Query 001705
Match_columns 1024
No_of_seqs 665 out of 4383
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 07:21:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001705.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001705hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02468 sucrsPsyn_pln sucros 100.0 3E-196 7E-201 1773.5 89.5 1003 1-1022 1-1050(1050)
2 PRK14501 putative bifunctional 100.0 2.7E-58 5.8E-63 571.3 37.5 603 251-1021 70-723 (726)
3 TIGR02470 sucr_synth sucrose s 100.0 4.3E-56 9.4E-61 535.5 44.7 459 166-666 252-745 (784)
4 PLN00142 sucrose synthase 100.0 1.2E-54 2.5E-59 522.7 39.3 462 167-666 277-768 (815)
5 PLN03063 alpha,alpha-trehalose 100.0 3.7E-54 8E-59 532.2 39.5 567 264-967 95-722 (797)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 2.5E-52 5.4E-57 492.4 43.5 437 170-666 1-438 (439)
7 PLN03064 alpha,alpha-trehalose 100.0 5.3E-53 1.2E-57 516.6 36.4 564 264-965 179-810 (934)
8 PLN02205 alpha,alpha-trehalose 100.0 6.1E-52 1.3E-56 511.5 39.9 593 251-966 132-801 (854)
9 PLN02939 transferase, transfer 100.0 2.3E-40 5E-45 399.7 42.1 457 159-672 472-970 (977)
10 TIGR03449 mycothiol_MshA UDP-N 100.0 1.6E-39 3.5E-44 379.8 40.1 402 172-670 1-403 (405)
11 PRK00654 glgA glycogen synthas 100.0 5.3E-40 1.2E-44 390.1 36.0 439 170-671 1-465 (466)
12 PLN02316 synthase/transferase 100.0 3.4E-38 7.4E-43 388.2 43.8 422 166-670 584-1035(1036)
13 PRK10307 putative glycosyl tra 100.0 6.3E-38 1.4E-42 367.4 42.1 398 170-671 1-410 (412)
14 TIGR02095 glgA glycogen/starch 100.0 1.9E-38 4.1E-43 378.2 36.9 440 170-669 1-473 (473)
15 cd03800 GT1_Sucrose_synthase T 100.0 4.2E-38 9E-43 365.5 38.4 395 171-663 1-397 (398)
16 PRK14099 glycogen synthase; Pr 100.0 3.8E-37 8.3E-42 365.2 41.2 445 168-672 2-482 (485)
17 PRK14098 glycogen synthase; Pr 100.0 2.5E-37 5.5E-42 367.1 37.3 433 170-670 6-487 (489)
18 PLN02871 UDP-sulfoquinovose:DA 100.0 5.7E-37 1.2E-41 364.6 40.4 376 167-672 56-438 (465)
19 cd03796 GT1_PIG-A_like This fa 100.0 6.8E-37 1.5E-41 357.0 38.3 367 171-672 1-371 (398)
20 KOG0853 Glycosyltransferase [C 100.0 8.8E-40 1.9E-44 371.2 9.8 474 124-705 2-493 (495)
21 TIGR02149 glgA_Coryne glycogen 100.0 2.3E-36 5E-41 350.6 38.6 377 170-669 1-387 (388)
22 TIGR02400 trehalose_OtsA alpha 100.0 3.2E-37 6.9E-42 361.3 23.9 355 251-667 64-455 (456)
23 PRK15427 colanic acid biosynth 100.0 2.5E-35 5.4E-40 343.8 39.0 278 303-668 117-405 (406)
24 cd04962 GT1_like_5 This family 100.0 3.1E-35 6.7E-40 338.5 37.2 365 170-669 1-371 (371)
25 cd03791 GT1_Glycogen_synthase_ 100.0 2.8E-35 6.1E-40 351.5 36.7 434 171-667 1-475 (476)
26 cd03818 GT1_ExpC_like This fam 100.0 6.1E-35 1.3E-39 340.4 38.1 387 171-664 1-396 (396)
27 TIGR03088 stp2 sugar transfera 100.0 5E-34 1.1E-38 329.8 39.6 367 170-669 2-373 (374)
28 PRK15484 lipopolysaccharide 1, 100.0 5.9E-34 1.3E-38 329.9 37.5 370 170-669 3-378 (380)
29 cd03805 GT1_ALG2_like This fam 100.0 6.6E-34 1.4E-38 330.5 37.6 386 170-662 1-392 (392)
30 TIGR02398 gluc_glyc_Psyn gluco 100.0 4.4E-35 9.6E-40 340.7 23.6 358 251-668 69-482 (487)
31 PRK15179 Vi polysaccharide bio 100.0 4.2E-33 9.1E-38 337.8 40.3 391 166-667 277-692 (694)
32 cd03788 GT1_TPS Trehalose-6-Ph 100.0 4.1E-35 8.9E-40 346.2 22.1 354 250-666 67-459 (460)
33 cd04955 GT1_like_6 This family 100.0 1.6E-32 3.4E-37 314.4 38.3 359 171-667 1-363 (363)
34 cd05844 GT1_like_7 Glycosyltra 100.0 1E-32 2.2E-37 317.1 34.8 278 303-664 81-366 (367)
35 cd03792 GT1_Trehalose_phosphor 100.0 3.4E-33 7.3E-38 322.9 30.0 366 171-668 1-371 (372)
36 cd03813 GT1_like_3 This family 100.0 5.2E-32 1.1E-36 322.5 40.9 293 303-667 172-475 (475)
37 PRK10117 trehalose-6-phosphate 100.0 1.1E-33 2.4E-38 325.2 24.6 362 250-672 59-457 (474)
38 PRK15490 Vi polysaccharide bio 100.0 2.7E-32 5.8E-37 316.1 35.9 385 171-668 163-575 (578)
39 PF05116 S6PP: Sucrose-6F-phos 100.0 1.8E-33 3.8E-38 304.9 21.7 244 751-1023 4-247 (247)
40 cd03819 GT1_WavL_like This fam 100.0 9.6E-32 2.1E-36 307.2 36.9 341 194-657 9-354 (355)
41 cd03795 GT1_like_4 This family 100.0 2.5E-31 5.4E-36 303.5 37.3 352 171-659 1-357 (357)
42 cd03814 GT1_like_2 This family 100.0 9.8E-32 2.1E-36 306.2 33.8 361 171-666 1-363 (364)
43 PLN02949 transferase, transfer 100.0 3.2E-31 6.9E-36 311.6 37.3 410 159-671 24-459 (463)
44 cd03802 GT1_AviGT4_like This f 100.0 3.3E-31 7.1E-36 300.2 36.1 331 170-667 1-335 (335)
45 cd03821 GT1_Bme6_like This fam 100.0 3.5E-31 7.6E-36 301.5 35.1 370 171-663 1-374 (375)
46 cd03806 GT1_ALG11_like This fa 100.0 5.9E-31 1.3E-35 308.3 37.2 372 193-659 12-417 (419)
47 cd03794 GT1_wbuB_like This fam 100.0 7.1E-31 1.5E-35 300.3 36.8 385 171-663 1-394 (394)
48 cd03799 GT1_amsK_like This is 100.0 5.6E-31 1.2E-35 300.3 35.9 345 171-661 1-354 (355)
49 PRK09922 UDP-D-galactose:(gluc 100.0 2.6E-31 5.7E-36 305.7 32.5 347 170-671 1-358 (359)
50 cd03817 GT1_UGDG_like This fam 100.0 1.1E-30 2.3E-35 297.8 37.3 371 171-668 1-373 (374)
51 PRK10125 putative glycosyl tra 100.0 3.8E-31 8.3E-36 307.7 34.0 364 170-669 1-405 (405)
52 TIGR01485 SPP_plant-cyano sucr 100.0 7.4E-32 1.6E-36 294.0 26.3 243 750-1023 2-248 (249)
53 cd03816 GT1_ALG1_like This fam 100.0 2E-30 4.2E-35 303.9 39.8 391 168-659 2-407 (415)
54 TIGR03087 stp1 sugar transfera 100.0 1.3E-31 2.8E-36 312.5 29.4 382 172-668 1-396 (397)
55 cd03822 GT1_ecORF704_like This 100.0 1.5E-30 3.2E-35 297.1 37.2 355 171-666 1-365 (366)
56 cd03812 GT1_CapH_like This fam 100.0 9.7E-31 2.1E-35 299.2 34.0 344 171-650 1-346 (358)
57 PLN02382 probable sucrose-phos 100.0 1E-31 2.2E-36 310.5 25.7 245 750-1023 10-261 (413)
58 cd04951 GT1_WbdM_like This fam 100.0 2.9E-30 6.3E-35 295.1 37.5 355 171-667 1-359 (360)
59 cd03807 GT1_WbnK_like This fam 100.0 3.8E-30 8.1E-35 291.9 37.8 361 171-667 1-365 (365)
60 cd03820 GT1_amsD_like This fam 100.0 3.3E-30 7.1E-35 290.0 36.6 344 171-663 1-347 (348)
61 cd03801 GT1_YqgM_like This fam 100.0 6.1E-30 1.3E-34 289.2 38.6 371 171-666 1-373 (374)
62 PLN02846 digalactosyldiacylgly 100.0 3.1E-30 6.7E-35 298.9 36.0 375 168-669 3-392 (462)
63 PRK15126 thiamin pyrimidine py 100.0 7.1E-32 1.5E-36 298.2 20.8 236 750-1021 3-261 (272)
64 cd03809 GT1_mtfB_like This fam 100.0 2E-30 4.4E-35 295.8 33.5 363 171-663 1-364 (365)
65 KOG1111 N-acetylglucosaminyltr 100.0 1.4E-31 3.1E-36 285.2 22.0 366 170-673 1-371 (426)
66 cd03825 GT1_wcfI_like This fam 100.0 1.7E-30 3.8E-35 297.5 32.6 344 170-669 1-365 (365)
67 TIGR02471 sucr_syn_bact_C sucr 100.0 3.8E-31 8.2E-36 286.2 24.6 236 751-1023 1-236 (236)
68 PRK10976 putative hydrolase; P 100.0 1.9E-31 4.2E-36 293.8 22.4 233 750-1023 3-265 (266)
69 cd03808 GT1_cap1E_like This fa 100.0 1.8E-29 3.9E-34 285.2 38.8 347 194-663 9-358 (359)
70 PRK10513 sugar phosphate phosp 100.0 1.4E-31 3.1E-36 295.5 20.1 234 749-1023 3-269 (270)
71 cd03798 GT1_wlbH_like This fam 100.0 2.2E-29 4.7E-34 285.8 37.0 362 194-669 13-377 (377)
72 cd03823 GT1_ExpE7_like This fa 100.0 2.4E-29 5.2E-34 285.7 36.2 355 171-667 1-358 (359)
73 COG0380 OtsA Trehalose-6-phosp 100.0 3.6E-31 7.8E-36 302.4 20.8 346 264-668 102-479 (486)
74 COG0561 Cof Predicted hydrolas 100.0 7E-31 1.5E-35 289.0 21.4 231 749-1023 3-262 (264)
75 PF00982 Glyco_transf_20: Glyc 100.0 2.7E-31 5.8E-36 310.0 15.2 360 249-667 72-473 (474)
76 cd04946 GT1_AmsK_like This fam 100.0 2.7E-28 5.9E-33 285.1 36.3 276 303-663 126-406 (407)
77 TIGR01482 SPP-subfamily Sucros 100.0 3.7E-30 7.9E-35 276.4 18.9 221 752-1022 1-225 (225)
78 PF00862 Sucrose_synth: Sucros 100.0 1.5E-30 3.4E-35 290.6 15.7 248 167-438 270-531 (550)
79 KOG1050 Trehalose-6-phosphate 100.0 2.9E-28 6.3E-33 292.4 36.0 538 287-965 128-692 (732)
80 PRK01158 phosphoglycolate phos 100.0 1.9E-29 4.1E-34 271.8 22.0 227 749-1023 3-230 (230)
81 PLN02887 hydrolase family prot 100.0 1.2E-29 2.6E-34 301.1 22.1 234 748-1022 307-579 (580)
82 TIGR02918 accessory Sec system 100.0 5.2E-28 1.1E-32 287.1 32.9 281 303-669 210-500 (500)
83 cd03811 GT1_WabH_like This fam 100.0 1E-27 2.2E-32 269.9 33.5 346 171-654 1-352 (353)
84 cd03804 GT1_wbaZ_like This fam 100.0 4.5E-28 9.8E-33 277.6 31.1 264 303-662 82-350 (351)
85 COG0297 GlgA Glycogen synthase 100.0 2.4E-28 5.2E-33 283.0 28.8 440 170-673 1-482 (487)
86 PLN02275 transferase, transfer 100.0 3E-27 6.5E-32 273.1 35.0 333 196-633 16-371 (371)
87 PRK03669 mannosyl-3-phosphogly 100.0 1.3E-28 2.8E-33 271.8 20.9 233 749-1021 7-267 (271)
88 PLN02501 digalactosyldiacylgly 100.0 6.9E-27 1.5E-31 272.8 34.9 381 159-667 309-708 (794)
89 PF08282 Hydrolase_3: haloacid 100.0 3.7E-28 7.9E-33 264.1 21.2 223 752-1018 1-254 (254)
90 PRK10530 pyridoxal phosphate ( 100.0 2.4E-28 5.2E-33 270.0 19.4 229 750-1022 4-271 (272)
91 TIGR00099 Cof-subfamily Cof su 100.0 1.3E-27 2.9E-32 261.8 19.3 224 751-1018 1-256 (256)
92 TIGR01486 HAD-SF-IIB-MPGP mann 100.0 1.8E-27 3.9E-32 260.6 19.9 229 751-1021 1-255 (256)
93 cd03793 GT1_Glycogen_synthase_ 99.9 3.4E-26 7.3E-31 265.5 27.7 324 303-671 147-589 (590)
94 TIGR01487 SPP-like sucrose-pho 99.9 7.7E-27 1.7E-31 248.9 19.0 213 751-1018 3-215 (215)
95 cd04949 GT1_gtfA_like This fam 99.9 5.7E-26 1.2E-30 262.3 27.1 273 303-662 98-372 (372)
96 PHA01630 putative group 1 glyc 99.9 6.1E-26 1.3E-30 256.6 26.5 255 310-668 52-330 (331)
97 PRK00726 murG undecaprenyldiph 99.9 1.6E-24 3.5E-29 249.1 32.3 344 170-667 2-356 (357)
98 PRK00192 mannosyl-3-phosphogly 99.9 2.8E-25 6.1E-30 245.6 19.9 234 749-1021 4-269 (273)
99 PHA01633 putative glycosyl tra 99.9 1.2E-23 2.6E-28 235.5 31.5 221 372-664 90-335 (335)
100 cd03785 GT1_MurG MurG is an N- 99.9 1.4E-23 3E-28 240.3 31.9 330 194-660 9-349 (350)
101 TIGR01133 murG undecaprenyldip 99.9 2.8E-23 6E-28 237.6 30.9 327 194-660 10-346 (348)
102 PTZ00174 phosphomannomutase; P 99.9 5.4E-23 1.2E-27 223.8 19.8 215 749-987 5-242 (247)
103 TIGR02463 MPGP_rel mannosyl-3- 99.9 9.3E-23 2E-27 218.4 18.4 204 751-972 1-221 (221)
104 PRK10187 trehalose-6-phosphate 99.9 4.6E-22 9.9E-27 218.2 19.5 199 750-979 15-223 (266)
105 PRK14502 bifunctional mannosyl 99.9 1.7E-21 3.6E-26 229.8 24.1 246 739-1021 406-689 (694)
106 PRK05749 3-deoxy-D-manno-octul 99.9 6.8E-21 1.5E-25 224.3 29.2 283 303-670 123-421 (425)
107 TIGR01484 HAD-SF-IIB HAD-super 99.9 9.1E-22 2E-26 208.1 17.5 197 751-971 1-204 (204)
108 cd04950 GT1_like_1 Glycosyltra 99.9 1.4E-19 3.1E-24 209.3 32.2 265 303-668 101-371 (373)
109 PRK13609 diacylglycerol glucos 99.9 2.2E-19 4.7E-24 208.4 31.7 263 303-669 103-372 (380)
110 PLN02605 monogalactosyldiacylg 99.9 3.1E-19 6.7E-24 207.2 31.2 264 303-666 99-379 (382)
111 PF00534 Glycos_transf_1: Glyc 99.8 1.4E-20 3.1E-25 192.8 13.9 161 473-649 11-172 (172)
112 PRK13608 diacylglycerol glucos 99.8 4.2E-19 9E-24 206.6 27.3 267 303-672 103-375 (391)
113 TIGR02461 osmo_MPG_phos mannos 99.8 3.7E-20 8.1E-25 198.2 14.9 200 751-972 1-225 (225)
114 PLN02423 phosphomannomutase 99.8 1.5E-19 3.4E-24 195.9 18.4 205 746-972 4-231 (245)
115 KOG1387 Glycosyltransferase [C 99.8 2.5E-17 5.5E-22 175.2 29.9 389 192-672 54-462 (465)
116 PRK12702 mannosyl-3-phosphogly 99.8 1.4E-18 3.1E-23 186.5 18.9 242 751-1021 3-293 (302)
117 TIGR00685 T6PP trehalose-phosp 99.8 1.4E-17 3E-22 181.0 17.5 218 752-1021 6-242 (244)
118 COG0438 RfaG Glycosyltransfera 99.7 9.6E-16 2.1E-20 171.2 30.2 288 305-671 84-379 (381)
119 cd01635 Glycosyltransferase_GT 99.7 1.5E-16 3.1E-21 168.8 22.2 119 482-617 109-229 (229)
120 PLN03017 trehalose-phosphatase 99.7 1.2E-16 2.7E-21 178.3 20.1 201 750-972 112-333 (366)
121 TIGR02094 more_P_ylases alpha- 99.7 2.5E-16 5.4E-21 189.4 24.2 337 303-666 160-598 (601)
122 PLN02580 trehalose-phosphatase 99.7 1.3E-16 2.9E-21 179.8 19.9 204 752-982 122-357 (384)
123 PRK09814 beta-1,6-galactofuran 99.7 2.6E-15 5.6E-20 171.1 29.7 244 303-660 62-323 (333)
124 TIGR00236 wecB UDP-N-acetylglu 99.7 1.6E-16 3.5E-21 183.4 17.6 283 286-664 75-363 (365)
125 PRK00025 lpxB lipid-A-disaccha 99.7 3.7E-15 8E-20 172.9 25.5 171 470-668 179-373 (380)
126 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 3.2E-15 7E-20 172.1 23.8 250 303-642 87-344 (363)
127 PLN02151 trehalose-phosphatase 99.7 2E-15 4.4E-20 168.2 18.1 199 751-972 100-319 (354)
128 KOG2941 Beta-1,4-mannosyltrans 99.6 4.9E-13 1.1E-17 143.1 32.6 402 166-659 9-432 (444)
129 COG1877 OtsB Trehalose-6-phosp 99.6 4.1E-14 8.9E-19 152.3 16.9 204 740-972 11-228 (266)
130 cd04299 GT1_Glycogen_Phosphory 99.6 1.7E-13 3.6E-18 167.7 23.6 187 473-667 474-688 (778)
131 TIGR03713 acc_sec_asp1 accesso 99.6 7.3E-14 1.6E-18 166.4 19.2 167 478-665 320-518 (519)
132 PF02358 Trehalose_PPase: Treh 99.6 6.8E-15 1.5E-19 159.1 9.5 193 754-972 2-216 (235)
133 PF05693 Glycogen_syn: Glycoge 99.5 4.5E-13 9.8E-18 155.4 22.0 326 304-672 143-585 (633)
134 PF13692 Glyco_trans_1_4: Glyc 99.4 2.2E-13 4.7E-18 133.7 6.5 131 477-635 2-135 (135)
135 COG3769 Predicted hydrolase (H 99.4 1.7E-11 3.6E-16 123.8 15.9 245 746-1021 4-270 (274)
136 TIGR00215 lpxB lipid-A-disacch 99.3 1.1E-10 2.4E-15 135.5 24.4 250 303-650 88-366 (385)
137 PF13579 Glyco_trans_4_4: Glyc 99.3 2.2E-11 4.8E-16 121.8 11.2 160 195-428 1-160 (160)
138 PF13524 Glyco_trans_1_2: Glyc 99.3 2.9E-11 6.2E-16 110.7 10.3 91 572-664 1-92 (92)
139 PRK12446 undecaprenyldiphospho 99.3 9.4E-09 2E-13 117.9 33.1 308 194-640 11-330 (352)
140 PF13439 Glyco_transf_4: Glyco 99.2 2.3E-11 4.9E-16 123.9 10.2 168 192-434 9-176 (177)
141 COG0707 MurG UDP-N-acetylgluco 99.2 1.8E-08 4E-13 114.6 31.9 327 194-661 10-350 (357)
142 PF08323 Glyco_transf_5: Starc 99.2 4.1E-11 8.8E-16 130.3 7.4 206 171-393 1-234 (245)
143 TIGR02919 accessory Sec system 99.1 1E-08 2.2E-13 119.9 23.2 194 373-656 238-432 (438)
144 TIGR01670 YrbI-phosphatas 3-de 99.1 5.6E-10 1.2E-14 112.6 9.7 72 927-1021 76-148 (154)
145 TIGR02726 phenyl_P_delta pheny 99.0 6.5E-10 1.4E-14 113.2 8.7 69 927-1018 82-150 (169)
146 PRK09484 3-deoxy-D-manno-octul 99.0 9.9E-10 2.1E-14 114.1 8.3 137 748-1020 20-166 (183)
147 cd03784 GT1_Gtf_like This fami 98.9 1.7E-07 3.7E-12 109.7 25.5 127 475-636 238-373 (401)
148 PRK11133 serB phosphoserine ph 98.8 4.4E-09 9.5E-14 118.3 7.4 71 925-1019 246-316 (322)
149 PF09314 DUF1972: Domain of un 98.8 3.8E-07 8.2E-12 93.6 19.3 180 171-430 3-185 (185)
150 COG1519 KdtA 3-deoxy-D-manno-o 98.8 6.6E-06 1.4E-10 93.0 30.6 264 303-651 122-402 (419)
151 TIGR01426 MGT glycosyltransfer 98.8 3E-06 6.6E-11 99.0 29.2 111 544-665 273-389 (392)
152 TIGR03492 conserved hypothetic 98.7 3.4E-06 7.4E-11 98.4 27.5 151 487-662 218-392 (396)
153 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 5E-06 1.1E-10 96.0 26.5 241 303-637 92-340 (365)
154 PF13528 Glyco_trans_1_3: Glyc 98.6 5.9E-06 1.3E-10 93.5 23.4 118 475-632 191-317 (318)
155 TIGR00661 MJ1255 conserved hyp 98.6 1.2E-05 2.7E-10 91.2 24.6 112 490-636 198-315 (321)
156 smart00775 LNS2 LNS2 domain. T 98.5 1.3E-07 2.8E-12 95.5 7.1 70 751-827 1-89 (157)
157 PF13477 Glyco_trans_4_2: Glyc 98.5 2.1E-06 4.5E-11 84.6 14.2 128 198-382 10-139 (139)
158 cd01427 HAD_like Haloacid deha 98.5 3.2E-07 6.9E-12 89.1 7.7 128 752-970 2-138 (139)
159 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.4 1.5E-06 3.2E-11 94.9 12.3 193 751-972 3-223 (249)
160 COG1778 Low specificity phosph 98.3 7.6E-07 1.6E-11 86.4 5.8 54 927-987 83-136 (170)
161 TIGR03590 PseG pseudaminic aci 98.3 5.2E-05 1.1E-09 84.3 21.2 98 477-601 171-268 (279)
162 PHA03392 egt ecdysteroid UDP-g 98.2 0.00075 1.6E-08 81.2 29.9 165 467-667 286-465 (507)
163 KOG3189 Phosphomannomutase [Li 98.2 5.1E-06 1.1E-10 83.3 9.3 197 751-963 13-227 (252)
164 COG0560 SerB Phosphoserine pho 98.1 1E-05 2.2E-10 85.8 10.2 62 918-987 135-196 (212)
165 PF02350 Epimerase_2: UDP-N-ac 98.1 0.00011 2.3E-09 84.3 19.1 261 285-641 55-324 (346)
166 COG0381 WecB UDP-N-acetylgluco 98.1 0.00087 1.9E-08 75.6 25.4 363 169-668 3-370 (383)
167 TIGR01684 viral_ppase viral ph 98.1 8E-06 1.7E-10 88.7 8.1 71 751-827 128-201 (301)
168 PF04007 DUF354: Protein of un 98.1 0.00077 1.7E-08 76.3 23.8 66 558-634 241-309 (335)
169 PLN02448 UDP-glycosyltransfera 98.0 0.0045 9.9E-08 73.8 30.8 94 546-648 323-429 (459)
170 TIGR01689 EcbF-BcbF capsule bi 98.0 1.3E-05 2.9E-10 77.2 7.4 56 751-810 3-79 (126)
171 COG4641 Uncharacterized protei 98.0 0.0011 2.4E-08 74.1 23.3 125 542-672 233-365 (373)
172 PF03332 PMM: Eukaryotic phosp 98.0 1.2E-05 2.6E-10 83.6 6.5 183 772-972 2-206 (220)
173 KOG3742 Glycogen synthase [Car 97.9 0.00011 2.4E-09 82.0 13.1 108 558-670 493-614 (692)
174 PF13844 Glyco_transf_41: Glyc 97.9 0.00011 2.4E-09 85.8 12.9 185 465-669 273-467 (468)
175 TIGR01452 PGP_euk phosphoglyco 97.9 9.8E-05 2.1E-09 82.1 12.1 66 751-822 4-72 (279)
176 PRK10444 UMP phosphatase; Prov 97.8 0.00025 5.4E-09 77.3 14.1 65 751-821 3-70 (248)
177 PHA03398 viral phosphatase sup 97.8 6.1E-05 1.3E-09 82.1 8.2 72 751-828 130-204 (303)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.8 8E-05 1.7E-09 81.7 8.9 66 751-821 3-74 (257)
179 COG1819 Glycosyl transferases, 97.7 0.0013 2.9E-08 77.0 19.4 97 542-650 280-382 (406)
180 PLN02208 glycosyltransferase f 97.7 0.17 3.6E-06 60.1 35.5 94 547-649 312-416 (442)
181 PLN03007 UDP-glucosyltransfera 97.6 0.24 5.2E-06 59.6 36.8 140 476-636 285-441 (482)
182 PLN02670 transferase, transfer 97.6 0.092 2E-06 62.6 32.7 184 466-670 266-467 (472)
183 PRK10671 copA copper exporting 97.4 0.00053 1.1E-08 87.9 10.5 65 928-1019 701-765 (834)
184 COG3980 spsG Spore coat polysa 97.4 0.013 2.9E-07 62.9 18.8 138 475-643 157-301 (318)
185 TIGR01106 ATPase-IIC_X-K sodiu 97.3 0.0017 3.7E-08 84.5 14.5 40 766-809 568-607 (997)
186 PLN00414 glycosyltransferase f 97.3 0.6 1.3E-05 55.5 34.2 93 548-649 314-417 (446)
187 PF12000 Glyco_trans_4_3: Gkyc 97.3 0.0037 8E-08 63.7 13.3 146 250-434 19-170 (171)
188 PRK02797 4-alpha-L-fucosyltran 97.3 0.054 1.2E-06 59.7 22.8 166 478-671 146-319 (322)
189 PLN02562 UDP-glycosyltransfera 97.3 0.37 8E-06 57.4 31.8 139 476-641 273-419 (448)
190 PRK10017 colanic acid biosynth 97.2 0.75 1.6E-05 54.2 34.2 89 551-648 313-405 (426)
191 PF11997 DUF3492: Domain of un 97.2 0.023 5E-07 62.6 19.1 85 303-389 171-260 (268)
192 PF02684 LpxB: Lipid-A-disacch 97.2 0.034 7.3E-07 64.0 21.2 145 473-641 180-346 (373)
193 COG1817 Uncharacterized protei 97.2 0.049 1.1E-06 59.5 20.8 136 467-637 172-316 (346)
194 PLN02410 UDP-glucoronosyl/UDP- 97.1 0.98 2.1E-05 53.8 34.4 93 546-648 324-422 (451)
195 COG4671 Predicted glycosyl tra 97.1 0.31 6.6E-06 54.4 25.7 335 169-634 9-364 (400)
196 TIGR01460 HAD-SF-IIA Haloacid 97.1 0.0046 1E-07 67.0 12.0 68 753-826 2-73 (236)
197 COG0763 LpxB Lipid A disacchar 97.0 0.061 1.3E-06 60.9 20.6 153 468-648 179-357 (381)
198 TIGR01497 kdpB K+-transporting 97.0 0.003 6.6E-08 77.7 11.3 59 745-809 424-485 (675)
199 TIGR01116 ATPase-IIA1_Ca sarco 97.0 0.0038 8.2E-08 80.7 12.4 147 766-1019 537-683 (917)
200 PRK13223 phosphoglycolate phos 97.0 0.0057 1.2E-07 67.8 12.0 48 922-972 153-201 (272)
201 PLN02992 coniferyl-alcohol glu 97.0 1.4 3.1E-05 52.7 32.7 81 547-636 339-428 (481)
202 PF09210 DUF1957: Domain of un 96.9 4.4E-05 9.6E-10 70.5 -4.3 79 76-156 19-100 (102)
203 TIGR01525 ATPase-IB_hvy heavy 96.9 0.0035 7.5E-08 76.8 10.6 53 944-1019 448-500 (556)
204 PF07429 Glyco_transf_56: 4-al 96.9 0.11 2.4E-06 58.1 20.7 163 477-668 185-355 (360)
205 PF08550 DUF1752: Fungal prote 96.9 0.00041 8.8E-09 48.5 1.2 25 71-95 5-29 (29)
206 COG3660 Predicted nucleoside-d 96.9 0.093 2E-06 55.9 19.0 198 303-602 69-274 (329)
207 TIGR01647 ATPase-IIIA_H plasma 96.9 0.01 2.2E-07 75.2 14.3 151 745-987 415-571 (755)
208 TIGR01681 HAD-SF-IIIC HAD-supe 96.8 0.0021 4.5E-08 62.7 6.0 54 751-808 2-68 (128)
209 PLN02863 UDP-glucoronosyl/UDP- 96.8 1.9 4.2E-05 51.7 37.6 138 476-634 283-432 (477)
210 PRK15122 magnesium-transportin 96.8 0.021 4.6E-07 73.5 16.4 125 766-987 550-674 (903)
211 TIGR01522 ATPase-IIA2_Ca golgi 96.7 0.024 5.2E-07 73.2 16.2 62 745-810 501-568 (884)
212 PLN02764 glycosyltransferase f 96.7 2.2 4.8E-05 50.7 33.6 93 548-649 319-422 (453)
213 COG3914 Spy Predicted O-linked 96.7 0.028 6.2E-07 65.9 14.5 178 473-671 426-616 (620)
214 TIGR01524 ATPase-IIIB_Mg magne 96.7 0.014 3E-07 75.0 13.5 125 766-987 515-639 (867)
215 PRK10517 magnesium-transportin 96.6 0.016 3.4E-07 74.7 13.7 125 766-987 550-674 (902)
216 TIGR01523 ATPase-IID_K-Na pota 96.6 0.011 2.3E-07 77.3 12.3 154 766-1019 646-799 (1053)
217 COG0647 NagD Predicted sugar p 96.6 0.0095 2.1E-07 65.2 9.6 197 751-971 10-233 (269)
218 TIGR01489 DKMTPPase-SF 2,3-dik 96.6 0.014 2.9E-07 60.5 10.5 43 922-970 144-186 (188)
219 PLN02645 phosphoglycolate phos 96.6 0.0032 6.9E-08 71.2 6.2 64 751-820 30-96 (311)
220 PRK01021 lpxB lipid-A-disaccha 96.6 0.24 5.3E-06 59.8 21.9 152 469-648 405-584 (608)
221 PRK01122 potassium-transportin 96.6 0.01 2.3E-07 73.2 10.9 58 746-809 424-484 (679)
222 PRK11033 zntA zinc/cadmium/mer 96.6 0.0073 1.6E-07 76.2 9.8 60 746-809 547-607 (741)
223 PLN02173 UDP-glucosyl transfer 96.6 2.6 5.7E-05 50.1 36.4 93 546-648 317-420 (449)
224 PF06258 Mito_fiss_Elm1: Mitoc 96.4 0.039 8.4E-07 62.2 13.5 110 474-603 144-259 (311)
225 TIGR01517 ATPase-IIB_Ca plasma 96.4 0.027 5.8E-07 73.2 13.8 128 766-987 579-706 (941)
226 PRK13225 phosphoglycolate phos 96.4 0.02 4.4E-07 63.4 10.9 58 927-987 196-254 (273)
227 PRK13226 phosphoglycolate phos 96.4 0.012 2.6E-07 63.4 8.9 40 928-970 153-192 (229)
228 COG0058 GlgP Glucan phosphoryl 96.3 0.033 7.3E-07 68.2 13.2 139 474-618 484-629 (750)
229 PLN02210 UDP-glucosyl transfer 96.3 3.6 7.7E-05 49.2 33.1 136 476-637 269-417 (456)
230 PRK08238 hypothetical protein; 96.3 0.023 5.1E-07 67.7 11.5 36 945-988 141-176 (479)
231 TIGR02093 P_ylase glycogen/sta 96.3 0.016 3.4E-07 71.6 10.2 149 473-628 523-687 (794)
232 PRK14010 potassium-transportin 96.3 0.016 3.4E-07 71.6 10.2 40 766-809 441-480 (673)
233 COG0474 MgtA Cation transport 96.2 0.033 7.2E-07 71.9 12.7 129 767-987 548-676 (917)
234 PLN02554 UDP-glycosyltransfera 96.1 4.7 0.0001 48.5 35.4 83 546-637 342-443 (481)
235 TIGR01512 ATPase-IB2_Cd heavy 96.1 0.021 4.5E-07 69.6 9.8 41 765-809 361-402 (536)
236 PRK10826 2-deoxyglucose-6-phos 96.0 0.026 5.7E-07 60.4 9.1 43 927-972 149-191 (222)
237 TIGR02137 HSK-PSP phosphoserin 96.0 0.012 2.7E-07 62.1 6.3 55 924-990 129-183 (203)
238 TIGR01657 P-ATPase-V P-type AT 96.0 0.031 6.7E-07 73.5 11.2 41 766-810 656-696 (1054)
239 TIGR01662 HAD-SF-IIIA HAD-supe 95.9 0.011 2.3E-07 57.8 4.9 55 752-810 3-73 (132)
240 TIGR00338 serB phosphoserine p 95.9 0.0078 1.7E-07 64.2 4.2 53 927-987 152-204 (219)
241 PF13344 Hydrolase_6: Haloacid 95.8 0.011 2.4E-07 55.1 4.5 54 752-810 1-57 (101)
242 TIGR01491 HAD-SF-IB-PSPlk HAD- 95.8 0.0071 1.5E-07 63.4 3.7 54 926-987 146-199 (201)
243 TIGR01664 DNA-3'-Pase DNA 3'-p 95.7 0.015 3.3E-07 59.4 5.3 64 751-821 15-102 (166)
244 PF12038 DUF3524: Domain of un 95.6 0.069 1.5E-06 53.5 9.3 74 304-388 59-133 (168)
245 TIGR01449 PGP_bact 2-phosphogl 95.6 0.011 2.3E-07 62.7 3.9 41 928-971 143-183 (213)
246 TIGR01672 AphA HAD superfamily 95.6 0.04 8.6E-07 59.5 8.2 36 771-810 119-158 (237)
247 PRK13288 pyrophosphatase PpaX; 95.5 0.076 1.6E-06 56.4 10.1 44 924-970 136-179 (214)
248 TIGR01511 ATPase-IB1_Cu copper 95.4 0.052 1.1E-06 66.5 9.6 100 891-1019 407-519 (562)
249 KOG0203 Na+/K+ ATPase, alpha s 95.4 0.095 2.1E-06 63.9 11.3 152 773-993 597-749 (1019)
250 PRK14986 glycogen phosphorylas 95.4 0.053 1.2E-06 67.3 9.5 148 473-627 539-702 (815)
251 PF08288 PIGA: PIGA (GPI ancho 95.2 0.071 1.5E-06 47.4 6.9 71 249-337 13-85 (90)
252 PLN02770 haloacid dehalogenase 95.1 0.25 5.5E-06 53.9 12.8 41 927-970 165-205 (248)
253 COG2217 ZntA Cation transport 95.1 0.093 2E-06 65.2 10.2 98 892-1019 540-652 (713)
254 PLN02555 limonoid glucosyltran 95.1 11 0.00023 45.4 31.0 94 546-649 337-442 (480)
255 PLN00164 glucosyltransferase; 95.0 11 0.00024 45.3 36.1 93 548-649 341-446 (480)
256 PF04464 Glyphos_transf: CDP-G 94.9 0.79 1.7E-05 53.1 17.1 110 543-666 249-367 (369)
257 TIGR01675 plant-AP plant acid 94.8 0.069 1.5E-06 57.1 7.2 40 767-810 121-163 (229)
258 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.7 0.042 9.2E-07 59.7 5.5 64 751-819 10-75 (242)
259 PLN02167 UDP-glycosyltransfera 94.7 13 0.00029 44.6 34.8 140 476-636 280-435 (475)
260 cd04300 GT1_Glycogen_Phosphory 94.7 0.14 3E-06 63.8 10.2 148 473-627 526-689 (797)
261 PLN02534 UDP-glycosyltransfera 94.6 14 0.00031 44.5 36.1 93 547-648 345-458 (491)
262 PF08235 LNS2: LNS2 (Lipin/Ned 94.4 0.11 2.5E-06 52.0 7.1 52 752-807 2-67 (157)
263 TIGR01652 ATPase-Plipid phosph 94.2 0.38 8.2E-06 63.6 13.4 40 766-809 631-670 (1057)
264 TIGR02253 CTE7 HAD superfamily 94.2 0.44 9.6E-06 50.6 11.8 42 928-972 152-195 (221)
265 PF12710 HAD: haloacid dehalog 94.2 0.047 1E-06 56.6 4.1 38 769-810 92-129 (192)
266 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.1 0.042 9.2E-07 57.7 3.7 48 922-972 150-197 (202)
267 PLN03015 UDP-glucosyl transfer 93.8 19 0.00042 43.1 31.4 92 548-648 337-440 (470)
268 KOG0202 Ca2+ transporting ATPa 93.8 1.2 2.5E-05 55.0 15.0 51 927-987 665-715 (972)
269 PLN03190 aminophospholipid tra 93.7 0.33 7.1E-06 64.2 11.5 40 766-809 726-765 (1178)
270 PRK14089 ipid-A-disaccharide s 93.7 1.7 3.7E-05 49.8 15.8 80 489-600 182-261 (347)
271 TIGR01533 lipo_e_P4 5'-nucleot 93.6 0.18 3.9E-06 55.4 7.3 48 769-820 121-171 (266)
272 TIGR01488 HAD-SF-IB Haloacid D 93.5 0.043 9.3E-07 56.2 2.3 42 921-965 136-177 (177)
273 PRK14985 maltodextrin phosphor 93.5 0.14 3E-06 63.5 6.9 148 473-627 525-688 (798)
274 TIGR01656 Histidinol-ppas hist 93.4 0.12 2.6E-06 51.6 5.3 54 752-809 3-81 (147)
275 PF04101 Glyco_tran_28_C: Glyc 93.3 0.066 1.4E-06 54.5 3.3 90 546-645 55-154 (167)
276 COG0546 Gph Predicted phosphat 93.3 0.55 1.2E-05 50.2 10.4 42 928-972 147-191 (220)
277 PRK11009 aphA acid phosphatase 93.2 0.35 7.7E-06 52.2 8.8 37 770-810 118-158 (237)
278 KOG0210 P-type ATPase [Inorgan 93.0 0.65 1.4E-05 55.6 10.9 41 926-972 767-808 (1051)
279 PHA02530 pseT polynucleotide k 92.9 0.12 2.5E-06 58.1 4.9 55 751-809 160-226 (300)
280 PLN02575 haloacid dehalogenase 92.8 0.62 1.3E-05 53.8 10.5 42 928-972 274-315 (381)
281 PF00702 Hydrolase: haloacid d 92.8 0.29 6.3E-06 51.5 7.4 40 766-809 127-166 (215)
282 TIGR01668 YqeG_hyp_ppase HAD s 92.7 0.22 4.7E-06 51.1 6.2 56 750-809 26-83 (170)
283 TIGR02252 DREG-2 REG-2-like, H 92.6 0.88 1.9E-05 47.7 10.9 39 929-970 163-202 (203)
284 TIGR01685 MDP-1 magnesium-depe 92.6 0.24 5.3E-06 50.9 6.3 39 767-809 46-85 (174)
285 PLN02152 indole-3-acetate beta 92.5 29 0.00062 41.5 32.3 146 476-637 261-419 (455)
286 PF00343 Phosphorylase: Carboh 92.4 0.77 1.7E-05 56.6 11.1 146 473-626 440-602 (713)
287 PF00201 UDPGT: UDP-glucoronos 92.2 0.2 4.4E-06 60.5 6.1 84 546-638 323-412 (500)
288 PF11440 AGT: DNA alpha-glucos 91.7 23 0.00051 38.6 19.9 139 481-635 187-353 (355)
289 TIGR00213 GmhB_yaeD D,D-heptos 91.3 0.38 8.1E-06 49.5 6.0 35 932-969 112-146 (176)
290 PF06437 ISN1: IMP-specific 5' 91.2 0.89 1.9E-05 51.3 8.9 212 748-972 146-399 (408)
291 PLN02940 riboflavin kinase 91.1 0.46 9.9E-06 55.4 7.1 42 928-972 152-194 (382)
292 TIGR01422 phosphonatase phosph 91.1 0.63 1.4E-05 50.8 7.8 42 928-972 158-201 (253)
293 PRK10748 flavin mononucleotide 90.9 0.3 6.4E-06 53.0 5.0 42 928-972 165-207 (238)
294 TIGR01663 PNK-3'Pase polynucle 90.9 0.41 8.8E-06 57.7 6.4 64 751-821 170-257 (526)
295 TIGR01261 hisB_Nterm histidino 90.5 0.5 1.1E-05 48.0 5.9 55 752-810 4-84 (161)
296 PRK08942 D,D-heptose 1,7-bisph 90.3 0.66 1.4E-05 47.9 6.7 37 931-970 108-144 (181)
297 TIGR03351 PhnX-like phosphonat 89.9 1.3 2.8E-05 47.1 8.8 39 767-809 88-126 (220)
298 PF03033 Glyco_transf_28: Glyc 89.8 0.38 8.3E-06 47.0 4.3 116 194-336 8-130 (139)
299 smart00577 CPDc catalytic doma 89.7 0.69 1.5E-05 46.2 6.1 37 768-809 47-83 (148)
300 KOG0204 Calcium transporting A 89.5 2.3 5E-05 52.6 11.1 39 767-809 648-686 (1034)
301 TIGR01686 FkbH FkbH-like domai 89.4 0.9 1.9E-05 51.6 7.5 64 751-819 5-83 (320)
302 PF05152 DUF705: Protein of un 89.1 1.2 2.6E-05 48.5 7.6 64 751-820 124-191 (297)
303 KOG2882 p-Nitrophenyl phosphat 89.1 2.8 6.1E-05 46.1 10.4 51 931-985 229-281 (306)
304 KOG1615 Phosphoserine phosphat 89.0 0.84 1.8E-05 46.8 5.9 41 766-810 88-128 (227)
305 TIGR01494 ATPase_P-type ATPase 88.6 1.5 3.3E-05 53.1 9.1 39 766-808 347-385 (499)
306 PRK13222 phosphoglycolate phos 88.4 0.86 1.9E-05 48.5 6.2 43 927-972 150-193 (226)
307 TIGR01680 Veg_Stor_Prot vegeta 88.2 1.2 2.5E-05 48.8 6.9 39 768-810 147-188 (275)
308 COG2179 Predicted hydrolase of 87.3 1.5 3.2E-05 44.1 6.4 55 752-810 31-86 (175)
309 PRK11590 hypothetical protein; 87.3 0.73 1.6E-05 48.9 4.7 51 923-984 159-209 (211)
310 PRK06769 hypothetical protein; 87.3 0.94 2E-05 46.5 5.4 42 751-796 6-54 (173)
311 PRK06698 bifunctional 5'-methy 86.9 3.5 7.6E-05 49.3 10.7 39 927-970 386-424 (459)
312 TIGR01456 CECR5 HAD-superfamil 86.8 1 2.2E-05 51.3 5.7 60 751-811 2-65 (321)
313 PF03767 Acid_phosphat_B: HAD 85.6 0.76 1.6E-05 49.5 3.7 60 747-810 70-158 (229)
314 PLN02954 phosphoserine phospha 85.5 1.2 2.6E-05 47.4 5.3 43 924-971 152-194 (224)
315 PRK13582 thrH phosphoserine ph 84.6 0.94 2E-05 47.5 3.9 34 936-972 137-170 (205)
316 COG4370 Uncharacterized protei 84.6 21 0.00047 39.4 13.8 142 486-650 237-394 (412)
317 TIGR01545 YfhB_g-proteo haloac 84.6 1.1 2.5E-05 47.5 4.5 50 924-984 159-208 (210)
318 KOG0207 Cation transport ATPas 84.4 4 8.7E-05 51.1 9.4 57 918-987 766-822 (951)
319 PRK05446 imidazole glycerol-ph 83.6 1.9 4E-05 49.5 5.9 58 747-810 2-85 (354)
320 PTZ00445 p36-lilke protein; Pr 83.5 1.4 3E-05 46.2 4.4 47 923-972 158-205 (219)
321 COG4087 Soluble P-type ATPase 82.9 1.9 4.1E-05 41.5 4.6 42 942-987 92-133 (152)
322 PF04413 Glycos_transf_N: 3-De 82.7 10 0.00022 39.5 10.4 73 304-392 95-167 (186)
323 TIGR00338 serB phosphoserine p 82.7 2.1 4.5E-05 45.5 5.5 36 771-810 90-125 (219)
324 COG2327 WcaK Polysaccharide py 82.1 1.1E+02 0.0023 35.6 27.3 84 546-638 266-354 (385)
325 PLN03004 UDP-glycosyltransfera 80.6 4.4 9.6E-05 48.2 7.8 143 475-637 269-426 (451)
326 COG4996 Predicted phosphatase 79.4 4.5 9.6E-05 38.9 5.7 47 768-819 43-89 (164)
327 PF09419 PGP_phosphatase: Mito 79.3 4 8.7E-05 41.6 5.9 60 748-810 40-108 (168)
328 KOG4626 O-linked N-acetylgluco 78.6 16 0.00034 44.0 11.0 178 474-672 756-944 (966)
329 PF12689 Acid_PPase: Acid Phos 78.3 3.4 7.4E-05 42.2 5.1 38 768-809 47-85 (169)
330 PF08660 Alg14: Oligosaccharid 78.2 11 0.00024 38.6 8.8 63 303-387 91-159 (170)
331 PF08645 PNK3P: Polynucleotide 78.1 1.7 3.6E-05 44.1 2.8 56 751-810 2-83 (159)
332 PF13242 Hydrolase_like: HAD-h 77.8 3.9 8.5E-05 35.5 4.7 42 930-973 8-50 (75)
333 COG1543 Uncharacterized conser 77.8 0.45 9.7E-06 54.9 -1.6 72 83-156 425-499 (504)
334 KOG0208 Cation transport ATPas 77.6 6.2 0.00013 49.8 7.8 41 765-809 704-744 (1140)
335 PF10087 DUF2325: Uncharacteri 75.8 7.1 0.00015 35.9 6.1 81 513-608 3-90 (97)
336 KOG1192 UDP-glucuronosyl and U 75.2 62 0.0013 38.9 15.8 161 477-666 278-453 (496)
337 PF05159 Capsule_synth: Capsul 74.7 24 0.00053 38.8 11.2 122 475-625 115-244 (269)
338 TIGR03609 S_layer_CsaB polysac 74.6 1.5E+02 0.0032 33.1 17.6 40 552-600 237-276 (298)
339 PF06888 Put_Phosphatase: Puta 74.0 4.4 9.5E-05 43.7 4.8 48 923-972 146-196 (234)
340 TIGR01662 HAD-SF-IIIA HAD-supe 72.8 14 0.00029 35.7 7.6 41 927-970 86-128 (132)
341 TIGR03333 salvage_mtnX 2-hydro 72.7 3.6 7.7E-05 43.7 3.7 38 926-970 143-180 (214)
342 KOG0206 P-type ATPase [General 71.8 15 0.00033 48.1 9.5 39 767-809 652-690 (1151)
343 COG0241 HisB Histidinol phosph 71.7 6.9 0.00015 40.4 5.3 56 751-810 7-86 (181)
344 COG4030 Uncharacterized protei 71.2 6.5 0.00014 41.3 4.9 54 927-987 191-246 (315)
345 TIGR01454 AHBA_synth_RP 3-amin 70.8 4.1 8.9E-05 42.7 3.7 41 927-970 132-172 (205)
346 TIGR02250 FCP1_euk FCP1-like p 69.9 12 0.00027 37.7 6.7 36 769-809 61-96 (156)
347 TIGR01544 HAD-SF-IE haloacid d 69.6 11 0.00024 41.7 6.7 59 926-987 191-255 (277)
348 COG4359 Uncharacterized conser 69.2 9.4 0.0002 39.0 5.4 38 767-808 74-111 (220)
349 PLN02207 UDP-glycosyltransfera 68.4 25 0.00054 42.2 9.9 133 476-634 275-425 (468)
350 TIGR01261 hisB_Nterm histidino 66.9 8.5 0.00018 39.0 4.8 73 896-972 73-146 (161)
351 PF03031 NIF: NLI interacting 66.1 7 0.00015 39.2 4.1 53 751-808 2-73 (159)
352 TIGR01656 Histidinol-ppas hist 65.4 11 0.00023 37.4 5.2 43 926-971 101-143 (147)
353 PLN02770 haloacid dehalogenase 65.1 10 0.00022 41.3 5.4 48 769-821 111-158 (248)
354 PRK13582 thrH phosphoserine ph 64.9 8.4 0.00018 40.3 4.6 33 773-810 75-107 (205)
355 TIGR01990 bPGM beta-phosphoglu 64.5 12 0.00027 38.2 5.6 41 927-970 142-182 (185)
356 KOG1021 Acetylglucosaminyltran 63.9 47 0.001 39.9 11.1 72 556-634 334-408 (464)
357 PF15024 Glyco_transf_18: Glyc 63.8 44 0.00096 40.3 10.5 152 476-667 276-454 (559)
358 PRK10725 fructose-1-P/6-phosph 63.7 6.9 0.00015 40.3 3.6 40 928-970 144-183 (188)
359 COG0546 Gph Predicted phosphat 63.7 9.8 0.00021 40.6 4.9 46 769-819 92-137 (220)
360 TIGR01548 HAD-SF-IA-hyp1 haloa 63.5 12 0.00026 39.0 5.4 45 771-820 111-155 (197)
361 PRK09552 mtnX 2-hydroxy-3-keto 63.5 5.8 0.00013 42.2 3.0 38 926-970 147-184 (219)
362 PF10933 DUF2827: Protein of u 62.5 2.9E+02 0.0063 31.8 22.6 117 536-665 241-362 (364)
363 KOG3120 Predicted haloacid deh 60.9 8.1 0.00017 40.7 3.3 51 920-972 156-209 (256)
364 PRK13288 pyrophosphatase PpaX; 59.8 13 0.00027 39.3 4.8 46 769-819 85-130 (214)
365 PF06941 NT5C: 5' nucleotidase 59.1 7.3 0.00016 40.6 2.8 35 769-807 76-117 (191)
366 PF03016 Exostosin: Exostosin 58.8 8.2 0.00018 43.0 3.4 70 557-630 228-300 (302)
367 TIGR01449 PGP_bact 2-phosphogl 58.7 13 0.00029 38.9 4.8 47 769-820 88-134 (213)
368 PRK10422 lipopolysaccharide co 57.9 1.1E+02 0.0023 35.2 12.4 104 476-600 183-288 (352)
369 PRK14988 GMP/IMP nucleotidase; 57.3 28 0.0006 37.3 6.9 42 928-972 151-194 (224)
370 TIGR02245 HAD_IIID1 HAD-superf 56.6 23 0.00049 37.2 5.9 59 744-809 18-83 (195)
371 KOG0209 P-type ATPase [Inorgan 56.0 8.1 0.00018 47.8 2.7 39 767-809 676-714 (1160)
372 TIGR01454 AHBA_synth_RP 3-amin 56.0 14 0.0003 38.7 4.4 47 769-820 78-124 (205)
373 COG3882 FkbH Predicted enzyme 55.9 29 0.00063 40.8 6.9 57 745-807 220-292 (574)
374 PRK08942 D,D-heptose 1,7-bisph 54.3 10 0.00022 39.0 2.9 42 751-796 5-55 (181)
375 TIGR02253 CTE7 HAD superfamily 53.3 16 0.00034 38.7 4.3 47 769-820 97-143 (221)
376 PRK06769 hypothetical protein; 52.8 30 0.00064 35.4 6.0 42 928-972 95-136 (173)
377 PF13419 HAD_2: Haloacid dehal 52.5 15 0.00031 36.7 3.7 46 769-819 80-125 (176)
378 PLN03243 haloacid dehalogenase 52.2 19 0.00042 39.5 4.8 46 769-819 112-157 (260)
379 COG2216 KdpB High-affinity K+ 52.0 9.7 0.00021 44.8 2.4 50 927-987 497-546 (681)
380 PF04230 PS_pyruv_trans: Polys 51.9 3E+02 0.0066 29.2 14.3 46 546-600 238-283 (286)
381 PLN02575 haloacid dehalogenase 51.9 18 0.00039 42.0 4.6 47 769-820 219-265 (381)
382 PLN02779 haloacid dehalogenase 51.9 12 0.00027 41.7 3.2 41 929-972 205-245 (286)
383 TIGR01422 phosphonatase phosph 51.8 20 0.00043 39.0 4.8 47 769-820 102-149 (253)
384 TIGR00213 GmhB_yaeD D,D-heptos 51.3 39 0.00085 34.5 6.7 52 893-948 30-87 (176)
385 PF06888 Put_Phosphatase: Puta 50.8 37 0.0008 36.7 6.5 48 770-820 75-122 (234)
386 PRK10826 2-deoxyglucose-6-phos 50.5 22 0.00048 37.7 4.8 48 768-820 94-141 (222)
387 TIGR01993 Pyr-5-nucltdase pyri 49.9 18 0.00039 37.1 3.9 40 928-970 143-182 (184)
388 TIGR01428 HAD_type_II 2-haloal 48.4 24 0.00051 36.7 4.6 46 769-819 95-140 (198)
389 TIGR02009 PGMB-YQAB-SF beta-ph 48.0 19 0.0004 36.8 3.7 45 768-819 90-134 (185)
390 TIGR02195 heptsyl_trn_II lipop 47.6 94 0.002 35.2 9.7 102 475-600 172-277 (334)
391 PRK13222 phosphoglycolate phos 47.3 31 0.00066 36.5 5.4 47 768-819 95-141 (226)
392 PLN02779 haloacid dehalogenase 47.2 14 0.00029 41.3 2.7 29 749-777 40-69 (286)
393 TIGR03351 PhnX-like phosphonat 46.8 17 0.00036 38.5 3.2 40 928-970 147-187 (220)
394 PLN03243 haloacid dehalogenase 46.6 41 0.0009 36.9 6.3 41 928-971 167-207 (260)
395 PF13419 HAD_2: Haloacid dehal 45.3 13 0.00029 37.0 2.0 41 927-970 134-174 (176)
396 TIGR02251 HIF-SF_euk Dullard-l 45.0 53 0.0012 33.2 6.4 36 769-809 45-80 (162)
397 PRK11587 putative phosphatase; 45.0 25 0.00053 37.3 4.1 42 928-972 140-182 (218)
398 PRK13225 phosphoglycolate phos 45.0 29 0.00062 38.5 4.7 46 769-819 145-190 (273)
399 COG4087 Soluble P-type ATPase 45.0 23 0.00049 34.4 3.3 52 753-810 18-69 (152)
400 TIGR01428 HAD_type_II 2-haloal 44.7 19 0.00041 37.4 3.1 42 928-972 150-191 (198)
401 PLN02177 glycerol-3-phosphate 44.7 19 0.00041 43.4 3.5 41 925-972 174-214 (497)
402 smart00577 CPDc catalytic doma 44.2 24 0.00051 35.1 3.6 34 932-968 104-137 (148)
403 COG2204 AtoC Response regulato 44.0 4.6E+02 0.01 31.4 14.6 73 570-642 49-129 (464)
404 TIGR01509 HAD-SF-IA-v3 haloaci 43.9 25 0.00055 35.6 3.9 39 929-970 143-181 (183)
405 PRK13226 phosphoglycolate phos 43.9 34 0.00073 36.7 5.0 47 769-820 98-144 (229)
406 cd03789 GT1_LPS_heptosyltransf 43.7 75 0.0016 35.0 7.9 99 479-600 124-224 (279)
407 PRK13223 phosphoglycolate phos 41.9 32 0.00069 38.0 4.5 47 769-820 104-150 (272)
408 PRK13478 phosphonoacetaldehyde 41.7 36 0.00079 37.3 5.0 37 769-809 104-140 (267)
409 KOG1618 Predicted phosphatase 41.3 22 0.00048 39.5 3.0 68 742-810 28-99 (389)
410 TIGR01691 enolase-ppase 2,3-di 41.2 76 0.0016 34.0 7.1 43 927-972 153-195 (220)
411 TIGR02009 PGMB-YQAB-SF beta-ph 41.1 19 0.00042 36.7 2.5 39 928-969 144-182 (185)
412 TIGR01511 ATPase-IB1_Cu copper 40.9 35 0.00076 42.0 5.1 52 754-809 390-444 (562)
413 KOG2116 Protein involved in pl 40.6 48 0.001 40.4 5.8 72 747-829 530-615 (738)
414 TIGR01509 HAD-SF-IA-v3 haloaci 40.6 40 0.00087 34.1 4.8 46 769-820 88-133 (183)
415 TIGR01493 HAD-SF-IA-v2 Haloaci 40.6 21 0.00045 36.2 2.7 26 752-777 2-27 (175)
416 COG5083 SMP2 Uncharacterized p 40.4 22 0.00047 41.1 2.8 71 744-828 372-453 (580)
417 PRK09552 mtnX 2-hydroxy-3-keto 40.3 34 0.00074 36.3 4.4 46 767-820 75-120 (219)
418 PRK00207 sulfur transfer compl 39.4 51 0.0011 32.0 5.0 39 170-222 1-40 (128)
419 PRK14988 GMP/IMP nucleotidase; 39.4 35 0.00076 36.5 4.3 47 769-820 96-142 (224)
420 PRK11590 hypothetical protein; 39.2 46 0.001 35.1 5.1 47 769-821 98-145 (211)
421 TIGR01491 HAD-SF-IB-PSPlk HAD- 39.2 48 0.001 34.2 5.2 38 769-810 83-120 (201)
422 COG1219 ClpX ATP-dependent pro 38.9 73 0.0016 35.9 6.4 95 910-1021 93-199 (408)
423 TIGR02247 HAD-1A3-hyp Epoxide 37.7 1.2E+02 0.0026 31.6 8.0 40 929-971 155-194 (211)
424 TIGR01549 HAD-SF-IA-v1 haloaci 37.6 24 0.00052 34.8 2.5 35 927-965 119-153 (154)
425 PRK10563 6-phosphogluconate ph 37.6 24 0.00052 37.4 2.6 42 928-972 144-185 (221)
426 TIGR02244 HAD-IG-Ncltidse HAD 37.0 58 0.0013 37.3 5.7 36 768-807 186-221 (343)
427 TIGR01686 FkbH FkbH-like domai 36.8 76 0.0016 36.0 6.7 42 927-971 87-128 (320)
428 PF04392 ABC_sub_bind: ABC tra 35.9 95 0.0021 34.6 7.2 84 529-618 146-233 (294)
429 COG1887 TagB Putative glycosyl 35.6 6.1E+02 0.013 29.7 13.9 163 474-666 205-384 (388)
430 PRK06698 bifunctional 5'-methy 35.5 40 0.00087 40.3 4.4 47 769-820 333-379 (459)
431 PRK10563 6-phosphogluconate ph 35.3 33 0.00072 36.2 3.3 21 751-771 6-26 (221)
432 PRK11587 putative phosphatase; 34.7 54 0.0012 34.7 4.8 45 769-819 86-130 (218)
433 PRK10725 fructose-1-P/6-phosph 34.7 29 0.00064 35.5 2.7 27 751-777 7-33 (188)
434 TIGR01490 HAD-SF-IB-hyp1 HAD-s 34.6 70 0.0015 33.2 5.5 40 767-810 88-127 (202)
435 TIGR01549 HAD-SF-IA-v1 haloaci 34.4 52 0.0011 32.4 4.4 45 769-819 67-111 (154)
436 TIGR03333 salvage_mtnX 2-hydro 34.3 60 0.0013 34.3 5.0 38 767-808 71-108 (214)
437 TIGR02193 heptsyl_trn_I lipopo 33.9 2.7E+02 0.0059 31.2 10.6 100 476-600 179-280 (319)
438 PF06925 MGDG_synth: Monogalac 33.7 3.1E+02 0.0067 27.7 10.0 61 303-390 88-153 (169)
439 PRK09456 ?-D-glucose-1-phospha 33.1 46 0.001 34.6 3.9 43 927-972 142-184 (199)
440 COG0637 Predicted phosphatase/ 32.9 41 0.00088 35.9 3.5 40 767-810 87-126 (221)
441 TIGR00715 precor6x_red precorr 32.8 2.2E+02 0.0048 31.2 9.2 87 537-633 165-255 (256)
442 COG2179 Predicted hydrolase of 32.5 84 0.0018 32.0 5.2 81 887-972 44-138 (175)
443 PLN02940 riboflavin kinase 31.9 47 0.001 38.7 4.0 48 769-821 96-144 (382)
444 PRK10964 ADP-heptose:LPS hepto 31.4 3E+02 0.0065 31.0 10.4 46 547-601 235-280 (322)
445 TIGR01488 HAD-SF-IB Haloacid D 31.2 63 0.0014 32.6 4.4 38 769-810 76-113 (177)
446 KOG0853 Glycosyltransferase [C 31.1 61 0.0013 38.8 4.7 41 170-225 35-84 (495)
447 PRK13478 phosphonoacetaldehyde 30.9 46 0.001 36.5 3.6 42 928-972 160-203 (267)
448 PRK09449 dUMP phosphatase; Pro 30.9 57 0.0012 34.5 4.2 45 769-819 98-142 (224)
449 PLN02954 phosphoserine phospha 30.8 62 0.0014 34.2 4.5 38 769-810 87-124 (224)
450 TIGR01668 YqeG_hyp_ppase HAD s 30.7 43 0.00093 34.2 3.0 42 927-971 92-134 (170)
451 TIGR01993 Pyr-5-nucltdase pyri 29.6 47 0.001 34.0 3.2 26 752-777 3-28 (184)
452 PF01975 SurE: Survival protei 29.6 65 0.0014 33.9 4.2 39 170-226 1-39 (196)
453 PRK13015 3-dehydroquinate dehy 29.5 1.4E+02 0.0029 29.8 6.0 104 527-633 27-140 (146)
454 cd07944 DRE_TIM_HOA_like 4-hyd 29.4 7.9E+02 0.017 27.0 14.0 126 488-633 104-239 (266)
455 TIGR01681 HAD-SF-IIIC HAD-supe 29.4 52 0.0011 31.8 3.3 31 927-960 90-122 (128)
456 TIGR01545 YfhB_g-proteo haloac 28.9 87 0.0019 33.2 5.1 46 769-820 97-143 (210)
457 PF01075 Glyco_transf_9: Glyco 28.6 3.1E+02 0.0067 29.3 9.6 103 476-600 105-209 (247)
458 TIGR01544 HAD-SF-IE haloacid d 28.3 82 0.0018 35.0 4.9 40 767-810 122-161 (277)
459 COG0560 SerB Phosphoserine pho 28.3 60 0.0013 34.5 3.8 40 767-810 78-117 (212)
460 TIGR01990 bPGM beta-phosphoglu 28.3 72 0.0016 32.4 4.3 45 769-820 90-134 (185)
461 PHA02530 pseT polynucleotide k 26.8 62 0.0013 36.1 3.7 43 926-971 251-294 (300)
462 TIGR01685 MDP-1 magnesium-depe 26.4 1.9E+02 0.0042 29.7 6.9 29 940-971 127-155 (174)
463 TIGR01548 HAD-SF-IA-hyp1 haloa 26.3 43 0.00092 34.8 2.2 32 927-961 162-193 (197)
464 PF03358 FMN_red: NADPH-depend 26.1 1.4E+02 0.003 29.4 5.8 40 170-223 1-40 (152)
465 TIGR02254 YjjG/YfnB HAD superf 25.6 61 0.0013 34.1 3.3 42 928-972 154-197 (224)
466 PRK05282 (alpha)-aspartyl dipe 25.6 3.8E+02 0.0083 28.9 9.3 112 478-604 3-124 (233)
467 COG0241 HisB Histidinol phosph 25.6 1.7E+02 0.0038 30.3 6.3 74 896-972 75-149 (181)
468 TIGR02252 DREG-2 REG-2-like, H 25.6 89 0.0019 32.4 4.4 47 769-821 108-154 (203)
469 PLN02811 hydrolase 25.2 78 0.0017 33.5 4.0 42 928-972 139-183 (220)
470 TIGR01664 DNA-3'-Pase DNA 3'-p 24.9 1.5E+02 0.0033 30.0 5.9 38 929-969 111-158 (166)
471 COG0859 RfaF ADP-heptose:LPS h 24.7 2.3E+02 0.005 32.2 8.0 99 477-600 176-277 (334)
472 TIGR02201 heptsyl_trn_III lipo 24.2 2.5E+02 0.0054 31.9 8.2 45 547-600 242-286 (344)
473 PF14980 TIP39: TIP39 peptide 24.1 49 0.0011 25.9 1.5 15 4-18 36-50 (51)
474 PF00702 Hydrolase: haloacid d 24.0 59 0.0013 33.7 2.8 34 930-966 182-215 (215)
475 PHA02597 30.2 hypothetical pro 23.7 39 0.00085 35.0 1.3 14 747-762 2-15 (197)
476 COG1703 ArgK Putative periplas 23.3 5.8E+02 0.013 28.8 10.0 117 195-340 62-179 (323)
477 COG1618 Predicted nucleotide k 23.3 6.4E+02 0.014 25.9 9.5 27 195-223 16-43 (179)
478 PF09861 DUF2088: Domain of un 22.8 1.6E+02 0.0035 31.1 5.7 53 746-802 54-106 (204)
479 TIGR01088 aroQ 3-dehydroquinat 22.8 2.1E+02 0.0045 28.4 5.9 121 509-633 8-138 (141)
480 PRK13398 3-deoxy-7-phosphohept 22.7 1.1E+03 0.023 26.1 12.2 110 480-600 28-141 (266)
481 TIGR02254 YjjG/YfnB HAD superf 22.5 1.2E+02 0.0026 31.8 4.8 46 769-820 100-145 (224)
482 COG1099 Predicted metal-depend 22.3 2.5E+02 0.0054 30.1 6.7 82 479-566 96-177 (254)
483 PRK05446 imidazole glycerol-ph 21.6 1.9E+02 0.0041 33.4 6.4 46 924-972 102-147 (354)
484 COG0757 AroQ 3-dehydroquinate 21.6 3.6E+02 0.0079 26.6 7.1 70 527-598 26-97 (146)
485 COG2217 ZntA Cation transport 21.1 92 0.002 39.3 4.0 41 766-810 537-577 (713)
486 cd00466 DHQase_II Dehydroquina 21.1 2.1E+02 0.0046 28.3 5.6 105 526-633 24-138 (140)
487 PRK10037 cell division protein 20.7 1.1E+02 0.0023 33.3 4.0 27 194-222 10-38 (250)
488 PRK10916 ADP-heptose:LPS hepto 20.6 3.2E+02 0.007 31.1 8.2 44 548-600 244-287 (348)
489 COG3700 AphA Acid phosphatase 20.5 1.4E+02 0.003 30.6 4.3 32 770-805 118-149 (237)
No 1
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=3e-196 Score=1773.54 Aligned_cols=1003 Identities=62% Similarity=1.021 Sum_probs=896.2
Q ss_pred CCCCchhhhHHHHHHhcCCCCCccccCccccchhhhhhhhcCCCCCcchhhHHHHhccCCcchhhhhHHHHHHhcchhhh
Q 001705 1 MAGNEWINGYLEAILDAGSGKTKMNDGKFKLSKFEETKQKEGQLFSPTKYFVEEVINSFDESDLHRTWVKVIATRNTRER 80 (1024)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1024)
||||||||||||||||+|+|++ +++++. .+++||+|+||||||||||||||||||||||||+||+||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLD--DAKSSA-----LLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQER 73 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCcc--cccccc-----cccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhh
Confidence 9999999999999999999977 566652 267899999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHhhhhhhhchHHHHHHHHHHHHHHhcCccccccccc-cCcccccc--CCCC-Cccc--ccCcccccc
Q 001705 81 SNRLENMCWRIWHLARKKKQIAWEDAQRLAKRRLEREQGRNDAADDLSE-LSEGEKEK--GDSI-NASE--SLKEIPRIN 154 (1024)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~~~~--~~~~~~~~~ 154 (1024)
||||||||||||||||||||+|||+|||+|+||+|+|+||+++++|||| ||||||+| ++++ +.+. .+++||||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (1050)
T TIGR02468 74 NTRLENMCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRIS 153 (1050)
T ss_pred hhhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999 99999999 7887 4443 468999999
Q ss_pred c--ccccccccccCCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcc
Q 001705 155 S--DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS 232 (1024)
Q Consensus 155 ~--~~~~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~ 232 (1024)
| .|+.|++++ +.++|||+|||.||++||+||++||++|+|||..||++||++|+++||||+|+||||+..+|.++++
T Consensus 154 ~~~~~~~~~~~~-~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~ 232 (1050)
T TIGR02468 154 SNLEMETWSDQQ-KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWS 232 (1050)
T ss_pred ccchhhcchhhc-ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccc
Confidence 9 688999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCCCC------CCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcce
Q 001705 233 YGEPNEMLSCPSDG------TGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPY 306 (1024)
Q Consensus 233 y~~~~e~l~~~~~~------~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pD 306 (1024)
|++++|++.+.+++ ...+|++|+|+|+||.++|++|+.+|||+..|.+.++.++.++.+++.+++..+++.+||
T Consensus 233 y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 233 YGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cCCccccccccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 99999988653221 467899999999999977999999999999999999999999999999998877777899
Q ss_pred EEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc-chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHH
Q 001705 307 VIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK-DINASYKIMRRIEAEELGLDASEMVVTSTRQE 385 (1024)
Q Consensus 307 vIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~-~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~ 385 (1024)
|||+|||+.+++++++++.+++|+|+|+|++++.++.+++.+|.... .+...|++.+++..|+.++..||.||++|+++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 99999999999999999999999999999999999999999997554 67788999999999999999999999999999
Q ss_pred HHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcch
Q 001705 386 IEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW 465 (1024)
Q Consensus 386 ~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 465 (1024)
+++||.+|+.|.+.++|+|+++.++|+.|||++++++.|||||||++.|.|... +.+......-. ....+.|.++
T Consensus 393 ~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~-~~~~~~~~~~~----~~~~~~~~~~ 467 (1050)
T TIGR02468 393 IEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDG-DMDGETEGNEE----HPAKPDPPIW 467 (1050)
T ss_pred HHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCc-cccchhccccc----ccccccchhh
Confidence 999999999999999999999999999999999999999999999999998652 11111000000 1124467788
Q ss_pred HHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 466 SEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 466 ~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
..+++++..+++|+|+++||+++.||++.||+||..++.+.+.+++.+|+|++++.+++..+..++..++.++++++++.
T Consensus 468 ~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~ 547 (1050)
T TIGR02468 468 SEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLY 547 (1050)
T ss_pred HHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCC
Confidence 89999999999999999999999999999999999997555667888888999888888777788899999999999999
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAI 625 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l 625 (1024)
++|.|+|+++.++++++|+.|+.++|+||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++|
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaL 627 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAI 627 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHH
Confidence 99999999999999999999977778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccc----cCCCCCCCCCccccccccccc
Q 001705 626 ADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEI----MTIPGEPLSDSLRDVEDFSLR 701 (1024)
Q Consensus 626 a~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~d~s~~ 701 (1024)
|++|.++++++++++++++++++.+++|+|+.++++|++.+..+..++|+|+... .+++++++.+++++++||||+
T Consensus 628 A~AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 707 (1050)
T TIGR02468 628 ADALLKLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLN 707 (1050)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhh
Confidence 9999999999999999999999999889999999999999999999999988632 145567889999999999999
Q ss_pred cccccccccch-------hhhHHHHHHHHHHHH---hhhcc-cCC----CCCCCCCC--cccceeEEEEEecCCCCCCCc
Q 001705 702 FSMEGDFKLNA-------ELDAVTRQKNLIEAI---TQKAS-FNG----NASVTHSP--GRRQMLIVIAADCYDSDGNTT 764 (1024)
Q Consensus 702 ~s~~~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~-~~~----~~~~~~~~--~~~~rlllIa~DlDGTl~~~~ 764 (1024)
||+||++..++ +.++.++..++.+.+ +++.. +.+ +++.++|| ++++++++||+|+|.|++
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~--- 784 (1050)
T TIGR02468 708 LSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKD--- 784 (1050)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCCCC---
Confidence 99999955421 233334444444444 33331 111 26778887 889999999999999933
Q ss_pred hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC------CCccccCcch
Q 001705 765 ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP------WRDMVADGDY 838 (1024)
Q Consensus 765 ~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~------~~~~~~d~~~ 838 (1024)
..+.++++++++++....+.+.|+++|||++.++..++.+.++++.+||++||+.|++|||+ ++.+..|..|
T Consensus 785 --~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w 862 (1050)
T TIGR02468 785 --LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDY 862 (1050)
T ss_pred --hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHH
Confidence 44666777777764323356999999999999999999999997558999999999999997 2468899999
Q ss_pred hhhhcccCCchhHHHHHhhhhhccCCCC-----cccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEe
Q 001705 839 EAHVEYRWPGENVRSVVPRVARAEDGAE-----DDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYT 913 (1024)
Q Consensus 839 ~~~i~~~w~~~~v~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s 913 (1024)
..||.++|.++.+++++..+......++ .+.+++...+..||++|++.++...+.+++|++.|++++++|++++|
T Consensus 863 ~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys 942 (1050)
T TIGR02468 863 HSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYC 942 (1050)
T ss_pred HHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEee
Confidence 9999999999999999888877432111 16778888999999999987888888899999999999999999999
Q ss_pred cCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCC
Q 001705 914 RAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKRED 993 (1024)
Q Consensus 914 ~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~ 993 (1024)
+++++|||+|.++|||+||+||+.+|||++++|++|+||++||||++||.+.+++|+++|+++.+++++. +.++|+++|
T Consensus 943 ~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~-~~~sY~~eD 1021 (1050)
T TIGR02468 943 RNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLH-ANRSYPLDD 1021 (1050)
T ss_pred cCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhc-ccCCCcccc
Confidence 9866999999999999999999999999999999988999999999999999999999999988887765 999999999
Q ss_pred ccCCCCCCeeEeccccChhHHHHHHHhcc
Q 001705 994 VVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 994 v~~~~~~~~~~vt~~~~~dgI~~aL~~~~ 1022 (1024)
|||+|||||+++.++|..++|..||+++|
T Consensus 1022 Vvp~dspni~~~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1022 VVPLDSPNIVQATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred cccCCCCCeEeecCCCCHHHHHHHHHhcC
Confidence 99999999999988999999999999986
No 2
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.7e-58 Score=571.27 Aligned_cols=603 Identities=16% Similarity=0.207 Sum_probs=435.2
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+...+.++..+. ..+++|..+||.+|++.+ .....++.|++.+.++++++ |+||+|++++
T Consensus 70 ~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-----d~vwvhDYhl 144 (726)
T PRK14501 70 ELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIARPG-----DVVWVHDYQL 144 (726)
T ss_pred CceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEeCchh
Confidence 455666554331 246899999999986443 23344577888888888775 9999999999
Q ss_pred HHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHh
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~ 391 (1024)
.+++.+++++. ..++.|+.| .+++...+++.+++.+.+++ ++|+|.++|..++++
T Consensus 145 ~l~p~~lr~~~~~~~igfFlH------------------~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~--- 203 (726)
T PRK14501 145 MLLPAMLRERLPDARIGFFLH------------------IPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRH--- 203 (726)
T ss_pred hhHHHHHHhhCCCCcEEEEee------------------CCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHH---
Confidence 99999999775 689999999 55666677777777665555 999999999999887
Q ss_pred cccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhh
Q 001705 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRF 471 (1024)
Q Consensus 392 ~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 471 (1024)
|...+.++++.....+...++.+..++.++|+|||++.|.+... .+.......++
T Consensus 204 ----Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~---------------------~~~~~~~~~~l 258 (726)
T PRK14501 204 ----FLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQ---------------------DPEVQEEIRRL 258 (726)
T ss_pred ----HHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhc---------------------CchHHHHHHHH
Confidence 66677777765544333334444458999999999999976542 11111111111
Q ss_pred h-CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EEec----C-CCcccccccchHHHHHHHHHHH
Q 001705 472 F-TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-ILGN----R-DDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 472 ~-~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-IvG~----~-~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
. ..+++++|+++||+++.||+..+++||+.+. +.+|+ ++| ++|. + ++++++.....+..++|+...+
T Consensus 259 r~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll--~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~ 336 (726)
T PRK14501 259 RQDLRGRKIILSIDRLDYTKGIPRRLLAFERFL--EKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFG 336 (726)
T ss_pred HHHcCCCEEEEEecCcccccCHHHHHHHHHHHH--HhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence 1 1357789999999999999999999999984 44453 444 4442 2 3444555445555555565556
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhccCCcEE
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDILKALNNGL 615 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~eii~~~~~Gl 615 (1024)
..++.+.++|.|++++++++++|+.| |+||+||++||||++++||||| |+||+++..|++.+++ .|+
T Consensus 337 ~~~~~pv~~~~~~~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~l 408 (726)
T PRK14501 337 TVDWTPIHYFYRSLPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EAL 408 (726)
T ss_pred CCCcceEEEEeCCCCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCe
Confidence 66677778899999999999999999 9999999999999999999999 6688888899998884 499
Q ss_pred EeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCcccc
Q 001705 616 LVDPHDQNAIADALLKLLADK-NMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRD 694 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 694 (1024)
+|+|+|++++|++|.++++++ +++++...++++.+.+|||..|+++|++.|.++...+....... -.
T Consensus 409 lv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~--------~~---- 476 (726)
T PRK14501 409 LVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP--------IT---- 476 (726)
T ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc--------CC----
Confidence 999999999999999999975 45555566788888999999999999999998865432211100 00
Q ss_pred ccccccccccccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccceeEEEEEecCCCCCCC-----chhhHH
Q 001705 695 VEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNT-----TETFQA 769 (1024)
Q Consensus 695 ~~d~s~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlllIa~DlDGTl~~~-----~~~i~~ 769 (1024)
....+.++.++ ..+.+|+++ +|+||||.+. ...+++
T Consensus 477 ----------------------~~~~~~~~~~y---------------~~~~~rLi~--~D~DGTL~~~~~~~~~~~~~~ 517 (726)
T PRK14501 477 ----------------------PAAAEEIIARY---------------RAASRRLLL--LDYDGTLVPFAPDPELAVPDK 517 (726)
T ss_pred ----------------------ccCHHHHHHHH---------------HhccceEEE--EecCccccCCCCCcccCCCCH
Confidence 00112233444 234455444 9999997652 245789
Q ss_pred HHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhh--hcccCC
Q 001705 770 TIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAH--VEYRWP 847 (1024)
Q Consensus 770 ~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~--i~~~w~ 847 (1024)
.++++|++|.++ +|+.|+|+|||++..+.+++..+++ ++|++||++++.+++ .|... ....|.
