYKVLESVIEQEQKRLGDMDLS-- 501
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRE 591
VIE FIR E+ L RE
Sbjct: 502 ---------------------------------------------VIEVFIRAEDGLCRE 516
Query: 592 LRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ +HLN +EE++L+ + W+ S +++ +
Sbjct: 517 VVKHLNQIEEQILDHLAWKPESPLWDRI 544
>gi|195394071|ref|XP_002055669.1| GJ19490 [Drosophila virilis]
gi|194150179|gb|EDW65870.1| GJ19490 [Drosophila virilis]
Length = 815
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 45/267 (16%)
Query: 730 NPGGGGETCAETG-------INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQI 782
N G TC E + IF K+ L +RI + L+L ++ E ++ +F+
Sbjct: 552 NTGKPLPTCTEVNEDRAAGPLQIFLRKVYLLGWLRIGKLCSELKLGEKKPEKIWTIFEHS 611
Query: 783 LNQRTSLFFNRHIDQIILCCFYGVAKISQLNLT-FREIIYNYRKQPQCKPQVFRSVFVDW 841
+ +T L +RH+DQII+C Y +++++ T F +I+ YR QPQ V+R V +
Sbjct: 612 ITHKTHLMQDRHLDQIIMCAIYIYIRVTKMEETKFSDIMRAYRNQPQAVNSVYREVLIS- 670
Query: 842 ASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPG 901
E+ + DII FYN +VP + +N+ ++
Sbjct: 671 -----VNEGERKYKDIIHFYNYTYVPEMTKFC-----------------INYLDESADNV 708
Query: 902 SPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPS 961
+ +S P M PKK+ H++YV+ + ++ I S + SP+
Sbjct: 709 NLLMSPHPIERTMLPKKLIHNHSLYVTQMSKNE----IQQSPDQVVYIIS------ASPA 758
Query: 962 KDLTDINH-RLNSNRRVRGTLNFDDVD 987
K L D+N L S +RV L+F D D
Sbjct: 759 KKLDDMNKIVLGSGKRV---LDFTDDD 782
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 148/658 (22%), Positives = 253/658 (38%), Gaps = 151/658 (22%)
Query: 2 DDTKPSVTASNNSESNAGDNDATE---ARLTDLCKNGLSVDENTYKEIIKLFRETKHLLL 58
D + V A + + A +D E + +LC++ L++D T E ++ E +
Sbjct: 4 DVQEQEVGAEVVTSAGAPVDDGLETMRCKFENLCRD-LNMDRQTEVEAFRMLNEVQE--- 59
Query: 59 ANISAIGNGMPEEAERFWFAFVLYLVRRLSEK---NGENLQQGSNDNEFNLCHILRVMKL 115
+ S G+ M WF L+ R S G++ N N ++LR +
Sbjct: 60 -HCSLEGDNM------HWFCCALFAACRQSTTPTVGGQDAVVMGNCVPLN--NLLRSCHM 110
Query: 116 NIVDFFKE---------LPQFLVKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSY 166
+I +F ++ LPQ V+ + +EL+ F + K Y
Sbjct: 111 SIYEFKQKIKLWCDMANLPQVFVQ-----------------QMEELERKFSITFTIYKRY 153
Query: 167 KRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGL 226
+ I+ + F+ N K S + Y S W LFL + +R DLVT N +
Sbjct: 154 RNIFEQLFI-CPPNEKKHSRNSPKCTY-SKLDNISWRLFLCAKNQKPTRTLDLVTTFNLM 211
Query: 227 VSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNT 286
+ L ++ +V R + + + KG + + D E RK
Sbjct: 212 ICCLDLIYANVLAEKR-------TDLINPNFKG---LPPNWNTPDFDETQARK------H 255
Query: 287 LIADILKKKPCEASECKSENLENI-----DTDGLIYFEN----LMDDSSLSSSLNILEKD 337
I D +A E K++ I T+ ++ E+ L+ +++ +L L
Sbjct: 256 CILDFFCDMKADAKEIKAKGFIEIIHSFFQTNTIVGNEDTLLGLVANNNFERNLKSLNLS 315
Query: 338 YDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPH 397
Y+ + GE DERV +L+ A L PV +PL+
Sbjct: 316 YEQYVLSVGEFDERVLAAYQLDASDHSNLNEQA------------LRQPV----TPLTRK 359
Query: 398 RSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVT 457
+ + P ++ PV+ A K K SA + R +
Sbjct: 360 QELPAQP----------VMSEPVANATNNVK-----------KLSASISRITEP------ 392
Query: 458 TDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW---------AEQRRLEALKLY 508
TD +++A GE + ++ M+ + AE R A LY
Sbjct: 393 TDFVKQA-------------GEAALAKMMKTIEQMELKFLAKYPIRSEAENRFRMAKSLY 439
Query: 509 YRVLEAMCTAEA----QVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVL 564
Y +++ + AE Q++H +L + F+ ++AC ELVL + T + FP +L
Sbjct: 440 YYLMDHILRAEIKNKPQIVHKISL------DIFNETLMACCLELVLEAYIT-ELKFPWIL 492
Query: 565 ERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
+ I AF+ K+IE +RH E L R L +HLNS+EE LE + W+ S ++ +
Sbjct: 493 DCFSINAFEFHKIIEIVVRHGSREGCLTRSLVKHLNSIEETCLERLAWQLISPVWEMI 550
>gi|195432212|ref|XP_002064120.1| GK19998 [Drosophila willistoni]
gi|194160205|gb|EDW75106.1| GK19998 [Drosophila willistoni]
Length = 833
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 38/257 (14%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETG--INIFFCKINKLAAVRINAMVERLQLSQQIRESV 775
P+ AS +P P +T + IF K+ L +RI + L LS E V
Sbjct: 580 PVWEMIASAVKPLPTSLDVNRDQTAGALQIFLRKVYLLGWLRIQKLCSELNLSNPTPEKV 639
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVF 834
+ +F+ + Q T L +RH+DQII+C Y +++++ F +I+ YR QPQ V+
Sbjct: 640 WHIFEHSIAQETGLMQDRHLDQIIMCAIYIYIRVTKMAEPKFIDIMRAYRNQPQAVNNVY 699
Query: 835 RSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
R V + + G E + DII FYNK +V MK +S ++
Sbjct: 700 REVLI-----LEGG--ETKYKDIIYFYNKHYV--------------DRMKQFSISYLDRT 738
Query: 895 NDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGEST 954
D P +S P PKK++ H VY++ ++ K + L+S ++ Y
Sbjct: 739 VD---PADLLLSPHPTERPALPKKLTQNH-VYITQMQ--KNETLVSDNNMIY-------- 784
Query: 955 HAYQSPSKDLTDINHRL 971
Y+SP KDL +N ++
Sbjct: 785 EFYRSPGKDLERMNEKV 801
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 149/630 (23%), Positives = 248/630 (39%), Gaps = 101/630 (16%)
Query: 24 TEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYL 83
T A +LC+ L++D T ++ K F+E + S G+ R W LY+
Sbjct: 51 TRAIYENLCRE-LNMDRQTEEDGYKTFQE----VCQRCSLEGDV------RHWLCCCLYM 99
Query: 84 VRR---LSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYG 140
R + NGE+ N N ++LR +++I DF ++ Q+ ++N+
Sbjct: 100 ACRKFSMPTVNGEDAVVRGNGVSLN--NLLRCCQISIYDFKTKIKQWCD-----MANL-S 151
Query: 141 ADWENRLEAKELQANFVHLSILSKSYKRIYREFFL--PSDANGDKQSA--AASTSGYISD 196
D +N +E + F L K+Y+ I+ FL P++ K S+ A TS
Sbjct: 152 PDCKNLIEI--VDRKFSITFTLYKNYRVIFETIFLCPPNEKKHSKYSSLHANHTSHGRCS 209
Query: 197 YHRFG---WLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFV 253
Y + W LFL + + DLVT N ++ + ++ +V R+ I+ +
Sbjct: 210 YIKLDDICWRLFLCAKNQKPATTVDLVTSYNLMICCIDLIYANVLAEKRSDLINPDFEGL 269
Query: 254 KKSNKGVDLIA--SLCSIYDTSEDDLRKIMEKT--NTLIADILKKKPCEASECKSENLEN 309
+ D A + +Y K M++T +IA + K N
Sbjct: 270 PSNWNSPDFRARDNCILVYFCEMSVEAKAMKETLFPKIIASFFQAKTIYG---------N 320
Query: 310 IDTD-GLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSG 368
DT GL+ EN + SLNI Y+ + GELDER+ S +
Sbjct: 321 KDTMLGLLARENCERNLR---SLNI---SYEQYVLSVGELDERIL---------SAYDAN 365
Query: 369 GAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAK 428
N+ +L PV +PL+ + SH S V A K
Sbjct: 366 EHTNLNE-----QALKPPV----TPLTRKQDLPSHTTA------SDQKFEAVKNATKNVK 410
Query: 429 WLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLG-ERCVTGSLQ 487
L L E F+K DV +++ + + G +R
Sbjct: 411 QL------LAFSGIKEPTDFVKQAGDDVVAKLVQSIKQMKQKFLAKYPEGIDRFELAECN 464
Query: 488 GANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAE 547
L+D+I + + K ++ + L ++ F+ ++AC E
Sbjct: 465 FYYLLDHILRAETEQKINK-------------PKIDLKRQLVQKVSLSIFNVTLMACCVE 511
Query: 548 LVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEES---LPRELRRHLNSLEERLL 604
LVLA ++T FP + + I+AFD K+IE +RH L R +HLNS+EE L
Sbjct: 512 LVLAAYET-EWKFPWINDCFSISAFDFQKIIEIVVRHGSRVGFLNRSQIKHLNSIEETCL 570
Query: 605 ESMVWEKGSSMYNSLTVA-RPV-LSAEINR 632
E + W + S ++ + A +P+ S ++NR
Sbjct: 571 ERLAWSRTSPVWEMIASAVKPLPTSLDVNR 600
>gi|349605539|gb|AEQ00742.1| Retinoblastoma-like protein 2-like protein, partial [Equus
caballus]
Length = 481
Score = 87.4 bits (215), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 49/267 (18%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ +++FF K+ LA VR+ + +L +S ++R+ ++ F+ + Q L +RH+DQ+++
Sbjct: 175 SSLSLFFRKVYHLAGVRLRDLCAKLDISDELRKKIWTCFEFSIIQCPELMMDRHLDQLLM 234
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG------------ 848
C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 235 CAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSP 294
Query: 849 ------RSEQDHVDIITFYNKIFVP---AVKPLLVELGPAGTAMKTNRVSEV--NHNN-- 895
R+ +D ++ + + VP + P L A + M+ ++ +NN
Sbjct: 295 TELNKDRTSRDSSPVMRSSSTLPVPQPSSAPPTPTRLTGANSDMEEEERGDLIQFYNNIY 354
Query: 896 ------------DGPCPGSPKVSVFPALPDMSPKKV--SATHNVYVSPLRTSKMDALISH 941
+P +S +P + SP+++ S H VY+SP K + ++S
Sbjct: 355 IKQIKTFAMKYSQANVMDAPPLSPYPFVRTGSPRRIQLSQNHPVYISP---HKNETMLSP 411
Query: 942 SSKSYYACVGESTHAYQSPSKDLTDIN 968
K +Y + SPSK L +IN
Sbjct: 412 REKIFY-------YFSNSPSKRLREIN 431
>gi|425876817|gb|AFY07415.1| retinoblastoma-like protein [Schmidtea mediterranea]
Length = 1034
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%), Gaps = 49/260 (18%)
Query: 745 IFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFY 804
+FF + L+++R+ + +RL +S+ + ++ F+ I+ + T L +R IDQ+ILCC +
Sbjct: 729 LFFRHMYFLSSLRLRDICDRLHISRDLMCKIWTTFEHIITEETHLLKDRCIDQVILCCIF 788
Query: 805 GVAKI-SQLNLTFREIIYNYRKQPQCKPQVFRSVFVDW---------------------- 841
V ++ S NL F EI+ YR Q Q +++RSV ++
Sbjct: 789 AVTRVASSRNLAFHEILQMYRMQQQSTREIYRSVLIESVKTNTGITTGGLPTDCKTNVHT 848
Query: 842 --ASARQSGRSEQDHVDIITFYNKIFVPA----VKPLLVELGPAGTAMK---TNRVSEVN 892
++ R+++ DI FYN +F+P VK L+ +G+ + T S ++
Sbjct: 849 SPGGTQRLIRTKEVRDDITRFYNHVFLPTVHNYVKRFLINYLMSGSNVSVSLTGPNSNLS 908
Query: 893 HNNDGPCPGSPKVSVFPALPDM------SPKKVSATHNVYVSPLRTSKMDALISHSSKSY 946
++ P P +S P + + +++S N++VSP +T I+ S K
Sbjct: 909 KSSSQPQLNQPHLSPMPIRNNFDQILGSTSRRISNNKNIFVSPAKTQ-----ITMSPKRV 963
Query: 947 YACVGESTHAYQSPSKDLTD 966
V SPSK+L D
Sbjct: 964 TFTVN------SSPSKELRD 977
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 134/656 (20%), Positives = 256/656 (39%), Gaps = 119/656 (18%)
Query: 27 RLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRR 86
R DLC + L ++ +E ++E N G+ + W LY R
Sbjct: 18 RFEDLCVD-LCIESTVKEEAWDKYKEVS----TNYCIDGDQLQ------WLVCALYECVR 66
Query: 87 LSEKNGENLQQGSNDNEF-NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWEN 145
S + N S DN + +L +L V K++ V FF + ++ +++ + E
Sbjct: 67 KSTTDNIN----SLDNTYVSLARLLSVSKMSFVQFFHRISKW--------ADMVDMNEEL 114
Query: 146 RLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISD--YHRFGWL 203
R + +++ F +++ Y + E F D + QS +D RF WL
Sbjct: 115 RDRIERIESQFSVSAVIFDKYITGFYEIFQKIDESHGGQSMEEKFKVLCTDEELFRFTWL 174
Query: 204 LFLALRIHAFSRFKD------LVTCT------NGLVSILAILIIH----VPVRFRNFNIH 247
L++ ++ + + D L+ CT N L+S L +P F N N
Sbjct: 175 LYIKIKTNFPAICGDIILSFQLLLCTLDWIASNALISKSKQLFNSSFRGLPSDFHNRNWK 234
Query: 248 DSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKT-NTLIADILKKKPCEASECKSEN 306
RF ++ +C D + D + + I +L+K+ + E K +N
Sbjct: 235 APERFPT-------VLKFICESNDMNYIDCKSTRDSFFRNYIEKLLEKEVIKGRETKEDN 287
Query: 307 LEN-----IDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINED---- 357
+ + ++ G++ NL + ++S G+ DER+++N +
Sbjct: 288 VLSSVNFEFNSRGIM---NLYGEYMMAS----------------GDFDERIYLNPNALEE 328
Query: 358 --------DSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAG 409
+ ++ S L+ A+ ++ V T + P A N +A
Sbjct: 329 IGSVNSRANEMMLSSDLTPSAMRYMQEVINCGAVPGSVDTRKATAKP---CAGKHNTVAS 385
Query: 410 GATSKMV----VTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKS-CDKDVTTDVMRRA 464
G S++ + + + +L ++ + S EL L++ C D++ R
Sbjct: 386 GVVSRLNGGVNFNNYDSRVINSNYLIALLSKRQAYASEELTDMLQTHCFHSPMEDIITRL 445
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAE---QRRLEALKLYYRVLEAMCTAEAQ 521
L +F S+ G + + L + QR K+YY LE + +E
Sbjct: 446 DK-LSLLFLSAYNG-KFIDYKTDLRILFQKKQTDPSLQRCQTTHKIYYYALEMILKSEIS 503
Query: 522 VLHAK------------------NLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAV 563
+ + ++++LL + FHR + A E+VL + + FP V
Sbjct: 504 KIELRYKMRSRNSEAGEIKLNNIDISALLKKDEFHRALYAICVEIVLICSDS-SKHFPWV 562
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
LE + A K++E F+R + LPRE+ ++ + + E L++S W S++++SL
Sbjct: 563 LEVLELQAVHFYKIVEIFMRCVD-LPREMVKYFSQVSENLVDSYSWRSDSTLWDSL 617
>gi|194768441|ref|XP_001966320.1| GF22059 [Drosophila ananassae]
gi|190617084|gb|EDV32608.1| GF22059 [Drosophila ananassae]
Length = 854
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 718 PLQSAFASPTRPNPGGGGETCAETG--INIFFCKINKLAAVRINAMVERLQLSQQIRESV 775
PL + +S + P P T + IF K+ LA +RI + L L E +
Sbjct: 555 PLWTMISSASSPLPTSLDVNRNRTAGPLEIFLRKLYLLAWLRIQKLCSELGLCDP--ERI 612
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVF 834
+ +F+ + T L +RH+DQ I+C Y ++ ++ + F +I+ YR QPQ V+
Sbjct: 613 WHIFEHSITHETDLMKDRHLDQNIMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVY 672
Query: 835 RSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
R V + + G E DII FYN I+VPA+K + G T VS
Sbjct: 673 REVLI---GVNEDG--EPKVKDIIYFYNHIYVPAIKKFAI-----GHLSMTPDVS----- 717
Query: 895 NDGPCPGSPK---VSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVG 951
G C S +S P PKKV+ H++YVS + SK + S + Y
Sbjct: 718 --GGCTISSSDLLLSPHPKERAAQPKKVTQNHSLYVSQM--SKNEIQQSPNQIVY----- 768
Query: 952 ESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFDDVDVDVGLVSDSMVA 999
Y SP+K+L +N ++ +R+ L+F D D G V+++ A
Sbjct: 769 ---RFYHSPAKELQLMNEKVRGGKRM---LSFGD-DPTPGTVTETKRA 809
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTN----ERFHRCMLACSAELVLAT 552
A+ R A Y+ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFKLAKSFYFYLLDQILQAEIRNKPDIDLKRLLVQKISLDIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH--EESLPRELRRHLNSLEERLLESMVWE 610
+KT FP VLE I++F+ K+IE +RH L R L +HLNS+EE LE + W
Sbjct: 492 YKTEAYKFPWVLECLSISSFEFQKIIEIVVRHGSHGCLTRSLIKHLNSVEETCLEQLAWV 551
Query: 611 KGSSMYNSLTVARPVL--SAEINR 632
S ++ ++ A L S ++NR
Sbjct: 552 SNSPLWTMISSASSPLPTSLDVNR 575
>gi|298715379|emb|CBJ27990.1| Putative retinoblastoma [Ectocarpus siliculosus]
Length = 1298
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 480 RCVTGSL--QGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERF 537
R T SL +G++L + + ++ +A LYY LE + AE + L +++ + LL E
Sbjct: 613 RAATSSLDARGSDLEAGVVGDAKK-KAEALYYSTLEVLLDAETERLSSEDHSRLLEQETL 671
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
H+ +LAC E VL +++ FP VL R I A DL KV+ESF R LP L+ HL
