Query 001702
Match_columns 1024
No_of_seqs 150 out of 275
Neff 3.5
Searched_HMMs 13730
Date Tue Mar 26 16:40:01 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001702.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_999-1003//hhsearch_scop/001702hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyjb5 b.40.4.3 (B:2980-3117) 14.6 12 0.00085 13.2 -0.8 38 424-461 65-106 (138)
2 d1dx5i1 g.3.11.1 (I:345-387) T 5.6 60 0.0044 8.3 0.5 19 437-455 2-20 (43)
3 d1pn0a3 d.16.1.2 (A:241-341) P 4.7 76 0.0056 7.5 2.8 36 602-637 18-53 (101)
4 d1kt1a3 d.26.1.1 (A:139-253) F 3.7 1E+02 0.0074 6.7 2.0 49 868-927 62-112 (115)
5 d1x4la1 g.39.1.3 (A:8-36) Four 3.7 1E+02 0.0075 6.6 0.3 13 945-957 14-26 (29)
6 d1ev0a_ d.71.1.1 (A:) Cell div 3.5 1.1E+02 0.0079 6.5 0.6 33 6-40 13-48 (58)
7 d1r0ka3 d.81.1.3 (A:127-264) 1 3.1 1.2E+02 0.0091 6.1 0.9 29 596-624 29-58 (138)
8 d1x68a1 g.39.1.3 (A:8-36) Four 2.8 1.4E+02 0.01 5.7 0.5 12 946-957 15-26 (29)
9 d1eaka1 a.20.1.2 (A:32-107) Ge 2.8 1.4E+02 0.01 5.6 0.3 33 846-878 15-47 (76)
10 d1jvra_ a.61.1.2 (A:) HTLV-II 2.7 1.5E+02 0.011 5.5 0.9 19 656-674 76-94 (137)
No 1
>d1iyjb5 b.40.4.3 (B:2980-3117) OB-fold domains of BRCA2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.62 E-value=12 Score=13.22 Aligned_cols=38 Identities=39% Similarity=0.510 Sum_probs=19.5
Q ss_pred CCEEEEEECCCCC---CCCCCCCCC-CCEEECCCEEEEECCC
Q ss_conf 4569986233126---999998542-2222012219983022
Q 001702 424 VPLICLHTLQVKP---SPAPPSFAS-RTVISCQPLMIHLQEE 461 (1024)
Q Consensus 424 ~pl~cl~~~q~~p---sp~pp~~as-~tvi~cqpl~i~lqe~ 461 (1024)
-.+||.--||..| |++|-.||. .|++++.|-..||||+
T Consensus 65 ~~lia~SNLQwR~~s~s~vPtl~Age~s~FS~~PK~~Hlqe~ 106 (138)
T d1iyjb5 65 RVLIAASNLQWRPESTSRVPTLFAGNFSVFSASPKEAHFQER 106 (138)
T ss_dssp TCEEEEEEEEECCCTTCSSCEEEEEEEEEEESSCSSHHHHHH
T ss_pred CEEEEEECCEECCCCCCCCCEEEEECCCEECCCCCHHHHHHH
T ss_conf 549998411770464788863885033222279408799999
No 2
>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.65 E-value=60 Score=8.26 Aligned_cols=19 Identities=37% Similarity=0.747 Sum_probs=15.0
Q ss_pred CCCCCCCCCCCEEECCCEE
Q ss_conf 9999985422222012219
Q 001702 437 SPAPPSFASRTVISCQPLM 455 (1024)