T Consensus 518 ~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~------~w~~~~~~~~~w~ 582 (726)
T PRK14501 518 ELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGG------EWQLLEPVATEWK 582 (726)
T ss_pred HHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCC------ceEECCCcchhHH
Confidence 999999999986 6999999999999999999987544 699999999986532 23221 133453
Q ss_pred chhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCc---hhhHHHHHHHHHhc--CCeEEEEEecCCeEEEEe
Q 001705 848 GENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE---TRKVDNIRQRLRMR--GFRCNLVYTRAGSRLNVV 922 (1024)
Q Consensus 848 ~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~el~~~L~~~--~~~~~v~~s~~~~~lEI~ 922 (1024)
+.+..++..+....++ ... +....++++++.+.+. ....+++.+.+... ...+.++ +++ .++||+
T Consensus 583 -~~v~~il~~~~~~~~g---s~i----e~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~-~g~-~~veV~ 652 (726)
T PRK14501 583 -DAVRPILEEFVDRTPG---SFI----EEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVL-RGN-KVVEVR 652 (726)
T ss_pred -HHHHHHHHHHHhcCCC---cEE----EEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEE-ECC-eEEEEE
Confidence 6677777766654332 122 2233667777654321 12234566666542 2234333 344 499999
Q ss_pred cCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC---CceEEecCCCCCChHHHhcccccCCCCCccCCCC
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL---HKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDS 999 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a---g~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~ 999 (1024)
|+++|||.|++.|++ +++++.+++| ||+.| | ++||+.+ +++|+|| |+ +.+|+
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~-GD~~n-D-e~Mf~~~~~~~~~v~vG----~~----~s~A~------------ 707 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAI-GDDTT-D-EDMFRALPETAITVKVG----PG----ESRAR------------ 707 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEE-CCCCC-h-HHHHHhcccCceEEEEC----CC----CCcce------------
Confidence 999999999999999 7888889997 99999 9 9999986 7999999 65 34556
Q ss_pred CCeeEeccccChhHHHHHHHhc
Q 001705 1000 PNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 1000 ~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
|...++ ++++..|+.+
T Consensus 708 ----~~l~~~--~eV~~~L~~l 723 (726)
T PRK14501 708 ----YRLPSQ--REVRELLRRL 723 (726)
T ss_pred ----EeCCCH--HHHHHHHHHH
Confidence 565544 5688888765
No 3
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=4.3e-56 Score=535.53 Aligned_cols=459 Identities=28% Similarity=0.525 Sum_probs=357.0
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHH--------HcCCCce----EEEEEecCCCCCCCCccc
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARAL--------ANTEGVY----RVDLLTRQIASPEVDSSY 233 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aL--------a~~g~v~----~V~vlt~~~~~p~~~~~y 233 (1024)
.+|.|||+|||+||+++.+++ +|+ +|+||+..||.+||++| +++| | +|+|+||.+.+.. ...|
T Consensus 252 ~p~~~rIa~lS~Hg~~~~~~~-lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~ 326 (784)
T TIGR02470 252 IPMVFNVVILSPHGYFGQENV-LGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTC 326 (784)
T ss_pred CCccceEEEEecccccCCccc-cCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-cccc
Confidence 368899999999999888885 996 69999999999999985 6888 8 8889999986543 3345
Q ss_pred CCCccccCCCCCCCCCCCeEEEEecCCCCC-----CccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEE
Q 001705 234 GEPNEMLSCPSDGTGSCGAYIIRIPCGARD-----KYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVI 308 (1024)
Q Consensus 234 ~~~~e~l~~~~~~~~~~gv~i~rip~~~~~-----~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvI 308 (1024)
.++.+.+ ...+|++|+|+|++|.. +|++|+.+|||+..|.+.+...+.+- .+.+||+|
T Consensus 327 ~~~~e~~------~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~~pDlI 389 (784)
T TIGR02470 327 NQRLEKV------YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQGKPDLI 389 (784)
T ss_pred ccccccc------cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCCCEE
Confidence 5665554 44579999999999852 57999999999999999887766431 11479999
Q ss_pred EEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHH-
Q 001705 309 HGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIE- 387 (1024)
Q Consensus 309 h~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~- 387 (1024)
|+|||+.++++.++++.+++|+++|.|+++..++ ...|..+..+...|++..++..|..++..||.||++|.+++.
T Consensus 390 Hahy~d~glva~lla~~lgVP~v~t~HsL~~~K~---~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~ 466 (784)
T TIGR02470 390 IGNYSDGNLVASLLARKLGVTQCTIAHALEKTKY---PDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAG 466 (784)
T ss_pred EECCCchHHHHHHHHHhcCCCEEEECCcchhhcc---cccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhh
Confidence 9999999999999999999999999999977764 234544445667888888898899999999999999998866
Q ss_pred -----HHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCC-----ccccccccCccccc
Q 001705 388 -----MQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGD-----TDLKSLIGNDRTQS 457 (1024)
Q Consensus 388 -----~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~-----~~~~~~~~~~~~~~ 457 (1024)
.||+.|..|... .+ +++..|+ +.+.+|+.|||||+|.+.|.|....... ..+..++
T Consensus 467 ~~~~v~qY~s~~~ft~p--~L--y~vvnGi---d~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll------- 532 (784)
T TIGR02470 467 TKDSVGQYESHQAFTMP--GL--YRVVHGI---DVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELL------- 532 (784)
T ss_pred hhhhhhhhhhccccccc--ce--eeeecCc---cCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhc-------
Confidence 355555544421 00 0112232 2355699999999999999775520000 0000000
Q ss_pred cCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCC-cccccccchHHHHHHH
Q 001705 458 KRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDD-IEDMSNSSSVVLTTVL 536 (1024)
Q Consensus 458 ~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~-~~~l~~~~~~~~~~i~ 536 (1024)
..+........+...+++|+|+++||+++.||++.|++||.++..+++..+++ |+|++.+ ......+......++.
T Consensus 533 --~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LV-IVGGg~~~~~s~d~ee~~~i~~L~ 609 (784)
T TIGR02470 533 --FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLV-VVAGKLDAKESKDREEQAEIEKMH 609 (784)
T ss_pred --cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEE-EEeCCcccccccchhHHHHHHHHH
Confidence 01111112222333678999999999999999999999999876555555553 5555432 2222223335678899
Q ss_pred HHHHHcCCCCCEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEE
Q 001705 537 KLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL 615 (1024)
Q Consensus 537 ~~i~~~~l~~~V~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gl 615 (1024)
.+++++++.++|.|+|.. +..++.++|+.++.++|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|+
T Consensus 610 ~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGf 689 (784)
T TIGR02470 610 NLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGF 689 (784)
T ss_pred HHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEE
Confidence 999999999999999975 6778999998654455899999999999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 616 LVDPHDQNAIADALLKLL----ADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
+|+|.|+++++++|.+++ +||+.|+++++++++.+ ++|||+.++++++++.
T Consensus 690 LVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 690 HIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred EeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999876 69999999999999998 7999999999999886
No 4
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.2e-54 Score=522.70 Aligned_cols=462 Identities=28% Similarity=0.495 Sum_probs=349.0
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHH--------HHHHcCCCceEE----EEEecCCCCCCCCcccC
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELA--------RALANTEGVYRV----DLLTRQIASPEVDSSYG 234 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La--------~aLa~~g~v~~V----~vlt~~~~~p~~~~~y~ 234 (1024)
+|-|||++||.||++++.++ +|+ +|||||..||.+|| ++|+++| |+| +|+||.+.+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~~-lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheeccccccccccc-CCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 57799999999999999995 997 99999999999777 5666778 755 69999987655 45567
Q ss_pred CCccccCCCCCCCCCCCeEEEEecCCCCC----CccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEE
Q 001705 235 EPNEMLSCPSDGTGSCGAYIIRIPCGARD----KYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHG 310 (1024)
Q Consensus 235 ~~~e~l~~~~~~~~~~gv~i~rip~~~~~----~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~ 310 (1024)
++.+.+ ...++++|+|+|+||.+ .+++|+.+|||+..|.+.+..++.+- ...+||+||+
T Consensus 352 ~~~e~v------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~PDlIHa 414 (815)
T PLN00142 352 QRLEKV------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGKPDLIIG 414 (815)
T ss_pred Ccceec------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCCCCEEEE
Confidence 776655 44569999999999953 56799999999999999888776431 1147999999
Q ss_pred cCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHH---
Q 001705 311 HYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIE--- 387 (1024)
Q Consensus 311 h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~--- 387 (1024)
|||+.+++|..+++.+|+|+|+|.|+++..++. .+|.....+...|++..++..|..++..||.||++|.+++.
T Consensus 415 HYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~ 491 (815)
T PLN00142 415 NYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSK 491 (815)
T ss_pred CCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---ccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhccc
Confidence 999999999999999999999999999887763 34554446777888888999999999999999999999886
Q ss_pred ---HHHhcccCcch-HHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCc
Q 001705 388 ---MQWGLYDGFDL-KLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPP 463 (1024)
Q Consensus 388 ---~~~~~~~~f~~-~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 463 (1024)
.|+..|..|.. .+ +++-.|+. .+.+++.|||||+|...|.|.... ...+....+ ......-.+.
T Consensus 492 ~~i~qy~sh~~f~~p~L-----~rvv~GId---~~~~ki~VVppGvD~~~F~P~~~~--~~rl~~l~n--~I~~~l~~~~ 559 (815)
T PLN00142 492 DTVGQYESHTAFTLPGL-----YRVVHGID---VFDPKFNIVSPGADMSIYFPYTEK--QKRLTSLHP--SIEELLYSPE 559 (815)
T ss_pred chhhhhhcccccccchh-----hhhhcccc---ccccCeeEECCCCChhhcCCCChH--HhhHHhhcc--cchhhcCChH
Confidence 34444444432 22 23334442 345599999999999998765410 000000000 0000000111
Q ss_pred chHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecC-CCcccccccchHHHHHHHHHHHHc
Q 001705 464 MWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNR-DDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 464 ~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~-~~~~~l~~~~~~~~~~i~~~i~~~ 542 (1024)
.......+...+++|+|+++||+++.||++.|++|+.++..+.+..++ +|+|++ +.......+......++.++++++
T Consensus 560 ~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~L~~La~~l 638 (815)
T PLN00142 560 QNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKKMHSLIEKY 638 (815)
T ss_pred HHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHHHHHHHHHc
Confidence 111112222356788999999999999999999999988644433444 356665 211111112223457788999999
Q ss_pred CCCCCEEeCCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCC
Q 001705 543 DLYGQVAYPKHHK-QSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHD 621 (1024)
Q Consensus 543 ~l~~~V~~~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d 621 (1024)
++.++|.|+|... ..+..++|+..+.++|+||+||++||||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|
T Consensus 639 gL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D 718 (815)
T PLN00142 639 NLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYH 718 (815)
T ss_pred CCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCC
Confidence 9999999998654 334455555322223999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 622 QNAIADALLKL----LADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 622 ~~~la~aI~~l----l~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
+++++++|.++ ++|++.|++++++|++.+ ++|||+.++++++++.
T Consensus 719 ~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 719 GDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999998765 469999999999999998 7999999999999876
No 5
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.7e-54 Score=532.22 Aligned_cols=567 Identities=14% Similarity=0.139 Sum_probs=413.9
Q ss_pred CccccccCCcchHHH-----------------HHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC
Q 001705 264 KYIAKESLWPYIHEF-----------------VDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 264 ~~~~k~~lwp~~~~f-----------------~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
.+++|..|||.+|++ .......++.|++.+.+.+.+| |+||+|++++.+++.++++..
T Consensus 95 ~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-----d~vWvhDYhL~llp~~lR~~~ 169 (797)
T PLN03063 95 NGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-----DVVWCHDYHLMFLPQYLKEYN 169 (797)
T ss_pred HHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEecchhhhHHHHHHHhC
Confidence 468999999999986 1122233467888888888765 999999999999999999875
Q ss_pred -CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHhcccCcchHHHH
Q 001705 327 -NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 327 -~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r 402 (1024)
+++++|++| .+++.+.+++.+++.+.+++ +||+|.++|..++++ |...+.+
T Consensus 170 ~~~~igfFlH------------------iPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~-------Fl~~~~r 224 (797)
T PLN03063 170 NKMKVGWFLH------------------TPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARH-------FLSACTR 224 (797)
T ss_pred CCCcEEEEec------------------CCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHH-------HHHHHHH
Confidence 789999999 77888889998888776665 999999999999998 6666777
Q ss_pred HHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhh-CCCCCcEEE
Q 001705 403 KLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFF-TNPHKPTIL 481 (1024)
Q Consensus 403 ~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~Il 481 (1024)
+|+......-..++.+..++.+||+|||+..|.+... .+...+....+. ..+++++|+
T Consensus 225 ~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~---------------------~~~~~~~~~~lr~~~~~~~lIl 283 (797)
T PLN03063 225 ILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCE---------------------LPEVKQHMKELKRFFAGRKVIL 283 (797)
T ss_pred HhCccccCCceEECCeEEEEEEEecccCHHHHHHHhc---------------------ChhHHHHHHHHHHhcCCCeEEE
Confidence 7775544332333344458999999999998865431 111111111111 124688999
Q ss_pred EEeCCCCCCCHHHHHHHHhhccccCCCCc----EEEEE------ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 482 ALSRPDPKKNVTTLLKAFGECQPLRELAN----MTLIL------GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 482 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~LIv------G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
++||+++.||+..+++||+.+. ..+|+ ++|+. |+++.+++++....+..++|+..+...++.+.+++.
T Consensus 284 ~VgRLd~~KGi~~lL~Afe~lL--~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~ 361 (797)
T PLN03063 284 GVDRLDMIKGIPQKYLAFEKFL--EENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLD 361 (797)
T ss_pred EecccccccCHHHHHHHHHHHH--HhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEec
Confidence 9999999999999999999984 44453 44442 233444455444444444455555555677777788
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhccCCcEEEeCCCCHHHHHH
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP----VVATKNGGPVDILKALNNGLLVDPHDQNAIAD 627 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P----VVat~~Gg~~eii~~~~~Gllv~p~d~~~la~ 627 (1024)
++++.+++.++|+.| ||||+||++||||++++||||||+| +|+|..+|..+.+ +.+|++|+|+|++++|+
T Consensus 362 ~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~ 435 (797)
T PLN03063 362 CSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSS 435 (797)
T ss_pred CCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHH
Confidence 899999999999999 9999999999999999999999999 9999888888875 45799999999999999
Q ss_pred HHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCcccccccccccccccc
Q 001705 628 ALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEG 706 (1024)
Q Consensus 628 aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~~ 706 (1024)
||.++|+ ++++++++.+..++++..++|..|++.|++.+.++...+....... ..+
T Consensus 436 AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~------------------~~~----- 492 (797)
T PLN03063 436 AIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNI------------------PLE----- 492 (797)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCC------------------CCC-----
Confidence 9999999 5677778788888889999999999999999988765432111100 000
Q ss_pred ccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccceeEEEEEecCCCCCCC--------chhhHHHHHHHHHHH
Q 001705 707 DFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGNT--------TETFQATIKNVMKAA 778 (1024)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlllIa~DlDGTl~~~--------~~~i~~~~~~~l~~l 778 (1024)
...+.++.++ .++++++++ +|.||||... +..+++.+.++|++|
T Consensus 493 -----------l~~~~~~~~y---------------~~a~~rll~--LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L 544 (797)
T PLN03063 493 -----------LPEQDVIQQY---------------SKSNNRLLI--LGFYGTLTEPRNSQIKEMDLGLHPELKETLKAL 544 (797)
T ss_pred -----------CCHHHHHHHH---------------HhccCeEEE--EecCccccCCCCCccccccCCCCHHHHHHHHHH
Confidence 1122344444 234556665 8999996532 134678999999999
Q ss_pred hhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhh----hhcccCCchhHHHH
Q 001705 779 GLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEA----HVEYRWPGENVRSV 854 (1024)
Q Consensus 779 ~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~----~i~~~w~~~~v~~~ 854 (1024)
.++ ++..|+|+|||+...+..++...++ .++++||+++..++ ..|.. .....|. +.+..+
T Consensus 545 ~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~aeHG~~~r~~~------~~w~~~~~~~~~~~w~-~~v~~~ 608 (797)
T PLN03063 545 CSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLAAENGMFLRHTS------GEWVTTMPEHMNLDWV-DGVKNV 608 (797)
T ss_pred HcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEEEeCCEEEecCC------CceeeccccccChhHH-HHHHHH
Confidence 988 7899999999999999999987655 59999999987542 23421 1223454 556777
Q ss_pred HhhhhhccCCCCcccccccCCCCceEEEEEecCCCc---hhhHHHHHHHHHhc---CCeEEEEEecCCeEEEEecCCCCH
Q 001705 855 VPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE---TRKVDNIRQRLRMR---GFRCNLVYTRAGSRLNVVPSFASR 928 (1024)
Q Consensus 855 l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~el~~~L~~~---~~~~~v~~s~~~~~lEI~p~gasK 928 (1024)
++.+....++ ...+.+.+.+.++++..+. ...+.++.+.|... ...+.++ .+. ..+||.|.++||
T Consensus 609 l~~~~~rtpG-------s~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~-~Gk-~vvEvrp~gvnK 679 (797)
T PLN03063 609 FKYFTDRTPR-------SYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVV-RGQ-KSVEVHAIGVTK 679 (797)
T ss_pred HHHHHHhCCC-------cEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEE-ECC-eEEEEEcCCCCh
Confidence 7777776443 3344566788888865431 24566666666321 2234443 333 499999999999
Q ss_pred HHHHHHHHHHhCC-----CCCCEEEEeCCC-CCCChHHhhcCCCc
Q 001705 929 IQALRYLSIRWGI-----DLSKMVVFVGEK-GDTDYEDLLVGLHK 967 (1024)
Q Consensus 929 g~AL~~L~~~~gi-----~~~~vvafiGDs-~N~D~~~Ml~~ag~ 967 (1024)
|.|++.|+.++.. ..-+++.++||. ++ | |+||+..+-
T Consensus 680 G~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 680 GAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred HHHHHHHHHHhhhccccCCCCCEEEEeCCCCCC-c-HHHHHhccc
Confidence 9999999997621 123466667997 56 9 999997753
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.5e-52 Score=492.39 Aligned_cols=437 Identities=51% Similarity=0.879 Sum_probs=342.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
+||++||.||+++++++.+++.|+.||++.|+.+|+++|+++|.+|+|+|+|+....+.....|..+.+ +..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~--------~~~ 72 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE--------RIA 72 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee--------EeC
Confidence 589999999999999999999999999999999999999999943499999987543332223333332 224
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
+|+.++|+|+++. .+.++..+|+++..|...+...+.+ ...+|||||+|++..+.++.++++..++|
T Consensus 73 ~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~~DvIH~h~~~~~~~~~~~~~~~~~p 139 (439)
T TIGR02472 73 PGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQ------------QGHLPDLIHAHYADAGYVGARLSRLLGVP 139 (439)
T ss_pred CCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHH------------cCCCCCEEEEcchhHHHHHHHHHHHhCCC
Confidence 6999999998776 4555666777766555444443321 01369999999998889999999889999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+|+|.|+++......+...|.....+...|.+..++..|+.+++.+|.|+++|..++..++..+.++.+
T Consensus 140 ~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~----------- 208 (439)
T TIGR02472 140 LIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP----------- 208 (439)
T ss_pred EEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc-----------
Confidence 999999875543333332333222222334455556668889999999999998776654433322222
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.+||||||.+.|.|.... .........+.++...+++++|+++||+.+.
T Consensus 209 ----------~ki~vIpnGvd~~~f~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~ 260 (439)
T TIGR02472 209 ----------ERMQVIPPGVDLSRFYPPQSS------------------EETSEIDNLLAPFLKDPEKPPILAISRPDRR 260 (439)
T ss_pred ----------cceEEECCCcChhhcCCCCcc------------------ccchhHHHHHHhhccccCCcEEEEEcCCccc
Confidence 389999999999988765410 0011122233444455678899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 490 KNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
||++.+++||..+..+.+.+++.+|+|++++.+.+.....++..++..+++++++.++|.|+|+++.++++++|+.|+..
T Consensus 261 Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~~ 340 (439)
T TIGR02472 261 KNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARS 340 (439)
T ss_pred CCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 99999999998764344456776678888877666655556677888899999999999999999999999999988555
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
+|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++.++++++++++.
T Consensus 341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 420 (439)
T TIGR02472 341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEG 420 (439)
T ss_pred CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-hcCCHHHHHHHHHHHH
Q 001705 650 I-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 650 ~-~~fsw~~~a~~~l~~~ 666 (1024)
+ ++|||+.++++|++++
T Consensus 421 ~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 421 VRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHhCCHHHHHHHHHHHh
Confidence 8 7999999999999876
No 7
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.3e-53 Score=516.62 Aligned_cols=564 Identities=14% Similarity=0.170 Sum_probs=423.9
Q ss_pred CccccccCCcchHHHH-----------------HHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC
Q 001705 264 KYIAKESLWPYIHEFV-----------------DGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 264 ~~~~k~~lwp~~~~f~-----------------~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
.+++|..|||.+|++. ......++.|++.+.+.+.+| |+||+|++++.+++.++++..
T Consensus 179 ~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-----D~VWVHDYHL~LlP~~LR~~~ 253 (934)
T PLN03064 179 NGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-----DVVWCHDYHLMFLPKCLKEYN 253 (934)
T ss_pred HHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEecchhhHHHHHHHHhC
Confidence 4688999999999861 223334467888888888775 999999999999999999875
Q ss_pred -CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHhcccCcchHHHH
Q 001705 327 -NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 327 -~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r 402 (1024)
+.++.|++| .+++.+.+++.+++++.+++ +||+|.++|..++++ |...+.|
T Consensus 254 p~~~IGfFlH------------------iPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rh-------Fl~~c~r 308 (934)
T PLN03064 254 SNMKVGWFLH------------------TPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARH-------FVSACTR 308 (934)
T ss_pred CCCcEEEEec------------------CCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHH-------HHHHHHH
Confidence 689999999 77888899999998887777 999999999999998 7777888
Q ss_pred HHHHhhh-cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhC-CCCCcEE
Q 001705 403 KLRVRRQ-RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFT-NPHKPTI 480 (1024)
Q Consensus 403 ~l~~~~~-~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~I 480 (1024)
+|+.... .|+...|+. .++.++|.|||+..|..... .|.+...+..+.. ..++++|
T Consensus 309 lLg~~~~~~~v~~~Gr~-v~V~~~PiGID~~~f~~~~~---------------------~~~v~~~~~~lr~~~~g~kiI 366 (934)
T PLN03064 309 ILGLEGTPEGVEDQGRL-TRVAAFPIGIDSDRFIRALE---------------------TPQVQQHIKELKERFAGRKVM 366 (934)
T ss_pred HhCccccCCeEEECCEE-EEEEEEeCEEcHHHHHHHhc---------------------ChhHHHHHHHHHHHhCCceEE
Confidence 8876654 345555543 47999999999998865431 1222222221111 1468899
Q ss_pred EEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEEEE------ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 481 LALSRPDPKKNVTTLLKAFGECQPLRELAN----MTLIL------GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 481 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~LIv------G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
++++|+|+.|||...++||+.+. ..+|. ++||. +++++|+++..+..+.+++|+..+...++.+.+++
T Consensus 367 lgVDRLD~~KGI~~kL~AfE~fL--~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~ 444 (934)
T PLN03064 367 LGVDRLDMIKGIPQKILAFEKFL--EENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (934)
T ss_pred EEeeccccccCHHHHHHHHHHHH--HhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEe
Confidence 99999999999999999999984 44454 33331 55667888888888999999999999999999989
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDILKALNNGLLVDPHDQNAI 625 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l 625 (1024)
...++.+++.++|+.| ||||+||++|||||+++||||| |++|++...|+...+ +..|++|||+|++++
T Consensus 445 ~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L---~~~AllVNP~D~~~v 517 (934)
T PLN03064 445 DRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL---GAGAILVNPWNITEV 517 (934)
T ss_pred ccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh---CCceEEECCCCHHHH
Confidence 9999999999999999 9999999999999999999999 777775555555555 346999999999999
Q ss_pred HHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCcccccccccccccc
Q 001705 626 ADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSM 704 (1024)
Q Consensus 626 a~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~ 704 (1024)
|++|.++|+ ++++++++.+..++.+..+||..|++.|++.+..+...+....... ..
T Consensus 518 A~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~--------~~-------------- 575 (934)
T PLN03064 518 AASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQV--------PP-------------- 575 (934)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccccc--------CC--------------
Confidence 999999999 6777888888888889999999999999999987754321111100 00
Q ss_pred ccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccceeEEEEEecCCCCCC----Cc----------hhhHHH
Q 001705 705 EGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQMLIVIAADCYDSDGN----TT----------ETFQAT 770 (1024)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlllIa~DlDGTl~~----~~----------~~i~~~ 770 (1024)
....+.++.++ ..+.+++++ +|.||||.. |+ ..+++.
T Consensus 576 ------------~l~~~~~~~~y---------------~~a~~RLlf--LDyDGTLap~~~~P~~~~~~~~~~~a~p~p~ 626 (934)
T PLN03064 576 ------------QLPPEDAIQRY---------------LQSNNRLLI--LGFNATLTEPVDTPGRRGDQIKEMELRLHPE 626 (934)
T ss_pred ------------CCCHHHHHHHH---------------HhccceEEE--EecCceeccCCCCcccccccccccccCCCHH
Confidence 01123344445 234556666 899999543 22 236688
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhh----hhcccC
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEA----HVEYRW 846 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~----~i~~~w 846 (1024)
+.++|++|.++ ++..|+|+|||+...+..+|...++ .++++||+++..+. ..|.. .....|
T Consensus 627 l~~~L~~L~~d---p~n~VaIVSGR~~~~Le~~fg~~~L------~LaAEHG~~~R~~~------~~w~~~~~~~~~~~W 691 (934)
T PLN03064 627 LKEPLRALCSD---PKTTIVVLSGSDRSVLDENFGEFDM------WLAAENGMFLRHTK------GEWMTTMPEHLNMDW 691 (934)
T ss_pred HHHHHHHHHhC---CCCeEEEEeCCCHHHHHHHhCCCCc------eEEeeCCeEEecCC------CcceeccccccchHH
Confidence 99999999988 7899999999999999999988765 59999999987642 23421 122345
Q ss_pred CchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCC---chhhHHHHHHHHHh-c--CCeEEEEEecCCeEEE
Q 001705 847 PGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA---ETRKVDNIRQRLRM-R--GFRCNLVYTRAGSRLN 920 (1024)
Q Consensus 847 ~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~el~~~L~~-~--~~~~~v~~s~~~~~lE 920 (1024)
. +.+..++..+....++ ...+.+.+.+.|+++..+ ...++.++.++|.. . ...+.++ .+. ..+|
T Consensus 692 ~-~~v~~ile~~~eRtPG-------S~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~-~Gk-~VVE 761 (934)
T PLN03064 692 V-DSVKHVFEYFTERTPR-------SHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV-QGS-RSVE 761 (934)
T ss_pred H-HHHHHHHHHHHhcCCC-------cEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE-eCC-eEEE
Confidence 4 5577777777776544 333455677888876542 23346677777632 1 2334443 333 4999
Q ss_pred EecCCCCHHHHHHHHHHHhC----C-CCCCEEEEeCCCCCCChHHhhcCC
Q 001705 921 VVPSFASRIQALRYLSIRWG----I-DLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 921 I~p~gasKg~AL~~L~~~~g----i-~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
|.|.++|||.|++.|+.+.. . ..-++|.++||+..|| ++||+..
T Consensus 762 VrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~D-EdmF~~l 810 (934)
T PLN03064 762 VRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKD-EDIYTFF 810 (934)
T ss_pred EEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCc-HHHHHHH
Confidence 99999999999999999762 1 1235777789987559 9999964
No 8
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=6.1e-52 Score=511.51 Aligned_cols=593 Identities=15% Similarity=0.154 Sum_probs=425.8
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHHH---------------HHHHHHHHHHHHHhhhcCCCCCcceEEEE
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVDG---------------ALNHIVNMARAIGEQVNGGKPTWPYVIHG 310 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~~---------------~l~~~~~~~~~l~~~~~~g~~~~pDvIh~ 310 (1024)
....+.+...+. ..+++|..|||.+|++... ....++.|++++.+.+.++ -|+||+
T Consensus 132 ~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~----~d~VWV 207 (854)
T PLN02205 132 TFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPE----DDFVWI 207 (854)
T ss_pred CceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCC----CCEEEE
Confidence 345555544331 2578999999999887421 2223466888888877652 189999
Q ss_pred cCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHH
Q 001705 311 HYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEI 386 (1024)
Q Consensus 311 h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~ 386 (1024)
|++++.+++.+++++. ..++.|++| .+++...+++.+++++.+++ .||+|.++|.+++
T Consensus 208 hDYhL~llP~~LR~~~~~~~IgfFlH------------------iPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~ya 269 (854)
T PLN02205 208 HDYHLMVLPTFLRKRFNRVKLGFFLH------------------SPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYA 269 (854)
T ss_pred eCchhhHHHHHHHhhCCCCcEEEEec------------------CCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHH
Confidence 9999999999999875 689999999 67788889999998887776 9999999999999
Q ss_pred HHHHhcccCcchHHHHHHHHhhhc-----CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCC
Q 001705 387 EMQWGLYDGFDLKLERKLRVRRQR-----GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461 (1024)
Q Consensus 387 ~~~~~~~~~f~~~~~r~l~~~~~~-----g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1024)
++ |...+.|+|+..... |+...|+. .++.++|.|||+..|..... .
T Consensus 270 r~-------Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~-v~v~~~PigId~~~~~~~~~---------------------~ 320 (854)
T PLN02205 270 RH-------FLSCCSRMLGLSYESKRGYIGLEYYGRT-VSIKILPVGIHMGQLQSVLS---------------------L 320 (854)
T ss_pred HH-------HHHHHHHHhCCcccCCCcceeEEECCcE-EEEEEEeCeEcHHHHHHHhc---------------------C
Confidence 98 788888888876543 44444544 48999999999988754331 1
Q ss_pred Ccc---hHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEEE--E----ecCCCcccccccc
Q 001705 462 PPM---WSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTLI--L----GNRDDIEDMSNSS 528 (1024)
Q Consensus 462 p~~---~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~LI--v----G~~~~~~~l~~~~ 528 (1024)
|.. .++++..+..+++++|+.++|+|+.|||...++||+++. ..+|. ++|| + +.+++|++++.+.
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L--~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev 398 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLL--MQHPEWQGKVVLVQIANPARGKGKDVKEVQAET 398 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHH--HhCccccCCEEEEEEecCCCcccHHHHHHHHHH
Confidence 222 223333332346899999999999999999999999994 55563 3443 2 4567888899999
Q ss_pred hHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc----------------
Q 001705 529 SVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY---------------- 592 (1024)
Q Consensus 529 ~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~---------------- 592 (1024)
.+..++|++...+.++.+.+++...++.+++.++|+.| ||++++|++|||+|+++||.||
T Consensus 399 ~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 399 HSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc----cEEEeccccccccccchheeEEccCccccccccccccc
Confidence 99999999999999999988889999999999999999 9999999999999999999997
Q ss_pred ----CCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 593 ----GLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWS-ECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 593 ----G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~-~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
|+.||+..+|+..++ ..+++|||+|++++|+||.++|++|...+ ...+..++++..++...|++.|+..+.
T Consensus 475 ~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~ 550 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 550 (854)
T ss_pred cCCCCceEeeeccchhHHh----CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 567788888888877 35899999999999999999999765444 444455566689999999999999998
Q ss_pred HhhhcCCCCCccccCCCCCCCCCccccccccccccccccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCCCCcccc
Q 001705 668 HSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTHSPGRRQ 747 (1024)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1024)
+....+....... ..+.-..|. +.++.. -.+...+.++.++ .++.+
T Consensus 551 ~~~~~~~~~~~~~-----~g~g~~~~~-------~~~~~~-------~~~l~~~~i~~~y---------------~~~~~ 596 (854)
T PLN02205 551 RTCRDHSRRRCWG-----IGFGLSFRV-------VALDPN-------FRKLSMEHIVSAY---------------KRTTT 596 (854)
T ss_pred HHHHHHhhhhhcc-----ccccccccc-------cccccc-------ccccCHHHHHHHH---------------HhhcC
Confidence 7643321110000 000000000 000000 0012223344544 23444
Q ss_pred eeEEEEEecCCCCCCCc---hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC-CCCCCCCEEEecCCc
Q 001705 748 MLIVIAADCYDSDGNTT---ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT-VNIEDFDAIVCNSGS 823 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~~---~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~-i~~~~~d~lI~~nGa 823 (1024)
++++ +|+||||.... ..+++++.++|++|.++ +|+.|+|+|||++.++.++|.... + ++||+||+
T Consensus 597 rlI~--LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f~~~~~l------~laaEHG~ 665 (854)
T PLN02205 597 RAIL--LDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWFSPCEKL------GIAAEHGY 665 (854)
T ss_pred eEEE--EecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHhCCCCCe------EEEEeCCE
Confidence 5444 99999977542 36778999999999766 699999999999999999998742 3 69999999
Q ss_pred eEEcCCCccccCcchhh---hhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCc---hhhHHHH
Q 001705 824 ELYFPWRDMVADGDYEA---HVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE---TRKVDNI 897 (1024)
Q Consensus 824 ~I~~~~~~~~~d~~~~~---~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~el 897 (1024)
++..+. ...|.. .....|. +.++.++..+....++ ...+.+...+.+++++.+. ....+++
T Consensus 666 ~ir~~~-----~~~w~~~~~~~~~~w~-~~v~~i~~~y~ertpG-------s~IE~K~~slv~HyR~adpd~~~~qa~el 732 (854)
T PLN02205 666 FLRLKR-----DVEWETCVPVADCSWK-QIAEPVMQLYTETTDG-------STIEDKETALVWCYEDADPDFGSCQAKEL 732 (854)
T ss_pred EEEeCC-----CceeeecchhhhHHHH-HHHHHHHHHHhcCCCc-------hhheecceEEEEehhhCChHHhhhhhHHH
Confidence 998752 122321 1122343 3345555555444322 2333446778888764421 1123455
Q ss_pred HHHHHhcCC-eEEEEEecCCeEEEEecCCCCHHHHHHHHHH---HhCCCCCCEEEEeCCCCCCChHHhhcCCC
Q 001705 898 RQRLRMRGF-RCNLVYTRAGSRLNVVPSFASRIQALRYLSI---RWGIDLSKMVVFVGEKGDTDYEDLLVGLH 966 (1024)
Q Consensus 898 ~~~L~~~~~-~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~---~~gi~~~~vvafiGDs~N~D~~~Ml~~ag 966 (1024)
...+..... ....+.++.. ++||.|.++|||.|++.|++ .+|++++.+++| ||+.| | ++||+.++
T Consensus 733 ~~~l~~~l~~~~~~v~~G~~-vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~-GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 733 LDHLESVLANEPVTVKSGQN-IVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCI-GDDRS-D-EDMFEVIT 801 (854)
T ss_pred HHHHHHHHhcCceEEEECCc-EEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEE-cCCcc-H-HHHHHHhh
Confidence 555543211 1223445554 99999999999999999985 469999999997 99999 9 99999775
No 9
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.3e-40 Score=399.67 Aligned_cols=457 Identities=18% Similarity=0.189 Sum_probs=303.4
Q ss_pred cccccccCCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCC-c
Q 001705 159 IWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEP-N 237 (1024)
Q Consensus 159 ~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~-~ 237 (1024)
.|.... +.++|||+||+.+.. | -..+||.+-+|..|+++|++.| |+|.|+++.+..-......+.. .
T Consensus 472 ~~~~~~-~~~~mkILfVasE~a--------P-~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~ 539 (977)
T PLN02939 472 KLTLSG-TSSGLHIVHIAAEMA--------P-VAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVL 539 (977)
T ss_pred HhccCC-CCCCCEEEEEEcccc--------c-ccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhccccc
Confidence 455555 567899999999843 3 2579999999999999999999 9999999976422100000000 0
Q ss_pred cc-----cCCCC--C---CCCCCCeEEEEecC-CCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcce
Q 001705 238 EM-----LSCPS--D---GTGSCGAYIIRIPC-GARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPY 306 (1024)
Q Consensus 238 e~-----l~~~~--~---~~~~~gv~i~rip~-~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pD 306 (1024)
+. +.... . ....+|+.++.|.. .|. .|+....+..+-+.+..++ -|+++..+.+... ..+||
T Consensus 540 ~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~RF~-----~FsrAaLe~~~~~-~~~PD 612 (977)
T PLN02939 540 DVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFKRFS-----YFSRAALELLYQS-GKKPD 612 (977)
T ss_pred ceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHHHHHH-----HHHHHHHHHHHhc-CCCCC
Confidence 00 00000 0 02235777777753 121 2444444443323332221 1233333333221 25899
Q ss_pred EEEEcCCChHHHHHHHHc------cCCCCEEEEeCCCchhh---hHHHHhcCCCCcchh-h-HH--HHHHHHHHHHHhhh
Q 001705 307 VIHGHYADAGEVAAHLSG------ALNVPMVLTGHSLGRNK---FEQLLKQGRLPKDIN-A-SY--KIMRRIEAEELGLD 373 (1024)
Q Consensus 307 vIh~h~~~~~~~a~~l~~------~~~ipiV~t~H~l~~~~---~~~l~~~g~~~~~i~-~-~y--~~~r~i~~e~~~l~ 373 (1024)
|||+|+|++++++.++.. ..++|+|||+|++.... ...+...|.....+. + .+ ++..++..-+..+-
T Consensus 613 IIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv 692 (977)
T PLN02939 613 IIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIV 692 (977)
T ss_pred EEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHH
Confidence 999999999987544432 23689999999984211 011111121111000 0 00 00112222233455
Q ss_pred cCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCc
Q 001705 374 ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGND 453 (1024)
Q Consensus 374 ~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 453 (1024)
.||.|+|+|+.+.+++.. . +...++.. ++.+..++.+||||||++.|.|.. +..+...++++
T Consensus 693 ~AD~VtTVSptYA~EI~t-e--~G~GL~~~-----------L~~~~~Kl~gIlNGID~e~wnPat----D~~L~~~Ys~~ 754 (977)
T PLN02939 693 YSNIVTTVSPTYAQEVRS-E--GGRGLQDT-----------LKFHSKKFVGILNGIDTDTWNPST----DRFLKVQYNAN 754 (977)
T ss_pred hCCeeEeeeHHHHHHHHH-H--hccchHHH-----------hccccCCceEEecceehhhcCCcc----ccccccccChh
Confidence 799999999999998765 2 11122222 233445899999999999998865 22222222211
Q ss_pred cccccCCCCcchHHHhhhhCC---CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE-EEEecCCCcccccccch
Q 001705 454 RTQSKRNLPPMWSEVMRFFTN---PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT-LILGNRDDIEDMSNSSS 529 (1024)
Q Consensus 454 ~~~~~~~~p~~~~~~~~~~~~---~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~-LIvG~~~~~~~l~~~~~ 529 (1024)
.+..+... ......++..+ ++.|+|+++||+.+.||++.+++|+..+.. . ++. +|+|+|++ .
T Consensus 755 dl~GK~~n--K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~--dvqLVIvGdGp~--------~ 820 (977)
T PLN02939 755 DLQGKAAN--KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L--GGQFVLLGSSPV--------P 820 (977)
T ss_pred hhhhhhhh--hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c--CCEEEEEeCCCc--------H
Confidence 11111111 12234455544 357999999999999999999999988742 2 334 47788864 1
Q ss_pred HHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhc
Q 001705 530 VVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILK 609 (1024)
Q Consensus 530 ~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~ 609 (1024)
.+...+..++.+++..++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++||..|+|.
T Consensus 821 ~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~ 896 (977)
T PLN02939 821 HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVF 896 (977)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceee
Confidence 3456778889999998999999998766678999999 999999999999999999999999999999999999986
Q ss_pred c---------CCcEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 610 A---------LNNGLLVDPHDQNAIADALLKLLA----DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 610 ~---------~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+ +.+|++|+|.|+++++++|.+++. +++.|++++++++. +.|||+..+++|.++|.+++.+
T Consensus 897 d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 897 DFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred cCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHh
Confidence 5 478999999999999999999875 79999999887653 6899999999999999998754
No 10
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.6e-39 Score=379.80 Aligned_cols=402 Identities=25% Similarity=0.343 Sum_probs=290.9
Q ss_pred EEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCC
Q 001705 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCG 251 (1024)
Q Consensus 172 Il~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~g 251 (1024)
|++|+.|.. |...|-..+.||.+.++.+|+++|+++| |+|+|+|+....+. .+.. +..+|
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~------~~~~--------~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQ------PPVV--------EVAPG 60 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCC------CCcc--------ccCCC
Confidence 578888854 3322322246999999999999999999 99999998642111 0111 22359
Q ss_pred eEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEE
Q 001705 252 AYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMV 331 (1024)
Q Consensus 252 v~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV 331 (1024)
+++++++.++. ...... .+..........+.+ ..+.. ...+||+||+|++..+.++.++++.+++|+|
T Consensus 61 ~~v~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~---~~~~~-~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v 128 (405)
T TIGR03449 61 VRVRNVVAGPY-EGLDKE-------DLPTQLCAFTGGVLR---AEARH-EPGYYDLIHSHYWLSGQVGWLLRDRWGVPLV 128 (405)
T ss_pred cEEEEecCCCc-ccCCHH-------HHHHHHHHHHHHHHH---HHhhc-cCCCCCeEEechHHHHHHHHHHHHhcCCCEE
Confidence 99999986554 111111 111111111111111 11111 1147999999998888888888888899999
Q ss_pred EEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcC
Q 001705 332 LTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRG 411 (1024)
Q Consensus 332 ~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g 411 (1024)
+|.|+++..+...+.... ... ....+ ..|..+++.+|.|+++|+...+.+...+.
T Consensus 129 ~t~h~~~~~~~~~~~~~~----~~~--~~~~~--~~e~~~~~~~d~vi~~s~~~~~~~~~~~~----------------- 183 (405)
T TIGR03449 129 HTAHTLAAVKNAALADGD----TPE--PEARR--IGEQQLVDNADRLIANTDEEARDLVRHYD----------------- 183 (405)
T ss_pred EeccchHHHHHHhccCCC----CCc--hHHHH--HHHHHHHHhcCeEEECCHHHHHHHHHHcC-----------------
Confidence 999987432211110000 000 01111 12566789999999999987776544332
Q ss_pred ccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCC
Q 001705 412 VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKN 491 (1024)
Q Consensus 412 ~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kg 491 (1024)
....++.+||||+|.+.|.+... .....++...+++++|+++||+.+.||
T Consensus 184 -----~~~~ki~vi~ngvd~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 184 -----ADPDRIDVVAPGADLERFRPGDR-------------------------ATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred -----CChhhEEEECCCcCHHHcCCCcH-------------------------HHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 11238999999999987754321 011223334467889999999999999
Q ss_pred HHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCC
Q 001705 492 VTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK 570 (1024)
Q Consensus 492 i~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~ 570 (1024)
++.+++|+..+.+..+..++.+ ++|+..... .....++.++++.+++.++|.|+|+++.+++.++|+.|
T Consensus 234 ~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a---- 303 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA---- 303 (405)
T ss_pred HHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC----
Confidence 9999999999853222223665 667532100 02346788889999999999999999999999999999
Q ss_pred cEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001705 571 GVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 571 dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~ 650 (1024)
|++++||..|+||++++||||||+|||+++.||..|++.++.+|++++|+|+++++++|.+++++++.+++++.++++.+
T Consensus 304 d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 304 DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCHHHHHHHHHHHHHHhh
Q 001705 651 HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 651 ~~fsw~~~a~~~l~~~~~~~ 670 (1024)
++|||+.++++|+++|.+++
T Consensus 384 ~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 384 AGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HhCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999875
No 11
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=5.3e-40 Score=390.13 Aligned_cols=439 Identities=20% Similarity=0.219 Sum_probs=287.5
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCC-CC---
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCP-SD--- 245 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~-~~--- 245 (1024)
|||+|||++.. | ...+||++.+|..|+++|+++| |+|+|+|+....-. ...... ..+... ..
T Consensus 1 m~i~~vs~e~~--------P-~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~~~--~~~~~~-~~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA--------P-LIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPAIR--EKLRDA-QVVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc--------c-CcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcchh--hhhcCc-eEEEEeeeEEEE
Confidence 89999999954 3 2459999999999999999999 99999998753210 000000 000000 00
Q ss_pred --CCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHH
Q 001705 246 --GTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS 323 (1024)
Q Consensus 246 --~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~ 323 (1024)
....+|+++++++.. .++.+..+..+...+...+ .+.......+.. ...+|||||+|+|+++.++.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~-~f~~~~~~~~~~-----~~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFA-FFSWAAAEFAEG-----LDPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHH-HHHHHHHHHHHh-----cCCCCceEEECCcHHHHHHHHHH
Confidence 012368999988752 3444444544443322211 111111222211 12479999999999999999988
Q ss_pred ccC-----CCCEEEEeCCCchhh---hHHHHhcCCCCcch-hhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhccc
Q 001705 324 GAL-----NVPMVLTGHSLGRNK---FEQLLKQGRLPKDI-NASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYD 394 (1024)
Q Consensus 324 ~~~-----~ipiV~t~H~l~~~~---~~~l~~~g~~~~~i-~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~ 394 (1024)
+.+ ++|+|+|+|++.... .+.+...|...... ...+.....+...+..+..||.|+++|+.+.+++...+.
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~ 217 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEF 217 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccC
Confidence 653 799999999974311 11111111100000 000001111223455789999999999988887644221
Q ss_pred CcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCC
Q 001705 395 GFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTN 474 (1024)
Q Consensus 395 ~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 474 (1024)
++ .+...+ +.+..++.+||||||.+.|.|... ..+...+......... ........++...
T Consensus 218 ~~--gl~~~~-----------~~~~~ki~vI~NGid~~~~~p~~~----~~~~~~~~~~~~~~k~--~~k~~l~~~~gl~ 278 (466)
T PRK00654 218 GY--GLEGLL-----------RARSGKLSGILNGIDYDIWNPETD----PLLAANYSADDLEGKA--ENKRALQERFGLP 278 (466)
T ss_pred Cc--ChHHHH-----------HhcccCceEecCCCCccccCCccC----cccccccChhhhhchH--HHHHHHHHHhCCC
Confidence 11 111111 112348999999999999987541 1111111100000000 0011223344443
Q ss_pred -CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe-CC
Q 001705 475 -PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY-PK 552 (1024)
Q Consensus 475 -~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~-~g 552 (1024)
++.++|+++||+.+.||++.+++|+.++.+ +..++ +|+|+++. .+..++.+++.+++. ++.+ .|
T Consensus 279 ~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g 344 (466)
T PRK00654 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIG 344 (466)
T ss_pred CCCCcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEe
Confidence 367899999999999999999999999853 22333 36677642 245677778887763 4554 56
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC------CcEEEeCCCCHHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL------NNGLLVDPHDQNAIA 626 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~------~~Gllv~p~d~~~la 626 (1024)
+ +.+.+..+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|+|.++ .+|++|+|.|+++++
T Consensus 345 ~-~~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 345 Y-DEALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred C-CHHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 5 445567899999 99999999999999999999999999999999999999887 899999999999999
Q ss_pred HHHHHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 627 DALLKLLA---DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 627 ~aI~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++|.++++ +++.++++++++++ +.|||+..+++|+++|++++.
T Consensus 420 ~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 420 RALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 99999887 77778888887754 689999999999999998764
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=3.4e-38 Score=388.23 Aligned_cols=422 Identities=16% Similarity=0.124 Sum_probs=284.2
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCc-cccCCCC
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPN-EMLSCPS 244 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~-e~l~~~~ 244 (1024)
+..+|+|+|||.+.. | -..+||+..+|..|+++|++.| |+|+|+++............... ..+....
T Consensus 584 ~~~pM~Il~VSsE~~--------P-~aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~ 652 (1036)
T PLN02316 584 KEPPMHIVHIAVEMA--------P-IAKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGG 652 (1036)
T ss_pred CCCCcEEEEEEcccC--------C-CCCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCC
Confidence 455699999999953 2 1469999999999999999999 99999999864311000000000 0000000
Q ss_pred -----CCCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHH
Q 001705 245 -----DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVA 319 (1024)
Q Consensus 245 -----~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a 319 (1024)
.....+|+.++.+.... .++....+..+.+.+.. +. .|+++..+.+.. ...+|||||+|+|+.++++
T Consensus 653 ~~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~R-F~----~F~~Aale~l~~-~~~~PDIIHaHDW~talva 724 (1036)
T PLN02316 653 TEIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGER-FG----FFCHAALEFLLQ-SGFHPDIIHCHDWSSAPVA 724 (1036)
T ss_pred EEEEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHHH-HH----HHHHHHHHHHHh-cCCCCCEEEECCChHHHHH
Confidence 00223577887776421 12222223322222211 11 122222222221 1257999999999999999
Q ss_pred HHHHcc------CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcc
Q 001705 320 AHLSGA------LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLY 393 (1024)
Q Consensus 320 ~~l~~~------~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~ 393 (1024)
.+++.. .++|+|+|+|++.... .. .+..+..||.|+++|+.+.+++...+
T Consensus 725 ~llk~~~~~~~~~~~p~V~TiHnl~~~~------------------n~------lk~~l~~AD~ViTVS~tya~EI~~~~ 780 (1036)
T PLN02316 725 WLFKDHYAHYGLSKARVVFTIHNLEFGA------------------NH------IGKAMAYADKATTVSPTYSREVSGNS 780 (1036)
T ss_pred HHHHHhhhhhccCCCCEEEEeCCcccch------------------hH------HHHHHHHCCEEEeCCHHHHHHHHhcc
Confidence 988764 3589999999863210 01 12357899999999999888765421
Q ss_pred cCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhC
Q 001705 394 DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFT 473 (1024)
Q Consensus 394 ~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 473 (1024)
. +. .+..++.+||||||++.|.|... ..+...+.++.....+ .........++..
T Consensus 781 ~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD----~~lp~~y~~~~~~~gK-~~~k~~Lr~~lGL 835 (1036)
T PLN02316 781 A-IA-------------------PHLYKFHGILNGIDPDIWDPYND----NFIPVPYTSENVVEGK-RAAKEALQQRLGL 835 (1036)
T ss_pred C-cc-------------------cccCCEEEEECCccccccCCccc----ccccccCCchhhhhhh-hhhHHHHHHHhCC
Confidence 1 00 11238999999999999887641 1111000000000000 0001122344554
Q ss_pred C-CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCC--CCCEEe
Q 001705 474 N-PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL--YGQVAY 550 (1024)
Q Consensus 474 ~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l--~~~V~~ 550 (1024)
+ ++.|+|+++|||.+.||++.|++|+..+. .....+ +|+|+|++ ..+...+..++.++++ .++|.|
T Consensus 836 ~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll--~~~~ql-VIvG~Gpd--------~~~e~~l~~La~~Lg~~~~~rV~f 904 (1036)
T PLN02316 836 KQADLPLVGIITRLTHQKGIHLIKHAIWRTL--ERNGQV-VLLGSAPD--------PRIQNDFVNLANQLHSSHHDRARL 904 (1036)
T ss_pred CcccCeEEEEEeccccccCHHHHHHHHHHHh--hcCcEE-EEEeCCCC--------HHHHHHHHHHHHHhCccCCCeEEE
Confidence 4 36899999999999999999999999884 333333 46788864 2345677888888865 578988
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC-------------CcEEEe
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL-------------NNGLLV 617 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~-------------~~Gllv 617 (1024)
.+..+......+|+.| |+||+||++||||++.+|||+||+|+|++++||++|+|.++ .+|++|
T Consensus 905 ~g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf 980 (1036)
T PLN02316 905 CLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF 980 (1036)
T ss_pred EecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe
Confidence 8775333234799999 99999999999999999999999999999999999999874 589999
Q ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhh
Q 001705 618 DPHDQNAIADALLKLLAD-KNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+|.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|++++
T Consensus 981 ~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 981 DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999999999999999986 455566677777777 68999999999999998764
No 13
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=6.3e-38 Score=367.41 Aligned_cols=398 Identities=15% Similarity=0.122 Sum_probs=285.6
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCC--cccCCCccccCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVD--SSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~--~~y~~~~e~l~~~~~~~ 247 (1024)
|||++|+.+++ |+.||.+.++.+|+++|.++| |+|+|+|+....|... ..|..... ..+
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~~------~~~ 61 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWRY------RRE 61 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCcccccccc------eee
Confidence 89999997743 678999999999999999999 9999999874333321 11111000 002
Q ss_pred CCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--hHHHHHHHHcc
Q 001705 248 GSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD--AGEVAAHLSGA 325 (1024)
Q Consensus 248 ~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~--~~~~a~~l~~~ 325 (1024)
..+|++++|+|...... ...+..+.....+.+..... +...+. .+||+||+|.+. ....+.++++.
T Consensus 62 ~~~~i~v~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~Div~~~~p~~~~~~~~~~~~~~ 129 (412)
T PRK10307 62 SEGGVTVWRCPLYVPKQ----PSGLKRLLHLGSFALSSFFP----LLAQRR----WRPDRVIGVVPTLFCAPGARLLARL 129 (412)
T ss_pred ecCCeEEEEccccCCCC----ccHHHHHHHHHHHHHHHHHH----HhhccC----CCCCEEEEeCCcHHHHHHHHHHHHh
Confidence 34699999998532100 00001010111111111111 111111 369999999763 34556677888
Q ss_pred CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHH
Q 001705 326 LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405 (1024)
Q Consensus 326 ~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~ 405 (1024)
.++|+|+++|+.+++... ..|..... ...++... .|+.+++.||.|++.|+...+.+...
T Consensus 130 ~~~~~v~~~~d~~~~~~~---~~~~~~~~--~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------------- 189 (412)
T PRK10307 130 SGARTWLHIQDYEVDAAF---GLGLLKGG--KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK------------- 189 (412)
T ss_pred hCCCEEEEeccCCHHHHH---HhCCccCc--HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc-------------
Confidence 899999999987654322 22222111 11122222 37778999999999999877764332
Q ss_pred HhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeC
Q 001705 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSR 485 (1024)
Q Consensus 406 ~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgR 485 (1024)
|....++.+||||+|.+.|.+... +........+...+++++|+|+||
T Consensus 190 ----------~~~~~~i~vi~ngvd~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~i~~~G~ 237 (412)
T PRK10307 190 ----------GVAAEKVIFFPNWSEVARFQPVAD----------------------ADVDALRAQLGLPDGKKIVLYSGN 237 (412)
T ss_pred ----------CCCcccEEEECCCcCHhhcCCCCc----------------------cchHHHHHHcCCCCCCEEEEEcCc
Confidence 111238999999999988765431 000112223334566789999999
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
+.+.||++.+++|+..+. ..+++.| |+|+++. .+++.+++.++++. +|.|+|+++.++++++|+
T Consensus 238 l~~~kg~~~li~a~~~l~---~~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~ 302 (412)
T PRK10307 238 IGEKQGLELVIDAARRLR---DRPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPALLK 302 (412)
T ss_pred cccccCHHHHHHHHHHhc---cCCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHH
Confidence 999999999999999873 3456665 7888764 35567788888886 799999999999999999
Q ss_pred HhhcCCcEEEecCCCCC----CCHHHHHHHHcCCcEEEcCCCC--chhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHH
Q 001705 565 LAAKTKGVFINPALVEP----FGLTIIEAAAYGLPVVATKNGG--PVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Eg----fgl~llEAmA~G~PVVat~~Gg--~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.++++|+++
T Consensus 303 ~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~~~ 376 (412)
T PRK10307 303 MA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQALL 376 (412)
T ss_pred hc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 99 99999999998 5777899999999999999876 457876 689999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001705 639 WSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 639 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++++++++++.+ ++|||+.++++|++.|.+++.
T Consensus 377 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 377 RPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 999999999999 599999999999999998765
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.9e-38 Score=378.19 Aligned_cols=440 Identities=21% Similarity=0.232 Sum_probs=290.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcc-cCCC---ccc-cC---
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS-YGEP---NEM-LS--- 241 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~-y~~~---~e~-l~--- 241 (1024)
|||+|||++.. | ...+||++.+|..|+++|+++| |+|.|+++....-..... ..+. ..+ +.
T Consensus 1 m~i~~vs~E~~--------P-~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA--------P-FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc--------c-ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 89999999943 2 2469999999999999999999 999999987643111000 0000 000 00
Q ss_pred --CCCCCCCCCCeEEEEecCCCCCCcccc-ccCCc--chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChH
Q 001705 242 --CPSDGTGSCGAYIIRIPCGARDKYIAK-ESLWP--YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAG 316 (1024)
Q Consensus 242 --~~~~~~~~~gv~i~rip~~~~~~~~~k-~~lwp--~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~ 316 (1024)
........+|++++++.... ++.. ..+.. +...+.. ... |.++..+.+.. ...+|||||+|+|+++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r-~~~----f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAER-FAF----FSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHH-HHH----HHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 00000234688888887532 1111 11221 1122111 111 12222222211 1257999999999999
Q ss_pred HHHHHHHccCC---CCEEEEeCCCchhh---hHHHHhcCCCCcch-hhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHH
Q 001705 317 EVAAHLSGALN---VPMVLTGHSLGRNK---FEQLLKQGRLPKDI-NASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQ 389 (1024)
Q Consensus 317 ~~a~~l~~~~~---ipiV~t~H~l~~~~---~~~l~~~g~~~~~i-~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~ 389 (1024)
.++.+++...+ +|+|+|+|++.... ...+...|...... ...++...++.+.+.++..||.|+++|+.+.+++
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99999987776 99999999974311 11111111110000 0001111134445678899999999999988886
Q ss_pred HhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHh
Q 001705 390 WGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469 (1024)
Q Consensus 390 ~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 469 (1024)
.... +...++..+.. +..++.+||||||.+.|.|... ..+...+........ .........
T Consensus 221 ~~~~--~~~~l~~~l~~-----------~~~ki~~I~NGid~~~~~p~~~----~~~~~~~~~~~~~~k--~~~k~~l~~ 281 (473)
T TIGR02095 221 LTPE--FGYGLDGVLKA-----------RSGKLRGILNGIDTEVWNPATD----PYLKANYSADDLAGK--AENKEALQE 281 (473)
T ss_pred cCCc--CCccchhHHHh-----------cCCCeEEEeCCCCccccCCCCC----cccccCcCccchhhh--hhhHHHHHH
Confidence 4421 11111222211 2238999999999999987542 111111110000000 000112233
Q ss_pred hhhCCC--CCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCC
Q 001705 470 RFFTNP--HKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG 546 (1024)
Q Consensus 470 ~~~~~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~ 546 (1024)
++..+. +.++|+++||+.+.||++.+++|+.++.+ .. +.| |+|+++ +++..++.+++.+++ .
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~--~~lvi~G~g~---------~~~~~~l~~~~~~~~--~ 346 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE--LG--GQLVVLGTGD---------PELEEALRELAERYP--G 346 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH--cC--cEEEEECCCC---------HHHHHHHHHHHHHCC--C
Confidence 444433 78999999999999999999999999853 22 444 778764 123456667766654 5
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC------CcEEEeCCC
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL------NNGLLVDPH 620 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~------~~Gllv~p~ 620 (1024)
++.+.+.++.+++..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|+|.++ .+|++++|.
T Consensus 347 ~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 347 NVRVIIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred cEEEEEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 68887777788889999999 99999999999999999999999999999999999999988 899999999
Q ss_pred CHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 621 DQNAIADALLKLLA----DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 621 d~~~la~aI~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
|+++++++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 99999999999988 99999999988763 6899999999999999863
No 15
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=4.2e-38 Score=365.46 Aligned_cols=395 Identities=40% Similarity=0.632 Sum_probs=299.4
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||+|++.|+++-+. +.+++.||+++++.+|+++|+++| |+|+|+|.....+.. ... ...+
T Consensus 1 ~~~~~~~~~~~~~~----~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~------~~~--------~~~~ 60 (398)
T cd03800 1 RIALISLHGSPLAQ----PGGADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALP------PIV--------ELAP 60 (398)
T ss_pred CeEEEecccccccc----CCCCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccC------Ccc--------cccc
Confidence 58888888764332 224678999999999999999999 999999976432210 001 2335
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
++.+++++..+. .+.++..+++++..|...+...+.. . ..+||+||+|++..+.++..+++..++|+
T Consensus 61 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~Div~~~~~~~~~~~~~~~~~~~~~~ 127 (398)
T cd03800 61 GVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRR-------E-----GGRPDLIHAHYWDSGLVALLLARRLGIPL 127 (398)
T ss_pred ceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHh-------c-----CCCccEEEEecCccchHHHHHHhhcCCce
Confidence 899999987655 4455555666666555544333322 0 02799999999888888888888899999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
|++.|+++......... ...+....++..|..+++.||.|++.|....+.+...+..
T Consensus 128 i~~~h~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------------- 184 (398)
T cd03800 128 VHTFHSLGAVKRRHLGA--------ADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA--------------- 184 (398)
T ss_pred EEEeecccccCCccccc--------ccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc---------------
Confidence 99999875433211100 0001112223346778999999999999887776554321
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
...++.+||||+|.+.|.+... . ...+..+...+++++|+++||+.+.|
T Consensus 185 -------~~~~~~vi~ng~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~i~~~gr~~~~k 233 (398)
T cd03800 185 -------YPRRIRVVPPGVDLERFTPYGR----------------------A--EARRARLLRDPDKPRILAVGRLDPRK 233 (398)
T ss_pred -------cccccEEECCCCCccceecccc----------------------h--hhHHHhhccCCCCcEEEEEccccccc
Confidence 1126899999999988755431 0 00022223346788999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++|+..+.+ ..+++.+ ++|++.... .......+..+++.+++.++|.|+|+++.+++..+|+.|
T Consensus 234 ~~~~ll~a~~~l~~--~~~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a--- 303 (398)
T cd03800 234 GIDTLIRAYAELPE--LRERANLVIVGGPRDDI-----LAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA--- 303 (398)
T ss_pred CHHHHHHHHHHHHH--hCCCeEEEEEECCCCcc-----hhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC---
Confidence 99999999999863 2455555 667665321 122334577888889999999999999999999999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
|++++||..|+||++++||||||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.+++++.++++.
T Consensus 304 -di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 304 -DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred -CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-hcCCHHHHHHHHH
Q 001705 650 I-HRFSWPEHCRNYL 663 (1024)
Q Consensus 650 ~-~~fsw~~~a~~~l 663 (1024)
+ ++|||+.++++|+
T Consensus 383 ~~~~~s~~~~~~~~~ 397 (398)
T cd03800 383 ARARYTWERVAARLL 397 (398)
T ss_pred HHHhCCHHHHHHHHh
Confidence 9 7999999999886
No 16
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=3.8e-37 Score=365.18 Aligned_cols=445 Identities=21% Similarity=0.214 Sum_probs=285.1
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCC--
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSD-- 245 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~-- 245 (1024)
++||||||+.+.. | -..+||..-++..|.++|+++| |+|.|+++....-.-...-......+.....
T Consensus 2 ~~~~il~v~~E~~--------p-~~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~ 70 (485)
T PRK14099 2 TPLRVLSVASEIF--------P-LIKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGP 70 (485)
T ss_pred CCcEEEEEEeccc--------c-ccCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcchhhhhcCceEEEEEeeeCCce
Confidence 3599999998843 4 3689999999999999999999 9999999976431100000000000000000
Q ss_pred ----CCCCCCeEEEEecCCCCCCcccccc-CC------cchHHHHHHHHHHHHHHHHHHHhhhcCC-CCCcceEEEEcCC
Q 001705 246 ----GTGSCGAYIIRIPCGARDKYIAKES-LW------PYIHEFVDGALNHIVNMARAIGEQVNGG-KPTWPYVIHGHYA 313 (1024)
Q Consensus 246 ----~~~~~gv~i~rip~~~~~~~~~k~~-lw------p~~~~f~~~~l~~~~~~~~~l~~~~~~g-~~~~pDvIh~h~~ 313 (1024)
....+|+.++-+... .++.... +. +|.+.+...+ -|+++..++.... ..++|||||+|+|
T Consensus 71 ~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d~~~rf~-----~f~~a~~~~~~~~~~~~~pDIiH~Hdw 142 (485)
T PRK14099 71 ARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPDNAQRFA-----ALARAAAAIGQGLVPGFVPDIVHAHDW 142 (485)
T ss_pred EEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCcHHHHHH-----HHHHHHHHHHhhhccCCCCCEEEECCc
Confidence 011245655555321 2222221 11 2222222221 1233333333221 1268999999999
Q ss_pred ChHHHHHHHHc--cCCCCEEEEeCCCchhh-h--HHHHhcCCCCcchh-hHHHHHHHHHHHHHhhhcCCEEEeCCHHHHH
Q 001705 314 DAGEVAAHLSG--ALNVPMVLTGHSLGRNK-F--EQLLKQGRLPKDIN-ASYKIMRRIEAEELGLDASEMVVTSTRQEIE 387 (1024)
Q Consensus 314 ~~~~~a~~l~~--~~~ipiV~t~H~l~~~~-~--~~l~~~g~~~~~i~-~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~ 387 (1024)
++++++.+++. ..++|+|+|+|++.... + ..+...|....... ....+...+...+..+..||.|+|+|+.+.+
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHH
Confidence 99999987763 24689999999974211 1 11111111111000 0011111122345678999999999999888
Q ss_pred HHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHH
Q 001705 388 MQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSE 467 (1024)
Q Consensus 388 ~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 467 (1024)
++...+.++ .++.+|+. +..++.+||||||++.|.|... ..+...+..+.+..+. ......
T Consensus 223 ei~~~~~g~--gl~~~l~~-----------~~~ki~vI~NGID~~~f~p~~~----~~~~~~~~~~~~~~k~--~~k~~l 283 (485)
T PRK14099 223 EIQGPEAGM--GLDGLLRQ-----------RADRLSGILNGIDTAVWNPATD----ELIAATYDVETLAARA--ANKAAL 283 (485)
T ss_pred HHhcccCCc--ChHHHHHh-----------hCCCeEEEecCCchhhcccccc----chhhhcCChhHHHhHH--HhHHHH
Confidence 865433221 11112211 2248999999999999987652 1111111000000000 000112
Q ss_pred HhhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 468 VMRFFTN--PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 468 ~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
..++..+ ++.++|+++||+.+.||++.+++|+..+.+ ....+ +|+|+++. ++...+.+++.+++
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~l-vivG~G~~---------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQL-ALLGSGDA---------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEE-EEEecCCH---------HHHHHHHHHHHHCC--
Confidence 2334443 357899999999999999999999998842 22222 47787642 23456667776664
Q ss_pred CCE-EeCCCCCCCCHHHHHH-HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccC---------CcE
Q 001705 546 GQV-AYPKHHKQSDVPDIYR-LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL---------NNG 614 (1024)
Q Consensus 546 ~~V-~~~g~~~~~el~~ly~-~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~---------~~G 614 (1024)
+++ .|+|+ .++++.+|. .| |+||+||.+||||++.+||||||+|+|++++||+.|+|.++ .+|
T Consensus 350 ~~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 345 68898 788999875 57 99999999999999999999999988889999999998765 589
Q ss_pred EEeCCCCHHHHHHHHHH---HHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 615 LLVDPHDQNAIADALLK---LLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~---ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
++|+|.|+++++++|.+ +++|++.|++++++++. ++|||+..+++|+++|++++..
T Consensus 424 ~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHhh
Confidence 99999999999999997 67799999999999873 7899999999999999998754
No 17
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=2.5e-37 Score=367.07 Aligned_cols=433 Identities=17% Similarity=0.185 Sum_probs=286.9
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCC-cccCC-----Cccc-cCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVD-SSYGE-----PNEM-LSC 242 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~-~~y~~-----~~e~-l~~ 242 (1024)
|||+||+.+-. | -..|||..-.+..|.++|+++| |+|.|+++....-... ..... .... +..
T Consensus 6 ~~il~v~~E~~--------p-~~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (489)
T PRK14098 6 FKVLYVSGEVS--------P-FVRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKE 74 (489)
T ss_pred cEEEEEeecch--------h-hcccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeecC
Confidence 99999998843 3 2579999999999999999999 9999999976432100 00000 0000 000
Q ss_pred CCCC------C--CCCCeEEEEecCCCCCCccccccCC-------cchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceE
Q 001705 243 PSDG------T--GSCGAYIIRIPCGARDKYIAKESLW-------PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYV 307 (1024)
Q Consensus 243 ~~~~------~--~~~gv~i~rip~~~~~~~~~k~~lw-------p~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDv 307 (1024)
... . ...++.++-+... .++....+. +|.+.+...++ |+++..+.+.. ..++|||
T Consensus 75 -~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~-----f~~a~l~~~~~-~~~~pDi 144 (489)
T PRK14098 75 -KTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIF-----FNVGVLETLQR-LGWKPDI 144 (489)
T ss_pred -eeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHH-----HHHHHHHHHHh-cCCCCCE
Confidence 000 0 0113444444321 233333222 12222222211 12222222221 1257999
Q ss_pred EEEcCCChHHHHHHHHccC-------CCCEEEEeCCCchhhhHHHHhcCCCCcchh------hHHHHH----HHHHHHHH
Q 001705 308 IHGHYADAGEVAAHLSGAL-------NVPMVLTGHSLGRNKFEQLLKQGRLPKDIN------ASYKIM----RRIEAEEL 370 (1024)
Q Consensus 308 Ih~h~~~~~~~a~~l~~~~-------~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~------~~y~~~----r~i~~e~~ 370 (1024)
||+|+|++++++.+++... ++|+|+|+|++.. +|.+..... ..+... ..+...+.
T Consensus 145 iH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~--------qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~ 216 (489)
T PRK14098 145 IHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYR--------QGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYT 216 (489)
T ss_pred EEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcc--------cCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHH
Confidence 9999999999999987653 7999999998742 222211000 000000 11223456
Q ss_pred hhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccc
Q 001705 371 GLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLI 450 (1024)
Q Consensus 371 ~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~ 450 (1024)
.+..||.|+++|+.+.+++... ..+.-.++.+|+.+ ..++.+||||||++.|.|... ..+...+
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~-~~~~~gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d----~~~~~~~ 280 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGD-GEEAFGLDKVLEER-----------KMRLHGILNGIDTRQWNPSTD----KLIKKRY 280 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcC-CCCCcChHHHHHhc-----------CCCeeEEeCCccccccCCccc----ccccccC
Confidence 7889999999999999987441 01111233333322 238999999999999987652 2222222
Q ss_pred cCccccccCCCCcchHHHhhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCccccccc
Q 001705 451 GNDRTQSKRNLPPMWSEVMRFFT--NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNS 527 (1024)
Q Consensus 451 ~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~ 527 (1024)
+.+.+..+. ........++.. .++.++|+++||+.+.||++.+++|+.++.+ .++.| |+|+++.
T Consensus 281 ~~~~~~~k~--~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~----~~~~lvivG~G~~------- 347 (489)
T PRK14098 281 SIERLDGKL--ENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE----LDIQLVICGSGDK------- 347 (489)
T ss_pred CcchhhhHH--HHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh----cCcEEEEEeCCCH-------
Confidence 100000000 001112233333 2467899999999999999999999999853 24554 7787652
Q ss_pred chHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhh
Q 001705 528 SSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDI 607 (1024)
Q Consensus 528 ~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~ei 607 (1024)
.+...+.+++.+++ ++|.|.+.++.+++..+|+.| |+||+||.+||||++.+|||+||+|+|++++||..|+
T Consensus 348 --~~~~~l~~l~~~~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~ 419 (489)
T PRK14098 348 --EYEKRFQDFAEEHP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVET 419 (489)
T ss_pred --HHHHHHHHHHHHCC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCcee
Confidence 24567777777764 689999999888899999999 9999999999999999999999999999999999998
Q ss_pred hcc----CCcEEEeCCCCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001705 608 LKA----LNNGLLVDPHDQNAIADALLKLL---ADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 608 i~~----~~~Gllv~p~d~~~la~aI~~ll---~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+.+ +.+|+++++.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|++++
T Consensus 420 v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 420 IEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred eecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 864 67999999999999999999865 588888888776643 69999999999999999875
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=5.7e-37 Score=364.59 Aligned_cols=376 Identities=19% Similarity=0.209 Sum_probs=271.3
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCC
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~ 246 (1024)
.++|||++++.. .| ++..||.+.++.+|+++|.++| |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~~~---------~~-~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFVEP---------SP-FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEECC---------cC-CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc------------------
Confidence 456999999732 12 3568999999999999999999 99999998632111
Q ss_pred CCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-hHHHHHHHHcc
Q 001705 247 TGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD-AGEVAAHLSGA 325 (1024)
Q Consensus 247 ~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~-~~~~a~~l~~~ 325 (1024)
...|+.+++++..+. ..... ..+.+ .+.. .+.+.+.+ .+||+||+|... ..+.+..+++.
T Consensus 106 -~~~g~~v~~~~~~~~-~~~~~-~~~~~--~~~~-------~l~~~i~~-------~kpDiIh~~~~~~~~~~~~~~ak~ 166 (465)
T PLN02871 106 -EFHGAKVIGSWSFPC-PFYQK-VPLSL--ALSP-------RIISEVAR-------FKPDLIHASSPGIMVFGALFYAKL 166 (465)
T ss_pred -cccCceeeccCCcCC-ccCCC-ceeec--cCCH-------HHHHHHHh-------CCCCEEEECCCchhHHHHHHHHHH
Confidence 112556555442211 01111 00000 0000 11222222 479999999864 34445556777
Q ss_pred CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHH
Q 001705 326 LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405 (1024)
Q Consensus 326 ~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~ 405 (1024)
.++|+|++.|+........+ .+ ...++.+ ...++.+++.+|.|+++|+...+.+...+.
T Consensus 167 ~~ip~V~~~h~~~~~~~~~~----~~----~~~~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~----------- 225 (465)
T PLN02871 167 LCVPLVMSYHTHVPVYIPRY----TF----SWLVKPM--WDIIRFLHRAADLTLVTSPALGKELEAAGV----------- 225 (465)
T ss_pred hCCCEEEEEecCchhhhhcc----cc----hhhHHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHcCC-----------
Confidence 89999999997644322111 00 0011111 112455688999999999987776544321
Q ss_pred HhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhh-CCCCCcEEEEEe
Q 001705 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFF-TNPHKPTILALS 484 (1024)
Q Consensus 406 ~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~Il~vg 484 (1024)
....++.+||||+|.+.|.|... . .....++. ..+++++|+++|
T Consensus 226 -----------~~~~kv~vi~nGvd~~~f~p~~~---~---------------------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 226 -----------TAANRIRVWNKGVDSESFHPRFR---S---------------------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred -----------CCcCeEEEeCCccCccccCCccc---c---------------------HHHHHHhcCCCCCCeEEEEeC
Confidence 11238999999999998866431 0 00111111 135678999999
Q ss_pred CCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHH
Q 001705 485 RPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIY 563 (1024)
Q Consensus 485 Rld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly 563 (1024)
|+.+.||++.+++++..+ +++.| |+|+++. ..++.+++.. .+|.|+|+++.+++..+|
T Consensus 271 rl~~~K~~~~li~a~~~~------~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL------PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQAY 329 (465)
T ss_pred CCchhhhHHHHHHHHHhC------CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHHHH
Confidence 999999999999999876 34454 7887753 2344555543 369999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc---CCcEEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001705 564 RLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKA---LNNGLLVDPHDQNAIADALLKLLADKNMWS 640 (1024)
Q Consensus 564 ~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~---~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 640 (1024)
+.| |+||+||..|+||++++||||||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+++++++.++
T Consensus 330 ~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~ 405 (465)
T PLN02871 330 ASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRE 405 (465)
T ss_pred HHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Confidence 999 9999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHH-HHHHhhhc
Q 001705 641 ECRKNGLKNIHRFSWPEHCRNYLS-HVEHSRNR 672 (1024)
Q Consensus 641 ~~~~~~~~~~~~fsw~~~a~~~l~-~~~~~~~~ 672 (1024)
++++++++.+++|||+..++++++ .|.++...
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 68887765
No 19
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=6.8e-37 Score=357.01 Aligned_cols=367 Identities=20% Similarity=0.224 Sum_probs=270.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.... |..||.++++.+|+++|+++| |+|+|+|+....+. ..+ ....
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-------~~~--------~~~~ 52 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-------GIR--------YLTN 52 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-------Ccc--------cccC
Confidence 6899996532 678999999999999999999 99999998632110 011 2235
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh--HHHHHHHHccCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA--GEVAAHLSGALNV 328 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~--~~~a~~l~~~~~i 328 (1024)
|+.++++|..+. .+....+.+..+. ..+.+.+.+ .+|||||+|+... ...+.++++..++
T Consensus 53 ~i~v~~~p~~~~----~~~~~~~~~~~~~-------~~l~~~~~~-------~~~DiIh~~~~~~~~~~~~~~~~~~~~~ 114 (398)
T cd03796 53 GLKVYYLPFVVF----YNQSTLPTFFGTF-------PLLRNILIR-------ERITIVHGHQAFSALAHEALLHARTMGL 114 (398)
T ss_pred ceeEEEecceec----cCCccccchhhhH-------HHHHHHHHh-------cCCCEEEECCCCchHHHHHHHHhhhcCC
Confidence 889999885322 1111111111111 111122222 4799999998643 3345666778899
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|+|+|.|+++... .... ....+ ..+..++.+|.++++|+...+.+.... .+
T Consensus 115 ~~v~t~h~~~~~~------------~~~~--~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~------------ 165 (398)
T cd03796 115 KTVFTDHSLFGFA------------DASS--IHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-SL------------ 165 (398)
T ss_pred cEEEEeccccccc------------chhh--HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-CC------------
Confidence 9999999863210 0000 00111 234568899999999987665421111 11
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
...++.+||||+|.+.|.+... . ..+++++|+++||+.+
T Consensus 166 ---------~~~k~~vi~ngvd~~~f~~~~~----------------------~----------~~~~~~~i~~~grl~~ 204 (398)
T cd03796 166 ---------DPERVSVIPNAVDSSDFTPDPS----------------------K----------RDNDKITIVVISRLVY 204 (398)
T ss_pred ---------ChhhEEEEcCccCHHHcCCCcc----------------------c----------CCCCceEEEEEeccch
Confidence 1138999999999887765431 0 1256789999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
.||++.+++|+..+. +..+++.+ ++|+++. ...+.++++++++.++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~a- 270 (398)
T cd03796 205 RKGIDLLVGIIPEIC--KKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQG- 270 (398)
T ss_pred hcCHHHHHHHHHHHH--hhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhC-
Confidence 999999999999885 34567776 7787653 35577888999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++||||||+|||+|+.||..|++.++ .++++++ |.++++++|.+++.++.+...++.+++
T Consensus 271 ---d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~~~ 345 (398)
T cd03796 271 ---HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAEP-DVESIVRKLEEAISILRTGKHDPWSFH 345 (398)
T ss_pred ---CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecCC-CHHHHHHHHHHHHhChhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999764 4555544 899999999999998877777888888
Q ss_pred HHH-hcCCHHHHHHHHHHHHHHhhhc
Q 001705 648 KNI-HRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+.+ ++|||+..+++|+++|++++..