Sbjct: 672 HKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPMNLKYHLF 731
Query: 598 SLEERLLESMVWEKGSSMY 616
++ ++E + E G+ ++
Sbjct: 732 EVQTEIVERLALEAGAGVF 750
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 743 INIFFCKINKLAAVRINAM-VERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
+++FF ++ K AA + + + RL L + V+ + ++ + QRT + +RH+ +ILC
Sbjct: 866 LDLFFRRLMKRAAEVVAELCLRRLHLPGDTADQVWTVIKRCVAQRTEILKDRHLHHVILC 925
Query: 802 CFYGVAKISQLN--LTFREIIYNYRKQPQC------------KPQVFRSVFVDWA----- 842
Y V K++ + +TF+ II Y++ + V + + +
Sbjct: 926 STYSVCKVNGVTPEVTFKRIIEQYKQLAGAGGGGLSGGVGTPRLSVVKDILLKRGHDEEA 985
Query: 843 -SARQSGRSEQDHVDIITFYNKIFVPAVKPLLVEL 876
+++ DII FYNK+++PA+K ++E
Sbjct: 986 GGEGAGEPQQEERGDIIKFYNKVYIPAMKQFVLEF 1020
>gi|195040219|ref|XP_001991027.1| GH12452 [Drosophila grimshawi]
gi|193900785|gb|EDV99651.1| GH12452 [Drosophila grimshawi]
Length = 818
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 50/276 (18%)
Query: 712 SKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQI 771
+ PLPP ++ P + IF KI +L RI + L L +
Sbjct: 556 ANPLPPYMEVCEGRTAGP-------------LQIFLRKIYQLGWARILTLCNELNLGETK 602
Query: 772 RESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ-LNLTFREIIYNYRKQPQCK 830
E ++ +F+ + + L +RH+DQII+C Y ++++ L F +I++ YR QPQ
Sbjct: 603 AEKIWTIFENSITNKIHLLQDRHLDQIIMCAIYIYIRVTKMLEPKFSKIMHAYRNQPQAV 662
Query: 831 PQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSE 890
V+R V + S +++G E ++ DII FYN +VP + T TNR
Sbjct: 663 NSVYREVLI---SVKENG--ELEYRDIIHFYNYTYVPEM-----------TKFCTNR--- 703
Query: 891 VNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSY-YAC 949
+N N D + +S P PKK+ H++YV+ + SK + S Y +C
Sbjct: 704 LNANTDN---VNLLLSPHPIERTTVPKKLIPNHSLYVT--KMSKNEIQQSPDQLEYIISC 758
Query: 950 VGESTHAYQSPSKDLTDINHRLNSNRRVRGTLNFDD 985
SP+K L D+N ++ N + L+F D
Sbjct: 759 ---------SPAKKLEDMNKKVLGNG--KRMLSFGD 783
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 207/491 (42%), Gaps = 79/491 (16%)
Query: 148 EAKELQANFVHLSILSKSYKRIYRE-FFLPSDANGDKQSAAASTSGYISDYHRFGWLLFL 206
+ +EL+ F L K Y++I+ + FF P N K S ++ YI W LFL
Sbjct: 135 QMEELERKFFITFTLYKKYRKIFEQVFFCP--PNEKKYSKYSTKCSYIK-LDDICWRLFL 191
Query: 207 ALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIH----------DSSRFVKKS 256
+ + DLVT N ++ + ++ +V R I+ +S F +
Sbjct: 192 CCKNQKPTTTLDLVTSYNLMMCCIDLIYANVLAEKRTDLINPNFEGLPPNWNSPHFDETQ 251
Query: 257 NKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLI 316
+ ++ C + D + K M+ T + ++I+ S ++ + + L
Sbjct: 252 ARNHCILKYFCEMTDEA-----KTMKAT--VFSNIMH------SFFQANTIFGKEETLL- 297
Query: 317 YFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGA 376
L+ + + +L L Y+ + GE DER+ L + L G N
Sbjct: 298 ---GLVANKNFERNLRSLNVSYEQYVLSVGEFDERI--------LAAYQLDAGEHNNLNE 346
Query: 377 KRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICP 436
+ +L PV +T R P + S+ PV+ A K L I
Sbjct: 347 Q----ALRPPVTPLT------RKQDLPPQSVM----SEQKFEPVAHATNNVKKLSATISR 392
Query: 437 LPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIW 496
+ ++P+ F+K ++ +++ I+E +G + + +
Sbjct: 393 I-TEPT----EFVKQAGEEHIAKILK----IIEQ------MGNKFLAKYPMRSE------ 431
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
AE R A LY+ +++ + AE + + + ++ + F+ ++ C ELVL + T
Sbjct: 432 AENRFRLAKSLYFYLMDHILRAE--IKNKPQIMRRISLDIFNVTLMTCCTELVLYAYNT- 488
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRH-EESLPRELRRHLNSLEERLLESMVWEKGSSM 615
+ FP +LE I AF+ K+IE +R+ ++ L R L +HLNS+EE LE +VW++ S
Sbjct: 489 ELNFPWILECFSINAFEFFKIIEIVVRNGKDCLTRSLVKHLNSIEETCLERLVWQRISPA 548
Query: 616 YNSL-TVARPV 625
++ + + A P+
Sbjct: 549 WDIIGSAANPL 559
>gi|281209031|gb|EFA83206.1| Rb-like protein [Polysphondylium pallidum PN500]
Length = 956
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 66/340 (19%)
Query: 535 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRR 594
++FHR +LA S E+V +HK ++LFP ++ G+ F ++I+S ++ ++S+P L
Sbjct: 479 KQFHRSLLATSFEMVAYSHKLDSLLFPHFVKLFGLHPFSYYRIIDSIVKIDDSMPHLLVT 538
Query: 595 HLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSS 654
HL S+EER++E W +GS+++ + ++ + + +L A +S
Sbjct: 539 HLLSIEERIVEQYAWTEGSTVFALIESSK--------------EHLRTLSPYAASSTSTS 584
Query: 655 GGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKP 714
L P + +P I+ NF++P K +KP
Sbjct: 585 TPLKPPSTPSHASNTPAFTNFIQ-----------------NFSTPTKP--------TAKP 619
Query: 715 LPPPLQSAFASPTR-----PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ 769
P A+PT +PG T IN FF K+ L + L L
Sbjct: 620 TP-----LIATPTSYGSKMQSPGPKSRTSI-VLIN-FFRKVLNLIRGKCKNFCMALSLPN 672
Query: 770 QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQC 829
+ + ++ + T L NR +D I + Y + K++ + T++ II +
Sbjct: 673 DVLHQILWASINLIIEHTELLKNRSLDIIAISTIYAICKLNSIAKTYKTIIES------- 725
Query: 830 KPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAV 869
+ V+ D +G DI+ FYN++++P +
Sbjct: 726 -TSIPTKVYKDIPLTNGTG-------DIVAFYNELYLPTM 757
>gi|242072656|ref|XP_002446264.1| hypothetical protein SORBIDRAFT_06g011601 [Sorghum bicolor]
gi|241937447|gb|EES10592.1| hypothetical protein SORBIDRAFT_06g011601 [Sorghum bicolor]
Length = 91
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 13/95 (13%)
Query: 935 MDALISHSSKSYYACVGESTHAYQSPSKDLTDINHRLN-SNRRVRGTLNFDDVDVDVGLV 993
+DAL+S SS+S+YAC+GE THAYQSPSKDL IN RLN S RRV LNF +V
Sbjct: 1 IDALLSPSSRSFYACIGEGTHAYQSPSKDLAAINSRLNYSGRRVNSRLNFQ-------MV 53
Query: 994 SDSMVANSLYLQNGSA-----AASTCAVLKPEQPD 1023
SDS+VA SL NG + AA+ + K +PD
Sbjct: 54 SDSVVAGSLGQPNGGSTSFKPAAAFSPLSKKRKPD 88
>gi|4139827|pdb|1GUX|B Chain B, Rb Pocket Bound To E7 Lxcxe Motif
gi|29726892|pdb|1O9K|B Chain B, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726894|pdb|1O9K|D Chain D, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726896|pdb|1O9K|F Chain F, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726898|pdb|1O9K|H Chain H, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
Length = 152
Score = 83.6 bits (205), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQI 798
T +++F+ K+ +LA +R+N + ERL LS+ ++ ++ LFQ L L +RH+DQI
Sbjct: 10 TSLSLFYKKVYRLAYLRLNTLCERL-LSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQI 68
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C YG+ K+ ++L F+ I+ Y+ P + F+ V + E+++ II
Sbjct: 69 MMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLI----------KEEEYDSII 118
Query: 859 TFYNKIFVPAVK 870
FYN +F+ +K
Sbjct: 119 VFYNSVFMQRLK 130
>gi|357455619|ref|XP_003598090.1| Retinoblastoma-related protein [Medicago truncatula]
gi|355487138|gb|AES68341.1| Retinoblastoma-related protein [Medicago truncatula]
Length = 192
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 7/71 (9%)
Query: 161 ILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLV 220
++ YKR++ EFF+ +DAN + +S S + IS+ HRFGWLLF +HAFSRFKDLV
Sbjct: 64 VIPWYYKRVFEEFFVSTDANVENKS---SVTNRISECHRFGWLLF----VHAFSRFKDLV 116
Query: 221 TCTNGLVSILA 231
TCTNGL+SI+
Sbjct: 117 TCTNGLISIMT 127
>gi|328768353|gb|EGF78400.1| hypothetical protein BATDEDRAFT_90881 [Batrachochytrium
dendrobatidis JAM81]
Length = 1124
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRT--SLFFNRHIDQIIL 800
+ F KI KLA R + + ++L I + LF ++ T L NRH+D I++
Sbjct: 839 FQVIFGKILKLAYTRFVQLTKAMRLQTHIVNMAWRLFDALICNETHLQLLLNRHLDTIMI 898
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITF 860
C + + +TFRE++ +Y QPQ VF V+++ E+ DI+ F
Sbjct: 899 TCIFTYCRFENTPVTFRELLESYNLQPQFMDSVFTQVYME---------GEERGCDIVKF 949
Query: 861 YNKIFVPAVKPLLVELGP 878
YNK+FVP +K LL L P
Sbjct: 950 YNKVFVPCIKSLLPVLTP 967
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 531 LLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPR 590
L ++ +FHR M+A + E+V T T +L+ I DL+ I+ ++ +P
Sbjct: 686 LASDSQFHRAMMAVAYEMVRETFNISTKT-QNILDGLDIHVVDLALGIDLVVKTHVWIPD 744
Query: 591 ELRRHLNSLEERLLESMVW 609
L + L +EERLLE+ +W
Sbjct: 745 SLVKRLKQIEERLLETDIW 763
>gi|195131539|ref|XP_002010208.1| GI14825 [Drosophila mojavensis]
gi|193908658|gb|EDW07525.1| GI14825 [Drosophila mojavensis]
Length = 802
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 146/637 (22%), Positives = 247/637 (38%), Gaps = 149/637 (23%)
Query: 27 RLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFAFVLYLVRR 86
+ LC++ L++D T E K+ +E +L + S G + WF L++ R
Sbjct: 11 KFESLCRD-LNMDIKTESEAFKMLKE----VLKHYSLEGEIL------HWFCCALFVACR 59
Query: 87 LSEK---NGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW 143
S G+N N N ++LR +++I +F K++ + + + + +
Sbjct: 60 QSTTPTVGGQNAVVMGNCVPLN--NLLRCCQMSIYEFKKKIKLWCDMAN--MPHTFAQQM 115
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFFL--PSDANGDKQSAAASTSGYISDYHRFG 201
E EL+ F + K Y+ I+ + FL P++ N K S + YI
Sbjct: 116 E------ELERKFSITFTIYKKYRDIFDQVFLCPPNEKNHSKNSKCS----YIK-LDDIC 164
Query: 202 WLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIH----------DSSR 251
W LFL + + DLVT N ++ + ++ +V R I+ +S
Sbjct: 165 WRLFLCAKNQKPTTTLDLVTSYNLMMCCIDLIYANVLAEKRTDLINPKFEGLPSNWNSPD 224
Query: 252 FVKKSNKGVDLIASLCSIYDTSEDD----LRKIME---KTNTLIADILKKKPCEASECKS 304
F + + ++A C + D ++D R IM+ +TNT++ +
Sbjct: 225 FDETQARNHCILAYFCEMTDEAKDMKATVFRNIMDSFFQTNTVVGN-------------K 271
Query: 305 ENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSG 364
E L GLI +N + SLNI Y+ + GE DER+ LG+
Sbjct: 272 ETLL-----GLISNKNFERNFK---SLNI---SYEQYVLSVGEFDERI--------LGAY 312
Query: 365 SLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAM 424
N + +L PV +PL+ + + P + PV+ A
Sbjct: 313 QHDASEHNNLNEQ----ALRQPV----TPLTRKQDLPAQP------VMFEQKFEPVANAT 358
Query: 425 TTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTG 484
K L + +HI F GE +
Sbjct: 359 NNVKKLSATV-----------------------------SHITEPTDFVKRQAGEAAIAK 389
Query: 485 SLQGANLMDNIW---------AEQRRLEALKLYYRVLEAM----CTAEAQVLHAKNLTSL 531
LQ M+ + A R A LY+ +++ + T + Q++H +L
Sbjct: 390 MLQTIGEMEEQFVDKFPMRSEARNRFRMAKSLYFYLIDPILRDEITTKPQIVHKISLDIC 449
Query: 532 LTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRH------E 585
+ R ++AC ELVL + T + FP +L+ I AF SK+IE +R+ E
Sbjct: 450 I------RTLMACCTELVLEAY-TTELKFPWILDCFSINAFQFSKIIEIVVRNGIHGTPE 502
Query: 586 ESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVA 622
L R L +HLNS+EE LE +VW++ S + + A
Sbjct: 503 GCLTRSLVKHLNSIEETCLERLVWKRNSPFWEMIDHA 539
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 130/303 (42%), Gaps = 46/303 (15%)
Query: 687 RSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETC--AETGIN 744
RS++ N+ +RL+ N P +P PG A +
Sbjct: 507 RSLVKHLNSIEETCLERLVWKRN-------SPFWEMIDHAPKPLPGWSEVNADKAADQLQ 559
Query: 745 IFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFY 804
IF KI L +RI + L L ++ E ++ +F + +T L +RH+DQII+C Y
Sbjct: 560 IFLRKILLLGWLRIGKLCSELSLGEKQSE-IWTIFDHSITHKTDLMKDRHLDQIIMCAIY 618
Query: 805 GVAKISQLN-LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNK 863
+++ + F +I+ YR QPQ V+R V + + + E +H DII FYN
Sbjct: 619 IYIRVTNMEGPKFSDIMKAYRNQPQAVNSVYREVLI-----KVNENGEYEHKDIIHFYNF 673
Query: 864 IFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATH 923
+VP +K TN +++ N + + SP + P M P+K+
Sbjct: 674 TYVPEMKNFC-----------TNYLAK-NGDKNVNLLMSPHPTERP----MVPRKLIHNQ 717
Query: 924 NVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDINH-RLNSNRRVRGTLN 982
++YV + ++M S V S SPSK L +N L S +RV L+
Sbjct: 718 SLYVKQMSKNEM-----QQSPDQLVYVISS-----SPSKKLDYMNKIVLGSGKRV---LD 764
Query: 983 FDD 985
FDD
Sbjct: 765 FDD 767
>gi|157112868|ref|XP_001657652.1| P130 [Aedes aegypti]
gi|108884618|gb|EAT48843.1| AAEL000128-PA, partial [Aedes aegypti]
Length = 748
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 729 PNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQ-ILNQRT 787
PN +N+FF K AA+R+ + L LS + ++ +F+ ++N
Sbjct: 543 PNGSVSKRKPGNASLNLFFRKYYATAALRLKHLCAHLNLSSRAMVEIWTIFEHSVVNSSK 602
Query: 788 SLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS 847
L +RH+DQ+++C Y A+I + TF +++ YR PQ V+RSVF+ S +
Sbjct: 603 ELIRDRHLDQMVMCSIYLYARIKRDTRTFADVMKAYRTLPQSYSHVYRSVFI---SRKSH 659
Query: 848 GRSEQDHVDIITFYNKIFVPAVKPLLVELG-PAGTAMKTNRVSEVNHNNDGPCPGSPKVS 906
G E+ DII FYN +++ ++ + + G G ++ P P +
Sbjct: 660 GDEERG--DIIRFYNTVYITEMQSVATQFGNEEGRSLML-----------SPLPKTTNRC 706
Query: 907 VFPALPDMSPKKVSATHNVYVSPLRTS 933
+ SPKKV ++Y++P+ S
Sbjct: 707 LL-----QSPKKVDNRISLYLTPMDKS 728
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 491 LMDNIWAEQ---RRLEALK-LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSA 546
+ D W+ Q R E ++ LYYR+LE + AE + + L + F++ +L CSA
Sbjct: 401 MHDQKWSRQAIASRWEKIQTLYYRLLEFIIRAEVKRTKVNMVKELCCEDMFNQTLLVCSA 460
Query: 547 ELVLATHKTVTMLFPAVLERTGITAFDLSKVIE-SFIRHEESLPRELRRHLNSLEERLLE 605
E+V H + FP +L+ + F ++IE + H + L RE+ +HL+ +E + +E
Sbjct: 461 EIVTFAH-NLQQNFPCILKVFDMPPFIFYRIIELVMMHHNDLLSREITKHLDIIENQCIE 519
Query: 606 SMVWEKGSSMYNSLT---VARPVLSAEINR-------LGLL-----ADPMPSLDAIATHI 650
S+ W+ S ++ ++ P+ + +++ L L A L + H+
Sbjct: 520 SLCWQSNSPLWRAMENIGYRAPIPNGSVSKRKPGNASLNLFFRKYYATAALRLKHLCAHL 579
Query: 651 NFSSGGLSPVHSLHKH 666
N SS + + ++ +H
Sbjct: 580 NLSSRAMVEIWTIFEH 595
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 145/346 (41%), Gaps = 42/346 (12%)
Query: 19 GDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFA 78
G+ TE R D+C L++D T ++ F++T+ ++ + W
Sbjct: 7 GEKLRTEHR--DIC-GQLNIDAATEEQSWNSFQDTQKTYNLDVDQLH----------WLC 53
Query: 79 FVLYLV-RRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL-VKSGPILS 136
L++ R+ N + N ++ +LR+ K+N+ +FFK++ Q++ + S P
Sbjct: 54 CSLFITCRKKVTPTVGNTNSVLHGNCVSMTRLLRLCKINLNEFFKKINQWMEMTSQP--- 110
Query: 137 NIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLP----SDANGDKQSAAASTSG 192