Q Consensus 437 sp~pp~~as~tvi~cqpl~ 455 (1024)
-|+-|+|-++---||||+-
T Consensus 2 e~vDPCf~~~CE~qCqP~~ 20 (43)
T d1dx5i1 2 EPVDPCFRANCEYQCQPLD 20 (43)
T ss_dssp CCCCGGGGCCCSSEEEECS
T ss_pred CCCCCCCCCCCCEEEEECC
T ss_conf 5346456997403415179
No 3
>d1pn0a3 d.16.1.2 (A:241-341) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}
Probab=4.68 E-value=76 Score=7.55 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=26.7
Q ss_pred ECCCCEEEEEEEECCCCCCEECCCCCCEEEEEEEEE
Q ss_conf 426633899997329984201289996899935420
Q 001702 602 ELKDACIEVAMVSADGKPLTVVPPPGGVVRIGVACQ 637 (1024)
Q Consensus 602 el~d~~~e~am~tadg~pl~~vpppggivr~gv~~~ 637 (1024)
++-|++.-.|.-|++.+-+|.+|-.+|.||+.|.-+
T Consensus 18 dFPDiR~~~~I~S~~~G~vl~IPRE~~l~R~Yv~l~ 53 (101)
T d1pn0a3 18 NFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQ 53 (101)
T ss_dssp CCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECC
T ss_conf 899985378999379874999987899289999857
No 4
>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=3.70 E-value=1e+02 Score=6.67 Aligned_cols=49 Identities=20% Similarity=0.287 Sum_probs=32.4
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CEEEEEEEECH
Q ss_conf 6523320013878222334459871013589875568999854589997--11358984001
Q 001702 868 EGLSKGIEHLSEGPLSKLFKASPLSVEDVGEGRNSLDGKDGLVHLGLPD--DVDICVELKDW 927 (1024)
Q Consensus 868 ~gl~k~l~~ls~gpl~~lfk~s~~~~~~~~~~~~~~~~~~~~~~l~~pd--~~dv~i~l~dw 927 (1024)
+|+..+|.....|--+.++=++.+ .-|+.+.+.+++|- .|-..|||.++
T Consensus 62 ~G~~~~l~~M~~Ge~~~v~ip~~~-----------ayG~~g~~~~~Ipp~a~l~f~ieLl~~ 112 (115)
T d1kt1a3 62 IGIDKALEKMQREEQCILHLGPRY-----------GFGEAGKPKFGIEPNAELIYEVTLKSF 112 (115)
T ss_dssp HHHHHHHTTCCTTCEEEEEECGGG-----------SSCTTCBTTTTBCTTCCEEEEEEEEEE
T ss_pred CHHHHHHCCCHHHCEEEEEECHHH-----------CCCCCCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 226755301252360599959999-----------767778888885949859999999999
No 5
>d1x4la1 g.39.1.3 (A:8-36) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.66 E-value=1e+02 Score=6.63 Aligned_cols=13 Identities=38% Similarity=0.856 Sum_probs=7.6
Q ss_pred CCCCCCCCEEEEE
Q ss_conf 7655643202452
Q 001702 945 SQEVGREERSWHT 957 (1024)
Q Consensus 945 ~~~~~ree~~wh~ 957 (1024)
..-|+=|||-||.