T Consensus 346 ~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 346 NRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 888 6999999999999999998753
No 20
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=8.8e-40 Score=371.15 Aligned_cols=474 Identities=33% Similarity=0.417 Sum_probs=341.4
Q ss_pred cccccc-cCcccccc--CCCC-CcccccCccccccc-----ccccccccccCCCceEEEEEecccccccCCCCCCCCCCC
Q 001705 124 ADDLSE-LSEGEKEK--GDSI-NASESLKEIPRINS-----DMQIWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDT 194 (1024)
Q Consensus 124 ~~~~~~-~~~~~~~~--~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~ 194 (1024)
+.|+++ +++++|.. +... ......+..|.+.. .+..|+.+.+.-.-+.+++. |++ ++| .+++
T Consensus 2 ~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d~ 72 (495)
T KOG0853|consen 2 TNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPDT 72 (495)
T ss_pred cchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCCC
Confidence 345555 88888876 2222 11112233333333 55678877621111333333 567 799 8999
Q ss_pred ChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcc
Q 001705 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPY 274 (1024)
Q Consensus 195 GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~ 274 (1024)
||++.|+++.+++|. .+.++++...|++..-+.....+..|..+...........+++++++|+++..++. +.+||+
T Consensus 73 G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~ 149 (495)
T KOG0853|consen 73 GGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPI 149 (495)
T ss_pred CceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhcee
Confidence 999999999999995 44444444444443222222222233332100011144569999999998876666 779999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcc
Q 001705 275 IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKD 354 (1024)
Q Consensus 275 ~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~ 354 (1024)
+..|++...-.. +++. . ||++|.+++.......+++++.|++.+++.|.++..+.++...+++ .
T Consensus 150 i~d~~~~~~~l~--------~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~---~ 213 (495)
T KOG0853|consen 150 IEDFVSACVPLL--------KQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGLAWK---I 213 (495)
T ss_pred ecchHHHHHHHH--------HHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhccce---E
Confidence 999985433322 2222 2 9999999999999999999999999999999999999887655544 6
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCc
Q 001705 355 INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYV 434 (1024)
Q Consensus 355 i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f 434 (1024)
+...|.+.+++..+...+..+| ++++.+++...|..++.|....+..+..|..+|+.+.+++++++..|++|.|.
T Consensus 214 ~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~--- 288 (495)
T KOG0853|consen 214 LVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQ--- 288 (495)
T ss_pred ecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCc---
Confidence 7788999999999999999999 88888899988888888877766666666556666555555555555555554
Q ss_pred cccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCC---CCcE
Q 001705 435 TTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRE---LANM 511 (1024)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~---~~~l 511 (1024)
+.+++||..+...-+ .+..
T Consensus 289 ----------------------------------------------------------~l~l~a~~~~~~~i~~~~~~~~ 310 (495)
T KOG0853|consen 289 ----------------------------------------------------------DLALPAFTLLHDSIPEPSISSE 310 (495)
T ss_pred ----------------------------------------------------------eeehhhHHhhhcccCCCCCCce
Confidence 444445554432221 1344
Q ss_pred EE-EEecCCCcccccccchHHHHHHHHHHHHcCCCC-CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHH
Q 001705 512 TL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG-QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589 (1024)
Q Consensus 512 ~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~-~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEA 589 (1024)
.+ ++|+. .+++..+++-+++.++..+++++++.+ .|.|+.++++.+. |+.++.++.+|+.|+. |.||+|.+||
T Consensus 311 hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~FGiv~IEA 385 (495)
T KOG0853|consen 311 HLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EHFGIVPIEA 385 (495)
T ss_pred EEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CCccceeHHH
Confidence 45 44432 267888899999999999999999964 4556688766655 7777777889999988 9999999999
Q ss_pred HHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHH---HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHH
Q 001705 590 AAYGLPVVATKNGGPVDILKALNNGLLVDPHDQN---AIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSH 665 (1024)
Q Consensus 590 mA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~---~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~ 665 (1024)
||||+|||||++||+.|+|.++.+|++++| +.+ .+|++|.++.+||++|.+|+++|++++ +.|+| +.|.+.
T Consensus 386 Ma~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~----~~~~~r 460 (495)
T KOG0853|consen 386 MACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSW----QHYSER 460 (495)
T ss_pred HhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhH----HHHHHH
Confidence 999999999999999999999999999999 666 699999999999999999999999999 57999 455556
Q ss_pred HHHhhhcCCCCCccccCCCCCCCCCccccccccccccccc
Q 001705 666 VEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSME 705 (1024)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~ 705 (1024)
+.+++.+.++|+. .+..+++++.+++|+++++.
T Consensus 461 i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 493 (495)
T KOG0853|consen 461 IASVLGKYLQWEK-------VSSLDSLEDRRYISLFYALS 493 (495)
T ss_pred HHHHhHhcCCccc-------ccccccccccccHHHHHHhh
Confidence 6666666777765 22378888999999776653
No 21
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=2.3e-36 Score=350.60 Aligned_cols=377 Identities=23% Similarity=0.278 Sum_probs=272.9
Q ss_pred eEEEEEecccccccCCCCCCCCCC-CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSD-TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTG 248 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~-~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~ 248 (1024)
|||++|+.. || |+ .||.+.++.+|+++|.+. ++|+|+|.... . ..
T Consensus 1 mkI~~i~~~---------~~--p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~------------------~~ 46 (388)
T TIGR02149 1 MKVTVLTRE---------YP--PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R------------------FD 46 (388)
T ss_pred CeeEEEecc---------cC--ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h------------------hc
Confidence 899999966 44 54 599999999999999886 67777765421 0 11
Q ss_pred CCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCC
Q 001705 249 SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNV 328 (1024)
Q Consensus 249 ~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~i 328 (1024)
.+|+.+++++.... .......+..+.. .+. . .. ...+||+||+|.+..+..+.++++..++
T Consensus 47 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~~----~-~~--~~~~~divh~~~~~~~~~~~~~~~~~~~ 107 (388)
T TIGR02149 47 SEGLTVKGYRPWSE-----LKEANKALGTFSV-------DLA----M-AN--DPVDADVVHSHTWYTFLAGHLAKKLYDK 107 (388)
T ss_pred CCCeEEEEecChhh-----ccchhhhhhhhhH-------HHH----H-hh--CCCCCCeEeecchhhhhHHHHHHHhcCC
Confidence 23778877763211 0001111111100 000 0 00 1136999999998777777777777799
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|+|++.|++.+...... . .....|.+...+ +...++.||.|++.|+...+.+...|+++..
T Consensus 108 p~v~~~h~~~~~~~~~~---~----~~~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~---------- 168 (388)
T TIGR02149 108 PLVVTAHSLEPLRPWKE---E----QLGGGYKLSSWA--EKTAIEAADRVIAVSGGMREDILKYYPDLDP---------- 168 (388)
T ss_pred CEEEEeecccccccccc---c----ccccchhHHHHH--HHHHHhhCCEEEEccHHHHHHHHHHcCCCCc----------
Confidence 99999998743211000 0 001112222222 5678899999999999877776554433222
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
.++.+||||+|...+.+... .....++...+++++|+++||+.+
T Consensus 169 -----------~~i~vi~ng~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~Grl~~ 212 (388)
T TIGR02149 169 -----------EKVHVIYNGIDTKEYKPDDG-------------------------NVVLDRYGIDRSRPYILFVGRITR 212 (388)
T ss_pred -----------ceEEEecCCCChhhcCCCch-------------------------HHHHHHhCCCCCceEEEEEccccc
Confidence 28999999999987754321 112233444567889999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCC-CCCEEe-CCCCCCCCHHHHHHHh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL-YGQVAY-PKHHKQSDVPDIYRLA 566 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l-~~~V~~-~g~~~~~el~~ly~~A 566 (1024)
.||++.+++|+.++. +...+ +++|++++. .++...+.+.+..++. .++|.| .+.++.+++..+|+.|
T Consensus 213 ~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 213 QKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred ccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 999999999999884 22333 355555432 2345667777777765 234665 5789999999999999
Q ss_pred hcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCH------HHHHHHHHHHHhCHHHHH
Q 001705 567 AKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQ------NAIADALLKLLADKNMWS 640 (1024)
Q Consensus 567 ~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~------~~la~aI~~ll~d~~~~~ 640 (1024)
|++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++.|. ++++++|.+++++++.++
T Consensus 282 ----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~ 357 (388)
T TIGR02149 282 ----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAK 357 (388)
T ss_pred ----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 641 ECRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 641 ~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
+++.++++.+ ++|||+.++++|.+.|+++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 9999999998 6999999999999999875
No 22
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=3.2e-37 Score=361.30 Aligned_cols=355 Identities=18% Similarity=0.190 Sum_probs=272.5
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+...+.++..+. ..+++|..+||.+|++.+ .....++.|++++.+.++++ |+||+|+++.
T Consensus 64 ~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~-----d~vwvhDYhl 138 (456)
T TIGR02400 64 KITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQPG-----DIVWVHDYHL 138 (456)
T ss_pred CceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCCCC-----CEEEEecchh
Confidence 445555554332 245799999999987532 33344577888888888765 9999999999
Q ss_pred HHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHh
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~ 391 (1024)
.+++.++++.. ..++.|+.| .+++...+++.+++.+.+++ .||+|+++|..++++
T Consensus 139 ~l~p~~lr~~~~~~~igfFlH------------------ipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~--- 197 (456)
T TIGR02400 139 MLLPAMLRELGVQNKIGFFLH------------------IPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARN--- 197 (456)
T ss_pred hHHHHHHHhhCCCCeEEEEEe------------------CCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHH---
Confidence 99999999875 679999999 66677778888887776666 999999999999998
Q ss_pred cccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcch---HHH
Q 001705 392 LYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW---SEV 468 (1024)
Q Consensus 392 ~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~ 468 (1024)
|...+.++++.....+-..++.+..++.+||||||++.|.+... .+... ..+
T Consensus 198 ----Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~---------------------~~~~~~~~~~l 252 (456)
T TIGR02400 198 ----FLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAK---------------------KPSVQKRIAEL 252 (456)
T ss_pred ----HHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhc---------------------ChhHHHHHHHH
Confidence 66777777776555433334445558999999999999976542 11111 112
Q ss_pred hhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EE-----ecCCCcccccccchHHHHHHHHH
Q 001705 469 MRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-IL-----GNRDDIEDMSNSSSVVLTTVLKL 538 (1024)
Q Consensus 469 ~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-Iv-----G~~~~~~~l~~~~~~~~~~i~~~ 538 (1024)
+..+ +++++|+++||+++.||++.+++||+.+. ..+|+ ++| ++ |+++.++++.....+..++|+..
T Consensus 253 r~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll--~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~ 328 (456)
T TIGR02400 253 RESL--KGRKLIIGVDRLDYSKGLPERLLAFERFL--EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGR 328 (456)
T ss_pred HHHc--CCCeEEEEccccccccCHHHHHHHHHHHH--HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhc
Confidence 2222 57889999999999999999999999984 34443 444 33 23344444443333444444444
Q ss_pred HHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhccCCcE
Q 001705 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP----VVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 539 i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P----VVat~~Gg~~eii~~~~~G 614 (1024)
.+..++.+.+.+.+.++.+++.++|+.| |+||+||.+||||++++||||||+| +|+|+.+|..+.+. +|
T Consensus 329 ~~~~~~~pv~~l~~~~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~g 401 (456)
T TIGR02400 329 FGTLDWTPIRYLNRSYDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GA 401 (456)
T ss_pred cCCCCCccEEEEcCCCCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---Cc
Confidence 4455666777788899999999999999 9999999999999999999999999 89988888777763 79
Q ss_pred EEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 615 LLVDPHDQNAIADALLKLLAD-KNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
++|+|+|++++|+||.+++++ +++++++.+.+++.+.+||+..|+++|++.+.
T Consensus 402 llVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 402 LLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 999999999999999999994 56778888888888888999999999998764
No 23
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=2.5e-35 Score=343.76 Aligned_cols=278 Identities=20% Similarity=0.267 Sum_probs=226.8
Q ss_pred CcceEEEEcCCChHHHHHHHHc--cCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEe
Q 001705 303 TWPYVIHGHYADAGEVAAHLSG--ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVT 380 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~--~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~ 380 (1024)
.+||+||+|++..+..+.++++ .++.|+++|.|+...... .....|. ...+..++.||.|++
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~-----------~~~~~~~-----~~~~~~~~~ad~vv~ 180 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR-----------EVLNHYT-----PEYQQLFRRGDLMLP 180 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc-----------hhhhhhh-----HHHHHHHHhCCEEEE
Confidence 4799999999988888887776 445678999997521100 0001111 113446789999999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
+|+...+.+... +. +..++.+||||+|.+.|.+... .
T Consensus 181 ~S~~~~~~l~~~--g~---------------------~~~ki~vi~nGvd~~~f~~~~~--------------------~ 217 (406)
T PRK15427 181 ISDLWAGRLQKM--GC---------------------PPEKIAVSRMGVDMTRFSPRPV--------------------K 217 (406)
T ss_pred CCHHHHHHHHHc--CC---------------------CHHHEEEcCCCCCHHHcCCCcc--------------------c
Confidence 999777765332 11 1238999999999988854331 0
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
...+...|+++||+.+.||++.+++|+..+. ...+++.+ |+|+|+. ..++.+++
T Consensus 218 ------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~--~~~~~~~l~ivG~G~~-----------~~~l~~~~ 272 (406)
T PRK15427 218 ------------APATPLEIISVARLTEKKGLHVAIEACRQLK--EQGVAFRYRILGIGPW-----------ERRLRTLI 272 (406)
T ss_pred ------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHH--hhCCCEEEEEEECchh-----------HHHHHHHH
Confidence 0123567999999999999999999999985 34566766 7888753 46678899
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCc
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALV------EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~------Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~ 613 (1024)
+++++.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||..|++.++.+
T Consensus 273 ~~~~l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~ 348 (406)
T PRK15427 273 EQYQLEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKS 348 (406)
T ss_pred HHcCCCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCc
Confidence 999999999999999999999999999 999999974 9999999999999999999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001705 614 GLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
|++++|+|+++++++|.++++ |+++++++++++++.+ ++|||+..++++.++|++
T Consensus 349 G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 349 GWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred eEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999999999999 9999999999999999 699999999999999875
No 24
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.1e-35 Score=338.54 Aligned_cols=365 Identities=23% Similarity=0.336 Sum_probs=264.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++ + |..||.++++.+|+++|.+.| |+|+|+|.... . ... ...
T Consensus 1 mki~~~~-~-------------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~--~------~~~---------~~~ 47 (371)
T cd04962 1 MKIGIVC-Y-------------PTYGGSGVVATELGKALARRG--HEVHFITSSRP--F------RLD---------EYS 47 (371)
T ss_pred CceeEEE-E-------------eCCCCccchHHHHHHHHHhcC--CceEEEecCCC--c------chh---------hhc
Confidence 7999998 2 457999999999999999999 99999987521 0 000 112
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHH----cc
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS----GA 325 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~----~~ 325 (1024)
+++.++.++.... +.. .++. +.......+.+.+.+ .+||+||+|++.....+..++ +.
T Consensus 48 ~~~~~~~~~~~~~----~~~-~~~~------~~~~~~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~~~~~~~ 109 (371)
T cd04962 48 PNIFFHEVEVPQY----PLF-QYPP------YDLALASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLAREILGK 109 (371)
T ss_pred cCeEEEEeccccc----chh-hcch------hHHHHHHHHHHHHhc-------CCccEEeecccCCccHHHHHHHHhcCc
Confidence 3555544432111 000 0110 011112222333322 579999999864332222222 22
Q ss_pred CCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHH
Q 001705 326 LNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLR 405 (1024)
Q Consensus 326 ~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~ 405 (1024)
.++|+|++.|+..... .+. ...+ +. .++..++.+|.|++.|+...+.+.+.+.
T Consensus 110 ~~~~~i~~~h~~~~~~------~~~-----~~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~----------- 162 (371)
T cd04962 110 KDLPVVTTLHGTDITL------VGQ-----DPSF---QP--ATRFSIEKSDGVTAVSESLRQETYELFD----------- 162 (371)
T ss_pred CCCcEEEEEcCCcccc------ccc-----cccc---hH--HHHHHHhhCCEEEEcCHHHHHHHHHhcC-----------
Confidence 3899999999752211 000 0011 11 1345688999999999987776544331
Q ss_pred HhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeC
Q 001705 406 VRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSR 485 (1024)
Q Consensus 406 ~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgR 485 (1024)
...++.+||||+|...|.+... .....++...+++++|+++||
T Consensus 163 ------------~~~~i~vi~n~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~il~~g~ 205 (371)
T cd04962 163 ------------ITKEIEVIPNFVDEDRFRPKPD-------------------------EALKRRLGAPEGEKVLIHISN 205 (371)
T ss_pred ------------CcCCEEEecCCcCHhhcCCCch-------------------------HHHHHhcCCCCCCeEEEEecc
Confidence 1127999999999876644321 011123334567889999999
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEE-EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMT-LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~-LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
+.+.||++.+++|+..+.+ . .+.. +++|.+++ ...+.+.+.++++.++|.|+|. .+++..+|+
T Consensus 206 l~~~K~~~~li~a~~~l~~--~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~ 269 (371)
T cd04962 206 FRPVKRIDDVIRIFAKVRK--E-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGK--QDHVEELLS 269 (371)
T ss_pred cccccCHHHHHHHHHHHHh--c-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecC--cccHHHHHH
Confidence 9999999999999998853 2 2333 47787764 2445677888898889999997 468999999
Q ss_pred HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001705 565 LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRK 644 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 644 (1024)
.| |++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++++++.+.++++
T Consensus 270 ~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 345 (371)
T cd04962 270 IA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSR 345 (371)
T ss_pred hc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 645 NGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 645 ~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
++++.+ ++|||+.++++|.+.|+++
T Consensus 346 ~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 346 AARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999996 7999999999999999753
No 25
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=2.8e-35 Score=351.53 Aligned_cols=434 Identities=21% Similarity=0.196 Sum_probs=281.3
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccC-----CC--
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLS-----CP-- 243 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~-----~~-- 243 (1024)
||+|||++.. | ...+||++.++..|+++|+++| |+|.|+++....-.... ........ ..
T Consensus 1 ~Il~v~~E~~--------p-~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~--~~~~~~~~~~~~~~~~~ 67 (476)
T cd03791 1 KVLFVASEVA--------P-FAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDEL--RGQLLVLRLFGVPVGGR 67 (476)
T ss_pred CEEEEEcccc--------c-cccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHh--ccCeEEEEEEeeccCCc
Confidence 6999998833 2 3479999999999999999999 99999998754311100 00000000 00
Q ss_pred -----CCCCCCCCeEEEEecCCCCCCcccccc-----CCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC
Q 001705 244 -----SDGTGSCGAYIIRIPCGARDKYIAKES-----LWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA 313 (1024)
Q Consensus 244 -----~~~~~~~gv~i~rip~~~~~~~~~k~~-----lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~ 313 (1024)
......+|+.+++++.... ..... ..++...+... ..+.......+.+. ..+|||||+|+|
T Consensus 68 ~~~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~f~~~~~~~l~~~-----~~~pDviH~hd~ 138 (476)
T cd03791 68 PEYVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNAERF-ALFSRAALELLRRL-----GWKPDIIHCHDW 138 (476)
T ss_pred eeEEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHHHHH-HHHHHHHHHHHHhc-----CCCCcEEEECch
Confidence 0002336888888875321 11111 11221111111 11111222222221 257999999999
Q ss_pred ChHHHHHHHHccC------CCCEEEEeCCCchhh---hHHHHhcCCCC--cchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 314 DAGEVAAHLSGAL------NVPMVLTGHSLGRNK---FEQLLKQGRLP--KDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 314 ~~~~~a~~l~~~~------~ipiV~t~H~l~~~~---~~~l~~~g~~~--~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
+++.++.+++... ++|+|+|+|++.... ...+...+... ......+.....+..++..+..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9999988888763 899999999974321 11111111110 000000011122334667889999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+.+.+++...+.++ .++..+. .+..++.+||||+|.+.|.|... ..+...+..+.. ....
T Consensus 219 ~~~~~~i~~~~~~~--gl~~~~~-----------~~~~ki~~I~NGid~~~~~p~~~----~~~~~~~~~~~~---~~~~ 278 (476)
T cd03791 219 PTYAREILTPEFGE--GLDGLLR-----------ARAGKLSGILNGIDYDVWNPATD----PHLPANYSADDL---EGKA 278 (476)
T ss_pred HhHHHHhCCCCCCc--chHHHHH-----------hccCCeEEEeCCCcCcccCcccc----chhhhcCCcccc---ccHH
Confidence 98888764322111 1111111 12248999999999999987642 111100000000 0000
Q ss_pred c-chHHHhhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHH
Q 001705 463 P-MWSEVMRFFT--NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKL 538 (1024)
Q Consensus 463 ~-~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~ 538 (1024)
. ......++.. .++.++|+++||+.+.||++.+++|+..+.+ .. +.+ ++|.++. .+...+.++
T Consensus 279 ~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~--~~lvi~G~g~~---------~~~~~~~~~ 345 (476)
T cd03791 279 ENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE--LG--GQLVILGSGDP---------EYEEALREL 345 (476)
T ss_pred HHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH--cC--cEEEEEecCCH---------HHHHHHHHH
Confidence 0 1112233333 3688999999999999999999999999853 22 444 6777642 234556666
Q ss_pred HHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCC------
Q 001705 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALN------ 612 (1024)
Q Consensus 539 i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~------ 612 (1024)
+.++ .+++.+.+..+.+++..+|+.| |++|+||.+||||++++|||+||+|||+++.||..|++.++.
T Consensus 346 ~~~~--~~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~ 419 (476)
T cd03791 346 AARY--PGRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEG 419 (476)
T ss_pred HHhC--CCcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCC
Confidence 6665 4577776666667778999999 999999999999999999999999999999999999999887
Q ss_pred cEEEeCCCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 613 NGLLVDPHDQNAIADALLKLLA---DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll~---d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
+|++++|.|+++++++|.++++ +++.++++++++++ ..|||+..+++|++.|+
T Consensus 420 ~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 420 TGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHh
Confidence 9999999999999999999886 67888888777654 57999999999999986
No 26
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=6.1e-35 Score=340.37 Aligned_cols=387 Identities=19% Similarity=0.199 Sum_probs=264.8
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
|||||+.+ || |+ ..+||++|+++| |+|+++|.... ... . .
T Consensus 1 ~il~~~~~---------~p------~~---~~~la~~L~~~G--~~v~~~~~~~~----------~~~--------~--~ 40 (396)
T cd03818 1 RILFVHQN---------FP------GQ---FRHLAPALAAQG--HEVVFLTEPNA----------APP--------P--G 40 (396)
T ss_pred CEEEECCC---------Cc------hh---HHHHHHHHHHCC--CEEEEEecCCC----------CCC--------C--C
Confidence 58999876 55 33 357999999999 99999998732 000 0 1
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHcc-CCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGA-LNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~-~~ip 329 (1024)
|+++++++.++.. ....++|...|...+.... .+.+.+..+... +++||+||+|.... .+..++.. .++|
T Consensus 41 ~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~pdvi~~h~~~~--~~~~l~~~~~~~~ 111 (396)
T cd03818 41 GVRVVRYRPPRGP----TSGTHPYLREFEEAVLRGQ-AVARALLALRAK--GFRPDVIVAHPGWG--ETLFLKDVWPDAP 111 (396)
T ss_pred CeeEEEecCCCCC----CCCCCccchhHHHHHHHHH-HHHHHHHHHHhc--CCCCCEEEECCccc--hhhhHHHhCCCCC
Confidence 6899999865542 1147778888776554433 223333333222 36899999996422 22334444 3689
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhH---HHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHH
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINAS---YKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~---y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~ 406 (1024)
+|.+.|-+....... .+......... .++..+.......++.||.||+.|+...+.+...+.
T Consensus 112 ~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~------------ 176 (396)
T cd03818 112 LIGYFEFYYRAEGAD---VGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR------------ 176 (396)
T ss_pred EEEEEeeeecCCCCC---CCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc------------
Confidence 998776432221000 00000011111 111111111346789999999999877665322211
Q ss_pred hhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeC-
Q 001705 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSR- 485 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgR- 485 (1024)
.++.|||||+|.+.|.+.... ... . .......+++++|+++||
T Consensus 177 -------------~ki~vI~ngvd~~~f~~~~~~--~~~---------------~------~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 177 -------------SRISVIHDGIDTDRLRPDPQA--RLR---------------L------PNGRVLTPGDEVITFVARN 220 (396)
T ss_pred -------------cceEEeCCCccccccCCCchh--hhc---------------c------cccccCCCCCeEEEEECCC
Confidence 289999999999988765410 000 0 000112356789999998
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCC-CcccccccchHHHHHHHHHHH-HcCCCCCEEeCCCCCCCCHHHH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRD-DIEDMSNSSSVVLTTVLKLID-KYDLYGQVAYPKHHKQSDVPDI 562 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~-~~~~l~~~~~~~~~~i~~~i~-~~~l~~~V~~~g~~~~~el~~l 562 (1024)
+.+.||++.+++|+..+.+ ..+++.+ |+|++. .+.........+..++.+... +++ .++|.|+|+++.+++..+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~--~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~ 297 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLR--ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLAL 297 (396)
T ss_pred cccccCHHHHHHHHHHHHH--HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHH
Confidence 9999999999999998853 4566665 666532 111111111112333322222 222 468999999999999999
Q ss_pred HHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001705 563 YRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 563 y~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|++++|.|+++++++|.+++++++.++++
T Consensus 298 l~~a----dv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l 373 (396)
T cd03818 298 LQVS----DVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARL 373 (396)
T ss_pred HHhC----cEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCHHHHHHHHHH
Q 001705 643 RKNGLKNI-HRFSWPEHCRNYLS 664 (1024)
Q Consensus 643 ~~~~~~~~-~~fsw~~~a~~~l~ 664 (1024)
++++++.+ ++|||+.++++|++
T Consensus 374 ~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 374 RRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999 57999999998863
No 27
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=5e-34 Score=329.79 Aligned_cols=367 Identities=20% Similarity=0.221 Sum_probs=264.6
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
-||++|..+ -..||+++++.+|+++|.+.| |++.|++....++ +... ...
T Consensus 2 ~~il~ii~~-------------~~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~~-----~~~~----------~~~ 51 (374)
T TIGR03088 2 PLIVHVVYR-------------FDVGGLENGLVNLINHLPADR--YRHAVVALTEVSA-----FRKR----------IQR 51 (374)
T ss_pred ceEEEEeCC-------------CCCCcHHHHHHHHHhhccccc--cceEEEEcCCCCh-----hHHH----------HHh
Confidence 378888865 236999999999999999998 9998887532111 0111 112
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
.|+.+++++..+.. .+. + ...+.+.+.+ .+|||||+|.... ..+.+++...++|
T Consensus 52 ~~i~~~~~~~~~~~-------~~~----~-------~~~l~~~l~~-------~~~Divh~~~~~~-~~~~~~~~~~~~~ 105 (374)
T TIGR03088 52 PDVAFYALHKQPGK-------DVA----V-------YPQLYRLLRQ-------LRPDIVHTRNLAA-LEAQLPAALAGVP 105 (374)
T ss_pred cCceEEEeCCCCCC-------ChH----H-------HHHHHHHHHH-------hCCCEEEEcchhH-HHHHHHHHhcCCC
Confidence 37888887642210 111 1 1122222222 4799999997633 3344445555777
Q ss_pred E-EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 330 M-VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 330 i-V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
. +++.|+....... .....|... ++.....+|.++++|+...+.+...+.
T Consensus 106 ~~i~~~h~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~~-------------- 156 (374)
T TIGR03088 106 ARIHGEHGRDVFDLD----------GSNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPVK-------------- 156 (374)
T ss_pred eEEEeecCcccccch----------hhHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhcC--------------
Confidence 5 5566643111000 001112222 233456789999999887776433321
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
.+..++.+||||+|.+.|.+... . . ...........++++|+++||+.+
T Consensus 157 --------~~~~~~~vi~ngvd~~~~~~~~~-~--------------------~--~~~~~~~~~~~~~~~i~~vGrl~~ 205 (374)
T TIGR03088 157 --------VPPAKIHQIYNGVDTERFHPSRG-D--------------------R--SPILPPDFFADESVVVGTVGRLQA 205 (374)
T ss_pred --------CChhhEEEeccCccccccCCCcc-c--------------------h--hhhhHhhcCCCCCeEEEEEecCCc
Confidence 12238999999999988865431 0 0 001111222356789999999999
Q ss_pred CCCHHHHHHHHhhccccCC--CCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHH
Q 001705 489 KKNVTTLLKAFGECQPLRE--LANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 565 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~--~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~ 565 (1024)
.||++.+++|+.++.+... .+++.| ++|+++. ...+.+.++.+++...+.|+|+ .+|+..+|+.
T Consensus 206 ~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ 272 (374)
T TIGR03088 206 VKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALMQA 272 (374)
T ss_pred ccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHHHh
Confidence 9999999999998853222 235666 7787753 3556788888999999999996 6899999999
Q ss_pred hhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001705 566 AAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 566 A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
| |++|+||..||||++++||||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.+++++++
T Consensus 273 a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~ 348 (374)
T TIGR03088 273 L----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAA 348 (374)
T ss_pred c----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 9 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 646 GLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 646 ~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
+++.+ ++|||+.++++|.++|.++
T Consensus 349 a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 349 GRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99998 7999999999999999875
No 28
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=5.9e-34 Score=329.85 Aligned_cols=370 Identities=16% Similarity=0.210 Sum_probs=263.7
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
-||+|+++.-+ ..| +...||++++++++++.|+ ++|+++|..... | ...+ ...
T Consensus 3 ~~~~~~~~~~~------~~p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~~------~-~~~~--------~~~ 55 (380)
T PRK15484 3 DKIIFTVTPIF------SIP-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNPG------Y-PEYT--------KVN 55 (380)
T ss_pred ceEEEEeccCC------CCC-CccccHHHHHHHHhhhhcc-----CCeeEEEecCCC------C-Cchh--------hcc
Confidence 38999987754 233 3368999999999999993 589999987431 1 1111 123
Q ss_pred CCeEEEEecCCCCCCccccccCCcch--HHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYI--HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALN 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~--~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ 327 (1024)
+|+.++++++... |..-...|-.+ -.|...++.... . ....++||||+|... .....+..+..+
T Consensus 56 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~vi~v~~~~-~~~~~~~~~~~~ 121 (380)
T PRK15484 56 DNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAH-------K----FTITKDSVIVIHNSM-KLYRQIRERAPQ 121 (380)
T ss_pred CCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHH-------h----cCCCCCcEEEEeCcH-HhHHHHHhhCCC
Confidence 4677777765221 11100111111 011111211111 1 011468999999853 333334444567
Q ss_pred CCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 328 VPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
+|+|++.|+.+. ...+..++.|+++|+...+.+...++
T Consensus 122 ~~~v~~~h~~~~-----------------------------~~~~~~~~~ii~~S~~~~~~~~~~~~------------- 159 (380)
T PRK15484 122 AKLVMHMHNAFE-----------------------------PELLDKNAKIIVPSQFLKKFYEERLP------------- 159 (380)
T ss_pred CCEEEEEecccC-----------------------------hhHhccCCEEEEcCHHHHHHHHhhCC-------------
Confidence 899999996411 11245678999999876665433221
Q ss_pred hhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
..++.+||||+|.+.|.+... .....++...+++++|+++||+.
T Consensus 160 -----------~~~i~vIpngvd~~~~~~~~~-------------------------~~~~~~~~~~~~~~~il~~Grl~ 203 (380)
T PRK15484 160 -----------NADISIVPNGFCLETYQSNPQ-------------------------PNLRQQLNISPDETVLLYAGRIS 203 (380)
T ss_pred -----------CCCEEEecCCCCHHHcCCcch-------------------------HHHHHHhCCCCCCeEEEEeccCc
Confidence 127899999999887754321 01112233345678999999999
Q ss_pred CCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHh
Q 001705 488 PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 566 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A 566 (1024)
+.||++.+++|+..+. ...|++.| |+|+++.... .+...+..++.+++..++ .+|.|.|+++.+++..+|+.|
T Consensus 204 ~~Kg~~~Li~A~~~l~--~~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~a 277 (380)
T PRK15484 204 PDKGILLLMQAFEKLA--TAHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLA 277 (380)
T ss_pred cccCHHHHHHHHHHHH--HhCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhC
Confidence 9999999999999985 44577776 6787653211 123456677777777766 579999999999999999999
Q ss_pred hcCCcEEEecCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEE-EeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001705 567 AKTKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL-LVDPHDQNAIADALLKLLADKNMWSECRK 644 (1024)
Q Consensus 567 ~~~~dv~v~ps~~-Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gl-lv~p~d~~~la~aI~~ll~d~~~~~~~~~ 644 (1024)
|++|+||.+ |+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|++. .++++
T Consensus 278 ----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~ 352 (380)
T PRK15484 278 ----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAE 352 (380)
T ss_pred ----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHH
Confidence 999999975 999999999999999999999999999999999998 66899999999999999999985 77999
Q ss_pred HHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 645 NGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 645 ~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
++++.+ ++|||+.++++|++.|.+.
T Consensus 353 ~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 353 QAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 999987 7999999999999999754
No 29
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=6.6e-34 Score=330.48 Aligned_cols=386 Identities=19% Similarity=0.225 Sum_probs=265.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||+++.+. + ..||.++++.+||++|+++| |+|+|+|..... . ..+ + +..
T Consensus 1 mkIl~~~~~---------~----~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~-~--~~~----~--------~~~ 50 (392)
T cd03805 1 LRVAFIHPD---------L----GIGGAERLVVDAALALQSRG--HEVTIYTSHHDP-S--HCF----E--------ETK 50 (392)
T ss_pred CeEEEECCC---------C----CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCc-h--hcc----h--------hcc
Confidence 899999855 2 36999999999999999999 999999975211 0 000 0 111
Q ss_pred C-CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCC
Q 001705 250 C-GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNV 328 (1024)
Q Consensus 250 ~-gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~i 328 (1024)
. ++.+..++. ++++ .++..+..+... ...+...+...+.. ..+||+||+|....+.... ....+.
T Consensus 51 ~~~~~i~~~~~-----~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~Dvi~~~~~~~~~~~~--~~~~~~ 116 (392)
T cd03805 51 DGTLPVRVRGD-----WLPR-SIFGRFHILCAY----LRMLYLALYLLLLP--DEKYDVFIVDQVSACVPLL--KLFSPS 116 (392)
T ss_pred CCeeEEEEEeE-----EEcc-hhhHhHHHHHHH----HHHHHHHHHHHhcc--cCCCCEEEEcCcchHHHHH--HHhcCC
Confidence 2 244444331 1111 111111111111 11111111100111 1479999999765443322 222248
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHH-HHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYK-IMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~-~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
|++++.|.. +.. ... . .......|+ +++. .|+..++.||.|+++|+...+.+...++....
T Consensus 117 ~~i~~~h~~--~~~---~~~-~-~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--------- 178 (392)
T cd03805 117 KILFYCHFP--DQL---LAQ-R-GSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--------- 178 (392)
T ss_pred cEEEEEecC--hHH---hcC-C-CcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---------
Confidence 999999942 211 111 0 001111221 2222 37788999999999998777665444332111
Q ss_pred hhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
.++.|||||+|.+.|.+... . . ........++.++|+++||+.
T Consensus 179 ------------~~~~vi~n~vd~~~~~~~~~-~--~----------------------~~~~~~~~~~~~~i~~~grl~ 221 (392)
T cd03805 179 ------------NPREVVYPCVDTDSFESTSE-D--P----------------------DPGLLIPKSGKKTFLSINRFE 221 (392)
T ss_pred ------------CCcceeCCCcCHHHcCcccc-c--c----------------------cccccccCCCceEEEEEeeec
Confidence 13469999999988765431 0 0 001112246678999999999
Q ss_pred CCCCHHHHHHHHhhccccC-CCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH-cCCCCCEEeCCCCCCCCHHHHHH
Q 001705 488 PKKNVTTLLKAFGECQPLR-ELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK-YDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~-~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~-~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
+.||++.+++|+.++.+.. ..+++.| ++|+++.. .....++..++.+++++ +++.++|.|+|+++.+++..+|+
T Consensus 222 ~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~ 298 (392)
T cd03805 222 RKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLS 298 (392)
T ss_pred ccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHh
Confidence 9999999999999985321 0156666 67776531 12334667888999999 99999999999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001705 565 LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRK 644 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 644 (1024)
.| |++++||..|+||++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++++++.++++++
T Consensus 299 ~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~ 373 (392)
T cd03805 299 SA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGA 373 (392)
T ss_pred hC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999899999976 999999999999999999999999
Q ss_pred HHHHHH-hcCCHHHHHHHH
Q 001705 645 NGLKNI-HRFSWPEHCRNY 662 (1024)
Q Consensus 645 ~~~~~~-~~fsw~~~a~~~ 662 (1024)
++++.+ ++|||+.+++++
T Consensus 374 ~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 374 AGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHhcCHHHHhhhC
Confidence 999998 799999998764
No 30
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=4.4e-35 Score=340.66 Aligned_cols=358 Identities=15% Similarity=0.144 Sum_probs=281.3
Q ss_pred CeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 251 GAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 251 gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+..+..++..+. ..+++|..|||.+|++.+ .....++.|++++.+.+.++ |+||+|++++
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-----d~vWVhDYhL 143 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAAEG-----ATVWVHDYNL 143 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEecchh
Confidence 466677766443 356899999999986544 23344577888888877765 9999999999
Q ss_pred HHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHh
Q 001705 316 GEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWG 391 (1024)
Q Consensus 316 ~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~ 391 (1024)
.+++.++++.. +.++.|++| .+++.+.+++.+++.+.+++ .||+|.++|..++++
T Consensus 144 ~llp~~LR~~~~~~~IgfFlH------------------iPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~--- 202 (487)
T TIGR02398 144 WLVPGYIRQLRPDLKIAFFHH------------------TPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVEN--- 202 (487)
T ss_pred hHHHHHHHHhCCCCeEEEEee------------------CCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHH---
Confidence 99999999765 689999999 77888889999998877776 999999999999998
Q ss_pred cccCcchHHHHHHHHhhhcC----------------------ccccCCCCCcEEEeCCCCCCCCccccCCCCCCcccccc
Q 001705 392 LYDGFDLKLERKLRVRRQRG----------------------VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSL 449 (1024)
Q Consensus 392 ~~~~f~~~~~r~l~~~~~~g----------------------~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~ 449 (1024)
|...+.++|+.....+ +...| +..++.++|+|||++.|.+...
T Consensus 203 ----Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~g-r~v~v~~~PiGID~~~f~~~~~---------- 267 (487)
T TIGR02398 203 ----FVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGN-RVVKLGAHPVGTDPERIRSALA---------- 267 (487)
T ss_pred ----HHHHHHHHhCCccccccccccccccccccccccccccceeECC-EEEEEEEEECEecHHHHHHHhc----------
Confidence 7778888887655332 33334 3448999999999999865431
Q ss_pred ccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EEecC-----C
Q 001705 450 IGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-ILGNR-----D 519 (1024)
Q Consensus 450 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-IvG~~-----~ 519 (1024)
........+.+++.+ .++++|+++||+|+.||+..+++||+++ +..+|. ++| ++|.. +
T Consensus 268 --------~~~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~--L~~~Pe~~gkv~Lvqi~~psr~~v~ 335 (487)
T TIGR02398 268 --------AASIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERL--LERRPELLGKVTLVTACVPAASGMT 335 (487)
T ss_pred --------CchHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHH--HHhCccccCceEEEEEeCCCcccch
Confidence 000111112222222 3789999999999999999999999999 456664 455 34332 4
Q ss_pred CcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC----c
Q 001705 520 DIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL----P 595 (1024)
Q Consensus 520 ~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~----P 595 (1024)
.|+++..+..+..++|++...+.++.+.++|.+.++.+++.++|+.| ||+++||++||||||++||+||+. |
T Consensus 336 ~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~Gv 411 (487)
T TIGR02398 336 IYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGV 411 (487)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCC
Confidence 56667777777788888888888999999999999999999999999 999999999999999999999977 8
Q ss_pred EEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 596 VVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMW-SECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 596 VVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~-~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+|.|..+|..+.+ ..+++|||+|++++|++|.++|++|... ++..+..++.+..++...|++.|+..+..
T Consensus 412 LILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 412 LVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred EEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 8888877776554 4699999999999999999999987644 44445555566899999999999987753
No 31
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.2e-33 Score=337.82 Aligned_cols=391 Identities=16% Similarity=0.126 Sum_probs=262.5
Q ss_pred CCCce-EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCce------------EEEEEecCCCCCCCCcc
Q 001705 166 SSRNL-YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY------------RVDLLTRQIASPEVDSS 232 (1024)
Q Consensus 166 ~~~~m-kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~------------~V~vlt~~~~~p~~~~~ 232 (1024)
+.+.. ||++|... + ..||+++++.+|+.+|.+++ + .+.|++...........
T Consensus 277 ~~~~~~rIl~vi~s---------l----~~GGAEr~~~~La~~l~~~~--~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~ 341 (694)
T PRK15179 277 PESFVGPVLMINGS---------L----GAGGAERQFVNTAVALQSAI--QQGQSIAGYGVLGPVQVVCRSLRSREGADF 341 (694)
T ss_pred CCCCcceEEEEeCC---------C----CCCcHHHHHHHHHHHHHhcc--cCcccccCccCCCCcEEEEEecccccCcch
Confidence 45566 99999855 2 36899999999999999984 2 23444321110000000
Q ss_pred cCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccC-CcchHH----HHHHHHHHHHHHHHHHHhhhcCCCCCcceE
Q 001705 233 YGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESL-WPYIHE----FVDGALNHIVNMARAIGEQVNGGKPTWPYV 307 (1024)
Q Consensus 233 y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~l-wp~~~~----f~~~~l~~~~~~~~~l~~~~~~g~~~~pDv 307 (1024)
+.. .+ ...|+.++.++..+. .+...... ...+.. ...........+.+.+.+ .+|||
T Consensus 342 ~~~---~L-------~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~-------~kpDI 403 (694)
T PRK15179 342 FAA---TL-------ADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS-------SVPSV 403 (694)
T ss_pred HHH---HH-------HhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-------cCCcE
Confidence 000 11 124788887765432 11111100 011110 111222333344444444 57999
Q ss_pred EEEcCCChHHHHHHHHccCCCCEEE-EeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHH
Q 001705 308 IHGHYADAGEVAAHLSGALNVPMVL-TGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEI 386 (1024)
Q Consensus 308 Ih~h~~~~~~~a~~l~~~~~ipiV~-t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~ 386 (1024)
||+|......++.++++..++|+|+ +.|++....... .....|. .+ ........++.+++.|....
T Consensus 404 VH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~---------~~~~~~~---~l-~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 404 VHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPD---------RYRVEYD---II-YSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred EEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchh---------HHHHHHH---HH-HHHHHhcCCeEEEeCcHHHH
Confidence 9999988888888888778999876 557542211100 0000111 11 11111224556677776655
Q ss_pred HHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchH
Q 001705 387 EMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWS 466 (1024)
Q Consensus 387 ~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 466 (1024)
+.+...+ |.+..++.|||||||...|.+... ...
T Consensus 471 ~~l~~~~----------------------g~~~~kI~VI~NGVd~~~f~~~~~------------------------~~~ 504 (694)
T PRK15179 471 HRYADWL----------------------GVDERRIPVVYNGLAPLKSVQDDA------------------------CTA 504 (694)
T ss_pred HHHHHHc----------------------CCChhHEEEECCCcCHHhcCCCch------------------------hhH
Confidence 5432222 122238999999999887754221 000
Q ss_pred HHhhh--hCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcC
Q 001705 467 EVMRF--FTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYD 543 (1024)
Q Consensus 467 ~~~~~--~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~ 543 (1024)
....+ ....+.++|+++||+.+.||++.+++|+..+. ...+++.| |+|+++. ...+.+++++++
T Consensus 505 ~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~--~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lg 571 (694)
T PRK15179 505 MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFA--ASHPKVRFIMVGGGPL-----------LESVREFAQRLG 571 (694)
T ss_pred HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHH--HHCcCeEEEEEccCcc-----------hHHHHHHHHHcC
Confidence 00011 11245678999999999999999999999885 34567776 7888763 356778999999
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCH-
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQ- 622 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~- 622 (1024)
+.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|.
T Consensus 572 L~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 572 MGERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVT 645 (694)
T ss_pred CCCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCC
Confidence 99999999995 5899999999 9999999999999999999999999999999999999999999999998874
Q ss_pred -HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 623 -NAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 623 -~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
++++++|.+++.+......+++++++.+ ++|||+.++++|+++|+
T Consensus 646 ~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 646 APDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666677888999998 69999999999999984
No 32
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=4.1e-35 Score=346.22 Aligned_cols=354 Identities=17% Similarity=0.157 Sum_probs=259.7
Q ss_pred CCeEEEEecCCCC-----CCccccccCCcchHHHH----------HHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001705 250 CGAYIIRIPCGAR-----DKYIAKESLWPYIHEFV----------DGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314 (1024)
Q Consensus 250 ~gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~----------~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~ 314 (1024)
.+..++.++..+. ..++++..|||.+|++. ......++.+++.+.+.++++ |+||+|+++
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~-----d~iwihDyh 141 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLRPG-----DLVWVHDYH 141 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEeChh
Confidence 4667777765433 24678999999998755 334445577888888877654 999999999
Q ss_pred hHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHh---hhcCCEEEeCCHHHHHHHH
Q 001705 315 AGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELG---LDASEMVVTSTRQEIEMQW 390 (1024)
Q Consensus 315 ~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~---l~~Ad~Vi~~S~~~~~~~~ 390 (1024)
...++.++++.. +.|++|+.| .+++.+.+++.+++.+.+ +-.+|+|+++|..+++.
T Consensus 142 l~llp~~lr~~~~~~~i~~f~H------------------ipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~-- 201 (460)
T cd03788 142 LLLLPQMLRERGPDARIGFFLH------------------IPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARN-- 201 (460)
T ss_pred hhHHHHHHHhhCCCCeEEEEEe------------------CCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHH--
Confidence 999999998765 689999999 444555556655544333 34799999999988877
Q ss_pred hcccCcchHHHHHHHHhhh--cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHH
Q 001705 391 GLYDGFDLKLERKLRVRRQ--RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEV 468 (1024)
Q Consensus 391 ~~~~~f~~~~~r~l~~~~~--~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 468 (1024)
|...+.++++.... .++...| +..++.+||||||++.|.+... .+.....+
T Consensus 202 -----Fl~~~~~~l~~~~~~~~~i~~~g-~~~~i~vip~GID~~~f~~~~~---------------------~~~~~~~~ 254 (460)
T cd03788 202 -----FLSCCSRLLGLEVTDDGGVEYGG-RRVRVGAFPIGIDPDAFRKLAA---------------------SPEVQERA 254 (460)
T ss_pred -----HHHHHHHHcCCcccCCceEEECC-EEEEEEEEeCeEcHHHHHHHhc---------------------CchhHHHH
Confidence 45555566554433 3333333 3348999999999998865531 11111111
Q ss_pred hh-hhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EEE-EEecCCCcccccccchHHHHHHHHHHHHc
Q 001705 469 MR-FFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 469 ~~-~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~ 542 (1024)
.+ ....+++++|+++||+++.||++.+++||+.+. ...|+ ++| ++|....-+. ....++..++.++++++
T Consensus 255 ~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll--~~~p~~~~~v~Lv~vg~~~~g~~--~~~~~l~~~l~~~v~~i 330 (460)
T cd03788 255 AELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLL--ERYPEWRGKVVLVQIAVPSRTDV--PEYQELRREVEELVGRI 330 (460)
T ss_pred HHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHH--HhChhhcCCEEEEEEccCCCcCc--HHHHHHHHHHHHHHHHH
Confidence 11 122467899999999999999999999999885 34443 444 4543211000 01123445555555443
Q ss_pred C-------CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhccC
Q 001705 543 D-------LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP----VVATKNGGPVDILKAL 611 (1024)
Q Consensus 543 ~-------l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P----VVat~~Gg~~eii~~~ 611 (1024)
+ +.+.+.+.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+. +
T Consensus 331 n~~~g~~~~~~v~~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~ 403 (460)
T cd03788 331 NGKFGTLDWTPVRYLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---L 403 (460)
T ss_pred HhccCCCCceeEEEEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---c
Confidence 2 44556677899999999999999 9999999999999999999999999 999988887776 4
Q ss_pred CcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 612 NNGLLVDPHDQNAIADALLKLLADK-NMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 612 ~~Gllv~p~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
.+|++|+|+|++++|++|.++++++ ++++.+++++++.+.+|||..|+++|++.+
T Consensus 404 ~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 404 SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 6899999999999999999999965 677788888888889999999999998765
No 33
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.6e-32 Score=314.36 Aligned_cols=359 Identities=20% Similarity=0.253 Sum_probs=255.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.+++ ++..||+++++.+|+++|.++| |+|+|+|.....+. . . ...+
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~-------~-~--------~~~~ 52 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQ-------K-E--------TEYN 52 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCC-------c-c--------cccC
Confidence 6899988876 5789999999999999999999 99999998643211 0 1 2235
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
|++++++|.... .. +..+. .....+...+.. ..++|+||...+....++. +.+..++|+
T Consensus 53 ~i~~~~~~~~~~-~~---------~~~~~----~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~-~~~~~~~~~ 111 (363)
T cd04955 53 GVRLIHIPAPEI-GG---------LGTII----YDILAILHALFV------KRDIDHVHALGPAIAPFLP-LLRLKGKKV 111 (363)
T ss_pred CceEEEcCCCCc-cc---------hhhhH----HHHHHHHHHHhc------cCCeEEEEecCccHHHHHH-HHHhcCCCE
Confidence 889998885321 00 01111 111111111111 1356777766554433333 344458999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
+++.|++..... .+. . ....+.+. .++..++.||.|++.|+...+.+...|+.
T Consensus 112 v~~~h~~~~~~~-------~~~-~--~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------------- 164 (363)
T cd04955 112 VVNMDGLEWKRA-------KWG-R--PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR--------------- 164 (363)
T ss_pred EEEccCcceeec-------ccc-c--chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC---------------
Confidence 999998633210 000 0 11112222 25667889999999998877765443322
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
+..+||||+|...+.+... ....+. .++++.|+++||+.+.|
T Consensus 165 ----------~~~~i~ngv~~~~~~~~~~---------------------------~~~~~~-~~~~~~i~~~G~~~~~K 206 (363)
T cd04955 165 ----------DSTYIPYGADHVVSSEEDE---------------------------ILKKYG-LEPGRYYLLVGRIVPEN 206 (363)
T ss_pred ----------CCeeeCCCcChhhcchhhh---------------------------hHHhcC-CCCCcEEEEEecccccC
Confidence 3389999999876543110 001111 13356789999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHH-HcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~-~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
|++.+++|+.++.. ++.| ++|+++.... +.+.+. .++..++|.|+|+++.+++..+|..|
T Consensus 207 g~~~li~a~~~l~~-----~~~l~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a-- 268 (363)
T cd04955 207 NIDDLIEAFSKSNS-----GKKLVIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA-- 268 (363)
T ss_pred CHHHHHHHHHhhcc-----CceEEEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC--
Confidence 99999999998842 3444 7888754222 222222 56778899999999999999999999
Q ss_pred CCcEEEecCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 569 TKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~~-Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.+++.+++
T Consensus 269 --d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~ 342 (363)
T cd04955 269 --ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAAR 342 (363)
T ss_pred --CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999875 7999988776 99999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.+ ++|||+.++++|++.|+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 343 ERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 58999999999999873
No 34
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1e-32 Score=317.05 Aligned_cols=278 Identities=27% Similarity=0.407 Sum_probs=225.1
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||+|+...+..+..+++.+++|+|++.|+.......... ....+...+. .+..+++.+|.|++.|
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~d~ii~~s 150 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL--------LRSRWALYAR--RRRRLARRAALFIAVS 150 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh--------cccchhHHHH--HHHHHHHhcCEEEECC
Confidence 57999999988777778888888999999999975322111000 0000112222 2556788999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+... ++. ..++.++|||+|.+.|.+...
T Consensus 151 ~~~~~~~~~~--~~~---------------------~~~i~vi~~g~d~~~~~~~~~----------------------- 184 (367)
T cd05844 151 QFIRDRLLAL--GFP---------------------PEKVHVHPIGVDTAKFTPATP----------------------- 184 (367)
T ss_pred HHHHHHHHHc--CCC---------------------HHHeEEecCCCCHHhcCCCCC-----------------------
Confidence 8777664332 111 238999999999887754321
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
..+.+.|+++|++.+.||++.+++|+..+.+ ..+++.| ++|+++. .+++..++++
T Consensus 185 -----------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~--~~~~~~l~ivG~g~~-----------~~~~~~~~~~ 240 (367)
T cd05844 185 -----------ARRPPRILFVGRFVEKKGPLLLLEAFARLAR--RVPEVRLVIIGDGPL-----------LAALEALARA 240 (367)
T ss_pred -----------CCCCcEEEEEEeeccccChHHHHHHHHHHHH--hCCCeEEEEEeCchH-----------HHHHHHHHHH
Confidence 1346789999999999999999999999853 3566666 7786542 4567788889
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC------CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEE
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL------VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGL 615 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~------~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gl 615 (1024)
+++.++|.|.|+++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.|+..|++.++.+|+
T Consensus 241 ~~~~~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~ 316 (367)
T cd05844 241 LGLGGRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGL 316 (367)
T ss_pred cCCCCeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeE
Confidence 8998999999999999999999999 99999997 5999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Q 001705 616 LVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLS 664 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~ 664 (1024)
++++.|+++++++|.+++++++++++++.++++.+ ++|||+.+++++.+
T Consensus 317 ~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 317 LVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred EECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999999999999999999999999999999998 69999999998865
No 35
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=3.4e-33 Score=322.91 Aligned_cols=366 Identities=17% Similarity=0.187 Sum_probs=246.6
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ...||+++++.+|++.|.+.| |+|++++.... +.. +...
T Consensus 1 ki~~~~~~-------------~~~GGv~~~~~~l~~~l~~~g--~~v~~~~~~~~-~~~---~~~~-------------- 47 (372)
T cd03792 1 KVLHVNST-------------PYGGGVAEILHSLVPLMRDLG--VDTRWEVIKGD-PEF---FNVT-------------- 47 (372)
T ss_pred CeEEEeCC-------------CCCCcHHHHHHHHHHHHHHcC--CCceEEecCCC-hhH---HHHH--------------
Confidence 57888743 357999999999999999999 99999987421 110 0000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
. .+..+..++. ..++.. +...+. ....... ..... ..+|||||+|++....++. +.+..++|+
T Consensus 48 ~-~~~~~~~g~~-~~~~~~----~~~~~~----~~~~~~~---~~~~~---~~~~Dvv~~h~~~~~~~~~-~~~~~~~~~ 110 (372)
T cd03792 48 K-KFHNALQGAD-IELSEE----EKEIYL----EWNEENA---ERPLL---DLDADVVVIHDPQPLALPL-FKKKRGRPW 110 (372)
T ss_pred H-HhhHhhcCCC-CCCCHH----HHHHHH----HHHHHHh---ccccc---cCCCCEEEECCCCchhHHH-hhhcCCCeE
Confidence 0 1111111221 111111 000111 1111111 10111 1479999999886433332 233348999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
|++.|+.... .....+++ .+..+..+|.+++.+.+.... . +.
T Consensus 111 i~~~H~~~~~-------------~~~~~~~~------~~~~~~~~d~~i~~~~~~~~~---~---~~------------- 152 (372)
T cd03792 111 IWRCHIDLSS-------------PNRRVWDF------LQPYIEDYDAAVFHLPEYVPP---Q---VP------------- 152 (372)
T ss_pred EEEeeeecCC-------------CcHHHHHH------HHHHHHhCCEEeecHHHhcCC---C---CC-------------
Confidence 9999964211 00111111 234567899999988433221 0 11
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcc-hHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPM-WSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
. +..+||||+|........ ..+.. .....++...+++++|+++||+++.
T Consensus 153 --------~-~~~vipngvd~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~ 202 (372)
T cd03792 153 --------P-RKVIIPPSIDPLSGKNRE---------------------LSPADIEYILEKYGIDPERPYITQVSRFDPW 202 (372)
T ss_pred --------C-ceEEeCCCCCCCccccCC---------------------CCHHHHHHHHHHhCCCCCCcEEEEEeccccc
Confidence 1 333999999975321111 01111 1223345556788999999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC--CCCCHHHHHHHh
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH--KQSDVPDIYRLA 566 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~--~~~el~~ly~~A 566 (1024)
||++.+++|+..+.+ ..+++.| ++|+++..+. .....+.++.+..++.++|.|.|.. +.+++..+|+.|
T Consensus 203 Kg~~~ll~a~~~l~~--~~~~~~l~i~G~g~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 274 (372)
T cd03792 203 KDPFGVIDAYRKVKE--RVPDPQLVLVGSGATDDP------EGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRAS 274 (372)
T ss_pred cCcHHHHHHHHHHHh--hCCCCEEEEEeCCCCCCc------hhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhC
Confidence 999999999999853 3345554 7788754211 1112233444456777889998876 788999999999
Q ss_pred hcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001705 567 AKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646 (1024)
Q Consensus 567 ~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 646 (1024)
|+|++||.+||||++++||||||+|||+|+.||..+++.++.+|++++ +.++++.+|.++++++++++++++++
T Consensus 275 ----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll~~~~~~~~~~~~a 348 (372)
T cd03792 275 ----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLLRDPELRRKMGANA 348 (372)
T ss_pred ----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997 56789999999999999999999999
Q ss_pred HHHH-hcCCHHHHHHHHHHHHHH
Q 001705 647 LKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 647 ~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
++.+ ++|||+..+++|++.|+.
T Consensus 349 ~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 349 REHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHh
Confidence 9998 699999999999999975
No 36
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.2e-32 Score=322.54 Aligned_cols=293 Identities=21% Similarity=0.282 Sum_probs=233.3
Q ss_pred CcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhH-HHHhcCCCCcchh-hHHHHHHHHHHHHHhhhcCCEEE
Q 001705 303 TWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFE-QLLKQGRLPKDIN-ASYKIMRRIEAEELGLDASEMVV 379 (1024)
Q Consensus 303 ~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~-~l~~~g~~~~~i~-~~y~~~r~i~~e~~~l~~Ad~Vi 379 (1024)
.++|+||+|.. .+++++.++++..++|+|+|.|+....... .+........... ...++++.+ ++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESL--GRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHH--HHHHHHhCCEEE
Confidence 37899999975 467778888888999999999997543221 1211110000111 112233333 567889999999
Q ss_pred eCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccC
Q 001705 380 TSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKR 459 (1024)
Q Consensus 380 ~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1024)
+.|+...+.+... |.+..++.|||||+|.+.|.+...
T Consensus 250 ~~s~~~~~~~~~~-----------------------g~~~~ki~vIpNgid~~~f~~~~~-------------------- 286 (475)
T cd03813 250 TLYEGNRERQIED-----------------------GADPEKIRVIPNGIDPERFAPARR-------------------- 286 (475)
T ss_pred ecCHHHHHHHHHc-----------------------CCCHHHeEEeCCCcCHHHcCCccc--------------------
Confidence 9998766554321 112238999999999988865431
Q ss_pred CCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHH
Q 001705 460 NLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKL 538 (1024)
Q Consensus 460 ~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~ 538 (1024)
. ...++.++|+++||+.+.||++.+++|+..+.+ ..+++.+ |+|.++. ...+..++.++
T Consensus 287 ~-----------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~p~~~l~IvG~g~~-------~~~~~~e~~~l 346 (475)
T cd03813 287 A-----------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRK--KIPDAEGWVIGPTDE-------DPEYAEECREL 346 (475)
T ss_pred c-----------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHH--hCCCeEEEEECCCCc-------ChHHHHHHHHH
Confidence 0 012467899999999999999999999998853 4577776 7787752 23567889999
Q ss_pred HHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc------CC
Q 001705 539 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKA------LN 612 (1024)
Q Consensus 539 i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~------~~ 612 (1024)
++++++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.|+..|++.+ +.
T Consensus 347 i~~l~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~ 419 (475)
T cd03813 347 VESLGLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGP 419 (475)
T ss_pred HHHhCCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCC
Confidence 99999999999999 57999999999 9999999999999999999999999999999999999988 56
Q ss_pred cEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 613 NGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+|++++|.|+++++++|.++++|++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 420 ~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 420 AGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999999 68999999999999873
No 37
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1.1e-33 Score=325.18 Aligned_cols=362 Identities=17% Similarity=0.159 Sum_probs=286.7
Q ss_pred CCeEEEEecCCCC-----CCccccccCCcchHHHHH----------HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001705 250 CGAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD----------GALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314 (1024)
Q Consensus 250 ~gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~----------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~ 314 (1024)
.++....++..+. ..+++|..|||.+|++.+ .....++.|++++.+.+.+| |+||+|+++
T Consensus 59 ~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-----D~VWVHDYh 133 (474)
T PRK10117 59 GNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLKDD-----DIIWIHDYH 133 (474)
T ss_pred CCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEeccH
Confidence 3566777765433 357899999999987543 23344577888888888775 999999999
Q ss_pred hHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHH
Q 001705 315 AGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQW 390 (1024)
Q Consensus 315 ~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~ 390 (1024)
+.+++.++++.. ..++.|++| .+++...+++.+++.+.+++ +||+|.++|..++++
T Consensus 134 L~llp~~LR~~~~~~~IgFFlH------------------iPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rn-- 193 (474)
T PRK10117 134 LLPFASELRKRGVNNRIGFFLH------------------IPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLA-- 193 (474)
T ss_pred hhHHHHHHHHhCCCCcEEEEEe------------------CCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHH--
Confidence 999999999765 689999999 77888889999998877776 999999999999988
Q ss_pred hcccCcchHHHHHHHHhhhcC-ccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHh
Q 001705 391 GLYDGFDLKLERKLRVRRQRG-VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469 (1024)
Q Consensus 391 ~~~~~f~~~~~r~l~~~~~~g-~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 469 (1024)
|...+.++++.....| ...++.+..++.++|.|||++.|..... .+.......++
T Consensus 194 -----Fl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~-------------------~~~~~~~~~lr 249 (474)
T PRK10117 194 -----FLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAA-------------------GPLPPKLAQLK 249 (474)
T ss_pred -----HHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhh-------------------chHHHHHHHHH
Confidence 7777788777665332 2222233448999999999998854431 01111112222
Q ss_pred hhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCC----cEEEE-E-----ecCCCcccccccchHHHHHHHHHH
Q 001705 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA----NMTLI-L-----GNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 470 ~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~LI-v-----G~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
..+ .++++|+.++|+|+.||+...++||+++. ..+| +++|+ + ++.+.|+++..+..+..++|++..
T Consensus 250 ~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL--~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~f 325 (474)
T PRK10117 250 AEL--KNVQNIFSVERLDYSKGLPERFLAYEALL--EKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKY 325 (474)
T ss_pred HHc--CCCeEEEEecccccccCHHHHHHHHHHHH--HhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhcc
Confidence 222 46889999999999999999999999994 5555 34443 2 455667888888899999999999
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc------CCcEEEcCCCCchhhhccCCc
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY------GLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~------G~PVVat~~Gg~~eii~~~~~ 613 (1024)
.+.+|.+..++...++++++.++|+.| ||+++||+.||||||++||.|| |+.|++..+|+..++ ..
T Consensus 326 g~~~w~Pv~y~~~~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~ 397 (474)
T PRK10117 326 GQLGWTPLYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TS 397 (474)
T ss_pred CCCCceeEEEecCCCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CC
Confidence 999999999999999999999999999 9999999999999999999999 667888888888777 35
Q ss_pred EEEeCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 614 GLLVDPHDQNAIADALLKLLADKNM-WSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~d~~~-~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+++|||+|.+++|+||.++|++|.. +++..+..++.+..++...|++.|++.+..+...
T Consensus 398 AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999998654 4444455555669999999999999999887543
No 38
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.7e-32 Score=316.07 Aligned_cols=385 Identities=16% Similarity=0.147 Sum_probs=258.0
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHH----HHHHHHHcCCC------ceEEEEEecCCCCCCCCcccCCCcccc
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVV----ELARALANTEG------VYRVDLLTRQIASPEVDSSYGEPNEML 240 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~----~La~aLa~~g~------v~~V~vlt~~~~~p~~~~~y~~~~e~l 240 (1024)
.+++++.. +| .||+++.++ ++++.+.+.+. -..|.|+||... |....++.-+.- .
T Consensus 163 ~~~~~~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~ 227 (578)
T PRK15490 163 RLALCTGS---------LG----SGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLT-PELRQDFFLKEV-L 227 (578)
T ss_pred ceEEEecC---------CC----CCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecC-cccCcchhHHHH-H
Confidence 57888744 66 699999999 55555555541 126889998764 222222211110 0
Q ss_pred CCCCCCCCCCCeEEEEecCCCCCCcccccc-CCcchHHHHHH----HHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh
Q 001705 241 SCPSDGTGSCGAYIIRIPCGARDKYIAKES-LWPYIHEFVDG----ALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA 315 (1024)
Q Consensus 241 ~~~~~~~~~~gv~i~rip~~~~~~~~~k~~-lwp~~~~f~~~----~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~ 315 (1024)
+...++..+-.++. ..+.+-. +-|.+..|+.+ +..-+..+...+.+ .+|||||+|...+
T Consensus 228 -----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ir~-------~rpDIVHt~~~~a 291 (578)
T PRK15490 228 -----EEQVEVLEIAKITG----NLFDDATIESPELRLLLSHLPPVCKYGIKHLVPHLCE-------RKLDYLSVWQDGA 291 (578)
T ss_pred -----hcCCceEEeeccch----hhhhhccccchHHHHHHhcCChHHHHHHHHHHHHHHH-------cCCCEEEEcCccc
Confidence 01123344444442 1122221 23434444332 22233444444444 6899999998876
Q ss_pred HHHHHHHHccCCCCEEEE-eCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCE------EEeCCHHHHHH
Q 001705 316 GEVAAHLSGALNVPMVLT-GHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEM------VVTSTRQEIEM 388 (1024)
Q Consensus 316 ~~~a~~l~~~~~ipiV~t-~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~------Vi~~S~~~~~~ 388 (1024)
...+.+.+...++|++++ .|++.... . .+.+..|...+..++. +++.+....+.
T Consensus 292 ~l~g~laA~lagvpviv~~~h~~~~~~----------------~---~r~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~ 352 (578)
T PRK15490 292 CLMIALAALIAGVPRIQLGLRGLPPVV----------------R---KRLFKPEYEPLYQALAVVPGVDFMSNNHCVTRH 352 (578)
T ss_pred HHHHHHHHHhcCCCEEEEeecccCCcc----------------h---hhHHHHHHHHhhhhceeEecchhhhccHHHHHH
Confidence 666777776679999665 56421110 0 0111122233344444 34444433333
Q ss_pred HHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC-cchHH
Q 001705 389 QWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP-PMWSE 467 (1024)
Q Consensus 389 ~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~ 467 (1024)
+...+ +.+..++.|||||||...|.+... .+ ..+..
T Consensus 353 l~~~l----------------------gip~~KI~VIyNGVD~~rf~p~~~---------------------~~~~~r~~ 389 (578)
T PRK15490 353 YADWL----------------------KLEAKHFQVVYNGVLPPSTEPSSE---------------------VPHKIWQQ 389 (578)
T ss_pred HHHHh----------------------CCCHHHEEEEeCCcchhhcCccch---------------------hhHHHHHH
Confidence 22221 122348999999999988866431 00 00110
Q ss_pred HhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCC
Q 001705 468 VMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG 546 (1024)
Q Consensus 468 ~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~ 546 (1024)
. +....++.++|+++||+.+.||...+++++..+. ...|++.| |+|+++. ..++.++++++++.+
T Consensus 390 ~-~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~ll--k~~pdirLvIVGdG~~-----------~eeLk~la~elgL~d 455 (578)
T PRK15490 390 F-TQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYL--QHHPATRFVLVGDGDL-----------RAEAQKRAEQLGILE 455 (578)
T ss_pred h-hhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHH--hHCCCeEEEEEeCchh-----------HHHHHHHHHHcCCCC
Confidence 0 1112355689999999999999999999998874 34567766 7788753 456788899999999
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHH
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIA 626 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la 626 (1024)
+|.|+|+ .++++.+|+.| |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|++|+|.|+.+++
T Consensus 456 ~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa 529 (578)
T PRK15490 456 RILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLD 529 (578)
T ss_pred cEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHH
Confidence 9999999 57999999999 99999999999999999999999999999999999999999999999999999998
Q ss_pred HHH---HHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001705 627 DAL---LKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 627 ~aI---~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
+++ .++.........+++++++.+ ++|||+.++++|.+.|.+
T Consensus 530 ~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 530 QACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 887 445555555667889999999 699999999999999974
No 39
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=100.00 E-value=1.8e-33 Score=304.94 Aligned_cols=244 Identities=24% Similarity=0.417 Sum_probs=189.8
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||.+.+......+.+.++.... +++.|+++|||++.++++++.+.+++ .||++||++|++||+. .
T Consensus 4 ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~----~~~~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~-~ 76 (247)
T PF05116_consen 4 LLASDLDGTLIDGDDEALARLEELLEQQAR----PEILFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYG-E 76 (247)
T ss_dssp EEEEETBTTTBHCHHHHHHHHHHHHHHHHC----CGEEEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEES-S
T ss_pred EEEEECCCCCcCCCHHHHHHHHHHHHHhhC----CCceEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEc-C
Confidence 567999999774445566777777773333 58999999999999999999998884 5999999999999995 3
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
...+|..|..++...|..+.++.++..+.. +..+....+..||++|++........+++|++.|+..+.++++
T Consensus 77 ~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~-------l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~ 149 (247)
T PF05116_consen 77 NWQPDEEWQAHIDERWDRERVEEILAELPG-------LRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNV 149 (247)
T ss_dssp TTEE-HHHHHHHHTT--HHHHHHHHHCHCC-------EEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEE
T ss_pred CCcChHHHHHHHHhcCChHHHHHHHHHhhC-------cccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeE
Confidence 677899999999999999889888887765 4577777888999999997665444588999999999999999
Q ss_pred EEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
++|++. +|||+|.++|||.||+||+++|++++++++++ |||+| | ++||.....||+|+ ||.++++......
T Consensus 150 i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a-GDSgN-D-~~mL~~~~~~vvV~----Na~~e~~~~~~~~- 220 (247)
T PF05116_consen 150 IYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLVA-GDSGN-D-LEMLEGGDHGVVVG----NAQPELLSWLLEK- 220 (247)
T ss_dssp EECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEEE-ESSGG-G-HHHHCCSSEEEE-T----TS-HHHHHHHHHC-
T ss_pred EEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE-eCCCC-c-HHHHcCcCCEEEEc----CCCHHHHHHHHHh-
Confidence 999886 99999999999999999999999999999997 99999 9 99999999999999 9999933321100
Q ss_pred CCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
....++| |++....+.||.++|+|||+
T Consensus 221 -----~~~~~~i-y~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 221 -----LRQQERI-YFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp -----C-TTE---EE-SS-THHHHHHHHHHTTT
T ss_pred -----cccCCce-EecCCCCcHHHHHHHHHcCC
Confidence 0012233 56678889999999999986
No 40
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=9.6e-32 Score=307.16 Aligned_cols=341 Identities=23% Similarity=0.296 Sum_probs=255.8
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
.||.++++.+|+++|+++| |+|.+++...... .. ....|+.++.++..... .+.
T Consensus 9 ~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~~~-------~~----------~~~~~~~~~~~~~~~~~-------~~~ 62 (355)
T cd03819 9 SGGVERGTLELARALVERG--HRSLVASAGGRLV-------AE----------LEAEGSRHIKLPFISKN-------PLR 62 (355)
T ss_pred cCcHHHHHHHHHHHHHHcC--CEEEEEcCCCchH-------HH----------HHhcCCeEEEccccccc-------hhh
Confidence 5999999999999999999 9999998642100 01 11236777777643221 111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+ .....+.+.+.+ .+||+||+|.....+.+.++.+..++|++++.|+......
T Consensus 63 ~~--------~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----------- 116 (355)
T cd03819 63 IL--------LNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF----------- 116 (355)
T ss_pred hH--------HHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH-----------
Confidence 11 111122222322 5799999999877777777777789999999997633210
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
.....+..+|.+++.|+...+.+...++ .+..++.+||||+|...
T Consensus 117 -------------~~~~~~~~~~~vi~~s~~~~~~~~~~~~----------------------~~~~k~~~i~ngi~~~~ 161 (355)
T cd03819 117 -------------RYNAIMARGDRVIAVSNFIADHIRENYG----------------------VDPDRIRVIPRGVDLDR 161 (355)
T ss_pred -------------HHHHHHHhcCEEEEeCHHHHHHHHHhcC----------------------CChhhEEEecCCccccc
Confidence 1233467899999999877766432222 12238999999999988
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcch-HHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMW-SEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~ 512 (1024)
|.+... .+... ..+.++...++.++|+++||+.+.||++.+++|+..+.+ ..+++.
T Consensus 162 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~--~~~~~~ 218 (355)
T cd03819 162 FDPGAV---------------------PPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKK--DDPDVH 218 (355)
T ss_pred cCcccc---------------------chHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHh--cCCCeE
Confidence 754431 00001 122233345678899999999999999999999999863 345666
Q ss_pred E-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-CCCCCCHHHHHHH
Q 001705 513 L-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-LVEPFGLTIIEAA 590 (1024)
Q Consensus 513 L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~~Egfgl~llEAm 590 (1024)
+ ++|.++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++++|| ..|+||++++|||
T Consensus 219 l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~EA~ 285 (355)
T cd03819 219 LLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAVEAQ 285 (355)
T ss_pred EEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHHHHH
Confidence 6 778776432 345666778888899899999999 78999999999 9999999 7899999999999
Q ss_pred HcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH-hCHHHHHHHHHHHHHHH-hcCCHHH
Q 001705 591 AYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL-ADKNMWSECRKNGLKNI-HRFSWPE 657 (1024)
Q Consensus 591 A~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll-~d~~~~~~~~~~~~~~~-~~fsw~~ 657 (1024)
|||+|||+++.||..|++.++.+|++++++|+++++++|..++ .++++++++++++++.+ ++|||+.
T Consensus 286 a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 286 AMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred hcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999988999999999999999997555 48999999999999999 6999975
No 41
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.5e-31 Score=303.47 Aligned_cols=352 Identities=22% Similarity=0.275 Sum_probs=256.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
|||+|+.. |+ |+.||.++++.+|+++|.+.| |+|+|++........ . ....
T Consensus 1 kil~i~~~---------~~--p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~---------~~~~ 51 (357)
T cd03795 1 RVLHVGKF---------YP--PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------D---------EERN 51 (357)
T ss_pred CeeEecCC---------CC--CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------h---------hhcc
Confidence 68999866 33 569999999999999999999 999999886432210 0 1123
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
+..+++++.... ...++....+.. ... + ...+||+||+|+..............++|+
T Consensus 52 ~~~~~~~~~~~~------~~~~~~~~~~~~----~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~ 109 (357)
T cd03795 52 GHRVIRAPSLLN------VASTPFSPSFFK----QLK-----K-------LAKKADVIHLHFPNPLADLALLLLPRKKPV 109 (357)
T ss_pred CceEEEeecccc------cccccccHHHHH----HHH-----h-------cCCCCCEEEEecCcchHHHHHHHhccCceE
Confidence 556666653211 011111111111 000 1 125799999998644333333333368999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
+++.|+.... .. ..+.+.+.+ ++..++.||.|++.|+...+.+..++..
T Consensus 110 i~~~h~~~~~-------~~-------~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~~~~~~--------------- 158 (357)
T cd03795 110 VVHWHSDIVK-------QK-------LLLKLYRPL--QRRFLRRADAIVATSPNYAETSPVLRRF--------------- 158 (357)
T ss_pred EEEEcChhhc-------cc-------hhhhhhhHH--HHHHHHhcCEEEeCcHHHHHHHHHhcCC---------------
Confidence 9999964211 00 011122222 4557899999999998877654333211
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
..++.+||||+|...+.+... . .........+.+.|+++||+.+.|
T Consensus 159 --------~~~~~~i~~gi~~~~~~~~~~---------------------~-----~~~~~~~~~~~~~i~~~G~~~~~K 204 (357)
T cd03795 159 --------RDKVRVIPLGLDPARYPRPDA---------------------L-----EEAIWRRAAGRPFFLFVGRLVYYK 204 (357)
T ss_pred --------ccceEEecCCCChhhcCCcch---------------------h-----hhHhhcCCCCCcEEEEeccccccc
Confidence 128999999999987754331 0 001112235678999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++|+.++. ++.+ ++|+++. ...+.+.+.+++...+|.|+|+++++++..+|+.|
T Consensus 205 ~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a--- 264 (357)
T cd03795 205 GLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC--- 264 (357)
T ss_pred CHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC---
Confidence 9999999999883 4444 7787653 34566777888999999999999999999999999
Q ss_pred CcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc-CCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001705 570 KGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA-LNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646 (1024)
Q Consensus 570 ~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 646 (1024)
|++++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++++++.++++++++
T Consensus 265 -d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~ 343 (357)
T cd03795 265 -DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAA 343 (357)
T ss_pred -CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 99999986 59999999999999999999999999998886 899999999999999999999999999999999999
Q ss_pred HHHH-hcCCHHHHH
Q 001705 647 LKNI-HRFSWPEHC 659 (1024)
Q Consensus 647 ~~~~-~~fsw~~~a 659 (1024)
++.+ ++|||+.++
T Consensus 344 ~~~~~~~~s~~~~~ 357 (357)
T cd03795 344 RERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHhcchHhhC
Confidence 9999 799998763
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.8e-32 Score=306.21 Aligned_cols=361 Identities=23% Similarity=0.261 Sum_probs=260.3
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. ++ |..||.+.++..|+++|.++| |+|++++.....+.... . .
T Consensus 1 kIl~i~~~---------~~--p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~---~--------------~ 50 (364)
T cd03814 1 RIAIVTDT---------FL--PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEGP---A--------------R 50 (364)
T ss_pred CeEEEecc---------cC--ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccCC---C--------------C
Confidence 68999966 33 556999999999999999999 99999998743211000 0 1
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ip 329 (1024)
...+...+.... ...... +.. ...+.+.+.+ .+||+||+|.. ..+..+..+++..++|
T Consensus 51 ~~~~~~~~~~~~----~~~~~~--~~~--------~~~~~~~~~~-------~~pdii~~~~~~~~~~~~~~~~~~~~~~ 109 (364)
T cd03814 51 VVPVPSVPLPGY----PEIRLA--LPP--------RRRVRRLLDA-------FAPDVVHIATPGPLGLAALRAARRLGIP 109 (364)
T ss_pred ceeecccccCcc----cceEec--ccc--------hhhHHHHHHh-------cCCCEEEEeccchhhHHHHHHHHHcCCC
Confidence 222222221111 000000 000 0111111111 57999999875 3456666777778999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+.+........ . . ....+... .++..++.+|.+++.|....+.+...+.