D N + + LQ NF+ + + Y+ ++ F+ G K TSG
Sbjct: 111 ----EDCRNAISS--LQHNFIVTMSIYQKYRDMFPSMFVAPCEEEQRRGKKSKPQPCTSG 164
Query: 193 YISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRF 252
++ +F W LF+ + + DLV N L+ L ++ +V R ++ +
Sbjct: 165 QLN---KFCWKLFICAKSEYPDQNGDLVKSYNMLLCCLDLVYANVIAEGRTDLVNPAFEG 221
Query: 253 VKKS--NKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENI 310
+ K ++GV +C I ED+ ++ I ++ C+ N+
Sbjct: 222 LPKDFISQGVIPPEPVCIIEHIKEDNCSSVIMDMRETIWKSTIQQFCQT------NVLRG 275
Query: 311 DTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINE 356
+++ L+ L+ ++ +L L+ Y+ + GE DE + + +
Sbjct: 276 NSETLM---ELITVANFEFNLKSLDTTYNTFILSYGEFDESIALEQ 318
>gi|443697256|gb|ELT97791.1| hypothetical protein CAPTEDRAFT_132839 [Capitella teleta]
Length = 323
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 10/136 (7%)
Query: 742 GINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILC 801
+++FF K +LA R++ + L L+ +++ ++ + + RT + +RH+DQ+I+C
Sbjct: 171 SLSLFFVKACRLAHHRMSILCGHLDLNSDLQKQIWSCIETCICHRTKILQDRHLDQVIMC 230
Query: 802 CFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFY 861
YGV KI + ++TFR I+ Y P QV+R V A ++ S II+FY
Sbjct: 231 ALYGVCKIREKDITFRSIVKKYLLLPHSSSQVYRHV----AMPDEAASS------IISFY 280
Query: 862 NKIFVPAVKPLLVELG 877
N+IF+ +K LV +
Sbjct: 281 NQIFMQQLKDHLVAIS 296
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHK-- 554
AE R A KL+Y+ L ++ E + L++LL +F + +LAC E+V+AT+
Sbjct: 21 AELRFQMASKLFYKTLISLLQLEQNEDSSSELSALLQMAKFLKSLLACCIEVVMATYNNS 80
Query: 555 -----TVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
+T F +L + FDL +V+ SF++ E LP + +HL ++E+ ++ +VW
Sbjct: 81 CEQYGMLTGSFEWILRVFNLHGFDLFRVLGSFLKAETQLPSSVAKHLQNVEDEIILHVVW 140
Query: 610 EKGSSMYNSLTVAR 623
+ S ++++L R
Sbjct: 141 KAESPLFDTLLSNR 154
>gi|189312403|gb|ACD88346.1| retinoblastoma [Scophthalmus maximus]
Length = 262
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 50/254 (19%)
Query: 297 CEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNI-----LEKDYDNATRNKGELDER 351
C+ +EC +E ++N+ F +D LS S + L++ Y+ ++D R
Sbjct: 51 CKENECNAEEVKNVYQTS---FSAFLDSLDLSRSPDFPQVTDLDQQYEEHYLKSRDIDGR 107
Query: 352 VFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGA 411
+F + D+++L V ++ +R +P K LS + P
Sbjct: 108 LFFDGDETVLAP------KVEVSQVER------TPKKN----LSDDEAVLVPPQ------ 145
Query: 412 TSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAI 471
TP+ AMT+ + L+ + KPS+ L+ + K+C D T DV++R + +A
Sbjct: 146 ------TPIRAAMTSIQQLKGDLISTGDKPSSNLDTYFKNCTVDPTQDVLKRLETLEKAF 199
Query: 472 FPSSG--LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLT 529
G +G RCV + EQR ++ YY V+EAM +E + L +N +
Sbjct: 200 SQRFGQAVGPRCV------------VLGEQRFFLGVRQYYXVMEAMLKSEEKRLSVQNFS 247
Query: 530 SLLTNERFHRCMLA 543
LL + FH +L
Sbjct: 248 KLLNDSTFHTSLLG 261
>gi|223945097|gb|ACN26632.1| unknown [Zea mays]
gi|413925020|gb|AFW64952.1| hypothetical protein ZEAMMB73_472172 [Zea mays]
Length = 117
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 163 SKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTC 222
S+ Y++ Y E F +G +S DY FGW LFL LR + FKDLV+C
Sbjct: 28 SRFYRKAYNELF-----SGLITEWEPESSTNTPDYMLFGWHLFLTLRSRSPELFKDLVSC 82
Query: 223 TNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKS 256
+GLV++LAIL++HVP +FR F I SS S
Sbjct: 83 IHGLVAVLAILLVHVPAKFRTFTIEGSSHLSNSS 116
>gi|226374705|gb|ACO52487.1| retinoblastoma, partial [Liza aurata]
Length = 223
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 775 VYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVF 834
++ LFQ L L +RH+DQ+++ Y + K+ ++L F+ I+ +Y+ P + F
Sbjct: 13 IWTLFQHTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKTIVTSYKNMPNTSQETF 72
Query: 835 RSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN 894
+ V + +E + II FYN++F+ +K +++ A T T
Sbjct: 73 KHVLI----------TEGHYDSIIIFYNQVFMQRLKTNILQY--ASTRPPTL-------- 112
Query: 895 NDGPCPGSPKVSV-FPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGES 953
P P P+ FP SP +V ++NVY+SP+++ +M + +GES
Sbjct: 113 --SPIPQIPRSPYKFPN----SPLRVPGSNNVYISPMKSPRMSPSLMTPRTRMLVSIGES 166
Query: 954 THAYQSPSKDLTDINHRLNSNRRV 977
S IN +NS+ R
Sbjct: 167 FGQ----SNRFQKINQMVNSSDRT 186
>gi|344253823|gb|EGW09927.1| Retinoblastoma-associated protein [Cricetulus griseus]
Length = 302
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 39/190 (20%)
Query: 750 INKLAAVRINAMVERLQLSQ-QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAK 808
+ +LA +R+N + RL ++ ++ LFQ L L +RH+DQI++C YG+ K
Sbjct: 27 LYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMKDRHLDQIMMCSMYGICK 86
Query: 809 ISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPA 868
+ ++L F+ I+ Y+ P + F+ V + E++ II FYN +F+
Sbjct: 87 VKNIDLKFKIIVTAYKDLPHAAQETFKRVLI----------REEEFDSIIVFYNSVFM-- 134
Query: 869 VKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSAT------ 922
+KTN + + + P P +S P +P SP K S++
Sbjct: 135 ------------QRLKTNI---LQYASTRP----PTLSPIPHIPR-SPYKFSSSPLRIPG 174
Query: 923 HNVYVSPLRT 932
N+Y+SPL++
Sbjct: 175 GNIYISPLKS 184
>gi|449019664|dbj|BAM83066.1| similar to retinoblastoma-family protein [Cyanidioschyzon merolae
strain 10D]
Length = 916
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 733 GGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRES-VYCLFQQILNQRTSLFF 791
G + +++FF K+ A RI + RL + ++ E+ V+ +F+ L ++ LF
Sbjct: 599 GDMSSIPTAALDLFFDKLLMQADYRILNVCARLGICEEAFENRVWSIFKLALTEQWELFI 658
Query: 792 NRHIDQIILCCFYGVAKISQ-LNLTFREIIYNYR---KQPQC------KPQVFRSVFVDW 841
RH+D ++LCCFYG AK + L F +II YR +C V+R + +D
Sbjct: 659 GRHLDTVLLCCFYGAAKTQRSLQFKFVDIIRAYRAVVADSECIRLSDSLQTVYRDLALD- 717
Query: 842 ASARQSGRSEQDHVDIITFYNKIFVPAVKP-LLVELGPAGTA 882
GR DII FYN IFVP +K LL + P G A
Sbjct: 718 ----DGGRG-----DIIAFYNLIFVPHMKRYLLGQTTPEGPA 750
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKN--LTSLLTNERFHRCMLACSAELVLATHK 554
AEQR E + +Y+ LE++ AE Q ++ + LL + FH+ +L C+ E V A++
Sbjct: 471 AEQRIGEVMAVYWYALESILNAETQRMNGSTDFVPKLLALQPFHKALLLCAVETVCASYG 530
Query: 555 TVTML-FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 613
+ F +LE ++ FD K+I +++ + E+LP + +R L + +E +L + W+ S
Sbjct: 531 IRDEIHFEHLLESLKLSPFDFIKIIGAYVLNVENLPPQAKRRLAACQECVLCVLAWQSDS 590
Query: 614 SMYNSL 619
+ +L
Sbjct: 591 LLVRAL 596
>gi|17508261|ref|NP_491686.1| Protein LIN-35 [Caenorhabditis elegans]
gi|4164606|gb|AAD05570.1| synthetic multivulva protein LIN-35 Rb [Caenorhabditis elegans]
gi|351065894|emb|CCD61908.1| Protein LIN-35 [Caenorhabditis elegans]
Length = 961
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 694 NNFTSPVKDRLLGLNNLKSKPLPPP--LQSAFASPTRPNPGGGGETCAETGINIFFCKIN 751
F D+L + +K P+ P L+ P P + + IF +
Sbjct: 700 QEFGEDWADKLNSYSPIKFTPIKKPDDLRDELGRPIVP------QNQTSRTLRIFLKRTY 753
Query: 752 KLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ 811
AA R+ + +R+ + + + + LF +L T +F +RH+DQI+LCC + + KI++
Sbjct: 754 FTAARRLQDLTDRVSMGARAKSQCWSLFDYLLRNDTLIFMDRHLDQILLCCVFVIMKINE 813
Query: 812 LNLTFREIIYNYRKQPQCKPQVFRSVFV----------------DWASARQSG-RSEQDH 854
++ F EI+ YR+Q V+RSV V + R G + E+
Sbjct: 814 SSMLFTEIMAQYRRQSANSLLVYRSVTVFQEQLNPENPQAVNTKETILERLEGPQKEKTT 873
Query: 855 VDIITFYNKIFVPAVKPLLVELGPAG 880
VDII +YN F +K ++ ++ A
Sbjct: 874 VDIIKYYNIEFRDRIKYIIGQIDSAS 899
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 479 ERCVTGSLQGANLMDNI----WAEQRRLEALKLYYRVLEAMCTAE-AQVLHAKNLTSLLT 533
ER ++ L G + +NI + ++ LE + L + +E + AE + + ++L +++
Sbjct: 550 ERTLSAEL-GETINENIPKYHYNVRKELELVFLIF--MEKIIVAELKKKVREEDLLNVIR 606
Query: 534 NERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELR 593
E F + EL+L ++ FP E G+ F KVI+ I HE+ L R++
Sbjct: 607 REEFLDSVFCFCVELILVSNG-YDRPFPWSAELCGVHPFMFHKVIDLMITHEKQLSRQMV 665
Query: 594 RHLNSLEERLLESMVWEKGSSMY 616
+H + +EE ++E W+ S ++
Sbjct: 666 QHFSRIEETVIEYFSWKSDSPLW 688
>gi|7673363|gb|AAF66827.1|AF195899_1 RB-related protein RBF2 [Drosophila melanogaster]
Length = 782
Score = 73.2 bits (178), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 209/538 (38%), Gaps = 105/538 (19%)
Query: 105 NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW----EN--RLEAKELQANFVH 158
+L +LR K+N+ F + + + +W EN +LE +EL+
Sbjct: 94 SLTRLLRSFKMNVSQFLRRMEHW--------------NWLTQNENTFQLEVEELRCRLGI 139
Query: 159 LSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHAFSRF 216
S L + YK I+R F+ D +A + Y FGWLLFL +R + F+
Sbjct: 140 TSTLLRHYKHIFRSLFVHPGKGADPGAANHYQALY-----EFGWLLFLVIRNELPGFA-I 193
Query: 217 KDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDD 276
+L+ LV + +L ++ R+ I V K+ D L + Y
Sbjct: 194 TNLINGCQVLVCTMDLLFVNALEVPRSVVIRREFSGVPKNWDTEDFNPILLNKYS----- 248
Query: 277 LRKIMEKTNTLIADILKKKPCEASEC---KSENLENIDTDGL---IYFENLMDDSSLSSS 330
++E LI ++ K + K+ + +D + + ++ + L +
Sbjct: 249 ---VLEALGELIPELPAKGVVQMKNAFFHKALIMLYMDHSLVGDDTHMREIIKEGMLDIN 305
Query: 331 LNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTI 390
L L + Y N + E+DERV ++ GA+ G DS SP
Sbjct: 306 LENLNRKYTNQVADISEMDERVLLS-----------VQGAIETKG-----DSPKSPQFAF 349
Query: 391 TSPLSP-HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFL 449
+ SP HR ++H P S ++ +I P K A
Sbjct: 350 QTSSSPSHRKLSTHD-------------LPASLPLS-------IIKAFPKKEDA------ 383
Query: 450 KSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYY 509
DK V + L E T ++ + +D + +R +A LYY
Sbjct: 384 ---DKIVN--------------YLDQTLEEMNQTFTMAVKDFLDAELSGKRFRQARGLYY 426
Query: 510 RVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT--MLFPAVLERT 567
+ L+ + E + L+ + +LAC EL L H + + FP VL
Sbjct: 427 KYLQKILGPELVQKPQLKIGQLMKQRKLTAALLACCLELALHVHHKLVEGLRFPFVLHCF 486
Query: 568 GITAFDLSKVIESFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
+ A+D K++E +R++ L REL +HL+ +EE LES+++ K S ++ L P
Sbjct: 487 SLDAYDFQKILELVVRYDHGFLGRELIKHLDVVEEMCLESLIFRKSSQLWWELNQRLP 544
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 787 TSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ 846
+ L NRH+DQ++LC + ++ +L+LTF II +YR+QP + +R V +
Sbjct: 607 SRLLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLG------ 660
Query: 847 SGRSEQDHVDIITFYNKIFVPAV 869
+G++ DIITFYN ++V ++
Sbjct: 661 NGQT----ADIITFYNSVYVQSM 679
>gi|168043606|ref|XP_001774275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674402|gb|EDQ60911.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1124
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 245 NIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKS 304
+ S R + SN +A LC + + + R+ T +IA + C
Sbjct: 872 GVARSPRCCQASNH----VACLCGVPEFHLEVRRRCHPATCAVIACAGSARFTGPGRC-- 925
Query: 305 ENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGS 363
DG+ YFE LM+ +SS+L ILE+DYD R++GELDER+FIN +DSL+G+
Sbjct: 926 ------GFDGVTYFEGLMEVEQISSNLVILEEDYDGWYRSRGELDERMFINGEDSLIGA 978
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 91 NGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADWENRLE 148
G+ ++ G+ F +LR +L++V+FFKELPQFL K+GP L ++YG DWE RL+
Sbjct: 681 GGDRVENGAPAG-FTFSQLLRETRLSVVEFFKELPQFLAKAGPTLKSVYGEDWEKRLQ 737
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 370 AVNITGAKRKFDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKW 429
AV G R S ASP +SP SS + G+AGG+T K TPVS MTTAKW
Sbjct: 1059 AVTSAGQGRAVSSGASP----SSPCGSPESSPAVMGGVAGGSTCKPPPTPVSITMTTAKW 1114
Query: 430 LRTVICPL 437
LRTVI PL
Sbjct: 1115 LRTVIAPL 1122
>gi|380804135|gb|AFE73943.1| retinoblastoma-like protein 1 isoform a, partial [Macaca mulatta]
Length = 239
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 39/259 (15%)
Query: 322 MDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFD 381
+D SS + + + K+Y+ G+ DER+F+ D A G RKF
Sbjct: 1 LDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGAD------------AEEEIGTPRKFT 48
Query: 382 SLASPVKTITSPLSPHRSSASHPNGIAGGATS------------KMVVTPVSTAMTTAKW 429
+P+ +T+ + + H A S + V+TPV++A +
Sbjct: 49 G-DTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSR 107
Query: 430 LRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGA 489
L++++ L + PS +L +SC ++ ++M+ IL+ G+GE Q
Sbjct: 108 LQSIVAGLKNAPSDQLTNIFESCVRNPMENIMK----ILK------GMGETFCQHYTQST 157
Query: 490 NLMDNI---WAEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSA 546
+ +A R A LYY++LE + E + LH +++ LL + FH ++AC
Sbjct: 158 DEQPGSHIDFAVNRLKLAEILYYKILETVMVQETRRLHGMDMSVLLEQDIFHHSLMACCL 217
Query: 547 ELVLATHKTVTMLFPAVLE 565
E+VL + + FP ++E
Sbjct: 218 EIVLFAYSS-PRTFPWIIE 235
>gi|6469620|gb|AAF13358.1|AF154334_1 unknown [Eufolliculina uhligi]
Length = 764
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 746 FFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYG 805
FF ++ AA R++ + L LS ++E+ + + + +L + L RH+DQ+++C YG
Sbjct: 544 FFKRVYSQAACRLSELATSLGLSDALKENSWVVVKYLLTDKLELLVGRHLDQMVICSIYG 603
Query: 806 VAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVD-IITFYNKI 864
K + ++F +I+ +Y+K ++ V + E H D +I FYNK+
Sbjct: 604 TCK-GRSEVSFTKIVESYKKLFNEDQSIYMQVLI-----------EGSHFDTVIQFYNKV 651
Query: 865 FVPAVKPLLVELGPAGT 881
F+P +K L+++ T
Sbjct: 652 FMPTLKEFLIDMHQGKT 668
Score = 49.7 bits (117), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 180/471 (38%), Gaps = 67/471 (14%)
Query: 152 LQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRIH 211
++A V +++ SK +K+I+ + F+ +G +++ + +H F WLLF R
Sbjct: 102 IKAQGVTMALFSK-FKKIWDDLFI----DGREENT-------LQVFH-FCWLLFAYARKE 148
Query: 212 AFSRFKDLVTCTNGLVSILAILIIHVP--VRFRNFNIHDSSRFVKKSNKGVDLIASLCSI 269
L C N L S+L ++ +P VRF +G L ++
Sbjct: 149 LVDTPSILFDCGNLLTSVLHTVLTRLPSTVRF---------------EQGTAL-QTILDA 192
Query: 270 YDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGL-IYFENLMDDSSLS 328