T Consensus 14 ~kyisFE~R~WH~ 26 (29)
T d1x4la1 14 TKYISFEERQWHN 26 (29)
T ss_dssp CSCEECSSCEECT
T ss_pred CEEEEEECCCCCC
T ss_conf 2588750100244
No 6
>d1ev0a_ d.71.1.1 (A:) Cell division protein MinE topological specificity domain {Escherichia coli [TaxId: 562]}
Probab=3.53 E-value=1.1e+02 Score=6.49 Aligned_cols=33 Identities=12% Similarity=0.258 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCCE---ECCEEEEECCCCC
Q ss_conf 9999888877712999468402---1370896052036
Q 001702 6 ARALEYTFKYWLKSFSRDQFKL---QGRTAQLSNLDIN 40 (1024)
Q Consensus 6 a~lLnk~Lg~YVKNLdpDQLkL---sGGdVeL~NLELK 40 (1024)
..=|...+++|++ .++|++++ .. ++.++=||||
T Consensus 13 q~eil~VI~KyV~-Id~d~v~V~le~~-~~~~svLEln 48 (58)
T d1ev0a_ 13 RKDILEVICKYVQ-IDPEMVTVQLEQK-DGDISILELN 48 (58)
T ss_dssp HHHHHHHHHHHSC-CCGGGEEEEEEEE-TTTEEEEEEE
T ss_pred HHHHHHHHHHHEE-ECHHHEEEEEECC-CCCEEEEEEE
T ss_conf 9999999987475-0679969998627-9978799998
No 7
>d1r0ka3 d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=3.14 E-value=1.2e+02 Score=6.07 Aligned_cols=29 Identities=14% Similarity=0.521 Sum_probs=15.4
Q ss_pred CCEEEEECCCC-EEEEEEEECCCCCCEECC
Q ss_conf 72257642663-389999732998420128
Q 001702 596 GLWKCVELKDA-CIEVAMVSADGKPLTVVP 624 (1024)
Q Consensus 596 ~lw~cvel~d~-~~e~am~tadg~pl~~vp 624 (1024)
.+|+|.+-.+. .++--.+||-|+|+.+.+
T Consensus 29 AI~Q~L~~~~~~~I~kI~LTASGGPF~~~~ 58 (138)
T d1r0ka3 29 AIFQCFPHHNRDYVRRIIITASGGPFRTTS 58 (138)
T ss_dssp HHHHHCCTTCGGGEEEEEEEECCCTTTTCC
T ss_pred HHHHHHHHCCCCCCCEEEEECCCHHHHCCH
T ss_conf 899988523766302799933653343144
No 8
>d1x68a1 g.39.1.3 (A:8-36) Four and a half LIM domains protein 5, FHL-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.84 E-value=1.4e+02 Score=5.69 Aligned_cols=12 Identities=17% Similarity=0.601 Sum_probs=6.9
Q ss_pred CCCCCCCEEEEE
Q ss_conf 655643202452
Q 001702 946 QEVGREERSWHT 957 (1024)
Q Consensus 946 ~~~~ree~~wh~ 957 (1024)
.-|+=|||-||.
T Consensus 15 k~isFedR~WH~ 26 (29)
T d1x68a1 15 KFICFQDSQWHS 26 (29)
T ss_dssp CEEEETTEEEEG
T ss_pred EEEEEEHHHCCC
T ss_conf 588750200123
No 9
>d1eaka1 a.20.1.2 (A:32-107) Gelatinase A (MMP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.80 E-value=1.4e+02 Score=5.65 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCC
Q ss_conf 524678888671424899999965233200138
Q 001702 846 GMNYAEALLHRFGILGPDGGPGEGLSKGIEHLS 878 (1024)
Q Consensus 846 gm~y~e~llhrfgilgpdggpg~gl~k~l~~ls 878 (1024)
.+..|+.-|.|||-+-.+++.-.-++..|+.++
T Consensus 15 d~e~A~~YL~~fgyl~~~~~~~~~l~~ai~~~Q 47 (76)
T d1eaka1 15 DKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQ 47 (76)
T ss_dssp HHHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 399999999995799867775079999999999
No 10
>d1jvra_ a.61.1.2 (A:) HTLV-II matrix protein {Human T-cell leukemia virus type 2 [TaxId: 11909]}
Probab=2.72 E-value=1.5e+02 Score=5.55 Aligned_cols=19 Identities=42% Similarity=0.433 Sum_probs=0.0
Q ss_pred HHHCHHHHHHHHHCCCCCC
Q ss_conf 4100135565451576444
Q 001702 656 TYFGRVSEKIVRVGKNKSA 674 (1024)
Q Consensus 656 ~y~g~v~e~i~~~~~~~~~ 674 (1024)
.|+|||.|-+++.-+...+
T Consensus 76 gypGRv~ei~~iLi~~q~~ 94 (137)
T d1jvra_ 76 GYPGRVVEIINILVKNQVS 94 (137)
T ss_dssp SCSTTHHHHHHHHHTTTCC
T ss_pred CCCCCHHHHHHHHHHCCCC
T ss_conf 9886089999999870379
Done!