T Consensus 110 ~i~~~~~~~~~~~~~~~-----~-~--~~~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~~--------------- 164 (364)
T cd03814 110 VVTSYHTDFPEYLRYYG-----L-G--PLSWLAWA--YLRWFHNRADRVLVPSPSLADELRARGF--------------- 164 (364)
T ss_pred EEEEEecChHHHhhhcc-----c-c--hHhHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccCC---------------
Confidence 99999986543221110 0 0 01111111 2455688999999999987764322211
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.++|+|+|.+.|.+... + .....++. .++++.|+++||+.+.
T Consensus 165 ----------~~~~~~~~g~~~~~~~~~~~----------------------~--~~~~~~~~-~~~~~~i~~~G~~~~~ 209 (364)
T cd03814 165 ----------RRVRLWPRGVDTELFHPRRR----------------------D--EALRARLG-PPDRPVLLYVGRLAPE 209 (364)
T ss_pred ----------CceeecCCCccccccCcccc----------------------c--HHHHHHhC-CCCCeEEEEEeccccc
Confidence 27899999999988765431 0 00111121 3557899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. . +++.+ ++|.+++.+. +. +...+|.|.|+++.+++..+|+.|
T Consensus 210 k~~~~~i~~~~~l~~--~-~~~~l~i~G~~~~~~~-----------~~------~~~~~v~~~g~~~~~~~~~~~~~~-- 267 (364)
T cd03814 210 KNLEALLDADLPLRR--R-PPVRLVIVGDGPARAR-----------LE------ARYPNVHFLGFLDGEELAAAYASA-- 267 (364)
T ss_pred cCHHHHHHHHHHhhh--c-CCceEEEEeCCchHHH-----------Hh------ccCCcEEEEeccCHHHHHHHHHhC--
Confidence 999999999999964 2 55665 7787664222 11 456789999999999999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++++++.+.++++++++
T Consensus 268 --d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 345 (364)
T cd03814 268 --DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARA 345 (364)
T ss_pred --CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 001705 649 NIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 649 ~~~~fsw~~~a~~~l~~~ 666 (1024)
.+++|+|+.+++++++.|
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 998999999999999887
No 43
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.2e-31 Score=311.65 Aligned_cols=410 Identities=16% Similarity=0.141 Sum_probs=274.6
Q ss_pred cccccccCCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCce--EEEEEecCCCCCCCCcccCCC
Q 001705 159 IWSEDDKSSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVY--RVDLLTRQIASPEVDSSYGEP 236 (1024)
Q Consensus 159 ~~~~~~~~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~--~V~vlt~~~~~p~~~~~y~~~ 236 (1024)
+|-... ..++++|+|+.++ +| ..||.++.+++.+++|.+.| + .|.++|... |+.- .+.
T Consensus 24 ~~~~~~-~~~~~~v~f~HP~---------~~---~ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~-d~~~----~~~ 83 (463)
T PLN02949 24 SVLRAR-RSRKRAVGFFHPY---------TN---DGGGGERVLWCAVRAIQEEN--PDLDCVIYTGDH-DASP----DSL 83 (463)
T ss_pred HHHhcc-cCCCcEEEEECCC---------CC---CCCChhhHHHHHHHHHHhhC--CCCeEEEEcCCC-CCCH----HHH
Confidence 344455 5677899999876 32 45699999999999999998 6 888888763 2211 010
Q ss_pred ccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-h
Q 001705 237 NEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD-A 315 (1024)
Q Consensus 237 ~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~-~ 315 (1024)
.................++++..+ .++ ...+||++.-+.+.+-..... .+++.. ..|| |++.... +
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~~~---~~~-~~~~~~~~t~~~~~~~~~~l~-~~~~~~-------~~p~-v~vDt~~~~ 150 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLRKR---KWI-EEETYPRFTMIGQSLGSVYLA-WEALCK-------FTPL-YFFDTSGYA 150 (463)
T ss_pred HHHHHhhcceecCCCceEEEeccc---ccc-ccccCCceehHHHHHHHHHHH-HHHHHh-------cCCC-EEEeCCCcc
Confidence 000000000011123344444221 344 445788876665433222222 222222 2355 5543321 1
Q ss_pred HHHHHHHHccCCCCEEEEeCCC--chhhhHHHHhcC------------CCCcchhh-HHHHHHHHHHHHHhhhcCCEEEe
Q 001705 316 GEVAAHLSGALNVPMVLTGHSL--GRNKFEQLLKQG------------RLPKDINA-SYKIMRRIEAEELGLDASEMVVT 380 (1024)
Q Consensus 316 ~~~a~~l~~~~~ipiV~t~H~l--~~~~~~~l~~~g------------~~~~~i~~-~y~~~r~i~~e~~~l~~Ad~Vi~ 380 (1024)
..++ ++ +..++|++++.|.- ..+.+....... .+...... .|+.+.. .++...+.||.|++
T Consensus 151 ~~~p-l~-~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~--l~~~~~~~ad~ii~ 226 (463)
T PLN02949 151 FTYP-LA-RLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAW--MYGLVGRCAHLAMV 226 (463)
T ss_pred cHHH-HH-HhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHH--HHHHHcCCCCEEEE
Confidence 1111 22 24489999999942 111111110000 00000111 1122222 36677799999999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
+|+...+.+...+.. ..++.+++||+|.+.+.....
T Consensus 227 nS~~t~~~l~~~~~~-----------------------~~~i~vvyp~vd~~~~~~~~~--------------------- 262 (463)
T PLN02949 227 NSSWTKSHIEALWRI-----------------------PERIKRVYPPCDTSGLQALPL--------------------- 262 (463)
T ss_pred CCHHHHHHHHHHcCC-----------------------CCCeEEEcCCCCHHHcccCCc---------------------
Confidence 998877765443321 127899999999765522110
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc--CCCCcEEE-EEecCCCcccccccchHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPL--RELANMTL-ILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
. ..++++.|+++||+.++||++.+|+||..+.+. ...+++.| |+|++.. .++.++..++++
T Consensus 263 -~----------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~~ 326 (463)
T PLN02949 263 -E----------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLKD 326 (463)
T ss_pred -c----------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHHH
Confidence 0 013467899999999999999999999987431 12356665 7787642 234456788999
Q ss_pred HHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch-hhhcc---CCc
Q 001705 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV-DILKA---LNN 613 (1024)
Q Consensus 538 ~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~-eii~~---~~~ 613 (1024)
+++++++.++|.|+|+++.+++.++|+.| +++|+|+..|+||++++||||||+|||+++.||+. |++.+ +.+
T Consensus 327 la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~t 402 (463)
T PLN02949 327 RAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQT 402 (463)
T ss_pred HHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcc
Confidence 99999999999999999999999999999 89999999999999999999999999999999975 77765 568
Q ss_pred EEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 614 GLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
|++++ |+++++++|.++++ +++.++++++++++.+++|||+..+++|.+.+..+.+
T Consensus 403 G~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 403 GFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred cccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 99985 99999999999999 5788899999999999889999999999999998765
No 44
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=3.3e-31 Score=300.23 Aligned_cols=331 Identities=20% Similarity=0.224 Sum_probs=234.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++|+.... + .| ++..||.++++.+|+++|.+.| |+|++++.......
T Consensus 1 MkI~~i~~~~~----~--~~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~--------------------- 50 (335)
T cd03802 1 MRIALVAPPRE----P--VP-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTA--------------------- 50 (335)
T ss_pred CeEEEEcCCcc----c--CC-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCcc---------------------
Confidence 89999997633 0 12 4678999999999999999999 99999997632110
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
.......... ..... + ............+.+.+.+ .+||+||+|.+..... +++..++|
T Consensus 51 --~~~~~~~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~~~~~~~ 109 (335)
T cd03802 51 --APLVPVVPEP--LRLDA---P----GRDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FARPLPVP 109 (335)
T ss_pred --cceeeccCCC--ccccc---c----hhhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hhcccCCC
Confidence 0011111000 00000 0 0000111111222222222 4799999998865554 45667899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+|++.|+...... .. .......++.+++.|+...+.....
T Consensus 110 ~v~~~h~~~~~~~-------------~~----------~~~~~~~~~~~~~~s~~~~~~~~~~----------------- 149 (335)
T cd03802 110 VVTTLHGPPDPEL-------------LK----------LYYAARPDVPFVSISDAQRRPWPPL----------------- 149 (335)
T ss_pred EEEEecCCCCccc-------------ch----------HHHhhCcCCeEEEecHHHHhhcccc-----------------
Confidence 9999997633211 00 1123567788888887665532110
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.+||||+|++.|.+.. .+++.|+++||+.+.
T Consensus 150 ----------~~~~vi~ngvd~~~~~~~~------------------------------------~~~~~i~~~Gr~~~~ 183 (335)
T cd03802 150 ----------PWVATVHNGIDLDDYPFRG------------------------------------PKGDYLLFLGRISPE 183 (335)
T ss_pred ----------cccEEecCCcChhhCCCCC------------------------------------CCCCEEEEEEeeccc
Confidence 2899999999998875422 346789999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcC-CCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYD-LYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~-l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
||++.+++++... ++.| ++|.++..+. +........ +.++|.|+|+++.+++..+|+.|
T Consensus 184 Kg~~~li~~~~~~-------~~~l~i~G~~~~~~~-----------~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~- 244 (335)
T cd03802 184 KGPHLAIRAARRA-------GIPLKLAGPVSDPDY-----------FYREIAPELLDGPDIEYLGEVGGAEKAELLGNA- 244 (335)
T ss_pred cCHHHHHHHHHhc-------CCeEEEEeCCCCHHH-----------HHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC-
Confidence 9999999998654 2334 7788764222 222333322 56789999999999999999999
Q ss_pred cCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001705 568 KTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNG 646 (1024)
Q Consensus 568 ~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 646 (1024)
|++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+ .+++
T Consensus 245 ---d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~~ 313 (335)
T cd03802 245 ---RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD------RAAC 313 (335)
T ss_pred ---cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH------HHHH
Confidence 99999997 59999999999999999999999999999999889999985 999999999987653 2345
Q ss_pred HHHH-hcCCHHHHHHHHHHHHH
Q 001705 647 LKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 647 ~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
++.+ ++|||+..+++|+++|+
T Consensus 314 ~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 314 RRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 6666 79999999999999873
No 45
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=3.5e-31 Score=301.51 Aligned_cols=370 Identities=23% Similarity=0.252 Sum_probs=257.5
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.+ ++ +..||.++++.+|+++|++.| |+|++++........ ... ..
T Consensus 1 kIl~i~~~---------~~--~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~------~~~----------~~ 51 (375)
T cd03821 1 KILHVIPS---------FD--PKYGGPVRVVLNLSKALAKLG--HEVTVATTDAGGDPL------LVA----------LN 51 (375)
T ss_pred CeEEEcCC---------CC--cccCCeehHHHHHHHHHHhcC--CcEEEEecCCCCccc------hhh----------cc
Confidence 68899866 33 678999999999999999999 999999876432110 000 00
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC--ChHHHHHHHHccCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA--DAGEVAAHLSGALNV 328 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~--~~~~~a~~l~~~~~i 328 (1024)
......... .. ..... ..+.. +. .. +...+.. ...+||+||+|.. .....+..+.+..++
T Consensus 52 ~~~~~~~~~-~~-~~~~~-~~~~~---~~-----~~--~~~~~~~-----~~~~~dii~~~~~~~~~~~~~~~~~~~~~~ 113 (375)
T cd03821 52 GVPVKLFSI-NV-AYGLN-LARYL---FP-----PS--LLAWLRL-----NIREADIVHVHGLWSYPSLAAARAARKYGI 113 (375)
T ss_pred Cceeeeccc-ch-hhhhh-hhhhc---cC-----hh--HHHHHHH-----hCCCCCEEEEecccchHHHHHHHHHHHhCC
Confidence 100000000 00 00000 00000 00 00 0000000 0147999999973 344555556666799
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|++++.|+....... .... ..........+...+..++.+++++......+...+
T Consensus 114 ~~i~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~--------------- 168 (375)
T cd03821 114 PYVVSPHGMLDPWAL-------PHKA---LKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG--------------- 168 (375)
T ss_pred CEEEEcccccccccc-------ccch---hhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhC---------------
Confidence 999999976332210 0000 111112223356678899999999976665543221
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
+..++.+||||+|.+.+.+... . .....+....++++|+++||+.+
T Consensus 169 ---------~~~~~~vi~~~~~~~~~~~~~~----------------------~---~~~~~~~~~~~~~~i~~~G~~~~ 214 (375)
T cd03821 169 ---------LKAPIAVIPNGVDIPPFAALPS----------------------R---GRRRKFPILPDKRIILFLGRLHP 214 (375)
T ss_pred ---------CcccEEEcCCCcChhccCcchh----------------------h---hhhhhccCCCCCcEEEEEeCcch
Confidence 1138999999999987754431 0 00112223467889999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
.||++.+++|+..+.+ +.+++.+ ++|.++.. ....+..++.++++.++|.|+|+++.+++..+|+.|
T Consensus 215 ~K~~~~li~a~~~l~~--~~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a- 282 (375)
T cd03821 215 KKGLDLLIEAFAKLAE--RFPDWHLVIAGPDEGG---------YRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADA- 282 (375)
T ss_pred hcCHHHHHHHHHHhhh--hcCCeEEEEECCCCcc---------hHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhC-
Confidence 9999999999999863 3466666 77765431 234445556888999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++||||||+|||+++.||..+++.+ ..|+++++ +.++++++|.+++++++.+++++++++
T Consensus 283 ---dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~ 357 (375)
T cd03821 283 ---DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENGR 357 (375)
T ss_pred ---CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 78888865 569999999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l 663 (1024)
+.+ ++|||+..+++|+
T Consensus 358 ~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 358 ALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHhcCHHHHHHHhh
Confidence 996 7999999999886
No 46
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=5.9e-31 Score=308.29 Aligned_cols=372 Identities=16% Similarity=0.176 Sum_probs=253.8
Q ss_pred CCChHHHHHHHHHHHHHcC--CCceEEEEEecCCCCCC-CCc-ccCCCccccCCCCCCCCCCCeEEEEec-CCCCCCccc
Q 001705 193 DTGGQVKYVVELARALANT--EGVYRVDLLTRQIASPE-VDS-SYGEPNEMLSCPSDGTGSCGAYIIRIP-CGARDKYIA 267 (1024)
Q Consensus 193 ~~GG~~~~v~~La~aLa~~--g~v~~V~vlt~~~~~p~-~~~-~y~~~~e~l~~~~~~~~~~gv~i~rip-~~~~~~~~~ 267 (1024)
..||.++.+++.+.+|.+. + |+|+|+|....... ... .....++ .+..+++.++++. .+ .++
T Consensus 12 ~ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~~~~l~~~~~~f~-------~~~~~~~~~~~~~~~~---~~~- 78 (419)
T cd03806 12 AGGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATPEEILEKVESRFN-------IELDRPRIVFFLLKYR---KLV- 78 (419)
T ss_pred CCCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCHHHHHHHHHHhcC-------eecCCCceEEEEecce---eee-
Confidence 3569999999999999998 6 99999999853211 000 0000010 0233577766663 21 222
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CCh-HHHHHHHHccCCCCEEEEeCCCch----hh
Q 001705 268 KESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY-ADA-GEVAAHLSGALNVPMVLTGHSLGR----NK 341 (1024)
Q Consensus 268 k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~-~~~-~~~a~~l~~~~~ipiV~t~H~l~~----~~ 341 (1024)
....|+.+..+.+.+......+. .+.. .+||||..|. +.. ..++.++. ++|+|+.+| ++ +.
T Consensus 79 ~~~~~~r~~~~~~~~~~~~~~~~-~~~~-------~~pDv~i~~~g~~~~~~~~~~~~---~~~~i~y~h--~P~~~~d~ 145 (419)
T cd03806 79 EASTYPRFTLLGQALGSMILGLE-ALLK-------LVPDIFIDTMGYPFTYPLVRLLG---GCPVGAYVH--YPTISTDM 145 (419)
T ss_pred ccccCCceeeHHHHHHHHHHHHH-HHHh-------cCCCEEEEcCCcccHHHHHHHhc---CCeEEEEec--CCcchHHH
Confidence 23467776555444433333222 1111 3699988775 333 33333223 789999999 34 33
Q ss_pred hHHHHhcCC--------CCc-c----hhh-HHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 342 FEQLLKQGR--------LPK-D----INA-SYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 342 ~~~l~~~g~--------~~~-~----i~~-~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
+..+ ..+. ..+ . +.. .|+++.. .|+..++.||.|+++|+...+.+...+..
T Consensus 146 l~~~-~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~------------ 210 (419)
T cd03806 146 LQKV-RSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKR------------ 210 (419)
T ss_pred HHHH-hhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCc------------
Confidence 3221 1111 000 1 111 1122222 47888999999999998777765443321
Q ss_pred hhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
..++.|||||+|.+.|.+... ....++++|+++||+.
T Consensus 211 -----------~~~~~vi~~gvd~~~~~~~~~--------------------------------~~~~~~~~il~vgr~~ 247 (419)
T cd03806 211 -----------NTKPSIVYPPCDVEELLKLPL--------------------------------DEKTRENQILSIAQFR 247 (419)
T ss_pred -----------CCCcEEEcCCCCHHHhccccc--------------------------------ccccCCcEEEEEEeec
Confidence 027899999999877643320 0124567999999999
Q ss_pred CCCCHHHHHHHHhhccccCCC---CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHH
Q 001705 488 PKKNVTTLLKAFGECQPLREL---ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIY 563 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~---~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly 563 (1024)
+.||++.+++||..+.+..+. +++.| |+|++.. .+..++..+++++++++++.++|.|+|.++.+++..+|
T Consensus 248 ~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~-----~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l 322 (419)
T cd03806 248 PEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN-----EDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEEL 322 (419)
T ss_pred CCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC-----cccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHH
Confidence 999999999999998642222 34665 6776543 22345778899999999999999999999999999999
Q ss_pred HHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhc---cCCcEEEeCCCCHHHHHHHHHHHHhCHHHH
Q 001705 564 RLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP-VDILK---ALNNGLLVDPHDQNAIADALLKLLADKNMW 639 (1024)
Q Consensus 564 ~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~-~eii~---~~~~Gllv~p~d~~~la~aI~~ll~d~~~~ 639 (1024)
+.| |++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|++|.+++++++..
T Consensus 323 ~~a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~ 396 (419)
T cd03806 323 STA----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEE 396 (419)
T ss_pred HhC----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHH
Confidence 999 9999999999999999999999999999999886 57887 789999985 9999999999999976554
Q ss_pred HHHHHHHHHHH-hcCCHHHHH
Q 001705 640 SECRKNGLKNI-HRFSWPEHC 659 (1024)
Q Consensus 640 ~~~~~~~~~~~-~~fsw~~~a 659 (1024)
+++..++++.+ ++|||+...
T Consensus 397 ~~~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 397 RLRIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHHHHhhCHHHhc
Confidence 44445555555 799999764
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=7.1e-31 Score=300.35 Aligned_cols=385 Identities=22% Similarity=0.283 Sum_probs=271.0
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. ++ +..||.+.++..|+++|+++| |+|++++.....+.......... ...+
T Consensus 1 kIl~i~~~---------~~--~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~~~~---------~~~~ 58 (394)
T cd03794 1 KILILSQY---------FP--PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKGYKR---------EEVD 58 (394)
T ss_pred CEEEEecc---------cC--CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCcccccccccceE---------EecC
Confidence 68999966 33 445899999999999999999 99999998654332110000000 1235
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC--ChHHHHHHHHccCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA--DAGEVAAHLSGALNV 328 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~--~~~~~a~~l~~~~~i 328 (1024)
++.+++++..... ....+..+..+.... ......+.. ...+||+||+|.+ .....+..+++..++
T Consensus 59 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~ 125 (394)
T cd03794 59 GVRVHRVPLPPYK----KNGLLKRLLNYLSFA----LSALLALLK-----RRRRPDVIIATSPPLLIALAALLLARLKGA 125 (394)
T ss_pred CeEEEEEecCCCC----ccchHHHHHhhhHHH----HHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHHHHhcCC
Confidence 8888888864331 100101011111111 111111110 1257999999973 345555666666799
Q ss_pred CEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhh
Q 001705 329 PMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRR 408 (1024)
Q Consensus 329 piV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~ 408 (1024)
|++++.|++++...... +.... ....+.+.+.+ ++..++.+|.|+++|+...+.+.. +
T Consensus 126 ~~i~~~h~~~~~~~~~~---~~~~~-~~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~~-~--------------- 183 (394)
T cd03794 126 PFVLEVRDLWPESAVAL---GLLKN-GSLLYRLLRKL--ERLIYRRADAIVVISPGMREYLVR-R--------------- 183 (394)
T ss_pred CEEEEehhhcchhHHHc---cCccc-cchHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHHh-c---------------
Confidence 99999999866544322 11111 11112333333 677899999999999988776431 1
Q ss_pred hcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC
Q 001705 409 QRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP 488 (1024)
Q Consensus 409 ~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~ 488 (1024)
+....++.++|||+|...+.+... +. ...+.....+++.|+++|++.+
T Consensus 184 -------~~~~~~~~~i~~~~~~~~~~~~~~----------------------~~---~~~~~~~~~~~~~i~~~G~~~~ 231 (394)
T cd03794 184 -------GVPPEKISVIPNGVDLELFKPPPA----------------------DE---SLRKELGLDDKFVVLYAGNIGR 231 (394)
T ss_pred -------CCCcCceEEcCCCCCHHHcCCccc----------------------hh---hhhhccCCCCcEEEEEecCccc
Confidence 112238999999999877654431 00 0112223456789999999999
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
.||++.+++|+..+.+. +++.+ ++|+++.. ..+.+.+...++ ++|.|.|+++.+++.++|+.|
T Consensus 232 ~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~- 295 (394)
T cd03794 232 AQGLDTLLEAAALLKDR---PDIRFLIVGDGPEK-----------EELKELAKALGL-DNVTFLGRVPKEELPELLAAA- 295 (394)
T ss_pred ccCHHHHHHHHHHHhhc---CCeEEEEeCCcccH-----------HHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHhh-
Confidence 99999999999998542 56666 77877642 334444555555 579999999999999999999
Q ss_pred cCCcEEEecCCCCCC-----CHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001705 568 KTKGVFINPALVEPF-----GLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egf-----gl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
|++++|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.++++
T Consensus 296 ---di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 372 (394)
T cd03794 296 ---DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEM 372 (394)
T ss_pred ---CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHH
Confidence 999999998876 788999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCHHHHHHHHH
Q 001705 643 RKNGLKNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 643 ~~~~~~~~-~~fsw~~~a~~~l 663 (1024)
++++++.+ ++|||+.++++|+
T Consensus 373 ~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 373 GENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHhhcHHHHHHhcC
Confidence 99999999 5999999998873
No 48
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=5.6e-31 Score=300.33 Aligned_cols=345 Identities=21% Similarity=0.271 Sum_probs=254.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.+ +| +|.+.++++++++|.++| |+|+|+|.......... .
T Consensus 1 ki~~~~~~---------~~-----~~~~~~~~~~~~~L~~~g--~~v~v~~~~~~~~~~~~------~------------ 46 (355)
T cd03799 1 KIAYLVKE---------FP-----RLSETFILREILALEAAG--HEVEIFSLRPPEDTLVH------P------------ 46 (355)
T ss_pred CEEEECCC---------CC-----CcchHHHHHHHHHHHhCC--CeEEEEEecCccccccc------c------------
Confidence 69999977 44 236789999999999999 99999997632111000 0
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-hHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD-AGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~-~~~~a~~l~~~~~ip 329 (1024)
. ....+. .. .+. ...|. .......+.+.+.+ .+||+||+|+.. ...++.+.++..++|
T Consensus 47 ~--~~~~~~-~~-~~~--------~~~~~--~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~ 105 (355)
T cd03799 47 E--DRAELA-RT-RYL--------ARSLA--LLAQALVLARELRR-------LGIDHIHAHFGTTPATVAMLASRLGGIP 105 (355)
T ss_pred c--cccccc-ch-HHH--------HHHHH--HHHHHHHHHHHHHh-------cCCCEEEECCCCchHHHHHHHHHhcCCC
Confidence 0 000000 00 111 00111 01111122222222 479999999874 444455555555899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+..... .... ..++..++.+|.+++.|+...+.+...+.
T Consensus 106 ~~~~~~~~~~~~------------~~~~--------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~--------------- 150 (355)
T cd03799 106 YSFTAHGKDIFR------------SPDA--------IDLDEKLARADFVVAISEYNRQQLIRLLG--------------- 150 (355)
T ss_pred EEEEEecccccc------------cCch--------HHHHHHHhhCCEEEECCHHHHHHHHHhcC---------------
Confidence 999999642110 0000 12455688999999999988887655431
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
....++.++|||+|.+.+.+... ....+++.|+++|++.+.
T Consensus 151 -------~~~~~~~vi~~~~d~~~~~~~~~--------------------------------~~~~~~~~i~~~g~~~~~ 191 (355)
T cd03799 151 -------CDPDKIHVVHCGVDLERFPPRPP--------------------------------PPPGEPLRILSVGRLVEK 191 (355)
T ss_pred -------CCcccEEEEeCCcCHHHcCCccc--------------------------------cccCCCeEEEEEeeeccc
Confidence 12238999999999877643320 012456789999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. ..+++.+ ++|.++. ...+...+.++++.++|.|.|+++.+++..+|+.|
T Consensus 192 k~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a-- 256 (355)
T cd03799 192 KGLDYLLEALALLKD--RGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA-- 256 (355)
T ss_pred cCHHHHHHHHHHHhh--cCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhC--
Confidence 999999999999853 3466776 7787764 34566778888898999999999999999999999
Q ss_pred CCcEEEecCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001705 569 TKGVFINPALV------EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 569 ~~dv~v~ps~~------Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
|++++|+.. |+||++++||||||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++++++.+.++
T Consensus 257 --di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 334 (355)
T cd03799 257 --DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREM 334 (355)
T ss_pred --CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 999999998 999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCHHHHHHH
Q 001705 643 RKNGLKNI-HRFSWPEHCRN 661 (1024)
Q Consensus 643 ~~~~~~~~-~~fsw~~~a~~ 661 (1024)
++++++.+ ++|||+..+++
T Consensus 335 ~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 335 GEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHhcCHHHHhhc
Confidence 99999998 69999998865
No 49
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=2.6e-31 Score=305.71 Aligned_cols=347 Identities=16% Similarity=0.202 Sum_probs=245.3
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCceEEEEEecCCCCCCCCcccCCCccccCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANT--EGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~--g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~ 247 (1024)
|||++++.. + +..||+++++.+|+++|.+. | ++|.++++..... ...+
T Consensus 1 mkI~~~~~~---------~---~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~~---------~~~~------- 50 (359)
T PRK09922 1 MKIAFIGEA---------V---SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKMD---------KAWL------- 50 (359)
T ss_pred CeeEEeccc---------c---cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCCC---------hHHH-------
Confidence 899999865 2 34699999999999999999 7 9999998753210 0000
Q ss_pred CCCCeEE-EEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC
Q 001705 248 GSCGAYI-IRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 248 ~~~gv~i-~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
..+.+ ..++..+. .. ++ . ..+...+.+.+.+ .+||+||+|......++.++++..
T Consensus 51 --~~~~~~~~~~~~~~-~~-----~~----~-----~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~~~~~~~ 106 (359)
T PRK09922 51 --KEIKYAQSFSNIKL-SF-----LR----R-----AKHVYNFSKWLKE-------TQPDIVICIDVISCLYANKARKKS 106 (359)
T ss_pred --Hhcchhcccccchh-hh-----hc----c-----cHHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHHHHHHHh
Confidence 01110 01110000 00 00 0 0111222233322 579999999876666667666666
Q ss_pred CCC--EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 327 NVP--MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 327 ~ip--iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
++| ++.+.|...... ..+. ...+..+|.+++.|+...+.+... +..
T Consensus 107 ~~~~~~~~~~h~~~~~~---------------~~~~--------~~~~~~~d~~i~~S~~~~~~~~~~--~~~------- 154 (359)
T PRK09922 107 GKQFKIFSWPHFSLDHK---------------KHAE--------CKKITCADYHLAISSGIKEQMMAR--GIS------- 154 (359)
T ss_pred CCCCeEEEEecCccccc---------------chhh--------hhhhhcCCEEEEcCHHHHHHHHHc--CCC-------
Confidence 654 566667421100 0000 011368999999998776665331 111
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg 484 (1024)
..++.+||||+|.+.+.... + ...+++.|+++|
T Consensus 155 --------------~~ki~vi~N~id~~~~~~~~-----------------------~----------~~~~~~~i~~~G 187 (359)
T PRK09922 155 --------------AQRISVIYNPVEIKTIIIPP-----------------------P----------ERDKPAVFLYVG 187 (359)
T ss_pred --------------HHHEEEEcCCCCHHHccCCC-----------------------c----------ccCCCcEEEEEE
Confidence 12899999999965442111 0 013467899999
Q ss_pred CCC--CCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC--CCH
Q 001705 485 RPD--PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ--SDV 559 (1024)
Q Consensus 485 Rld--~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~--~el 559 (1024)
|+. +.||+..+++|+..+. + ++.+ ++|++++ ...+.++++++++.++|.|+|+++. +++
T Consensus 188 rl~~~~~k~~~~l~~a~~~~~---~--~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 188 RLKFEGQKNVKELFDGLSQTT---G--EWQLHIIGDGSD-----------FEKCKAYSRELGIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred EEecccCcCHHHHHHHHHhhC---C--CeEEEEEeCCcc-----------HHHHHHHHHHcCCCCeEEEecccCCcHHHH
Confidence 986 4599999999998873 2 4554 7888865 3456788899999999999999754 678
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHH
Q 001705 560 PDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
.++|+.| |++|+||.+||||++++||||||+|||+|+ .||+.|++.++.+|++++|+|+++++++|.+++++++.
T Consensus 252 ~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 252 QQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred HHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 9999999 999999999999999999999999999999 89999999999999999999999999999999999975
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 639 WSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 639 ~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
+ ......+.+.+|+-+..++++...|..+++
T Consensus 328 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 328 Y--QHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred C--CHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 4 233334445789999999999999987764
No 50
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.1e-30 Score=297.75 Aligned_cols=371 Identities=23% Similarity=0.327 Sum_probs=262.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ++ |..||.+.++.+++++|++.| |+|++++....+..... ...
T Consensus 1 kil~~~~~---------~~--p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~----------------~~~ 51 (374)
T cd03817 1 KIGIFTDT---------YL--PQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE----------------EVV 51 (374)
T ss_pred CeeEeehh---------cc--CCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc----------------ccc
Confidence 58888865 33 789999999999999999999 99999988643221100 000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ip 329 (1024)
+....+.+.. . .....+.+ .+. ..+...+.+ .+||+||+|+. ..+..+..+++..++|
T Consensus 52 ~~~~~~~~~~---~--~~~~~~~~--~~~-------~~~~~~~~~-------~~~Div~~~~~~~~~~~~~~~~~~~~~~ 110 (374)
T cd03817 52 VVRPFRVPTF---K--YPDFRLPL--PIP-------RALIIILKE-------LGPDIVHTHTPFSLGLLGLRVARKLGIP 110 (374)
T ss_pred cccccccccc---h--hhhhhccc--cHH-------HHHHHHHhh-------cCCCEEEECCchhhhhHHHHHHHHcCCC
Confidence 1111111100 0 00000000 010 111111111 57999999986 3455666777788999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+.......... .+.. ... .... ...++..+..||.|++.|....+.+.....
T Consensus 111 ~i~~~~~~~~~~~~~~~-~~~~---~~~--~~~~-~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--------------- 168 (374)
T cd03817 111 VVATYHTMYEDYTHYVP-LGRL---LAR--AVVR-RKLSRRFYNRCDAVIAPSEKIADLLREYGV--------------- 168 (374)
T ss_pred EEEEecCCHHHHHHHHh-cccc---hhH--HHHH-HHHHHHHhhhCCEEEeccHHHHHHHHhcCC---------------
Confidence 99999987553322221 1111 100 0111 034677889999999999876665433211
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
..++.++|+|+|...+.+... ......+...++++.|+++|++.+.
T Consensus 169 ---------~~~~~vi~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~G~~~~~ 214 (374)
T cd03817 169 ---------KRPIEVIPTGIDLDRFEPVDG-------------------------DDERRKLGIPEDEPVLLYVGRLAKE 214 (374)
T ss_pred ---------CCceEEcCCccchhccCccch-------------------------hHHHHhcCCCCCCeEEEEEeeeecc
Confidence 026899999999887754431 0011222334567899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. ..+++.+ ++|+++. ...+..+++++++.++|.|+|+++.+++..+|+.|
T Consensus 215 k~~~~l~~~~~~~~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a-- 279 (374)
T cd03817 215 KNIDFLIRAFARLLK--EEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA-- 279 (374)
T ss_pred cCHHHHHHHHHHHHH--hCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc--
Confidence 999999999999853 3466666 6777653 34566778888999999999999999999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|++++|+..|+||++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++++
T Consensus 280 --d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~~~ 356 (374)
T cd03817 280 --DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNAEE 356 (374)
T ss_pred --CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888 9999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHH
Q 001705 649 NIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 649 ~~~~fsw~~~a~~~l~~~~~ 668 (1024)
.+++++ +++++.+.|++
T Consensus 357 ~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 357 SAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHH---HHHHHHHHHhc
Confidence 997666 55555555543
No 51
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=3.8e-31 Score=307.75 Aligned_cols=364 Identities=13% Similarity=0.153 Sum_probs=230.0
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
||||+|+.. ++ .||+++.+.+|++.|.+.| |+|+++......+... ...
T Consensus 1 mkil~i~~~---------l~----~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~----------------~~~ 49 (405)
T PRK10125 1 MNILQFNVR---------LA----EGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKES----------------VSH 49 (405)
T ss_pred CeEEEEEee---------ec----CCchhHHHHHHHHHHHhcC--CeEEEEEecCCCcccc----------------ccc
Confidence 899999965 34 6999999999999999999 9999988763322200 000
Q ss_pred CCe-EEEEecCCCCCCccccccCCcchHHH-----HHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHH-----
Q 001705 250 CGA-YIIRIPCGARDKYIAKESLWPYIHEF-----VDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEV----- 318 (1024)
Q Consensus 250 ~gv-~i~rip~~~~~~~~~k~~lwp~~~~f-----~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~----- 318 (1024)
..+ .++++ +++ .--+++-+ -...+.......+.+.+ .++|||||.|..+.+++
T Consensus 50 ~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~~~~l 113 (405)
T PRK10125 50 QNYPQVIKH--TPR--------MTAMANIALFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLNLKSV 113 (405)
T ss_pred CCcceEEEe--ccc--------HHHHHHHHHHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceecHHHH
Confidence 111 11111 111 00001111 00111111222222211 26899999998754322
Q ss_pred HHH----HHccCCCCEEEEeCCCchh-----------hhHHHHhcCC----CCc-chhhHHHHH-HHHHHHHHhhhcCCE
Q 001705 319 AAH----LSGALNVPMVLTGHSLGRN-----------KFEQLLKQGR----LPK-DINASYKIM-RRIEAEELGLDASEM 377 (1024)
Q Consensus 319 a~~----l~~~~~ipiV~t~H~l~~~-----------~~~~l~~~g~----~~~-~i~~~y~~~-r~i~~e~~~l~~Ad~ 377 (1024)
..+ ..+..++|+|+|+|+.+.- ++..-...-. .+. ......+.+ ++...-..+++.++.
T Consensus 114 ~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~ 193 (405)
T PRK10125 114 VRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQ 193 (405)
T ss_pred HHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcE
Confidence 111 1234579999999998743 1111010000 000 011111111 111111233456789
Q ss_pred EEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccc
Q 001705 378 VVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQS 457 (1024)
Q Consensus 378 Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 457 (1024)
+|+.|+...+.+...+.. .++.|||||||++.+.+...
T Consensus 194 iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~------------------ 231 (405)
T PRK10125 194 FISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAE------------------ 231 (405)
T ss_pred EEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccc------------------
Confidence 999998777764433221 28999999999754322110
Q ss_pred cCCCCcchHHHhhhhCCCCCcEEEEEeCC--CCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHH
Q 001705 458 KRNLPPMWSEVMRFFTNPHKPTILALSRP--DPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTT 534 (1024)
Q Consensus 458 ~~~~p~~~~~~~~~~~~~~~~~Il~vgRl--d~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~ 534 (1024)
.... ...+++++|+++|+. ++.||++.+++|+..+. +++.| ++|.++...
T Consensus 232 -~~~~---------~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~g~~~~------------ 284 (405)
T PRK10125 232 -LPPV---------RETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGKFSPFT------------ 284 (405)
T ss_pred -cccc---------ccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcCCCccc------------
Confidence 0000 012567899999994 47899999999999873 34555 678764210
Q ss_pred HHHHHHHcCCCCCEEeCCCC-CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCc
Q 001705 535 VLKLIDKYDLYGQVAYPKHH-KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 535 i~~~i~~~~l~~~V~~~g~~-~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~ 613 (1024)
...|.++|+. +.+++.++|+.| |+||+||.+|+||++++||||||+|||+|+.||.+|++.+. +
T Consensus 285 ----------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~ 349 (405)
T PRK10125 285 ----------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-G 349 (405)
T ss_pred ----------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-c
Confidence 1357788875 446899999999 99999999999999999999999999999999999999764 8
Q ss_pred EEEeCCCCHHHHHHHHHHHHhCHHHHHH----HHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 614 GLLVDPHDQNAIADALLKLLADKNMWSE----CRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~d~~~~~~----~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
|++|+|.|++++|+++ +++..++ ...++++.+ ++|||+.++++|+++|+++
T Consensus 350 G~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 350 GKTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EEEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999999999999864 3333332 234577776 6899999999999999753
No 52
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=100.00 E-value=7.4e-32 Score=294.01 Aligned_cols=243 Identities=18% Similarity=0.260 Sum_probs=196.3
Q ss_pred EEEEEecCCCCCC---CchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 750 IVIAADCYDSDGN---TTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 750 llIa~DlDGTl~~---~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
++|++|+||||++ .+..+++.+.++++++.++ |+.|++||||++.+++.++.++++ ..|+++||+||+.|+
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~--~~p~~~I~~NGa~I~ 75 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPL--LTPDIWVTSVGSEIY 75 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCC--CCCCEEEEcCCceEE
Confidence 3778999999886 6678999999999999987 999999999999999999998887 458899999999999
Q ss_pred cCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCC
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGF 906 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~ 906 (1024)
++ +....+..|...+...|..+.+......+.. +..+.......+|+++...+........++.+.+...+.
T Consensus 76 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~ 147 (249)
T TIGR01485 76 YG-GAEVPDQHWAEYLSEKWQRDIVVAITDKFEE-------LKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGL 147 (249)
T ss_pred eC-CCCcCCHHHHHHHhcccCHHHHHHHHhcCcc-------cccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCC
Confidence 85 4456788888888888985544444332222 223333345678888876433222235667777776677
Q ss_pred eEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcC-CCceEEecCCCCCChHHHhcc
Q 001705 907 RCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVG-LHKTLILRGSVMYGSEKLLHG 985 (1024)
Q Consensus 907 ~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~-ag~gVaMgna~~NA~~elk~~ 985 (1024)
.+.++.+++. ++||+|+++|||.||++|++++|++++++++| ||+.| | ++||+. ++.+|||+ ||.+++|+.
T Consensus 148 ~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~-GD~~N-D-~~ml~~~~~~~va~~----na~~~~k~~ 219 (249)
T TIGR01485 148 DVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLVC-GDSGN-D-IELFEIGSVRGVIVS----NAQEELLQW 219 (249)
T ss_pred CEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEEE-ECChh-H-HHHHHccCCcEEEEC----CCHHHHHHH
Confidence 7888888886 99999999999999999999999999999998 99999 9 999997 77999999 999999987
Q ss_pred cccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 986 EDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 986 ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
++.. +.+.+ |+|..+.++||+++|++||+
T Consensus 220 ~~~~--------~~~~~-~~~~~~~~~Gi~e~l~~~~~ 248 (249)
T TIGR01485 220 YDEN--------AKDKI-YHASERCAGGIIEAIAHFDL 248 (249)
T ss_pred HHhc--------ccCcE-EEecCCCcHHHHHHHHHcCC
Confidence 6521 12233 58899999999999999986
No 53
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2e-30 Score=303.91 Aligned_cols=391 Identities=15% Similarity=0.128 Sum_probs=254.4
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCC
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~ 247 (1024)
++.+|++++.- .+|.+.++++++++|+++| |+|+|+|.....+. .+. .
T Consensus 2 ~~~~~~~~~~~---------------~~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~~~-------~ 49 (415)
T cd03816 2 KRKRVCVLVLG---------------DIGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------DEI-------L 49 (415)
T ss_pred CccEEEEEEec---------------ccCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------HHH-------h
Confidence 34577777742 2456677789999999999 99999987632111 010 1
Q ss_pred CCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC---hHHHHHHHHc
Q 001705 248 GSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD---AGEVAAHLSG 324 (1024)
Q Consensus 248 ~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~---~~~~a~~l~~ 324 (1024)
...|+.++.++..+. ...+ .+.+-.+...+......+...+.. . .+||+||+|... ...++.++++
T Consensus 50 ~~~~v~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~l~~---~---~~~Dvi~~~~~~~~~~~~~a~~~~~ 118 (415)
T cd03816 50 SNPNITIHPLPPPPQ--RLNK---LPFLLFAPLKVLWQFFSLLWLLYK---L---RPADYILIQNPPSIPTLLIAWLYCL 118 (415)
T ss_pred cCCCEEEEECCCCcc--cccc---chHHHHHHHHHHHHHHHHHHHHHh---c---CCCCEEEEeCCCCchHHHHHHHHHH
Confidence 235899999876431 0000 111111111111112222221211 1 369999998743 2344555666
Q ss_pred cCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 325 ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 325 ~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
..++|+|++.|+++... ...+... ......+++++ |+.+++.||.|+++|+...+.+.. +
T Consensus 119 ~~~~~~V~~~h~~~~~~----~~~~~~~--~~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~----------- 178 (415)
T cd03816 119 LRRTKLIIDWHNYGYTI----LALKLGE--NHPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-F----------- 178 (415)
T ss_pred HhCCeEEEEcCCchHHH----HhcccCC--CCHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-h-----------
Confidence 67999999999875321 1111111 11122334444 677889999999999987776543 1
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhh-hCCCCCcEEEEE
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRF-FTNPHKPTILAL 483 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~Il~v 483 (1024)
|.+..++.|||||. ...|.|............... . ..+.. ....+. ...++.++++++
T Consensus 179 -----------~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~----~---~~~~~-~~~~~~~~~~~~~~vi~~~ 238 (415)
T cd03816 179 -----------NNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAK----T---FLTRE-LRIGAVQLSEERPALLVSS 238 (415)
T ss_pred -----------hccCCCeeecCCCC-HHHceeCcHHHHHHHHHhccc----c---ccccc-cccccceecCCCceEEEEe
Confidence 11224899999994 455655431000000000000 0 00000 000000 112345678899
Q ss_pred eCCCCCCCHHHHHHHHhhcccc----CCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCC
Q 001705 484 SRPDPKKNVTTLLKAFGECQPL----RELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSD 558 (1024)
Q Consensus 484 gRld~~Kgi~~ll~A~~~l~~l----~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~e 558 (1024)
||+.+.||++.+++|+..+.+. ...|++.| |+|+|+. ..++.++++++++.+.+.+.|+++.++
T Consensus 239 grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~ 307 (415)
T cd03816 239 TSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAED 307 (415)
T ss_pred ccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHH
Confidence 9999999999999999998531 12356776 7788764 356778888999987666778999999
Q ss_pred HHHHHHHhhcCCcEEEecC---CCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhC
Q 001705 559 VPDIYRLAAKTKGVFINPA---LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLAD 635 (1024)
Q Consensus 559 l~~ly~~A~~~~dv~v~ps---~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d 635 (1024)
++.+|+.| |++|.|+ ..|+||++++||||||+|||+|+.||..|++.++.+|++++ |+++++++|.++++|
T Consensus 308 ~~~~l~~a----Dv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~ 381 (415)
T cd03816 308 YPKLLASA----DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSN 381 (415)
T ss_pred HHHHHHhC----CEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhc
Confidence 99999999 9998653 34789999999999999999999999999999999999995 899999999999999
Q ss_pred ---HHHHHHHHHHHHHHHhcCCHHHHH
Q 001705 636 ---KNMWSECRKNGLKNIHRFSWPEHC 659 (1024)
Q Consensus 636 ---~~~~~~~~~~~~~~~~~fsw~~~a 659 (1024)
++.+++|++++++.. .++|+.-.
T Consensus 382 ~~~~~~~~~m~~~~~~~~-~~~~~~~~ 407 (415)
T cd03816 382 FPNRGKLNSLKKGAQEES-ELRWDENW 407 (415)
T ss_pred CCCHHHHHHHHHHHHHhh-hcCHHHHH
Confidence 999999999999876 55665443
No 54
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.3e-31 Score=312.54 Aligned_cols=382 Identities=19% Similarity=0.215 Sum_probs=251.5
Q ss_pred EEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCC
Q 001705 172 IVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCG 251 (1024)
Q Consensus 172 Il~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~g 251 (1024)
||+|+.. +|-||+.||.. .+++|+++|++. |+|+|+|......+. .+......+ ...
T Consensus 1 iL~~~~~---------~P~P~~~G~~~-r~~~~~~~L~~~---~~v~l~~~~~~~~~~--~~~~~l~~~--------~~~ 57 (397)
T TIGR03087 1 ILYLVHR---------IPYPPNKGDKI-RSFHLLRHLAAR---HRVHLGTFVDDPEDW--QYAAALRPL--------CEE 57 (397)
T ss_pred CeeecCC---------CCCCCCCCCcE-eHHHHHHHHHhc---CcEEEEEeCCCcccH--HHHHHHHHH--------hhe
Confidence 6788855 56568888855 678999999887 999999986321111 000111111 113
Q ss_pred eEEEEecCCCCCCcccc-ccCC---cchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHH-ccC
Q 001705 252 AYIIRIPCGARDKYIAK-ESLW---PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLS-GAL 326 (1024)
Q Consensus 252 v~i~rip~~~~~~~~~k-~~lw---p~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~-~~~ 326 (1024)
+.++.++. ...++.. ..++ |+...+ .....+.+.+.+.+.. .++|+||++....+. ++. ...
T Consensus 58 ~~~~~~~~--~~~~~~~~~~l~~~~p~~~~~-----~~~~~~~~~l~~~~~~---~~~D~v~~~~~~~~~---~~~~~~~ 124 (397)
T TIGR03087 58 VCVVPLDP--RVARLRSLLGLLTGEPLSLPY-----YRSRRLARWVNALLAA---EPVDAIVVFSSAMAQ---YVTPHVR 124 (397)
T ss_pred eEEeecCc--HHHHHHHHhhhcCCCCCcchh-----hCCHHHHHHHHHHHhh---CCCCEEEEeccccce---ecccccc
Confidence 33333321 1000000 0000 111000 0112233333343333 479999998753322 222 345
Q ss_pred CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHH--HHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 327 NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKI--MRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 327 ~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~--~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
++|+|++.|++....+.++........ ...|+. ......|+.+++.+|.|++.|+.+.+.+...+..
T Consensus 125 ~~p~i~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~--------- 193 (397)
T TIGR03087 125 GVPRIVDFVDVDSDKWLQYARTKRWPL--RWIYRREGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPE--------- 193 (397)
T ss_pred CCCeEeehhhHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCC---------
Confidence 799999999986555544433322211 112221 1122347889999999999999888775443221
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg 484 (1024)
...++.+||||+|.+.|.+... ...+ ..+++++|+|+|
T Consensus 194 -------------~~~~v~vipngvd~~~f~~~~~-------------------~~~~----------~~~~~~~ilf~G 231 (397)
T TIGR03087 194 -------------AAGRITAFPNGVDADFFSPDRD-------------------YPNP----------YPPGKRVLVFTG 231 (397)
T ss_pred -------------CCCCeEEeecccchhhcCCCcc-------------------ccCC----------CCCCCcEEEEEE
Confidence 1138999999999998865431 0000 124568999999
Q ss_pred CCCCCCCHHHHH----HHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCH
Q 001705 485 RPDPKKNVTTLL----KAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDV 559 (1024)
Q Consensus 485 Rld~~Kgi~~ll----~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el 559 (1024)
|+++.||++.++ +++..+. ...|++.+ |+|+++. .. +.++...++|.|+|+++ ++
T Consensus 232 ~l~~~k~~~~l~~~~~~~~~~l~--~~~p~~~l~ivG~g~~------------~~----~~~l~~~~~V~~~G~v~--~~ 291 (397)
T TIGR03087 232 AMDYWPNIDAVVWFAERVFPAVR--ARRPAAEFYIVGAKPS------------PA----VRALAALPGVTVTGSVA--DV 291 (397)
T ss_pred ecCCccCHHHHHHHHHHHHHHHH--HHCCCcEEEEECCCCh------------HH----HHHhccCCCeEEeeecC--CH
Confidence 999999999988 4555553 23466666 7787763 11 23334456799999975 79
Q ss_pred HHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHH
Q 001705 560 PDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
..+|+.| |++|+||. .||||++++||||||+|||+|+.|+. .+....++|+++. .|+++++++|.++++|+++
T Consensus 292 ~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~ 365 (397)
T TIGR03087 292 RPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-ADPADFAAAILALLANPAE 365 (397)
T ss_pred HHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CCHHHHHHHHHHHHcCHHH
Confidence 9999999 99999997 59999999999999999999997643 3333456799996 8999999999999999999
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHH
Q 001705 639 WSECRKNGLKNI-HRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 639 ~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~ 668 (1024)
++++++++++.+ ++|||+.+++++.++|..
T Consensus 366 ~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 366 REELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 999999999998 699999999999998863
No 55
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1.5e-30 Score=297.10 Aligned_cols=355 Identities=21% Similarity=0.242 Sum_probs=249.6
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. .|..||.++++.+|+++|++.| |+|.+++.....+.... . ....
T Consensus 1 kI~~v~~~------------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~------~--------~~~~ 52 (366)
T cd03822 1 RIALVSPY------------PPRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY------G--------GEQE 52 (366)
T ss_pred CeEEecCC------------CCCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC------C--------Cccc
Confidence 68999865 2458999999999999999999 99999987643221000 0 0000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC------hHHHHHHHHc
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD------AGEVAAHLSG 324 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~------~~~~a~~l~~ 324 (1024)
........ .+ ...... .+.+.. .+||+||++.+. .......+..
T Consensus 53 ~~~~~~~~-------------~~---~~~~~~-------~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~ 102 (366)
T cd03822 53 VVRVIVLD-------------NP---LDYRRA-------ARAIRL-------SGPDVVVIQHEYGIFGGEAGLYLLLLLR 102 (366)
T ss_pred ceeeeecC-------------Cc---hhHHHH-------HHHHhh-------cCCCEEEEeeccccccchhhHHHHHHHh
Confidence 11111000 00 000111 111111 479999998742 1222222223
Q ss_pred cCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHH
Q 001705 325 ALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKL 404 (1024)
Q Consensus 325 ~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l 404 (1024)
..++|+|++.|+.... ..... .. ..++..++.+|.|+++|....+.+.... .
T Consensus 103 ~~~~~~i~~~h~~~~~-------------~~~~~---~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~---~------- 154 (366)
T cd03822 103 GLGIPVVVTLHTVLLH-------------EPRPG---DR--ALLRLLLRRADAVIVMSSELLRALLLRA---Y------- 154 (366)
T ss_pred hcCCCEEEEEecCCcc-------------ccchh---hh--HHHHHHHhcCCEEEEeeHHHHHHHHhhc---C-------
Confidence 4789999999986110 00000 11 1245568899999999744444422111 0
Q ss_pred HHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe
Q 001705 405 RVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS 484 (1024)
Q Consensus 405 ~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg 484 (1024)
..++.+||||+|...+.+... ........+++.|+++|
T Consensus 155 --------------~~~~~~i~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~G 192 (366)
T cd03822 155 --------------PEKIAVIPHGVPDPPAEPPES----------------------------LKALGGLDGRPVLLTFG 192 (366)
T ss_pred --------------CCcEEEeCCCCcCcccCCchh----------------------------hHhhcCCCCCeEEEEEe
Confidence 128999999999776543220 01122235678999999
Q ss_pred CCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC-CCCCCHHHH
Q 001705 485 RPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH-HKQSDVPDI 562 (1024)
Q Consensus 485 Rld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~-~~~~el~~l 562 (1024)
|+.+.||++.+++|+..+.. ..+++.+ ++|.+...... ......+++.++++.++|.|.|. ++.+++..+
T Consensus 193 ~~~~~K~~~~ll~a~~~~~~--~~~~~~l~i~G~~~~~~~~------~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~ 264 (366)
T cd03822 193 LLRPYKGLELLLEALPLLVA--KHPDVRLLVAGETHPDLER------YRGEAYALAERLGLADRVIFINRYLPDEELPEL 264 (366)
T ss_pred eccCCCCHHHHHHHHHHHHh--hCCCeEEEEeccCccchhh------hhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHH
Confidence 99999999999999999853 3466666 77776532211 01111145788899999999977 999999999
Q ss_pred HHHhhcCCcEEEecCCCC--CCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001705 563 YRLAAKTKGVFINPALVE--PFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWS 640 (1024)
Q Consensus 563 y~~A~~~~dv~v~ps~~E--gfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 640 (1024)
|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.+.
T Consensus 265 ~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~ 339 (366)
T cd03822 265 FSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQ 339 (366)
T ss_pred Hhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHH
Confidence 9999 9999999999 99999999999999999999999 777777889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 641 ECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 641 ~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
++++++++.++.|||+.++++|.++|
T Consensus 340 ~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 340 ALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999996799999999999887
No 56
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=9.7e-31 Score=299.20 Aligned_cols=344 Identities=19% Similarity=0.229 Sum_probs=247.7
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. + ..||.++++.+++++|.+.| |+|++++....... +.... ...
T Consensus 1 kIl~~~~~---------~----~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~~~----------~~~ 51 (358)
T cd03812 1 KILHIVGT---------M----NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDDEI----------EKL 51 (358)
T ss_pred CEEEEeCC---------C----CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHHHH----------HHc
Confidence 58888854 2 47999999999999999999 99999997632110 00111 123
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
++.+++++.... .+ ..+.. .+.+.+.+ .+||+||+|......++..+.+..+.|.
T Consensus 52 ~~~~~~~~~~~~-------~~----~~~~~-------~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~ 106 (358)
T cd03812 52 GGKIYYIPARKK-------NP----LKYFK-------KLYKLIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKV 106 (358)
T ss_pred CCeEEEecCCCc-------cH----HHHHH-------HHHHHHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCe
Confidence 667776553111 01 11111 11222222 4799999999876666666666677775
Q ss_pred -EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 331 -VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 331 -V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+++.|+...... . ...... . ...+...++.++.++++|....+.+... +.
T Consensus 107 ~v~~~~~~~~~~~--------~---~~~~~~-~--~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~------------ 157 (358)
T cd03812 107 RIAHSHNTSDSHD--------K---KKKILK-Y--KVLRKLINRLATDYLACSEEAGKWLFGK---VK------------ 157 (358)
T ss_pred EEEEecccccccc--------c---cchhhH-H--HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CC------------
Confidence 678887533210 0 000000 0 1224556889999999998877765332 11
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
..++.+||||+|...+.+... . ..........++++.|+++||+.+.
T Consensus 158 ---------~~~~~vi~ngvd~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~i~~vGr~~~~ 204 (358)
T cd03812 158 ---------NKKFKVIPNGIDLEKFIFNEE----------------------I--RKKRRELGILEDKFVIGHVGRFSEQ 204 (358)
T ss_pred ---------cccEEEEeccCcHHHcCCCch----------------------h--hhHHHHcCCCCCCEEEEEEeccccc
Confidence 128999999999987754431 0 0012223334678899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+..+. ...+++.+ |+|+++. ...+.+.++++++.++|.|+|+ .+++..+|+.|
T Consensus 205 Kg~~~li~a~~~l~--~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 267 (358)
T cd03812 205 KNHEFLIEIFAELL--KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM-- 267 (358)
T ss_pred cChHHHHHHHHHHH--HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc--
Confidence 99999999999995 34567776 7888764 3556677888999999999998 78999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|++|+||..|+||++++||||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+.++.++.++..
T Consensus 268 --di~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 268 --DVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred --CEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhc
Confidence 9999999999999999999999999999999999999988 5567776778999999999999999998888777766
Q ss_pred HH
Q 001705 649 NI 650 (1024)
Q Consensus 649 ~~ 650 (1024)
..
T Consensus 345 ~~ 346 (358)
T cd03812 345 GL 346 (358)
T ss_pred cc
Confidence 54
No 57
>PLN02382 probable sucrose-phosphatase
Probab=100.00 E-value=1e-31 Score=310.45 Aligned_cols=245 Identities=18% Similarity=0.245 Sum_probs=194.0
Q ss_pred EEEEEecCCCCCCC--chhhHHHH-HHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 750 IVIAADCYDSDGNT--TETFQATI-KNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 750 llIa~DlDGTl~~~--~~~i~~~~-~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
++|++||||||+++ ++.++... ..+++++.++ |+.|++||||++..+..+++.+++ ..|+++||+||++|+
T Consensus 10 ~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l--~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 10 LMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPL--LTPDITIMSVGTEIA 83 (413)
T ss_pred EEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCC--CCCCEEEEcCCcEEE
Confidence 45669999998876 44677444 4444888776 999999999999999999999887 458999999999999
Q ss_pred cCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCC
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGF 906 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~ 906 (1024)
+. +....+..|...+...|....+...+..+.. +.++....+..+|++++.++.......+++.+.+...+.
T Consensus 84 ~~-~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~-------l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~ 155 (413)
T PLN02382 84 YG-ESMVPDHGWVEYLNKKWDREIVVEETSKFPE-------LKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGL 155 (413)
T ss_pred eC-CCCccChhHHHHHhccCChhhHHHHHhcCCC-------cccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCC
Confidence 86 3566788999999999986544444333322 234555667789999987543323334556666666667
Q ss_pred eEEEEEecCCeEEEEecCCCCHHHHHHHHHHHh---CCCCCCEEEEeCCCCCCChHHhhcCCC-ceEEecCCCCCChHHH
Q 001705 907 RCNLVYTRAGSRLNVVPSFASRIQALRYLSIRW---GIDLSKMVVFVGEKGDTDYEDLLVGLH-KTLILRGSVMYGSEKL 982 (1024)
Q Consensus 907 ~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~---gi~~~~vvafiGDs~N~D~~~Ml~~ag-~gVaMgna~~NA~~el 982 (1024)
.+.++++++. ++||+|+++|||+||++|++++ |++++++++| ||++| | ++||+.+| +||||+ ||.+++
T Consensus 156 ~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iaf-GDs~N-D-leMl~~ag~~gvam~----NA~~el 227 (413)
T PLN02382 156 DVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVC-GDSGN-D-AELFSVPDVYGVMVS----NAQEEL 227 (413)
T ss_pred cEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEE-eCCHH-H-HHHHhcCCCCEEEEc----CCcHHH
Confidence 8889999886 9999999999999999999999 9999999998 99999 9 99999999 899999 999999
Q ss_pred hcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 983 LHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 983 k~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
|+.++.+ + .+.+++. .+.++.++||++||++|++
T Consensus 228 k~~a~~~-----~-~~~~~~~-~a~~~~~~GI~~al~~f~l 261 (413)
T PLN02382 228 LQWYAEN-----A-KDNPKII-HATERCAAGIIQAIGHFNL 261 (413)
T ss_pred HHHHHhh-----c-cCCCcEE-EcCCCCccHHHHHHHHhCC
Confidence 9876522 1 2334554 4578899999999999985
No 58
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.9e-30 Score=295.06 Aligned_cols=355 Identities=22% Similarity=0.262 Sum_probs=249.5
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.+ + ..||.++++.+|+++|.+.| |+|++++.... +. .+.. ..
T Consensus 1 ~il~~~~~---------~----~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~--------~~~~--------~~ 48 (360)
T cd04951 1 KILYVITG---------L----GLGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SE--------VKPP--------ID 48 (360)
T ss_pred CeEEEecC---------C----CCCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CC--------ccch--------hh
Confidence 47888754 2 26999999999999999999 99999986421 10 0000 00
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC-CCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL-NVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~-~ip 329 (1024)
......++.... .+. +.. ....+.+.+.+ .+||+||+|......++.+++... ++|
T Consensus 49 ~~~~~~~~~~~~--------~~~----~~~----~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~ 105 (360)
T cd04951 49 ATIILNLNMSKN--------PLS----FLL----ALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPP 105 (360)
T ss_pred ccceEEeccccc--------chh----hHH----HHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCc
Confidence 111122221110 111 111 11122222222 579999999887666666655443 689
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+..... . ..... .+.....++.++++|....+.+.....
T Consensus 106 ~v~~~h~~~~~~------------~---~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~~--------------- 150 (360)
T cd04951 106 LICTAHSKNEGG------------R---LRMLA-----YRLTDFLSDLTTNVSKEALDYFIASKA--------------- 150 (360)
T ss_pred EEEEeeccCchh------------H---HHHHH-----HHHHhhccCceEEEcHHHHHHHHhccC---------------
Confidence 999999763210 0 00011 122344577788888776666433211
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.+..++.+||||+|...|.+... ........+...+++++++++||+.+.
T Consensus 151 -------~~~~~~~~i~ng~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~ 200 (360)
T cd04951 151 -------FNANKSFVVYNGIDTDRFRKDPA-----------------------RRLKIRNALGVKNDTFVILAVGRLVEA 200 (360)
T ss_pred -------CCcccEEEEccccchhhcCcchH-----------------------HHHHHHHHcCcCCCCEEEEEEeeCchh
Confidence 11238999999999877654321 111122233345678899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+.++. ...+++.+ |+|+++. ...+.+.+.++++.++|.|+|. .+++..+|+.|
T Consensus 201 kg~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 263 (360)
T cd04951 201 KDYPNLLKAFAKLL--SDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVKLLGL--RDDIAAYYNAA-- 263 (360)
T ss_pred cCcHHHHHHHHHHH--hhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhh--
Confidence 99999999999885 34466776 7787764 2456677788888889999997 47899999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++||||+|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..++.+ +
T Consensus 264 --d~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~ 338 (360)
T cd04951 264 --DLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-R 338 (360)
T ss_pred --ceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999975 8999999999999999999995 55655555555 6
Q ss_pred HHH-hcCCHHHHHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.+ +.|||+.++++|.++|.
T Consensus 339 ~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 339 ERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHhcCHHHHHHHHHHHhh
Confidence 666 79999999999999985
No 59
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=3.8e-30 Score=291.91 Aligned_cols=361 Identities=22% Similarity=0.263 Sum_probs=262.1
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|... ++ .||.+++++.|+++|.+.| ++|.+++.....+. ... ....
T Consensus 1 ~i~~i~~~---------~~----~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~-----~~~----------~~~~ 50 (365)
T cd03807 1 KVLHVITG---------LD----VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL-----GEE----------LEEA 50 (365)
T ss_pred CeEEEEee---------cc----CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh-----hHH----------HHhc
Confidence 57888855 22 3999999999999999999 99999987532111 010 1113
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHcc-CCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGA-LNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~-~~ip 329 (1024)
++.++.++.... +..+. +. ..+.+.+.+ .+||+||+|.......+...... .++|
T Consensus 51 ~i~v~~~~~~~~---------~~~~~-~~-------~~~~~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T cd03807 51 GVPVYCLGKRPG---------RPDPG-AL-------LRLYKLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPP 106 (365)
T ss_pred CCeEEEEecccc---------cccHH-HH-------HHHHHHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCc
Confidence 777777664211 11111 11 112222222 47999999987666665555555 6899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+...... + ........ .+......++.+++.|....+.+... ++..
T Consensus 107 ~i~~~~~~~~~~~------~-------~~~~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~----------- 158 (365)
T cd03807 107 VIWGIRHSDLDLG------K-------KSTRLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYPP----------- 158 (365)
T ss_pred EEEEecCCccccc------c-------hhHhHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCCh-----------
Confidence 9999998643311 0 00111112 24456778999999998776654332 1222
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
.++.++|||+|...+.+... ........+..+++.++|+++||+.+.
T Consensus 159 ----------~~~~vi~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~i~~~G~~~~~ 205 (365)
T cd03807 159 ----------KKIVVIPNGVDTERFSPDLD-----------------------ARARLREELGLPEDTFLIGIVARLHPQ 205 (365)
T ss_pred ----------hheeEeCCCcCHHhcCCccc-----------------------chHHHHHhcCCCCCCeEEEEecccchh
Confidence 28899999999887754431 011112233345677899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHH-HcCCCCCEEeCCCCCCCCHHHHHHHhh
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID-KYDLYGQVAYPKHHKQSDVPDIYRLAA 567 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~-~~~l~~~V~~~g~~~~~el~~ly~~A~ 567 (1024)
||++.+++|+..+.+ ..+++.+ ++|.++... .+..... .+++.++|.|.|. .+++..+|+.|
T Consensus 206 K~~~~li~a~~~l~~--~~~~~~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a- 269 (365)
T cd03807 206 KDHATLLRAAALLLK--KFPNARLLLVGDGPDRA-----------NLELLALKELGLEDKVILLGE--RSDVPALLNAL- 269 (365)
T ss_pred cCHHHHHHHHHHHHH--hCCCeEEEEecCCcchh-----------HHHHHHHHhcCCCceEEEccc--cccHHHHHHhC-
Confidence 999999999999853 3566766 667765422 2233333 7788889999996 57899999999
Q ss_pred cCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 568 KTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 568 ~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++++|+..|+||++++|||+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.+++++++
T Consensus 270 ---di~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~ 344 (365)
T cd03807 270 ---DVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAAR 344 (365)
T ss_pred ---CEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976 89999999999999999999999999999999999
Q ss_pred HHH-hcCCHHHHHHHHHHHHH
Q 001705 648 KNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.+ ++|||+..+++|.+.|+
T Consensus 345 ~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 345 ERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 68999999999999873
No 60
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=3.3e-30 Score=290.02 Aligned_cols=344 Identities=23% Similarity=0.343 Sum_probs=250.1
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ++ + .||.++++.+|+++|.+.| |+|++++..... . ... ...+
T Consensus 1 kI~i~~~~---------~~--~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~-~-------~~~--------~~~~ 50 (348)
T cd03820 1 KILFVIPS---------LG--N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE-P-------PFY--------ELDP 50 (348)
T ss_pred CeEEEecc---------cc--C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC-C-------Ccc--------ccCC
Confidence 58888855 22 2 8999999999999999999 999999886432 0 000 1123
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCC-CC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALN-VP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~-ip 329 (1024)
++.+..++..... ..+..+ . ....+.+.+.+ .+||+||+|+........ ....+ +|
T Consensus 51 ~~~~~~~~~~~~~------~~~~~~-~-------~~~~~~~~l~~-------~~~d~i~~~~~~~~~~~~--~~~~~~~~ 107 (348)
T cd03820 51 KIKVIDLGDKRDS------KLLARF-K-------KLRRLRKLLKN-------NKPDVVISFLTSLLTFLA--SLGLKIVK 107 (348)
T ss_pred ccceeeccccccc------chhccc-c-------chHHHHHhhcc-------cCCCEEEEcCchHHHHHH--HHhhcccc
Confidence 6666666542220 000000 0 01111112211 479999999876222212 22223 59
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+....... . . .....++..++.+|.+++.|+.........
T Consensus 108 ~i~~~~~~~~~~~~-----------~--~----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~----------------- 153 (348)
T cd03820 108 LIVSEHNSPDAYKK-----------R--L----RRLLLRRLLYRRADAVVVLTEEDRALYYKK----------------- 153 (348)
T ss_pred EEEecCCCccchhh-----------h--h----HHHHHHHHHHhcCCEEEEeCHHHHHHhhcc-----------------
Confidence 99999975322110 0 0 001135667899999999998765221111
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
...++.++|||++...+.+. ...+++.|+++|++.+.
T Consensus 154 --------~~~~~~vi~~~~~~~~~~~~-----------------------------------~~~~~~~i~~~g~~~~~ 190 (348)
T cd03820 154 --------FNKNVVVIPNPLPFPPEEPS-----------------------------------SDLKSKRILAVGRLVPQ 190 (348)
T ss_pred --------CCCCeEEecCCcChhhcccc-----------------------------------CCCCCcEEEEEEeeccc
Confidence 11389999999998755322 02457899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+..+.+ ..+++.+ ++|.++.. ..+.+++.++++.++|.|.|. .+++..+|+.|
T Consensus 191 K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 253 (348)
T cd03820 191 KGFDLLIEAWAKIAK--KHPDWKLRIVGDGPER-----------EALEALIKELGLEDRVILLGF--TKNIEEYYAKA-- 253 (348)
T ss_pred cCHHHHHHHHHHHHh--cCCCeEEEEEeCCCCH-----------HHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC--
Confidence 999999999999963 4566666 77876542 345567888899999999998 78999999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G-g~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++|+||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++|+.+++++++++
T Consensus 254 --d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~ 331 (348)
T cd03820 254 --SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANAR 331 (348)
T ss_pred --CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999864 567788777799999999999999999999999999999999997
Q ss_pred HHHhcCCHHHHHHHHH
Q 001705 648 KNIHRFSWPEHCRNYL 663 (1024)
Q Consensus 648 ~~~~~fsw~~~a~~~l 663 (1024)
+.++.|+|+.++++|.
T Consensus 332 ~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 332 ESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHhCHHHHHHHhc
Confidence 7778999999999885
No 61
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=6.1e-30 Score=289.19 Aligned_cols=371 Identities=27% Similarity=0.350 Sum_probs=268.8
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. ++ +..||...++..|+++|.+.| |+|++++........... . .
T Consensus 1 kI~ii~~~---------~~--~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~-----~-----------~ 51 (374)
T cd03801 1 KILLVTPE---------YP--PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEE-----V-----------G 51 (374)
T ss_pred CeeEEecc---------cC--CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceee-----e-----------c
Confidence 68899866 22 337999999999999999999 999999987432211000 0 0
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
......... +... ............+...+.+ .+||+||+|++........+....++|+
T Consensus 52 ~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T cd03801 52 GIVVVRPPP------------LLRV-RRLLLLLLLALRLRRLLRR-------ERFDVVHAHDWLALLAAALAARLLGIPL 111 (374)
T ss_pred CcceecCCc------------cccc-chhHHHHHHHHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHHhcCCcE
Confidence 001110000 0000 0000011111112222222 4799999999876666556677789999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
+++.|+......... ....+. .....+...+..+|.+++.|....+.+...+..
T Consensus 112 i~~~h~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~--------------- 165 (374)
T cd03801 112 VLTVHGLEFGRPGNE---------LGLLLK--LARALERRALRRADRIIAVSEATREELRELGGV--------------- 165 (374)
T ss_pred EEEeccchhhccccc---------hhHHHH--HHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC---------------
Confidence 999998754321100 000111 122235677899999999999888776554321
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
...++.++|||+|...+.+.. ..........++++.|+++|++.+.|
T Consensus 166 -------~~~~~~~i~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~~~g~~~~~k 212 (374)
T cd03801 166 -------PPEKITVIPNGVDTERFRPAP--------------------------RAARRRLGIPEDEPVILFVGRLVPRK 212 (374)
T ss_pred -------CCCcEEEecCcccccccCccc--------------------------hHHHhhcCCcCCCeEEEEecchhhhc
Confidence 112899999999988764321 00001111235678999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++|+..+.. ..+++.+ ++|+++ ....+...+.+++...+|.+.|+++.+++..+|+.|
T Consensus 213 ~~~~~i~~~~~~~~--~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~--- 276 (374)
T cd03801 213 GVDLLLEALAKLRK--EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAA--- 276 (374)
T ss_pred CHHHHHHHHHHHhh--hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc---
Confidence 99999999999853 3466776 667543 245566777788899999999999999999999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
|++++|+..|++|++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++++++.++++++++++.
T Consensus 277 -di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 355 (374)
T cd03801 277 -DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARER 355 (374)
T ss_pred -CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998899999999999999999999999999999999999977
Q ss_pred H-hcCCHHHHHHHHHHHH
Q 001705 650 I-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 650 ~-~~fsw~~~a~~~l~~~ 666 (1024)
+ +.|+|+.+++++.+.|
T Consensus 356 ~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 356 VAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHhcCHHHHHHHHHHhh
Confidence 7 7999999999999876
No 62
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=3.1e-30 Score=298.91 Aligned_cols=375 Identities=17% Similarity=0.171 Sum_probs=243.0
Q ss_pred CceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCC-
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG- 246 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~- 246 (1024)
++|||++++.-++ |..+|+...+..++..|+++|. |+|+|+++......-...|+.....-++...+
T Consensus 3 ~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~ 70 (462)
T PLN02846 3 KKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEA 70 (462)
T ss_pred CCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhh
Confidence 5699999997643 7899999999999999999993 49999988653111001111000000000000
Q ss_pred --CCCCCeEEEEecCCCCCCccc-----cccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHH
Q 001705 247 --TGSCGAYIIRIPCGARDKYIA-----KESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEV 318 (1024)
Q Consensus 247 --~~~~gv~i~rip~~~~~~~~~-----k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~ 318 (1024)
.+..+-+++++|.-+...|-. ...+||. ..+.+.+.+ .+|||||+|.. ..++.
T Consensus 71 ~~~~~~~~~v~r~~s~~~p~yp~r~~~~~r~~~~~------------~~i~~~l~~-------~~pDVIHv~tP~~LG~~ 131 (462)
T PLN02846 71 YVRQWLEERISFLPKFSIKFYPGKFSTDKRSILPV------------GDISETIPD-------EEADIAVLEEPEHLTWY 131 (462)
T ss_pred hhhhhccCeEEEecccccccCcccccccccccCCh------------HHHHHHHHh-------cCCCEEEEcCchhhhhH
Confidence 111234566666433311100 0111111 122222322 58999999987 56665
Q ss_pred --HHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhh-hcCCEEEeCCHHHHHHHHhcccC
Q 001705 319 --AAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGL-DASEMVVTSTRQEIEMQWGLYDG 395 (1024)
Q Consensus 319 --a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l-~~Ad~Vi~~S~~~~~~~~~~~~~ 395 (1024)
+...++++++ +|.+.|.-...+...+ ..|.... ...++..+ .+. ..+|.|++.|... +++.+
T Consensus 132 ~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~---~l~~~~~~-----~~~r~~~d~vi~pS~~~-~~l~~---- 196 (462)
T PLN02846 132 HHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKA---FLLKYINS-----WVVDIYCHKVIRLSAAT-QDYPR---- 196 (462)
T ss_pred HHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHH---HHHHHHHH-----HHHHHhcCEEEccCHHH-HHHhh----
Confidence 6666766655 8889998433332211 1111111 01111111 111 2489999999733 22210
Q ss_pred cchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCC
Q 001705 396 FDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNP 475 (1024)
Q Consensus 396 f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 475 (1024)
.+.+.++|||.+.|.+... . .+ +.....
T Consensus 197 -------------------------~~i~~v~GVd~~~f~~~~~----~-~~----------------------~~~~~~ 224 (462)
T PLN02846 197 -------------------------SIICNVHGVNPKFLEIGKL----K-LE----------------------QQKNGE 224 (462)
T ss_pred -------------------------CEEecCceechhhcCCCcc----c-Hh----------------------hhcCCC
Confidence 3455679999998866541 0 00 000112
Q ss_pred C--CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCC
Q 001705 476 H--KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPK 552 (1024)
Q Consensus 476 ~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g 552 (1024)
+ .+.++|+||+.+.||++.||+|+..+. ...+++.| |+|+|++. .++++++.++++..++ |.|
T Consensus 225 ~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~--~~~~~~~l~ivGdGp~~-----------~~L~~~a~~l~l~~~v-f~G 290 (462)
T PLN02846 225 QAFTKGAYYIGKMVWSKGYKELLKLLHKHQ--KELSGLEVDLYGSGEDS-----------DEVKAAAEKLELDVRV-YPG 290 (462)
T ss_pred CCcceEEEEEecCcccCCHHHHHHHHHHHH--hhCCCeEEEEECCCccH-----------HHHHHHHHhcCCcEEE-ECC
Confidence 2 357999999999999999999999884 33456655 88999873 4567888888876444 778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKL 632 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~l 632 (1024)
.. +..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.||++++ |.++++++|.++
T Consensus 291 ~~---~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~ 360 (462)
T PLN02846 291 RD---HADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKA 360 (462)
T ss_pred CC---CHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHH
Confidence 63 445799999 999999999999999999999999999999998 59999999999995 899999999999
Q ss_pred HhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 633 LADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 633 l~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
++++. .+++..++ +.|||+..+++|++.++-.
T Consensus 361 l~~~~--~~~~~~a~---~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 361 LAEEP--APLTDAQR---HELSWEAATERFLRVADLD 392 (462)
T ss_pred HccCc--hhHHHHHH---HhCCHHHHHHHHHHHhccC
Confidence 98532 22222222 5899999999999999743
No 63
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.98 E-value=7.1e-32 Score=298.22 Aligned_cols=236 Identities=13% Similarity=0.136 Sum_probs=167.4
Q ss_pred EEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCC
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~ 829 (1024)
.+|++|+||||+++++.++++++++|++++++ |+.|+|||||++.++.++++++++. +++||+||+.|++.+
T Consensus 3 kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~~ 74 (272)
T PRK15126 3 RLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSLE 74 (272)
T ss_pred cEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcCC
Confidence 36779999999998889999999999999998 9999999999999999999998873 479999999999743
Q ss_pred CccccC-----cchhhhhccc--------------CCc-hhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCC
Q 001705 830 RDMVAD-----GDYEAHVEYR--------------WPG-ENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA 889 (1024)
Q Consensus 830 ~~~~~d-----~~~~~~i~~~--------------w~~-~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 889 (1024)
+..... ......+... |.. ..............................+|+.+.. ++
T Consensus 75 ~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~-~~- 152 (272)
T PRK15126 75 GELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG-DH- 152 (272)
T ss_pred CCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC-CH-
Confidence 321100 0000001000 000 0000000000000000000000001112345655443 22
Q ss_pred chhhHHHHHHHHHhc-CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCce
Q 001705 890 ETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT 968 (1024)
Q Consensus 890 ~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~g 968 (1024)
..++++.+.+... ...+.++.+... ++||+|+++|||+||++|++++||++++++|| ||+.| | ++||+.+|+|
T Consensus 153 --~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~af-GD~~N-D-i~Ml~~ag~~ 226 (272)
T PRK15126 153 --DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMAF-GDAMN-D-REMLGSVGRG 226 (272)
T ss_pred --HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEEe-cCCHH-H-HHHHHHcCCc
Confidence 2345666666443 345777777775 99999999999999999999999999999998 99999 9 9999999999
Q ss_pred EEecCCCCCChHHHhcccccCCCCCccCCCCCCeeE--eccccChhHHHHHHHhc
Q 001705 969 LILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAY--IEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 969 VaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~--vt~~~~~dgI~~aL~~~ 1021 (1024)
|||+ ||.+++|++|+ + ||.+|++|||+.+|+++
T Consensus 227 vAm~----Na~~~vK~~A~----------------~~~v~~~n~edGva~~l~~~ 261 (272)
T PRK15126 227 FIMG----NAMPQLRAELP----------------HLPVIGHCRNQAVSHYLTHW 261 (272)
T ss_pred eecc----CChHHHHHhCC----------------CCeecCCCcchHHHHHHHHH
Confidence 9999 99999999998 5 78899999999999986
No 64
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.98 E-value=2e-30 Score=295.78 Aligned_cols=363 Identities=24% Similarity=0.340 Sum_probs=256.1
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.+ ++ +...||.++|+.+|+++|++.| |.|++++........... .. .