T+ED +R + ++ +A + + N E+ L +Y E L D
Sbjct: 193 MKTTEDKIRPWSTQLDSFLAQLSSNSGFILDDWIGANYEHNSQLLLRLYKEKLGADDPDE 252
Query: 329 SSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVK 388
++L E+ T K ERV+ L+G ++ V G +D L + +
Sbjct: 253 TTLA--ERTDQPQTPTK----ERVY----SPLVGRSNIRRETV---GRILNWDKLPTDLG 299
Query: 389 TITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPL-PSKPSAELER 447
I+S L R P G +T P++ M +WL +I S AE R
Sbjct: 300 -ISSRLKEFRLPPDSP--FIGCST------PMTMVMENHRWLSDIIDDENTSNLYAESLR 350
Query: 448 FLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKL 507
L D T + ++ +F +G G+ A ++ + A+ L
Sbjct: 351 TLHEADVQTLTAETEQITSRVDTLFKEKSIGGNPAEGA---AFILSHFEADDDGGHDDYL 407
Query: 508 YYRVLEAMCTAEAQVLHAKNLTSLLTN---------ERFHRCMLACSAELVLATHKTVTM 558
+ E AE + L + L+ N R + AC E L TH+ +
Sbjct: 408 HGSSDENYRVAEVKTLLHHTIRVLVDNGSLKQQKPGSSLWRSLYACCIETSLYTHEVTNI 467
Query: 559 LFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
+L+ I FD K I F+ + +P L+ HL +E +++ + W
Sbjct: 468 SLGELLKACDIGMFDFWKTIRVFLTFDARIPMGLKWHLKEVELQIVSCLAW 518
>gi|341879504|gb|EGT35439.1| hypothetical protein CAEBREN_30365, partial [Caenorhabditis
brenneri]
Length = 828
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 694 NNFTSPVKDRLLGLNNLKSKPLPPP--LQSAFASPTRPNPGGGGETCAETGINIFFCKIN 751
F D+L + +K P+ P L+ P P + + IF ++
Sbjct: 621 QEFGEDWSDKLNSYSPIKFTPIKKPEDLRDELGRPIIP------QNQTSRTLRIFLKRVY 674
Query: 752 KLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQ 811
AA R+ + +R+ + + + + LF +L T +F +RHID I+LCC + + KI++
Sbjct: 675 FTAASRLQELTDRIGMGSRGKSQCWSLFDYLLRSDTLIFMDRHIDHILLCCVFVIMKINE 734
Query: 812 LNLTFREIIYNYRKQPQCKPQVFR--SVFVDWASARQ----------SGRSE-----QDH 854
+TF+EI+ YR+Q V+R SVF D + R E +
Sbjct: 735 SPVTFQEILGQYRRQNSDASSVYRNVSVFYDQLDEENGEPINIKETITERLEAPTRIKTE 794
Query: 855 VDIITFYNKIFVPAVKPLLVELGPA 879
VD+I +YN F +K ++ ++ A
Sbjct: 795 VDVIKYYNLEFRERIKFIIGQIDNA 819
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 501 RLEALKLYYRVLEAMCTAE-AQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTML 559
R E ++Y +E + +E + + ++L +++ E F + EL L ++
Sbjct: 494 RKELETVFYVFMEKIIVSEMKKKVREEDLLNVIRREEFLDSVFCFCVELTLFSN-NYDRA 552
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
FP E F KVI+ I HE+ L R++ RH + +EE+++E W+ S ++
Sbjct: 553 FPWSAELCECHPFMFHKVIDLMITHEKRLSRQMVRHFSRIEEKVVECFAWKCDSPLW 609
>gi|226374703|gb|ACO52486.1| retinoblastoma, partial [Dicentrarchus labrax]
Length = 207
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 31/195 (15%)
Query: 783 LNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA 842
L L RH+DQ+++ Y + K+ ++L F+ I+ Y+ P + F+ V +
Sbjct: 2 LQHEHELMRGRHLDQLMMSAMYAICKVKSVDLRFKTIVTAYKNMPNTNQETFKHVLI--- 58
Query: 843 SARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGS 902
+E + II FYN++F+ +K +++ A T T P P
Sbjct: 59 -------TEGHYDSIIVFYNQVFMQKLKTNILQY--ASTRPPT----------LSPIPQI 99
Query: 903 PKVSV-FPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPS 961
P+ FP SP +V ++NVY+SPL++ +M I +GES PS
Sbjct: 100 PRSPYKFPN----SPLRVPGSNNVYISPLKSPRMSPGIMTPRSRMLVSIGESF----GPS 151
Query: 962 KDLTDINHRLNSNRR 976
IN +NS+ R
Sbjct: 152 NRFQKINQMVNSSDR 166
>gi|17737995|ref|NP_524372.1| Retinoblastoma-family protein 2 [Drosophila melanogaster]
gi|7416991|gb|AAF62399.1|AF197059_1 retinoblastoma protein homolog RBF2 [Drosophila melanogaster]
gi|7300089|gb|AAF55258.1| Retinoblastoma-family protein 2 [Drosophila melanogaster]
gi|17945750|gb|AAL48923.1| RE32990p [Drosophila melanogaster]
gi|220948322|gb|ACL86704.1| Rbf2-PA [synthetic construct]
Length = 783
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 122/538 (22%), Positives = 209/538 (38%), Gaps = 105/538 (19%)
Query: 105 NLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW----EN--RLEAKELQANFVH 158
+L +LR K+N+ F + + + +W EN +LE +EL+
Sbjct: 94 SLTRLLRSFKMNVSQFLRRMEHW--------------NWLTQNENTFQLEVEELRCRLGI 139
Query: 159 LSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHAFSRF 216
S L + YK I+R F+ D +A + Y FGWLLFL +R + F+
Sbjct: 140 TSTLLRHYKHIFRSLFVHPGKGADPGAANHYQALY-----EFGWLLFLVIRNELPGFA-I 193
Query: 217 KDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDD 276
+L+ LV + +L ++ R+ I V K+ D L + Y
Sbjct: 194 TNLINGCQVLVCTMDLLFVNALEVPRSVVIRREFSGVPKNWDTEDFNPILLNKYS----- 248
Query: 277 LRKIMEKTNTLIADILKKKPCEASEC---KSENLENIDTDGL---IYFENLMDDSSLSSS 330
++E LI ++ K + K+ + +D + + ++ + L +
Sbjct: 249 ---VLEALGELIPELPAKGVVQMKNAFFHKALIMLYMDHSLVGDDTHMREIIKEGMLDIN 305
Query: 331 LNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTI 390
L L + Y N + E+DERV ++ GA+ G DS SP
Sbjct: 306 LENLNRKYTNQVADISEMDERVLLS-----------VQGAIETKG-----DSPKSPQLAF 349
Query: 391 TSPLSP-HRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFL 449
+ SP HR ++H P S ++ +I P K A
Sbjct: 350 QTSSSPSHRKLSTHD-------------LPASLPLS-------IIKAFPKKEDA------ 383
Query: 450 KSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYY 509
DK V + L E T ++ + +D + +R +A LYY
Sbjct: 384 ---DKIVN--------------YLDQTLEEMNRTFTMAVKDFLDAELSGKRFRQARGLYY 426
Query: 510 RVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT--MLFPAVLERT 567
+ L+ + E + L+ + +LAC EL L H + + FP VL
Sbjct: 427 KYLQKILGPELVQKPQLKIGQLMKQRKLTAALLACCLELALHVHHKLVEGLRFPFVLHCF 486
Query: 568 GITAFDLSKVIESFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
+ A+D K++E +R++ L REL +HL+ +EE L+S+++ K S ++ L P
Sbjct: 487 SLDAYDFQKILELVVRYDHGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELNQRLP 544
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 787 TSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQ 846
+ L NRH+DQ++LC + ++ +L+LTF II +YR+QP + +R V +
Sbjct: 607 SRLLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSLG------ 660
Query: 847 SGRSEQDHVDIITFYNKIFVPAV 869
+G++ DIITFYN ++V ++
Sbjct: 661 NGQT----ADIITFYNSVYVQSM 679
>gi|268565519|ref|XP_002639469.1| C. briggsae CBR-LIN-35 protein [Caenorhabditis briggsae]
Length = 948
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 41/221 (18%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+ IF + AA R+ + +R+ ++ + + + +F +L T +F +RH+DQIILCC
Sbjct: 730 LRIFLKRTYFTAARRLQELTDRIAMATRPKSQCWSVFDYLLRNDTLIFMDRHLDQIILCC 789
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFR--SVFVDWASARQ----------SGRS 850
+ + ++ ++TF EI+ YR+Q V+R SVF D S R
Sbjct: 790 VFVIMRMHGSSITFHEIMGQYRRQSSSAMYVYRNVSVFRDQVDEDNPVPVNLKETISERL 849
Query: 851 E-----QDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKV 905
E + VD+I +YN F+ +K ++ ++ TA+ + + + P P S
Sbjct: 850 EAPPKSKTTVDVIKYYNIEFLERIKHIVKQI---DTALDEDLM-------EMPIPTS--- 896
Query: 906 SVFPALPDMSPKKVSATHNVYVSPL-----RTSKMDALISH 941
++P +V T NV + L + S+ + ISH
Sbjct: 897 ------HGLAPVRVYLTQNVSIQVLPRTQYKESRQERAISH 931
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 484 GSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE-AQVLHAKNLTSLLTNERFHRCML 542
G M N + R+ E K++ +E + AE A+ + ++L +++ E F +
Sbjct: 541 GESSQMTFMTNFHLDLRK-ELEKVFLIFMEKIIVAEVAKKVREEDLVNVVRREEFLNSVF 599
Query: 543 ACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEER 602
ELVL ++ FP + F KVI+ I HE+ L R++ +H + +EE
Sbjct: 600 CFCVELVLFSN-GYDRPFPWSADVCNCHPFMFHKVIDLMISHEKRLSRQMVQHFSRIEEN 658
Query: 603 LLESMVWEKGSSMYN 617
++E W+ S ++
Sbjct: 659 VIEYYAWKSDSPLWQ 673
>gi|340500363|gb|EGR27249.1| hypothetical protein IMG5_199290 [Ichthyophthirius multifiliis]
Length = 143
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 779 FQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVF 838
+ IL ++ L NRHIDQ+ILCC Y KI ++N+ F+ II Y Q + R +
Sbjct: 1 MKHILGNQSELLINRHIDQLILCCIYSYCKICKINILFKSIIQVYENLNQHNSNMIRELI 60
Query: 839 VDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNND-- 896
D + DI+T YN IF+ +VK ++ TA N +E+ +N +
Sbjct: 61 YDMPLGENNKTG-----DIVTLYNNIFIQSVKNYIL-----NTAKNINSTNEIINNTNQI 110
Query: 897 ------GPCPGSPKVSVFPA 910
P SP S+ P+
Sbjct: 111 KNPAITTPIFTSPLKSMLPS 130
>gi|195347468|ref|XP_002040274.1| GM19021 [Drosophila sechellia]
gi|194121702|gb|EDW43745.1| GM19021 [Drosophila sechellia]
Length = 799
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNER----FHRCMLACSAELVLAT 552
A+ R A ++ +L+ + AE + +L LL + F+ ++AC ELVL
Sbjct: 432 AKSRFQLAKSFFFYLLDQILQAEIRNKPDIDLKRLLVQKVSLVIFNITLMACCVELVLEA 491
Query: 553 HKTVTMLFPAVLERTGITAFDLSKVIESFIRH---EESLPRELRRHLNSLEERLLESMVW 609
+KT + FP VL+ I+AF+ K+IE +RH E L R L +HLNS+EE LE + W
Sbjct: 492 YKT-ELKFPWVLDCFSISAFEFQKIIEIVVRHGSHEGCLNRSLIKHLNSIEETCLERLAW 550
Query: 610 EKGSSMYNSLTVAR 623
+ S++++ + A+
Sbjct: 551 ARNSTVWDMIASAQ 564
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQI 798
A + IF K+ L +RI + L L ++ ES++ +F+ + T L +RH+DQ
Sbjct: 578 AAGALQIFLRKVYLLGWLRIQKLCSELSLCEKTPESIWHIFEHSITHETDLMKDRHLDQN 637
Query: 799 ILCCFYGVAKISQL-NLTFREIIYNYRKQPQCKPQVFRSVFVD 840
I+C Y ++ ++ + F +I+ YR QPQ V+R VF+D
Sbjct: 638 IMCAIYIYIRVKRMEDPKFSDIMRAYRNQPQAVNSVYREVFMD 680
>gi|402579712|gb|EJW73663.1| hypothetical protein WUBG_15426, partial [Wuchereria bancrofti]
Length = 209
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 507 LYYRVLEAMCTAEAQVLHAKN---LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAV 563
L++R L + +E L + + L+++L E F + + C+ +LVL T+++V FP
Sbjct: 44 LFFRFLHKIALSEKDRLGSGSIVKLSAVLLREDFLKALYVCALQLVLFTYESVRE-FPWS 102
Query: 564 LERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
LE + A KVIE IR + SL RE+ +HLN +EER+LE W S ++ SL
Sbjct: 103 LEIMRLPAIHFYKVIELIIRADSSLSREMVKHLNKVEERVLEEFAWSLDSPLWPSL 158
>gi|308498181|ref|XP_003111277.1| CRE-LIN-35 protein [Caenorhabditis remanei]
gi|308240825|gb|EFO84777.1| CRE-LIN-35 protein [Caenorhabditis remanei]
Length = 937
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 17/143 (11%)
Query: 754 AAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLN 813
AA R+ + +R+ + + + + LF +L T +F +RHIDQIILCC + + +I++
Sbjct: 730 AARRLQELTDRVSMGTRGKSQCWSLFDYLLRNDTLVFMDRHIDQIILCCVFVILRINESP 789
Query: 814 LTFREIIYNYRKQPQCKPQVFRSV-----FVDWASAR------------QSGRSEQDHVD 856
+TF EI+ YR+Q Q++R V +D ++ ++ R VD
Sbjct: 790 ITFTEILAQYRRQSTQAMQIYRHVPVFAQLLDGSNPSDLNTKETILERLEAPRKFTCKVD 849
Query: 857 IITFYNKIFVPAVKPLLVELGPA 879
II FYN F +K ++ ++ A
Sbjct: 850 IIKFYNIEFRDRIKFIIGQIDSA 872
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 121/319 (37%), Gaps = 57/319 (17%)
Query: 331 LNILEKDYDNATRNKGELDERVFI---NEDDSLLGSGSLSGGAVNITGAKRKFDSLASPV 387
+N+ + YD +G +DERVFI N ++ +S + + + R F A +
Sbjct: 343 INVPKLAYDQYVLQRGNIDERVFIPTHNRFPAIFKEDFISASVLKKSFSGRPFRD-AEFL 401
Query: 388 KTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELER 447
TI SS IA G T+ V+ P P AE
Sbjct: 402 STI--------SSNQCLEKIAHGKTAAEKVSQSKER--------------PKVPCAEYSL 439
Query: 448 FL-KSCDKDVTTDVMRR-AHIILEAIFPSSGLGERC------------------------ 481
L K D+D +V +R II +S L E C
Sbjct: 440 ELGKYSDEDEAEEVHKRLVRIIGNWNLDTSKLQEACERMSDNPMATILLKCDELTSKFER 499
Query: 482 VTGSLQGA---NLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQV-LHAKNLTSLLTNERF 537
G+ G + M + + +Q R E K + +E + E + + ++L +++ E F
Sbjct: 500 TVGAEHGETNDSSMLSKFHKQLRNELEKSFLIFIEKIIVTEVKKKVREEDLLTVIRREEF 559
Query: 538 HRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
+ ELVL ++ FP + F KVI+ I HE+ L R++ +H +
Sbjct: 560 LGAVFCFCIELVLCSN-GYDREFPWSAKLCACHPFMFHKVIDLMISHEKRLSRQMIQHFS 618
Query: 598 SLEERLLESMVWEKGSSMY 616
+EE ++ W+ S M+
Sbjct: 619 KIEESIITYYAWKFESPMW 637
>gi|194745039|ref|XP_001955000.1| GF18553 [Drosophila ananassae]
gi|190628037|gb|EDV43561.1| GF18553 [Drosophila ananassae]
Length = 786
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
A++R A LYY++++ + T+E + ++ L+ + +LAC E+ L H
Sbjct: 421 ADERFRLASGLYYKLIDKIVTSEIALKPWLKISKLIKQPTLNETLLACCLEVALHVHHED 480
Query: 557 T--MLFPAVLERTGITAFDLSKVIESFIRHEESL-PRELRRHLNSLEERLLESMVWEKGS 613
+ FP +L+ + A+D K++E +RH++ L REL +HL++LEE L S+++ K S
Sbjct: 481 VDGLKFPFILDCYSLEAYDFQKILEVVVRHDQGLLGRELVKHLHALEEECLGSLIFRKNS 540
Query: 614 SMYNSLTVA 622
++ S A
Sbjct: 541 QLWRSFGKA 549
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 722 AFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQ 781
A P + G+ A TG I K +LA R+ + + + L +
Sbjct: 549 ALHLPGYQDVQAEGKENASTGAEICLRKFYELAKRRLFVLCQSIGLVDNFARIWHLAEHS 608
Query: 782 ILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDW 841
+ L R +DQ++LC + A++ +L LTF II +YR+QP + V+R+V ++
Sbjct: 609 FTTKGGQLLRQRSVDQLLLCAIHLHARLEELRLTFSAIIQHYRRQPHARSSVYRAVAMN- 667
Query: 842 ASARQSGRSEQDHVDIITFYNKIFV 866
Q+G DII FYN+I+V
Sbjct: 668 --DGQTG-------DIIRFYNRIYV 683
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 46/267 (17%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQF--LVKSGPILSNIYGADWENRLEAKELQANFVHLSI 161
+L +LR K+N+ F + + + L ++ L +LE +ELQ
Sbjct: 99 LSLTRLLRSFKVNVSQFLRRMEHWNWLAQNEGTL----------QLEVEELQRRLGITLT 148
Query: 162 LSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHAFSRFKDL 219
L K YK I+ + F+ + D ++ A S Y FGWLLFL +R + F+
Sbjct: 149 LRKHYKHIFEKLFVQPAEDADSEAVALYMSLY-----EFGWLLFLVIRNELPGFA----- 198
Query: 220 VTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRK 279
T+ LVS +L+ + + + N S +++ GV +D SED
Sbjct: 199 ---TSSLVSGCQVLVCSMDLLYVNVLEVSRSEVIRRDFAGVP------PKWD-SEDFDST 248
Query: 280 IMEKTNTL--IADILKKKPCEASECKSEN----------LENIDTDGLIYFENLMDDSSL 327
++ K + L I D++ + P + + +++I I+ ++ + L
Sbjct: 249 LLTKYSALEAIVDLIPQLPAKGVTQMKKAFFHKALMVLFMDHILLGNNIHMREIVKEGML 308
Query: 328 SSSLNILEKDYDNATRNKGELDERVFI 354
+L L + YD + E+DERV +
Sbjct: 309 DVNLGTLNRKYDTHVADISEMDERVLL 335
>gi|312371805|gb|EFR19899.1| hypothetical protein AND_21621 [Anopheles darlingi]
Length = 1037
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 71/266 (26%)
Query: 753 LAAVRINAMVERLQLSQQIRES-VYCLFQ-QILNQRTSLFFNRHIDQIILCCFYGVAKIS 810
+A R+ + + L L I ++ ++ +F+ I + L +RH+DQ+++C + +I
Sbjct: 755 VAYARLKDLCQSLGLDSTIIQTLIWTIFEYAITHNAKELMRDRHLDQLLMCSIFVTIRIK 814
Query: 811 QLNLTFREIIYNYRKQPQCKPQVFRSVFV-DWASARQSGR-------------------- 849
+L TF++I+ Y+KQPQ ++RSVF+ D ++ +S +
Sbjct: 815 KLQNTFKDIMSCYQKQPQSSSSIYRSVFIRDKPASPESAQPAASGDASNGAQGDGNGSEE 874
Query: 850 ------------------------SEQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKT 885
+ Q+ DII FYN I+V V P ++ A M++
Sbjct: 875 QQQQQQQQQERVPISAMAGTSVEYNRQEFGDIIKFYNDIYVKIVHPFAIKYYNAD--MQS 932
Query: 886 NRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVSATHNVYVSPLRTSKMDALISHSSKS 945
+S P P + ++ SP+++ A N+YVS T K + L+ +
Sbjct: 933 LFLS--------PTPRAQPRNIH-----KSPRQIRANINLYVS--TTDKTNTLLDSPNAH 977
Query: 946 YYACVGESTHAYQSPSKDLTDINHRL 971
Y +QSP+KDL +N R+
Sbjct: 978 TYTF-------HQSPAKDLELLNQRV 996
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 113/586 (19%), Positives = 226/586 (38%), Gaps = 94/586 (16%)
Query: 76 WFAFVLYLVR----RLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVKS 131
W LY+ R + N + QG N ++ ++L+ +NI +FF ++ +
Sbjct: 86 WMCCSLYVAGLQEIRPTVGNPDRYFQG---NGVHITNLLKQCGINIQEFFIKINDW---- 138
Query: 132 GPILSNIYGADWENRLEAKELQANFV----HLSILSKSYKRIYREFFLPSDANGDKQSAA 187
S+I + + LQ F + ++ + RI+ + L + + A
Sbjct: 139 ----SSITSLPARLKSQIDNLQHEFTVAIGAYTAFNEDFPRIFNDTALTPEEPKRNKKAK 194
Query: 188 ASTSGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFR----N 243
+ Y + F W+LFL ++ + +D T N V ++ ++ +V R N
Sbjct: 195 PNPCSY-NRLREFSWVLFLCVKEQHQEQRRDRTTVMNLAVCVMDLIYRNVVAEERLELLN 253
Query: 244 FNI----------------HDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTL 287
N+ + + ++++ ++IA LCS Y T D + E T+
Sbjct: 254 PNMLIPVSGADGVAGGSTADGGTAALLEASRQNNIIAMLCSEYPTCSD---SVAETNRTI 310
Query: 288 IADILKKKPCEASECKSENLENI-------DTDGLIYFENLMDDSSLSSSLNILEKDYDN 340
P S +++L D D F NL+ + +L L + Y+
Sbjct: 311 FL------PTLGSMFGTKDLRGTRKSSATGDGDEEEQFLNLLTVGNFDENLKSLNRRYER 364
Query: 341 ATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSS 400
+G LDER+ +N + + + +L + + +T+ P +
Sbjct: 365 YILQRGMLDERIALN---TRMTNSNLRQRWCVTNHPRTPLSVKSLAGRTMPMPAGINEYP 421
Query: 401 ASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDV 460
AS N + T ++ + P +P LKSC + V
Sbjct: 422 ASGSNALVLRGTLNQLMKKIQGHK-------------PGQPRDSFLNLLKSCAPNPLAMV 468
Query: 461 MRRAHIILEAIFPSSGLGERCVTGSL--QGANLMDNIWAEQRRLEALKLYYRVLEAMCTA 518
+ R + + A F G L +G N + AE R LYY+++E +
Sbjct: 469 LERV-VRMRARF----------VGRLTQEGWNARN---AEARFDNIEALYYQLVENIIPW 514
Query: 519 E----AQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 574
E + +K + + N+ F+ + C+AE+++ + FP +L + D
Sbjct: 515 ERRKRTNLTPSKVIYEMCANDLFNETAIVCAAEIIIRLRQEQNS-FPWILGVFEMQPLDF 573
Query: 575 SKVIE-SFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 619
++IE + + + E L ++ HL +EE++++S+ W + S ++ +
Sbjct: 574 YRIIEVTVVANSEILTTDIVNHLRRVEEQVIDSLCWTRSSVLWEKM 619
>gi|387204880|gb|AFJ69035.1| retinoblastoma-like protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 96
Score = 68.6 bits (166), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 515 MCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDL 574
M E L ++ +LL + FHR +LAC +++ VT+ VL+ + A+DL
Sbjct: 1 MLDRETDRLRRRDHGALLRHPTFHRALLACCLQVLAKALSLVTLSLGRVLQICELQAYDL 60
Query: 575 SKVIESFIRHEESLPRELRRHLNSLEERLLESMVWE 610
K +ESF++ LP LR HL +EE++LESM W+
Sbjct: 61 FKALESFVKASPGLPSLLRLHLIEVEEQILESMAWQ 96
>gi|348500300|ref|XP_003437711.1| PREDICTED: retinoblastoma-like protein 2-like [Oreochromis
niloticus]
Length = 403
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 503 EALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPA 562
EA Y+R+LE + + E + L +++ +L ++ F RC++AC E+ + T ++ FP
Sbjct: 25 EAGVWYHRILENLISQERKRLGFSDISGILEHDLFQRCLVACCLEIAV-TSNSLPCDFPL 83
Query: 563 VLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
+L+ + + KVIE R LP + HL +EE++LE++ W S +++ +T
Sbjct: 84 LLQILKLAPYHFWKVIEPVWRVGSGLPHYVVTHLIQVEEKVLENLAWTSDSPLWDEIT 141
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%)
Query: 749 KINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAK 808
++ L A R+ + L++S ++R ++ F+ L + L +RH+DQ+++C Y +AK
Sbjct: 152 QVYSLMAKRLRELCSTLEISDELRLKIWTCFEYSLVHCSCLMVDRHLDQLLMCAIYIIAK 211
Query: 809 ISQ 811
+ +
Sbjct: 212 VCK 214
>gi|195110157|ref|XP_001999648.1| GI22956 [Drosophila mojavensis]
gi|193916242|gb|EDW15109.1| GI22956 [Drosophila mojavensis]
Length = 792
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQI 798
A + I K +A R+ + + L L + + L I+ L RH+DQ+
Sbjct: 571 ASGSVTICLRKFYHVANQRLTYLCKCLSLVTSYTQIWHILEHSIIVHGEELLQQRHLDQL 630
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C Y + S L +TF +II YR+QP ++R+V+ Q DII
Sbjct: 631 LICAIYLWGRKSHLRITFSDIIQQYRRQPHADSAIYRAVYCA---------DGQPTTDII 681
Query: 859 TFYNKIFVPAVKPLLVEL--GPAGTAMKTNRVS----EVNHNNDGPCPGSPKVSVFPA 910
+FYN++++P + V L G + A +T S E++ NN+ S V+V PA
Sbjct: 682 SFYNRVYIPLMADYAVALQCGQSDAARETVATSRPLQELSGNNNKRRLKS-NVTVSPA 738
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTN--ERFHRCMLACSAELVL---ATHKTVTMLFP 561
LYY +L+ + AE + + + +L F+ ++AC ELVL T +T T FP
Sbjct: 431 LYYVLLDKIVGAELRRRPSIKIAQMLKQLQRTFNATLIACCLELVLHIFGTDETQTK-FP 489
Query: 562 AVLERTGITAFDLSKVIESFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
VL GI A++ K+IE +RHE L R+L +HL +E + L ++W+K S ++
Sbjct: 490 WVLNCFGIDAYEFQKIIELVVRHESGLLTRDLIKHLQEIETQCLTKLIWQKSSQLW---- 545
Query: 621 VARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLS 658
R V SA + R D SL ++ F+SG ++
Sbjct: 546 --RYVDSAGLPR---FQDVQSSLG--QENVKFASGSVT 576
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 22/126 (17%)
Query: 88 SEKNGENLQQGSNDNEFN--LCHILRVMKLNIVDFFKELPQF--LVKSGPILSNIYGADW 143
S+ + E ++ + N +N L +LR +NI F K + + + +S +
Sbjct: 78 SDNDLEPWEKKTRSNSWNISLTQLLRSFNINITKFLKRMEHWNWIAQSSEVFQQ------ 131
Query: 144 ENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWL 203
E +L+ +L + YKRI+ + ++ Q + A + + + FGWL
Sbjct: 132 ----EINDLERRLGITLLLQQHYKRIFNQLYV--------QPSTAESRAHYQMLYEFGWL 179
Query: 204 LFLALR 209
LFL +R
Sbjct: 180 LFLVVR 185
>gi|125776429|ref|XP_001359274.1| GA18648 [Drosophila pseudoobscura pseudoobscura]
gi|54639017|gb|EAL28419.1| GA18648 [Drosophila pseudoobscura pseudoobscura]
Length = 781
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 732 GGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFF 791
G G E A TG I CK LA R+ + + L L + + + Q L
Sbjct: 552 GSGPEEKARTGFVICLCKFYCLANQRLVNLCQSLVLMEHFPKIWLIAEHSFIQQGGDLLK 611
Query: 792 NRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE 851
R++D +++C + A++ +L L F +I+ +YR QP + +V+R+V + QSG
Sbjct: 612 QRNLDHLLICAIHLHARLKRLRLNFSQILQHYRWQPHARREVYRAVPL---GDGQSG--- 665
Query: 852 QDHVDIITFYNKIFVPAVK 870
DII FYNK++V +++
Sbjct: 666 ----DIIDFYNKVYVKSME 680
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 504 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH--KTVTMLFP 561
A +LYY++L+ + ++E + + LL ++AC EL L + + FP
Sbjct: 412 ACRLYYQLLQRIISSELLLKPHLKMVQLLKQRTLSFTLVACCLELALRIREDRVEELKFP 471
Query: 562 AVLERTGITAFDLSKVIESFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
+L+ + A++ K++E +RH L R+L +HL ++E+ L S+++ SS + L
Sbjct: 472 FILKCYSLDAYEFQKILELVVRHRTGLMGRDLIKHLQAVEDECLGSLMFRGDSSFWKILG 531
Query: 621 VARPVLSAE 629
A+ V S +
Sbjct: 532 KAQRVPSCK 540
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 47/273 (17%)
Query: 98 GSNDNEFNLCHILRVMKLNIVDFFKELPQF--LVKSGPILSNIYGADWENRLEAKELQAN 155
G++ +L +L K+NI F + + Q+ LVK+ + E +L
Sbjct: 91 GTSCWNLSLTKLLAAFKVNINQFMERMKQWNVLVKNEKVFQQ----------EIDDLHRR 140
Query: 156 FVHLSILSKSYKRIY-REFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHA 212
I+ K Y+R++ R F LP + + ++ + TS Y FGWLLFL +R +
Sbjct: 141 LCMTLIIRKHYQRLFDRLFVLPEEDTENVEARSIHTSLY-----EFGWLLFLTIRNELPG 195
Query: 213 FSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDT 272
F+ T+ LVS +LI + + + N ++ + ++ GV S D
Sbjct: 196 FA--------TSNLVSGCQVLICTLELLYVNALEMGNAWVINRTFPGV---PSKWGSDDF 244
Query: 273 SEDDLRKI--MEKTNTLIADILKK----------KPCEASECKSENLENIDTDGLIYFEN 320
+ L K +E+ +LI D+ +K +NL DT +
Sbjct: 245 DDGLLLKYSALEEICSLIPDLPRKGVRVMKNAFFHKALVVLFSDQNLLGNDT----FMRE 300
Query: 321 LMDDSSLSSSLNILEKDYDNATRNKGELDERVF 353
++ + L +L L ++Y N + E+DER
Sbjct: 301 IIKEGLLDVNLATLNRNYTNHVADISEIDERFL 333
>gi|449669985|ref|XP_004207166.1| PREDICTED: retinoblastoma-like protein 1-like [Hydra
magnipapillata]
Length = 601
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 59/284 (20%)
Query: 558 MLFPAVLERTGI-----TAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKG 612
+LF +LE + +A DLS +IE IR ++ L R++ +HL+ +EE++LE++ W+ G
Sbjct: 348 VLFYKILEDFFVEEKKKSAADLS-IIELVIRGQD-LSRDVIKHLSKIEEQILETLSWKSG 405
Query: 613 SSMYNSLTVARPVLSAEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQ 672
S ++ ++ + E+ ++ PM + + +N SP+ S+ + P
Sbjct: 406 SPVFTAIESHGVPICQEVAPDHCVSAPMFFISPTSLRLNKDGVEQSPIISIRDRFSLPVS 465
Query: 673 NGDIRSPKRPCTDYRSVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPG 732
SP + RN F S +++ + +L S Q AS T P
Sbjct: 466 ----ASPAK-----------RNLFGSSLQNETQSVVSLSS-------QHFSASATVP--- 500
Query: 733 GGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFN 792
A+ +++ + L ++ F+ L + +
Sbjct: 501 ---------------------ASPKVSVLKNHLYFR------IWTCFEHSLVSNIDMLRD 533
Query: 793 RHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRS 836
RH+DQ+++C Y ++K++ + +FREI+ YR QPQ V +S
Sbjct: 534 RHVDQLLMCAIYIMSKVTNEDKSFREIMKWYRTQPQASSDVTKS 577
>gi|158295912|ref|XP_316517.4| AGAP006477-PA [Anopheles gambiae str. PEST]
gi|157016260|gb|EAA11652.4| AGAP006477-PA [Anopheles gambiae str. PEST]
Length = 918
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 105/546 (19%), Positives = 222/546 (40%), Gaps = 70/546 (12%)
Query: 102 NEFNLCHILRVMKLNIVDFFKELPQFL-VKSGP-----ILSNIYGADWENRLEAKELQAN 155
N N+ ++L + I +FF ++ Q+ ++S P + N++ E +
Sbjct: 76 NGVNITNLLTQCDIKIQEFFSKMKQWSEIRSLPGRLRTAVDNLH----------HEFSVS 125
Query: 156 FVHLSILSKSYKRIYREF-FLPSDANGDKQSAAASTSGYISDYHR---FGWLLFLALRIH 211
++ + + RI+ E +P + +K+S S Y+R F WLLFL ++
Sbjct: 126 ITTYTVFGEDFPRIFNEANIVPDEPKRNKKSKPNPCS-----YNRLREFSWLLFLTVKEQ 180
Query: 212 AFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIH------------DSSRFVKKSNKG 259
+ +DL T + V ++ ++ +V R ++ D + ++
Sbjct: 181 HREQRRDLATAMDLCVCVMDLIYRNVVADGRMDLVNPKVLQEGGSSSVDGTTAAAEAALK 240
Query: 260 VDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFE 319
+++ LC+ Y T+ + + ++TN + P +S ++ +L F
Sbjct: 241 INVREQLCNEYPTTSESV----DETNRSVF-----LPALSSMVEANDLRGTRAPDGQSFL 291
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRK 379
L+ ++ +L +L + Y+ G LDER+ ++ S + + +VN+ G R
Sbjct: 292 GLVSVANFEDNLKLLNRRYERCILRCGMLDERIALSSRSS--PTSQRNRWSVNVAGPPRT 349
Query: 380 FDSLASPVKTITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPS 439
SL S + R G A G + +P T ++ ++ + P
Sbjct: 350 PLSLKSGRTGGGGGVGMVRGIRV---GFANGGPEQSSGSPFVVRGTLSQLMKRIRGHEPG 406
Query: 440 KPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQ 499
P +K+C V+ + + +R L D
Sbjct: 407 SPRGTFLTLMKNCTPSPLGTVLEHVDRM------RARFVKRLTEQEGWKLALADC----- 455
Query: 500 RRLEALK-LYYRVLEAMCTAEAQ----VLHAKNLTSLLTNERFHRCMLACSAELVLATHK 554
R +A++ LYY++LE + E + + ++ + L +N F+ ++ C+AE++ +
Sbjct: 456 -RFDAVEALYYQLLENIIPWELKKRPSMTVSRVIYDLCSNAFFNETVIVCAAEIIFFLRQ 514
Query: 555 TVTMLFPAVLERTGITAFDLSKVIE-SFIRHEESLPRELRRHLNSLEERLLESMVWEKGS 613
FP +LE G+ F +IE + + + L ++ HL +EE+L++S+ W+ S
Sbjct: 515 E-QHNFPWILEVFGMEPFRFFHIIEVTVTANNDILTSDIVNHLRRIEEQLVDSISWKSSS 573
Query: 614 SMYNSL 619
++ +
Sbjct: 574 VLWECM 579
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASA 844
L +RH+DQ+++C + +I +L TF++I++ Y QPQ ++RSVF+ + SA
Sbjct: 650 LMRDRHLDQLLMCAIFVTMRIKKLPNTFKQIMHCYHSQPQANSSIYRSVFIRYESA 705
>gi|195389132|ref|XP_002053231.1| GJ23772 [Drosophila virilis]
gi|194151317|gb|EDW66751.1| GJ23772 [Drosophila virilis]
Length = 792
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 739 AETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQI 798
A INI K LA R+ + + L L + + L I+ L RH+DQ+
Sbjct: 569 APGAINICLRKFYHLANQRLAYLCKCLSLLASYTKIWHILEHSIIVHGYELLRERHLDQL 628
Query: 799 ILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDII 858
++C Y + QL ++F +II YR+QP + ++R+V + Q + DII
Sbjct: 629 LMCAIYLCVRKGQLRISFSDIIQQYRRQPHAQSAIYRAVHLA---------DGQPNTDII 679
Query: 859 TFYNKIFV 866
TFYN+++V
Sbjct: 680 TFYNRVYV 687
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTN--ERFHRCMLACSAELVLATHKT--VTMLFPA 562
LYY++L+ + AE + L LL F+ ++AC +LVL + + FP
Sbjct: 429 LYYQLLDKIIAAELRRRPTIKLAQLLIQLQRTFNVALIACCLQLVLHIFEAQDTQLKFPW 488
Query: 563 VLERTGITAFDLSKVIESFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMY 616
+L+ I ++ K+IE +RHE L R+L +HL+ +E + L S++W+ S ++
Sbjct: 489 LLKCFNIDPYEFQKIIELVVRHECGLLTRDLIKHLHDIEAQCLTSLIWQNNSQLW 543
>gi|195152251|ref|XP_002017050.1| GL22085 [Drosophila persimilis]
gi|194112107|gb|EDW34150.1| GL22085 [Drosophila persimilis]
Length = 781
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 732 GGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFF 791
G G E TG I CK LA R+ + + L L + + + Q L
Sbjct: 552 GSGPEEKPRTGFVICLCKFYCLANQRLVNLCQSLVLMEHFPKIWLIAEHSFIQQGGDLLK 611
Query: 792 NRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSE 851
R++D +++C + A++ +L L F +I+ +YR QP + +V+R+V + QSG
Sbjct: 612 QRNLDHLLICAIHLHARLKRLRLNFSQILQHYRWQPHARREVYRAVPL---GDGQSG--- 665
Query: 852 QDHVDIITFYNKIFVPAVK 870
DII FYNK++V +++
Sbjct: 666 ----DIIDFYNKVYVKSME 680