T Consensus 1 ~ili~~~~---------~~-~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~-----~~----------~ 53 (365)
T cd03809 1 RILIDARF---------LA-SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLP-----LR----------A 53 (365)
T ss_pred CEEEechh---------hh-cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCcccccccc-----ch----------h
Confidence 57788766 33 1278999999999999999999 999999887432221100 00 0
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCE
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPM 330 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipi 330 (1024)
.... ... ......+..+..+.. .... .+.. .+||+||++++..... +..++|+
T Consensus 54 ~~~~--~~~------~~~~~~~~~~~~~~~---~~~~----~~~~-------~~~Dii~~~~~~~~~~-----~~~~~~~ 106 (365)
T cd03809 54 ALRL--LLR------LPRRLLWGLLFLLRA---GDRL----LLLL-------LGLDLLHSPHNTAPLL-----RLRGVPV 106 (365)
T ss_pred cccc--ccc------cccccccchhhHHHH---HHHH----Hhhh-------cCCCeeeecccccCcc-----cCCCCCE
Confidence 0000 000 001111111111111 1110 1111 4699999998754443 5668999
Q ss_pred EEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhc
Q 001705 331 VLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQR 410 (1024)
Q Consensus 331 V~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~ 410 (1024)
++++|++.+........ .......+. .++..++.+|.+++.|+...+.+...+.. ..
T Consensus 107 i~~~hd~~~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~------------ 163 (365)
T cd03809 107 VVTIHDLIPLRFPEYFS--------PGFRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PP------------ 163 (365)
T ss_pred EEEeccchhhhCcccCC--------HHHHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CH------------
Confidence 99999975543221110 001122222 25678899999999999888776555431 11
Q ss_pred CccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCC
Q 001705 411 GVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKK 490 (1024)
Q Consensus 411 g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~K 490 (1024)
.++.++|||+|...+.+... . ........++++.|+++||+.+.|
T Consensus 164 ---------~~~~vi~~~~~~~~~~~~~~----------------------~----~~~~~~~~~~~~~i~~~G~~~~~K 208 (365)
T cd03809 164 ---------DKIVVIPLGVDPRFRPPPAE----------------------A----EVLRALYLLPRPYFLYVGTIEPRK 208 (365)
T ss_pred ---------HHEEeeccccCccccCCCch----------------------H----HHHHHhcCCCCCeEEEeCCCcccc
Confidence 28999999999887654331 0 011122345678999999999999
Q ss_pred CHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 491 NVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 491 gi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
|++.+++++..+.. ..+++.+ ++|.+..... .....+.+.++..+|.++|+++.+++..+|+.|
T Consensus 209 ~~~~~l~~~~~~~~--~~~~~~l~i~G~~~~~~~----------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~--- 273 (365)
T cd03809 209 NLERLLEAFARLPA--KGPDPKLVIVGKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAALYRGA--- 273 (365)
T ss_pred CHHHHHHHHHHHHH--hcCCCCEEEecCCccccH----------HHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh---
Confidence 99999999999964 3334444 6676543221 122233567888999999999999999999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
|++++||..|+||++++||||+|+|||+++.|+..|++. .+|+++++.|.++++++|.+++.+++.+.++++++++.
T Consensus 274 -d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 350 (365)
T cd03809 274 -RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGLAR 350 (365)
T ss_pred -hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999985 57999999999999999999999999999999999977
Q ss_pred HhcCCHHHHHHHHH
Q 001705 650 IHRFSWPEHCRNYL 663 (1024)
Q Consensus 650 ~~~fsw~~~a~~~l 663 (1024)
+++|+|+.++++|+
T Consensus 351 ~~~~sw~~~~~~~~ 364 (365)
T cd03809 351 AKRFSWEKTARRTL 364 (365)
T ss_pred HHhCCHHHHHHHHh
Confidence 78999999999886
No 65
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.98 E-value=1.4e-31 Score=285.21 Aligned_cols=366 Identities=19% Similarity=0.249 Sum_probs=265.3
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
++|+|||.+.+ |.+||.+.+++.|++.|-+.| |.|.++|-...+- .++..+ +
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~giryl--------t 52 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIRYL--------T 52 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------cceeee--------c
Confidence 47999999876 789999999999999999999 9999999874321 233333 3
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--hHHHHHHHHccCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD--AGEVAAHLSGALN 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~--~~~~a~~l~~~~~ 327 (1024)
+|..++.+|.-. ..++..+|-+......+ +. .+.+ .+..+||.|... ...-+.+.++.+|
T Consensus 53 ~glkVyylp~~v----~~n~tT~ptv~~~~Pll-r~------i~lr-------E~I~ivhghs~fS~lahe~l~hartMG 114 (426)
T KOG1111|consen 53 NGLKVYYLPAVV----GYNQTTFPTVFSDFPLL-RP------ILLR-------ERIEIVHGHSPFSYLAHEALMHARTMG 114 (426)
T ss_pred CCceEEEEeeee----eecccchhhhhccCccc-ch------hhhh-------hceEEEecCChHHHHHHHHHHHHHhcC
Confidence 478888888632 33444444332221111 11 1111 368999999874 3444677778889
Q ss_pred CCEEEEeCCC-chhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHH
Q 001705 328 VPMVLTGHSL-GRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 328 ipiV~t~H~l-~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~ 406 (1024)
.+.|||-|++ |........ +..+ -...|...|.+||+|..-.+.. -+....
T Consensus 115 lktVfTdHSlfGfad~~si~---------------~n~l--l~~sL~~id~~IcVshtskent-vlr~~L---------- 166 (426)
T KOG1111|consen 115 LKTVFTDHSLFGFADIGSIL---------------TNKL--LPLSLANIDRIICVSHTSKENT-VLRGAL---------- 166 (426)
T ss_pred ceEEEeccccccccchhhhh---------------hcce--eeeeecCCCcEEEEeecCCCce-EEEecc----------
Confidence 9999999996 222111110 0011 2346789999999875332211 111111
Q ss_pred hhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCC
Q 001705 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRP 486 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRl 486 (1024)
...++.+|||.++.+.|.|.+. . .| ..+...|+.++||
T Consensus 167 -----------~p~kvsvIPnAv~~~~f~P~~~------------------~--~~-----------S~~i~~ivv~sRL 204 (426)
T KOG1111|consen 167 -----------APAKVSVIPNAVVTHTFTPDAA------------------D--KP-----------SADIITIVVASRL 204 (426)
T ss_pred -----------CHhHeeeccceeeccccccCcc------------------c--cC-----------CCCeeEEEEEeee
Confidence 2238999999999999998652 0 01 1344789999999
Q ss_pred CCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHH
Q 001705 487 DPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 565 (1024)
Q Consensus 487 d~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~ 565 (1024)
.+.||++.|++++.++. .++|++.+ |+|+||... .+++..+++.++.+|.++|.++.+++.+.|..
T Consensus 205 vyrKGiDll~~iIp~vc--~~~p~vrfii~GDGPk~i-----------~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~ 271 (426)
T KOG1111|consen 205 VYRKGIDLLLEIIPSVC--DKHPEVRFIIIGDGPKRI-----------DLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVR 271 (426)
T ss_pred eeccchHHHHHHHHHHH--hcCCCeeEEEecCCcccc-----------hHHHHHHHhhccCceEEecccchHHHHHHHhc
Confidence 99999999999999996 56788887 778888643 45577888999999999999999999999999
Q ss_pred hhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001705 566 AAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 566 A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
. |+|++||+.|.||++++|||+||+|||+|++||.+|++-.. -+......++++++++++++..-..- -..
T Consensus 272 G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p~~ 342 (426)
T KOG1111|consen 272 G----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---PLE 342 (426)
T ss_pred C----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---chh
Confidence 9 99999999999999999999999999999999999998642 23344557889999988888632111 122
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHhhhcC
Q 001705 646 GLKNI-HRFSWPEHCRNYLSHVEHSRNRH 673 (1024)
Q Consensus 646 ~~~~~-~~fsw~~~a~~~l~~~~~~~~~~ 673 (1024)
..+.+ +.|+|...+++..+.|.++....
T Consensus 343 ~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 343 FHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 23444 58999999999999999887654
No 66
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.98 E-value=1.7e-30 Score=297.46 Aligned_cols=344 Identities=24% Similarity=0.224 Sum_probs=245.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++.. ...||.++++.+|+++|.+.| |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 899999854 235899999999999999999 9999997651
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHcc--CC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGA--LN 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~--~~ 327 (1024)
. . ++ +.+. ..+||+||+|+...+.+....... .+
T Consensus 41 -~----~--------------~~------------------~~~~-------~~~~diih~~~~~~~~~~~~~~~~~~~~ 76 (365)
T cd03825 41 -K----A--------------LI------------------SKIE-------IINADIVHLHWIHGGFLSIEDLSKLLDR 76 (365)
T ss_pred -c----h--------------hh------------------hChh-------cccCCEEEEEccccCccCHHHHHHHHcC
Confidence 0 0 00 0000 147999999986544433333333 38
Q ss_pred CCEEEEeCCCchhhhHHHH--------hcCC---CC---cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcc
Q 001705 328 VPMVLTGHSLGRNKFEQLL--------KQGR---LP---KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLY 393 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~--------~~g~---~~---~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~ 393 (1024)
+|+|++.|+.......... ..+. .. ..........++. .......++.++++|+...+.+...+
T Consensus 77 ~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~~~~~~~ 154 (365)
T cd03825 77 KPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLADCARSSS 154 (365)
T ss_pred CCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHHHHHhcc
Confidence 9999999986432211000 0000 00 0000111111111 11223567788888876555443322
Q ss_pred cCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhC
Q 001705 394 DGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFT 473 (1024)
Q Consensus 394 ~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 473 (1024)
. ....++.++|||+|.+.|.+... ......+..
T Consensus 155 ~----------------------~~~~~~~vi~ngi~~~~~~~~~~-------------------------~~~~~~~~~ 187 (365)
T cd03825 155 L----------------------FKGIPIEVIPNGIDTTIFRPRDK-------------------------REARKRLGL 187 (365)
T ss_pred c----------------------cCCCceEEeCCCCcccccCCCcH-------------------------HHHHHHhCC
Confidence 1 11238999999999988754431 011222333
Q ss_pred CCCCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 474 NPHKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
.++++++++.|+... .||++.+++|+..+... ..+++.+ ++|+++.... .++..+|.|
T Consensus 188 ~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~~------------------~~~~~~v~~ 248 (365)
T cd03825 188 PADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEIP------------------PDLPFPVHY 248 (365)
T ss_pred CCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhhh------------------ccCCCceEe
Confidence 456677777777655 89999999999988532 2467766 6676643111 145568999
Q ss_pred CCCCC-CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHH
Q 001705 551 PKHHK-QSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADAL 629 (1024)
Q Consensus 551 ~g~~~-~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI 629 (1024)
+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|
T Consensus 249 ~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l 324 (365)
T cd03825 249 LGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGI 324 (365)
T ss_pred cCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHH
Confidence 99998 67899999999 99999999999999999999999999999999999999998899999999999999999
Q ss_pred HHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 630 LKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 630 ~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
.+++.+++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 325 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 325 EWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999999998 6999999999999999753
No 67
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.98 E-value=3.8e-31 Score=286.19 Aligned_cols=236 Identities=22% Similarity=0.356 Sum_probs=186.6
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++.+++.+ ++++ ++++ |+.|++||||++.++..+++.+++. .+|++||+||+.|++..
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~~----gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~- 71 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSGD----AVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGP- 71 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcCC----CceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCC-
Confidence 467999999888888888877 7776 5555 9999999999999999999998873 58899999999998752
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
....+..|...+...|....+...+..++. +..+.......+++.+...+ .....+.++.+.+...+..+.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 143 (236)
T TIGR02471 72 ELQPDRFWQKHIDHDWRRQAVVEALADIPG-------LTLQDDQEQGPFKISYLLDP-EGEPILPQIRQRLRQQSQAAKV 143 (236)
T ss_pred CCCCChhHHHHHhcCCCHHHHHHHHhcCCC-------cEeCChhcCCCeeEEEEECc-ccchHHHHHHHHHHhccCCEEE
Confidence 334456676667777775544433322221 22333333456888887643 2223456777777766666778
Q ss_pred EEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
+.+++. ++||+|+++|||.||++|++++|++++++++| ||+.| | ++||+.+|+||+|+ ||.+++|+.|+..
T Consensus 144 ~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~-GD~~n-D-~~ml~~~~~~iav~----na~~~~k~~a~~~- 214 (236)
T TIGR02471 144 ILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILVA-GDSGN-D-EEMLRGLTLGVVVG----NHDPELEGLRHQQ- 214 (236)
T ss_pred EEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE-cCCcc-H-HHHHcCCCcEEEEc----CCcHHHHHhhcCC-
Confidence 888875 99999999999999999999999999999998 99999 9 99999999999999 9999999998821
Q ss_pred CCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
-.|||.++.++||+++|+++++
T Consensus 215 -----------~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 215 -----------RIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred -----------cEEEcCCCChhHHHHHHHhhCC
Confidence 1268889999999999999974
No 68
>PRK10976 putative hydrolase; Provisional
Probab=99.98 E-value=1.9e-31 Score=293.84 Aligned_cols=233 Identities=15% Similarity=0.164 Sum_probs=167.8
Q ss_pred EEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCC
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~ 829 (1024)
.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++.++.++++.+++. +++||+||+.|++.+
T Consensus 3 kli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~~ 74 (266)
T PRK10976 3 QVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDTD 74 (266)
T ss_pred eEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECCC
Confidence 47779999999998889999999999999998 9999999999999999999998873 479999999999743
Q ss_pred CccccCcchhhhhcccCCchhHHHHHhhh----------------------------hhcc-CCCCcccccccCCCCceE
Q 001705 830 RDMVADGDYEAHVEYRWPGENVRSVVPRV----------------------------ARAE-DGAEDDIVGFVDASSSRC 880 (1024)
Q Consensus 830 ~~~~~d~~~~~~i~~~w~~~~v~~~l~~~----------------------------~~~~-~~~~~~~~~~~~~~~~~k 880 (1024)
+.... ...+ ..+.+..++..+ .... .................+
T Consensus 75 ~~~i~----~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~k 146 (266)
T PRK10976 75 GNLIF----SHNL----DRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSK 146 (266)
T ss_pred CCEeh----hhcC----CHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceE
Confidence 32111 0000 011111111100 0000 000000000011123445
Q ss_pred EEEEecCCCchhhHHHHHHHHHhc-CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChH
Q 001705 881 QSYSIKPGAETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959 (1024)
Q Consensus 881 ~~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~ 959 (1024)
+.+...+. ...+++.+.+... +..+.++.+.+. ++||+|+++|||.||++|++++||++++++|| ||+.| | +
T Consensus 147 i~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~viaf-GD~~N-D-i 219 (266)
T PRK10976 147 VFFTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAF-GDGMN-D-A 219 (266)
T ss_pred EEEEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEE-cCCcc-c-H
Confidence 54443221 2344555555432 345777777775 99999999999999999999999999999998 99999 9 9
Q ss_pred HhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 960 ~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
+||+.+|+||||+ ||.+++|+.|+ ..+||.++++|||+.+|+++.+
T Consensus 220 ~Ml~~ag~~vAm~----NA~~~vK~~A~--------------~~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 220 EMLSMAGKGCIMG----NAHQRLKDLLP--------------ELEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHHHcCCCeeec----CCcHHHHHhCC--------------CCeecccCchHHHHHHHHHHhh
Confidence 9999999999999 99999999975 1158899999999999999854
No 69
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.98 E-value=1.8e-29 Score=285.23 Aligned_cols=347 Identities=23% Similarity=0.331 Sum_probs=256.7
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
.||...++.+|+++|.+.| |+|++++....... . ....++.++.+|.... .. ..+.
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~---------~--------~~~~~~~~~~~~~~~~--~~---~~~~ 64 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE---------E--------LEALGVKVIPIPLDRR--GI---NPFK 64 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc---------c--------cccCCceEEecccccc--cc---ChHh
Confidence 5799999999999999999 99999998643221 0 1224778888775431 00 0111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHc-cCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSG-ALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~-~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
. +.....+.+.+.+ .+||+||+|......++.+.++ ..+.+++++.|+.+......
T Consensus 65 ---~-----~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------- 121 (359)
T cd03808 65 ---D-----LKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSG-------- 121 (359)
T ss_pred ---H-----HHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccc--------
Confidence 1 1111222233322 5799999998766666666665 45678899999764432110
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
. ....+++.+ ++..++.+|.+++.|+...+.+...+.. + ...++.++|+|+|..
T Consensus 122 -~--~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~~~~ 175 (359)
T cd03808 122 -G--LKRRLYLLL--ERLALRFTDKVIFQNEDDRDLALKLGII--K-------------------KKKTVLIPGSGVDLD 175 (359)
T ss_pred -h--hHHHHHHHH--HHHHHhhccEEEEcCHHHHHHHHHhcCC--C-------------------cCceEEecCCCCChh
Confidence 0 011222332 5667889999999999887765443211 0 012788899999988
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~ 512 (1024)
.+.+... . ..++++.|+++||+.+.||++.+++++..+.+ ..+++.
T Consensus 176 ~~~~~~~--------------------~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~~~~ 221 (359)
T cd03808 176 RFSPSPE--------------------P------------IPEDDPVFLFVARLLKDKGIDELLEAARILKA--KGPNVR 221 (359)
T ss_pred hcCcccc--------------------c------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHh--cCCCeE
Confidence 7654331 0 12567899999999999999999999999853 456676
Q ss_pred E-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHH
Q 001705 513 L-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAA 591 (1024)
Q Consensus 513 L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA 591 (1024)
+ ++|.++...... .. ++...+...+|.|.|+ .+++..+|+.| |++++|+..|+||++++|||+
T Consensus 222 l~i~G~~~~~~~~~--------~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea~~ 285 (359)
T cd03808 222 LLLVGDGDEENPAA--------IL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEAMA 285 (359)
T ss_pred EEEEcCCCcchhhH--------HH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHHHH
Confidence 6 677765432211 10 3566777889999999 78999999999 999999999999999999999
Q ss_pred cCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHH
Q 001705 592 YGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 592 ~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 663 (1024)
||+|||+|+.|+..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 286 ~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 286 MGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred cCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99999999999999999989999999999999999999999999999999999999997 7999999999876
No 70
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.98 E-value=1.4e-31 Score=295.52 Aligned_cols=234 Identities=12% Similarity=0.079 Sum_probs=168.1
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 457789999999998889999999999999998 99999999999999999999988742 1358999999999963
Q ss_pred -CCccccCcchhhhhcccCCchhHHHHHhh----------------------------hhhccCCCCcc--ccccc-CCC
Q 001705 829 -WRDMVADGDYEAHVEYRWPGENVRSVVPR----------------------------VARAEDGAEDD--IVGFV-DAS 876 (1024)
Q Consensus 829 -~~~~~~d~~~~~~i~~~w~~~~v~~~l~~----------------------------~~~~~~~~~~~--~~~~~-~~~ 876 (1024)
++... +...+. .+.+..++.. ........... ..... ...
T Consensus 78 ~~~~~i----~~~~l~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (270)
T PRK10513 78 ADGETV----AQTALS----YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNL 149 (270)
T ss_pred CCCCEE----EecCCC----HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccC
Confidence 22211 000000 0000000000 00000000000 00000 011
Q ss_pred CceEEEEEecCCCchhhHHHHHHHHHh-cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCC
Q 001705 877 SSRCQSYSIKPGAETRKVDNIRQRLRM-RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGD 955 (1024)
Q Consensus 877 ~~~k~~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N 955 (1024)
...++... .+. ..++++.+.+.. ....+.++.+.+. ++||+|+++|||+||++|++++||+++++++| ||+.|
T Consensus 150 ~~~k~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~af-GD~~N 223 (270)
T PRK10513 150 QFPKVMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMAI-GDQEN 223 (270)
T ss_pred CceEEEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEEE-CCchh
Confidence 23444433 211 233444444432 2345777778775 99999999999999999999999999999998 99999
Q ss_pred CChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 956 TDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 956 ~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
| ++||+.+|+||||+ ||.+++|+.|+ +||.++++|||+.+|+++.+
T Consensus 224 -D-i~Ml~~ag~~vAm~----NA~~~vK~~A~----------------~vt~~n~~dGva~~i~~~~~ 269 (270)
T PRK10513 224 -D-IAMIEYAGVGVAMG----NAIPSVKEVAQ----------------FVTKSNLEDGVAFAIEKYVL 269 (270)
T ss_pred -h-HHHHHhCCceEEec----CccHHHHHhcC----------------eeccCCCcchHHHHHHHHhc
Confidence 9 99999999999999 99999999999 99999999999999999854
No 71
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=2.2e-29 Score=285.80 Aligned_cols=362 Identities=28% Similarity=0.366 Sum_probs=259.3
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
.||.+.++..++++|.+.| |+|++++.....+....... .......+.. .........+
T Consensus 13 ~~g~~~~~~~~~~~l~~~g--~~v~v~~~~~~~~~~~~~~~----------------~~~~~~~~~~---~~~~~~~~~~ 71 (377)
T cd03798 13 NGGGGIFVKELARALAKRG--VEVTVLAPGPWGPKLLDLLK----------------GRLVGVERLP---VLLPVVPLLK 71 (377)
T ss_pred CchHHHHHHHHHHHHHHCC--CceEEEecCCCCCCchhhcc----------------cccccccccc---cCcchhhccc
Confidence 7999999999999999999 99999998654322110000 0000000000 0000000000
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
... ........+.+.+.. ...+||+||+|+. ....++..+.+..++|++++.|+........
T Consensus 72 ~~~----~~~~~~~~~~~~l~~-----~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~-------- 134 (377)
T cd03798 72 GPL----LYLLAARALLKLLKL-----KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPR-------- 134 (377)
T ss_pred cch----hHHHHHHHHHHHHhc-----ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCc--------
Confidence 000 011111122222220 1157999999975 4566677777778899999999864432110
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
+...+. .++..+..+|.+++.|+...+.+...+ + +..++.++|||+|..
T Consensus 135 ------~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~--~---------------------~~~~~~~i~~~~~~~ 183 (377)
T cd03798 135 ------KRLLRA--LLRRALRRADAVIAVSEALADELKALG--I---------------------DPEKVTVIPNGVDTE 183 (377)
T ss_pred ------hhhHHH--HHHHHHhcCCeEEeCCHHHHHHHHHhc--C---------------------CCCceEEcCCCcCcc
Confidence 001122 255678999999999998877754432 1 113899999999998
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEE
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMT 512 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~ 512 (1024)
.+.+... . . ..+.....+++.|+++|++.+.||++.+++++..+.. ..+++.
T Consensus 184 ~~~~~~~----------------------~--~--~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~--~~~~~~ 235 (377)
T cd03798 184 RFSPADR----------------------A--E--ARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK--KRPDVH 235 (377)
T ss_pred cCCCcch----------------------H--H--HHhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh--cCCCeE
Confidence 7755431 0 0 0111223567899999999999999999999999853 356777
Q ss_pred E-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHH
Q 001705 513 L-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAA 591 (1024)
Q Consensus 513 L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA 591 (1024)
+ ++|.++. ...+...++++++.++|.+.|+++.+++..+|+.| |++++|+..|+||++++|||+
T Consensus 236 l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~ 300 (377)
T cd03798 236 LVIVGDGPL-----------REALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMA 300 (377)
T ss_pred EEEEcCCcc-----------hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHh
Confidence 6 6676653 23455677788888999999999999999999999 999999999999999999999
Q ss_pred cCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHh
Q 001705 592 YGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 592 ~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~ 669 (1024)
||+|||+++.|+..+++.++.+|++++++|+++++++|.+++++++. ++..++++.+ +.|+|+.+++++.+.|+++
T Consensus 301 ~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 301 CGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred cCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999887 6777777777 7999999999999998753
No 72
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=2.4e-29 Score=285.69 Aligned_cols=355 Identities=23% Similarity=0.285 Sum_probs=245.2
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|+.. ++ +..+||.++++.+|+++|.++| |+|++++.......... ...
T Consensus 1 kIl~i~~~---------~~-~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~----------------~~~ 52 (359)
T cd03823 1 RILVVNHL---------YP-PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQDK----------------EVI 52 (359)
T ss_pred CeeEEccc---------CC-cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCccc----------------ccc
Confidence 68999966 34 4568999999999999999999 99999988643221100 001
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh-HHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~~~ip 329 (1024)
+..+...+.............+..... ........+.+.+.+ .+||+||+|.... +.......+..++|
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~ 122 (359)
T cd03823 53 GVVVYGRPIDEVLRSALPRDLFHLSDY---DNPAVVAEFARLLED-------FRPDVVHFHHLQGLGVSILRAARDRGIP 122 (359)
T ss_pred cceeeccccccccCCCchhhhhHHHhc---cCHHHHHHHHHHHHH-------cCCCEEEECCccchHHHHHHHHHhcCCC
Confidence 222222110000000000000000000 000111112222222 5799999998632 23333445566899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+.+..... . .......|.++++|+...+.+...+.
T Consensus 123 ~i~~~hd~~~~~~~-------------------~-----~~~~~~~d~ii~~s~~~~~~~~~~~~--------------- 163 (359)
T cd03823 123 IVLTLHDYWLICPR-------------------Q-----GLFKKGGDAVIAPSRFLLDRYVANGL--------------- 163 (359)
T ss_pred EEEEEeeeeeecch-------------------h-----hhhccCCCEEEEeCHHHHHHHHHcCC---------------
Confidence 99999976332100 0 00122339999999877766433221
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
...++.+||||+|...+.+... ....+++.|+++||+.+.
T Consensus 164 --------~~~~~~vi~n~~~~~~~~~~~~--------------------------------~~~~~~~~i~~~G~~~~~ 203 (359)
T cd03823 164 --------FAEKISVIRNGIDLDRAKRPRR--------------------------------APPGGRLRFGFIGQLTPH 203 (359)
T ss_pred --------CccceEEecCCcChhhcccccc--------------------------------CCCCCceEEEEEecCccc
Confidence 1128999999999887643320 012457789999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++++..+.. +++.+ ++|.++..... .... +...+|.+.|+++.+++..+|+.|
T Consensus 204 k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~~-----------~~~~---~~~~~v~~~g~~~~~~~~~~~~~a-- 263 (359)
T cd03823 204 KGVDLLLEAFKRLPR----GDIELVIVGNGLELEEE-----------SYEL---EGDPRVEFLGAYPQEEIDDFYAEI-- 263 (359)
T ss_pred cCHHHHHHHHHHHHh----cCcEEEEEcCchhhhHH-----------HHhh---cCCCeEEEeCCCCHHHHHHHHHhC--
Confidence 999999999999853 45555 77877542221 1111 556789999999999999999999
Q ss_pred CCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001705 569 TKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGL 647 (1024)
Q Consensus 569 ~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 647 (1024)
|++++||. .|+||++++||||||+|||+|+.|+..|++.++.+|++++++|.++++++|.+++++++.+++++++++
T Consensus 264 --d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~ 341 (359)
T cd03823 264 --DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIE 341 (359)
T ss_pred --CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHH
Confidence 99999997 799999999999999999999999999999998899999999999999999999999999999999988
Q ss_pred HHHhcCCHHHHHHHHHHHHH
Q 001705 648 KNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 648 ~~~~~fsw~~~a~~~l~~~~ 667 (1024)
+.... +.++++|++.|+
T Consensus 342 ~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 342 PPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HhhhH---HHHHHHHHHHhh
Confidence 87643 888888888875
No 73
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.6e-31 Score=302.38 Aligned_cols=346 Identities=18% Similarity=0.204 Sum_probs=279.7
Q ss_pred CccccccCCcchHHHHHH----------HHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC-CCCEEE
Q 001705 264 KYIAKESLWPYIHEFVDG----------ALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL-NVPMVL 332 (1024)
Q Consensus 264 ~~~~k~~lwp~~~~f~~~----------~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~-~ipiV~ 332 (1024)
..++++.|||.+|+|... ....++.|++.+.+.++.| |+||+|++++.++|.+++++. ..+++|
T Consensus 102 ~~fsn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-----DiIWVhDYhL~L~P~mlR~~~~~~~Igf 176 (486)
T COG0380 102 NGFSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIYEPG-----DIIWVHDYHLLLVPQMLRERIPDAKIGF 176 (486)
T ss_pred HHhhHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhcCCC-----CEEEEEechhhhhHHHHHHhCCCceEEE
Confidence 467899999999977653 3344577889999988887 999999999999999999876 578999
Q ss_pred EeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 333 TGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 333 t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++| .++++-.+++.+++++.+++ +||+|.++|..++++ |...++++++....
T Consensus 177 FlH------------------iPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~n-------F~~~~~r~~~~~~~ 231 (486)
T COG0380 177 FLH------------------IPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARN-------FLDLCSRLLGVTGD 231 (486)
T ss_pred EEe------------------CCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHH-------HHHHHHHhcccccc
Confidence 999 66677788899998887776 999999999999998 77778888874433
Q ss_pred cCccccC--CCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCC
Q 001705 410 RGVSCFG--RFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 410 ~g~~~~g--~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
.++..-| .+..++..+|.|||+..|..... .......+.++.+... .++++|+.++|+|
T Consensus 232 ~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~------------------~~~v~~~~~el~~~~~-~~~kiivgvDRlD 292 (486)
T COG0380 232 ADIRFNGADGRIVKVGAFPIGIDPEEFERALK------------------SPSVQEKVLELKAELG-RNKKLIVGVDRLD 292 (486)
T ss_pred ccccccccCCceEEEEEEeeecCHHHHHHhhc------------------CCchhhHHHHHHHHhc-CCceEEEEehhcc
Confidence 4444332 45558999999999988865431 1111123444444443 2389999999999
Q ss_pred CCCCHHHHHHHHhhccccCCCC----cEEEEE------ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCC
Q 001705 488 PKKNVTTLLKAFGECQPLRELA----NMTLIL------GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQS 557 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~~----~l~LIv------G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~ 557 (1024)
+.||+...+.||++|. ..+| +++++. ++.+.|+.+.....+.+++|++.++..++.+..+|...++++
T Consensus 293 y~kGi~~rl~Afe~lL--~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~ 370 (486)
T COG0380 293 YSKGIPQRLLAFERLL--EEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRN 370 (486)
T ss_pred cccCcHHHHHHHHHHH--HhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHH
Confidence 9999999999999994 5566 344422 344445557778888999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHH
Q 001705 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKL 632 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~l 632 (1024)
++.++|+.| |+++++|++|||+||++|+.|| |..|++..+|+..++ ..+++|||+|.+++|++|.++
T Consensus 371 ~l~al~~~a----Dv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~A 442 (486)
T COG0380 371 ELLALYRAA----DVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRA 442 (486)
T ss_pred HHHHHHhhh----ceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHH
Confidence 999999999 9999999999999999999999 888888889998888 459999999999999999999
Q ss_pred HhCHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 633 LADKNMWSECR-KNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 633 l~d~~~~~~~~-~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
|+++.+.++.+ +..++.+..++...|+..|+..+..
T Consensus 443 L~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 443 LTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99765555444 4555556899999999999999886
No 74
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.97 E-value=7e-31 Score=289.04 Aligned_cols=231 Identities=16% Similarity=0.199 Sum_probs=165.7
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 74 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYNG 74 (264)
T ss_pred eeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEecC
Confidence 457789999999999888999999999999998 9999999999999999999998884 27999999999997
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhhhhc------cCCCCcc--cc-------------------cccCCCCceEE
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRVARA------EDGAEDD--IV-------------------GFVDASSSRCQ 881 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~------~~~~~~~--~~-------------------~~~~~~~~~k~ 881 (1024)
+.... .. .+..+.+..++...... ....... .. .........++
T Consensus 75 -~~~i~----~~----~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
T COG0561 75 -GELLF----QK----PLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKI 145 (264)
T ss_pred -CcEEe----ee----cCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceE
Confidence 32221 11 11112222222211100 0000000 00 00000000111
Q ss_pred EEEecCCCchhhHHHHHHHHHhcCC--eEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChH
Q 001705 882 SYSIKPGAETRKVDNIRQRLRMRGF--RCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYE 959 (1024)
Q Consensus 882 ~~~~~~~~~~~~~~el~~~L~~~~~--~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~ 959 (1024)
..... ......++.+.+..... ...+..+... ++||+|+++|||.||++|++++|++++++||| ||+.| | +
T Consensus 146 ~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~af-GD~~N-D-~ 218 (264)
T COG0561 146 IALDK---DHEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIAF-GDSTN-D-I 218 (264)
T ss_pred EEEec---ChHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEEe-CCccc-c-H
Confidence 11111 12234555555654422 2334444443 69999999999999999999999999999998 99999 9 9
Q ss_pred HhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 960 DLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 960 ~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
+||+.+|+||||+ ||.+++|+.|+ ++|.+++++||+++|+++..
T Consensus 219 ~Ml~~ag~gvam~----Na~~~~k~~A~----------------~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 219 EMLEVAGLGVAMG----NADEELKELAD----------------YVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred HHHHhcCeeeecc----CCCHHHHhhCC----------------cccCCccchHHHHHHHHHhc
Confidence 9999999999999 99999999999 89999999999999999864
No 75
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.97 E-value=2.7e-31 Score=310.05 Aligned_cols=360 Identities=17% Similarity=0.155 Sum_probs=245.5
Q ss_pred CCCeEEEEecCCCC-----CCccccccCCcchHHHHH--------------HHHHHHHHHHHHHHhhhcCCCCCcceEEE
Q 001705 249 SCGAYIIRIPCGAR-----DKYIAKESLWPYIHEFVD--------------GALNHIVNMARAIGEQVNGGKPTWPYVIH 309 (1024)
Q Consensus 249 ~~gv~i~rip~~~~-----~~~~~k~~lwp~~~~f~~--------------~~l~~~~~~~~~l~~~~~~g~~~~pDvIh 309 (1024)
.++..++.++..+. ..++++..|||.+|++.+ .....++.|++.+.+.+.+| |+||
T Consensus 72 ~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-----D~VW 146 (474)
T PF00982_consen 72 LDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDLARFEEEWWEAYKRVNRRFADAIAEVYRPG-----DLVW 146 (474)
T ss_dssp ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G----HHHHHHHHHHHHHHHHHHGGG--TT------EEE
T ss_pred ccCceEEEEEcCHHHHHHHHHhhhhhccCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhCcCC-----CEEE
Confidence 34666666664321 256889999998884322 22334477889999988876 9999
Q ss_pred EcCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh---cCCEEEeCCHHH
Q 001705 310 GHYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD---ASEMVVTSTRQE 385 (1024)
Q Consensus 310 ~h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~---~Ad~Vi~~S~~~ 385 (1024)
+|++++.+++.+++++. +.+++|++| .+++...+++.+++.+.+++ .||+|.++|..+
T Consensus 147 VhDYhL~llP~~LR~~~~~~~IgfFlH------------------iPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 147 VHDYHLMLLPQMLRERGPDARIGFFLH------------------IPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp EESGGGTTHHHHHHHTT--SEEEEEE-------------------S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred EeCCcHHHHHHHHHhhcCCceEeeEEe------------------cCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 99999999999999876 789999999 77888889999888777776 999999999999
Q ss_pred HHHHHhcccCcchHHHHHHHHhhhcC--ccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCc
Q 001705 386 IEMQWGLYDGFDLKLERKLRVRRQRG--VSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPP 463 (1024)
Q Consensus 386 ~~~~~~~~~~f~~~~~r~l~~~~~~g--~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 463 (1024)
+++ |...+.++++...... ...++.+..++.++|.|||++.|..... ......
T Consensus 209 ~~n-------Fl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~------------------~~~v~~ 263 (474)
T PF00982_consen 209 ARN-------FLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLAR------------------SPEVQE 263 (474)
T ss_dssp HHH-------HHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-------------------S---H
T ss_pred HHH-------HHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhcc------------------ChHHHH
Confidence 998 7888889988776654 4445555569999999999988754321 011122
Q ss_pred chHHHhhhhCCCC-CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCC----cEEEE---E---ecCCCcccccccchHHH
Q 001705 464 MWSEVMRFFTNPH-KPTILALSRPDPKKNVTTLLKAFGECQPLRELA----NMTLI---L---GNRDDIEDMSNSSSVVL 532 (1024)
Q Consensus 464 ~~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~----~l~LI---v---G~~~~~~~l~~~~~~~~ 532 (1024)
....++..+ .+ .++|+.++|+|+.||+...++||+++. ..+| +++|+ + .+.++|+++..+..+..
T Consensus 264 ~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL--~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v 339 (474)
T PF00982_consen 264 RAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFL--ERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELV 339 (474)
T ss_dssp HHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHH--HH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHH--HhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHH
Confidence 222333332 34 589999999999999999999999994 4444 35443 2 33344667888888999
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhh
Q 001705 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-----GLPVVATKNGGPVDI 607 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-----G~PVVat~~Gg~~ei 607 (1024)
++|+....+.++.+.+++.+.++.+++.++|+.| ||+++||++|||+|+++||.|| |+.|++..+|+..++
T Consensus 340 ~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L 415 (474)
T PF00982_consen 340 GRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL 415 (474)
T ss_dssp HHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-
T ss_pred HHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc
Confidence 9999999999999999999999999999999999 9999999999999999999999 667777878887666
Q ss_pred hccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 608 LKALNNGLLVDPHDQNAIADALLKLLADKNMWS-ECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 608 i~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~-~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
- ..+++|||+|++++|+||.++|+++...+ +..+..++.+..++...|++.|++.++
T Consensus 416 ~---~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 416 S---EAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp T---TS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred C---CccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 1 23599999999999999999999876544 444455666799999999999998876
No 76
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.97 E-value=2.7e-28 Score=285.10 Aligned_cols=276 Identities=20% Similarity=0.270 Sum_probs=216.1
Q ss_pred CcceEEEEcCCC-hHHHHHHHHccCCCC-EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEe
Q 001705 303 TWPYVIHGHYAD-AGEVAAHLSGALNVP-MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVT 380 (1024)
Q Consensus 303 ~~pDvIh~h~~~-~~~~a~~l~~~~~ip-iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~ 380 (1024)
..+|++|+++.. .+..+.++.+..+.+ +|.+.|+.... +. .. ...+ +...+.+++.+|.|++
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~--~~-----~~----~~~~-----~~~~~~~~~~~d~ii~ 189 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLY--ED-----RY----PSGY-----IPLRRYLLSSLDAVFP 189 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhh--hh-----hc----cccc-----hHHHHHHHhcCCEEEE
Confidence 467899997654 344455566666665 99999975211 10 00 0011 1123446889999999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
+|+...+.+...|+. ...++.++|+|++...+.+..
T Consensus 190 ~S~~~~~~l~~~~~~----------------------~~~ki~vi~~gv~~~~~~~~~---------------------- 225 (407)
T cd04946 190 CSEQGRNYLQKRYPA----------------------YKEKIKVSYLGVSDPGIISKP---------------------- 225 (407)
T ss_pred CCHHHHHHHHHHCCC----------------------ccccEEEEECCcccccccCCC----------------------
Confidence 999888876555432 223889999999987653321
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
...+.+.|+++||+.+.||++.+++|+..+....+..++.+ ++|+++. ...+.+++
T Consensus 226 ------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~ 282 (407)
T cd04946 226 ------------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELA 282 (407)
T ss_pred ------------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHH
Confidence 01356789999999999999999999999964332335554 6787764 34566777
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP 619 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p 619 (1024)
...+..++|.|+|+++.+++..+|+.+ .+|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 283 ~~~~~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~ 360 (407)
T cd04946 283 ESKPENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSK 360 (407)
T ss_pred HhcCCCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCC
Confidence 777888899999999999999999873 128999999999999999999999999999999999999999989999987
Q ss_pred C-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHH
Q 001705 620 H-DQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYL 663 (1024)
Q Consensus 620 ~-d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l 663 (1024)
. |+++++++|.++++||+++++++++|++.+ ++|||+...++|.
T Consensus 361 ~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 361 DPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 4 899999999999999999999999999999 6999999998885
No 77
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.97 E-value=3.7e-30 Score=276.36 Aligned_cols=221 Identities=20% Similarity=0.235 Sum_probs=161.7
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCc
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD 831 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~ 831 (1024)
|++|+||||+++++.+++.++++|+++++. |+.|++||||++.++.++++.+++ ++++||+||+.|++.++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~- 71 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEG- 71 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCC-
Confidence 469999999998888999999999999987 999999999999999999999886 56899999999998521
Q ss_pred cccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEE
Q 001705 832 MVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLV 911 (1024)
Q Consensus 832 ~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~ 911 (1024)
....|...+...|....+......+.. ...+.......+++.+.. + . +.+...+...+..+.+.
T Consensus 72 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~~~~~~~ 135 (225)
T TIGR01482 72 --MDDIFLAYLEEEWFLDIVIAKTFPFSR-------LKVQYPRRASLVKMRYGI-D---V---DTVREIIKELGLNLVAV 135 (225)
T ss_pred --CceEEecccCHHHHHHHHHhcccchhh-------hccccccccceEEEeecC-C---H---HHHHHHHHhcCceEEEe
Confidence 112233323222221111111000000 011111112223332221 1 1 22333333333334333
Q ss_pred EecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCC
Q 001705 912 YTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKR 991 (1024)
Q Consensus 912 ~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~ 991 (1024)
+... ++||+|+++|||.||++|++++|++++++++| ||+.| | ++||+.+|+||||+ ||.+++|+.|+
T Consensus 136 -~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~-GD~~N-D-i~m~~~ag~~vam~----Na~~~~k~~A~---- 202 (225)
T TIGR01482 136 -DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLVC-GDSEN-D-IDLFEVPGFGVAVA----NAQPELKEWAD---- 202 (225)
T ss_pred -cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEE-CCCHh-h-HHHHHhcCceEEcC----ChhHHHHHhcC----
Confidence 4454 99999999999999999999999999999998 99999 9 99999999999999 99999999999
Q ss_pred CCccCCCCCCeeEeccccChhH----HHHHHHhcc
Q 001705 992 EDVVPPDSPNIAYIEESYEPQD----LSAALKAIK 1022 (1024)
Q Consensus 992 ~~v~~~~~~~~~~vt~~~~~dg----I~~aL~~~~ 1022 (1024)
+||.++.++| |+.+|++||
T Consensus 203 ------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 203 ------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred ------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 9999999999 999999987
No 78
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=99.97 E-value=1.5e-30 Score=290.58 Aligned_cols=248 Identities=33% Similarity=0.520 Sum_probs=177.1
Q ss_pred CCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCC-------C---ceEEEEEecCCCCCCCCcccCCC
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTE-------G---VYRVDLLTRQIASPEVDSSYGEP 236 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g-------~---v~~V~vlt~~~~~p~~~~~y~~~ 236 (1024)
+|-.+|++||+||+++++|| +|| ||||||+.||+++++||.+.+ | .-+|.++||.+.+.. ...+.++
T Consensus 270 Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 270 PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp ---SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 46679999999999999999 998 999999999999999998753 1 136999999987643 3355667
Q ss_pred ccccCCCCCCCCCCCeEEEEecCCCC----CCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC
Q 001705 237 NEMLSCPSDGTGSCGAYIIRIPCGAR----DKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY 312 (1024)
Q Consensus 237 ~e~l~~~~~~~~~~gv~i~rip~~~~----~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~ 312 (1024)
.+.+ ...++++|+|+||++. ++|++++.+|||+..|++.+...+.+- + ..+||+||+||
T Consensus 347 le~~------~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e---~--------~~~PdlI~GnY 409 (550)
T PF00862_consen 347 LEKV------SGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE---L--------QGKPDLIIGNY 409 (550)
T ss_dssp EEEE------TTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH---H--------TS--SEEEEEH
T ss_pred cccc------CCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH---h--------CCCCcEEEecc
Confidence 6665 4567999999999996 479999999999999999887765431 1 24899999999
Q ss_pred CChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhc
Q 001705 313 ADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGL 392 (1024)
Q Consensus 313 ~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~ 392 (1024)
.+.+++|.++++++|+|++++.|+++..|++ ..+..++++...|+++++|.+|..+++.||.|||+|.+|+..++..
T Consensus 410 sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~---~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~~ 486 (550)
T PF00862_consen 410 SDGNLVASLLSRKLGVTQCFIAHSLEKTKYE---DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKDT 486 (550)
T ss_dssp HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH---TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SSS
T ss_pred CcchHHHHHHHhhcCCceehhhhcccccccc---ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCccc
Confidence 9999999999999999999999999999876 3455566999999999999999999999999999999999998887
Q ss_pred ccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccC
Q 001705 393 YDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQD 438 (1024)
Q Consensus 393 ~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~ 438 (1024)
++.|..-....+.. ..+.+++.+.+.||+.++|||+|.+.|.|-.
T Consensus 487 ~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 487 VGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp BHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred cCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 77666531111111 3467888899999999999999999998876
No 79
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.9e-28 Score=292.36 Aligned_cols=538 Identities=16% Similarity=0.150 Sum_probs=381.4
Q ss_pred HHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHH
Q 001705 287 VNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRI 365 (1024)
Q Consensus 287 ~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i 365 (1024)
..+++.+.+.+++| |+||+|+++...++.+++... .+.+.++.|+ .++..++++.+
T Consensus 128 ~~f~d~ive~~~~~-----d~vwihdyhlmllp~~lr~~~~~~~ig~flhs------------------pfpssEi~r~l 184 (732)
T KOG1050|consen 128 QAFADKIVEVYEEG-----DIVWIHDYHLMLLPQMLRERFNSAKIGFFLHS------------------PFPSSEIYRCL 184 (732)
T ss_pred HHHHHHHHHhccCC-----CcEEEEcchhhccchhhhcccccceEEEeccC------------------CCChHHHHHhc
Confidence 55666677766654 999999999999999999775 6788899994 44555666777
Q ss_pred HHHHHhh---hcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh-----cCccccCCCCCcEEEeCCCCCCCCcccc
Q 001705 366 EAEELGL---DASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ-----RGVSCFGRFMPRMVVIPPGMDFSYVTTQ 437 (1024)
Q Consensus 366 ~~e~~~l---~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~-----~g~~~~g~~~~ki~VIPnGiD~~~f~~~ 437 (1024)
+.+++++ .+++.+.+++.++.++ |.....|+++.... .|++..| +...+..+|.|+|..+|...
T Consensus 185 p~r~eIl~gll~~~~i~f~t~d~arh-------Fls~c~R~l~~~~~s~~~~~~v~~rg-r~~~v~~~pigid~~r~v~~ 256 (732)
T KOG1050|consen 185 PVRKEILRGLLYDDLLGFHTDDYARH-------FLSTCSRLLGLEVASKFPTAGVSGRG-RDVSVKALPIGIDVQRFVKL 256 (732)
T ss_pred ccHHHHHHhhhccCccccccccHHHH-------HHHHHHHHHHhhhhccCCcceEEecc-ceeeeeecccccchHHhhcc
Confidence 6655444 5999999999999887 77888888888877 3444444 33478999999999988654
Q ss_pred CCCCCCccccccccCccccccCCCCcchHHHhhhhCC-CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCc----EE
Q 001705 438 DTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTN-PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELAN----MT 512 (1024)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~----l~ 512 (1024)
.. .+.+....+.+... .++++|+.++|+|+.||+..-+.||+++ +.++|. ++
T Consensus 257 ~~---------------------~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~--L~~~pe~~~kVv 313 (732)
T KOG1050|consen 257 LE---------------------LPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQF--LEEYPEWIDKVV 313 (732)
T ss_pred cc---------------------chhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHH--HHhChhhhceEE
Confidence 42 33344444444332 4789999999999999999999999998 455653 33
Q ss_pred EE-E-----ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHH
Q 001705 513 LI-L-----GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTI 586 (1024)
Q Consensus 513 LI-v-----G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~l 586 (1024)
++ + +.+.++++++........+|++........+.+.+...++..++.++|..| |++++.++.+|+++++
T Consensus 314 liqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~ 389 (732)
T KOG1050|consen 314 LIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVF 389 (732)
T ss_pred EEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhh
Confidence 32 2 334445566666677777788777777766767788999999999999999 9999999999999999
Q ss_pred HHHHHc--C--CcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH-HhcCCHHHHHHH
Q 001705 587 IEAAAY--G--LPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKN-IHRFSWPEHCRN 661 (1024)
Q Consensus 587 lEAmA~--G--~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~-~~~fsw~~~a~~ 661 (1024)
+|+.+| + .+.|.+..-|..+..+ ...++++|+|.++++.+|..++++++...+.+....-. +...+...|++.
T Consensus 390 ~e~i~~~~~~~~~lVlsef~G~~~tl~--d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~ 467 (732)
T KOG1050|consen 390 LEYILCQENKKSVLVLSEFIGDDTTLE--DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKS 467 (732)
T ss_pred hHHHHhhcccCCceEEeeecccccccc--ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHH
Confidence 999999 2 4555555444445543 45789999999999999999999887766665544443 367888888888
Q ss_pred HHHHHHHhhhcCCCCCccccCCCCCCCCCccccccccccccccccccccchhhhHHHHHHHHHHHHhhhcccCCCCCCCC
Q 001705 662 YLSHVEHSRNRHPNSHLEIMTIPGEPLSDSLRDVEDFSLRFSMEGDFKLNAELDAVTRQKNLIEAITQKASFNGNASVTH 741 (1024)
Q Consensus 662 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~s~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1024)
+++.+.++...........+ + +. .+.++. .
T Consensus 468 ~~~~l~~~~~~~~~~~~~~~------~---------------l~--------------~~~~i~---------------~ 497 (732)
T KOG1050|consen 468 FLQGLKRIWKVGFLGFRVTP------L---------------LT--------------AEHIVS---------------D 497 (732)
T ss_pred HHHhhhhhhhhccccccccc------c---------------cC--------------hhHhhh---------------h
Confidence 88855544332210000000 0 00 112233 3
Q ss_pred CCcccceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHh-cCCCCCCCCEEEec
Q 001705 742 SPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRR-CTVNIEDFDAIVCN 820 (1024)
Q Consensus 742 ~~~~~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~-~~i~~~~~d~lI~~ 820 (1024)
|.++.+|++++ |.|||+-.+.... +...|+.|..+ |+..+.|+|||....+..++.. .++ +++++
T Consensus 498 y~~s~~rli~l--dyd~t~~~~~~~~---~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aE 563 (732)
T KOG1050|consen 498 YKKSKKRLILL--DYDLTLIPPRSIK---AISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAE 563 (732)
T ss_pred hhhccceEEEe--cccccccCCCCch---HHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecc
Confidence 44677888885 5558844442222 77888888888 7889999999999999777633 233 69999
Q ss_pred CCceEEcCCCccccCcchhhhh-cccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHH
Q 001705 821 SGSELYFPWRDMVADGDYEAHV-EYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQ 899 (1024)
Q Consensus 821 nGa~I~~~~~~~~~d~~~~~~i-~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~ 899 (1024)
||..+..+.+ |.... +-.|. +.++.+++.+.+++++ ..++.....-.|++... +.+.+..++.++.+
T Consensus 564 hG~f~r~~~~-------w~~~~~~~~w~-~~v~~i~~~~~ert~G---S~ie~k~~~l~~hy~~a-d~~~g~~qA~el~~ 631 (732)
T KOG1050|consen 564 HGYFVRIPGK-------WETCVLDLDWK-DLVKDIFQYYTERTPG---SYIERKETALVWHYRNA-DPEFGELQAKELLE 631 (732)
T ss_pred cCceeccCCc-------eeeecccccHH-HHHHHHHHHHHhcCCC---ceecccCceEEEeeecc-CcchhHHHHHHHHH
Confidence 9999987621 65444 45675 7788889888887655 33444333333333333 33345667788888
Q ss_pred HHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC
Q 001705 900 RLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 900 ~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
+|......++++... ..+||-|.|+|||.|...+...+. ++.+++.++||... | ++||...
T Consensus 632 ~l~~~~~~~~v~~g~--~~Vev~~~gvsk~~~~~~~~~~~~-~~~df~~c~g~d~t-D-ed~~~~~ 692 (732)
T KOG1050|consen 632 HLESKNEPVEVVRGK--HIVEVRPQGVSKGLAAERILSEMV-KEPDFVLCIGDDRT-D-EDMFEFI 692 (732)
T ss_pred HhcccCCCeEEEecC--ceEEEcccccchHHHHHHHHHhcC-CCcceEEEecCCCC-h-HHHHHHH
Confidence 887633344444433 389999999999999999999998 44455555799776 9 9999853
No 80
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.97 E-value=1.9e-29 Score=271.78 Aligned_cols=227 Identities=14% Similarity=0.187 Sum_probs=164.1
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+.+++..+++ .+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGT----SGPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCcEEEecCeEEEEc
Confidence 347779999999998888999999999999987 999999999999999999999887 347999999999975
Q ss_pred C-CccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCe
Q 001705 829 W-RDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 829 ~-~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
. +.. .+...+. .....+..+...+.................++... . .. ..+++.+.++..+..
T Consensus 75 ~~~~~----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~l~~~~~~ 139 (230)
T PRK01158 75 FDGKR----IFLGDIE------ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALR-R-TV---PVEEVRELLEELGLD 139 (230)
T ss_pred CCCCE----EEEcchH------HHHHHHHHHHHhccccceeeecCCcccccceeeec-c-cc---cHHHHHHHHHHcCCc
Confidence 1 111 1111111 12222222211111100000000000011122111 1 11 234555556554444
Q ss_pred EEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 908 CNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 908 ~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+.++.+ .. ++||+|+++|||.|+++|++++|++++++++| ||+.| | ++||+.+|+||||+ ||.+++|+.|+
T Consensus 140 ~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~-GD~~N-D-i~m~~~ag~~vam~----Na~~~vk~~a~ 210 (230)
T PRK01158 140 LEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI-GDSEN-D-LEMFEVAGFGVAVA----NADEELKEAAD 210 (230)
T ss_pred EEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE-CCchh-h-HHHHHhcCceEEec----CccHHHHHhcc
Confidence 555444 33 89999999999999999999999999999998 99999 9 99999999999999 99999999999
Q ss_pred cCCCCCccCCCCCCeeEeccccChhHHHHHHHhccc
Q 001705 988 AFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIKI 1023 (1024)
Q Consensus 988 ~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~~ 1023 (1024)
+||.++++|||+++|+++.+
T Consensus 211 ----------------~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 211 ----------------YVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred ----------------eEecCCCcChHHHHHHHHhC
Confidence 99999999999999999864
No 81
>PLN02887 hydrolase family protein
Probab=99.97 E-value=1.2e-29 Score=301.15 Aligned_cols=234 Identities=17% Similarity=0.167 Sum_probs=166.9
Q ss_pred eeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCC-------EEEec
Q 001705 748 MLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFD-------AIVCN 820 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d-------~lI~~ 820 (1024)
++.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++.++.++++.+++. .++ ++||+
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGVFL 380 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEEee
Confidence 4557789999999998889999999999999998 9999999999999999999998763 233 46678
Q ss_pred CCceEEcCCCccccCcchhhhhcccCCchhHHHHHhh---------------------------hhhccCCCC-c-c-cc
Q 001705 821 SGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPR---------------------------VARAEDGAE-D-D-IV 870 (1024)
Q Consensus 821 nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~---------------------------~~~~~~~~~-~-~-~~ 870 (1024)
||+.||+.++... +...+ ..+.+..++.. +........ . + ..
T Consensus 381 NGA~I~d~~g~~I----~~~~L----~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l 452 (580)
T PLN02887 381 QGLLVYGRQGREI----YRSNL----DQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSV 452 (580)
T ss_pred cCeEEEECCCcEE----EEEeC----CHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCH
Confidence 9999996422211 00000 00111111100 000000000 0 0 00
Q ss_pred ccc-CCCCceEEEEEecCCCchhhHHHHHHHHHh-cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEE
Q 001705 871 GFV-DASSSRCQSYSIKPGAETRKVDNIRQRLRM-RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVV 948 (1024)
Q Consensus 871 ~~~-~~~~~~k~~~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vva 948 (1024)
... ......++.+.. ... ....++.+.+.. ....+.++.+... ++||+|+++|||.||++|++++||+++++||
T Consensus 453 ~~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI~~eeviA 528 (580)
T PLN02887 453 DQLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGVSPDEIMA 528 (580)
T ss_pred HHhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCCCHHHEEE
Confidence 000 012344554432 111 112334444432 2345788888876 9999999999999999999999999999999
Q ss_pred EeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhcc
Q 001705 949 FVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 949 fiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~ 1022 (1024)
| ||+.| | ++||+.+|+||||| ||.+++|++|+ +||.+|++|||+.+|+++-
T Consensus 529 F-GDs~N-D-IeMLe~AG~gVAMg----NA~eeVK~~Ad----------------~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 529 I-GDGEN-D-IEMLQLASLGVALS----NGAEKTKAVAD----------------VIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred E-ecchh-h-HHHHHHCCCEEEeC----CCCHHHHHhCC----------------EEeCCCCcCHHHHHHHHhh
Confidence 8 99999 9 99999999999999 99999999999 9999999999999999873
No 82
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=5.2e-28 Score=287.11 Aligned_cols=281 Identities=17% Similarity=0.220 Sum_probs=210.8
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.++||+|++.......+ ++.....+|+++++|+....... .......+...|. ......+.+|.||++|
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~----~~~~~~~~~~~y~------~~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESA----TNETYILWNNYYE------YQFSNADYIDFFITAT 278 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCcc----CcchhHHHHHHHH------HHHhchhhCCEEEECC
Confidence 36899999876433323 44555689999999963211100 0000000111111 1122357889999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+...++. ++...+++.+||+|++...+.+..
T Consensus 279 ~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~------------------------ 315 (500)
T TIGR02918 279 DIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ------------------------ 315 (500)
T ss_pred HHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc------------------------
Confidence 8777665443322 111224899999998654332211
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
......|+++||+.+.||++.+++|+..+. ...|++.| |+|+++. ...+.+++.+
T Consensus 316 -----------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~--~~~p~~~l~i~G~G~~-----------~~~l~~~i~~ 371 (500)
T TIGR02918 316 -----------ERKPFSIITASRLAKEKHIDWLVKAVVKAK--KSVPELTFDIYGEGGE-----------KQKLQKIINE 371 (500)
T ss_pred -----------ccCCeEEEEEeccccccCHHHHHHHHHHHH--hhCCCeEEEEEECchh-----------HHHHHHHHHH
Confidence 123457999999999999999999999985 45677777 7888763 3567788999
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhccCCcEEEeCCC
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPH 620 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G-g~~eii~~~~~Gllv~p~ 620 (1024)
+++.+.|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.| |++|+|.++.+|+++++.
T Consensus 372 ~~l~~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~ 444 (500)
T TIGR02918 372 NQAQDYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPID 444 (500)
T ss_pred cCCCCeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCC
Confidence 9999999999973 799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred ----C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 621 ----D----QNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 621 ----d----~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
| ++++|++|.+++. ++.++++++++++.++.|||+.++++|.++++++
T Consensus 445 ~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 445 EEEDDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred ccccchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999994 5678999999999889999999999999998753
No 83
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.96 E-value=1e-27 Score=269.90 Aligned_cols=346 Identities=22% Similarity=0.248 Sum_probs=245.9
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++++.. + ..||..+++.+|+++|.+.| |+|++++.......... .. ....
T Consensus 1 kIl~~~~~---------~----~~gG~~~~~~~l~~~l~~~g--~~v~v~~~~~~~~~~~~-----~~--------~~~~ 52 (353)
T cd03811 1 KILFVIPS---------L----GGGGAERVLLNLANGLDKRG--YDVTLVVLRDEGDYLEL-----LP--------SNVK 52 (353)
T ss_pred CeEEEeec---------c----cCCCcchhHHHHHHHHHhcC--ceEEEEEcCCCCccccc-----cc--------cchh
Confidence 58888854 1 27899999999999999999 99999988643221000 00 0000
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVP 329 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ip 329 (1024)
.......... .+. ...+ ...+.+.+.+ .+||+||+|.. ....++.+.... ++|
T Consensus 53 ~~~~~~~~~~----------~~~-~~~~-------~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~-~~~ 106 (353)
T cd03811 53 LIPVRVLKLK----------SLR-DLLA-------ILRLRRLLRK-------EKPDVVISHLTTTPNVLALLAARL-GTK 106 (353)
T ss_pred hhceeeeecc----------ccc-chhH-------HHHHHHHHHh-------cCCCEEEEcCccchhHHHHHHhhc-CCc
Confidence 0001110000 000 0011 1112222222 47999999987 555555544444 899
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
++++.|+......... .... ..+...+..+|.+++.|+...+.+...+..
T Consensus 107 ~i~~~~~~~~~~~~~~----------~~~~------~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-------------- 156 (353)
T cd03811 107 LIVWEHNSLSLELKRK----------LRLL------LLIRKLYRRADKIVAVSEGVKEDLLKLLGI-------------- 156 (353)
T ss_pred eEEEEcCcchhhhccc----------hhHH------HHHHhhccccceEEEeccchhhhHHHhhcC--------------
Confidence 9999998754322100 0000 124567899999999998887776554431
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
...++.+||||+|...+.+... +. . ......+++.|+++||+.+.
T Consensus 157 --------~~~~~~vi~~~~~~~~~~~~~~----------------------~~----~-~~~~~~~~~~i~~~g~~~~~ 201 (353)
T cd03811 157 --------PPDKIEVIYNPIDIEEIRALAE----------------------EP----L-ELGIPPDGPVILAVGRLSPQ 201 (353)
T ss_pred --------CccccEEecCCcChhhcCcccc----------------------hh----h-hcCCCCCceEEEEEecchhh
Confidence 1138999999999887754431 00 0 11223567899999999999
Q ss_pred CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
||++.+++|+..+.. ..+++.+ ++|+++. ...+.+.+.++++.++|.+.|+ .+++.++|+.|
T Consensus 202 k~~~~~i~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~~-- 264 (353)
T cd03811 202 KGFDTLIRAFALLRK--EGPDARLVILGDGPL-----------REELEALAKELGLADRVHFLGF--QSNPYPYLKAA-- 264 (353)
T ss_pred cChHHHHHHHHHhhh--cCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEEecc--cCCHHHHHHhC--
Confidence 999999999999964 2456665 6787654 2445578888999999999999 46899999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH---HHHHHHHHhCHHHHHHHHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAI---ADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l---a~aI~~ll~d~~~~~~~~~~ 645 (1024)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|.+++ +++|..++.+++.+++++.+
T Consensus 265 --d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 342 (353)
T cd03811 265 --DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAA 342 (353)
T ss_pred --CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 77888888899999999998
Q ss_pred HHHHH-hcCC
Q 001705 646 GLKNI-HRFS 654 (1024)
Q Consensus 646 ~~~~~-~~fs 654 (1024)
+++.+ ++|+
T Consensus 343 ~~~~~~~~~~ 352 (353)
T cd03811 343 ARERVAREYS 352 (353)
T ss_pred HHHHHHHHhc
Confidence 88776 5765
No 84
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=4.5e-28 Score=277.60 Aligned_cols=264 Identities=17% Similarity=0.242 Sum_probs=194.7
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhh---HHHHh-cCCCCc-chhhHHHHHHHHHHHHHhhhcCCE
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKF---EQLLK-QGRLPK-DINASYKIMRRIEAEELGLDASEM 377 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~---~~l~~-~g~~~~-~i~~~y~~~r~i~~e~~~l~~Ad~ 377 (1024)
.++|+||++...... .+....++|.+++.|+..+..+ ..+.. .+.... .....+..++ .++...++.+|.
T Consensus 82 ~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLR--IWDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHH--HHHHHHhcCCCE
Confidence 469999987642221 2224557999999997422111 11111 111111 0011112222 246778899999
Q ss_pred EEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccc
Q 001705 378 VVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQS 457 (1024)
Q Consensus 378 Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~ 457 (1024)
|++.|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999888876544332 568999999988774322
Q ss_pred cCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHH
Q 001705 458 KRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 458 ~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
..++.|+++||+.+.||++.+++|+..++ .++ +|+|+++..+ ++.+
T Consensus 193 -----------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~~-----------~l~~ 238 (351)
T cd03804 193 -----------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPELD-----------RLRA 238 (351)
T ss_pred -----------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhHH-----------HHHh
Confidence 23567999999999999999999998873 223 4778876422 2222
Q ss_pred HHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEe
Q 001705 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617 (1024)
Q Consensus 538 ~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv 617 (1024)
+..++|.|.|+++.+++.++|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|+++
T Consensus 239 -----~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~ 308 (351)
T cd03804 239 -----KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF 308 (351)
T ss_pred -----hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe
Confidence 445789999999999999999999 99999999 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001705 618 DPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNY 662 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 662 (1024)
+|.|+++++++|.+++++++ ..++++++.+++|+|+.+.+++
T Consensus 309 ~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 309 EEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred CCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 99999999999999999984 2344555556779999888765
No 85
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.4e-28 Score=283.04 Aligned_cols=440 Identities=20% Similarity=0.230 Sum_probs=293.1
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCC--C--
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPS--D-- 245 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~--~-- 245 (1024)
|||++++.+.. | -..+||..-.+..|.++|++.| ++|.|+.+... .+...+....+.+.... .
T Consensus 1 M~Il~v~~E~~--------p-~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF--------P-FVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec--------C-ccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 89999998743 2 3589999999999999999999 99999988754 22222222111110000 0
Q ss_pred -----C----CCCCCeEEEEecCCCCCCcccc--ccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCC-CCcceEEEEcCC
Q 001705 246 -----G----TGSCGAYIIRIPCGARDKYIAK--ESLWPYIHEFVDGALNHIVNMARAIGEQVNGGK-PTWPYVIHGHYA 313 (1024)
Q Consensus 246 -----~----~~~~gv~i~rip~~~~~~~~~k--~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~-~~~pDvIh~h~~ 313 (1024)
. ....++.+.-+.. + .++.. ...+.+........ .|..+..+.+..+. ...|||||+|+|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~-~--~~f~r~~~~~~~~~d~~~Rf~-----~F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDN-P--ALFKRPDSTLYGYYDNAERFA-----FFSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecC-h--hhcCccccccCCCCcHHHHHH-----HHHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 0 1011133333321 1 22222 13333333222211 22333333332221 147999999999
Q ss_pred ChHHHHHHHHcc----CCCCEEEEeCCCchhhhH---HHHhcCCCCcchhhHHHHH-----HHHHHHHHhhhcCCEEEeC
Q 001705 314 DAGEVAAHLSGA----LNVPMVLTGHSLGRNKFE---QLLKQGRLPKDINASYKIM-----RRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 314 ~~~~~a~~l~~~----~~ipiV~t~H~l~~~~~~---~l~~~g~~~~~i~~~y~~~-----r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
++++++.+++.. ..+|.|||+|++...... ..-..|. ++..|... -.+...+..+..||.|.++
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgL----p~~~~~~~~l~~~~~~~~lK~gi~~ad~vttV 215 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGL----PFEAYASFGLEFYGQISFLKGGLYYADAVTTV 215 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcC----CHHHhhhceeeecCcchhhhhhheeccEEEEE
Confidence 999999999984 479999999997332211 1111111 11111100 1122356678899999999
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1024)
|..++++++ .+.|...++..+..+. -++.-|-||+|.+.+.|... ..+...+.++.... -.
T Consensus 216 SptYa~Ei~--t~~~g~gl~g~l~~~~-----------~~l~GI~NgiD~~~wnp~~d----~~~~~~y~~~~~~~--k~ 276 (487)
T COG0297 216 SPTYAGEIY--TPEYGEGLEGLLSWRS-----------GKLSGILNGIDYDLWNPETD----PYIAANYSAEVLPA--KA 276 (487)
T ss_pred CHHHHHhhc--cccccccchhhhhhcc-----------ccEEEEEeeEEecccCcccc----cchhccCCccchhh--hH
Confidence 999999986 4556555555555443 28899999999999988763 22222222111110 00
Q ss_pred CcchHHHhhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHH
Q 001705 462 PPMWSEVMRFFTN--PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 462 p~~~~~~~~~~~~--~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
........++... .+.|++.++||++.+||++.+++++..+.+ ....+ +++|.++ ..+.+.+..+.
T Consensus 277 ~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~--~~~~~-vilG~gd---------~~le~~~~~la 344 (487)
T COG0297 277 ENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE--QGWQL-VLLGTGD---------PELEEALRALA 344 (487)
T ss_pred HHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHH--hCceE-EEEecCc---------HHHHHHHHHHH
Confidence 1112223344443 367999999999999999999999999953 33222 4778773 34567788888
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--------C
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--------L 611 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--------~ 611 (1024)
..+.. ++...-..+..-...+|+.| |++++||++||||++-++||++|+++|+..+||.+|.|.+ .
T Consensus 345 ~~~~~--~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~ 418 (487)
T COG0297 345 SRHPG--RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV 418 (487)
T ss_pred HhcCc--eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCc
Confidence 87764 55554444455567777778 9999999999999999999999999999999999998875 4
Q ss_pred CcEEEeCCCCHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhcC
Q 001705 612 NNGLLVDPHDQNAIADALLKLLA---DKNM-WSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRH 673 (1024)
Q Consensus 612 ~~Gllv~p~d~~~la~aI~~ll~---d~~~-~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~~ 673 (1024)
.+|+++.+.++++++.+|.+++. .++. |+.+..+++. ..|||+..+++|.+.|+.+++..
T Consensus 419 gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 419 GTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred eeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 78999999999999999998886 4444 9988888887 79999999999999999988643
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=3e-27 Score=273.09 Aligned_cols=333 Identities=16% Similarity=0.131 Sum_probs=221.8
Q ss_pred hHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcch
Q 001705 196 GQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYI 275 (1024)
Q Consensus 196 G~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~ 275 (1024)
|.+..+.+++..|+++|+ ++|+|+|.... +...+. ....|++++++|. +.... ....++..+
T Consensus 16 g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~--------~~~~~~-------~~~~~v~v~r~~~-~~~~~-~~~~~~~~~ 77 (371)
T PLN02275 16 GRSPRMQYHALSLARQAS-FQVDVVAYGGS--------EPIPAL-------LNHPSIHIHLMVQ-PRLLQ-RLPRVLYAL 77 (371)
T ss_pred CCCHHHHHHHHHHHhcCC-ceEEEEEecCC--------CCCHHH-------hcCCcEEEEECCC-ccccc-ccccchHHH
Confidence 455677889999999873 58999986421 111111 2235899999986 32111 111122211
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh---HHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 276 HEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA---GEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 276 ~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~---~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
.++.. .......+...+. .+ ..+||+||+|.... ...+.++++..++|+|++.|+++.. ....|...
T Consensus 78 ~~~~~-~~~~~~~~~~~~~--~~---~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~~~~~~~~ 147 (371)
T PLN02275 78 ALLLK-VAIQFLMLLWFLC--VK---IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT----LLALSLGR 147 (371)
T ss_pred HHHHH-HHHHHHHHHHHHH--hh---CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH----HHhcccCC
Confidence 11111 1011111111110 01 14799999997432 4456666767789999999987421 12222211
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
. ...+++++++ |+.+++.||.|+++|+...+.+...+ |+ ++.+||||. .+
T Consensus 148 ~--~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~-----------------g~--------~i~vi~n~~-~~ 197 (371)
T PLN02275 148 S--HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW-----------------GI--------RATVLYDQP-PE 197 (371)
T ss_pred C--CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc-----------------CC--------CeEEECCCC-HH
Confidence 1 1123344444 77789999999999998777643321 11 378999984 45
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc-------
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPL------- 505 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l------- 505 (1024)
.|.|... . ... ..+...+|+++||+.+.||++.+++|+..+...
T Consensus 198 ~f~~~~~----------------------~------~~~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~ 248 (371)
T PLN02275 198 FFRPASL----------------------E------IRL-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNE 248 (371)
T ss_pred HcCcCCc----------------------h------hcc-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccc
Confidence 5644331 0 000 112345788999999999999999999876310
Q ss_pred --------CCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe-CCCCCCCCHHHHHHHhhcCCcEEEe
Q 001705 506 --------RELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFIN 575 (1024)
Q Consensus 506 --------~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~-~g~~~~~el~~ly~~A~~~~dv~v~ 575 (1024)
...|++.+ |+|+|+. .++++++++++++.+ +.| .|+++.++++.+|+.| |++|+
T Consensus 249 ~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a----Dv~v~ 312 (371)
T PLN02275 249 SDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA----DLGVS 312 (371)
T ss_pred ccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----CEEEE
Confidence 23467776 8899875 356778889999976 666 5578999999999999 99998
Q ss_pred cC---CCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 576 PA---LVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 576 ps---~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
|+ ..|+||++++||||||+|||+++.||..|+|.++.+|++++ |+++++++|.+++
T Consensus 313 ~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 313 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred eccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 63 24899999999999999999999999999999999999996 7999999998875
No 87
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=1.3e-28 Score=271.82 Aligned_cols=233 Identities=12% Similarity=0.078 Sum_probs=159.5
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
..+|++||||||+++++.+++.++++|++++++ |+.|+|||||++.++.+++++++++ .+++||+||+.||..
T Consensus 7 ~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~~~ 79 (271)
T PRK03669 7 PLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQLD 79 (271)
T ss_pred CeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEEec
Confidence 346679999999998788899999999999998 9999999999999999999998873 247999999999975
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhhhhc-c------CCCC--------ccc--c--cccCCCCceEEEEEecCCC
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRVARA-E------DGAE--------DDI--V--GFVDASSSRCQSYSIKPGA 889 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~-~------~~~~--------~~~--~--~~~~~~~~~k~~~~~~~~~ 889 (1024)
.+.. ....+. ........+.+..++...... . .... ... . .........++.+. .+
T Consensus 80 ~~~~-~~~~~~-~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 154 (271)
T PRK03669 80 EQWQ-DHPDFP-RIISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWR-DS-- 154 (271)
T ss_pred Cccc-CCCCce-EeecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEec-CC--
Confidence 2100 000000 001111222333332221110 0 0000 000 0 00001112233222 11
Q ss_pred chhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCC---CCCCEEEEeCCCCCCChHHhhcCCC
Q 001705 890 ETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGI---DLSKMVVFVGEKGDTDYEDLLVGLH 966 (1024)
Q Consensus 890 ~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi---~~~~vvafiGDs~N~D~~~Ml~~ag 966 (1024)
.....++.+.+... .++++.+ +. ++||+|+++|||+||++|++++|+ ++++++|| ||+.| | ++||+.+|
T Consensus 155 -~~~~~~~~~~l~~~--~~~~~~~-~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viaf-GDs~N-D-i~Ml~~ag 226 (271)
T PRK03669 155 -DERMAQFTARLAEL--GLQFVQG-AR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGL-GDGPN-D-APLLDVMD 226 (271)
T ss_pred -HHHHHHHHHHHHHC--CCEEEec-Ce-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEE-cCCHH-H-HHHHHhCC
Confidence 22445666666543 4555553 33 899999999999999999999999 99999998 99999 9 99999999
Q ss_pred ceEEecCCCCCChH-H-----HhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 967 KTLILRGSVMYGSE-K-----LLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 967 ~gVaMgna~~NA~~-e-----lk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
+||||| |+.+ . ++..++ |+|...++||+.++|+++
T Consensus 227 ~gvAM~----~~~~~~~~l~~~~~~~~----------------~~~~~~~~~g~~~~l~~~ 267 (271)
T PRK03669 227 YAVVVK----GLNREGVHLQDDDPARV----------------YRTQREGPEGWREGLDHF 267 (271)
T ss_pred EEEEec----CCCCCCcccccccCCce----------------EeccCCCcHHHHHHHHHH
Confidence 999999 5552 1 444666 999999999999999987
No 88
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=6.9e-27 Score=272.79 Aligned_cols=381 Identities=16% Similarity=0.157 Sum_probs=243.1
Q ss_pred ccccccc---CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCC
Q 001705 159 IWSEDDK---SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGE 235 (1024)
Q Consensus 159 ~~~~~~~---~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~ 235 (1024)
-|++..+ .+.+-.|.++++-.+ |--||-.+.-.. =|..|++.|+ ++|+++.+-....+-..-|+.
T Consensus 309 ~~~~~~~~~~~~~~r~~~ivTtAsl----------PWmTGtavnpL~-rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~ 376 (794)
T PLN02501 309 FWTDSSKHELSDGKRHVAIVTTASL----------PWMTGTAVNPLF-RAAYLAKSAK-QNVTLLVPWLCKSDQELVYPN 376 (794)
T ss_pred cccCccccccccCCCeEEEEEcccC----------cccccccccHHH-HHHHhcccCC-ceEEEEEecCCccccccccCC
Confidence 4777663 223457999997765 356777766654 3567888865 999998775432111111221
Q ss_pred ------CccccC---CCC--CCCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 001705 236 ------PNEMLS---CPS--DGTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTW 304 (1024)
Q Consensus 236 ------~~e~l~---~~~--~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~ 304 (1024)
|.+..+ ... ..+-.++..|...|.. .-..+.++.|. -.+.+.+.. +.
T Consensus 377 ~~~F~~p~eQe~~ir~wl~~r~g~~~~~~i~fYpg~---~~~~~~SI~p~------------gdI~~~L~~-------f~ 434 (794)
T PLN02501 377 NLTFSSPEEQESYIRNWLEERIGFKADFKISFYPGK---FSKERRSIIPA------------GDTSQFIPS-------KD 434 (794)
T ss_pred CcccCCHHHHHHHHHHHHHHhcCCCCCceEEeecch---hccCCccccch------------HHHHHHhhc-------cC
Confidence 111100 000 0011233344433321 01112223221 111222222 68
Q ss_pred ceEEEEcCC-ChHHH--HHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhh-cCCEEEe
Q 001705 305 PYVIHGHYA-DAGEV--AAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD-ASEMVVT 380 (1024)
Q Consensus 305 pDvIh~h~~-~~~~~--a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~-~Ad~Vi~ 380 (1024)
|||||++.+ ..++. +...+++++ |+|.++|.-...+..++. .|.... ..+++.++ .+.+ +||.|++
T Consensus 435 PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~-~g~L~~---~llk~l~~-----~v~r~hcD~VIa 504 (794)
T PLN02501 435 ADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREK-NGALQA---FFVKHINN-----WVTRAYCHKVLR 504 (794)
T ss_pred CCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhc-chhHHH---HHHHHHHH-----HHHHhhCCEEEc
Confidence 999999987 56777 888888888 999999977655443331 121111 01111111 1111 2899999
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
.|.... .+ .. ++....+|||++.|.|... .