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 504 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH--KTVTMLFP 561
A +LYY+ L+ + +E + + LL ++AC EL L + + FP
Sbjct: 412 ACRLYYQFLQRIIGSELLLKPHLKMVQLLKQRTLSVTLVACCLELALRIREDRVEELKFP 471
Query: 562 AVLERTGITAFDLSKVIESFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
+L+ + A++ K++E +RH L R+L +HL ++E+ L S+++ SS + L
Sbjct: 472 FILKCYSLDAYEFQKILELVVRHRTGLIGRDLIKHLQAVEDECLGSLMFRGDSSFWKILG 531
Query: 621 VARPVLSAE 629
A+ V S +
Sbjct: 532 KAQRVPSCK 540
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 49/272 (18%)
Query: 98 GSNDNEFNLCHILRVMKLNIVDFFKELPQF--LVKSGPILSNIYGADWENRLEAKELQAN 155
G++ +L +L K+NI F + + Q+ LVK+ + E +L
Sbjct: 91 GTSCWNLSLTKLLAAFKVNINQFMERMKQWNVLVKNEKVFQQ----------EIDDLHRR 140
Query: 156 FVHLSILSKSYKRIY-REFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHA 212
I+ K Y+R++ R F LP + + ++ + TS Y FGWLLFL +R +
Sbjct: 141 LCMTLIIRKHYQRVFDRLFVLPEEDTENVEARSIHTSLY-----EFGWLLFLTIRNELPG 195
Query: 213 FSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDT 272
F+ T+ LVS +LI + + + N ++ + + GV D
Sbjct: 196 FA--------TSNLVSGCQVLICTLELLYVNALEMGNAWVINRRFPGVPRKWG----SDD 243
Query: 273 SEDDL---RKIMEKTNTLIADILKK----------KPCEASECKSENLENIDTDGLIYFE 319
+D L +E+ +LI D+ +K +NL DT +
Sbjct: 244 FDDGLLLRYSALEEICSLIPDLPRKGVRVMKNAFFHKALVVLFSDQNLLGNDT----FMR 299
Query: 320 NLMDDSSLSSSLNILEKDYDNATRNKGELDER 351
++ + L +L L ++Y N + E+DER
Sbjct: 300 EIIKEGLLDVNLATLNRNYTNHVADISEIDER 331
>gi|241573931|ref|XP_002403233.1| tumor suppressor p130, putative [Ixodes scapularis]
gi|215500199|gb|EEC09693.1| tumor suppressor p130, putative [Ixodes scapularis]
Length = 574
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 86/278 (30%)
Query: 763 ERLQLSQQ-IRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIY 821
+RL + Q+ IR ++ F+ + L +RH+DQ+ILC Y + K++++ +F+EI+
Sbjct: 284 QRLGIQQKDIRLKIWTCFEHSIVNHIELMKDRHLDQLILCAVYVITKVTRVEKSFQEILQ 343
Query: 822 NYRKQPQCKPQVFRSVFV--------------------------------DWASARQS-- 847
YR+QPQ K V+RSV + + S R S
Sbjct: 344 CYRQQPQNKSHVYRSVLLRKSAGHSDHSSRTGSNSSSPVTVENEDGGEHHQFCSTRSSST 403
Query: 848 -----------------GRSEQDHVD----IITFYNKIFVPAVKPLLVELGPAGTAMKTN 886
G + Q D II FYN+I+ + + P
Sbjct: 404 LPLLPPNSQPPTPTRLAGTATQFEFDERGDIIKFYNEIYRKRMTTFATKFSPD------- 456
Query: 887 RVSEVNHNNDGPCPGSPKVSVFPALPDM--SP-KKVSATHNVYVSPLRTSKMDALISHSS 943
++ N+ C ++ P M SP ++VS +V+VSPL+ H
Sbjct: 457 -----SNKNEAMC-----LTPLPRSKCMLNSPRRRVSYNRDVFVSPLKAGSYPVSPKH-- 504
Query: 944 KSYYACVGESTHAYQSPSKDLTDINHRLNSNRRVRGTL 981
+ H QSP+KDL IN + + V L
Sbjct: 505 --------HTYHFNQSPAKDLRAINQMVQGSDNVSKRL 534
>gi|312094649|ref|XP_003148094.1| hypothetical protein LOAG_12534 [Loa loa]
Length = 465
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 217/526 (41%), Gaps = 88/526 (16%)
Query: 94 NLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFL-VKSGPILSNIYGADWENRLE--AK 150
NL + + +++L +LR+ K+++++FF + +++ + +GP RL+
Sbjct: 5 NLFEHAVPKKYSLAKLLRICKISVLEFFDKATKWVEMINGP-----------RRLKDHIN 53
Query: 151 ELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALRI 210
+Q++ +++ K I+R+ F P +N D S + + W LF+ +R
Sbjct: 54 RVQSSLAVAAVVFKKLLPIFRKIFAPPCSNDDDNSKDLNCKKLFT----LLWTLFIVMR- 108
Query: 211 HAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRF--------VKKSNKGVDL 262
+F ++ L++ +L+ V F++ + + ++ + +
Sbjct: 109 ---KQFN-----SDDLMNSFHLLLCTVDFIFQDLRRSEMASLLDGDFINAIEMQPEEDSI 160
Query: 263 IASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSENLENIDTDGLIYFENLM 322
+ +LC I++ D + + + + +++ E S E+L N + LI + L
Sbjct: 161 LETLCQIFEGVVLDAKHF--RAHCWLPR-MRRMSEEKSIETGEHLTNFAANELINKKKL- 216
Query: 323 DDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDS 382
DS Y+ +GE+DER+F+ D S++ + AV DS
Sbjct: 217 -DSM-----------YEELIVKRGEMDERMFLPADISVVFDEAYDECAVQRLRHSEDGDS 264
Query: 383 LASP-------VKTITSPLSPHRSSAS--HPNGIAGGATSKMVVTPVSTAMTTAKWLRTV 433
L ++ L R + G A TPVS ++ A L +
Sbjct: 265 LVDADMLLRLSTQSCLERLQDQRQQRTPLTGRGYVISAEQYCPATPVSASLYNASRLEVL 324
Query: 434 ICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMD 493
+ + AE+E L +D +M +I+ S L ER ++
Sbjct: 325 LQDSWRRLDAEVESILCHSCQDPFGKIM---NIV-------SQLSER-----------LE 363
Query: 494 NIWAEQRRLEALKL--YYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLA 551
+ +R+L+ +R + A+ + L +++L E F + + CS +LVL
Sbjct: 364 EVIENERQLDGADYDASFREMFAIRKNNTECL----FSAVLLREDFLKALYVCSLQLVLF 419
Query: 552 THKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLN 597
T+++V FP LE + A KVIE IR + SL RE+ +HLN
Sbjct: 420 TYESVRE-FPWSLETMHLPAIHFYKVIELIIRADSSLSREMVKHLN 464
>gi|195328575|ref|XP_002030990.1| GM24273 [Drosophila sechellia]
gi|194119933|gb|EDW41976.1| GM24273 [Drosophila sechellia]
Length = 782
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 142/640 (22%), Positives = 238/640 (37%), Gaps = 137/640 (21%)
Query: 19 GDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFA 78
GD D R + C+ L ++E + + +R L +S + + E W
Sbjct: 8 GDADTLVRRFSVSCEQ-LDLEERIRQGALSTYRR-----LDAVSGLSTSEADAQE--WLC 59
Query: 79 FVLY------LVRRLSEKNGENLQQGSNDNE-------FNLCHILRVMKLNIVDFFKELP 125
+Y +R + E N E +ND+E +L +LR K+N+ F + +
Sbjct: 60 CAVYSELQRVKMRDIRESNNE-----ANDSEEQNFCWNMSLTSLLRSFKVNMSQFLRRME 114
Query: 126 QFLVKSGPILSNIYGADW----EN--RLEAKELQANFVHLSILSKSYKRIYREFFLPSDA 179
+ +W EN +LE +EL+ L + Y+ I+R F+
Sbjct: 115 HW--------------NWLTQNENTFQLEVEELRCRLGITLTLLRHYQHIFRCLFVQPGK 160
Query: 180 NGDKQSAAASTSGYISDYHRFGWLLFLALR--IHAFSRFKDLVTCTNGLVSILAILIIHV 237
+ D + + Y FGWLLFL +R + F+ +L+ LV + IL ++
Sbjct: 161 DADPDATYQYQALY-----EFGWLLFLVIRNELPGFAT-TNLINGCQVLVCTMDILFVNA 214
Query: 238 PVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSED--------DLRKIMEKTNTLIA 289
R+ I V K D L + Y E R +M+ N
Sbjct: 215 LELPRSVVIRREFSGVPKKWDTEDFNPVLLNKYSVLEALGELIPELPARGVMQMKNAFFH 274
Query: 290 DILKKKPCEASECKSENLENIDTDGLIYFENLMDDSSLSSSLNILEKDYDNATRNKGELD 349
L +C L DT + ++ + L +L L + Y N + E+D
Sbjct: 275 KALIM--LYMDQC----LLGDDT----HMREIIKEGMLDINLANLNRKYTNQIADISEMD 324
Query: 350 ERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP-HRSSASHPNGIA 408
ERV ++ GA+ K DS SP + LSP HR +H
Sbjct: 325 ERVLLS-----------VKGAIET-----KEDSPKSPQLAFQTSLSPSHRKLFTHD---- 364
Query: 409 GGATSKMVVTPVSTAMTTAKWLRTVICPLPSK-PSAELERFLKSCDKDVTTDVMRRAHII 467
LP P + ++ F K D D T + +
Sbjct: 365 ----------------------------LPKTLPLSIIKAFPKKEDADKTVNYL------ 390
Query: 468 LEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKN 527
L E T ++ + +D+ + +R +A L Y+ L+ + E
Sbjct: 391 ------DETLEEMNRTFTMAVKDFLDDELSRKRFRQARGLCYKYLQKILGPEMVQKPQLK 444
Query: 528 LTSLLTNERFHRCMLACSAELVLATHKTVT--MLFPAVLERTGITAFDLSKVIESFIRHE 585
+ L+ + +LAC EL L H + + FP VL + A+D K++E +R +
Sbjct: 445 IGQLIKKRKLTDALLACCLELALHVHHKLVEGLKFPFVLHCFSLDAYDFQKILELVVRCD 504
Query: 586 ES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
L REL +HL+ +EE L+S+++ K S ++ L P
Sbjct: 505 HGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWELKQRIP 544
Score = 60.1 bits (144), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L NRH+DQ++LC + ++ +L+LTF II +YR+QP + +R V + +G
Sbjct: 609 LLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHSRRSAYREVILG------NG 662
Query: 849 RSEQDHVDIITFYNKIFVPAV 869
++ DIITFYN ++V ++
Sbjct: 663 QT----ADIITFYNSVYVQSM 679
>gi|195501123|ref|XP_002097668.1| GE24354 [Drosophila yakuba]
gi|194183769|gb|EDW97380.1| GE24354 [Drosophila yakuba]
Length = 783
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L NRH+DQ++LC + ++ +L+LTF II +YR+QP + +V+R V V +G
Sbjct: 610 LLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHAQRRVYREVSVG------NG 663
Query: 849 RSEQDHVDIITFYNKIFVPAV 869
++ DIITFYN ++V ++
Sbjct: 664 QT----ADIITFYNSVYVQSM 680
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 477 LGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE---------AQVLHAKN 527
L E +T S+ + +D + +R +A LYY+ L+ + E Q++ +
Sbjct: 395 LQEMNLTFSIAAEDFLDAEVSAKRFRQAKGLYYKFLQKILVPELTQKPQLKIGQLIKQRT 454
Query: 528 LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEES 587
LT+ L L + + + FP VL + A+D K++E +R++
Sbjct: 455 LTAALLAC-------CLELALYVYDKQVEGLRFPFVLHCFSLDAYDFQKILELVVRYDHG 507
Query: 588 -LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
L REL +HL+ +EE L+S+++ K S ++ L + P
Sbjct: 508 FLGRELIKHLDVVEETCLDSLIFRKSSQLWWDLRQSLP 545
>gi|145541634|ref|XP_001456505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424317|emb|CAK89108.1| unnamed protein product [Paramecium tetraurelia]
Length = 886
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+N F ++ A +I + L+L +Q +E ++ + I++++T + +DQ++L
Sbjct: 584 MNRLFKRVLHYCAFQIQIICSNLKLQEQFQEYIWITIKYIISEKTDHLRHHSLDQVVLAS 643
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV--DWASARQSGRSEQDHVDIITF 860
Y V K++ L F++II Y + F V + S G DI+++
Sbjct: 644 IYAVTKLTGNQLKFQQIINAYEITNTWYSKQFIKKIVCNTYISNDSMG-------DIVSY 696
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN+ F+P +K ++++ T +K+N V + NN P + K+ P L D+ P++ +
Sbjct: 697 YNQSFIPQIKSFMLQM---STEIKSNNVPQSPMNNKNPALNN-KILDSP-LRDILPRQQT 751
Query: 921 ATHNVYVSPLRTSKMDALISHSSKSYYA 948
T N+ S+ L++ S++ YA
Sbjct: 752 FTSNL------QSQQAGLMTPSTQLLYA 773
>gi|194901176|ref|XP_001980128.1| GG16967 [Drosophila erecta]
gi|190651831|gb|EDV49086.1| GG16967 [Drosophila erecta]
Length = 780
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L NRH+DQ++LC Y ++ +L+LTF II +YR+QP + +V+R V + +G
Sbjct: 607 LLRNRHLDQLLLCAIYLHVRLEKLHLTFSIIIQHYRRQPHAQRRVYREVSLG------NG 660
Query: 849 RSEQDHVDIITFYNKIFVPAV 869
++ DII+FYN ++V ++
Sbjct: 661 QT----ADIISFYNSVYVQSM 677
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 114/538 (21%), Positives = 207/538 (38%), Gaps = 106/538 (19%)
Query: 104 FNLCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGADW----EN--RLEAKELQANFV 157
+L +LR K+N+ F + + + +W EN +LE +EL+
Sbjct: 94 MSLTRLLRSFKVNVSQFLRRMEHW--------------NWLTENENTFQLEIEELRRRLG 139
Query: 158 HLSILSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHRFGWLLFLALR--IHAFSR 215
L + YK I+R F+ + D + Y FGWLLFL +R + F+
Sbjct: 140 ITMTLLRHYKHIFRSLFVQPGKDADPDDLNHYQALY-----EFGWLLFLVIRNELPGFAT 194
Query: 216 FKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLCSIYDTSED 275
+L+ LV + +L ++ ++ I V K D +L + Y
Sbjct: 195 -TNLINGCQVLVCTMDLLFVNALEVAQSVVIRREFSGVPKKWDSKDFNPTLLNKYSA--- 250
Query: 276 DLRKIMEKTNTLIADILKKKPCEASEC---KSENLENIDTDGL---IYFENLMDDSSLSS 329
+E LI ++ K + K+ L +D + + ++ + L
Sbjct: 251 -----LEAMGELIPELPVKGVVQMKNAFFHKALMLLYMDHSLVGDDTHMRKIVKEGMLDI 305
Query: 330 SLNILEKDYDNATRNKGELDERVFINEDDSLLGSGSLSGGAVNITGAKRKFDSLASPVKT 389
+L L + Y N + E+DERV ++ K DS SP
Sbjct: 306 NLANLNRKYTNHVADISEMDERVLLS------------------VQRATKEDSQRSP--- 344
Query: 390 ITSPLSPHRSSASHPNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFL 449
P ++S+SH + K L + P PS +
Sbjct: 345 -----PPFQTSSSHSH----------------------KKLFSQDLPDTLPPS-----II 372
Query: 450 KSCDKDVTTDVMRRAHIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYY 509
K+ K+ D I++ ++ + L E +T ++ + +D + +R + LYY
Sbjct: 373 KAIQKEEDGDK------IMKYVYRT--LQEMNLTFTIAAKDFLDAEVSGKRFRQVRGLYY 424
Query: 510 RVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVT--MLFPAVLERT 567
+ L+ + E + L+ +LAC EL L + + + FP VL
Sbjct: 425 KFLQKILVPELAQKPQLKIGQLINQRTLTVALLACCLELALHVYDKLVEGLRFPFVLHCF 484
Query: 568 GITAFDLSKVIESFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
+ A+D K++E +R++ L REL +HL+ ++E L+S+++ K S ++ L P
Sbjct: 485 SLDAYDFQKILELVVRYDHGFLGRELIKHLDIVQETCLDSLIFRKSSQLWWDLKQRLP 542
>gi|47222553|emb|CAG02918.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 717 PPLQSAFASPTRPNPGGGGETCAETGINIFFCKINKLAAVRINAMVERLQLSQ-QIRESV 775
PP Q A + P RP +++F+ K+ +LA R+ + L S ++ +
Sbjct: 51 PPAQPA-SQPARP--------LKSNSLSLFYKKLYRLAYTRLKMLCSHLLFSHPELEPII 101
Query: 776 YCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQP 827
+ LFQ L L +RH+DQ+++C Y + K+ ++L F+ I+ Y+ P
Sbjct: 102 WTLFQHTLQHEHELMRDRHLDQLMMCAMYAICKVKIVDLRFKSIVTAYKNMP 153
>gi|403366548|gb|EJY83077.1| Retinoblastoma protein [Oxytricha trifallax]
Length = 1047
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 479 ERCVTGSLQGANLMDN---------IWAEQRRLEALKLYYRVLEAMCTAEAQVLHAKN-- 527
E C+T + L +N I+ +Q L +R+L+ + E + + +N
Sbjct: 443 ESCITKVIDLLALRENRKDDQRIKDIYYQQYGKSTKLLTFRILDELLIREQRTSNMQNAA 502
Query: 528 ---LTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRH 584
+ LL+ E F R C+ E V + + +L G+ AFDL +++ SF +
Sbjct: 503 EPDFSHLLSREIFLRSAFMCAVESVFFINMVKQVQINDLLPLVGLQAFDLWRLLHSFFKF 562
Query: 585 EESLPRELRRHLNSLEERLLESMVWEKGSSM 615
++ +P+ L H +E+R++ W GSS+
Sbjct: 563 DQQMPKSLIDHFRQIEQRIVSESAWASGSSV 593
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 29/176 (16%)
Query: 744 NIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCF 803
++FF ++ +A+ R+ + + L L++ + E ++ + + +L T L NRH+DQ+++C
Sbjct: 628 HMFFKRVLHVASQRVFDLGKALNLNEDVLEKIWIIMKLLLGHETQLLMNRHLDQLVMCTL 687
Query: 804 YGVAKIS-QLNLTFREIIYNY---RKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIIT 859
+ V ++ + +TF II Y ++ + V+ V + + DII
Sbjct: 688 FCVCRVHPETTITFVNIIDKYVELNREVRNMHNVYMHVVTNDGVKK----------DIIK 737
Query: 860 FYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHN---NDGP-CPGSPKVSVFPAL 911
FYN++++ +K + + P T HN ND P +P+VS P L
Sbjct: 738 FYNEVYIRVMKEYIPYIKPNFT-----------HNQQANDQPQGSKTPQVSRAPML 782
>gi|195570496|ref|XP_002103243.1| GD19061 [Drosophila simulans]
gi|194199170|gb|EDX12746.1| GD19061 [Drosophila simulans]
Length = 779
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L NRH+DQ++LC + ++ +L+LTF II +YR+QP + +R V + +G
Sbjct: 607 LLRNRHLDQLLLCAIHLHVRLEKLHLTFSMIIQHYRRQPHSRRSAYREVILG------NG 660
Query: 849 RSEQDHVDIITFYNKIFVPAV 869
++ DIITFYN ++V ++
Sbjct: 661 QT----ADIITFYNSVYVQSM 677
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 135/631 (21%), Positives = 242/631 (38%), Gaps = 121/631 (19%)
Query: 19 GDNDATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISAIGNGMPEEAERFWFA 78
GD D R + C+ L ++ + + +R L +S + + E W
Sbjct: 8 GDADTLVRRFSVSCEQ-LELEARIQQGALSTYRR-----LDAVSGLSTSEADAQE--WLC 59
Query: 79 FVLY-LVRRLSEKNGENLQQGSNDNE-------FNLCHILRVMKLNIVDFFKELPQF--L 128
+Y ++R+ ++ +ND+E +L +LR +N+ F + + + L
Sbjct: 60 CAVYSELQRVKMRDIREPNNEANDSEEQNCCWNMSLTSLLRSFNVNMSQFLRRMEHWNWL 119
Query: 129 VKSGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAA 188
++ NI+ +LE +EL+ L + Y+ I+R F+ + D +
Sbjct: 120 TQN----ENIF------QLEVEELRCRLGITLTLLRHYQHIFRCLFVQPGKDADPDATYQ 169
Query: 189 STSGYISDYHRFGWLLFLALR--IHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNI 246
+ Y FGWLLFL +R + F+ +L+ LV + +L ++ R+ I
Sbjct: 170 YQALY-----EFGWLLFLVIRNELPGFAT-TNLINGCQVLVCTMDLLFVNALEVPRSVVI 223
Query: 247 HDSSRFVKKSNKGVDLIASLCSIYDTSEDDLRKIMEKTNTLIADILKKKPCEASEC---K 303
V K D L + Y ++E LI ++ K + K
Sbjct: 224 RREFSGVPKKWDTEDFNPILLNKYS--------VLEALGELIPELPAKGVMQMKNAFFHK 275
Query: 304 SENLENIDTDGL---IYFENLMDDSSLSSSLNILEKDYDNATRNKGELDERVFINEDDSL 360
+ + +D L + ++ + L +L L + Y N + E+DERV ++
Sbjct: 276 ALIMLYMDQCLLGDDTHMREIIKEGMLDINLANLNRKYTNQIADISEMDERVLLS----- 330
Query: 361 LGSGSLSGGAVNITGAKRKFDSLASPVKTITSPLSP-HRSSASH--PNGIAGGATSKMVV 417
+ K DS P + SP HR +H P +
Sbjct: 331 -------------VKGETKEDSPKRPQLAFQTSSSPSHRKLFTHDLPKTL---------- 367
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
P+S +I P K A DK V+ + L
Sbjct: 368 -PLS-----------IIKAFPKKEDA---------DKTVS--------------YLDETL 392
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAE-AQVLHAKNLTSLLTNER 536
E T ++ + +D+ + +R +A L Y+ L+ + E Q H K + L+ +
Sbjct: 393 EEMNRTFTMAVKDFLDDELSRKRFRQARGLCYKYLQKILGPELVQKPHLK-IGQLIKRRK 451
Query: 537 FHRCMLACSAELVLATHKTVT--MLFPAVLERTGITAFDLSKVIESFIRHEES-LPRELR 593
+LAC EL L H + + FP VL + A+D K++E +R + L REL
Sbjct: 452 LTDALLACCLELALHVHHKLVEGLKFPFVLHCFSLDAYDFQKILELVVRCDHGFLGRELT 511
Query: 594 RHLNSLEERLLESMVWEKGSSMYNSLTVARP 624
+HL+ +EE L+S+++ K S ++ L P
Sbjct: 512 KHLDVVEEMCLDSLIFRKSSQLWWELKQRIP 542
>gi|269925026|gb|ACZ52823.1| mating type protein [Volvox carteri f. nagariensis]
gi|269925028|gb|ACZ52824.1| mating type protein [Volvox carteri f. nagariensis]
gi|269925030|gb|ACZ52825.1| mating type protein [Volvox carteri f. nagariensis]
Length = 316
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 122/331 (36%), Gaps = 74/331 (22%)
Query: 208 LRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLC 267
LRI S F D+V+C L + AIL+ H P + D V + L+ SL
Sbjct: 2 LRIKLLSSFPDVVSCVELLPCVFAILVSHAP------QLPDCLSHVSGAEYRSALLKSLS 55
Query: 268 SIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE-----NL-------ENIDTDGL 315
I ++ + L++ +L E E S NL E G+
Sbjct: 56 EICKADYSRVQARIPSVEALLSHVLTSAVPEWREAASHAQLESNLAKSATAAEKCTFPGV 115
Query: 316 I------YFENLMDDSS-LSSSLNILEKDY-DNATRNKGELDERVFINEDDSLLGS---- 363
+ E L+ D + + +L+ LE +Y + TR ELDER F+ D + S
Sbjct: 116 VDLVSSRLLEGLVTDGNRMQRALSALETEYAQHYTRGGSELDEREFLFTDFTKFASPRFS 175
Query: 364 --------------------GSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH 403
GSL G + T + S +P ++ + R +
Sbjct: 176 PRHMQSAVMKLRAGPLPIRQGSLLGPGAHTTASYAISPSSMNPKTSLLA-----RMHSPL 230
Query: 404 PNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR 463
P + G + VTPVS M+T+ WLR + L ++PS + R+L
Sbjct: 231 PK-LNLGVETGPPVTPVSEIMSTSAWLRGITASLAAEPSPSVMRYLA------------- 276
Query: 464 AHIILEAIFPSSGLGERCVTGSLQGANLMDN 494
E P G CVT +L A ++
Sbjct: 277 -----EVAVPPDGEQGACVTVTLSAAEQLNQ 302
>gi|269925032|gb|ACZ52826.1| mating type protein [Volvox carteri f. nagariensis]
Length = 316
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 122/331 (36%), Gaps = 74/331 (22%)
Query: 208 LRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNKGVDLIASLC 267
LRI S F D+V+C L + AIL+ H P + D V + L+ SL
Sbjct: 2 LRIKLLSSFPDVVSCVELLPCVFAILVSHAP------QLPDCLSHVSGAEYRSALLKSLS 55
Query: 268 SIYDTSEDDLRKIMEKTNTLIADILKKKPCEASECKSE-----NL-------ENIDTDGL 315
I ++ + L++ +L E E S NL E G+
Sbjct: 56 EICKADYSRVQARIPSVEALLSHVLTSAVPEWREAASHAQLESNLAKSATAAEKCTFPGV 115
Query: 316 I------YFENLMDDSS-LSSSLNILEKDY-DNATRNKGELDERVFINEDDSLLGS---- 363
+ E L+ D + + +L+ LE +Y + TR ELDER F+ D + S
Sbjct: 116 VDLVSSRMLEGLVTDGNRMQRALSALETEYAQHYTRGGSELDEREFLFTDFTKFASPRFS 175
Query: 364 --------------------GSLSGGAVNITGAKRKFDSLASPVKTITSPLSPHRSSASH 403
GSL G + T + S +P ++ + R +
Sbjct: 176 PRHMQSAVMKLRAGPLPIRQGSLLGPGAHTTASYAISPSSMNPKTSLLA-----RMHSPL 230
Query: 404 PNGIAGGATSKMVVTPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRR 463
P + G + VTPVS M+T+ WLR + L ++PS + R+L
Sbjct: 231 PK-LNLGVETGPPVTPVSEIMSTSAWLRGITASLAAEPSPSVMRYLA------------- 276
Query: 464 AHIILEAIFPSSGLGERCVTGSLQGANLMDN 494
E P G CVT +L A ++
Sbjct: 277 -----EVAVPPDGEQGACVTVTLSAAEQLNQ 302
>gi|167523296|ref|XP_001745985.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775786|gb|EDQ89409.1| predicted protein [Monosiga brevicollis MX1]
Length = 951
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 156/426 (36%), Gaps = 87/426 (20%)
Query: 408 AGGATSKMVVTPVSTAMTTAKWLRTVICPLPSK---PSAELERFLKSCDKDVTTDVMRRA 464
A + + M TP S A+ LR + LP PS EL + CD+ T ++
Sbjct: 425 ATASGTNMPSTPSSPLRQAAQQLREFMEELPQHTDGPSFELAKCFYECDQTRDTATTQQE 484
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRR---LEALKLYYRVLEAMCTAEAQ 521
L ++ V +L+G W + E+ KL++ +L +
Sbjct: 485 CKQLLSVVQDQ------VVRALRGHQYA-YFWETHEKSLITESEKLFWWLLHDIL----- 532
Query: 522 VLHAKNL-TSLLTNERFHRCMLACSAELVLATHK--------TVTMLFPAVLERTGITAF 572
AK+L TSLL F R ++A S E+VL H+ + FP +L +
Sbjct: 533 ---AKSLNTSLLGRAAFLRAVMALSYEVVLQVHRREWFQVPVPSRLRFPWILHVAHVPPE 589
Query: 573 DLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLT---VARPVL--S 627
++ KVIE I H S + ++L LE +L+ +W GSS + V P + S
Sbjct: 590 NVLKVIEPCIVHTLSAYPVITQYLADLEAGVLQQQLWAVGSSFLARMRRDGVYLPTVHES 649
Query: 628 AEINRLGLLADPMPSLDAIATHINFSSGGLSPVHSLHKHETSPGQNGDIRSPKRPCTDYR 687
I+R G P P H SP
Sbjct: 650 GTIDRPGRRHPPQP------------------------HRASPA---------------- 669
Query: 688 SVLVERNNFTSPVKDRLLGLNNLKSKPLPPPLQSAFASPTRPNPGGGGETCAETGINIFF 747
R N +S D L ++ L P + A+P+ + G + T +
Sbjct: 670 -----RRNLSSLFADEGEPLAKRAARELAPVDNN--ATPSASSRSGSQASLPHTLLTQVA 722
Query: 748 CKINKLAAVRINAMVERLQ-----LSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
K+ L R++ ++ RL+ + I + + L + + L H DQ+I+CC
Sbjct: 723 YKLYPLVIDRLSELIHRLKEVPGAVVTSITKMAWNLLLDVFHNHIQLLEGMHTDQLIICC 782
Query: 803 FYGVAK 808
Y K
Sbjct: 783 VYASLK 788
>gi|343962337|dbj|BAK62756.1| retinoblastoma-like protein 2 [Pan troglodytes]
Length = 157
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 790 FFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQS-- 847
+RH+DQ+++C Y +AK+++ + +F+ I+ YR QPQ + QV+RSV + R++
Sbjct: 1 MMDRHLDQLLMCAIYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSG 60
Query: 848 ---GRSEQD 853
GRS Q+
Sbjct: 61 SSDGRSHQN 69
>gi|195452176|ref|XP_002073245.1| GK14024 [Drosophila willistoni]
gi|194169330|gb|EDW84231.1| GK14024 [Drosophila willistoni]
Length = 807
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 466 IILEAIFPSSGLGERCVTGSLQ---------GANLMDNIWAEQRRLEALKLYYRVLEAMC 516
II+EA+ +SG + SLQ N ++ AE R A LYY++L+ +
Sbjct: 377 IIVEALDKNSGNLLNELKTSLQNMGSQFGIMAKNCLNKQEAEARFNLASGLYYKLLKTII 436
Query: 517 TAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH--KTVTMLFPAVLE-RTGITAFD 573
T+E ++ +T LL F +AC +L L + + ++FP VL + +
Sbjct: 437 TSELELKPFMKITQLLEQPTFSSNFMACCLDLALYAYDEDSDQLMFPFVLSCYPDVDPYH 496
Query: 574 LSKVIESFIRHEES-LPRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
K+ E +RH S L R+L +HL+ +EE+ LES+++ S + +
Sbjct: 497 FQKIPELVVRHHNSLLSRQLVKHLHLVEEKCLESLIFRNSSQFWKCFS 544
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 739 AETGINIFFC--KINKLAAVRINAMVERLQLSQQIRESVYCLFQ----QILNQRTSLFFN 792
A T + C K LA R+ + + L I+ES ++Q I + L
Sbjct: 572 ASTTQGPYICLRKFYSLAHQRLTRLCQALY----IKESYIHIWQLVEYSITFEGGKLIQQ 627
Query: 793 RHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQ 852
RH+DQ++LC + ++++ L F +II YR+QP K V+R V + GR+
Sbjct: 628 RHLDQLLLCAIHLHDRLTKERLNFSDIIQQYRRQPFGKSSVYRQVVLS------EGRTG- 680
Query: 853 DHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRV 888
DII FYN+I+V +V +L + A+ T +
Sbjct: 681 ---DIIAFYNQIYVKSVANYARKLLQSRRAVNTQMI 713
>gi|145536055|ref|XP_001453755.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421488|emb|CAK86358.1| unnamed protein product [Paramecium tetraurelia]
Length = 886
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 743 INIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCC 802
+N F ++ A +I + ++L +Q++E ++ + I++++T +DQI+L
Sbjct: 584 MNRLFKRVLHYCAFQIQVICSNIKLQEQLQEYIWITIKYIISEKTDHLRYHSLDQIVLAS 643
Query: 803 FYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFV--DWASARQSGRSEQDHVDIITF 860
Y V K++ L F++II Y + F V + S G DI+++
Sbjct: 644 IYAVTKLTGNQLKFQQIINAYELTNTWYSKQFIKKIVCNTYISNDSMG-------DIVSY 696
Query: 861 YNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPALPDMSPKKVS 920
YN+ F+P +K ++++ +K+N V + NN P + + L D+ P++ +
Sbjct: 697 YNQSFIPQIKSFMLQMSH---EIKSNNVPQSPMNNKNPALNNKILD--SPLRDILPRQQN 751
Query: 921 ATHNV 925
T N+
Sbjct: 752 FTTNL 756
>gi|146163474|ref|XP_001011496.2| hypothetical protein TTHERM_00784380 [Tetrahymena thermophila]
gi|146146033|gb|EAR91251.2| hypothetical protein TTHERM_00784380 [Tetrahymena thermophila
SB210]
Length = 1158
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 26/210 (12%)
Query: 418 TPVSTAMTTAKWLRTVICPLPSKPSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSGL 477
TP+S A+ +KW+ S P ++E + +K+ + ++ A I ++ S
Sbjct: 575 TPLSNALDNSKWINMYS---KSDPIKKIEELMNKINKEYKSQLLEEASQIARDVYYSVK- 630
Query: 478 GERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQV-LHAKN-LTSLLTNE 535
+ V+G+ D I E + + L + VLE + + E Q + +N L SLL N+
Sbjct: 631 KKNEVSGT-------DGI--EYKVQKVLSFFQNVLEKLISDEEQKNFYKENVLISLLKNK 681
Query: 536 RFHRCMLA-CSAELVLATHKTVTML----FPAVLERTGITAFDLSKVIESFIRHEESLPR 590
F +LA C + TH V + V++++ IT+ D +VI +F + + +P
Sbjct: 682 SFIFSVLANC-----IMTHCFVKDIKGVNLEMVIKQSKITSLDYWRVISNFAKFDRHIPE 736
Query: 591 ELRRHLNSLEERLLESMVW-EKGSSMYNSL 619
+++ L ++E+++L ++W EK M N+L
Sbjct: 737 SIKQQLFNIEKQILLYIIWEEKECLMQNAL 766
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 754 AAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQLN 813
+A R+ + + L+L +I+E ++ + + L R++DQII+C Y ++ IS
Sbjct: 791 SATRVKEISKILELDDKIQERIWEALLYVYRSQLQLMNRRYVDQIIICSIYALSLISAEL 850
Query: 814 LTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVDIITFYNKIFVPAVKPLL 873
+EI + C+ + + +++ + + +DII FYN+IF+ +KP
Sbjct: 851 FVGKEIKFKGMLSA-CE----NLLHFNSEKVKKTTNDQGESIDIINFYNQIFLKPMKPYF 905
>gi|195054599|ref|XP_001994212.1| GH23495 [Drosophila grimshawi]
gi|193896082|gb|EDV94948.1| GH23495 [Drosophila grimshawi]
Length = 769
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 789 LFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSG 848
L RH+DQ++LC + + L +F +II+ YR QP + V+R V++
Sbjct: 596 LLLERHLDQLLLCAVHLCMRKLCLRSSFSDIIFQYRYQPHAQSAVYREVYMS-------- 647
Query: 849 RSEQDHVDIITFYNKIFVP 867
Q DII+FYN+ +VP
Sbjct: 648 -PGQPTTDIISFYNRCYVP 665
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTNE-RFHRCMLACSAELVLATHKTVTMLFPAVLE 565
LYY +L + AE Q + L + RF+ ++AC +L+L + T+ +L+
Sbjct: 421 LYYTLLGKILAAELQRRPTLKVGQFLMQKNRFNATLIACCLQLMLHILGS-TLQLQWLLQ 479
Query: 566 RTGITAFDLSKVIESFIRH-EESLPRELRRHLNSLEERLLESMVWEKGSSMY 616
I A++ K+IE + H L R L +HL LE R L+S++W++ S ++
Sbjct: 480 LFAINAYEFHKIIELVVTHGRHLLTRNLAKHLGDLEVRCLDSLIWQRNSPLW 531
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 127/309 (41%), Gaps = 47/309 (15%)
Query: 85 RRLSEKNGENLQQGSNDNEFN--LCHILRVMKLNIVDFFKELPQFLVKSGPILSNIYGAD 142
R+ +E + + N N +N L +LR M +NI+ F K + + IY A
Sbjct: 65 RQEAEAGDDPASKKVNGNSWNISLTKLLRRMGINIMRFLKRMEHW----------IYLAQ 114
Query: 143 WENRLEAKELQANFVHLSI---LSKSYKRIYREFFLPSDANGDKQSAAASTSGYISDYHR 199
+ + KE+ HL I L + YK ++R+ ++ A + S S Y Y
Sbjct: 115 -SSAISQKEIVDIKRHLGINRLLLQHYKHLFRKLYVLPPA-----TETESRSHYQMVY-E 167
Query: 200 FGWLLFLALRIHAFSRFKDL-VTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
FGWLLFLA R DL V ++ LV+ +L+ + + + N SS + K
Sbjct: 168 FGWLLFLAAR-------NDLPVVVSSCLVTGCQVLVCALELVYVNALEVPSSDIINAEFK 220
Query: 259 GVDLIASLCSIYDTSEDDLRKI--MEKTNTLIADILKKKPCEASECKSENLENIDTDGLI 316
G+ S C +D D LR +E LI ++ K + + + ++ D +
Sbjct: 221 GLPTNWS-CGDFDI--DLLRNYSALEAICELIPELSSKSVSMMRKIFHKAVMSMFMDQRL 277
Query: 317 Y-----FENLMDDSSLSSSLNILEKDYDNATRNKGELDERV----FINEDDSLLGSGSLS 367
+L+ D L +L L Y + E+DER+ FI E S L+
Sbjct: 278 LGNDRSLRHLIKDGILEVNLASLNSSYAQHVSDITEIDERILLTHFIAETPS---KAQLT 334
Query: 368 GGAVNITGA 376
G + GA
Sbjct: 335 GKQLPRNGA 343
>gi|356530617|ref|XP_003533877.1| PREDICTED: retinoblastoma-related protein-like [Glycine max]
Length = 68
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 6 PSVTASNNSESNAGDN--DATEARLTDLCKNGLSVDENTYKEIIKLFRETKHLLLANISA 63
P T SN E N D + + CKNGL+++E + KE LF ETKH+LL+N S+
Sbjct: 3 PPPTESNAMEDGKPMNGSDQVGSCFVEFCKNGLALEEKSCKEAKNLFGETKHILLSNFSS 62
Query: 64 IGNGM 68
+GNGM
Sbjct: 63 MGNGM 67
>gi|195166813|ref|XP_002024229.1| GL22656 [Drosophila persimilis]
gi|194107584|gb|EDW29627.1| GL22656 [Drosophila persimilis]
Length = 387