T Consensus 505 PS~atq-~L----~~-------------------------~vI~nVnGVDte~F~P~~r---~----------------- 534 (794)
T PLN02501 505 LSAATQ-DL----PK-------------------------SVICNVHGVNPKFLKIGEK---V----------------- 534 (794)
T ss_pred CCHHHH-Hh----cc-------------------------cceeecccccccccCCcch---h-----------------
Confidence 995443 21 00 1122226999999987652 0
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLI 539 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i 539 (1024)
....++......+.++|+||+.+.||++.||+|+..+. .+.+++.| |+|+|+. ..++.+++
T Consensus 535 -----~~~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~--~~~pnvrLvIVGDGP~-----------reeLe~la 596 (794)
T PLN02501 535 -----AEERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHK--NELDGFNLDVFGNGED-----------AHEVQRAA 596 (794)
T ss_pred -----HHHHhcCCccccCceEEEEcccccCCHHHHHHHHHHHH--hhCCCeEEEEEcCCcc-----------HHHHHHHH
Confidence 00112222233456899999999999999999999885 34467766 8899886 34566777
Q ss_pred HHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC
Q 001705 540 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP 619 (1024)
Q Consensus 540 ~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p 619 (1024)
.++++ .|.|+|. .++..++|+.+ ||||+||.+|+||++++||||||+|||+++.||. +++.++.+|+++
T Consensus 597 ~eLgL--~V~FLG~--~dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~-- 665 (794)
T PLN02501 597 KRLDL--NLNFLKG--RDHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY-- 665 (794)
T ss_pred HHcCC--EEEecCC--CCCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--
Confidence 87877 4889988 46677899999 9999999999999999999999999999999985 446677788876
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 620 HDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
.|+++++++|.++++++..+..+. ....|||+..++++++.-+
T Consensus 666 ~D~EafAeAI~~LLsd~~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 666 KTSEDFVAKVKEALANEPQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred CCHHHHHHHHHHHHhCchhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 599999999999999887443322 1348999999999987654
No 89
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.96 E-value=3.7e-28 Score=264.06 Aligned_cols=223 Identities=15% Similarity=0.224 Sum_probs=164.7
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCc
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRD 831 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~ 831 (1024)
|++|+||||++++..++++++++|++++++ |+.|++||||++..+..++..+++ .+++||+||+.|+...+.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~----~~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGI----DDYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTH----CSEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccc----hhhhcccccceeeecccc
Confidence 579999999998888999999999999998 999999999999999999999887 368999999999544232
Q ss_pred cccCcchhhhhcccCCchhHHHHHhhhhhc----------------------------cCCCCc--ccccccCCCCceEE
Q 001705 832 MVADGDYEAHVEYRWPGENVRSVVPRVARA----------------------------EDGAED--DIVGFVDASSSRCQ 881 (1024)
Q Consensus 832 ~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~----------------------------~~~~~~--~~~~~~~~~~~~k~ 881 (1024)
.... ..+ ..+.+..++...... ...... ............++
T Consensus 73 ~l~~----~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki 144 (254)
T PF08282_consen 73 ILYE----KPI----DSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKI 144 (254)
T ss_dssp EEEE----ESB-----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEE
T ss_pred cchh----hhe----eccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceee
Confidence 1100 000 011111111111000 000000 00011123455677
Q ss_pred EEEecCCCchhhHHHHHHHHHhc-CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHH
Q 001705 882 SYSIKPGAETRKVDNIRQRLRMR-GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYED 960 (1024)
Q Consensus 882 ~~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~ 960 (1024)
.+..+ ...++++.+.|... ...+.++.+... ++||+|+++|||.||++|++++|++++++++| ||+.| | ++
T Consensus 145 ~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~-GD~~N-D-~~ 216 (254)
T PF08282_consen 145 LFFPD----PEDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIAF-GDSEN-D-IE 216 (254)
T ss_dssp EEESC----HHHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEEE-ESSGG-G-HH
T ss_pred ecccc----chhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEEe-ecccc-c-Hh
Confidence 75432 23455666666544 233577778786 99999999999999999999999999999998 99999 9 99
Q ss_pred hhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHH
Q 001705 961 LLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAAL 1018 (1024)
Q Consensus 961 Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL 1018 (1024)
||+.+|+||||+ ||.++++..|+ ++|..+.+|||+++|
T Consensus 217 Ml~~~~~~~am~----na~~~~k~~a~----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 217 MLELAGYSVAMG----NATPELKKAAD----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp HHHHSSEEEEET----TS-HHHHHHSS----------------EEESSGTCTHHHHHH
T ss_pred HHhhcCeEEEEc----CCCHHHHHhCC----------------EEecCCCCChHHHhC
Confidence 999999999999 99999999999 999999999999986
No 90
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.96 E-value=2.4e-28 Score=270.02 Aligned_cols=229 Identities=11% Similarity=0.117 Sum_probs=161.1
Q ss_pred EEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC-
Q 001705 750 IVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP- 828 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~- 828 (1024)
.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+.++++.+++. .++||+||+.|++.
T Consensus 4 kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~~ 75 (272)
T PRK10530 4 RVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDYQ 75 (272)
T ss_pred cEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEecC
Confidence 47779999999998888999999999999998 9999999999999999999998873 35999999999964
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhh------------------------------hhccCCC-Ccccc--cc---
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRV------------------------------ARAEDGA-EDDIV--GF--- 872 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~------------------------------~~~~~~~-~~~~~--~~--- 872 (1024)
++..... ..+ ..+.+..++... ....... ..... .+
T Consensus 76 ~~~~l~~----~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T PRK10530 76 AKKVLEA----DPL----PVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQ 147 (272)
T ss_pred CCEEEEe----cCC----CHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHH
Confidence 2221100 000 001111111000 0000000 00000 00
Q ss_pred --cCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEe
Q 001705 873 --VDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFV 950 (1024)
Q Consensus 873 --~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafi 950 (1024)
......+++.... .. ....+++.+.+... ..+.++.+... ++||+|.++|||.||+++++++|++++++++|
T Consensus 148 ~~~~~~~~~~i~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~- 221 (272)
T PRK10530 148 AARQVNAIWKFALTH--ED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVAF- 221 (272)
T ss_pred HHhhcCCcEEEEEec--CC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEEe-
Confidence 0011223332221 11 11233444444332 22445555554 89999999999999999999999999999998
Q ss_pred CCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhcc
Q 001705 951 GEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAIK 1022 (1024)
Q Consensus 951 GDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~~ 1022 (1024)
||+.| | ++||+.+|+||||| ||.+++|+.|+ +++.++++|||+.+|+++-
T Consensus 222 GD~~N-D-i~m~~~ag~~vamg----na~~~lk~~Ad----------------~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 222 GDNFN-D-ISMLEAAGLGVAMG----NADDAVKARAD----------------LVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCChh-h-HHHHHhcCceEEec----CchHHHHHhCC----------------EEEecCCCCcHHHHHHHHh
Confidence 99999 9 99999999999999 99999999999 9999999999999999873
No 91
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.95 E-value=1.3e-27 Score=261.77 Aligned_cols=224 Identities=16% Similarity=0.179 Sum_probs=161.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++.+++++.++|++++++ |+.|+|||||++..+.++++.+++. .++||+||+.|++.++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 4679999999998888999999999999998 9999999999999999999998773 3799999999998632
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhcc---------------------------CCCCcccccc---cCCCCceE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAE---------------------------DGAEDDIVGF---VDASSSRC 880 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~---------------------------~~~~~~~~~~---~~~~~~~k 880 (1024)
... +...+ ..+.+..++..+.... .......... .......+
T Consensus 73 ~~i----~~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (256)
T TIGR00099 73 EIL----YKKPL----DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKI 144 (256)
T ss_pred CEE----eecCC----CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceE
Confidence 211 11101 1111111111110000 0000000000 00111222
Q ss_pred EEEEecCCCchhhHHHHHHHHHh--cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCh
Q 001705 881 QSYSIKPGAETRKVDNIRQRLRM--RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDY 958 (1024)
Q Consensus 881 ~~~~~~~~~~~~~~~el~~~L~~--~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~ 958 (1024)
+.+. .+. ...+++.+.+.. ....+.++.+.+. ++||+|.++|||.||+++++++|++++++++| ||+.| |
T Consensus 145 ~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~-GD~~n-D- 216 (256)
T TIGR00099 145 LLLF-LDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIAF-GDGMN-D- 216 (256)
T ss_pred EEEE-CCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEEe-CCcHH-h-
Confidence 2222 222 234556555542 2345777788776 99999999999999999999999999999998 99999 9
Q ss_pred HHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHH
Q 001705 959 EDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAAL 1018 (1024)
Q Consensus 959 ~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL 1018 (1024)
++||+.+|.+|||+ ||++++++.|+ +++.++++|||+.+|
T Consensus 217 ~~m~~~~~~~~a~~----na~~~~k~~a~----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 217 IEMLEAAGYGVAMG----NADEELKALAD----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred HHHHHhCCceeEec----CchHHHHHhCC----------------EEecCCCCcchhhhC
Confidence 99999999999999 99999999999 999999999999875
No 92
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.95 E-value=1.8e-27 Score=260.64 Aligned_cols=229 Identities=14% Similarity=0.090 Sum_probs=161.4
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++...+.++++|++++++ |+.|++||||++..+..+++.+++ ++++||+||+.|++.++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 4679999998888663444699999999987 999999999999999999999887 36899999999998532
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccC----CCCc-----------ccc---cccCCCCceEEEEEecCCCchh
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAED----GAED-----------DIV---GFVDASSSRCQSYSIKPGAETR 892 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~----~~~~-----------~~~---~~~~~~~~~k~~~~~~~~~~~~ 892 (1024)
....+..| .....|..+.++.++..+..... .... ... .........++.+. +. .
T Consensus 73 ~~~~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~ 145 (256)
T TIGR01486 73 WFTEPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW--SE---E 145 (256)
T ss_pred cccCCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec--Ch---H
Confidence 11111011 12333444555555443221100 0000 000 00000111222222 11 2
Q ss_pred hHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCC--CCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 893 KVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGID--LSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 893 ~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~--~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
....+.+.+...+ +.++.+. . ++||+|+++|||.||++|++++|++ .+++++| ||+.| | ++||+.+|+|||
T Consensus 146 ~~~~~~~~~~~~~--~~~~~s~-~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~-GD~~N-D-~~Ml~~ag~~va 218 (256)
T TIGR01486 146 RRERFTEALVELG--LEVTHGN-R-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGL-GDSPN-D-LPLLEVVDLAVV 218 (256)
T ss_pred HHHHHHHHHHHcC--CEEEeCC-c-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEE-cCCHh-h-HHHHHHCCEEEE
Confidence 3455666665432 4555543 4 9999999999999999999999999 9999998 99999 9 999999999999
Q ss_pred ecCCCCCCh---HHHhcc---cccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 971 LRGSVMYGS---EKLLHG---EDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 971 Mgna~~NA~---~elk~~---ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
|+ ||. +++|+. ++ +||.++++|||+++|++|
T Consensus 219 m~----Na~~~~~~lk~~~~a~~----------------~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 219 VP----GPNGPNVSLKPGDPGSF----------------LLTPAPGPEGWREALEHL 255 (256)
T ss_pred eC----CCCCCccccCccCCCcE----------------EEcCCCCcHHHHHHHHHh
Confidence 99 887 478886 45 899999999999999986
No 93
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=3.4e-26 Score=265.51 Aligned_cols=324 Identities=15% Similarity=0.203 Sum_probs=209.8
Q ss_pred CcceEEEEcCCChHHHHHHHH-ccCCCCEEEEeCCCchhhhHHHHhcCC--CCcc--------hhhHHHHHHHHHHHHHh
Q 001705 303 TWPYVIHGHYADAGEVAAHLS-GALNVPMVLTGHSLGRNKFEQLLKQGR--LPKD--------INASYKIMRRIEAEELG 371 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~-~~~~ipiV~t~H~l~~~~~~~l~~~g~--~~~~--------i~~~y~~~r~i~~e~~~ 371 (1024)
..+||+|+|+|+++..+..++ ...++|+|||.|.+..... +..|. +... .-..+.+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 469999999999999999999 5578999999998632211 01121 0000 00112233444458889
Q ss_pred hhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCcccccccc
Q 001705 372 LDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIG 451 (1024)
Q Consensus 372 l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~ 451 (1024)
...||.|+++|+....+...+|+. +..+ |||||+|...|.+..+ . ..++.
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~pd~--ViPNGid~~~f~~~~e--~-~~~~~--- 273 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KPDV--VLPNGLNVKKFSALHE--F-QNLHA--- 273 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CCCE--EeCCCcchhhcccchh--h-hhhhH---
Confidence 999999999999888887777543 2223 9999999999865431 0 00000
Q ss_pred CccccccCCCCcchH-----HHhhhhCCCCCcEEEE-EeCCCC-CCCHHHHHHHHhhccccCCC--Cc--E-EEE-EecC
Q 001705 452 NDRTQSKRNLPPMWS-----EVMRFFTNPHKPTILA-LSRPDP-KKNVTTLLKAFGECQPLREL--AN--M-TLI-LGNR 518 (1024)
Q Consensus 452 ~~~~~~~~~~p~~~~-----~~~~~~~~~~~~~Il~-vgRld~-~Kgi~~ll~A~~~l~~l~~~--~~--l-~LI-vG~~ 518 (1024)
.....+.. ...++...+++++++| +||+.+ .||++.+|+|+.++....+. .+ + .+| +-..
T Consensus 274 -------~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~ 346 (590)
T cd03793 274 -------QSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAK 346 (590)
T ss_pred -------HhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCc
Confidence 00011111 1223344578888888 799999 99999999999998642222 21 2 233 2111
Q ss_pred ---CCcccccc---------cchHHH------------------------------------------------------
Q 001705 519 ---DDIEDMSN---------SSSVVL------------------------------------------------------ 532 (1024)
Q Consensus 519 ---~~~~~l~~---------~~~~~~------------------------------------------------------ 532 (1024)
...+.++. ...++.
T Consensus 347 ~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~ 426 (590)
T cd03793 347 TNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDD 426 (590)
T ss_pred cCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcC
Confidence 11111111 001111
Q ss_pred --HHHHHHHHHcCCCCC------EEe-CCCCCCC------CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEE
Q 001705 533 --TTVLKLIDKYDLYGQ------VAY-PKHHKQS------DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVV 597 (1024)
Q Consensus 533 --~~i~~~i~~~~l~~~------V~~-~g~~~~~------el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVV 597 (1024)
..|...+.+.++.++ |.| +-+++.. +..++|+.| |++|+||++||||++++||||||+|||
T Consensus 427 ~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI 502 (590)
T cd03793 427 ANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSI 502 (590)
T ss_pred ccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEE
Confidence 111222222223222 334 3344333 478999999 999999999999999999999999999
Q ss_pred EcCCCCc----hhhhccC-CcEEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHHhcCCHHHHHHHHH
Q 001705 598 ATKNGGP----VDILKAL-NNGLLVD-------PHDQNAIADALLKLLADKNMWSECRKNGL--KNIHRFSWPEHCRNYL 663 (1024)
Q Consensus 598 at~~Gg~----~eii~~~-~~Gllv~-------p~d~~~la~aI~~ll~d~~~~~~~~~~~~--~~~~~fsw~~~a~~~l 663 (1024)
+|+.+|. .|++.++ ..|++|. +.++++|+++|.+++.. +.++.+..+++ +..+.|+|++.+..|.
T Consensus 503 ~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~ 581 (590)
T cd03793 503 TTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYR 581 (590)
T ss_pred EccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999988 5665544 3578776 45678899999998854 45666666655 5557999999999999
Q ss_pred HHHHHhhh
Q 001705 664 SHVEHSRN 671 (1024)
Q Consensus 664 ~~~~~~~~ 671 (1024)
+.+...+.
T Consensus 582 ~A~~~Al~ 589 (590)
T cd03793 582 KARQLALS 589 (590)
T ss_pred HHHHHHhh
Confidence 99987654
No 94
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.95 E-value=7.7e-27 Score=248.89 Aligned_cols=213 Identities=16% Similarity=0.217 Sum_probs=155.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||+++++.+++.++++|+++++. |+.|+|||||++..+..+++.+++. .++||+||+.|++..+
T Consensus 3 ~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~~ 74 (215)
T TIGR01487 3 LVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNKE 74 (215)
T ss_pred EEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCCC
Confidence 6779999999988888999999999999987 9999999999999999999998763 3699999999998621
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEE
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNL 910 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v 910 (1024)
.. .+.. ....|........ .+... .... ............ .. ..+.+.+.++..+ +.+
T Consensus 75 ~~----~~~~-~~~~~~~~~~~~~--~~~~~-------~~~~--~~~~~~~~~~~~-~~---~~~~~~~~l~~~~--~~~ 132 (215)
T TIGR01487 75 DI----FLAN-MEEEWFLDEEKKK--RFPRD-------RLSN--EYPRASLVIMRE-GK---DVDEVREIIKERG--LNL 132 (215)
T ss_pred cE----EEec-ccchhhHHHhhhh--hhhhh-------hccc--ccceeEEEEecC-Cc---cHHHHHHHHHhCC--eEE
Confidence 11 1110 0001100000000 00000 0000 000111222221 21 2345566665433 444
Q ss_pred EEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 911 VYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 911 ~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
..+ +. ++||+|.++|||.|++++++++|++++++++| ||+.| | ++||+.+|+||||+ ||.+++|+.|+
T Consensus 133 ~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i-GDs~N-D-~~ml~~ag~~vam~----na~~~~k~~A~--- 200 (215)
T TIGR01487 133 VDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI-GDSEN-D-IDLFRVVGFKVAVA----NADDQLKEIAD--- 200 (215)
T ss_pred Eec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEEE-CCCHH-H-HHHHHhCCCeEEcC----CccHHHHHhCC---
Confidence 444 44 89999999999999999999999999999998 99999 9 99999999999999 99999999999
Q ss_pred CCCccCCCCCCeeEeccccChhHHHHHH
Q 001705 991 REDVVPPDSPNIAYIEESYEPQDLSAAL 1018 (1024)
Q Consensus 991 ~~~v~~~~~~~~~~vt~~~~~dgI~~aL 1018 (1024)
|+|.+++++||+++|
T Consensus 201 -------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 201 -------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred -------------EEcCCCCCchhhhhC
Confidence 999999999999875
No 95
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=5.7e-26 Score=262.28 Aligned_cols=273 Identities=24% Similarity=0.319 Sum_probs=209.5
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.++|++++|....... ..+......+.++++|+....... ......+...|+ . ....+..+|.|++.|
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~-----~~~~~~~~~~~~---~---~~~~~~~~d~ii~~s 165 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNN-----DPVHSLINNFYE---Y---VFENLDKVDGVIVAT 165 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcc-----cccccccchhhH---H---HHhChhhCCEEEEcc
Confidence 3689999987654443 234444467789999964221110 000001111111 1 123467899999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+...++. ..++.+||+|++...+.+...
T Consensus 166 ~~~~~~l~~~~~~-----------------------~~~v~~ip~g~~~~~~~~~~~----------------------- 199 (372)
T cd04949 166 EQQKQDLQKQFGN-----------------------YNPIYTIPVGSIDPLKLPAQF----------------------- 199 (372)
T ss_pred HHHHHHHHHHhCC-----------------------CCceEEEcccccChhhcccch-----------------------
Confidence 9887776554332 015899999999876643210
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
....++.|+++||+.+.||++.+++|+..+. ...|++.| |+|.++. ...+..++..
T Consensus 200 ----------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~--~~~~~~~l~i~G~g~~-----------~~~~~~~~~~ 256 (372)
T cd04949 200 ----------KQRKPHKIITVARLAPEKQLDQLIKAFAKVV--KQVPDATLDIYGYGDE-----------EEKLKELIEE 256 (372)
T ss_pred ----------hhcCCCeEEEEEccCcccCHHHHHHHHHHHH--HhCCCcEEEEEEeCch-----------HHHHHHHHHH
Confidence 1134678999999999999999999999985 34566666 6787654 2345667788
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhccCCcEEEeCCC
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG-GPVDILKALNNGLLVDPH 620 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G-g~~eii~~~~~Gllv~p~ 620 (1024)
+++.++|.|.|+ .+++..+|+.| |++|+||..||||++++||||||+|||+++.| |+.+++.++.+|++++++
T Consensus 257 ~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~ 330 (372)
T cd04949 257 LGLEDYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKG 330 (372)
T ss_pred cCCcceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCC
Confidence 899999999995 67899999999 99999999999999999999999999999987 899999999999999999
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 001705 621 DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNY 662 (1024)
Q Consensus 621 d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~ 662 (1024)
|+++++++|.+++++++.++++++++++.+++|||+.++++|
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999999999999999999999999999998899999998764
No 96
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=6.1e-26 Score=256.63 Aligned_cols=255 Identities=16% Similarity=0.141 Sum_probs=183.5
Q ss_pred EcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHh-hhcCCEEEeCCHHHHHH
Q 001705 310 GHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELG-LDASEMVVTSTRQEIEM 388 (1024)
Q Consensus 310 ~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~-l~~Ad~Vi~~S~~~~~~ 388 (1024)
.|.....+..+......++|+|++.|+.. ++.+. ++... .+.+|.|++.|+...+.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~---------------------~l~~~--~~~~~~~~~ad~ii~~S~~~~~~ 108 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTD---------------------AISHT--ALYFFRNQPVDEIVVPSQWSKNA 108 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeec---------------------hhhHH--HHHHHhhccCCEEEECCHHHHHH
Confidence 45444444444444556899999999731 11122 24445 67899999999987776
Q ss_pred HHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHH
Q 001705 389 QWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEV 468 (1024)
Q Consensus 389 ~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 468 (1024)
+.... +. ...++.+||||+|.+.|.+...
T Consensus 109 l~~~g------------------~~----~~~~i~vIpNGVd~~~f~~~~~----------------------------- 137 (331)
T PHA01630 109 FYTSG------------------LK----IPQPIYVIPHNLNPRMFEYKPK----------------------------- 137 (331)
T ss_pred HHHcC------------------CC----CCCCEEEECCCCCHHHcCCCcc-----------------------------
Confidence 43321 00 0128999999999988754331
Q ss_pred hhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCC
Q 001705 469 MRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQ 547 (1024)
Q Consensus 469 ~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~ 547 (1024)
...+..+|++.|++.+.||++.+++|+..+.+ +.+++.+ ++|++.. +. ++ .++.+
T Consensus 138 ----~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~--~~~~~~llivG~~~~--~~---------~l------~~~~~- 193 (331)
T PHA01630 138 ----EKPHPCVLAILPHSWDRKGGDIVVKIFHELQN--EGYDFYFLIKSSNML--DP---------RL------FGLNG- 193 (331)
T ss_pred ----ccCCCEEEEEeccccccCCHHHHHHHHHHHHh--hCCCEEEEEEeCccc--ch---------hh------ccccc-
Confidence 01234566677789999999999999999853 3456665 6675432 10 01 12222
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC--------
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP-------- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p-------- 619 (1024)
+.+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.||+++++
T Consensus 194 --~~~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~ 267 (331)
T PHA01630 194 --VKTPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWY 267 (331)
T ss_pred --eeccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccc
Confidence 34567889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred -----------CCHHHHHHHHHHHHhCH--HHHHHH-HHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 620 -----------HDQNAIADALLKLLADK--NMWSEC-RKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 620 -----------~d~~~la~aI~~ll~d~--~~~~~~-~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
.|.+++++++.+++.++ +.++++ ..+++...++|||+.++++|+++|++
T Consensus 268 ~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 268 TNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 27788999999999873 444444 44444445899999999999999864
No 97
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=249.07 Aligned_cols=344 Identities=18% Similarity=0.164 Sum_probs=239.0
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++.+ .||.++...+|+++|.++| |+|++++.... +. .... ..
T Consensus 2 ~~i~i~~~g---------------~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~~-----~~~~----------~~ 48 (357)
T PRK00726 2 KKILLAGGG---------------TGGHVFPALALAEELKKRG--WEVLYLGTARG-ME-----ARLV----------PK 48 (357)
T ss_pred cEEEEEcCc---------------chHhhhHHHHHHHHHHhCC--CEEEEEECCCc-hh-----hhcc----------cc
Confidence 888888743 5799999999999999999 99999988531 10 0011 11
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCC
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
.|+++++++.... .....+..+..+. ..+....++.+.+.+ .+||+||+|.+.....+.++++..++|
T Consensus 49 ~g~~~~~~~~~~~----~~~~~~~~l~~~~-~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p 116 (357)
T PRK00726 49 AGIEFHFIPSGGL----RRKGSLANLKAPF-KLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAARLLGIP 116 (357)
T ss_pred CCCcEEEEeccCc----CCCChHHHHHHHH-HHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHHHHcCCC
Confidence 3888888886322 1111111111111 112222233333333 579999999876666666777778999
Q ss_pred EEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhh
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQ 409 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~ 409 (1024)
+|++.|+..+. .. ++..+..+|.+++++++... . .
T Consensus 117 ~v~~~~~~~~~--------------------~~-----~r~~~~~~d~ii~~~~~~~~---~----~------------- 151 (357)
T PRK00726 117 LVIHEQNAVPG--------------------LA-----NKLLARFAKKVATAFPGAFP---E----F------------- 151 (357)
T ss_pred EEEEcCCCCcc--------------------HH-----HHHHHHHhchheECchhhhh---c----c-------------
Confidence 99988754211 01 23356688999998874321 1 0
Q ss_pred cCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCC
Q 001705 410 RGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPK 489 (1024)
Q Consensus 410 ~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~ 489 (1024)
+..++.++|||+|.+.+.+... ..++...++.++|+++|+..+.
T Consensus 152 --------~~~~i~vi~n~v~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~gg~~~~ 195 (357)
T PRK00726 152 --------FKPKAVVTGNPVREEILALAAP----------------------------PARLAGREGKPTLLVVGGSQGA 195 (357)
T ss_pred --------CCCCEEEECCCCChHhhcccch----------------------------hhhccCCCCCeEEEEECCcHhH
Confidence 1138999999999875532110 0112223567889999999888
Q ss_pred CCHHHHH-HHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 490 KNVTTLL-KAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 490 Kgi~~ll-~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
|++..++ +|+.++.. .+...+++|+++. +.+.+..+ +++. |.|.|++ +++.++|..|
T Consensus 196 ~~~~~~l~~a~~~~~~---~~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~-- 253 (357)
T PRK00726 196 RVLNEAVPEALALLPE---ALQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA-- 253 (357)
T ss_pred HHHHHHHHHHHHHhhh---CcEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC--
Confidence 8876665 99988742 2433346687652 33444444 6663 8999996 7899999999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhccCCcEEEeCCCC--HHHHHHHHHHHHhCHHH
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG--------PVDILKALNNGLLVDPHD--QNAIADALLKLLADKNM 638 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg--------~~eii~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~ 638 (1024)
|++|.++- +.+++|||+||+|+|++..++ ..+.+.+.+.|+++++.| +++++++|.+++.+++.
T Consensus 254 --d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 327 (357)
T PRK00726 254 --DLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPER 327 (357)
T ss_pred --CEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHH
Confidence 99998762 689999999999999987643 235677778899999888 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 001705 639 WSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 639 ~~~~~~~~~~~~~~fsw~~~a~~~l~~~~ 667 (1024)
++++++++++..+.++...+++.+++.++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 328 LEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999999998889999999999888764
No 98
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.93 E-value=2.8e-25 Score=245.56 Aligned_cols=234 Identities=12% Similarity=0.136 Sum_probs=158.8
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+|++|+||||+++++.+++.++++|++++++ |+.|+|||||++..+..+++.+++. +++||.||+.||++
T Consensus 4 ~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~~ 75 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYIP 75 (273)
T ss_pred ceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEec
Confidence 447779999999987778889999999999987 9999999999999999999998873 46999999999975
Q ss_pred CCcc--------ccCcchhhhhcccCCchhHHHHHhhhhhccC----CCCc-----------cccc--ccCCCCceEEEE
Q 001705 829 WRDM--------VADGDYEAHVEYRWPGENVRSVVPRVARAED----GAED-----------DIVG--FVDASSSRCQSY 883 (1024)
Q Consensus 829 ~~~~--------~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~----~~~~-----------~~~~--~~~~~~~~k~~~ 883 (1024)
++.. ..+..|. .......+.+..++..+..... .... +..+ ........+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 76 KNYFPFQPDGERLKGDYWV--IELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccccCCccccccCCceE--EEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 2110 0000010 1111122333333322211000 0000 0000 000011111112
Q ss_pred E-ecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCC-CCEEEEeCCCCCCChHHh
Q 001705 884 S-IKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDL-SKMVVFVGEKGDTDYEDL 961 (1024)
Q Consensus 884 ~-~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~-~~vvafiGDs~N~D~~~M 961 (1024)
. ... ....+.+.+.+...+ +.++.+ + .++||+|.+ |||.|+++|++++|+++ +++++| ||+.| | ++|
T Consensus 154 ~~~~~---~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~-GDs~N-D-i~m 222 (273)
T PRK00192 154 LWNGS---EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIAL-GDSPN-D-LPM 222 (273)
T ss_pred eecCc---hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEE-cCChh-h-HHH
Confidence 2 111 224556666665433 444443 4 499999999 99999999999999999 999998 99999 9 999
Q ss_pred hcCCCceEEecCCCCCChHHHh----ccc-ccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 962 LVGLHKTLILRGSVMYGSEKLL----HGE-DAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 962 l~~ag~gVaMgna~~NA~~elk----~~a-d~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
|+.+|++|||+ ||.+++| ++| + .++++.++.+|||+.+|+++
T Consensus 223 ~~~ag~~vam~----NA~~~~k~~~~~~a~~--------------~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 223 LEAADIAVVVP----GPDGPNPPLLPGIADG--------------EFILASAPGPEGWAEAINKL 269 (273)
T ss_pred HHhCCeeEEeC----CCCCCCcccCccccCC--------------ceEEecCCCcHHHHHHHHHH
Confidence 99999999999 9999988 555 3 22445889999999999984
No 99
>PHA01633 putative glycosyl transferase group 1
Probab=99.93 E-value=1.2e-23 Score=235.49 Aligned_cols=221 Identities=14% Similarity=0.214 Sum_probs=162.4
Q ss_pred hhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCcccccccc
Q 001705 372 LDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIG 451 (1024)
Q Consensus 372 l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~ 451 (1024)
+...+.+|++|+...+.+... |+. . . .+||+|+|++.|.+... .
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~~-----~-~-i~I~~GVD~~~f~p~~~--~--------- 133 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GLQ-----V-D-LPVFHGINFKIVENAEK--L--------- 133 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CCC-----C-c-eeeeCCCChhhcCccch--h---------
Confidence 344568899998777765432 111 1 3 34789999998865431 0
Q ss_pred CccccccCCCCcchHHHhhhhC-CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCC--cEEE-EEecCCCccccccc
Q 001705 452 NDRTQSKRNLPPMWSEVMRFFT-NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELA--NMTL-ILGNRDDIEDMSNS 527 (1024)
Q Consensus 452 ~~~~~~~~~~p~~~~~~~~~~~-~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~--~l~L-IvG~~~~~~~l~~~ 527 (1024)
.+ ..+.++.. .++.++|+++||+++.||++.+++|+..+.+..+.. ++.+ ++|.
T Consensus 134 ---------~~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---------- 191 (335)
T PHA01633 134 ---------VP---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---------- 191 (335)
T ss_pred ---------hH---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----------
Confidence 00 11112221 256789999999999999999999999985322211 3455 3442
Q ss_pred chHHHHHHHHHHHHcCCCCCEEeC---CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc
Q 001705 528 SSVVLTTVLKLIDKYDLYGQVAYP---KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP 604 (1024)
Q Consensus 528 ~~~~~~~i~~~i~~~~l~~~V~~~---g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~ 604 (1024)
....++++.++|.|. |+.+.+++.++|+.| |+||+||.+||||++++||||||+|||+++.||.
T Consensus 192 ---------~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l 258 (335)
T PHA01633 192 ---------KQFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPL 258 (335)
T ss_pred ---------HHHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCc
Confidence 123456777899998 566778999999999 9999999999999999999999999999999998
Q ss_pred hhhhcc------------------CCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001705 605 VDILKA------------------LNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLS 664 (1024)
Q Consensus 605 ~eii~~------------------~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~ 664 (1024)
.|++.+ ...|+++++.|+++++++|.+++...+ ..++++++++.++.|+|+.++++|++
T Consensus 259 ~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 259 DEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 886431 124778999999999999999966532 33447788888899999999999863
No 100
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=1.4e-23 Score=240.31 Aligned_cols=330 Identities=18% Similarity=0.193 Sum_probs=226.3
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
+||..+++.+|+++|.++| |+|+++|.... ...+. ....|++++++|.... .+...+.
T Consensus 9 ~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~---------~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~~ 66 (350)
T cd03785 9 TGGHIFPALALAEELRERG--AEVLFLGTKRG---------LEARL-------VPKAGIPLHTIPVGGL----RRKGSLK 66 (350)
T ss_pred chhhhhHHHHHHHHHHhCC--CEEEEEECCCc---------chhhc-------ccccCCceEEEEecCc----CCCChHH
Confidence 6899999999999999999 99999988531 00110 1113788888886321 1111222
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+..+.. .+.....+.+.+.+ .+||+||+|....+..+.++++..++|++++.|+..+.
T Consensus 67 ~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~------------- 125 (350)
T cd03785 67 KLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG------------- 125 (350)
T ss_pred HHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc-------------
Confidence 2211111 12222223333333 57999999987666666777777899999877653110
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
.. ++.+.+.+|.|++.|+...+. +.+ .++.+||||+|.+.
T Consensus 126 -------~~-----~~~~~~~~~~vi~~s~~~~~~-------~~~---------------------~~~~~i~n~v~~~~ 165 (350)
T cd03785 126 -------LA-----NRLLARFADRVALSFPETAKY-------FPK---------------------DKAVVTGNPVREEI 165 (350)
T ss_pred -------HH-----HHHHHHhhCEEEEcchhhhhc-------CCC---------------------CcEEEECCCCchHH
Confidence 01 233456799999999866543 111 28999999999876
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~l~ 512 (1024)
+.+.. ...++..++++++|+++|+....|+... +++|+..+. .....+.
T Consensus 166 ~~~~~----------------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~--~~~~~~~ 215 (350)
T cd03785 166 LALDR----------------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELL--RKRLQVI 215 (350)
T ss_pred hhhhh----------------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhh--ccCeEEE
Confidence 54321 0122233467788888888777777765 458888774 2222333
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
+++|.+. .+++.+.+.++ .++|.|.|+. +++.++|+.| |++|.++- +++++|||++
T Consensus 216 ~i~G~g~------------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~sg----~~t~~Eam~~ 271 (350)
T cd03785 216 HQTGKGD------------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRAG----ASTVAELAAL 271 (350)
T ss_pred EEcCCcc------------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECCC----HhHHHHHHHh
Confidence 4667652 23445555554 4689999996 8999999999 99998662 6899999999
Q ss_pred CCcEEEcCCCC--------chhhhccCCcEEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001705 593 GLPVVATKNGG--------PVDILKALNNGLLVDPH--DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCR 660 (1024)
Q Consensus 593 G~PVVat~~Gg--------~~eii~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~ 660 (1024)
|+|||++..++ ..+.+.+..+|+++++. |+++++++|..++.+++.+++++.++++.++.+.-+++++
T Consensus 272 G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 272 GLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred CCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 99999987654 24666667899999987 8999999999999999999999999998887777777664
No 101
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.92 E-value=2.8e-23 Score=237.62 Aligned_cols=327 Identities=19% Similarity=0.198 Sum_probs=217.7
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
+||......+|+++|.++| |+|+++|+... ...+. ....|+++++++..+.. ...+..
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~---------~~~~~-------~~~~g~~~~~i~~~~~~----~~~~~~ 67 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG---------LEKRL-------VPKAGIEFYFIPVGGLR----RKGSFR 67 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc---------chhcc-------cccCCCceEEEeccCcC----CCChHH
Confidence 4677766679999999999 99999986321 00010 01248888888864321 111111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+..+.. .+.....+.+.+.+ .+||+||+|.......+.++++..++|++++.|+...
T Consensus 68 ~l~~~~~-~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-------------- 125 (348)
T TIGR01133 68 LIKTPLK-LLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-------------- 125 (348)
T ss_pred HHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------------
Confidence 1111111 11222233333333 5799999998766666666777789999865553211
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
... ++.+.+.+|.+++.++...+.+ +..+||||+|...
T Consensus 126 ---------~~~--~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~n~v~~~~ 163 (348)
T TIGR01133 126 ---------GLT--NKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVGNPVRQEI 163 (348)
T ss_pred ---------cHH--HHHHHHHhCeeEECchhHhhcC-------------------------------CceEEcCCcCHHH
Confidence 000 2345678999999998654431 3478999998655
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~~l~ 512 (1024)
+.+... ..++..+++.++|+++|+....|++.. +++|+..+.. ....+.
T Consensus 164 ~~~~~~----------------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~~~ 213 (348)
T TIGR01133 164 RSLPVP----------------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQIV 213 (348)
T ss_pred hcccch----------------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcEEE
Confidence 432210 012233467789999998888888765 4588887742 233443
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
+++|+++ .+++.+.+.++++...+.|. . .++.++|..| |++|.++ | +++++|||++
T Consensus 214 ~~~g~~~------------~~~l~~~~~~~~l~~~v~~~---~-~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~~~ 269 (348)
T TIGR01133 214 HQTGKND------------LEKVKNVYQELGIEAIVTFI---D-ENMAAAYAAA----DLVISRA---G-ASTVAELAAA 269 (348)
T ss_pred EECCcch------------HHHHHHHHhhCCceEEecCc---c-cCHHHHHHhC----CEEEECC---C-hhHHHHHHHc
Confidence 3445432 24566677777776555555 2 3899999999 9999864 2 7899999999
Q ss_pred CCcEEEcCCCC-------chhhhccCCcEEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001705 593 GLPVVATKNGG-------PVDILKALNNGLLVDPHD--QNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCR 660 (1024)
Q Consensus 593 G~PVVat~~Gg-------~~eii~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~ 660 (1024)
|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.++++|++.+++|++++++.+..+.-+++++
T Consensus 270 g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 270 GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 99999998654 235788889999999876 999999999999999999999999988776666665554
No 102
>PTZ00174 phosphomannomutase; Provisional
Probab=99.90 E-value=5.4e-23 Score=223.76 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=138.1
Q ss_pred eEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 749 LIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+.+||+||||||+++++.+++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+..
T Consensus 5 ~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAYKD 78 (247)
T ss_pred CeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEEEC
Confidence 457889999999999899999999999999998 9999999999999998888754321 2467999999999964
Q ss_pred CCccccCcchhhhhcccCCchhHHHHHhhhhh----c-cCCCCcccccccCCCCceEEEEEecCC------------Cch
Q 001705 829 WRDMVADGDYEAHVEYRWPGENVRSVVPRVAR----A-EDGAEDDIVGFVDASSSRCQSYSIKPG------------AET 891 (1024)
Q Consensus 829 ~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~----~-~~~~~~~~~~~~~~~~~~k~~~~~~~~------------~~~ 891 (1024)
+... +...+......+.+.+++..... . ............ .....+....... ...
T Consensus 79 -~~~i----~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (247)
T PTZ00174 79 -GELF----HSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYR--NGMINISPIGRNCSQEERDEFEKYDKEH 151 (247)
T ss_pred -CeEE----EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcC--CceEEeccccccCCHHHHHHHHhcCCcc
Confidence 3222 11111110111223333222111 0 000000000000 0000000000000 001
Q ss_pred hhHHHHHHHHHhcCCeEEEEEecC-CeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhcCC-
Q 001705 892 RKVDNIRQRLRMRGFRCNLVYTRA-GSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLVGL- 965 (1024)
Q Consensus 892 ~~~~el~~~L~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~~a- 965 (1024)
....++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ +++++|| || ++| | ++||+.+
T Consensus 152 ~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~eviaf-GD~~~~~~N-D-ieMl~~~~ 224 (247)
T PTZ00174 152 HIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHFF-GDKTFEGGN-D-YEIYNDPR 224 (247)
T ss_pred hHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEEE-cccCCCCCC-c-HhhhhcCC
Confidence 123456666644433455566653 24999999999999999999998 5899998 99 999 9 9999976
Q ss_pred CceEEecCCCCCChHHHhcccc
Q 001705 966 HKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 966 g~gVaMgna~~NA~~elk~~ad 987 (1024)
-.|+.++ ||.+.+|..+.
T Consensus 225 ~~g~~v~----n~~~~~~~~~~ 242 (247)
T PTZ00174 225 TIGHSVK----NPEDTIKILKE 242 (247)
T ss_pred CceEEeC----CHHHHHHHHHH
Confidence 4677888 99999998876
No 103
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.90 E-value=9.3e-23 Score=218.44 Aligned_cols=204 Identities=11% Similarity=0.042 Sum_probs=133.4
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++||||||+++++.+++.++++|++++++ |+.|++||||++..+..+++.+++. ..++||+||+.|++...
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 4789999998888665665699999999987 9999999999999999999998873 25799999999997521
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhc----cCCCCcccc-----------c--ccCCCCceEEEEEecCCCchhh
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARA----EDGAEDDIV-----------G--FVDASSSRCQSYSIKPGAETRK 893 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~----~~~~~~~~~-----------~--~~~~~~~~k~~~~~~~~~~~~~ 893 (1024)
.... ..|.. .......+.++.++..+... ......... . ........++.+..... ...
T Consensus 74 ~~~~-~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 149 (221)
T TIGR02463 74 WREE-PGYPR-IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDS--DSR 149 (221)
T ss_pred cccC-CCceE-EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCc--hhH
Confidence 1000 00000 01111122333333221110 000000000 0 00001112233332111 224
Q ss_pred HHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 894 VDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 894 ~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+++.+.+...+ +.++.+ +. ++||+|.+++||.|++++++++|++++++++| ||+.| | ++||+.+|+|||+.
T Consensus 150 ~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~-GD~~N-D-i~ml~~ag~~va~~ 221 (221)
T TIGR02463 150 MPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLGL-GDGPN-D-LPLLEVADYAVVIK 221 (221)
T ss_pred HHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEEE-CCCHH-H-HHHHHhCCceEEeC
Confidence 556666665543 445544 44 89999999999999999999999999999998 99999 9 99999999999974
No 104
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.89 E-value=4.6e-22 Score=218.21 Aligned_cols=199 Identities=10% Similarity=0.005 Sum_probs=136.2
Q ss_pred EEEEEecCCCCCCC-----chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCce
Q 001705 750 IVIAADCYDSDGNT-----TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSE 824 (1024)
Q Consensus 750 llIa~DlDGTl~~~-----~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~ 824 (1024)
.+|++|+||||++. ++.+++.++++|++|.++ +|+.|+|+|||++..+.++++.+++ .+||+||++
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~nGa~ 85 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVHGAE 85 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeCCCe
Confidence 34559999998873 568899999999999984 4999999999999999999987654 489999999
Q ss_pred EEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCC-chhhHHHHHHHHHh
Q 001705 825 LYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGA-ETRKVDNIRQRLRM 903 (1024)
Q Consensus 825 I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~el~~~L~~ 903 (1024)
++..++.. +...+...|. ..+...+..+....++ ..++. ....+.+++.... ....+.++.+.+..
T Consensus 86 i~~~~~~~-----~~~~l~~~~~-~~i~~~l~~~~~~~pg---~~ve~----k~~~~~~h~r~~~~~~~~~~~l~~~i~~ 152 (266)
T PRK10187 86 RRDINGKT-----HIVHLPDAIA-RDISVQLHTALAQLPG---AELEA----KGMAFALHYRQAPQHEDALLALAQRITQ 152 (266)
T ss_pred eecCCCCe-----eeccCChhHH-HHHHHHHHHHhccCCC---cEEEe----CCcEEEEECCCCCccHHHHHHHHHHHHh
Confidence 98752211 1112222221 1222223232211111 22322 2234445553221 12334445444443
Q ss_pred cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC----CceEEecCCCCCCh
Q 001705 904 RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL----HKTLILRGSVMYGS 979 (1024)
Q Consensus 904 ~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a----g~gVaMgna~~NA~ 979 (1024)
... ...+.+++ .++||+|+++|||.||++|++++|++.+++++| ||+.| | ++||+.+ |.||+|| ||.
T Consensus 153 ~~~-~~~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~-GD~~n-D-~~mf~~~~~~~g~~vavg----~a~ 223 (266)
T PRK10187 153 IWP-QLALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFV-GDDLT-D-EAGFAVVNRLGGISVKVG----TGA 223 (266)
T ss_pred hCC-ceEEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEE-cCCcc-H-HHHHHHHHhcCCeEEEEC----CCC
Confidence 322 23344555 599999999999999999999999999999997 99999 9 9999998 9999999 665
No 105
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.88 E-value=1.7e-21 Score=229.77 Aligned_cols=246 Identities=13% Similarity=0.189 Sum_probs=164.1
Q ss_pred CCCCCcccceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEE
Q 001705 739 VTHSPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIV 818 (1024)
Q Consensus 739 ~~~~~~~~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI 818 (1024)
++..|..-++-.+|++|+||||+++++.+++.++++|++++++ |+.|++||||++..+..+++.+++ .+++|
T Consensus 406 ~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl----~~~~I 477 (694)
T PRK14502 406 PSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGI----KDPFI 477 (694)
T ss_pred cccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCC----CCeEE
Confidence 4455544444556779999999988777778899999999987 999999999999999999999887 35799
Q ss_pred ecCCceEEcCCCcccc----C---cchhhhhcccCCchhHHHHHhhhhhccC---------------CCCcc--------
Q 001705 819 CNSGSELYFPWRDMVA----D---GDYEAHVEYRWPGENVRSVVPRVARAED---------------GAEDD-------- 868 (1024)
Q Consensus 819 ~~nGa~I~~~~~~~~~----d---~~~~~~i~~~w~~~~v~~~l~~~~~~~~---------------~~~~~-------- 868 (1024)
|+||+.|+.+++.... + ..+ .........+.++.++..+..... .....
T Consensus 478 ~eNGA~I~~~~~~~~~~~~~~~~~~~~-iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 478 TENGGAIFIPKDYFRLPFAYDRVAGNY-LVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred EcCCCEEEECCCcccccccccccCCCe-EEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999999986321100 0 000 011122333444444433322100 00000
Q ss_pred ---cc----cccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCC
Q 001705 869 ---IV----GFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGI 941 (1024)
Q Consensus 869 ---~~----~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi 941 (1024)
.. .........++.+.. + ...++++.+.++..+ +++.. ++ +++||+ .++|||+||++|++++|+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~g-d---~e~Leel~~~L~~~~--l~v~~-g~-rfleI~-~gvdKG~AL~~L~e~~gI 627 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIEG-D---KRSTNIVLNHIQQSG--LEYSF-GG-RFYEVT-GGNDKGKAIKILNELFRL 627 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEcC-C---HHHHHHHHHHHHHcC--cEEEE-CC-EEEEeC-CCCCHHHHHHHHHHHhCC
Confidence 00 000011223444432 2 235678888887653 44444 44 599999 599999999999999999
Q ss_pred CCCCEEEE-eCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHh
Q 001705 942 DLSKMVVF-VGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKA 1020 (1024)
Q Consensus 942 ~~~~vvaf-iGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~ 1020 (1024)
+.+++++| +||+.| | ++||+.+|+||||++-. +..+.+ ..++.. .+.+..+.|=..|+++
T Consensus 628 ~~~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~-~~~~~l---------------~~~~~~-~~~~~GP~GW~eai~~ 688 (694)
T PRK14502 628 NFGNIHTFGLGDSEN-D-YSMLETVDSPILVQRPG-NKWHKM---------------RLRNPS-YVKGVGPEGFSRAVTD 688 (694)
T ss_pred CccceEEEEcCCcHh-h-HHHHHhCCceEEEcCCC-CCCCcc---------------CCCCce-ecCCCCcHHHHHHHHH
Confidence 99999985 499999 9 99999999999999444 222233 123444 5578888898888876
Q ss_pred c
Q 001705 1021 I 1021 (1024)
Q Consensus 1021 ~ 1021 (1024)
+
T Consensus 689 ~ 689 (694)
T PRK14502 689 I 689 (694)
T ss_pred H
Confidence 5
No 106
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.88 E-value=6.8e-21 Score=224.34 Aligned_cols=283 Identities=18% Similarity=0.230 Sum_probs=190.0
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||++...........++..++|++++.|.+....+ ..|..+..+ .+.+++.+|.|++.|
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~--------------~~~~~~~~~--~r~~~~~~d~ii~~S 186 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSF--------------KRYQKFKRF--YRLLFKNIDLVLAQS 186 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhH--------------HHHHHHHHH--HHHHHHhCCEEEECC
Confidence 5799999885543322333345679999988775422211 112222222 455788999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+..+ |.+.. +.++||+ +++.+.+... .+
T Consensus 187 ~~~~~~l~~~-----------------------g~~~~-i~vi~n~-~~d~~~~~~~---------------------~~ 220 (425)
T PRK05749 187 EEDAERFLAL-----------------------GAKNE-VTVTGNL-KFDIEVPPEL---------------------AA 220 (425)
T ss_pred HHHHHHHHHc-----------------------CCCCC-cEecccc-cccCCCChhh---------------------HH
Confidence 9887764331 22223 7788874 3333211110 00
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
.......++. +++++|+++|+. .|+.+.+++|+..+. ...|++.| |+|.++.. ..++.+++++
T Consensus 221 ~~~~~r~~~~--~~~~vil~~~~~--~~~~~~ll~A~~~l~--~~~~~~~liivG~g~~r----------~~~l~~~~~~ 284 (425)
T PRK05749 221 RAATLRRQLA--PNRPVWIAASTH--EGEEELVLDAHRALL--KQFPNLLLILVPRHPER----------FKEVEELLKK 284 (425)
T ss_pred HHHHHHHHhc--CCCcEEEEeCCC--chHHHHHHHHHHHHH--HhCCCcEEEEcCCChhh----------HHHHHHHHHh
Confidence 0111122222 567888888874 688999999999874 34577766 66776531 2457778888
Q ss_pred cCCCCCEEeCCCCC------------CCCHHHHHHHhhcCCcEEEe-cCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhh
Q 001705 542 YDLYGQVAYPKHHK------------QSDVPDIYRLAAKTKGVFIN-PALVEPFGLTIIEAAAYGLPVVATKN-GGPVDI 607 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~------------~~el~~ly~~A~~~~dv~v~-ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~ei 607 (1024)
+++.. +.|.+... ..++..+|+.| |++++ +|+.|++|.+++||||||+|||++.. ++..++
T Consensus 285 ~gl~~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~ 359 (425)
T PRK05749 285 AGLSY-VRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEI 359 (425)
T ss_pred CCCcE-EEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHH
Confidence 88752 44443211 35899999999 99655 67889999999999999999999874 666666
Q ss_pred hccC-CcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 001705 608 LKAL-NNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 608 i~~~-~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+... .+|+++.|.|+++++++|.++++|++.++++++++++.++.. ....+++++.+.+.+
T Consensus 360 ~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 360 FERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred HHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 5542 468888899999999999999999999999999999998533 255667777776544
No 107
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.88 E-value=9.1e-22 Score=208.05 Aligned_cols=197 Identities=16% Similarity=0.247 Sum_probs=135.7
Q ss_pred EEEEecCCCCCCCc-hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCC
Q 001705 751 VIAADCYDSDGNTT-ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 751 lIa~DlDGTl~~~~-~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~ 829 (1024)
+|++|+||||++++ ..+++.++++|++|+++ |+.|+|+|||++..+..+++.++ +++||+||+.|++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 36799999988876 68999999999999998 89999999999999999998832 469999999999752
Q ss_pred Ccccc--CcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCC-CchhhHHHHHHHHHhcC-
Q 001705 830 RDMVA--DGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPG-AETRKVDNIRQRLRMRG- 905 (1024)
Q Consensus 830 ~~~~~--d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~el~~~L~~~~- 905 (1024)
+.... ...|...+. +. +.+...+..+... ......+....++.+++... .......++...+....
T Consensus 71 ~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~-------~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (204)
T TIGR01484 71 EILYIEPSDVFEEILG--IK-EEIGAELKSLSEH-------YVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGR 140 (204)
T ss_pred EEEEEcccccHHHHHH--hh-hhcCceeeeeccc-------cccceeecccceeeEEEeccchhhHHHHHHHHHHHhhcc
Confidence 11110 011111111 00 1111111111111 11111223445556655332 11122334445554432
Q ss_pred --CeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 906 --FRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 906 --~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
..+.++++++. ++||+|++++|+.|+++++++++++++++++| ||+.| | ++||+.+|.+|||
T Consensus 141 ~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~-GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 141 NDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILAF-GDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred ccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEEE-cCCHH-H-HHHHHHcCCceEC
Confidence 34677767776 99999999999999999999999999999997 99999 9 9999999999998
No 108
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.86 E-value=1.4e-19 Score=209.31 Aligned_cols=265 Identities=19% Similarity=0.150 Sum_probs=179.2
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
....+++++.+.+..++.. ..+.++|+..++...... +. . .. ....|+.+++.||.|++.|
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~----~~-----~~~~e~~~~~~ad~vi~~S 161 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-P----PE-----LLEAERRLLKRADLVFTTS 161 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-C----HH-----HHHHHHHHHHhCCEEEECC
Confidence 4567888876655544444 457899999998643211 11 0 00 1144788899999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+.... .++.+||||+|.+.|.+... ...+
T Consensus 162 ~~l~~~~~~~~--------------------------~~i~~i~ngvd~~~f~~~~~-------------------~~~~ 196 (373)
T cd04950 162 PSLYEAKRRLN--------------------------PNVVLVPNGVDYEHFAAARD-------------------PPPP 196 (373)
T ss_pred HHHHHHHhhCC--------------------------CCEEEcccccCHHHhhcccc-------------------cCCC
Confidence 87665432211 28999999999998865431 0000
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
.+.....++++|+|+|+++++++++.+.++.... |+..+ ++|.++...+. ..
T Consensus 197 ------~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~------p~~~~vliG~~~~~~~~---------------~~ 249 (373)
T cd04950 197 ------PADLAALPRPVIGYYGAIAEWLDLELLEALAKAR------PDWSFVLIGPVDVSIDP---------------SA 249 (373)
T ss_pred ------hhHHhcCCCCEEEEEeccccccCHHHHHHHHHHC------CCCEEEEECCCcCccCh---------------hH
Confidence 0011235678999999999988887666555432 44555 67776221111 11
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-----CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEE
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALV-----EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLL 616 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~-----Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gll 616 (1024)
+.-.++|.|+|+++.++++.+|+.| |++++|+.. +.+|++++||||||+|||+|+.++. +.....+++
T Consensus 250 ~~~~~nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~ 322 (373)
T cd04950 250 LLRLPNVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL 322 (373)
T ss_pred hccCCCEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE
Confidence 1124689999999999999999999 999999753 4679999999999999999986544 433343444
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 617 VDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 617 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+ +.|+++++++|.+++.++...+.. ...+.++.|||+..++++++.+.+
T Consensus 323 ~-~~d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 323 I-ADDPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred e-CCCHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 4 669999999999987643222211 122245799999999999976654
No 109
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.86 E-value=2.2e-19 Score=208.42 Aligned_cols=263 Identities=13% Similarity=0.109 Sum_probs=178.0
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||+|++.........+...++|++.+.++++.. ..++.+.+|.+++.|
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~---------------------------~~~~~~~ad~i~~~s 155 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH---------------------------KIWVHREVDRYFVAT 155 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC---------------------------cccccCCCCEEEECC
Confidence 58999999876544333333344679988766654221 012467899999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+... |.+..++.++++.++.. |.+..
T Consensus 156 ~~~~~~l~~~-----------------------gi~~~ki~v~G~p~~~~-f~~~~------------------------ 187 (380)
T PRK13609 156 DHVKKVLVDI-----------------------GVPPEQVVETGIPIRSS-FELKI------------------------ 187 (380)
T ss_pred HHHHHHHHHc-----------------------CCChhHEEEECcccChH-HcCcC------------------------
Confidence 8776654321 11223777776555422 21111
Q ss_pred cchHHHhhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPT-ILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
.......++...+++++ +++.|++...|++..+++++.+. +++.+ ++|++. .....++.+++.
T Consensus 188 ~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~~~ 252 (380)
T PRK13609 188 NPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDLQE 252 (380)
T ss_pred CHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHHHh
Confidence 00112334444556665 45568888889999999988543 34444 343321 123455666666
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCch----hhhccCCcEE
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPV----DILKALNNGL 615 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~----eii~~~~~Gl 615 (1024)
.++ .+|.|+|++ +++.++|+.| |++|. ++.|++++||||||+|||+++ .+|.. +.+. .+|+
T Consensus 253 ~~~--~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~ 318 (380)
T PRK13609 253 TNP--DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGA 318 (380)
T ss_pred cCC--CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCc
Confidence 554 589999996 5799999999 99884 566999999999999999986 55531 2333 2455
Q ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Q 001705 616 LVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 616 lv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~ 669 (1024)
.+.+.|+++++++|.++++|++.+++|++++++....++++.+++.+++.+..+
T Consensus 319 ~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred EEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 555679999999999999999999999999988777899999999998887654
No 110
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.85 E-value=3.1e-19 Score=207.20 Aligned_cols=264 Identities=14% Similarity=0.071 Sum_probs=182.6
Q ss_pred CcceEEEEcCCC-h---HHHHHHHH--ccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCC
Q 001705 303 TWPYVIHGHYAD-A---GEVAAHLS--GALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASE 376 (1024)
Q Consensus 303 ~~pDvIh~h~~~-~---~~~a~~l~--~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad 376 (1024)
.+||+||++++. . ..+...+. ...++|++.+.++++... ..+..+.+|
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~--------------------------~~w~~~~~d 152 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH--------------------------PTWFHKGVT 152 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC--------------------------cccccCCCC
Confidence 589999997643 2 22222222 134799998888752110 112467999
Q ss_pred EEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCcccc
Q 001705 377 MVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQ 456 (1024)
Q Consensus 377 ~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~ 456 (1024)
.+++.|+...+++... |.+..++.+++++++...+.+..
T Consensus 153 ~~~~~s~~~~~~l~~~-----------------------g~~~~ki~v~g~~v~~~f~~~~~------------------ 191 (382)
T PLN02605 153 RCFCPSEEVAKRALKR-----------------------GLEPSQIRVYGLPIRPSFARAVR------------------ 191 (382)
T ss_pred EEEECCHHHHHHHHHc-----------------------CCCHHHEEEECcccCHhhccCCC------------------
Confidence 9999998776654332 12223899999998865332211
Q ss_pred ccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc--CCCCc--EEEEEecCCCcccccccchHHH
Q 001705 457 SKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPL--RELAN--MTLILGNRDDIEDMSNSSSVVL 532 (1024)
Q Consensus 457 ~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l--~~~~~--l~LIvG~~~~~~~l~~~~~~~~ 532 (1024)
.....+.++..++++++|+++||....|++..+++++..+... ...++ +.+++|+++. ..
T Consensus 192 ------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~ 255 (382)
T PLN02605 192 ------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQ 255 (382)
T ss_pred ------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HH
Confidence 1112344555667899999999999999999999999764210 01233 3346665421 12
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC------CCchh
Q 001705 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN------GGPVD 606 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~------Gg~~e 606 (1024)
.++.+. ....+|.|+|++ ++++++|++| |++|.++ .|+++.||||||+|||+++. |+...
T Consensus 256 ~~L~~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~ 321 (382)
T PLN02605 256 SKLESR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPY 321 (382)
T ss_pred HHHHhh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHH
Confidence 233322 223468999996 5899999999 9999865 48899999999999999983 55544
Q ss_pred hhccCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 607 ILKALNNGLLVDPHDQNAIADALLKLLAD-KNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 607 ii~~~~~Gllv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
++ +.+.|+++ .|+++++++|.+++.+ ++.+++|++++++.....++..+++.+.+..
T Consensus 322 i~-~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 322 VV-DNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred HH-hCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 44 45567665 6999999999999998 9999999999999888889888887776654
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.84 E-value=1.4e-20 Score=192.81 Aligned_cols=161 Identities=31% Similarity=0.535 Sum_probs=141.7
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
...++++|+++||+++.||++.+++|+..+... ..+++.+ |+|+++ +...+...+..+++..++.|+
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~~ 78 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIFL 78 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEEE
T ss_pred CCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEcccc-----------ccccccccccccccccccccc
Confidence 357789999999999999999999999998531 2466666 677443 356677888999999999999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHH
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLK 631 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ 631 (1024)
+..+.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+
T Consensus 79 ~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 79 GYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 998888999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCHHHHHHHHHHHHHH
Q 001705 632 LLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 632 ll~d~~~~~~~~~~~~~~ 649 (1024)
++.+++.++.++++++++
T Consensus 155 ~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHhcCC
Confidence 999999999999999874
No 112
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.84 E-value=4.2e-19 Score=206.60 Aligned_cols=267 Identities=14% Similarity=0.131 Sum_probs=178.2
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||+||++.+.........++.+++|++...++.... . .++.+.+|.+++.|
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~----------------------~-----~w~~~~~d~~~v~s 155 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH----------------------K-----NWITPYSTRYYVAT 155 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc----------------------c-----ccccCCCCEEEECC
Confidence 58999999866443222222344589987655543110 0 12356899999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+...+.+... +.. ..++.+++++++.. |.+..
T Consensus 156 ~~~~~~l~~~--gi~---------------------~~ki~v~GiPv~~~-f~~~~------------------------ 187 (391)
T PRK13608 156 KETKQDFIDV--GID---------------------PSTVKVTGIPIDNK-FETPI------------------------ 187 (391)
T ss_pred HHHHHHHHHc--CCC---------------------HHHEEEECeecChH-hcccc------------------------
Confidence 8776664321 111 12788887777633 22111
Q ss_pred cchHHHhhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPT-ILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~-Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
.......++..++++++ +++.|++...||+..+++++.+. .+...+.+++|... ....++.+ .
T Consensus 188 ~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~----------~l~~~l~~---~ 251 (391)
T PRK13608 188 DQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSK----------ELKRSLTA---K 251 (391)
T ss_pred cHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCH----------HHHHHHHH---H
Confidence 01112233444556665 55789999899999999986332 12223333445331 12233333 3
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCc----hhhhccCCcEEE
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGP----VDILKALNNGLL 616 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~----~eii~~~~~Gll 616 (1024)
++..++|.++|+. ++++++|+.| |++|. .+.|+++.||||+|+|+|+++ .+|. ..++.+.+.|++
T Consensus 252 ~~~~~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~ 321 (391)
T PRK13608 252 FKSNENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI 321 (391)
T ss_pred hccCCCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE
Confidence 3445679999995 6899999999 99986 457999999999999999996 3331 223345556666
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhc
Q 001705 617 VDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 617 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+ .|+++++++|.++++|++.+++|++++++..+.|+++.+++.+++.+....+.
T Consensus 322 ~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 322 A--DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred e--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 5 49999999999999999999999999999888899999999999998765443
No 113
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.83 E-value=3.7e-20 Score=198.17 Aligned_cols=200 Identities=11% Similarity=0.076 Sum_probs=129.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++|+||||++. ..+++.++++|++++++ |+.|++||||+...+..+++++++ .+++||+||+.|+++..
T Consensus 1 li~~DlDGTLl~~-~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~----~~~~I~~NGa~I~~~~~ 71 (225)
T TIGR02461 1 VIFTDLDGTLLPP-GYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGV----EPPFIVENGGAIFIPRG 71 (225)
T ss_pred CEEEeCCCCCcCC-CCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCcEEEcCCcEEEecCc
Confidence 4679999998885 45666899999999998 999999999999999999999987 34799999999998521
Q ss_pred ccc-----c--CcchhhhhcccCCchhHHHHHhhhhhccC--CCCccccc--------------ccCCCCceEEEEEecC
Q 001705 831 DMV-----A--DGDYEAHVEYRWPGENVRSVVPRVARAED--GAEDDIVG--------------FVDASSSRCQSYSIKP 887 (1024)
Q Consensus 831 ~~~-----~--d~~~~~~i~~~w~~~~v~~~l~~~~~~~~--~~~~~~~~--------------~~~~~~~~k~~~~~~~ 887 (1024)
... . +..+ ......+..+.++.++........ ........ ........++.+. .+
T Consensus 72 ~~~~~~~~~~~~~~~-~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~ 149 (225)
T TIGR02461 72 YFPFPVGAGREVGNY-EVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-WS 149 (225)
T ss_pred cccccccccccCCCe-EEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-CC
Confidence 000 0 0000 011222333444444433322000 00000000 0000111232222 11
Q ss_pred CCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCC--CCCCEEEEeCCCCCCChHHhhcCC
Q 001705 888 GAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGI--DLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 888 ~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi--~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
.....++.+.+.. ..++++.+.. ++++ +.++|||.|++.|++.+++ +.+++++| ||+.| | ++||+.+
T Consensus 150 ---~e~~~~~~~~~~~--~~~~~~~s~~--~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~~-GD~~n-D-~~ml~~a 218 (225)
T TIGR02461 150 ---REGWEAILVTARA--RGLKYTHGGR--FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVGL-GDSEN-D-FPMFEVV 218 (225)
T ss_pred ---HHHHHHHHHHHHH--cCCcEEECCE--EEEE-CCCCCHHHHHHHHHHHhccccCcccEEEE-cCCHH-H-HHHHHhC
Confidence 1234556666643 2345555543 6776 5599999999999999987 66689998 99999 9 9999999
Q ss_pred CceEEec
Q 001705 966 HKTLILR 972 (1024)
Q Consensus 966 g~gVaMg 972 (1024)
|+||++|
T Consensus 219 g~~v~v~ 225 (225)
T TIGR02461 219 DLAFLVG 225 (225)
T ss_pred CCcEecC
Confidence 9999986
No 114
>PLN02423 phosphomannomutase
Probab=99.82 E-value=1.5e-19 Score=195.95 Aligned_cols=205 Identities=14% Similarity=0.170 Sum_probs=126.9
Q ss_pred cceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceE
Q 001705 746 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I 825 (1024)
|+.-+++++|+||||+++++.++++++++|++++ + ++.|++||||++..+.+.+..... .+++++||+||+.+
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~-~----~i~fviaTGR~~~~~~~~~~~~~~--~~~~~~I~~NGa~i 76 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELR-K----VVTVGVVGGSDLSKISEQLGKTVI--NDYDYVFSENGLVA 76 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHH-h----CCEEEEECCcCHHHHHHHhccccc--ccCCEEEECCceEE
Confidence 4445566799999999998899999999999998 4 499999999999998887776311 12357999999999
Q ss_pred EcCCCccccCcchhhhhcccCCchhHHHHHhhhhhc-----cCCCCcccccccCCCCceEEEEEecCC------------
Q 001705 826 YFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARA-----EDGAEDDIVGFVDASSSRCQSYSIKPG------------ 888 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~k~~~~~~~~------------ 888 (1024)
+.. +... +...+......+.++.++...... .........+........+ +...+.
T Consensus 77 ~~~-g~~i----~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~--~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 77 HKD-GKLI----GTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVS--PIGRNCSQEERDEFEKYD 149 (245)
T ss_pred EeC-CEEE----EEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccC--cccccCCHhHHhhHHhhC
Confidence 954 3222 111111111122333332221110 0000000000000000000 000000
Q ss_pred CchhhHHHHHHHHHhcCCeEEEEEecCC-eEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhc
Q 001705 889 AETRKVDNIRQRLRMRGFRCNLVYTRAG-SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLV 963 (1024)
Q Consensus 889 ~~~~~~~el~~~L~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~ 963 (1024)
.......++.+.+......+.++.+.++ .+|||+|+|+|||.||+.|+ +++++||| || ++| | ++||+
T Consensus 150 ~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~aF-GD~~~~~~N-D-~eMl~ 221 (245)
T PLN02423 150 KVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHFF-GDKTYEGGN-D-HEIFE 221 (245)
T ss_pred ccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEEE-eccCCCCCC-c-HHHHh
Confidence 0011234555555544344566666553 59999999999999999999 89999999 99 799 9 99999
Q ss_pred C-CCceEEec
Q 001705 964 G-LHKTLILR 972 (1024)
Q Consensus 964 ~-ag~gVaMg 972 (1024)
. .-.++.|.
T Consensus 222 ~~~~~~~~~~ 231 (245)
T PLN02423 222 SERTIGHTVT 231 (245)
T ss_pred CCCcceEEeC
Confidence 6 55788887
No 115
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.81 E-value=2.5e-17 Score=175.18 Aligned_cols=389 Identities=16% Similarity=0.239 Sum_probs=267.6
Q ss_pred CCCChHHHHHHHHHHHHHcC-CCceEEEEEecCCCCCCCCcccCCCccccCCC--CC--CCCCCCeEEEEecCCCCCCcc
Q 001705 192 SDTGGQVKYVVELARALANT-EGVYRVDLLTRQIASPEVDSSYGEPNEMLSCP--SD--GTGSCGAYIIRIPCGARDKYI 266 (1024)
Q Consensus 192 ~~~GG~~~~v~~La~aLa~~-g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~--~~--~~~~~gv~i~rip~~~~~~~~ 266 (1024)
...||-++..+--.+.+.+. +. +...++|.++.- .|.+++... .. +-.++++..+.+.. +++
T Consensus 54 NAGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n~--------t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~----R~l 120 (465)
T KOG1387|consen 54 NAGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFNV--------TPENILNKVKNKFDIDLDSDNIFFIYLKL----RYL 120 (465)
T ss_pred cCCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCCC--------CHHHHHHHHHHhcCceecccceEEEEEEe----eee
Confidence 45788999999999998775 32 566666666421 111111000 00 02345777777765 566
Q ss_pred ccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCC--chhhhHH
Q 001705 267 AKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSL--GRNKFEQ 344 (1024)
Q Consensus 267 ~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l--~~~~~~~ 344 (1024)
-...-|+++.-..+.+-..+..+.. +.+ +-|||..-..-.+...+ .++...++|++...|-- ..+.+..
T Consensus 121 Vea~~~~hfTllgQaigsmIl~~Ea-i~r-------~~Pdi~IDtMGY~fs~p-~~r~l~~~~V~aYvHYP~iS~DML~~ 191 (465)
T KOG1387|consen 121 VEASTWKHFTLLGQAIGSMILAFEA-IIR-------FPPDIFIDTMGYPFSYP-IFRRLRRIPVVAYVHYPTISTDMLKK 191 (465)
T ss_pred eecccccceehHHHHHHHHHHHHHH-HHh-------CCchheEecCCCcchhH-HHHHHccCceEEEEecccccHHHHHH
Confidence 6677899987766666666655432 222 46887664321122222 23335589999999942 3333333
Q ss_pred HHh---cCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCc
Q 001705 345 LLK---QGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPR 421 (1024)
Q Consensus 345 l~~---~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~k 421 (1024)
+.. .|.....--..|+++.++ ...+-..||.|.+.|.....++.++.+.+ .
T Consensus 192 l~qrq~s~~l~~~KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~------------------------~ 245 (465)
T KOG1387|consen 192 LFQRQKSGILVWGKLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN------------------------T 245 (465)
T ss_pred HHhhhhcchhhhHHHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc------------------------c
Confidence 322 222222222345666655 34556699999998866666665555432 5
Q ss_pred EEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhh
Q 001705 422 MVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGE 501 (1024)
Q Consensus 422 i~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~ 501 (1024)
+.+++|..+.+....... . ...+.+.+|++|.+.|.||.. +|+.+..
T Consensus 246 ~~iVyPPC~~e~lks~~~---------------------t-----------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al 292 (465)
T KOG1387|consen 246 CSIVYPPCSTEDLKSKFG---------------------T-----------EGERENQLLSLAQFRPEKNHK-ILQLFAL 292 (465)
T ss_pred eeEEcCCCCHHHHHHHhc---------------------c-----------cCCcceEEEEEeecCcccccH-HHHHHHH
Confidence 566766667654322210 0 025678999999999999999 4444433
Q ss_pred ccccCCC----CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEec
Q 001705 502 CQPLREL----ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINP 576 (1024)
Q Consensus 502 l~~l~~~----~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~p 576 (1024)
.....+. ++..| ++|+... ++..+.+..++.++.++++.++|.|...+|.+++..+|..| -+-|++
T Consensus 293 ~~~~~pl~a~~~~iKL~ivGScRn-----eeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~ 363 (465)
T KOG1387|consen 293 YLKNEPLEASVSPIKLIIVGSCRN-----EEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHT 363 (465)
T ss_pred HHhcCchhhccCCceEEEEeccCC-----hhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhh
Confidence 3222333 34555 6676554 34567889999999999999999999999999999999999 788999
Q ss_pred CCCCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhccC---CcEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHh
Q 001705 577 ALVEPFGLTIIEAAAYGLPVVATKNGGP-VDILKAL---NNGLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIH 651 (1024)
Q Consensus 577 s~~Egfgl~llEAmA~G~PVVat~~Gg~-~eii~~~---~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~~ 651 (1024)
-..|-||+.+.||||+|+-+|+.+.||| -|||... .+|++.. +.++.|+++++++. +++++..+++++|+.+.
T Consensus 364 MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~ 441 (465)
T KOG1387|consen 364 MWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLA 441 (465)
T ss_pred hhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887 4676542 4799985 78899999999998 67779999999999999
Q ss_pred cCCHHHHHHHHHHHHHHhhhc
Q 001705 652 RFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 652 ~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
+|+-....+.|...+..++.+
T Consensus 442 RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 442 RFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HhhHHHHHHhHhHHHHHhhcc
Confidence 999999999999999888764
No 116
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.80 E-value=1.4e-18 Score=186.55 Aligned_cols=242 Identities=13% Similarity=0.120 Sum_probs=154.9
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
+|++||||||+++++.+.+.++++|++|+++ |+.|++||||++.++..+++++++. +++||+||+.|+.+.+
T Consensus 3 LIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p~~ 74 (302)
T PRK12702 3 LVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVPEH 74 (302)
T ss_pred EEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEccc
Confidence 6679999999998778889999999999998 9999999999999999999998883 4799999999998732
Q ss_pred ccc-c---Ccchhh-----hhcccCCchhHHHHHhhhhhcc----CCCCcccccc-------------cCCCCceEEEEE
Q 001705 831 DMV-A---DGDYEA-----HVEYRWPGENVRSVVPRVARAE----DGAEDDIVGF-------------VDASSSRCQSYS 884 (1024)
Q Consensus 831 ~~~-~---d~~~~~-----~i~~~w~~~~v~~~l~~~~~~~----~~~~~~~~~~-------------~~~~~~~k~~~~ 884 (1024)
+. . +..+.. .+........++..+..+.... .+..++..+. ...+..|.-.+.
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~ 153 (302)
T PRK12702 75 -YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFS 153 (302)
T ss_pred -cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceE
Confidence 11 0 111100 1111122355666665544321 1111111100 011223333344
Q ss_pred ecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEec------------------C---CCCHHHHHHHHHHHhCCC-
Q 001705 885 IKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVP------------------S---FASRIQALRYLSIRWGID- 942 (1024)
Q Consensus 885 ~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p------------------~---gasKg~AL~~L~~~~gi~- 942 (1024)
..+.. . ++++.+...+.+ ++ .++.|+.++. . +++||+|++.|.+.+.-.
T Consensus 154 w~~~~-~----~~~~~~~~~g~~--~~--~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 154 YSGDP-A----RLREAFAQQEAN--LT--QHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred ecCCH-H----HHHHHHHHcCCe--EE--ecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 32221 1 225666665543 22 4445788886 6 999999999999998754
Q ss_pred -CCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 943 -LSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 943 -~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
.-.+++. |||.| | ++||+.+.++|++.+......+ |++-. -+=|...|+.. .|....+.|=.+++.++
T Consensus 225 ~~~~tiaL-GDspN-D-~~mLe~~D~~vvi~~~~~~~~~--~~~~~-----l~~~~~~~~~~-~a~~~GP~GW~e~v~~~ 293 (302)
T PRK12702 225 GPIKALGI-GCSPP-D-LAFLRWSEQKVVLPSPIADSLW--KEALR-----LGGPEVQPQWQ-LAQLPGPEGWNEVVLMW 293 (302)
T ss_pred CCceEEEe-cCChh-h-HHHHHhCCeeEEecCCCCCCcc--ccccc-----ccCcccCccce-ecCCCCcHHHHHHHHHH
Confidence 3368885 99999 9 9999999999999854422211 11111 00033445544 66777888888887764
No 117
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.76 E-value=1.4e-17 Score=180.98 Aligned_cols=218 Identities=9% Similarity=0.122 Sum_probs=140.1
Q ss_pred EEEecCCCCCC----C-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 752 IAADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 752 Ia~DlDGTl~~----~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
|++|+||||.. | ...+++.++++|+.|.++ +++.|+|+|||++.++...+.-.++ +++++||++++
T Consensus 6 l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~~~~~~------~l~g~hG~~~~ 76 (244)
T TIGR00685 6 FFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGVKLPGL------GLAGEHGCEMK 76 (244)
T ss_pred EEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccCCCCce------eEEeecCEEEe
Confidence 34999999654 3 245789999999999987 7888999999988777554322112 59999999998
Q ss_pred cCCCccccCcchhhhh--cccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCC-Cchhh---HHHHHHH
Q 001705 827 FPWRDMVADGDYEAHV--EYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPG-AETRK---VDNIRQR 900 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i--~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~---~~el~~~ 900 (1024)
.. |... .|.... ...|. +.+..+...+... ++ ..+ +.+.+.++++++.. +.... +.++...
T Consensus 77 ~~-g~~~---~~~~~~~~~~~~~-~~~~~l~~~~~~~-pG---~~i----E~K~~s~~~hyr~a~d~~~~~~~~~~~~~~ 143 (244)
T TIGR00685 77 DN-GSCQ---DWVNLTEKIPSWK-VRANELREEITTR-PG---VFI----ERKGVALAWHYRQAPVPELARFRAKELKEK 143 (244)
T ss_pred cC-CCcc---eeeechhhhhhHH-HHHHHHHHHHhcC-CC---cEE----EecceEEEEEeccCCCcHHHHHHHHHHHHH
Confidence 63 2211 121110 01232 2333333333322 22 223 33557788887644 21111 2333333
Q ss_pred HHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC--------CceEEec
Q 001705 901 LRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL--------HKTLILR 972 (1024)
Q Consensus 901 L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a--------g~gVaMg 972 (1024)
+... ..+.++ .+..++|+.|.++|||.|++.++++++++.+++++| ||+.| | ++||+.+ +.+|+|+
T Consensus 144 ~~~~-~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~i-GD~~~-D-~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 144 ILSF-TDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYL-GDDIT-D-EDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HhcC-CCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEE-cCCCc-H-HHHHHHHhcccCCCCeEEEEEe
Confidence 3221 233333 343599999999999999999999999998899886 99999 9 9999988 5889996
Q ss_pred CCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 973 GSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 973 na~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
.+ +.+..|+ |+.. +.+++...|+.+
T Consensus 218 ----~g--~~~~~A~----------------~~~~--~~~~v~~~L~~l 242 (244)
T TIGR00685 218 ----SG--SKKTVAK----------------FHLT--GPQQVLEFLGLL 242 (244)
T ss_pred ----cC--CcCCCce----------------EeCC--CHHHHHHHHHHH
Confidence 33 3455566 6655 445588877664
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=9.6e-16 Score=171.16 Aligned_cols=288 Identities=26% Similarity=0.342 Sum_probs=205.0
Q ss_pred ceEEEEcCCChHH---HHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHH-HHhhhcCCEEEe
Q 001705 305 PYVIHGHYADAGE---VAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAE-ELGLDASEMVVT 380 (1024)
Q Consensus 305 pDvIh~h~~~~~~---~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e-~~~l~~Ad~Vi~ 380 (1024)
+|++|.+...... .........+.+.+...|.......... . .. ........ ..... ......++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLP--R--LL-LLLGLLRL--LLKRLKKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccc--c--ch-hhHHHHHH--HHHHHHHhccccccEEEE
Confidence 5999988764333 3455555668899999997643211000 0 00 00000000 01001 111124788888
Q ss_pred CCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 381 STRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 381 ~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
.+..........+.. .++.++|++++...+.+...
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~--------------------- 191 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARI--------------------- 191 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCcccc---------------------
Confidence 877543322111110 16889999999987754210
Q ss_pred CCcchHHHhhhhCCCC--CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPH--KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~--~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
...++ ...++++||+.+.||++.+++++..+.. ..++..+ ++|.++.. ...+..
T Consensus 192 -----------~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~--~~~~~~~~~~g~~~~~----------~~~~~~ 248 (381)
T COG0438 192 -----------GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKK--RGPDIKLVIVGDGPER----------REELEK 248 (381)
T ss_pred -----------CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhh--hcCCeEEEEEcCCCcc----------HHHHHH
Confidence 00122 4799999999999999999999999953 3332444 77777642 233445
Q ss_pred HHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEe
Q 001705 538 LIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617 (1024)
Q Consensus 538 ~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv 617 (1024)
.+.+++..+.|.|+|.++.+++..+|+.| |++++|+..|+||++++||||+|+|||+++.++..+++.++.+|+++
T Consensus 249 ~~~~~~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~ 324 (381)
T COG0438 249 LAKKLGLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV 324 (381)
T ss_pred HHHHhCCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec
Confidence 77777777899999999888999999989 99999999999999999999999999999999999999887778888
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhh
Q 001705 618 DPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++.|.+++++++..++++++.++.+...+++.+ ..|+|+..++.+.+.+..+..
T Consensus 325 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 325 PPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 877899999999999999988888888777777 699999999999999887653
No 119
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.74 E-value=1.5e-16 Score=168.76 Aligned_cols=119 Identities=32% Similarity=0.485 Sum_probs=97.7
Q ss_pred EEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC-CCH
Q 001705 482 ALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ-SDV 559 (1024)
Q Consensus 482 ~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~-~el 559 (1024)
++|++.+.||++.+++|+..+.+ +.+++.+ ++|.+.+. ......+.+++...+|.+.|+++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~--~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKE--RGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHH--hCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 99999999999999999999963 4466766 67776542 222233567778889999999855 455
Q ss_pred HHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEe
Q 001705 560 PDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLV 617 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv 617 (1024)
..+++.| |++++|+..|+||++++|||+||+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5555558 99999999999999999999999999999999999999888999875
No 120
>PLN03017 trehalose-phosphatase
Probab=99.73 E-value=1.2e-16 Score=178.35 Aligned_cols=201 Identities=14% Similarity=0.159 Sum_probs=131.3
Q ss_pred EEEEEecCCCCC----CCch-hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCce
Q 001705 750 IVIAADCYDSDG----NTTE-TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSE 824 (1024)
Q Consensus 750 llIa~DlDGTl~----~~~~-~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~ 824 (1024)
++|++|+||||. ++++ .++++++++|++|. + ++.|+|+|||++..+.+++.-.+ -++||+||++
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~hGa~ 180 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGSHGMD 180 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEcCCcE
Confidence 455699999977 3665 79999999999999 5 78999999999999999854322 3799999999
Q ss_pred EEcCCCcccc---Ccchhh-hhcccCCchhHHHH---HhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHH
Q 001705 825 LYFPWRDMVA---DGDYEA-HVEYRWPGENVRSV---VPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNI 897 (1024)
Q Consensus 825 I~~~~~~~~~---d~~~~~-~i~~~w~~~~v~~~---l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el 897 (1024)
|..+.+.... +..+.. .....|. +.+..+ +..+... .+....+.+.+++++|++.... ....++
T Consensus 181 i~~p~~~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~~L~~~~~~-------~pGa~VE~K~~~vavHyR~ad~-~~~~~l 251 (366)
T PLN03017 181 IKGPAKGFSRHKRVKQSLLYQPANDYL-PMIDEVYRQLLEKTKS-------TPGAKVENHKFCASVHFRCVDE-KKWSEL 251 (366)
T ss_pred EecCCCcceeccccccccccccchhhH-HHHHHHHHHHHHHHhc-------CCCCEEEecCcEEEEEcCcCCH-HHHHHH
Confidence 9875221110 000000 0111122 223333 3333332 2334455677899999976532 222334
Q ss_pred HHHHHhcCCe-EEEEEecCCeEEEEecC-CCCHHHHHHHHHHHhCCCC--CCEEEEeCCCCCCChHHhhcCC-----Cce
Q 001705 898 RQRLRMRGFR-CNLVYTRAGSRLNVVPS-FASRIQALRYLSIRWGIDL--SKMVVFVGEKGDTDYEDLLVGL-----HKT 968 (1024)
Q Consensus 898 ~~~L~~~~~~-~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~--~~vvafiGDs~N~D~~~Ml~~a-----g~g 968 (1024)
...+...... ..+...++.+.+||.|. +.+||.|+++|++.+++.. ..+++|+||+.+ | ++||+.+ |.|
T Consensus 252 ~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D-EDaF~~L~~~~~G~g 329 (366)
T PLN03017 252 VLQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D-EDAFKMLRDRGEGFG 329 (366)
T ss_pred HHHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-HHHHHHHhhcCCceE
Confidence 3333321000 11333455569999995 9999999999999998763 346677899999 9 9999955 678
Q ss_pred EEec
Q 001705 969 LILR 972 (1024)
Q Consensus 969 VaMg 972 (1024)
|.+|
T Consensus 330 I~VG 333 (366)
T PLN03017 330 ILVS 333 (366)
T ss_pred EEEC
Confidence 8888
No 121
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.73 E-value=2.5e-16 Score=189.42 Aligned_cols=337 Identities=15% Similarity=0.179 Sum_probs=218.0
Q ss_pred CcceEEEEcCCChHHHHHHHHcc--------------CCCCEEEEeCCCchhh---hH-HHHh---------cCCCCcch
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGA--------------LNVPMVLTGHSLGRNK---FE-QLLK---------QGRLPKDI 355 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~--------------~~ipiV~t~H~l~~~~---~~-~l~~---------~g~~~~~i 355 (1024)
.+||+||+|+|++++++..+.+. ....+|||.|++.+.- +. .++. .|.....+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 58999999999999888775321 1366899999974332 21 1110 11100000
Q ss_pred hhHHHHH----HHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCC
Q 001705 356 NASYKIM----RRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDF 431 (1024)
Q Consensus 356 ~~~y~~~----r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~ 431 (1024)
....... ..+..-+..+..|+.|.++|+.+.+-..+++..+.+.. .....++.-|-||||+
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~---------------~~~~~~i~gItNGId~ 304 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGY---------------EEEEVPIGYVTNGVHN 304 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhc---------------ccccCCccceeCCccc
Confidence 0000000 11223356788999999999877774333332221100 0011258889999999
Q ss_pred CCccccCCCCCCcccccc-ccCc---------cccc--cCCCCcch-------HHHhh----------------------
Q 001705 432 SYVTTQDTMGGDTDLKSL-IGND---------RTQS--KRNLPPMW-------SEVMR---------------------- 470 (1024)
Q Consensus 432 ~~f~~~~~~~~~~~~~~~-~~~~---------~~~~--~~~~p~~~-------~~~~~---------------------- 470 (1024)
..+.|... ..+-.. .+.+ .+.. ..+....| ..+.+
T Consensus 305 ~~W~~~~~----~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 305 PTWVAPEL----RDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred cccCCHHH----HHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 98876541 111110 0000 0000 00000000 01111
Q ss_pred h--hCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCC--CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 471 F--FTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLREL--ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 471 ~--~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~--~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
+ ...++.++|++++|+...||.+.+++++.++..+..+ ..+++ ++|.+...+.+ ..++...+..+.++....
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCC
Confidence 1 1357889999999999999999999999888532221 23555 66776543332 235677777887776677
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEe-cCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC----
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFIN-PAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP---- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~-ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p---- 619 (1024)
++|.|+-..+.+--..+|+.| |++++ |+. +|++|++=+=||..|.+.+++..|+..|.. ++.||+.+.+
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEY 532 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccc
Confidence 889886655443344555556 99999 888 999999999999999999999999998887 5689999984
Q ss_pred --------CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 620 --------HDQNAIADALLKLL-----AD-----KNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 620 --------~d~~~la~aI~~ll-----~d-----~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
.|.++|-++|.+.+ ++ |..|.++.+++++.. ..|||.+.+++|.+.|
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78999999997766 23 667999999999986 6999999999999886
No 122
>PLN02580 trehalose-phosphatase
Probab=99.73 E-value=1.3e-16 Score=179.79 Aligned_cols=204 Identities=14% Similarity=0.165 Sum_probs=133.8
Q ss_pred EEEecCCCCC----CC-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEE
Q 001705 752 IAADCYDSDG----NT-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 752 Ia~DlDGTl~----~~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~ 826 (1024)
+++|.||||. +| ...++++++++|+.|.+. ..++|+|||+...+..++...++ +++++||.++.
T Consensus 122 LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGsHG~e~~ 190 (384)
T PLN02580 122 LFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGSHGMDIM 190 (384)
T ss_pred EEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEeCCceee
Confidence 3389999954 34 446789999999999876 36999999999999999976555 59999999997
Q ss_pred cCCCccccCcchhhh---------------hcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCc-
Q 001705 827 FPWRDMVADGDYEAH---------------VEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAE- 890 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~---------------i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~- 890 (1024)
.+.+... ...|... ....|. +.+..++..+...... .+....+.+.+++++|++....
T Consensus 191 ~p~~~~~-~~~~~~~~~~~~~~g~~~~~~~~a~~~~-~~i~~v~~~l~e~~~~----~pGs~VE~K~~svavHYR~a~~~ 264 (384)
T PLN02580 191 GPVRESV-SNDHPNCIKSTDQQGKEVNLFQPASEFL-PMIDEVFRSLVESTKD----IKGAKVENHKFCVSVHYRNVDEK 264 (384)
T ss_pred cCCCCcc-cccccccccccccccccccccccchhhh-hhHHHHHHHHHHHhcc----CCCCEEEecCcEEEEEeCCCCch
Confidence 6522110 0111110 011222 2223333332221111 2334445677899999975432
Q ss_pred --hhhHHHHHHHHHhcCCeEEEEEecCCeEEEEec-CCCCHHHHHHHHHHHhCCCCCC-E--EEEeCCCCCCChHHhhcC
Q 001705 891 --TRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVP-SFASRIQALRYLSIRWGIDLSK-M--VVFVGEKGDTDYEDLLVG 964 (1024)
Q Consensus 891 --~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p-~gasKg~AL~~L~~~~gi~~~~-v--vafiGDs~N~D~~~Ml~~ 964 (1024)
....+++...+... ..+.++ ++..++||.| .++|||.|+++|++++|++.++ + ++ +||+.| | ++||+.
T Consensus 265 ~~~~~~~~l~~~l~~~-~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~-iGDD~T-D-edmF~~ 338 (384)
T PLN02580 265 NWPLVAQCVHDVLKKY-PRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIY-IGDDRT-D-EDAFKV 338 (384)
T ss_pred HHHHHHHHHHHHHHhC-CceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEE-ECCCch-H-HHHHHh
Confidence 12223334334332 224443 3334999999 5999999999999999998764 3 45 599999 9 999995
Q ss_pred -----CCceEEecCCCCCChHHH
Q 001705 965 -----LHKTLILRGSVMYGSEKL 982 (1024)
Q Consensus 965 -----ag~gVaMgna~~NA~~el 982 (1024)
.|+||+|+ ||.++.
T Consensus 339 L~~~~~G~~I~Vg----n~~~~t 357 (384)
T PLN02580 339 LREGNRGYGILVS----SVPKES 357 (384)
T ss_pred hhccCCceEEEEe----cCCCCc
Confidence 59999999 876543
No 123
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.72 E-value=2.6e-15 Score=171.08 Aligned_cols=244 Identities=12% Similarity=0.111 Sum_probs=162.4
Q ss_pred Ccc-eEEEEcCCCh-H--HHHHHHH--ccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCC
Q 001705 303 TWP-YVIHGHYADA-G--EVAAHLS--GALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASE 376 (1024)
Q Consensus 303 ~~p-DvIh~h~~~~-~--~~a~~l~--~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad 376 (1024)
.++ |+||+|++.. + +...++. ++.++|+|+++|++++..+.. . .+ + ..++...++.||
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~---------~~--~--~~~~~~~~~~aD 125 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---N---------YY--L--MKEEIDMLNLAD 125 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---c---------ch--h--hHHHHHHHHhCC
Confidence 345 9999998743 2 1122222 234899999999986542210 0 00 1 223677899999
Q ss_pred EEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCcccc
Q 001705 377 MVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQ 456 (1024)
Q Consensus 377 ~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~ 456 (1024)
.|+++|+...+.+... |....++.++++..+.....+..
T Consensus 126 ~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~~------------------ 164 (333)
T PRK09814 126 VLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELVK------------------ 164 (333)
T ss_pred EEEECCHHHHHHHHHc-----------------------CCCcCceEecccccccccccccc------------------
Confidence 9999999887765321 11123677776654332110000
Q ss_pred ccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHH
Q 001705 457 SKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTV 535 (1024)
Q Consensus 457 ~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i 535 (1024)
.....+.|+|+|++....++ .. . .+++.| ++|.++...
T Consensus 165 ----------------~~~~~~~i~yaG~l~k~~~l----~~---~-----~~~~~l~i~G~g~~~~------------- 203 (333)
T PRK09814 165 ----------------TPSFQKKINFAGNLEKSPFL----KN---W-----SQGIKLTVFGPNPEDL------------- 203 (333)
T ss_pred ----------------cccCCceEEEecChhhchHH----Hh---c-----CCCCeEEEECCCcccc-------------
Confidence 01345689999999843321 11 1 134444 788876421
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecC-C----------CCCCCHHHHHHHHcCCcEEEcCCCCc
Q 001705 536 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPA-L----------VEPFGLTIIEAAAYGLPVVATKNGGP 604 (1024)
Q Consensus 536 ~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps-~----------~Egfgl~llEAmA~G~PVVat~~Gg~ 604 (1024)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.|+.
T Consensus 204 -------~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~ 271 (333)
T PRK09814 204 -------ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAI 271 (333)
T ss_pred -------ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccH
Confidence 244689999999999999999874 333321 1 13578899999999999999999999
Q ss_pred hhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 001705 605 VDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCR 660 (1024)
Q Consensus 605 ~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~ 660 (1024)
.++|+++.+|++++ +.++++++|.++ .++.+++|++++++..+.+.--...+
T Consensus 272 ~~~V~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~ 323 (333)
T PRK09814 272 ADFIVENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTK 323 (333)
T ss_pred HHHHHhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 99999999999998 788999999985 35778899999998875444333333
No 124
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.71 E-value=1.6e-16 Score=183.36 Aligned_cols=283 Identities=16% Similarity=0.107 Sum_probs=178.9
Q ss_pred HHHHHHHHHhhhcCCCCCcceEEEEcC-CChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHH
Q 001705 286 IVNMARAIGEQVNGGKPTWPYVIHGHY-ADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRR 364 (1024)
Q Consensus 286 ~~~~~~~l~~~~~~g~~~~pDvIh~h~-~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~ 364 (1024)
+..+.+.+.+ .+||+||+|. ...++.+++++..+++|++++.+++-. .+.....+. ...|.
T Consensus 75 ~~~l~~~l~~-------~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s--------~~~~~~~~~---~~~r~ 136 (365)
T TIGR00236 75 LEGLEELLLE-------EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRT--------GDRYSPMPE---EINRQ 136 (365)
T ss_pred HHHHHHHHHH-------cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCc--------CCCCCCCcc---HHHHH
Confidence 3445555554 5899999995 466677888888889999876554300 011000000 01111
Q ss_pred HHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCC-CCCCccccCCCCCC
Q 001705 365 IEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGM-DFSYVTTQDTMGGD 443 (1024)
Q Consensus 365 i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGi-D~~~f~~~~~~~~~ 443 (1024)
...+.||.++++|+...+.+.+. |....++.+++|++ |...+....
T Consensus 137 -----~~~~~ad~~~~~s~~~~~~l~~~-----------------------G~~~~~I~vign~~~d~~~~~~~~----- 183 (365)
T TIGR00236 137 -----LTGHIADLHFAPTEQAKDNLLRE-----------------------NVKADSIFVTGNTVIDALLTNVEI----- 183 (365)
T ss_pred -----HHHHHHHhccCCCHHHHHHHHHc-----------------------CCCcccEEEeCChHHHHHHHHHhh-----
Confidence 12335899999999887775332 22334899999996 432211110
Q ss_pred ccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe-CC-CCCCCHHHHHHHHhhccccCCCCcEEEE-EecCCC
Q 001705 444 TDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS-RP-DPKKNVTTLLKAFGECQPLRELANMTLI-LGNRDD 520 (1024)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg-Rl-d~~Kgi~~ll~A~~~l~~l~~~~~l~LI-vG~~~~ 520 (1024)
+.......++. .+++++++.+ |. ...||+..+++|+.++. ...+++.++ ++.+..
T Consensus 184 ------------------~~~~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~--~~~~~~~~vi~~~~~~ 241 (365)
T TIGR00236 184 ------------------AYSSPVLSEFG--EDKRYILLTLHRRENVGEPLENIFKAIREIV--EEFEDVQIVYPVHLNP 241 (365)
T ss_pred ------------------ccchhHHHhcC--CCCCEEEEecCchhhhhhHHHHHHHHHHHHH--HHCCCCEEEEECCCCh
Confidence 00001111221 2345666666 43 24589999999999884 334555543 333211
Q ss_pred cccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-
Q 001705 521 IEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT- 599 (1024)
Q Consensus 521 ~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat- 599 (1024)
..... +...++..++|.|++.++..++..+|+.| |+++.+| |..++|||+||+|||++
T Consensus 242 ---------~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~ 300 (365)
T TIGR00236 242 ---------VVREP---LHKHLGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLR 300 (365)
T ss_pred ---------HHHHH---HHHHhCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECC
Confidence 01111 22334556789999999999999999999 8998877 56689999999999996
Q ss_pred CCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 001705 600 KNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLS 664 (1024)
Q Consensus 600 ~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~ 664 (1024)
+.|+..+++..+ .++++ +.|+++++++|.+++++++.+++++.+...+....+++++++...+
T Consensus 301 ~~~~~~e~~~~g-~~~lv-~~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 301 DTTERPETVEAG-TNKLV-GTDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CCCCChHHHhcC-ceEEe-CCCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 678888888755 56667 5799999999999999999888887665322234455555544433
No 125
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.68 E-value=3.7e-15 Score=172.92 Aligned_cols=171 Identities=16% Similarity=0.137 Sum_probs=116.3
Q ss_pred hhhCCCCCcEEEE-Ee-CCCCC-CCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHc-CC
Q 001705 470 RFFTNPHKPTILA-LS-RPDPK-KNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKY-DL 544 (1024)
Q Consensus 470 ~~~~~~~~~~Il~-vg-Rld~~-Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~-~l 544 (1024)
++..++++++|+. .| |.... ++++.+++|+..+. +..+++.+ ++|+.+. ...++.+.+.++ ++
T Consensus 179 ~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~--~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 179 RLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQ--QRYPDLRFVLPLVNPK----------RREQIEEALAEYAGL 246 (380)
T ss_pred HcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCChh----------hHHHHHHHHhhcCCC
Confidence 3444556676544 34 44343 45789999999884 33456665 4443121 234455556665 54
Q ss_pred CCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-----------------CCCCchhh
Q 001705 545 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT-----------------KNGGPVDI 607 (1024)
Q Consensus 545 ~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat-----------------~~Gg~~ei 607 (1024)
. +.+. ..++..+|+.| |++|.+| |.+.+|||+||+|+|++ +.++.+++
T Consensus 247 ~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 247 E--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred C--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 3 4442 35899999999 9999987 88889999999999987 56677788
Q ss_pred hccCC--cEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 608 LKALN--NGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 608 i~~~~--~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+.++. .+++.+..|+++++++|.++++|++.++++++++.+..+.. -..-+++..+.+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 76653 45777888999999999999999999999999876555332 12233444444443
No 126
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.68 E-value=3.2e-15 Score=172.15 Aligned_cols=250 Identities=17% Similarity=0.108 Sum_probs=163.5
Q ss_pred CcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeC
Q 001705 303 TWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 303 ~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
.+||+||+|.. ...+.+.+.++..++|++++.|+.... ..+ .+. ...+ ..+.+.+|.++++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~------~~~----~~~---~~~r-----~~~~~~ad~~~~~ 148 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSF------DRG----MPD---EENR-----HAIDKLSDLHFAP 148 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccC------CCC----CCc---hHHH-----HHHHHHhhhccCC
Confidence 47999999964 455666777777899999877653110 001 010 1111 1235678999999
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCC-CCCCccccCCCCCCccccccccCccccccCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGM-DFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
|+...+.+.+. |....++.+++|++ |...+.+...
T Consensus 149 s~~~~~~l~~~-----------------------G~~~~kI~vign~v~d~~~~~~~~~--------------------- 184 (363)
T cd03786 149 TEEARRNLLQE-----------------------GEPPERIFVVGNTMIDALLRLLELA--------------------- 184 (363)
T ss_pred CHHHHHHHHHc-----------------------CCCcccEEEECchHHHHHHHHHHhh---------------------
Confidence 98877664321 22334899999985 5433221110
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCCCC---CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRPDP---KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK 537 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~ 537 (1024)
.. ......+...++..++++.+|... .||++.+++|+.++.. . ++.+++++.+. ...++.+
T Consensus 185 -~~-~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~--~--~~~vi~~~~~~----------~~~~l~~ 248 (363)
T cd03786 185 -KK-ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAE--E--DVPVVFPNHPR----------TRPRIRE 248 (363)
T ss_pred -cc-chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh--c--CCEEEEECCCC----------hHHHHHH
Confidence 00 000112223344456778888774 7999999999998842 1 45554433221 1345566
Q ss_pred HHHHcCC-CCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccCCcEE
Q 001705 538 LIDKYDL-YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKALNNGL 615 (1024)
Q Consensus 538 ~i~~~~l-~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~~~Gl 615 (1024)
.+.++++ .++|.|.+....+++..+|+.| |++|.+|. | +..|||++|+|+|++.. +..++.+. +|+
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~---~g~ 316 (363)
T cd03786 249 AGLEFLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE---SGT 316 (363)
T ss_pred HHHhhccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh---eee
Confidence 6667665 6689999988888999999999 99999984 4 47899999999999975 44556665 344
Q ss_pred EeCC-CCHHHHHHHHHHHHhCHHHHHHH
Q 001705 616 LVDP-HDQNAIADALLKLLADKNMWSEC 642 (1024)
Q Consensus 616 lv~p-~d~~~la~aI~~ll~d~~~~~~~ 642 (1024)
.+.. .|+++++++|.++++++..++.+
T Consensus 317 ~~~~~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 317 NVLVGTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred EEecCCCHHHHHHHHHHHhcCchhhhcC
Confidence 4433 37999999999999998776655
No 127
>PLN02151 trehalose-phosphatase
Probab=99.66 E-value=2e-15 Score=168.23 Aligned_cols=199 Identities=15% Similarity=0.200 Sum_probs=131.2
Q ss_pred EEEEecCCCCC----CCch-hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceE
Q 001705 751 VIAADCYDSDG----NTTE-TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 751 lIa~DlDGTl~----~~~~-~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I 825 (1024)
++++|+||||. +|+. .++++++++|++|.+ +..++|+|||++..+..++...++ +++++||+++
T Consensus 100 ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-----~~~vaIvSGR~~~~l~~~~~~~~l------~laGsHG~e~ 168 (354)
T PLN02151 100 VMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-----CFPTAIVSGRCREKVSSFVKLTEL------YYAGSHGMDI 168 (354)
T ss_pred EEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-----CCCEEEEECCCHHHHHHHcCCccc------eEEEeCCcee
Confidence 44499999977 6755 789999999999985 468999999999999999865444 6999999999
Q ss_pred EcCCCccccCcchh-------hhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHH
Q 001705 826 YFPWRDMVADGDYE-------AHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~-------~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 898 (1024)
..+.+. ..|. ......|. +.+..++..+...... .+....+.+.+++++|++..... ...++.
T Consensus 169 ~~p~~g----~~~~~~~~~~~~~~~~~~~-~~i~~v~~~l~~~~~~----~pG~~VE~K~~slavHYR~a~~~-~~~~l~ 238 (354)
T PLN02151 169 KGPEQG----SKYKKENQSLLCQPATEFL-PVINEVYKKLVEKTKS----IPGAKVENNKFCASVHFRCVEEN-KWSDLA 238 (354)
T ss_pred ecCCCC----ccccccccccccccchhhH-HHHHHHHHHHHHHHhc----CCCCEEEecCcEEEEEeCCCChH-HHHHHH
Confidence 865211 1121 11122232 3333333333211111 23344456778999999765421 223344
Q ss_pred HHHHhcCCeE-EEEEecCCeEEEEecC-CCCHHHHHHHHHHHhCCCCC--CEEEEeCCCCCCChHHhhcCC-----CceE
Q 001705 899 QRLRMRGFRC-NLVYTRAGSRLNVVPS-FASRIQALRYLSIRWGIDLS--KMVVFVGEKGDTDYEDLLVGL-----HKTL 969 (1024)
Q Consensus 899 ~~L~~~~~~~-~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~~gi~~~--~vvafiGDs~N~D~~~Ml~~a-----g~gV 969 (1024)
+.+....... .+...++.+.+||.|. +++||.|+++|++.++..-. .+++|+||+.+ | ++||+.+ |.||
T Consensus 239 ~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-EDaF~~L~~~~~G~gI 316 (354)
T PLN02151 239 NQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-EDAFKILRDKKQGLGI 316 (354)
T ss_pred HHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-HHHHHHHhhcCCCccE
Confidence 4433211111 1233455569999995 99999999999999886532 45677899999 9 9999853 6778
Q ss_pred Eec
Q 001705 970 ILR 972 (1024)
Q Consensus 970 aMg 972 (1024)
.++
T Consensus 317 ~Vg 319 (354)
T PLN02151 317 LVS 319 (354)
T ss_pred Eec
Confidence 887
No 128
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=4.9e-13 Score=143.12 Aligned_cols=402 Identities=16% Similarity=0.127 Sum_probs=247.4
Q ss_pred CCCceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCC
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSD 245 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~ 245 (1024)
+.++-+++++.... .||. . ....=|..|++.| ++|+++.-..+-| -+.+
T Consensus 9 ~~~k~ra~vvVLGD--------vGRS------P-RMqYHA~Sla~~g--f~VdliGy~~s~p---------~e~l----- 57 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGD--------VGRS------P-RMQYHALSLAKLG--FQVDLIGYVESIP---------LEEL----- 57 (444)
T ss_pred ccccceEEEEEecc--------cCCC------h-HHHHHHHHHHHcC--CeEEEEEecCCCC---------hHHH-----
Confidence 34455677666431 3442 2 3344678899999 9999996653212 1211
Q ss_pred CCCCCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC---ChHHHHHHH
Q 001705 246 GTGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA---DAGEVAAHL 322 (1024)
Q Consensus 246 ~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~---~~~~~a~~l 322 (1024)
-..+.++|+.+|.-|...+.++ +....+....++...+..++.. ..||+|.++++ ....++.+.
T Consensus 58 -~~hprI~ih~m~~l~~~~~~p~---------~~~l~lKvf~Qfl~Ll~aL~~~---~~~~~ilvQNPP~iPtliv~~~~ 124 (444)
T KOG2941|consen 58 -LNHPRIRIHGMPNLPFLQGGPR---------VLFLPLKVFWQFLSLLWALFVL---RPPDIILVQNPPSIPTLIVCVLY 124 (444)
T ss_pred -hcCCceEEEeCCCCcccCCCch---------hhhhHHHHHHHHHHHHHHHHhc---cCCcEEEEeCCCCCchHHHHHHH
Confidence 2357999999987665322222 1112222222222222222222 35899999987 355666667
Q ss_pred HccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHH
Q 001705 323 SGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLER 402 (1024)
Q Consensus 323 ~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r 402 (1024)
+...+.+++...|+++.. +.--+..|.... .-++.++. |+..-+.||.-.|+|+.+.+++.+.++-
T Consensus 125 ~~l~~~KfiIDWHNy~Ys-l~l~~~~g~~h~----lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi------- 190 (444)
T KOG2941|consen 125 SILTGAKFIIDWHNYGYS-LQLKLKLGFQHP----LVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGI------- 190 (444)
T ss_pred HHHhcceEEEEehhhHHH-HHHHhhcCCCCc----hHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCC-------
Confidence 777899999999999876 333334454433 22333433 6777889999999999888776443321
Q ss_pred HHHHhhhcCccccCCCCCcEEEeCCCCCCCC--ccccCCCCCCccccccccCccccccCCCCcchHHHhh------hhCC
Q 001705 403 KLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY--VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMR------FFTN 474 (1024)
Q Consensus 403 ~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~------~~~~ 474 (1024)
.+-..+|.++..+ |..+|..+ |.+... +-.....+... ...-.......+ +...
T Consensus 191 ------~ra~v~YDrPps~----~~~l~~~H~lf~~l~~-d~~~f~ar~~q-------~~~~~~taf~~k~~s~~v~~~~ 252 (444)
T KOG2941|consen 191 ------NRAKVLYDRPPSK----PTPLDEQHELFMKLAG-DHSPFRAREPQ-------DKALERTAFTKKDASGDVQLLP 252 (444)
T ss_pred ------ceeEEEecCCCCC----CCchhHHHHHHhhhcc-ccchhhhcccc-------cchhhhhhHhhhcccchhhhcc
Confidence 1122333333320 11111100 211110 00000000000 000000001111 1112
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHhhc-----cccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCE
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGEC-----QPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQV 548 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l-----~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V 548 (1024)
....++++.-...|..++..|++|+... .+-...|++.. |-|.||. .+...+.|+++++...-
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~ 321 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQ 321 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhccccee
Confidence 2334666777789999999999999833 22245577765 5577764 45566888999998766
Q ss_pred EeCCCCCCCCHHHHHHHhhcCCcEEEecCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHH
Q 001705 549 AYPKHHKQSDVPDIYRLAAKTKGVFINPALV-EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIAD 627 (1024)
Q Consensus 549 ~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~-Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~ 627 (1024)
....++..+|.+.+++.|+ -+|++.+|.. =-.|+++.....||+||+|-+.....|+|.++.||++++ |.+++|+
T Consensus 322 ~~tpWL~aEDYP~ll~saD--lGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ 397 (444)
T KOG2941|consen 322 VCTPWLEAEDYPKLLASAD--LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAE 397 (444)
T ss_pred eeecccccccchhHhhccc--cceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHH
Confidence 6689999999999999992 2344555543 356899999999999999999999999999999999998 9999999
Q ss_pred HHHHHHh----CHHHHHHHHHHHHHHHhcCCHHHHH
Q 001705 628 ALLKLLA----DKNMWSECRKNGLKNIHRFSWPEHC 659 (1024)
Q Consensus 628 aI~~ll~----d~~~~~~~~~~~~~~~~~fsw~~~a 659 (1024)
.|..+++ +.++..+..+++++. +...|+..-
T Consensus 398 ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~~~W 432 (444)
T KOG2941|consen 398 QLQMLFKNFPDNADELNQLKKNLREE-QELRWDESW 432 (444)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHHHHH
Confidence 9999999 788888888888887 455565433
No 129
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.57 E-value=4.1e-14 Score=152.30 Aligned_cols=204 Identities=13% Similarity=0.165 Sum_probs=139.4
Q ss_pred CCCCcccceeEEEEEecCCCCCC----C-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCC
Q 001705 740 THSPGRRQMLIVIAADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDF 814 (1024)
Q Consensus 740 ~~~~~~~~rlllIa~DlDGTl~~----~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~ 814 (1024)
..|...++++++ +|.||||.. | ...++++++++|+.|.++ +.+.++|+|||+..++..++.-.++
T Consensus 11 ~~~~~a~~~~~~--lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i----- 80 (266)
T COG1877 11 EPYLNARKRLLF--LDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI----- 80 (266)
T ss_pred cccccccceEEE--EeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc-----
Confidence 344467788888 788888443 4 345679999999999998 6788999999999999999986555
Q ss_pred CEEEecCCceEEcCCCccccCcchhhhhcc---cCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCch
Q 001705 815 DAIVCNSGSELYFPWRDMVADGDYEAHVEY---RWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAET 891 (1024)
Q Consensus 815 d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~---~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 891 (1024)
++||+||+++..++|.. |...... .|. +.+..+++.+...+++ ...+.+.+.+.||+++....
T Consensus 81 -~l~aehGa~~r~~~g~~-----~~~~~~~~~~~~~-~~v~~~l~~~v~r~pG-------s~iE~K~~a~~~Hyr~a~~~ 146 (266)
T COG1877 81 -GLIAEHGAEVRDPNGKW-----WINLAEEADLRWL-KEVAAILEYYVERTPG-------SYIERKGFAVALHYRNAEDD 146 (266)
T ss_pred -cEEEecceEEecCCCCe-----eEecCHHHHhhHH-HHHHHHHHHHhhcCCC-------eEEEEcCcEEEEeeccCCch
Confidence 59999999997764322 2211111 232 5667777777665443 33344567888888755422
Q ss_pred h-hHHHHHHHHHhcCCe-EEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC---
Q 001705 892 R-KVDNIRQRLRMRGFR-CNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH--- 966 (1024)
Q Consensus 892 ~-~~~el~~~L~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag--- 966 (1024)
. ....+.+........ ++++. +. ..+|+.|.++|||.++++++++...+- .+++|+||+.. | ++||+.+.
T Consensus 147 ~~~~~a~~~~~~~~~~~~~~v~~-gk-~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v~~~~ 221 (266)
T COG1877 147 EGAALALAEAATLINELKLRVTP-GK-MVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAVNKLD 221 (266)
T ss_pred hhHHHHHHHHHhccccccEEEEe-Cc-eEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhhccCC
Confidence 2 122222222222222 33333 33 499999999999999999999876654 46667899999 9 99999876
Q ss_pred -ceEEec
Q 001705 967 -KTLILR 972 (1024)
Q Consensus 967 -~gVaMg 972 (1024)
.+|-++
T Consensus 222 ~~~v~v~ 228 (266)
T COG1877 222 SITVKVG 228 (266)
T ss_pred CceEEec
Confidence 455555
No 130
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.57 E-value=1.7e-13 Score=167.71 Aligned_cols=187 Identities=17% Similarity=0.218 Sum_probs=148.7
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCC--CcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEE
Q 001705 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLREL--ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVA 549 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~--~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~ 549 (1024)
.+|+.++|+++.|+..+|+.+.++..+.++..+... ..+++ +.|.+...++ ....++..|..+.+.....++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~---~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADE---PGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccch---HHHHHHHHHHHHHhCcCCCCcEE
Confidence 357778999999999999999999998888543221 23555 5676643333 23567778888888777788999
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCC--------
Q 001705 550 YPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDP-------- 619 (1024)
Q Consensus 550 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p-------- 619 (1024)
|+.-.+-+--..++..| ||+++||+ +|++|++=+-||.-|.+-+++..|...|.. ++.|||.+.+
T Consensus 551 fle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~ 625 (778)
T cd04299 551 FLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDE 625 (778)
T ss_pred EEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChh
Confidence 87665544445566666 99999999 899999999999999999999999999987 7899999987
Q ss_pred ----CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 620 ----HDQNAIADALLKLLA----D------KNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 620 ----~d~~~la~aI~~ll~----d------~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
.|.++|-+.|.+.+. + |..|.++.+++++.+ ..|||.++++.|.+.+-
T Consensus 626 ~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 626 YQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 567777777765433 3 778999999999988 69999999999998775
No 131
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.56 E-value=7.3e-14 Score=166.35 Aligned_cols=167 Identities=15% Similarity=0.204 Sum_probs=143.5
Q ss_pred cEEEEEe--CCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCC---------
Q 001705 478 PTILALS--RPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY--------- 545 (1024)
Q Consensus 478 ~~Il~vg--Rld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~--------- 545 (1024)
..+++++ |+ +.|.++.+|+|+..+. .+.|+..| +.|.+.+ . .....++++++++++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~--~~~p~~~L~~~gy~~~-~-------~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYI--LKNPDYELKILTYNND-N-------DITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHH--hhCCCeEEEEEEecCc-h-------hHHHHHHHHHHHHHhhhchhhhccc
Confidence 3566666 99 9999999999999985 56788887 4666542 1 1235555666666555
Q ss_pred --------------------CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch
Q 001705 546 --------------------GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV 605 (1024)
Q Consensus 546 --------------------~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~ 605 (1024)
..|.|.|..+..++...|..| .++|.+|..|+|+ +.+||+++|+|+| +-|+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 689999998777999999999 7999999999999 9999999999999 66779
Q ss_pred hhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 001705 606 DILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSH 665 (1024)
Q Consensus 606 eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 665 (1024)
++|.++.||++| +|..+|+++|..+|.+++.|+++...+.+.+.+||-+.+.+++.+.
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 999999999999 4999999999999999999999999999999999999999888764
No 132
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.56 E-value=6.8e-15 Score=159.10 Aligned_cols=193 Identities=15% Similarity=0.220 Sum_probs=114.7
Q ss_pred EecCCCCCC----C-chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcC
Q 001705 754 ADCYDSDGN----T-TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFP 828 (1024)
Q Consensus 754 ~DlDGTl~~----~-~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~ 828 (1024)
+|.||||.. | ...+++.++++|++|.+. +++.|+|+|||+...+..+..-.++ .++++||+++..+
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~~ 72 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRRP 72 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEET
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEeccC
Confidence 799999554 3 345789999999999998 7788999999999996666554333 6999999999987
Q ss_pred CCccccCcchhh---hhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCch---hhHHHHHHHHH
Q 001705 829 WRDMVADGDYEA---HVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAET---RKVDNIRQRLR 902 (1024)
Q Consensus 829 ~~~~~~d~~~~~---~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~el~~~L~ 902 (1024)
.+ ..|.. .....|. +.+...+..+....++ .. .+.+.++++|+++..... ..+.++.+.+.
T Consensus 73 ~~-----~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~pG---~~----iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~ 139 (235)
T PF02358_consen 73 GG-----SEWTNLPADEDLEWK-DEVREILEYFAERTPG---SF----IEDKEFSVAFHYRNAPPEFGEAQARELAEQLR 139 (235)
T ss_dssp TE------EEE-TTGGGGHHHH-HHHHHHHTTHHHHSTT----E----EEEETTEEEEE-TTS-ST----THHHHHHHHH
T ss_pred cc-----ccccccccccchHHH-HHHHHHHHHHHhhccC---cE----EEECCeEEEEEecCCCcchhhhHHHHHHHHHH
Confidence 32 12221 2223354 5566677666554433 22 334567888998654422 24556655554
Q ss_pred hc---CCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCC--CCCEEEEeCCCCCCChHHhhcCC------CceEEe
Q 001705 903 MR---GFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGID--LSKMVVFVGEKGDTDYEDLLVGL------HKTLIL 971 (1024)
Q Consensus 903 ~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~--~~~vvafiGDs~N~D~~~Ml~~a------g~gVaM 971 (1024)
.. ...++++... ..+||.|.+++||.|+++|++.++.. ..++++|+||+.+ | ++||+.+ |.+|.+
T Consensus 140 ~~~~~~~~~~v~~g~--~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~f~~~~~~~~~~~~i~V 215 (235)
T PF02358_consen 140 EILASHPGLEVVPGK--KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDAFRALRELEEGGFGIKV 215 (235)
T ss_dssp HHHHHH-T-EEEE-S--SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHHHHTTTTS----EEEEE
T ss_pred HHHHhCCCEEEEECC--CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHHHHHHHhcccCCCCeEE
Confidence 32 1234444333 39999999999999999999988764 1234555699999 9 9999963 568888
Q ss_pred c
Q 001705 972 R 972 (1024)
Q Consensus 972 g 972 (1024)
+
T Consensus 216 ~ 216 (235)
T PF02358_consen 216 G 216 (235)
T ss_dssp S
T ss_pred E
Confidence 8
No 133
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.53 E-value=4.5e-13 Score=155.40 Aligned_cols=326 Identities=18% Similarity=0.244 Sum_probs=179.3
Q ss_pred cceEEEEcCCChHHHHHHHHccC-CCCEEEEeCCCchhhhHHHHhcCC-CCc--------chhhHHHHHHHHHHHHHhhh
Q 001705 304 WPYVIHGHYADAGEVAAHLSGAL-NVPMVLTGHSLGRNKFEQLLKQGR-LPK--------DINASYKIMRRIEAEELGLD 373 (1024)
Q Consensus 304 ~pDvIh~h~~~~~~~a~~l~~~~-~ipiV~t~H~l~~~~~~~l~~~g~-~~~--------~i~~~y~~~r~i~~e~~~l~ 373 (1024)
..-+.|+|-|++|....++++.. .+..|||.|..-... .+...+. +.. .....+.+..+.-.|+.+..
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR--~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~ 220 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGR--YLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAH 220 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHH--HHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHH
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhh--HhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHH
Confidence 45688999999988888877654 788999999862111 1111110 000 11122334455556888899
Q ss_pred cCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCc
Q 001705 374 ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGND 453 (1024)
Q Consensus 374 ~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~ 453 (1024)
.||.+.++|+-...+...+.+.- .=.|+|||++...|.... +.+.+-.
T Consensus 221 ~AdvFTTVSeITa~Ea~~LL~r~------------------------pDvV~pNGl~v~~~~~~~------efqnl~~-- 268 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAEHLLKRK------------------------PDVVTPNGLNVDKFPALH------EFQNLHA-- 268 (633)
T ss_dssp HSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT------HHHHHHH--
T ss_pred hcCeeeehhhhHHHHHHHHhCCC------------------------CCEEcCCCccccccccch------HHHHHHH--
Confidence 99999999866555543333220 237899999988774332 1111000
Q ss_pred cccccCCCCcchHHHhhhh-C----CCC-CcEEEEEeCCCC-CCCHHHHHHHHhhccccC--CCCc--EE-EEE------
Q 001705 454 RTQSKRNLPPMWSEVMRFF-T----NPH-KPTILALSRPDP-KKNVTTLLKAFGECQPLR--ELAN--MT-LIL------ 515 (1024)
Q Consensus 454 ~~~~~~~~p~~~~~~~~~~-~----~~~-~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l~--~~~~--l~-LIv------ 515 (1024)
.....+...++..+ . .++ ..+|...||... .||++.+|+|+.++...- ...+ ++ +|+
T Consensus 269 -----~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~ 343 (633)
T PF05693_consen 269 -----KAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN 343 (633)
T ss_dssp -----HHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE
T ss_pred -----HHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC
Confidence 00112222333221 1 233 345667889986 599999999999885321 1112 22 333
Q ss_pred -------------------------------------ecCCCcccccccchHH--------------------------H
Q 001705 516 -------------------------------------GNRDDIEDMSNSSSVV--------------------------L 532 (1024)
Q Consensus 516 -------------------------------------G~~~~~~~l~~~~~~~--------------------------~ 532 (1024)
|.-++.+++-.....+ -
T Consensus 344 ~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~ 423 (633)
T PF05693_consen 344 SFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSN 423 (633)
T ss_dssp EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT
T ss_pred CcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCcc
Confidence 2222222211100000 1
Q ss_pred HHHHHHHHHcCCCC------CEEe-CCCCCCC------CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc
Q 001705 533 TTVLKLIDKYDLYG------QVAY-PKHHKQS------DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT 599 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~------~V~~-~g~~~~~------el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat 599 (1024)
..|...+.++++.+ +|.| +-+++.. +..++.+.| |+.|+||.+||||.|.+|+.|+|+|.|.|
T Consensus 424 DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITT 499 (633)
T PF05693_consen 424 DPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITT 499 (633)
T ss_dssp -HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEE
T ss_pred CHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeec
Confidence 22333334444422 2344 3344433 578899999 99999999999999999999999999999
Q ss_pred CCCCchhhhcc-----CCcEEEe-C--CCCHH----HHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 600 KNGGPVDILKA-----LNNGLLV-D--PHDQN----AIADALLKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 600 ~~Gg~~eii~~-----~~~Gllv-~--p~d~~----~la~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
+..|...++.. ...|+.| + -.+.+ ++++.|.+... ++..+..+++++.+.....+|......|.+.+
T Consensus 500 nLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 500 NLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp TTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred cchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99888776653 2357765 2 22444 45555555554 45566777777776668999999999999999
Q ss_pred HHhhhc
Q 001705 667 EHSRNR 672 (1024)
Q Consensus 667 ~~~~~~ 672 (1024)
.-.+.+
T Consensus 580 ~~AL~~ 585 (633)
T PF05693_consen 580 DLALRR 585 (633)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876654
No 134
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.41 E-value=2.2e-13 Score=133.75 Aligned_cols=131 Identities=31% Similarity=0.456 Sum_probs=93.8
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 477 KPTILALSRPDPKKNVTTLLK-AFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 477 ~~~Il~vgRld~~Kgi~~ll~-A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
.++|+++|++.+.|+++.+++ ++.++.+ ..|++.| |+|.+++ ++ .++ ..++|.|+|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~--~~p~~~l~i~G~~~~--~l-----------~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKE--KHPDIELIIIGNGPD--EL-----------KRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHH--HSTTEEEEEECESS---HH-----------CCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHH--HCcCEEEEEEeCCHH--HH-----------HHh-----cCCCEEEcCCH
Confidence 468999999999999999999 9999853 4477777 7788653 11 122 23589999998
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
+++.++|+.| |++++|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999985 67899999999999999999999 567777666778888 889999999999998
Q ss_pred hC
Q 001705 634 AD 635 (1024)
Q Consensus 634 ~d 635 (1024)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
No 135
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.36 E-value=1.7e-11 Score=123.79 Aligned_cols=245 Identities=16% Similarity=0.185 Sum_probs=150.7
Q ss_pred cceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceE
Q 001705 746 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSEL 825 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I 825 (1024)
++...||++|+||||+++ ..-.+....++.+|++. |+.|++||..+..++..+-+.++++ +-.+|+.||+.|
T Consensus 4 ~~~~~lIFtDlD~TLl~~-~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI 75 (274)
T COG3769 4 IQMPLLIFTDLDGTLLPH-SYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAI 75 (274)
T ss_pred cccceEEEEcccCcccCC-CCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceE
Confidence 455678889999998774 23334556778888887 9999999999999999999999986 346999999999
Q ss_pred EcCCCccccCcchh-----hhhcccCCchhHHHHHhhhhhccC-----CCCccccccc----------CCCCceEEEEEe
Q 001705 826 YFPWRDMVADGDYE-----AHVEYRWPGENVRSVVPRVARAED-----GAEDDIVGFV----------DASSSRCQSYSI 885 (1024)
Q Consensus 826 ~~~~~~~~~d~~~~-----~~i~~~w~~~~v~~~l~~~~~~~~-----~~~~~~~~~~----------~~~~~~k~~~~~ 885 (1024)
|-+.+-+..+.... .+++-.-.-+.++..+..+...+. ..+...++.. .....|......
T Consensus 76 ~~p~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~ 155 (274)
T COG3769 76 YLPKGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIW 155 (274)
T ss_pred EecccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheee
Confidence 98733221111111 111111122334444433332210 0000000000 001112222221
Q ss_pred cCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHh-CCCCCC-EEEEeCCCCCCChHHhhc
Q 001705 886 KPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRW-GIDLSK-MVVFVGEKGDTDYEDLLV 963 (1024)
Q Consensus 886 ~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~-gi~~~~-vvafiGDs~N~D~~~Ml~ 963 (1024)
.+.+ ....++...|+..++ .+.++..|--|+.....||+|+..+++.+ ..+..+ +++ +||+.| | .+||+
T Consensus 156 rs~d--~~~~~~~~~L~e~gl----t~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~-~GDg~n-D-~Pl~e 226 (274)
T COG3769 156 RSSD--ERMAQFTARLNERGL----TFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLG-LGDGPN-D-APLLE 226 (274)
T ss_pred cccc--hHHHHHHHHHHhcCc----eEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEe-cCCCCC-c-ccHHH
Confidence 2111 134456667776543 44555558889999999999999999765 345555 556 699999 9 99999
Q ss_pred CCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 964 GLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 964 ~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
...+.+.++|.. -+-.+..+ +-|-+..+++.-..+|..+.++++
T Consensus 227 v~d~AfiV~~ln----re~~~lv~----------~i~~vv~~~~~~~~~~~~e~~~~~ 270 (274)
T COG3769 227 VMDYAFIVKGLN----REGVHLVS----------SIPAVVERIQREGPEGWREGLDHF 270 (274)
T ss_pred hhhhheeecccc----hhhhhccc----------cchhheeeccccCchHHHHHhhhh
Confidence 999999999433 22222222 224455666777788998888876
No 136
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.34 E-value=1.1e-10 Score=135.53 Aligned_cols=250 Identities=16% Similarity=0.029 Sum_probs=146.9
Q ss_pred CcceEEEEcCCCh-HHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeC
Q 001705 303 TWPYVIHGHYADA-GEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 303 ~~pDvIh~h~~~~-~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
.+||+|+++++.. ....+..++.+|+|+++.+. - . ++...+ .+ -+.+.+.+|.|++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P--~---~waw~~-------------~~---~r~l~~~~d~v~~~ 145 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-P--Q---VWAWRK-------------WR---AKKIEKATDFLLAI 145 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-C--c---HhhcCc-------------ch---HHHHHHHHhHhhcc
Confidence 6899999998622 22233356677999997653 1 0 000000 00 12245688999999
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNL 461 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1024)
++.+.+.+.. .|+ +..++.|++-.... +..
T Consensus 146 ~~~e~~~~~~------------------~g~--------~~~~vGnPv~~~~~-~~~----------------------- 175 (385)
T TIGR00215 146 LPFEKAFYQK------------------KNV--------PCRFVGHPLLDAIP-LYK----------------------- 175 (385)
T ss_pred CCCcHHHHHh------------------cCC--------CEEEECCchhhhcc-ccC-----------------------
Confidence 8876554211 011 55667666522111 000
Q ss_pred CcchHHHhhhhCCCCCcEEEEE--eCCCC-CCCHHHHHHHHhhccccCCCCcEEE-E-EecCCCcccccccchHHHHHHH
Q 001705 462 PPMWSEVMRFFTNPHKPTILAL--SRPDP-KKNVTTLLKAFGECQPLRELANMTL-I-LGNRDDIEDMSNSSSVVLTTVL 536 (1024)
Q Consensus 462 p~~~~~~~~~~~~~~~~~Il~v--gRld~-~Kgi~~ll~A~~~l~~l~~~~~l~L-I-vG~~~~~~~l~~~~~~~~~~i~ 536 (1024)
+.....+.++..++++++|+.+ +|..+ .|++..+++|+..+. +..|++.+ + ++.+.. ...+.
T Consensus 176 ~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~--~~~p~~~~vi~~~~~~~-----------~~~~~ 242 (385)
T TIGR00215 176 PDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLE--QQEPDLRRVLPVVNFKR-----------RLQFE 242 (385)
T ss_pred CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHH--HhCCCeEEEEEeCCchh-----------HHHHH
Confidence 0011123344455677877765 37766 789999999999885 34466654 3 333221 12334
Q ss_pred HHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCchh---------
Q 001705 537 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPVD--------- 606 (1024)
Q Consensus 537 ~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~e--------- 606 (1024)
+....++....|.++.. +...+|++| |++|.+| |.+.+|+|++|+|+|... .....-
T Consensus 243 ~~~~~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~ 309 (385)
T TIGR00215 243 QIKAEYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKT 309 (385)
T ss_pred HHHHHhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcC
Confidence 44455555445655433 567899999 9999999 777789999999998872 222221
Q ss_pred -------hhccCCcE--EEeCCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Q 001705 607 -------ILKALNNG--LLVDPHDQNAIADALLKLLADK----NMWSECRKNGLKNI 650 (1024)
Q Consensus 607 -------ii~~~~~G--llv~p~d~~~la~aI~~ll~d~----~~~~~~~~~~~~~~ 650 (1024)
++.+..-. ++=+.-+++.+++++.+++.|+ +.++++.+...+..
T Consensus 310 ~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00215 310 DYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR 366 (385)
T ss_pred CeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 12111111 1112346899999999999999 87777766655543
No 137
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.27 E-value=2.2e-11 Score=121.78 Aligned_cols=160 Identities=28% Similarity=0.366 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcc
Q 001705 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPY 274 (1024)
Q Consensus 195 GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~ 274 (1024)
||+++++.+|+++|++.| |+|+|+|+...... .+ ....++.++++|..+... .+..
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~--------~~--------~~~~~~~~~~~~~~~~~~------~~~~ 56 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPED--------DE--------EEEDGVRVHRLPLPRRPW------PLRL 56 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG---------S--------EEETTEEEEEE--S-SSS------GGGH
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCcc--------cc--------cccCCceEEeccCCccch------hhhh
Confidence 899999999999999999 99999997643221 01 123489999999755421 1111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcc
Q 001705 275 IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKD 354 (1024)
Q Consensus 275 ~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~ 354 (1024)
+ .+.. .+.+.+. .. ..+||+||+|++..+.++.++++..++|+|++.|+..... +
T Consensus 57 ~-~~~~-------~~~~~l~--~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-------~----- 111 (160)
T PF13579_consen 57 L-RFLR-------RLRRLLA--AR---RERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR-------G----- 111 (160)
T ss_dssp C-CHHH-------HHHHHCH--HC---T---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------------
T ss_pred H-HHHH-------HHHHHHh--hh---ccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh-------c-----
Confidence 1 1111 1111110 01 2579999999987777777777567999999999753221 0
Q ss_pred hhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCC
Q 001705 355 INASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPG 428 (1024)
Q Consensus 355 i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnG 428 (1024)
......+++.+ ++..++.||.|+++|+...+.+.. +. . +..++.|||||
T Consensus 112 ~~~~~~~~~~~--~~~~~~~ad~vi~~S~~~~~~l~~-~g-~---------------------~~~ri~vipnG 160 (160)
T PF13579_consen 112 SRWKRRLYRWL--ERRLLRRADRVIVVSEAMRRYLRR-YG-V---------------------PPDRIHVIPNG 160 (160)
T ss_dssp --HHHHHHHHH--HHHHHHH-SEEEESSHHHHHHHHH-H-------------------------GGGEEE----
T ss_pred cchhhHHHHHH--HHHHHhcCCEEEECCHHHHHHHHH-hC-C---------------------CCCcEEEeCcC
Confidence 01112233333 678899999999999988887655 32 2 22399999998
No 138
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.26 E-value=2.9e-11 Score=110.72 Aligned_cols=91 Identities=22% Similarity=0.387 Sum_probs=86.0
Q ss_pred EEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-
Q 001705 572 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI- 650 (1024)
Q Consensus 572 v~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~- 650 (1024)
++++|+..++++..++|+||||+|||++..++..+++.++..+++++ |++++.++|..++++|++++++++++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999888999998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 001705 651 HRFSWPEHCRNYLS 664 (1024)
Q Consensus 651 ~~fsw~~~a~~~l~ 664 (1024)
++|+|++.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999998863
No 139
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.25 E-value=9.4e-09 Score=117.93 Aligned_cols=308 Identities=11% Similarity=0.097 Sum_probs=172.9
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
|||+..-.+.++++|.+.| |+|.++++... ...+.+. ..|+.++.++..+. ++...|.
T Consensus 11 TGGHi~Pala~a~~l~~~g--~~v~~vg~~~~---------~e~~l~~-------~~g~~~~~~~~~~l----~~~~~~~ 68 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDN--WDISYIGSHQG---------IEKTIIE-------KENIPYYSISSGKL----RRYFDLK 68 (352)
T ss_pred cHHHHHHHHHHHHHHHhCC--CEEEEEECCCc---------cccccCc-------ccCCcEEEEeccCc----CCCchHH
Confidence 8999999999999999998 99999987531 1111111 12566666664322 1111111
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCc
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPK 353 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~ 353 (1024)
.+. +.........+..+.+.+ .+||+||++....+..+.+.++.+++|++++-.+..+
T Consensus 69 ~~~-~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~-------------- 126 (352)
T PRK12446 69 NIK-DPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP-------------- 126 (352)
T ss_pred HHH-HHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc--------------
Confidence 111 111112222222233333 6899999988767777778888889998775543211
Q ss_pred chhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCC
Q 001705 354 DINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSY 433 (1024)
Q Consensus 354 ~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~ 433 (1024)
. ... +...+.|+.|+++-+...+. |.. .++.+.-|.|..+.
T Consensus 127 --g----~~n-----r~~~~~a~~v~~~f~~~~~~-------~~~---------------------~k~~~tG~Pvr~~~ 167 (352)
T PRK12446 127 --G----LAN-----KIALRFASKIFVTFEEAAKH-------LPK---------------------EKVIYTGSPVREEV 167 (352)
T ss_pred --c----HHH-----HHHHHhhCEEEEEccchhhh-------CCC---------------------CCeEEECCcCCccc
Confidence 0 111 12456778887754321111 111 16666666554432
Q ss_pred ccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHH-HHHHhhccccCCCCcEE
Q 001705 434 VTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTL-LKAFGECQPLRELANMT 512 (1024)
Q Consensus 434 f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~l-l~A~~~l~~l~~~~~l~ 512 (1024)
..... ......+...+++++||.+|.=-..+.+..+ .+++..+. ..-+++
T Consensus 168 ~~~~~--------------------------~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv 218 (352)
T PRK12446 168 LKGNR--------------------------EKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIV 218 (352)
T ss_pred ccccc--------------------------hHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEE
Confidence 21100 1112233345678888888765445556433 34444442 123343
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY 592 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~ 592 (1024)
.+.|..+ .++ .. ..+ ..+...++. .++++++|+.| |++|.- +-+.++.|++++
T Consensus 219 ~~~G~~~-~~~-----------~~---~~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E~~~~ 271 (352)
T PRK12446 219 HLCGKGN-LDD-----------SL---QNK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFEFLTL 271 (352)
T ss_pred EEeCCch-HHH-----------HH---hhc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHHHHHc
Confidence 4556432 111 11 111 122333442 25799999999 898864 347899999999
Q ss_pred CCcEEEcCCC-----Cc----hhhhccCCcEEEeCCC--CHHHHHHHHHHHHhCHHHHH
Q 001705 593 GLPVVATKNG-----GP----VDILKALNNGLLVDPH--DQNAIADALLKLLADKNMWS 640 (1024)
Q Consensus 593 G~PVVat~~G-----g~----~eii~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~ 640 (1024)
|+|+|.-... +- .+.+.....|..+... +++.++++|.+++.|++.++
T Consensus 272 g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~ 330 (352)
T PRK12446 272 QKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYK 330 (352)
T ss_pred CCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHH
Confidence 9999988542 11 2234444556666433 57899999999999986543
No 140
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.25 E-value=2.3e-11 Score=123.92 Aligned_cols=168 Identities=21% Similarity=0.272 Sum_probs=85.5
Q ss_pred CCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccC
Q 001705 192 SDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESL 271 (1024)
Q Consensus 192 ~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~l 271 (1024)
+..||.++++.+|+++|+++| |+|++++....++... . ........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~--------- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE-----------------E-LVKIFVKIPYPIR--------- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS-----------------T-EEEE---TT-SST---------
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh-----------------h-ccceeeeeecccc---------
Confidence 468999999999999999999 9999998875432210 0 0111111111110
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCC
Q 001705 272 WPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRL 351 (1024)
Q Consensus 272 wp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~ 351 (1024)
......+ .....+.+.+.+ .+||+||+|.+.....+..... ++|++++.|+.... .. ......
T Consensus 60 ~~~~~~~-----~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~--~~-~~~~~~ 122 (177)
T PF13439_consen 60 KRFLRSF-----FFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFE--RR-FLKSKL 122 (177)
T ss_dssp SS--HHH-----HHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH----HH-TTTTSC
T ss_pred cccchhH-----HHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccc--cc-cccccc
Confidence 0011111 112223333333 3699999998743333332222 89999999975421 00 001111
Q ss_pred CcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCC
Q 001705 352 PKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDF 431 (1024)
Q Consensus 352 ~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~ 431 (1024)
. .. . .+...+ +....+.+|.++|+|+...+++.. +. + +..++.|||||||.
T Consensus 123 ~-~~-~--~~~~~~--~~~~~~~~~~ii~vS~~~~~~l~~-~~-~---------------------~~~ki~vI~ngid~ 173 (177)
T PF13439_consen 123 S-PY-S--YLNFRI--ERKLYKKADRIIAVSESTKDELIK-FG-I---------------------PPEKIHVIYNGIDT 173 (177)
T ss_dssp C-CH-H--HHHHCT--THHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE----B-C
T ss_pred c-hh-h--hhhhhh--hhhHHhcCCEEEEECHHHHHHHHH-hC-C---------------------cccCCEEEECCccH
Confidence 1 11 1 111111 344578999999999988887655 32 1 22389999999999
Q ss_pred CCc
Q 001705 432 SYV 434 (1024)
Q Consensus 432 ~~f 434 (1024)
+.|
T Consensus 174 ~~F 176 (177)
T PF13439_consen 174 DRF 176 (177)
T ss_dssp CCH
T ss_pred HHc
Confidence 987
No 141
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.20 E-value=1.8e-08 Score=114.63 Aligned_cols=327 Identities=17% Similarity=0.166 Sum_probs=193.8
Q ss_pred CChHHHHHHHHHHHHHcCCCceE-EEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCC
Q 001705 194 TGGQVKYVVELARALANTEGVYR-VDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLW 272 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~-V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lw 272 (1024)
|||+..-..-|+++|.++| ++ |.++.... ...+.+ ....++.++-++.++...+. .|
T Consensus 10 TGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~----------~~e~~l------~~~~~~~~~~I~~~~~~~~~----~~ 67 (357)
T COG0707 10 TGGHVFPALALAEELAKRG--WEQVIVLGTGD----------GLEAFL------VKQYGIEFELIPSGGLRRKG----SL 67 (357)
T ss_pred CccchhHHHHHHHHHHhhC--ccEEEEecccc----------cceeee------ccccCceEEEEecccccccC----cH
Confidence 8999999999999999999 74 55552221 011111 11237888888876543322 22
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC
Q 001705 273 PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP 352 (1024)
Q Consensus 273 p~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~ 352 (1024)
..+... -..+.-..+..+.+.+ .+||+|.+........+.+.+..+++|++.+-.+.-..
T Consensus 68 ~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G------------ 127 (357)
T COG0707 68 KLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPG------------ 127 (357)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcc------------
Confidence 211111 1222233344444544 68999999777666677777788899999888765221
Q ss_pred cchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCC
Q 001705 353 KDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFS 432 (1024)
Q Consensus 353 ~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~ 432 (1024)
...++ ..+.|+.|.+.-.. ... + +. ..++.+.-+.|..+
T Consensus 128 ----~ank~---------~~~~a~~V~~~f~~-~~~----~--~~---------------------~~~~~~tG~Pvr~~ 166 (357)
T COG0707 128 ----LANKI---------LSKFAKKVASAFPK-LEA----G--VK---------------------PENVVVTGIPVRPE 166 (357)
T ss_pred ----hhHHH---------hHHhhceeeecccc-ccc----c--CC---------------------CCceEEecCcccHH
Confidence 11111 23456666554332 110 0 11 11466666666554
Q ss_pred CccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHh-hccccCCCCcE
Q 001705 433 YVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFG-ECQPLRELANM 511 (1024)
Q Consensus 433 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~-~l~~l~~~~~l 511 (1024)
.+. ... ...++....++++|+.+|.=-..+.+..++.... .+ .+ ++
T Consensus 167 ~~~-~~~---------------------------~~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l---~~--~~ 213 (357)
T COG0707 167 FEE-LPA---------------------------AEVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL---AN--RI 213 (357)
T ss_pred hhc-cch---------------------------hhhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh---hh--Ce
Confidence 432 110 0011111236888888887443333444443333 33 22 34
Q ss_pred EE--EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHH
Q 001705 512 TL--ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEA 589 (1024)
Q Consensus 512 ~L--IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEA 589 (1024)
.+ +.|... +.++.....+++. +...++ .++++++|+.| |++|.=+ -++|+-|.
T Consensus 214 ~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsRa----Ga~Ti~E~ 268 (357)
T COG0707 214 QVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISRA----GALTIAEL 268 (357)
T ss_pred EEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeCC----cccHHHHH
Confidence 44 334322 3444455555554 666777 56899999999 8988643 47999999
Q ss_pred HHcCCcEEEcCCCCc--------hhhhccCCcEEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHH
Q 001705 590 AAYGLPVVATKNGGP--------VDILKALNNGLLVDPHD--QNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHC 659 (1024)
Q Consensus 590 mA~G~PVVat~~Gg~--------~eii~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a 659 (1024)
.++|+|+|.-..+.. ...+.+...|++++-.+ ++.+++.|.+++++|+..++|..++++....-.-..++
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~ 348 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIA 348 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999998764433 22344455678886555 88999999999999999999998888765443334343
Q ss_pred HH
Q 001705 660 RN 661 (1024)
Q Consensus 660 ~~ 661 (1024)
..
T Consensus 349 ~~ 350 (357)
T COG0707 349 DL 350 (357)
T ss_pred HH
Confidence 33
No 142
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.16 E-value=4.1e-11 Score=130.26 Aligned_cols=206 Identities=20% Similarity=0.152 Sum_probs=108.4
Q ss_pred EEEEEecccccccCCCCCCCC-CCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCC-----
Q 001705 171 YIVLISMHGLVRGDNMEIGRD-SDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPS----- 244 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~-~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~----- 244 (1024)
||+||+++ ++ | ..+||....+..|+++|+++| |+|.|+++..........-..++..+....
T Consensus 1 kIl~vt~E---------~~-P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~ 68 (245)
T PF08323_consen 1 KILMVTSE---------YA-PFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVP 68 (245)
T ss_dssp EEEEE-S----------BT-TTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEE
T ss_pred CEEEEEcc---------cC-cccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEeccccccccc
Confidence 79999988 43 3 589999999999999999999 999999997632110000000000000000
Q ss_pred ----C-----CCCCCCeEEEEecCCCCCCccccccCCcc-hHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001705 245 ----D-----GTGSCGAYIIRIPCGARDKYIAKESLWPY-IHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD 314 (1024)
Q Consensus 245 ----~-----~~~~~gv~i~rip~~~~~~~~~k~~lwp~-~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~ 314 (1024)
. ....+|+.++.+... .++.+..+... -..+.+...+.. .+++++.+.+..- +.+|||||+|+|+
T Consensus 69 ~~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~rf~-~fs~a~le~~~~l-~~~pDIIH~hDW~ 143 (245)
T PF08323_consen 69 VGVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAERFA-FFSRAALELLKKL-GWKPDIIHCHDWH 143 (245)
T ss_dssp EE----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHHHHH-HHHHHHHHHHCTC-T-S-SEEEEECGG
T ss_pred cccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHHHHH-HHHHHHHHHHHhh-CCCCCEEEecCch
Confidence 0 011247777766532 23333333311 001112222221 3344444545441 3589999999999
Q ss_pred hHHHHHHHHccC-------CCCEEEEeCCCchhhh---HHHHhcCCCCcc--hhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 315 AGEVAAHLSGAL-------NVPMVLTGHSLGRNKF---EQLLKQGRLPKD--INASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 315 ~~~~a~~l~~~~-------~ipiV~t~H~l~~~~~---~~l~~~g~~~~~--i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
+++++.+++... ++|+|+|+|++..... ..+...|..... ....+.....+...+..+..||.|+|+|
T Consensus 144 tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS 223 (245)
T PF08323_consen 144 TALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVS 223 (245)
T ss_dssp GTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESS
T ss_pred HHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCC
Confidence 999999999875 5999999999733211 011001110000 0000000112223456788999999999
Q ss_pred HHHHHHHHhcc
Q 001705 383 RQEIEMQWGLY 393 (1024)
Q Consensus 383 ~~~~~~~~~~~ 393 (1024)
+.+++++..-+
T Consensus 224 ~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 224 PTYAREIQTPE 234 (245)
T ss_dssp HHHHHHTTSHH
T ss_pred HHHHHHHhCcc
Confidence 99999976544
No 143
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.08 E-value=1e-08 Score=119.86 Aligned_cols=194 Identities=15% Similarity=0.260 Sum_probs=141.4
Q ss_pred hcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccC
Q 001705 373 DASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGN 452 (1024)
Q Consensus 373 ~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~ 452 (1024)
...|.||++|+++.+.+..+++.. .++.++|-|+=+. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~-~~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-F-KKD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-e-ccc--------------
Confidence 688999999988777666554420 1667788776522 1 111
Q ss_pred ccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHH
Q 001705 453 DRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVL 532 (1024)
Q Consensus 453 ~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~ 532 (1024)
+...+-++.++ + ...|++++++. ...|++.|=+|.+.+ | .
T Consensus 279 ---------------------~r~~~~~l~~t---~----s~~I~~i~~Lv--~~lPd~~f~Iga~te---~-------s 318 (438)
T TIGR02919 279 ---------------------NKYRKQALILT---N----SDQIEHLEEIV--QALPDYHFHIAALTE---M-------S 318 (438)
T ss_pred ---------------------cCCcccEEEEC---C----HHHHHHHHHHH--HhCCCcEEEEEecCc---c-------c
Confidence 01233455555 1 88999999884 567888884476653 1 2
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccC
Q 001705 533 TTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKAL 611 (1024)
Q Consensus 533 ~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~ 611 (1024)
.+|.++ .++ .+.+.|+|.. ..++.++|..| |+++.++..|+|++++.||+.+|+|||+.+. -|+.+++.+
T Consensus 319 ~kL~~L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~- 389 (438)
T TIGR02919 319 SKLMSL-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS- 389 (438)
T ss_pred HHHHHH-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC-
Confidence 455666 666 4556666664 45799999999 9999999999999999999999999999884 456677754
Q ss_pred CcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHH
Q 001705 612 NNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWP 656 (1024)
Q Consensus 612 ~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~ 656 (1024)
|.+++++|+++|+++|.++|++++.+++.-..-++.+..-+.+
T Consensus 390 --g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~ 432 (438)
T TIGR02919 390 --ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE 432 (438)
T ss_pred --CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence 8999999999999999999999988887666655555444433
No 144
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.06 E-value=5.6e-10 Score=112.55 Aligned_cols=72 Identities=8% Similarity=0.131 Sum_probs=65.1
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIE 1006 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt 1006 (1024)
+|..++..+++++|+++++++++ ||+.| | ++|++.+|.+++|. |+.+.++..++ +++
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~v-GDs~~-D-~~~~~~ag~~~~v~----~~~~~~~~~a~----------------~i~ 132 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAYI-GDDLI-D-WPVMEKVGLSVAVA----DAHPLLIPRAD----------------YVT 132 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEEE-CCCHH-H-HHHHHHCCCeEecC----CcCHHHHHhCC----------------EEe
Confidence 38889999999999999999996 99999 9 99999999999999 99999999898 888
Q ss_pred cccChhH-HHHHHHhc
Q 001705 1007 ESYEPQD-LSAALKAI 1021 (1024)
Q Consensus 1007 ~~~~~dg-I~~aL~~~ 1021 (1024)
.+...+| ++++++++
T Consensus 133 ~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 133 RIAGGRGAVREVCELL 148 (154)
T ss_pred cCCCCCcHHHHHHHHH
Confidence 8887666 99998875
No 145
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.02 E-value=6.5e-10 Score=113.18 Aligned_cols=69 Identities=6% Similarity=0.084 Sum_probs=61.7
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIE 1006 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt 1006 (1024)
.|...++.+++++|++++++++| ||+.| | ++|++.+|+++||+ ||.++++..|+ +|+
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~i-GD~~n-D-i~~~~~ag~~~am~----nA~~~lk~~A~----------------~I~ 138 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCYV-GDDLV-D-LSMMKRVGLAVAVG----DAVADVKEAAA----------------YVT 138 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEEE-CCCHH-H-HHHHHHCCCeEECc----CchHHHHHhCC----------------EEc
Confidence 35678899999999999999997 99999 9 99999999999999 99999999999 898
Q ss_pred cccChhHHHHHH
Q 001705 1007 ESYEPQDLSAAL 1018 (1024)
Q Consensus 1007 ~~~~~dgI~~aL 1018 (1024)
..+..+|+...+
T Consensus 139 ~~~~~~g~v~e~ 150 (169)
T TIGR02726 139 TARGGHGAVREV 150 (169)
T ss_pred CCCCCCCHHHHH
Confidence 888888864444
No 146
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.98 E-value=9.9e-10 Score=114.06 Aligned_cols=137 Identities=12% Similarity=0.105 Sum_probs=107.2
Q ss_pred eeEEEEEecCCCCCCC-------chhhHHHHH---HHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEE
Q 001705 748 MLIVIAADCYDSDGNT-------TETFQATIK---NVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAI 817 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~-------~~~i~~~~~---~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~l 817 (1024)
.+.+|++|+||||+++ +..+...+. .+++.++++ |+.++|+|||+...+..+++.+++.. +
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~----Gi~v~I~T~~~~~~v~~~l~~lgl~~-----~ 90 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTS----GIEVAIITGRKSKLVEDRMTTLGITH-----L 90 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHC----CCEEEEEeCCCcHHHHHHHHHcCCce-----e
Confidence 3556679999997764 444444444 788888876 99999999999999998888866520 0
Q ss_pred EecCCceEEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHH
Q 001705 818 VCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNI 897 (1024)
Q Consensus 818 I~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el 897 (1024)
| . .
T Consensus 91 --------------------f---------------------------------------------~-g----------- 93 (183)
T PRK09484 91 --------------------Y---------------------------------------------Q-G----------- 93 (183)
T ss_pred --------------------e---------------------------------------------c-C-----------
Confidence 0 0 0
Q ss_pred HHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCC
Q 001705 898 RQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMY 977 (1024)
Q Consensus 898 ~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~N 977 (1024)
.-+|..+++.+++++|+++++++++ ||+.| | ++|++.+|++++|+ +
T Consensus 94 ---------------------------~~~k~~~l~~~~~~~gl~~~ev~~V-GDs~~-D-~~~a~~aG~~~~v~----~ 139 (183)
T PRK09484 94 ---------------------------QSNKLIAFSDLLEKLAIAPEQVAYI-GDDLI-D-WPVMEKVGLSVAVA----D 139 (183)
T ss_pred ---------------------------CCcHHHHHHHHHHHhCCCHHHEEEE-CCCHH-H-HHHHHHCCCeEecC----C
Confidence 0125678999999999999999996 99999 9 99999999999999 9
Q ss_pred ChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHHh
Q 001705 978 GSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALKA 1020 (1024)
Q Consensus 978 A~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~~ 1020 (1024)
+.+.++..|+ |++..+..+|....|.+
T Consensus 140 ~~~~~~~~a~----------------~v~~~~~g~g~~~el~~ 166 (183)
T PRK09484 140 AHPLLLPRAD----------------YVTRIAGGRGAVREVCD 166 (183)
T ss_pred hhHHHHHhCC----------------EEecCCCCCCHHHHHHH
Confidence 9888888888 88877777777655543
No 147
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.93 E-value=1.7e-07 Score=109.73 Aligned_cols=127 Identities=17% Similarity=0.105 Sum_probs=85.9
Q ss_pred CCCcEEEEEeCCCC---CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 475 PHKPTILALSRPDP---KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 475 ~~~~~Il~vgRld~---~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
.+.++++..|.... .+-...+++|+..+. ..+.+.+|...... ....++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~g~~~~~~-------------------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATLG-----QRAILSLGWGGLGA-------------------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcC-----CeEEEEccCccccc-------------------cCCCCceEEe
Confidence 44567778888743 344556666666541 23334555443210 2345689999
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhccCCcEEEeCCC--CHHHH
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKALNNGLLVDPH--DQNAI 625 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~~~~Gllv~p~--d~~~l 625 (1024)
+++++ ..+|..| |++|.- |-..++.||+++|+|+|....++- .+.+...+.|+.+++. +.+++
T Consensus 294 ~~~p~---~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l 362 (401)
T cd03784 294 DFVPH---DWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERL 362 (401)
T ss_pred CCCCH---HHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHH
Confidence 99754 5678888 899933 335899999999999999876652 3344555678877665 68999
Q ss_pred HHHHHHHHhCH
Q 001705 626 ADALLKLLADK 636 (1024)
Q Consensus 626 a~aI~~ll~d~ 636 (1024)
+++|.++++++
T Consensus 363 ~~al~~~l~~~ 373 (401)
T cd03784 363 AAALRRLLDPP 373 (401)
T ss_pred HHHHHHHhCHH
Confidence 99999999854
No 148
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.84 E-value=4.4e-09 Score=118.25 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeE
Q 001705 925 FASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAY 1004 (1024)
Q Consensus 925 gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~ 1004 (1024)
+..|+.+++.+++++|++++++++| ||+.| | ++|++.+|.|||| ||.|.+++.|+ +
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaV-GDg~N-D-l~m~~~AGlgiA~-----nAkp~Vk~~Ad----------------~ 301 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAI-GDGAN-D-LPMIKAAGLGIAY-----HAKPKVNEQAQ----------------V 301 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEE-ECCHH-H-HHHHHHCCCeEEe-----CCCHHHHhhCC----------------E
Confidence 4589999999999999999999997 99999 9 9999999999998 58999999999 7
Q ss_pred eccccChhHHHHHHH
Q 001705 1005 IEESYEPQDLSAALK 1019 (1024)
Q Consensus 1005 vt~~~~~dgI~~aL~ 1019 (1024)
++...+-+||..-|-
T Consensus 302 ~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 302 TIRHADLMGVLCILS 316 (322)
T ss_pred EecCcCHHHHHHHhc
Confidence 878889999887663
No 149
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.80 E-value=3.8e-07 Score=93.57 Aligned_cols=180 Identities=16% Similarity=0.149 Sum_probs=113.8
Q ss_pred EEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCC
Q 001705 171 YIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSC 250 (1024)
Q Consensus 171 kIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~ 250 (1024)
||++|...|. |+.-||.++.|-+|+..|+++| ++|+|+|+....+.. + .+..
T Consensus 3 kIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~--------~--------~~y~ 54 (185)
T PF09314_consen 3 KIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK--------E--------FEYN 54 (185)
T ss_pred eEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC--------C--------cccC
Confidence 7999998876 5778999999999999999999 999999997432211 1 3346
Q ss_pred CeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh-HHHHHHHHcc--CC
Q 001705 251 GAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGA--LN 327 (1024)
Q Consensus 251 gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~--~~ 327 (1024)
|++++.+|.... .. . ..+.. ....+..++.-... +..+.||||++.... +.+..+++.. .|
T Consensus 55 gv~l~~i~~~~~-g~--~-------~si~y----d~~sl~~al~~~~~--~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g 118 (185)
T PF09314_consen 55 GVRLVYIPAPKN-GS--A-------ESIIY----DFLSLLHALRFIKQ--DKIKYDIILILGYGIGPFFLPFLRKLRKKG 118 (185)
T ss_pred CeEEEEeCCCCC-Cc--h-------HHHHH----HHHHHHHHHHHHhh--ccccCCEEEEEcCCccHHHHHHHHhhhhcC
Confidence 999999985432 10 1 11111 11111222210000 113578999998763 4444444433 47
Q ss_pred CCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 328 VPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
.|++++.|++.+.. ..+.......++ ..|+.+.+.||.+|+-|+.-.+++...|..