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 504 ALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATH--KTVTMLFP 561
A +LYY+ L+ + +E + + LL ++AC EL L + + FP
Sbjct: 220 ACRLYYQFLQRIIGSELLLKPHLKMVQLLKQRTLSVTLVACCLELALRIREDRVEELKFP 279
Query: 562 AVLERTGITAFDLSKVIESFIRHEESL-PRELRRHLNSLEERLLESMVWEKGSSMYNSLT 620
+L+ + A++ K++E +RH L R+L +HL ++E+ L S+++ SS + L
Sbjct: 280 FILKCYSLDAYEFQKILELVVRHRTGLIGRDLIKHLQAVEDECLGSLMFRGDSSFWKILG 339
Query: 621 VARPVLSAE 629
A+ V S +
Sbjct: 340 KAQRVPSCK 348
>gi|118369190|ref|XP_001017800.1| hypothetical protein TTHERM_00439030 [Tetrahymena thermophila]
gi|89299567|gb|EAR97555.1| hypothetical protein TTHERM_00439030 [Tetrahymena thermophila
SB210]
Length = 1042
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 741 TGINIFFCKINKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIIL 800
+ I FF ++ A IN + L+L+ +I E+V+ + + IL ++ + RHIDQ+++
Sbjct: 576 SAIEKFFRRVLHQCAYTINQVCSALKLNDKISEAVWRIMKHILANQSDILLGRHIDQLVI 635
Query: 801 CCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHVD-IIT 859
C Y + K+ + F++I+ Y + + R + A + +D I++
Sbjct: 636 CSIYIMCKLFKSETIFKQILNKYEELNSHNKAMMRELIYAMPIAP-------NKLDTIVS 688
Query: 860 FYNKIFVPAVKPLLVEL 876
+YN +++ VK V++
Sbjct: 689 YYNNVYLGFVKEAAVQI 705
>gi|86370952|gb|ABC94614.1| chromodomain-helicase-DNA-binding protein 6 [Ictalurus punctatus]
Length = 199
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 56/175 (32%)
Query: 824 RKQPQCKPQVFRSVF---------------VDWASARQSGRSEQ------------DHVD 856
R QPQ ++RSV VD + + +GR++Q D D
Sbjct: 1 RSQPQASSHIYRSVLLRKGVHEQQTDDTMEVDPPTEQTNGRTDQGAKVKADSESDEDRGD 60
Query: 857 IITFYNKIFVPAVKPLLVELG-PAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPAL--PD 913
+I FYN ++V +K + PA S VN +P +S FP+L
Sbjct: 61 LIQFYNSVYVLKMKSFALRYTHPAAD-------SRVN---------APPLSPFPSLRAQP 104
Query: 914 MSPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+SP+++S H+VY+SP K + + SS Y G SPSK+L+DIN
Sbjct: 105 LSPRRISQRHSVYLSP---HKNGSCLKPSSAYTYKFSG-------SPSKELSDIN 149
>gi|219119462|ref|XP_002180491.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407964|gb|EEC47899.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1198
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 507 LYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFP----- 561
LYY LEA+ E++ L K L+ ++ FHR +LAC + L P
Sbjct: 773 LYYHALEAILYNESKRLKTKAHPRLVLDDVFHRSILACCINATIHAVGATQKLQPSPSLQ 832
Query: 562 -----AVLERTGITAFDLSKVIESFIR---------HEES-----LPRELRRHLNSLEER 602
A+++ T I + K+ ESF+R H S LP +R+++ + E +
Sbjct: 833 GLQVFAIMQMTDINPAEYVKISESFVRALTTDTARGHLGSPLIFALPALVRKYMQATELK 892
Query: 603 LLESMVW 609
+L+S++W
Sbjct: 893 ILDSLIW 899
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 749 KINKLAAVRINAMVERLQLSQ--QIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGV 806
KI K++ RI + + L + I ++ F+ L L ++RH+D ILC YG+
Sbjct: 974 KILKISFHRIQIICKELAIPSILPIVTQIWVTFRYFLRNNVHLLYDRHLDHWILCAVYGI 1033
Query: 807 AKISQLN--LTFREIIYNYRK-------QPQCKPQVFRSVFVDWASARQSGRSEQDHVDI 857
K + +TF II Y C+ ++ R + V+ ++ + ++
Sbjct: 1034 TKTVRYKPEITFARIIDAYVTVRGRELGDVTCQ-RIVRHIKVN------PDKAATEVGNV 1086
Query: 858 ITFYNKIFVPAVKPLLVE 875
I YN+IFVP++K L++
Sbjct: 1087 ILLYNRIFVPSMKAHLLK 1104
>gi|444729193|gb|ELW69620.1| Retinoblastoma-like protein 1 [Tupaia chinensis]
Length = 697
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 14/79 (17%)
Query: 577 VIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPVLSAEINRLGLL 636
VIE IR EE L R++ +HLNS+EE++LES+ W S ++ +L +
Sbjct: 248 VIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHSSVLWETLQAS-------------- 293
Query: 637 ADPMPSLDAIATHINFSSG 655
A+ +P+ + + NF +G
Sbjct: 294 ANKVPTCEEVIFPNNFETG 312
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 27/128 (21%)
Query: 851 EQDHVDIITFYNKIFVPAVKPLLVELGPAGTAMKTNRVSEVNHNNDGPCPGSPKVSVFPA 910
+++ D+I FYN I+V VK A+K + +S +H D P P SP FP
Sbjct: 553 KEERGDLIKFYNTIYVGRVKSF---------ALKYD-LSNQDHVMDAP-PLSP----FPH 597
Query: 911 LPDM--SPKKVSATHNVYVSPLRTSKMDALISHSSKSYYACVGESTHAYQSPSKDLTDIN 968
+ SP+++S H+VYVSP K + ++ S Y G SPSK L DIN
Sbjct: 598 IKQQPGSPRRISQQHSVYVSP---HKSGSGLTPRSALLYKFNG-------SPSKSLKDIN 647
Query: 969 HRLNSNRR 976
+ + +
Sbjct: 648 NMIRQGEQ 655
>gi|222091768|gb|ACM43280.1| retinoblastoma 1 [Peromyscus polionotus subgriseus]
Length = 48
Score = 49.7 bits (117), Expect = 0.009, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLES 606
FP +L + AFD KVIESFI+ E +L RE+ +HL E R++ES
Sbjct: 2 FPWILNVLNLKAFDFYKVIESFIKVETNLTREMIKHLERCEHRIMES 48
>gi|226374707|gb|ACO52488.1| retinoblastoma, partial [Anguilla anguilla]
Length = 103
Score = 47.4 bits (111), Expect = 0.039, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 783 LNQRTSLFFNRHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQPQCKPQVFRSVFVDWA 842
L L +RH+DQ+++ Y + K+ ++L F+ I+ Y+ P + F+ V +
Sbjct: 2 LQHEYELMRDRHLDQLMMSAMYAICKVKNIDLRFKTIVTAYKNLPNTNQETFKRVLI--- 58
Query: 843 SARQSGRSEQDHVDIITFYNKIFVPAVK 870
+ + II FYN +F+ +K
Sbjct: 59 -------RDGQYDSIIVFYNLVFMQRLK 79
>gi|432852990|ref|XP_004067486.1| PREDICTED: retinoblastoma-like protein 2-like, partial [Oryzias
latipes]
Length = 365
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 20/129 (15%)
Query: 497 AEQRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTV 556
AE+ +A Y+R+L+ M E +V+ + + LL+N FHRC++AC E+ +A++ +
Sbjct: 64 AEECCRQAGIYYFRILKNM--MERRVI--SDNSGLLSNG-FHRCLVACCLEVQIASNH-L 117
Query: 557 TMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRH------LNSLEERLLESMVWE 610
FP +L +T + L KVIE L R L +H L+ +++++LES+ W
Sbjct: 118 PCDFPQLLRILQLTPYHLIKVIE--------LVRTLDQHYHVCKSLSQVKQQILESLAWT 169
Query: 611 KGSSMYNSL 619
S ++ +
Sbjct: 170 GDSPLWEEI 178
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%)
Query: 750 INKLAAVRINAMVERLQLSQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKI 809
+ + A R+ + +L+LS +R S++ F+ L Q L N H+DQ++ Y A++
Sbjct: 266 VYTMTAARLEDLGSKLKLSGDLRRSIWTCFENSLVQHPRLMVNHHLDQLLFSSIYITAQV 325
Query: 810 SQLNLTFREIIYNY 823
++ LT +I+ Y
Sbjct: 326 TRTTLTVSDIMDAY 339
>gi|326431913|gb|EGD77483.1| hypothetical protein PTSG_08579 [Salpingoeca sp. ATCC 50818]
Length = 816
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 441 PSAELERFLKSCDKDVTTDVMRRAHIILEAIFPSSG--LGERCVTGSLQGANLMDNIWAE 498
P+A L FL+S + DV A LE +F + + +L+ + L N
Sbjct: 318 PAAHLS-FLRSLS---SIDVPESAAAPLEDVFARADQKVTAWVAANALRNSQLFSNFTRI 373
Query: 499 QRRLEALKLYYRVLEAMCTAEAQVLHAKNLTSLLTNERFHRCMLACSAELVLATHKTVTM 558
+ L A KL V+E A V HA +SLL + ++A + +LVL +K T+
Sbjct: 374 GKAL-AYKLLSGVIEREFAARGLVRHA---SSLLQRADVLKTVVALALDLVLFAYKDKTI 429
Query: 559 LFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS 618
FP+++ + FD ++ E +R LP L + + E L +VW S N
Sbjct: 430 SFPSLVSMLDVDPFDYQQMTEIVVRSNPFLPPVLLARIAACERVCLLDLVW-TASHKLND 488
Query: 619 LTVARPVLSAE 629
++P LS++
Sbjct: 489 WFESKPALSSQ 499
>gi|170026487|gb|ACB05916.1| mating type protein [Chlamydomonas reinhardtii]
Length = 141
Score = 45.4 bits (106), Expect = 0.18, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
R GW FL LR+ S F D+V+C L I AIL H P + D + + N+
Sbjct: 19 RLGWSAFLVLRVKLLSAFPDVVSCVELLPCIFAILASHAP------RLPDCLTHITRENR 72
Query: 259 GVDLIASLCSIYDTSEDDLRKIMEKTNTLIA 289
G L+ S+ DT + D ++ + ++ A
Sbjct: 73 GKFLLKSMA---DTCKADYGRVQARMPSVEA 100
>gi|223997270|ref|XP_002288308.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975416|gb|EED93744.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1151
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 757 RINAMVERLQL--SQQIRESVYCLFQQILNQRTSLFFNRHIDQIILCCFYGVAKISQL-- 812
R+ A+ L L S + + +F +L R LFF+RH DQI+LC Y +L
Sbjct: 1028 RVQALCNVLSLPNSIAVHDKTMMVFTTMLCYRIDLFFDRHPDQIMLCSMYAACAKMKLAP 1087
Query: 813 NLTFREI--IYNYRKQPQCKPQVFRSVFVDWASARQSGRSEQDHV-DIITFYN 862
+ F +I Y + + P V + + S+ D + DII+FYN
Sbjct: 1088 EIDFTKINDAYAETNKHELSPHVVHKILFQIKFS-----SDNDGIGDIISFYN 1135
>gi|170026477|gb|ACB05911.1| mating type protein [Chlamydomonas reinhardtii]
Length = 141
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
R GW FL LR+ S F D+V+C L I AIL H P + D + + N+
Sbjct: 19 RLGWSAFLVLRVKLLSAFPDVVSCVELLPCIFAILASHAP------RLPDCLTHITRENR 72
Query: 259 GVDLIASLCSIYDTSEDDLRKIMEK 283
G L+ S+ DT + D ++ +
Sbjct: 73 GKFLLKSMA---DTCKADYGRVQAR 94
>gi|170026479|gb|ACB05912.1| mating type protein [Chlamydomonas reinhardtii]
Length = 138
Score = 43.9 bits (102), Expect = 0.52, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
R GW FL LR+ S F D+V+C L I AIL H P + D + + ++
Sbjct: 19 RLGWSAFLVLRVKLLSAFPDVVSCVELLPCIFAILASHAP------RLPDCLTHITREDR 72
Query: 259 GVDLIASLCSIYDTSEDDLRKIMEKTNTLIADIL 292
G L+ S+ + ++ M L+ +
Sbjct: 73 GKFLLKSMADVCKADYGRVQARMPSVEALLTQVF 106
>gi|302788981|ref|XP_002976259.1| hypothetical protein SELMODRAFT_416338 [Selaginella moellendorffii]
gi|300155889|gb|EFJ22519.1| hypothetical protein SELMODRAFT_416338 [Selaginella moellendorffii]
Length = 256
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 49/160 (30%)
Query: 71 EAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVK 130
EAER W A +LY V++L K + F +L V+ L+ LPQFL
Sbjct: 112 EAERIWMACMLYTVKKLERK---------GVHAFTPSQVLWVINLSDSS---TLPQFLRN 159
Query: 131 SGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAST 190
P L I+ E +E+ L +LS YK+ ++++
Sbjct: 160 WIPTLEGIFSG------EDQEI------LMVLSSHYKK-FQDY----------------- 189
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSIL 230
S R WLLFLA + R +L+TCTN L++++
Sbjct: 190 ----SSNERTRWLLFLAALL---GRHPNLLTCTNTLLAVI 222
>gi|170026475|gb|ACB05910.1| mating type protein [Chlamydomonas reinhardtii]
gi|170026481|gb|ACB05913.1| mating type protein [Chlamydomonas reinhardtii]
gi|170026483|gb|ACB05914.1| mating type protein [Chlamydomonas reinhardtii]
gi|170026485|gb|ACB05915.1| mating type protein [Chlamydomonas reinhardtii]
Length = 141
Score = 43.5 bits (101), Expect = 0.57, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 199 RFGWLLFLALRIHAFSRFKDLVTCTNGLVSILAILIIHVPVRFRNFNIHDSSRFVKKSNK 258
R GW FL LR+ S F D+V+C L I AIL H P + D + + ++
Sbjct: 19 RLGWSAFLVLRVKLLSAFPDVVSCVELLPCIFAILASHAP------RLPDCLTHITREDR 72
Query: 259 GVDLIASLCSIYDTSEDDLRKIMEKTNTLIADIL 292
G L+ S+ + ++ M L+ +
Sbjct: 73 GKFLLKSMADVCKADYGRVQARMPSVEALLTQVF 106
>gi|1088331|gb|AAA82560.1| retinoblastoma suspectibility protein, partial [Homo sapiens]
Length = 59
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW 609
FP +L + AFD KVIESFI+ E+ +HL E R++ES+ W
Sbjct: 14 FPWILNVLNLKAFDFYKVIESFIK------AEMIKHLERCEHRIMESLAW 57
>gi|794016|gb|AAB59580.1| exon 17 tumor GOS561 substitution mutation causes premature stop,
partial [Homo sapiens]
Length = 55
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 560 FPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLE 600
FP +L + AFD KVIESFI+ E +L RE+ +HL E
Sbjct: 14 FPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCE 54
>gi|302791689|ref|XP_002977611.1| hypothetical protein SELMODRAFT_417490 [Selaginella moellendorffii]
gi|300154981|gb|EFJ21615.1| hypothetical protein SELMODRAFT_417490 [Selaginella moellendorffii]
Length = 180
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 49/161 (30%)
Query: 71 EAERFWFAFVLYLVRRLSEKNGENLQQGSNDNEFNLCHILRVMKLNIVDFFKELPQFLVK 130
EAER W A +LY V++L K + F +L V+ L+ LPQFL
Sbjct: 36 EAERIWMACMLYTVKKLERKGV---------HAFTPSQVLWVINLSDSS---TLPQFLRN 83
Query: 131 SGPILSNIYGADWENRLEAKELQANFVHLSILSKSYKRIYREFFLPSDANGDKQSAAAST 190
P L I+ E +E+ L +LS YK+ ++++
Sbjct: 84 WIPTLERIFSG------EDQEI------LMVLSSHYKK-FQDY----------------- 113
Query: 191 SGYISDYHRFGWLLFLALRIHAFSRFKDLVTCTNGLVSILA 231
S R WLLFLA R +L+TCTN L++++
Sbjct: 114 ----SSNERTRWLLFLA---ALLGRHPNLLTCTNTLLAVIV 147
>gi|348515031|ref|XP_003445043.1| PREDICTED: hypothetical protein LOC100706208 [Oreochromis
niloticus]
Length = 810
Score = 41.6 bits (96), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 486 LQGANLMDNIWAEQRRLEALKLYYRVLEAMCT---AEAQVLHAKNLTSLLTNERFHRCML 542
L+ +L + ++R LE L + LE C+ +E Q H +N+ +TN R +
Sbjct: 239 LRSQDLEHQLHTKERELEQLFQKQKRLEHQCSELSSEKQESHVENVKLKMTNNELSRALE 298
Query: 543 ACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP------RELRRHL 596
+ S ELVLA + + ML ++ +V E R ++SL RE+ +HL
Sbjct: 299 STSQELVLA-QEQLAMLQEQAARLQQEKEMEMYRVTEGLQREKQSLMKQLDLLREMNKHL 357
Query: 597 N 597
Sbjct: 358 K 358
>gi|348505328|ref|XP_003440213.1| PREDICTED: carnitine O-acetyltransferase-like [Oreochromis
niloticus]
Length = 679
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 6/139 (4%)
Query: 409 GGATSKMVVTPVSTAMTTAKWL---RTVICPLPSKPSAE-LERFLKSCDKDVTTDVMRRA 464
G + +V PVS ++L + + C LP P + ER+L + + V D ++R
Sbjct: 61 GFVKTSFLVKPVSATRVAGRYLTHQKGLPC-LPVPPLQQTCERYLAALEPIVEADEVKRT 119
Query: 465 HIILEAIFPSSGLGERCVTGSLQGANLMDNIWAEQRRLEALKLYYRVLEAMCTAEAQVLH 524
+LE + GLGER G + A+ +N W Q ++ L YR+ + ++ VL
Sbjct: 120 KGLLEEFQRAGGLGERLQRGLEKRASKTEN-WLSQWWVQVAYLDYRLPVVVHSSPGLVLP 178
Query: 525 AKNLTSLLTNERFHRCMLA 543
N + RF ++A
Sbjct: 179 RMNFSDKKGQIRFAAKLIA 197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,696,172,774
Number of Sequences: 23463169
Number of extensions: 661911426
Number of successful extensions: 1780065
Number of sequences better than 100.0: 488
Number of HSP's better than 100.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1776985
Number of HSP's gapped (non-prelim): 1186
length of query: 1024
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 871
effective length of database: 8,769,330,510
effective search space: 7638086874210
effective search space used: 7638086874210
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)