T Consensus 119 ~~v~vN~DGlEWkR-------~KW~~~~k~~lk-----~~E~~avk~ad~lIaDs~~I~~y~~~~y~~------------ 174 (185)
T PF09314_consen 119 GKVVVNMDGLEWKR-------AKWGRPAKKYLK-----FSEKLAVKYADRLIADSKGIQDYIKERYGR------------ 174 (185)
T ss_pred CcEEECCCcchhhh-------hhcCHHHHHHHH-----HHHHHHHHhCCEEEEcCHHHHHHHHHHcCC------------
Confidence 79999999885432 112211111121 137788999999999998777766555541
Q ss_pred hhcCccccCCCCCcEEEeCCCCC
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMD 430 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD 430 (1024)
.+..+||.|.|
T Consensus 175 ------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 ------------KKSTFIAYGAD 185 (185)
T ss_pred ------------CCcEEecCCCC
Confidence 27899999976
No 150
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.80 E-value=6.6e-06 Score=92.95 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=162.0
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||++.+--...-.....-.+..++|++.-- |+++..-...|.....+ .+.+++..|.|++.|
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvN--------------aRLS~rS~~~y~k~~~~--~~~~~~~i~li~aQs 185 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVN--------------ARLSDRSFARYAKLKFL--ARLLFKNIDLILAQS 185 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEe--------------eeechhhhHHHHHHHHH--HHHHHHhcceeeecC
Confidence 47997775432222222233455689987643 33333223344444444 566789999999999
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
+.+.+++..+--. ++.+.-| +-+ ..... ...+
T Consensus 186 e~D~~Rf~~LGa~-------------------------~v~v~GN-lKf--d~~~~--------------------~~~~ 217 (419)
T COG1519 186 EEDAQRFRSLGAK-------------------------PVVVTGN-LKF--DIEPP--------------------PQLA 217 (419)
T ss_pred HHHHHHHHhcCCc-------------------------ceEEecc-eee--cCCCC--------------------hhhH
Confidence 9888875443211 3444333 111 10000 0011
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHc
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~ 542 (1024)
...+..+... .+.++++++.+. ...--+.+++++..++ ...|++.+|+-.+. .+-...+.++++..
T Consensus 218 ~~~~~~r~~l-~~~r~v~iaaST--H~GEeei~l~~~~~l~--~~~~~~llIlVPRH---------pERf~~v~~l~~~~ 283 (419)
T COG1519 218 AELAALRRQL-GGHRPVWVAAST--HEGEEEIILDAHQALK--KQFPNLLLILVPRH---------PERFKAVENLLKRK 283 (419)
T ss_pred HHHHHHHHhc-CCCCceEEEecC--CCchHHHHHHHHHHHH--hhCCCceEEEecCC---------hhhHHHHHHHHHHc
Confidence 1111222222 233888998888 2233355889999985 56677776554432 34567788888888
Q ss_pred CCCCCEEe-CC---CCC--------CCCHHHHHHHhhcCCcEEEe-cCCCCCCCHHHHHHHHcCCcEEEcCC----CCch
Q 001705 543 DLYGQVAY-PK---HHK--------QSDVPDIYRLAAKTKGVFIN-PALVEPFGLTIIEAAAYGLPVVATKN----GGPV 605 (1024)
Q Consensus 543 ~l~~~V~~-~g---~~~--------~~el~~ly~~A~~~~dv~v~-ps~~Egfgl~llEAmA~G~PVVat~~----Gg~~ 605 (1024)
|+.- ..+ -+ ..+ --|+..+|..| |++++ -|+.+--|--++|++++|+|||.-.. ..+.
T Consensus 284 gl~~-~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~ 358 (419)
T COG1519 284 GLSV-TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIA 358 (419)
T ss_pred CCeE-EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHH
Confidence 8741 111 11 111 12789999999 77655 47776567889999999999998652 2233
Q ss_pred hhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 001705 606 DILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIH 651 (1024)
Q Consensus 606 eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~ 651 (1024)
+-+...+.|+.|+ |.+.+++++..++++++.++++++++...+.
T Consensus 359 ~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 359 ERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3334445688887 6899999999999999999999999998873
No 151
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.78 E-value=3e-06 Score=98.96 Aligned_cols=111 Identities=21% Similarity=0.198 Sum_probs=75.2
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhccCCcEEEeCC
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV----DILKALNNGLLVDP 619 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~----eii~~~~~Gllv~p 619 (1024)
+.++|.+.+++++ .+++..| |++|..+ | ..++.||+++|+|+|.....+-. +.+.....|..++.
T Consensus 273 ~~~~v~~~~~~p~---~~ll~~~----~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~ 341 (392)
T TIGR01426 273 LPPNVEVRQWVPQ---LEILKKA----DAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPP 341 (392)
T ss_pred CCCCeEEeCCCCH---HHHHhhC----CEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecc
Confidence 3467888888865 3778888 8988653 3 24789999999999997654433 23444567877764
Q ss_pred C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 001705 620 H--DQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSH 665 (1024)
Q Consensus 620 ~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~ 665 (1024)
. +.++++++|.+++.+++.++.+.+-+.+....-.-+..++...+.
T Consensus 342 ~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 342 EEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 3 578999999999999876555543333322344555555444443
No 152
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.74 E-value=3.4e-06 Score=98.41 Aligned_cols=151 Identities=18% Similarity=0.279 Sum_probs=96.5
Q ss_pred CCCCCHHHHHHHHhhccccCCCCcEEEEE--ecCCCcccccccchHHHHHHHHHHHHcCCCC--------------CEEe
Q 001705 487 DPKKNVTTLLKAFGECQPLRELANMTLIL--GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG--------------QVAY 550 (1024)
Q Consensus 487 d~~Kgi~~ll~A~~~l~~l~~~~~l~LIv--G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~--------------~V~~ 550 (1024)
...++++.+++++..+.+ . +++.+++ .+..+ ...+.+.+...++.. .+.+
T Consensus 218 e~~~~lp~~l~al~~L~~--~-~~~~~v~~~~~~~~-----------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v 283 (396)
T TIGR03492 218 EAYRNLKLLLRALEALPD--S-QPFVFLAAIVPSLS-----------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEV 283 (396)
T ss_pred HHHccHHHHHHHHHHHhh--C-CCeEEEEEeCCCCC-----------HHHHHHHHHhcCceecCCccccchhhccCceEE
Confidence 345788899999999842 2 5555533 22222 233444444444431 2344
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch---hhhcc----CCcEEEeCCCCHH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV---DILKA----LNNGLLVDPHDQN 623 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~---eii~~----~~~Gllv~p~d~~ 623 (1024)
..+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+.. .+... ...++.+...+++
T Consensus 284 ~~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~ 352 (396)
T TIGR03492 284 LLG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPE 352 (396)
T ss_pred Eec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHH
Confidence 333 45789999999 9999874 56669999999999998744431 22222 1245555566889
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHH
Q 001705 624 AIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNY 662 (1024)
Q Consensus 624 ~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~ 662 (1024)
.+++++.++++|++.++++.+++++.. .....+.+++..
T Consensus 353 ~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 353 QAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 999999999999988888775555444 344445444433
No 153
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.69 E-value=5e-06 Score=96.00 Aligned_cols=241 Identities=19% Similarity=0.163 Sum_probs=139.7
Q ss_pred CcceEEEEcC-CChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeC
Q 001705 303 TWPYVIHGHY-ADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTS 381 (1024)
Q Consensus 303 ~~pDvIh~h~-~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~ 381 (1024)
.+||+|.+|. ....+.+++.+..+++|+++.--++ +. .|. + -+..|++ +-+-|++.+++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~-rs-------~~~----~---eE~~r~~-----i~~la~l~f~~ 151 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGE-VT-------EGA----I---DESIRHA-----ITKLSHLHFVA 151 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCc-cC-------CCC----c---hHHHHHH-----HHHHHhhccCC
Confidence 5899999987 5667777888888899998533321 00 010 0 0111222 34466788889
Q ss_pred CHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCC-CCCCCCccccCCCCCCccccccccCccccccCC
Q 001705 382 TRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPP-GMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRN 460 (1024)
Q Consensus 382 S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPn-GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (1024)
|+...+.+.+. |....++.++-| ++|.-......
T Consensus 152 t~~~~~~L~~e-----------------------g~~~~~i~~tG~~~iD~l~~~~~~---------------------- 186 (365)
T TIGR03568 152 TEEYRQRVIQM-----------------------GEDPDRVFNVGSPGLDNILSLDLL---------------------- 186 (365)
T ss_pred CHHHHHHHHHc-----------------------CCCCCcEEEECCcHHHHHHhhhcc----------------------
Confidence 98777765321 111226666544 55532111100
Q ss_pred CCcchHHHhhhhCCCCCcEEEEEeCC------CCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHH
Q 001705 461 LPPMWSEVMRFFTNPHKPTILALSRP------DPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTT 534 (1024)
Q Consensus 461 ~p~~~~~~~~~~~~~~~~~Il~vgRl------d~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~ 534 (1024)
.......++..++++++++..-.. +..+.+..+++++.++ . .++.++.-+.+. ....+...
T Consensus 187 --~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~--~~~~vi~P~~~p------~~~~i~~~ 253 (365)
T TIGR03568 187 --SKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---N--KNYIFTYPNADA------GSRIINEA 253 (365)
T ss_pred --CHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---c--cCCEEEEeCCCC------CchHHHHH
Confidence 011222333333344555444332 2223455666666554 2 133344322211 11223334
Q ss_pred HHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcE
Q 001705 535 VLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 535 i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~G 614 (1024)
+...... .++|.+++.++..++..+++.| +++|--| -|. +.||.++|+|+|+ .|.-+|.+..+.|.
T Consensus 254 i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitdS----Sgg-i~EA~~lg~Pvv~--l~~R~e~~~~g~nv 319 (365)
T TIGR03568 254 IEEYVNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGNS----SSG-IIEAPSFGVPTIN--IGTRQKGRLRADSV 319 (365)
T ss_pred HHHHhcC---CCCEEEECCCChHHHHHHHHhC----CEEEEcC----hhH-HHhhhhcCCCEEe--ecCCchhhhhcCeE
Confidence 4444221 4679999999999999999999 7887432 133 3899999999995 45677888778888
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHH
Q 001705 615 LLVDPHDQNAIADALLKLLADKN 637 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d~~ 637 (1024)
++| +.|+++|.+++.++ .++.
T Consensus 320 l~v-g~~~~~I~~a~~~~-~~~~ 340 (365)
T TIGR03568 320 IDV-DPDKEEIVKAIEKL-LDPA 340 (365)
T ss_pred EEe-CCCHHHHHHHHHHH-hChH
Confidence 888 56899999999995 4443
No 154
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.60 E-value=5.9e-06 Score=93.46 Aligned_cols=118 Identities=19% Similarity=0.318 Sum_probs=79.3
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
+.+.+++++|..+.. .+++++..+. ...+. ++|.... + .-.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~-~--------------------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA-D--------------------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc-c--------------------ccCCCEEEeecC
Confidence 346688999998776 6677777762 12333 4465420 0 014678877762
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCCH-HHHHHHHcCCcEEEcCCCCchh------hhccCCcEEEeCCC--CHHHH
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPALVEPFGL-TIIEAAAYGLPVVATKNGGPVD------ILKALNNGLLVDPH--DQNAI 625 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~~Egfgl-~llEAmA~G~PVVat~~Gg~~e------ii~~~~~Gllv~p~--d~~~l 625 (1024)
..++.+++..| |++|.-+ |. ++.|++++|+|+|.-...+..| .++..+.|..+++. +++.+
T Consensus 241 -~~~~~~~m~~a----d~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 37899999999 8998653 44 5999999999999987654322 33445567776543 57888
Q ss_pred HHHHHHH
Q 001705 626 ADALLKL 632 (1024)
Q Consensus 626 a~aI~~l 632 (1024)
+++|.++
T Consensus 311 ~~~l~~~ 317 (318)
T PF13528_consen 311 AEFLERL 317 (318)
T ss_pred HHHHhcC
Confidence 8888754
No 155
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.56 E-value=1.2e-05 Score=91.19 Aligned_cols=112 Identities=17% Similarity=0.259 Sum_probs=74.7
Q ss_pred CCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC
Q 001705 490 KNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT 569 (1024)
Q Consensus 490 Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~ 569 (1024)
.+...+++++..+ +.+.+++|+.+.. . + .+.+++.+.++.+ +++.++|..|
T Consensus 198 ~~~~~l~~~l~~~------~~~~~i~~~~~~~-~----------------~--~~~~~v~~~~~~~-~~~~~~l~~a--- 248 (321)
T TIGR00661 198 EYRYKILELLGKI------ANVKFVCYSYEVA-K----------------N--SYNENVEIRRITT-DNFKELIKNA--- 248 (321)
T ss_pred CCHHHHHHHHHhC------CCeEEEEeCCCCC-c----------------c--ccCCCEEEEECCh-HHHHHHHHhC---
Confidence 3456777777665 3555666643210 0 1 2245788888754 6899999999
Q ss_pred CcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchh------hhccCCcEEEeCCCCHHHHHHHHHHHHhCH
Q 001705 570 KGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD------ILKALNNGLLVDPHDQNAIADALLKLLADK 636 (1024)
Q Consensus 570 ~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~e------ii~~~~~Gllv~p~d~~~la~aI~~ll~d~ 636 (1024)
|++|.-+ | ..++.|++++|+|+|.....+..| .+.+.+.|+.++..+. ++.+++...++++
T Consensus 249 -d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 -ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred -CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 8999765 2 257999999999999988755323 3445567888887666 5555555555543
No 156
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.55 E-value=1.3e-07 Score=95.54 Aligned_cols=70 Identities=4% Similarity=0.114 Sum_probs=59.0
Q ss_pred EEEEecCCCCCCCc-----------hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHH---HHHHh-----cCCCC
Q 001705 751 VIAADCYDSDGNTT-----------ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETM---EAIRR-----CTVNI 811 (1024)
Q Consensus 751 lIa~DlDGTl~~~~-----------~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~---~~l~~-----~~i~~ 811 (1024)
+|++|+||||++++ ..+++.+.+++++++++ |+.|+++|||++..+. +++.. .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 35699999988876 68899999999999998 9999999999999874 78877 2342
Q ss_pred CCCCEEEecCCceEEc
Q 001705 812 EDFDAIVCNSGSELYF 827 (1024)
Q Consensus 812 ~~~d~lI~~nGa~I~~ 827 (1024)
.+++|++||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 35899999998864
No 157
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.50 E-value=2.1e-06 Score=84.59 Aligned_cols=128 Identities=19% Similarity=0.281 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCcchHH
Q 001705 198 VKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWPYIHE 277 (1024)
Q Consensus 198 ~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp~~~~ 277 (1024)
..++.++++.|.+.| |+|+++|.....+ .. ....|+.+++++.+.+ . .++++.
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~--------~~---------~~~~~i~~~~~~~~~k------~-~~~~~~- 62 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYE--------KY---------EIIEGIKVIRLPSPRK------S-PLNYIK- 62 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCch--------hh---------hHhCCeEEEEecCCCC------c-cHHHHH-
Confidence 347889999999999 9999999853211 00 1235899999874311 1 223221
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCh-HHHHHHHHccCC-CCEEEEeCCCchhhhHHHHhcCCCCcch
Q 001705 278 FVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGALN-VPMVLTGHSLGRNKFEQLLKQGRLPKDI 355 (1024)
Q Consensus 278 f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~~~-ipiV~t~H~l~~~~~~~l~~~g~~~~~i 355 (1024)
+ ..+.+.+.+ .+||+||+|.... +.++.++++..+ +|+|++.|+++... .+.
T Consensus 63 ----~----~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~------~~~----- 116 (139)
T PF13477_consen 63 ----Y----FRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN------SSK----- 116 (139)
T ss_pred ----H----HHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec------CCc-----
Confidence 1 123333333 5799999999864 787888877787 99999999763211 100
Q ss_pred hhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 356 NASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 356 ~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
..++.+. .++.+++.||.|++.|
T Consensus 117 --~~~~~~~--~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 117 --KKKLKKF--IIKFAFKRADKIIVQS 139 (139)
T ss_pred --hHHHHHH--HHHHHHHhCCEEEEcC
Confidence 0112222 2567899999999875
No 158
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.48 E-value=3.2e-07 Score=89.10 Aligned_cols=128 Identities=14% Similarity=0.190 Sum_probs=89.8
Q ss_pred EEEecCCCCCCCch--------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCc
Q 001705 752 IAADCYDSDGNTTE--------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGS 823 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~--------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa 823 (1024)
++||+||||...+. .+.+.+.++|++++++ |+.++++|||....+..+++.+++. ..++.++++++.
T Consensus 2 ~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 76 (139)
T cd01427 2 VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGLD-DYFDPVITSNGA 76 (139)
T ss_pred eEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCCc-hhhhheeccchh
Confidence 56999999776654 6778899999999987 9999999999999999999997763 123344443333
Q ss_pred eEEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHh
Q 001705 824 ELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRM 903 (1024)
Q Consensus 824 ~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~ 903 (1024)
...... . . ...
T Consensus 77 ~~~~~~------~-----------------------~--------~~~-------------------------------- 87 (139)
T cd01427 77 AIYYPK------E-----------------------G--------LFL-------------------------------- 87 (139)
T ss_pred hhhccc------c-----------------------c--------ccc--------------------------------
Confidence 211100 0 0 000
Q ss_pred cCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC-ceEE
Q 001705 904 RGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH-KTLI 970 (1024)
Q Consensus 904 ~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag-~gVa 970 (1024)
. -+.+..+-.|....+.+++.++++++++++| ||+.+ | ++|++.+| .+++
T Consensus 88 -----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-gD~~~-d-~~~~~~~g~~~i~ 138 (139)
T cd01427 88 -----------G---GGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLN-D-IEMAKAAGGLGVA 138 (139)
T ss_pred -----------c---ccccccCCCCHHHHHHHHHHcCCChhhEEEe-CCCHH-H-HHHHHHcCCceee
Confidence 1 1222233457788888999999998999886 99999 9 99999854 4554
No 159
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.43 E-value=1.5e-06 Score=94.92 Aligned_cols=193 Identities=9% Similarity=0.065 Sum_probs=111.9
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECC---CCHHHHHHHHHhcCCCCCCCCEEEecCCceEEc
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTG---SSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTG---R~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~ 827 (1024)
.+++|+||||.+.++.++ .+.++|++++++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.+
T Consensus 3 ~~~~D~DGtl~~~~~~i~-~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 3 GYLIDLDGTMYKGKERIP-EAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred EEEEeCCCceEcCCeeCc-CHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 456999999888766665 789999999998 999999995 99999999999999974 567899999987655
Q ss_pred CCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCe
Q 001705 828 PWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFR 907 (1024)
Q Consensus 828 ~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~ 907 (1024)
-. ....+.. -+....+.+...+....-. .... . .--+..-.+.......+......++ .+
T Consensus 77 l~----~~~~~~~--v~~lg~~~l~~~l~~~g~~--------~~~~--~-~~~Vvvg~~~~~~y~~l~~a~~~l~-~g-- 136 (249)
T TIGR01457 77 MN----DLKLEKT--VYVIGEEGLKEAIKEAGYV--------EDKE--K-PDYVVVGLDRQIDYEKFATATLAIR-KG-- 136 (249)
T ss_pred HH----hcCCCCE--EEEEcChhHHHHHHHcCCE--------ecCC--C-CCEEEEeCCCCCCHHHHHHHHHHHH-CC--
Confidence 30 0000100 0111223344444322110 0000 0 0111111111111222222222222 12
Q ss_pred EEEEEecCCe-----------------------EEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhc
Q 001705 908 CNLVYTRAGS-----------------------RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLV 963 (1024)
Q Consensus 908 ~~v~~s~~~~-----------------------~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~ 963 (1024)
+.++.+++.. ..+....+=-+...++.+++++++++++++++ ||+. + | +.+=+
T Consensus 137 ~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~V-GD~~~~-D-i~~a~ 213 (249)
T TIGR01457 137 AHFIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMV-GDNYLT-D-IRAGI 213 (249)
T ss_pred CeEEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEE-CCCchh-h-HHHHH
Confidence 2233333210 01111122223567888999999999999996 9996 6 9 88888
Q ss_pred CCCc-eEEec
Q 001705 964 GLHK-TLILR 972 (1024)
Q Consensus 964 ~ag~-gVaMg 972 (1024)
.+|. ++.+.
T Consensus 214 ~~G~~~v~v~ 223 (249)
T TIGR01457 214 DAGIDTLLVH 223 (249)
T ss_pred HcCCcEEEEc
Confidence 8886 56665
No 160
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.32 E-value=7.6e-07 Score=86.38 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+|-.+...|++++++.++++.. +||+.| | +++|+.+|.+||+. +|+++++..|+
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~----dAh~~v~~~a~ 136 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVA----DAHPLLKQRAD 136 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCccccc----ccCHHHHHhhH
Confidence 4777888899999999999977 599999 9 99999999999999 99999999999
No 161
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.31 E-value=5.2e-05 Score=84.31 Aligned_cols=98 Identities=21% Similarity=0.323 Sum_probs=73.7
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001705 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 477 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~ 556 (1024)
+.+++++|..++.+....+++++..+ ....++.+|+|.+.. ...++.+.+... +++.+.++ .
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~----------~~~~l~~~~~~~---~~i~~~~~--~ 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNP----------NLDELKKFAKEY---PNIILFID--V 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCc----------CHHHHHHHHHhC---CCEEEEeC--H
Confidence 46899999999987667888888765 233466678887532 124455555543 47888887 4
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN 601 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~ 601 (1024)
++++++++.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6899999999 999974 57999999999999998754
No 162
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.23 E-value=0.00075 Score=81.24 Aligned_cols=165 Identities=15% Similarity=0.114 Sum_probs=102.4
Q ss_pred HHhhhhCCCC-CcEEEEEeCCCC-----CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHH
Q 001705 467 EVMRFFTNPH-KPTILALSRPDP-----KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 467 ~~~~~~~~~~-~~~Il~vgRld~-----~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
++.++..... .+++++.|.... .+-+..+++||+.+. .++ ++-.+.+.. .
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~v-iw~~~~~~~------------------~ 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNV-LWKYDGEVE------------------A 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeE-EEEECCCcC------------------c
Confidence 3444443333 467788888642 334577778887762 122 222221110 0
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHH--HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhccCCcE
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYR--LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNG 614 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~--~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii~~~~~G 614 (1024)
.++.++|.+.+++|+. ++++ .+ ++||. -|-..++.||+.+|+|+|+-...+ ....+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 2356789999999875 5553 35 78874 344678999999999999987543 22334445678
Q ss_pred EEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 615 LLVDPH--DQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 615 llv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
+.++.. +.+++.+||.+++++|.-++.+.+-+.... +..+-.+-+-.+.+.+.
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 888754 578999999999999876665555544444 34455555555555543
No 163
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.22 E-value=5.1e-06 Score=83.28 Aligned_cols=197 Identities=15% Similarity=0.192 Sum_probs=114.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWR 830 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~ 830 (1024)
++-+|.||||..+...++++..+.|+.+++ .+.+.++-|-.++-+.+-+..-=+ ..|||.-+.||-.-|.. |
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~-----~v~ig~VggsDl~k~~eqlG~~Vl--~~fDY~F~ENGl~~yk~-g 84 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKLRK-----KVTIGFVGGSDLSKQQEQLGDNVL--EEFDYVFSENGLVAYKG-G 84 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHHhh-----heEEEEeecHHHHHHHHHhchhHH--hhhcccccCCCeeEeeC-C
Confidence 334999999988888999999999999886 588999999888776666522112 46999999999988875 5
Q ss_pred ccccCcchhhhhcccCCchhHHHHHhhhhhcc-CCCCcccccccCCCCceEEEEEecCCCc------------hhhHHHH
Q 001705 831 DMVADGDYEAHVEYRWPGENVRSVVPRVARAE-DGAEDDIVGFVDASSSRCQSYSIKPGAE------------TRKVDNI 897 (1024)
Q Consensus 831 ~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~------------~~~~~el 897 (1024)
..........++......+-+.-.+..+.... +.+.+..++-.... ..++-.-++... ...-+.+
T Consensus 85 k~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgM--iNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~ 162 (252)
T KOG3189|consen 85 KLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGM--INVSPIGRNCSQEERNEFEELDKKHKIREKF 162 (252)
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCc--eeccccccccCHHHHHHHHHhhhhhhhHHHH
Confidence 45444444444432211122222222222211 11111111111111 111111111110 0011122
Q ss_pred HHHHHhcCCeEEEEEecC-CeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhc
Q 001705 898 RQRLRMRGFRCNLVYTRA-GSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLV 963 (1024)
Q Consensus 898 ~~~L~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~ 963 (1024)
.+.|+.......+++|-+ .-.+||.|.|-+|-.-|++|-.. |.+ ++..| || ++| | .+.|.
T Consensus 163 v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~--~IhFF-GDkT~~GGN-D-yEIf~ 227 (252)
T KOG3189|consen 163 VEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD--TIHFF-GDKTMPGGN-D-YEIFA 227 (252)
T ss_pred HHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc--eEEEe-ccccCCCCC-c-ceeee
Confidence 233444444455566654 34799999999999999998775 554 56666 99 789 9 78886
No 164
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.14 E-value=1e-05 Score=85.82 Aligned_cols=62 Identities=23% Similarity=0.291 Sum_probs=55.2
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 918 RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 918 ~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.+-.+-.+-+|..+|+.++..+|+++++++++ |||.| | ++||+.+|.+||.. +.+++++.|+
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~-gDs~n-D-lpml~~ag~~ia~n-----~~~~l~~~a~ 196 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVAY-GDSAN-D-LPMLEAAGLPIAVN-----PKPKLRALAD 196 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEEE-cCchh-h-HHHHHhCCCCeEeC-----cCHHHHHHHH
Confidence 34445555689999999999999999999996 99999 9 99999999999986 8999998888
No 165
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.13 E-value=0.00011 Score=84.26 Aligned_cols=261 Identities=20% Similarity=0.217 Sum_probs=137.6
Q ss_pred HHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCC-cchhhHHHHH
Q 001705 285 HIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLP-KDINASYKIM 362 (1024)
Q Consensus 285 ~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~-~~i~~~y~~~ 362 (1024)
.+..+.+.+.+ .+||+|.++.- ...+.+++.+..+++| |.++|.--+ .+... ..+. +..
T Consensus 55 ~~~~~~~~~~~-------~~Pd~Vlv~GD~~~~la~alaA~~~~ip-v~HieaGlR--------s~d~~~g~~d---e~~ 115 (346)
T PF02350_consen 55 AIIELADVLER-------EKPDAVLVLGDRNEALAAALAAFYLNIP-VAHIEAGLR--------SGDRTEGMPD---EIN 115 (346)
T ss_dssp HHHHHHHHHHH-------HT-SEEEEETTSHHHHHHHHHHHHTT-E-EEEES-------------S-TTSSTTH---HHH
T ss_pred HHHHHHHHHHh-------cCCCEEEEEcCCchHHHHHHHHHHhCCC-EEEecCCCC--------ccccCCCCch---hhh
Confidence 33444555544 47999998864 5667778888889999 445553100 00111 0111 122
Q ss_pred HHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCC-CCCCCCccccCCCC
Q 001705 363 RRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPP-GMDFSYVTTQDTMG 441 (1024)
Q Consensus 363 r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPn-GiD~~~f~~~~~~~ 441 (1024)
|. .+-+-|++.+++|+...+.+.+. |....+|.++-+ ++|.-......
T Consensus 116 R~-----~i~~la~lhf~~t~~~~~~L~~~-----------------------G~~~~rI~~vG~~~~D~l~~~~~~--- 164 (346)
T PF02350_consen 116 RH-----AIDKLAHLHFAPTEEARERLLQE-----------------------GEPPERIFVVGNPGIDALLQNKEE--- 164 (346)
T ss_dssp HH-----HHHHH-SEEEESSHHHHHHHHHT-----------------------T--GGGEEE---HHHHHHHHHHHT---
T ss_pred hh-----hhhhhhhhhccCCHHHHHHHHhc-----------------------CCCCCeEEEEChHHHHHHHHhHHH---
Confidence 22 24568999999999988876443 112237776654 33322111000
Q ss_pred CCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEeCCCC----CCCHHHHHHHHhhccccCCCCcEEEEEec
Q 001705 442 GDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDP----KKNVTTLLKAFGECQPLRELANMTLILGN 517 (1024)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~----~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~ 517 (1024)
..+. .. ...+.....++++|...-... ......+.+++..+.+. .++.+|+--
T Consensus 165 ------------------~~~~-~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~---~~~~vi~~~ 221 (346)
T PF02350_consen 165 ------------------IEEK-YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER---QNVPVIFPL 221 (346)
T ss_dssp ------------------TCC--HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH---TTEEEEEE-
T ss_pred ------------------Hhhh-hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc---CCCcEEEEe
Confidence 0000 00 011111245566665553322 23456777777777532 444443322
Q ss_pred CCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHH-HHHHcCCcE
Q 001705 518 RDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTII-EAAAYGLPV 596 (1024)
Q Consensus 518 ~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~ll-EAmA~G~PV 596 (1024)
. .++.....+.+.+.++ +++.+...++..++..+++.| +++|--| | .+. ||..+|+|+
T Consensus 222 h--------n~p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a----~~vvgdS-----s-GI~eEa~~lg~P~ 280 (346)
T PF02350_consen 222 H--------NNPRGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNA----DLVVGDS-----S-GIQEEAPSLGKPV 280 (346)
T ss_dssp ---------S-HHHHHHHHHHHTT----TTEEEE----HHHHHHHHHHE----SEEEESS-----H-HHHHHGGGGT--E
T ss_pred c--------CCchHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcc----eEEEEcC-----c-cHHHHHHHhCCeE
Confidence 1 1223445555555555 389999999999999999999 7776432 5 667 999999999
Q ss_pred EEcC-CCCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001705 597 VATK-NGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSE 641 (1024)
Q Consensus 597 Vat~-~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 641 (1024)
|.-+ .|--++.+..+.+-+ |. .|.+++.++|.+++.+++.+.+
T Consensus 281 v~iR~~geRqe~r~~~~nvl-v~-~~~~~I~~ai~~~l~~~~~~~~ 324 (346)
T PF02350_consen 281 VNIRDSGERQEGRERGSNVL-VG-TDPEAIIQAIEKALSDKDFYRK 324 (346)
T ss_dssp EECSSS-S-HHHHHTTSEEE-ET-SSHHHHHHHHHHHHH-HHHHHH
T ss_pred EEecCCCCCHHHHhhcceEE-eC-CCHHHHHHHHHHHHhChHHHHh
Confidence 9985 455566666555444 75 7999999999999988554443
No 166
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.12 E-value=0.00087 Score=75.56 Aligned_cols=363 Identities=16% Similarity=0.131 Sum_probs=207.9
Q ss_pred ceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCC
Q 001705 169 NLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTG 248 (1024)
Q Consensus 169 ~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~ 248 (1024)
+|||+.|..- | |+ ..-..-|.+++.+.+++.-..++|.+..+++....|-+..+.-
T Consensus 3 ~~Kv~~I~GT-----------R-PE----~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~-------- 58 (383)
T COG0381 3 MLKVLTIFGT-----------R-PE----AIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIR-------- 58 (383)
T ss_pred ceEEEEEEec-----------C-HH----HHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCC--------
Confidence 4789988833 2 12 2345578899999988788888888865544332221111100
Q ss_pred CCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-ChHHHHHHHHccCC
Q 001705 249 SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYA-DAGEVAAHLSGALN 327 (1024)
Q Consensus 249 ~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~-~~~~~a~~l~~~~~ 327 (1024)
.+. +.+..+. ... ...+-....+..+.+++.+ .+||+|.+|.- ...+++++.+...+
T Consensus 59 ~pd---y~L~i~~-----~~~-------tl~~~t~~~i~~~~~vl~~-------~kPD~VlVhGDT~t~lA~alaa~~~~ 116 (383)
T COG0381 59 KPD---YDLNIMK-----PGQ-------TLGEITGNIIEGLSKVLEE-------EKPDLVLVHGDTNTTLAGALAAFYLK 116 (383)
T ss_pred CCC---cchhccc-----cCC-------CHHHHHHHHHHHHHHHHHh-------hCCCEEEEeCCcchHHHHHHHHHHhC
Confidence 000 0000000 000 1122233334444555554 68999999965 45555577777789
Q ss_pred CCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHHHHHh
Q 001705 328 VPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 328 ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~l~~~ 407 (1024)
+|+.+---++ .+......-++-|+ .+-.-|++-+++|....+.+.+.
T Consensus 117 IpV~HvEAGl-------------Rt~~~~~PEE~NR~-----l~~~~S~~hfapte~ar~nLl~E--------------- 163 (383)
T COG0381 117 IPVGHVEAGL-------------RTGDLYFPEEINRR-----LTSHLSDLHFAPTEIARKNLLRE--------------- 163 (383)
T ss_pred CceEEEeccc-------------ccCCCCCcHHHHHH-----HHHHhhhhhcCChHHHHHHHHHc---------------
Confidence 9998765543 11111100011122 23457888899998887775331
Q ss_pred hhcCccccCCCCCcEEEeCCCC-CCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCCcEEEEEe-C
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGM-DFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALS-R 485 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGi-D~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vg-R 485 (1024)
|.+..+|.|+-|-+ |.-...... ....+. ....+...+++++|+..+ |
T Consensus 164 --------G~~~~~IfvtGnt~iDal~~~~~~-------------------~~~~~~---~~~~~~~~~~~~~iLvT~HR 213 (383)
T COG0381 164 --------GVPEKRIFVTGNTVIDALLNTRDR-------------------VLEDSK---ILAKGLDDKDKKYILVTAHR 213 (383)
T ss_pred --------CCCccceEEeCChHHHHHHHHHhh-------------------hccchh---hHHhhhccccCcEEEEEcch
Confidence 22233678877653 211111000 000000 011112334555666555 3
Q ss_pred CCC-CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHH
Q 001705 486 PDP-KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYR 564 (1024)
Q Consensus 486 ld~-~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~ 564 (1024)
-.- .+++..+++|+.++. ...+++.+|.-..+. ..+.++. ...++-.++|.++..+...+...+..
T Consensus 214 reN~~~~~~~i~~al~~i~--~~~~~~~viyp~H~~---------~~v~e~~--~~~L~~~~~v~li~pl~~~~f~~L~~ 280 (383)
T COG0381 214 RENVGEPLEEICEALREIA--EEYPDVIVIYPVHPR---------PRVRELV--LKRLKNVERVKLIDPLGYLDFHNLMK 280 (383)
T ss_pred hhcccccHHHHHHHHHHHH--HhCCCceEEEeCCCC---------hhhhHHH--HHHhCCCCcEEEeCCcchHHHHHHHH
Confidence 322 288999999999885 444777777765543 1122222 35666666799999999999999999
Q ss_pred HhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001705 565 LAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECR 643 (1024)
Q Consensus 565 ~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 643 (1024)
.| .++++- .|-..-||-..|+||+.-+. ..-+|-+.. +.-.+|. .|.+.+.+++.+++++++..++|+
T Consensus 281 ~a-----~~iltD----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lvg-~~~~~i~~~~~~ll~~~~~~~~m~ 349 (383)
T COG0381 281 NA-----FLILTD----SGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILVG-TDEENILDAATELLEDEEFYERMS 349 (383)
T ss_pred hc-----eEEEec----CCchhhhHHhcCCcEEeeccCCCCccceec-CceEEeC-ccHHHHHHHHHHHhhChHHHHHHh
Confidence 99 556552 26678899999999998763 333455543 3446664 488999999999999998877665
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 644 KNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 644 ~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
... ..|.=...++++.+.+..
T Consensus 350 ~~~----npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 350 NAK----NPYGDGNASERIVEILLN 370 (383)
T ss_pred ccc----CCCcCcchHHHHHHHHHH
Confidence 432 244444455555555543
No 167
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.08 E-value=8e-06 Score=88.73 Aligned_cols=71 Identities=15% Similarity=0.187 Sum_probs=59.2
Q ss_pred EEEEecCCCCCCCchhh---HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEc
Q 001705 751 VIAADCYDSDGNTTETF---QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i---~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~ 827 (1024)
+|+||+||||.++++.+ ++.+.++|++|+++ |+.++|+|+++...+...++.+|+. ..|+.+| ++|.....
T Consensus 128 vIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFdvII-s~Gdv~~~ 201 (301)
T TIGR01684 128 VVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFDIII-SGGHKAEE 201 (301)
T ss_pred EEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccCEEE-ECCccccC
Confidence 77799999988886665 59999999999998 9999999999999999999999996 3456554 46666554
No 168
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.06 E-value=0.00077 Score=76.28 Aligned_cols=66 Identities=29% Similarity=0.314 Sum_probs=49.9
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC---chhhhccCCcEEEeCCCCHHHHHHHHHHHHh
Q 001705 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG---PVDILKALNNGLLVDPHDQNAIADALLKLLA 634 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg---~~eii~~~~~Gllv~p~d~~~la~aI~~ll~ 634 (1024)
+...++..| |++|- +-|....||+..|+|.|++..|- .-+.+. +.|++....|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 556888888 88883 45788999999999999987653 223333 35889988899999987766544
No 169
>PLN02448 UDP-glycosyltransferase family protein
Probab=98.03 E-value=0.0045 Score=73.82 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=60.0
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVDP- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~p- 619 (1024)
+++.+.++.|+.+ ++..++ .++||. -+-..+++||+++|+|+|+-...+= ...+.+ ...|+-+..
T Consensus 323 ~~~~v~~w~pQ~~---iL~h~~--v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 323 DMGLVVPWCDQLK---VLCHSS--VGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred CCEEEeccCCHHH---HhccCc--cceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 3566778888765 444551 133552 2334688999999999999775442 222322 245776631
Q ss_pred ------CCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Q 001705 620 ------HDQNAIADALLKLLADK-NMWSECRKNGLK 648 (1024)
Q Consensus 620 ------~d~~~la~aI~~ll~d~-~~~~~~~~~~~~ 648 (1024)
-+.+++++++.+++.++ +..+++++++.+
T Consensus 394 ~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 394 VGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKE 429 (459)
T ss_pred cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 36799999999999874 445556555554
No 170
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.01 E-value=1.3e-05 Score=77.20 Aligned_cols=56 Identities=5% Similarity=0.003 Sum_probs=44.8
Q ss_pred EEEEecCCCCCCCch------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHH---------------HHHHHHHhcCC
Q 001705 751 VIAADCYDSDGNTTE------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG---------------ETMEAIRRCTV 809 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---------------~~~~~l~~~~i 809 (1024)
+|++|+||||++.+. .+.+.+++++++++++ |+.|+++|||+.. .+..||...++
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~i 78 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNV 78 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCC
Confidence 567999999776432 2557888889888877 9999999999876 45678888888
Q ss_pred C
Q 001705 810 N 810 (1024)
Q Consensus 810 ~ 810 (1024)
+
T Consensus 79 p 79 (126)
T TIGR01689 79 P 79 (126)
T ss_pred C
Confidence 6
No 171
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.01 E-value=0.0011 Score=74.08 Aligned_cols=125 Identities=15% Similarity=0.163 Sum_probs=103.7
Q ss_pred cCCCCCEEeCCCCCC-CCHHHHHHHhhcCCcEEEecCCC---CC---CCHHHHHHHHcCCcEEEcCCCCchhhhccCCcE
Q 001705 542 YDLYGQVAYPKHHKQ-SDVPDIYRLAAKTKGVFINPALV---EP---FGLTIIEAAAYGLPVVATKNGGPVDILKALNNG 614 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~-~el~~ly~~A~~~~dv~v~ps~~---Eg---fgl~llEAmA~G~PVVat~~Gg~~eii~~~~~G 614 (1024)
..+.+++.+.|+.+. ..++..|+.- +++++-+.. ++ +..-+.|+++||.|.+++..-+..-.+..+..-
T Consensus 233 ~~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~ 308 (373)
T COG4641 233 RTWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDI 308 (373)
T ss_pred ccccchhhhhhccCccchhhhccccc----ceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchhe
Confidence 346678888888887 7888888888 888876442 22 378899999999999999888887777766654
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHhhhc
Q 001705 615 LLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 615 llv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
++. .|..++.+.+..++..++.++++.+.+.+.+ ..|+.++-+.++++.+.++..+
T Consensus 309 iv~--~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 309 IVY--QDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASINIR 365 (373)
T ss_pred EEe--cCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 444 4999999999999999999999999999998 5899999999999999886654
No 172
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=97.97 E-value=1.2e-05 Score=83.58 Aligned_cols=183 Identities=13% Similarity=0.176 Sum_probs=96.4
Q ss_pred HHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHH-hcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhcccCCchh
Q 001705 772 KNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIR-RCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGEN 850 (1024)
Q Consensus 772 ~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~-~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~ 850 (1024)
.++|++|++ .+.++++||-.+.-+.+-+. ..-+ ..+|++-+.||...|.. +.......+..++...-..+.
T Consensus 2 ~~~L~~L~~-----~~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~-~~~~~~~~~~~~lgee~~~~~ 73 (220)
T PF03332_consen 2 AELLQKLRK-----KVPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKN-GELIWSQSIAEFLGEEKLQKL 73 (220)
T ss_dssp HHHHHHHHT-----TSEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEET-TEEEEE--HHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----cCeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEEC-CCchhhHhHHHHcCHHHHHHH
Confidence 467788875 68999999999998887774 2112 35899999999999875 322222223333322111111
Q ss_pred HHHHHhhhhhcc-CCCCcccccccCCCCceEEEEE--ecCCCchh------------hHHHHHHHHHhcCCeEEEEE-ec
Q 001705 851 VRSVVPRVARAE-DGAEDDIVGFVDASSSRCQSYS--IKPGAETR------------KVDNIRQRLRMRGFRCNLVY-TR 914 (1024)
Q Consensus 851 v~~~l~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~------------~~~el~~~L~~~~~~~~v~~-s~ 914 (1024)
+...+..+.... +...+..++.... .+.+. -++..... .-+.+.+.|+.....+.+.+ .+
T Consensus 74 in~~l~~~~~l~lp~krGtfIE~R~g----mIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siG 149 (220)
T PF03332_consen 74 INFCLRYISDLDLPVKRGTFIEFRGG----MINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIG 149 (220)
T ss_dssp HHHHHHHHHT---S---S-SEEEESS----EEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEE
T ss_pred HHHHHHHHHhCCCCccCCCceeecCC----cEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecC
Confidence 122222221110 0101112222111 12221 11111000 11234455555544443433 34
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCC----CCCCChHHhhcCC-CceEEec
Q 001705 915 AGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGE----KGDTDYEDLLVGL-HKTLILR 972 (1024)
Q Consensus 915 ~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGD----s~N~D~~~Ml~~a-g~gVaMg 972 (1024)
+.+.+||.|+|.+|..+|++|.+.. .++++.| || ++| | .+.+... -.|+.|.
T Consensus 150 GqiSiDvfp~GwDKty~Lr~l~~~~---~~~I~Ff-GDkt~pGGN-D-yei~~~~rt~g~~V~ 206 (220)
T PF03332_consen 150 GQISIDVFPKGWDKTYCLRHLEDEG---FDEIHFF-GDKTFPGGN-D-YEIFEDPRTIGHTVT 206 (220)
T ss_dssp TTTEEEEEETT-SGGGGGGGTTTTT----SEEEEE-ESS-STTST-T-HHHHHSTTSEEEE-S
T ss_pred CceEEccccCCccHHHHHHHHHhcc---cceEEEE-ehhccCCCC-C-ceeeecCCccEEEeC
Confidence 4469999999999999999997743 5677776 99 789 9 8888765 3588877
No 173
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.00011 Score=81.98 Aligned_cols=108 Identities=19% Similarity=0.305 Sum_probs=74.9
Q ss_pred CHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhccC-CcEEEe-C-----C-CCHHHH
Q 001705 558 DVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV----DILKAL-NNGLLV-D-----P-HDQNAI 625 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~----eii~~~-~~Gllv-~-----p-~d~~~l 625 (1024)
|..++.+-| .+.|+||.+||+|.+..|.-.+|+|-|.|+..|.. |.|++. .-|+.+ | | .+.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 677888888 89999999999999999999999999999977753 444332 246654 2 2 246677
Q ss_pred HHHHHHHHhCHHHHHHHHHHH-HHHH-hcCCHHHHHHHHHHHHHHhh
Q 001705 626 ADALLKLLADKNMWSECRKNG-LKNI-HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 626 a~aI~~ll~d~~~~~~~~~~~-~~~~-~~fsw~~~a~~~l~~~~~~~ 670 (1024)
++-|....... .++++-++. -+.. ...+|.....-|.+.=.-.+
T Consensus 569 ~~~m~~F~~qs-RRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 569 ASFMYEFCKQS-RRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHHHH-HHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 77776665433 344443333 3334 47899998888776544333
No 174
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.87 E-value=0.00011 Score=85.77 Aligned_cols=185 Identities=15% Similarity=0.129 Sum_probs=118.8
Q ss_pred hHHHhhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCC
Q 001705 465 WSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDL 544 (1024)
Q Consensus 465 ~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l 544 (1024)
...+..+..+.+..+++++.++ .|=-+..++++.++ ++..|+-+|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~I--L~~vP~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARI--LKAVPNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHH--HHHSTTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHH--HHhCCCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 3445667777777666666665 66678888999888 46667777755433321 12567788888888
Q ss_pred C-CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCch-----hhhcc-CCcEEEe
Q 001705 545 Y-GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPV-----DILKA-LNNGLLV 617 (1024)
Q Consensus 545 ~-~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~-----eii~~-~~~Gllv 617 (1024)
. +++.|.+..+.++....|+.+ ||++=|..+-| +.+.+||+.+|+|||.-.-.... -++.. |-..++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 578998888888888888888 99997754433 79999999999999986422111 12211 1122334
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHh
Q 001705 618 DPHDQNAIADALLKLLADKNMWSECRKNGLKNI-H--RFSWPEHCRNYLSHVEHS 669 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~ 669 (1024)
. |.++..+.-.++.+|++.+++++++.++.. + -|+-..+++.+.+.|+.+
T Consensus 415 ~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3 899999999999999999999999998876 3 799999999999999764
No 175
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.87 E-value=9.8e-05 Score=82.14 Aligned_cols=66 Identities=12% Similarity=0.009 Sum_probs=48.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEecCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSS---LGETMEAIRRCTVNIEDFDAIVCNSG 822 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~---~~~~~~~l~~~~i~~~~~d~lI~~nG 822 (1024)
++++|+||||.+.+..+ +.+.++|++|+++ |+.|+++|+|+ .......++.+|++. ..+-+++++-
T Consensus 4 ~~~~D~DGtl~~~~~~~-~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts~~ 72 (279)
T TIGR01452 4 GFIFDCDGVLWLGERVV-PGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSSAL 72 (279)
T ss_pred EEEEeCCCceEcCCeeC-cCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecHHH
Confidence 56699999987765444 4589999999987 99999999976 445556678888863 3444555433
No 176
>PRK10444 UMP phosphatase; Provisional
Probab=97.83 E-value=0.00025 Score=77.32 Aligned_cols=65 Identities=6% Similarity=-0.013 Sum_probs=50.1
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHH---HHHhcCCCCCCCCEEEecC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETME---AIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~---~l~~~~i~~~~~d~lI~~n 821 (1024)
++++|+||||.+.+ .+.+.+.+++++|+++ |+.|+++|+|+...... .|..+|++. ..+-++++.
T Consensus 3 ~v~~DlDGtL~~~~-~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts~ 70 (248)
T PRK10444 3 NVICDIDGVLMHDN-VAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTSA 70 (248)
T ss_pred EEEEeCCCceEeCC-eeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecHH
Confidence 45699999988775 6778899999999998 99999999998865544 455567763 355566653
No 177
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.78 E-value=6.1e-05 Score=82.09 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=58.9
Q ss_pred EEEEecCCCCCCCchhh---HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEc
Q 001705 751 VIAADCYDSDGNTTETF---QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYF 827 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i---~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~ 827 (1024)
+|++|+||||.++++.+ ++.+.++|++|+++ |+.++|+|+.+...+...++.+++. ..|+.+|| +|.....
T Consensus 130 ~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDvII~-~g~i~~k 203 (303)
T PHA03398 130 VIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDIIIC-GGRKAGE 203 (303)
T ss_pred EEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccEEEE-CCCcccc
Confidence 56699999999887776 69999999999998 9999999988888889999999995 34565544 6665554
Q ss_pred C
Q 001705 828 P 828 (1024)
Q Consensus 828 ~ 828 (1024)
.
T Consensus 204 ~ 204 (303)
T PHA03398 204 Y 204 (303)
T ss_pred c
Confidence 3
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.75 E-value=8e-05 Score=81.75 Aligned_cols=66 Identities=14% Similarity=0.083 Sum_probs=51.6
Q ss_pred EEEEecCCCCCCCch---hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEecC
Q 001705 751 VIAADCYDSDGNTTE---TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~---~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---~~~~~l~~~~i~~~~~d~lI~~n 821 (1024)
++++|+||||.+.+. .+.+.+.++|++|+++ |+.|+++|||+.. .+...+..+|++. .++-++++.
T Consensus 3 ~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts~ 74 (257)
T TIGR01458 3 GVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTPA 74 (257)
T ss_pred EEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcHH
Confidence 456999999777654 2778999999999998 9999999997655 5777888888863 455566643
No 179
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.75 E-value=0.0013 Score=76.96 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=71.2
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhccCCcEEEe
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKALNNGLLV 617 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~~~~Gllv 617 (1024)
-++..++....++++. +++..| |++|.. |-..+..||+.+|+|+|+-..+.= .+-++....|..+
T Consensus 280 ~~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 280 VNVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred ccCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 3567788888887765 588899 899965 334678899999999999776542 3345556678777
Q ss_pred C--CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 001705 618 D--PHDQNAIADALLKLLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 618 ~--p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~ 650 (1024)
. +.+.+.++++|.++|+|+..++... ...+..
T Consensus 349 ~~~~l~~~~l~~av~~vL~~~~~~~~~~-~~~~~~ 382 (406)
T COG1819 349 PFEELTEERLRAAVNEVLADDSYRRAAE-RLAEEF 382 (406)
T ss_pred CcccCCHHHHHHHHHHHhcCHHHHHHHH-HHHHHh
Confidence 6 6789999999999999987554443 333444
No 180
>PLN02208 glycosyltransferase family protein
Probab=97.67 E-value=0.17 Score=60.10 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=61.4
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hccCCcEEEeCC--
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDI-LKALNNGLLVDP-- 619 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~ei-i~~~~~Gllv~p-- 619 (1024)
.+.+.++.||.+ +++.. ..++||. . +--++++||+++|+|+|+-..-+ ...+ +...+.|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~--~v~~Fvt--H--cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP--SIGCFVN--H--CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC--ccCeEEc--c--CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 466678888875 55555 1134552 1 22378999999999999976433 2222 233466877754
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001705 620 ---HDQNAIADALLKLLADK-NMWSECRKNGLKN 649 (1024)
Q Consensus 620 ---~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 649 (1024)
-+.++++++|.+++.++ +..+++++++++.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 36789999999999865 4556666666554
No 181
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.63 E-value=0.24 Score=59.56 Aligned_cols=140 Identities=13% Similarity=0.147 Sum_probs=76.4
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+..+.+++|.... .+.+..++++++.+. .++..+++........... +-..+.+.+. ..++...++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~~~---lp~~~~~r~~----~~g~~v~~w 352 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKEEW---LPEGFEERTK----GKGLIIRGW 352 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchhhc---CCHHHHHHhc----cCCEEEecC
Confidence 4567888887643 345666666666552 2454566642111000000 0011111111 246778889
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhh----h-ccCCcEEEe--------C--
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDI----L-KALNNGLLV--------D-- 618 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~ei----i-~~~~~Gllv--------~-- 618 (1024)
+|+. +++..++ .++||.- -| -.+++||+++|+|+|+-...+=... + +...-|+-+ +
T Consensus 353 ~PQ~---~iL~h~~--v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~ 423 (482)
T PLN03007 353 APQV---LILDHQA--TGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGD 423 (482)
T ss_pred CCHH---HHhccCc--cceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccC
Confidence 8875 5666661 1335522 23 3688999999999999764332211 1 111334433 1
Q ss_pred CCCHHHHHHHHHHHHhCH
Q 001705 619 PHDQNAIADALLKLLADK 636 (1024)
Q Consensus 619 p~d~~~la~aI~~ll~d~ 636 (1024)
.-+.++++++|++++.++
T Consensus 424 ~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 424 FISREKVEKAVREVIVGE 441 (482)
T ss_pred cccHHHHHHHHHHHhcCc
Confidence 136889999999999875
No 182
>PLN02670 transferase, transferring glycosyl groups
Probab=97.63 E-value=0.092 Score=62.63 Aligned_cols=184 Identities=13% Similarity=0.117 Sum_probs=99.8
Q ss_pred HHHhhhhCC--CCCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHH
Q 001705 466 SEVMRFFTN--PHKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDK 541 (1024)
Q Consensus 466 ~~~~~~~~~--~~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~ 541 (1024)
....+++.. ++..+.+++|... +..-+..+..+++.+. . .+.-++....... .......-....+.++.
T Consensus 266 ~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~----~-~FlWv~r~~~~~~--~~~~~~lp~~f~~~~~~ 338 (472)
T PLN02670 266 VRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSE----T-PFFWVLRNEPGTT--QNALEMLPDGFEERVKG 338 (472)
T ss_pred HHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc--cchhhcCChHHHHhccC
Confidence 344455432 3456777788764 2345666777777663 1 3323443211100 00000000111111111
Q ss_pred cCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhccCCcEEEe
Q 001705 542 YDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNGLLV 617 (1024)
Q Consensus 542 ~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii~~~~~Gllv 617 (1024)
. -+.+.++.||.+ ++...+ .++||.- +--.+++||+++|+|+|+-...+ ....+...+.|+.+
T Consensus 339 ---r-G~vv~~W~PQ~~---IL~H~~--v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l 405 (472)
T PLN02670 339 ---R-GMIHVGWVPQVK---ILSHES--VGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEV 405 (472)
T ss_pred ---C-CeEEeCcCCHHH---HhcCcc--cceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEe
Confidence 1 256678888775 454441 1345522 33478999999999999976433 22334445778888
Q ss_pred CC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhh
Q 001705 618 DP------HDQNAIADALLKLLADKNMWSECRKNGLKNI----HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 618 ~p------~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~----~~fsw~~~a~~~l~~~~~~~ 670 (1024)
+. -+.++++++|.+++.+++ -.++++++++.. .+=.-.+.++.+.+.+.+..
T Consensus 406 ~~~~~~~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 406 PRDERDGSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred eccccCCcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 53 358999999999998752 234455555443 34555666666666666543
No 183
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.40 E-value=0.00053 Score=87.86 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEecc
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEE 1007 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~ 1007 (1024)
|..+++.+.. ..++++++ ||+.| | .+||+.+|.||+|| |+++..+++|| .+..
T Consensus 701 K~~~i~~l~~----~~~~v~~v-GDg~n-D-~~al~~Agvgia~g----~g~~~a~~~ad----------------~vl~ 753 (834)
T PRK10671 701 KAEAIKRLQS----QGRQVAMV-GDGIN-D-APALAQADVGIAMG----GGSDVAIETAA----------------ITLM 753 (834)
T ss_pred HHHHHHHHhh----cCCEEEEE-eCCHH-H-HHHHHhCCeeEEec----CCCHHHHHhCC----------------EEEe
Confidence 4445555433 24567775 99999 9 99999999999999 99999999999 7777
Q ss_pred ccChhHHHHHHH
Q 001705 1008 SYEPQDLSAALK 1019 (1024)
Q Consensus 1008 ~~~~dgI~~aL~ 1019 (1024)
..+.++|..+++
T Consensus 754 ~~~~~~i~~~i~ 765 (834)
T PRK10671 754 RHSLMGVADALA 765 (834)
T ss_pred cCCHHHHHHHHH
Confidence 888999999986
No 184
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.38 E-value=0.013 Score=62.94 Aligned_cols=138 Identities=22% Similarity=0.371 Sum_probs=84.4
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 475 PHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
+-+.+++++|.-|+. |+ .++.+..+. ...-++.+|+|.... -+..+.+.+.+ ++++.++-.
T Consensus 157 ~~r~ilI~lGGsDpk-~l--t~kvl~~L~--~~~~nl~iV~gs~~p----------~l~~l~k~~~~---~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDPK-NL--TLKVLAELE--QKNVNLHIVVGSSNP----------TLKNLRKRAEK---YPNINLYID- 217 (318)
T ss_pred chheEEEEccCCChh-hh--HHHHHHHhh--ccCeeEEEEecCCCc----------chhHHHHHHhh---CCCeeeEec-
Confidence 345588899998884 43 344555553 222578888886543 13444555554 456666555
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCc--E--EEcCCCCchhhhccCCcEEEeCC---CCHHHHHH
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP--V--VATKNGGPVDILKALNNGLLVDP---HDQNAIAD 627 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~P--V--Vat~~Gg~~eii~~~~~Gllv~p---~d~~~la~ 627 (1024)
.+++++++..| |.+|.. -|.++.|+...|+| + ++.+--........ -|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHH
Confidence 57899999999 888865 38999999999999 3 33332222222221 1222221 23556677
Q ss_pred HHHHHHhCHHHHHHHH
Q 001705 628 ALLKLLADKNMWSECR 643 (1024)
Q Consensus 628 aI~~ll~d~~~~~~~~ 643 (1024)
.+.++.+|+..+....
T Consensus 286 ~~~~i~~d~~~rk~l~ 301 (318)
T COG3980 286 EILQIQKDYARRKNLS 301 (318)
T ss_pred HHHHhhhCHHHhhhhh
Confidence 7777878877655443
No 185
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.35 E-value=0.0017 Score=84.47 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+-+.++++|+++++. |+.++++|||++..+..+.+++|+
T Consensus 568 plr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 4668899999999998 999999999999999999999887
No 186
>PLN00414 glycosyltransferase family protein
Probab=97.32 E-value=0.6 Score=55.51 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=61.4
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeCC---
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVDP--- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~p--- 619 (1024)
..+.+++|+.+ ++..+ ..++||.- +--.+++||+++|+|+|+-...+= ...+ +....|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44568888765 45444 12456632 334789999999999999764332 2333 34567777742
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001705 620 --HDQNAIADALLKLLADK-NMWSECRKNGLKN 649 (1024)
Q Consensus 620 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 649 (1024)
-+.+++++++.+++.++ +..+++++++++.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 37899999999999864 4556666666654
No 187
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.32 E-value=0.0037 Score=63.67 Aligned_cols=146 Identities=19% Similarity=0.273 Sum_probs=80.6
Q ss_pred CCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CChHHHHHHHHccC-C
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY-ADAGEVAAHLSGAL-N 327 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~-~~~~~~a~~l~~~~-~ 327 (1024)
+|+++++..... ......-|+...|-..+++-. ...+++.++...| +.||||.+|. |-. ++.++..+ +
T Consensus 19 ~GV~~~~y~~~~----~~~~~~~~~~~~~e~~~~rg~-av~~a~~~L~~~G--f~PDvI~~H~GWGe---~Lflkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPR----GPTPGTHPYVRDFEAAVLRGQ-AVARAARQLRAQG--FVPDVIIAHPGWGE---TLFLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCC----CCCCCCCcccccHHHHHHHHH-HHHHHHHHHHHcC--CCCCEEEEcCCcch---hhhHHHhCCC
Confidence 388888877522 233445667777665544433 3344555555554 8999999996 332 23455555 7
Q ss_pred CCEEEEe----CCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcchHHHHH
Q 001705 328 VPMVLTG----HSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERK 403 (1024)
Q Consensus 328 ipiV~t~----H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~~~~~r~ 403 (1024)
+|++... |.-+.+.. + ...+........++..+-..-...+..||..++.|...... |.....
T Consensus 89 a~li~Y~E~~y~~~g~d~~---F-Dpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~-------fP~~~r-- 155 (171)
T PF12000_consen 89 APLIGYFEFYYRASGADVG---F-DPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQ-------FPAEFR-- 155 (171)
T ss_pred CcEEEEEEEEecCCCCcCC---C-CCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHh-------CCHHHH--
Confidence 8887533 32222110 0 00111111222221111112345678999999999866553 443322
Q ss_pred HHHhhhcCccccCCCCCcEEEeCCCCCCCCc
Q 001705 404 LRVRRQRGVSCFGRFMPRMVVIPPGMDFSYV 434 (1024)
Q Consensus 404 l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f 434 (1024)
.||.||+-|||++.+
T Consensus 156 ----------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 ----------------SKISVIHDGIDTDRF 170 (171)
T ss_pred ----------------cCcEEeecccchhhc
Confidence 299999999999765
No 188
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.30 E-value=0.054 Score=59.70 Aligned_cols=166 Identities=13% Similarity=0.071 Sum_probs=110.9
Q ss_pred cEEEEEe-CCCCCCCHHHHHHHHhhccccCCCCcEEEEE--ecCCCcccccccchHHHHHHHHHHHHcCCCCCEE-eCCC
Q 001705 478 PTILALS-RPDPKKNVTTLLKAFGECQPLRELANMTLIL--GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVA-YPKH 553 (1024)
Q Consensus 478 ~~Il~vg-Rld~~Kgi~~ll~A~~~l~~l~~~~~l~LIv--G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~-~~g~ 553 (1024)
++.+-+| .-|+.-+....++++.+.. ..++.+++ |-+ .+++.|..++.+...++--.+++. ...+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~PlsYp-------~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~ 214 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMGYP-------ANNQAYIEEVRQAGLALFGAENFQILTEK 214 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECCcC-------CCCHHHHHHHHHHHHHhcCcccEEehhhh
Confidence 4444445 4688888888888887763 24555544 432 356788999999988876544555 5788
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecC-CCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhccCCcEEEeCCCC--HHHHHHHH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPA-LVEPFGLTIIEAAAYGLPVVATK-NGGPVDILKALNNGLLVDPHD--QNAIADAL 629 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps-~~Egfgl~llEAmA~G~PVVat~-~Gg~~eii~~~~~Gllv~p~d--~~~la~aI 629 (1024)
++.+|..++++.| |+.++-- +..++|..++ .+..|+||+.+. +.--.++.+.+ --++++..+ ...+.++
T Consensus 215 l~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e~- 287 (322)
T PRK02797 215 LPFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVREA- 287 (322)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHHH-
Confidence 9999999999999 8998775 4589998766 688999998875 66667766543 233344322 2222221
Q ss_pred HHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 001705 630 LKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 630 ~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~~~~ 671 (1024)
.+++...-++.+. |+-+...+.+.++++....
T Consensus 288 ---------~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 ---------QRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred ---------HHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 1222222233333 9999999999999886644
No 189
>PLN02562 UDP-glycosyltransferase
Probab=97.28 E-value=0.37 Score=57.38 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=81.5
Q ss_pred CCcEEEEEeCCC---CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCC
Q 001705 476 HKPTILALSRPD---PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPK 552 (1024)
Q Consensus 476 ~~~~Il~vgRld---~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g 552 (1024)
+..+.++.|... +.+-+..++.+++.+. . .+..++..+.. +.+. . ...++ ..+++.+.+
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~-------~---~~~~~--~~~~~~v~~ 334 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLP-------P---GYVER--VSKQGKVVS 334 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCC-------H---HHHHH--hccCEEEEe
Confidence 346778888853 4456777777777763 1 33234432110 0111 0 11111 124667778
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhc-cCCcEEEeCCCCHHHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILK-ALNNGLLVDPHDQNAIAD 627 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~-~~~~Gllv~p~d~~~la~ 627 (1024)
++|+.+ ++..++ .++||. -+--.+.+||+.+|+|+|+-...+= ...+. ....|+-+..-+.+++++
T Consensus 335 w~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~ 405 (448)
T PLN02562 335 WAPQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEE 405 (448)
T ss_pred cCCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHH
Confidence 888764 555541 134552 2334789999999999998764332 22332 235677775568899999
Q ss_pred HHHHHHhCHHHHHH
Q 001705 628 ALLKLLADKNMWSE 641 (1024)
Q Consensus 628 aI~~ll~d~~~~~~ 641 (1024)
+|++++.+++.+++
T Consensus 406 ~v~~~l~~~~~r~~ 419 (448)
T PLN02562 406 GLRKVMEDSGMGER 419 (448)
T ss_pred HHHHHhCCHHHHHH
Confidence 99999988654443
No 190
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.23 E-value=0.75 Score=54.25 Aligned_cols=89 Identities=11% Similarity=0.154 Sum_probs=57.2
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccC-CcEEEeCC--CCHHHHH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKAL-NNGLLVDP--HDQNAIA 626 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~-~~Gllv~p--~d~~~la 626 (1024)
....+..++..++..| |++|-.-+ -.++=|++.|+|+|+-.. .-...++... ...++++. -+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3444556888999999 89885433 357779999999998653 2222333222 22344443 3577899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHH
Q 001705 627 DALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 627 ~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
+.+.+++++.+..++.-+....
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~ 405 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVS 405 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHH
Confidence 9999999987765544433333
No 191
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=97.20 E-value=0.023 Score=62.61 Aligned_cols=85 Identities=18% Similarity=0.190 Sum_probs=55.8
Q ss_pred CcceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCc-hhhhHHHHhcCCC--Ccchh-hHHHHHHHHHHHHHhhhcCCE
Q 001705 303 TWPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLG-RNKFEQLLKQGRL--PKDIN-ASYKIMRRIEAEELGLDASEM 377 (1024)
Q Consensus 303 ~~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~-~~~~~~l~~~g~~--~~~i~-~~y~~~r~i~~e~~~l~~Ad~ 377 (1024)
-+.||+|+... .+++++++++...|+|+++|=|+.. ++....+...... ..... ...++++.+ =+.+++.||.
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~ 248 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADR 248 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCe
Confidence 36799998765 6788999999999999999999974 3443444443333 11111 112233332 3567999999
Q ss_pred EEeCCHHHHHHH
Q 001705 378 VVTSTRQEIEMQ 389 (1024)
Q Consensus 378 Vi~~S~~~~~~~ 389 (1024)
|++..+...+.|
T Consensus 249 I~~l~~~n~~~q 260 (268)
T PF11997_consen 249 ITPLYEYNREWQ 260 (268)
T ss_pred ecccchhhHHHH
Confidence 999987655443
No 192
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.20 E-value=0.034 Score=64.02 Aligned_cols=145 Identities=19% Similarity=0.280 Sum_probs=89.7
Q ss_pred CCCCCcEEEEE-e-CCCC-CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEE
Q 001705 473 TNPHKPTILAL-S-RPDP-KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVA 549 (1024)
Q Consensus 473 ~~~~~~~Il~v-g-Rld~-~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~ 549 (1024)
.++++++|..+ | |-.. ++.++.+++++..+. ...|++.+++...+. .....+.......+..-.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~--~~~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLK--KQRPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHH--HhCCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEE
Confidence 45666655443 3 4433 456688999999995 466888887754432 11122334444444322333
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCCchh----------------hhccCC
Q 001705 550 YPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGGPVD----------------ILKALN 612 (1024)
Q Consensus 550 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg~~e----------------ii~~~~ 612 (1024)
.. ..+-.+.++.| |+.+..| |.+-+|++.+|+|+|..- .+...- |+.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34678899999 8988776 999999999999998753 333222 211100
Q ss_pred --cEEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001705 613 --NGLLVDPHDQNAIADALLKLLADKNMWSE 641 (1024)
Q Consensus 613 --~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 641 (1024)
.-++-+.-+++.+++++..++.|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 01222345799999999999999876443
No 193
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.19 E-value=0.049 Score=59.50 Aligned_cols=136 Identities=18% Similarity=0.262 Sum_probs=78.3
Q ss_pred HHhhhhCCCCCcEEEE------EeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHH
Q 001705 467 EVMRFFTNPHKPTILA------LSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 467 ~~~~~~~~~~~~~Il~------vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~ 540 (1024)
.++++....+.++|+. ..-....+++..+.++++++.+ .+ +|+-.++. ...+.+.
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g---iV~ipr~~-------------~~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG---IVLIPREK-------------EQAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc---EEEecCch-------------hHHHHHh
Confidence 3445555565666654 1112346778778888888742 23 33333332 1123344
Q ss_pred HcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC---CchhhhccCCcEEEe
Q 001705 541 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG---GPVDILKALNNGLLV 617 (1024)
Q Consensus 541 ~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G---g~~eii~~~~~Gllv 617 (1024)
.+. ++..+... .+.+.-+|.+. +++ .+-|.-.-||++.|+|.|++..| +..+... +.|+++
T Consensus 233 ~~~---n~i~pk~~-vD~l~Llyya~-----lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKKA-VDTLSLLYYAT-----LVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCccc-ccHHHHHhhhh-----eee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 432 33333221 22244444443 544 34577889999999999999865 3333332 469999
Q ss_pred CCCCHHHHHHHHHHHHhCHH
Q 001705 618 DPHDQNAIADALLKLLADKN 637 (1024)
Q Consensus 618 ~p~d~~~la~aI~~ll~d~~ 637 (1024)
+..|+.++.+...+++.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 98898877777777776654
No 194
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.14 E-value=0.98 Score=53.79 Aligned_cols=93 Identities=19% Similarity=0.320 Sum_probs=58.3
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhccC-CcEEEeC-C
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKAL-NNGLLVD-P 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~~-~~Gllv~-p 619 (1024)
++....+++|+.+ ++... ..++||.- -|+ .+++||+++|+|+|+-...+= ...+.+. +.|+-+. .
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~--~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHP--AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCC--ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4555668888875 55553 11456632 233 588999999999999764332 2222222 5677663 3
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 620 HDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
-+.++++++|++++.+++ .+++++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAIS 422 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHHH
Confidence 478899999999998754 3344444443
No 195
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.07 E-value=0.31 Score=54.41 Aligned_cols=335 Identities=17% Similarity=0.178 Sum_probs=168.1
Q ss_pred ceEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcC--CCceEEEEEecCCCCCCCCcccCCCccccCCCCCC
Q 001705 169 NLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANT--EGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246 (1024)
Q Consensus 169 ~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~--g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~ 246 (1024)
.|||+|-|.|. +|- |.-+....+|++|.+. | .+|.++|....-+..
T Consensus 9 ~~Ri~~Yshd~--------~Gl-----GHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F----------------- 56 (400)
T COG4671 9 RPRILFYSHDL--------LGL-----GHLRRALRIAHALVEDYLG--FDILIISGGPPAGGF----------------- 56 (400)
T ss_pred cceEEEEehhh--------ccc-----hHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCC-----------------
Confidence 46999999663 443 7888899999999998 8 999999987432221
Q ss_pred CCCCCeEEEEecCCCC---CCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHH-----
Q 001705 247 TGSCGAYIIRIPCGAR---DKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEV----- 318 (1024)
Q Consensus 247 ~~~~gv~i~rip~~~~---~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~----- 318 (1024)
....|+..+.+|+-.+ ..|-.... -..+++|...--..+. ..+. .++||++.+.....|..
T Consensus 57 ~~~~gVd~V~LPsl~k~~~G~~~~~d~-~~~l~e~~~~Rs~lil---~t~~-------~fkPDi~IVd~~P~Glr~EL~p 125 (400)
T COG4671 57 PGPAGVDFVKLPSLIKGDNGEYGLVDL-DGDLEETKKLRSQLIL---STAE-------TFKPDIFIVDKFPFGLRFELLP 125 (400)
T ss_pred CCcccCceEecCceEecCCCceeeeec-CCCHHHHHHHHHHHHH---HHHH-------hcCCCEEEEeccccchhhhhhH
Confidence 1124888899987322 11212211 1123444332222221 1222 27899999987654422
Q ss_pred -HHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCHHHHHHHHhcccCcc
Q 001705 319 -AAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFD 397 (1024)
Q Consensus 319 -a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~~~~~f~ 397 (1024)
...++. .+.+.|.-+.++ ++.... ... -.++-..++.+-+.-|.|.++..-.......-|+ |.
T Consensus 126 tL~yl~~-~~t~~vL~lr~i-~D~p~~---~~~----------~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~-~~ 189 (400)
T COG4671 126 TLEYLKT-TGTRLVLGLRSI-RDIPQE---LEA----------DWRRAETVRLINRFYDLVLVYGDPDFYDPLTEFP-FA 189 (400)
T ss_pred HHHHHhh-cCCcceeehHhh-hhchhh---hcc----------chhhhHHHHHHHHhheEEEEecCccccChhhcCC-cc
Confidence 122222 234555555443 111000 000 0122222344556788898876543322222222 11
Q ss_pred hHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCCcchHHHhhhhCCCCC
Q 001705 398 LKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHK 477 (1024)
Q Consensus 398 ~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 477 (1024)
+.+ +-.+.+-|.= .+-.+.. +.|.-+ .+...
T Consensus 190 ~~i--------------------~~k~~ytG~v-q~~~~~~---------------------~~p~~~-------~pE~~ 220 (400)
T COG4671 190 PAI--------------------RAKMRYTGFV-QRSLPHL---------------------PLPPHE-------APEGF 220 (400)
T ss_pred Hhh--------------------hhheeEeEEe-eccCcCC---------------------CCCCcC-------CCccc
Confidence 211 2223333321 0000100 001100 02345
Q ss_pred cEEEEEeCC-CCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001705 478 PTILALSRP-DPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 478 ~~Il~vgRl-d~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~ 556 (1024)
.+++.+|.- +...=+...+.|...+..+. .+..+|.|.- |. ....+++.. ...-.++|.+..+ .
T Consensus 221 ~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~--~~~~ivtGP~-----MP---~~~r~~l~~---~A~~~p~i~I~~f--~ 285 (400)
T COG4671 221 DILVSVGGGADGAELIETALAAAQLLAGLN--HKWLIVTGPF-----MP---EAQRQKLLA---SAPKRPHISIFEF--R 285 (400)
T ss_pred eEEEecCCChhhHHHHHHHHHHhhhCCCCC--cceEEEeCCC-----CC---HHHHHHHHH---hcccCCCeEEEEh--h
Confidence 567777763 22333444555555543322 1244455532 21 223344443 3333467888777 7
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchh--hhccC---CcEE--EeCCC--CHHHHHH
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD--ILKAL---NNGL--LVDPH--DQNAIAD 627 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~e--ii~~~---~~Gl--lv~p~--d~~~la~ 627 (1024)
+++..|+..| +..|.- -|+ +|..|-+.+|+|-+.-..+.+.+ +++.. .-|+ ++.|. .++.+|+
T Consensus 286 ~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~ 357 (400)
T COG4671 286 NDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLAD 357 (400)
T ss_pred hhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHH
Confidence 8999999999 676632 244 56779999999988876555443 22211 1122 22233 3677777
Q ss_pred HHHHHHh
Q 001705 628 ALLKLLA 634 (1024)
Q Consensus 628 aI~~ll~ 634 (1024)
+|..++.
T Consensus 358 al~~~l~ 364 (400)
T COG4671 358 ALKAALA 364 (400)
T ss_pred HHHhccc
Confidence 7777766
No 196
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.07 E-value=0.0046 Score=67.00 Aligned_cols=68 Identities=10% Similarity=-0.001 Sum_probs=54.2
Q ss_pred EEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEecCCceEE
Q 001705 753 AADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRR-CTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 753 a~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaT---GR~~~~~~~~l~~-~~i~~~~~d~lI~~nGa~I~ 826 (1024)
.||+||||.+.+..+ +.+.++|+.++++ |+.+++.| ||+...+.+.|.. ++++ ..++-+|++..+...
T Consensus 2 lfD~DGvL~~~~~~~-~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~-~~~~~iits~~~~~~ 73 (236)
T TIGR01460 2 LFDIDGVLWLGHKPI-PGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVD-VSPDQIITSGSVTKD 73 (236)
T ss_pred EEeCcCccCcCCccC-cCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCC-CCHHHeeeHHHHHHH
Confidence 489999988875544 4888999999987 89999998 9999999998888 7886 356677776555443
No 197
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.04 E-value=0.061 Score=60.92 Aligned_cols=153 Identities=13% Similarity=0.134 Sum_probs=90.0
Q ss_pred HhhhhCCCCCcEEE-EEeC-CC-CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHH-HHHHcC
Q 001705 468 VMRFFTNPHKPTIL-ALSR-PD-PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLK-LIDKYD 543 (1024)
Q Consensus 468 ~~~~~~~~~~~~Il-~vgR-ld-~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~-~i~~~~ 543 (1024)
+.++..+.+.++|. ..|. -. -.+....+++|+.++. ...|++.+++-.... ...++.. ..+...
T Consensus 179 r~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~--~~~~~~~~vlp~~~~----------~~~~~~~~~~~~~~ 246 (381)
T COG0763 179 REKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELK--ARYPDLKFVLPLVNA----------KYRRIIEEALKWEV 246 (381)
T ss_pred HHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHH--hhCCCceEEEecCcH----------HHHHHHHHHhhccc
Confidence 34444555555443 3443 22 2456778888888885 466888887754331 1122222 222222
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCC----------------chh
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGG----------------PVD 606 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg----------------~~e 606 (1024)
....+. +...+-...+..| |+.+..| |.+.+|+|.+|+|+|++- ... ++.
T Consensus 247 ~~~~~~----~~~~~~~~a~~~a----D~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpN 313 (381)
T COG0763 247 AGLSLI----LIDGEKRKAFAAA----DAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPN 313 (381)
T ss_pred cCceEE----ecCchHHHHHHHh----hHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchH
Confidence 111222 2345778899999 8988765 999999999999998763 322 223
Q ss_pred hhccCCcEEEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 607 ILKALNNGLLV-----DPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 607 ii~~~~~Gllv-----~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
|+.+ -.+| ..-.++.++.++..++.|+..++++.+...+
T Consensus 314 Ii~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~ 357 (381)
T COG0763 314 ILAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRE 357 (381)
T ss_pred HhcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHH
Confidence 3221 1112 1235889999999999998655555444433
No 198
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.03 E-value=0.003 Score=77.68 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=45.3
Q ss_pred ccceeEEEEEecCCCCC---CCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 745 RRQMLIVIAADCYDSDG---NTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 745 ~~~rlllIa~DlDGTl~---~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
...+.+.++.| +++. .-...+-+..+++++++++. |+++++.||-+...+..+.+++|+
T Consensus 424 ~G~r~l~va~~--~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 424 QGGTPLVVCED--NRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CCCeEEEEEEC--CEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 33456666665 4411 11234678999999999998 999999999999999999999887
No 199
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.01 E-value=0.0038 Score=80.72 Aligned_cols=147 Identities=16% Similarity=0.241 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.+.++|+++++. |++++++||.+...+..+.+++|+.. . +..+... .
T Consensus 537 plr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi~~--~-------~~~v~~~----------------~ 587 (917)
T TIGR01116 537 PPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGIFS--P-------DEDVTFK----------------S 587 (917)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCCCC--C-------Cccccce----------------e
Confidence 4568889999999987 99999999999999999999988831 1 1100000 0
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
.....+ ..+ .+ +++.+... ++ ++ +-.+.|.
T Consensus 588 ~~g~~l----~~~---------------------------~~-------~~~~~~~~----~~-~v------~ar~~P~- 617 (917)
T TIGR01116 588 FTGREF----DEM---------------------------GP-------AKQRAACR----SA-VL------FSRVEPS- 617 (917)
T ss_pred eeHHHH----hhC---------------------------CH-------HHHHHhhh----cC-eE------EEecCHH-
Confidence 000000 000 00 01111111 11 12 2233343
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEe
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYI 1005 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~v 1005 (1024)
.|...++.+.+ ..++++++||+.| | .+||+.|+.||+|+ +|.+..+++|| ++
T Consensus 618 -~K~~iV~~lq~-----~g~~va~iGDG~N-D-~~alk~AdVGia~g----~g~~~ak~aAD----------------~v 669 (917)
T TIGR01116 618 -HKSELVELLQE-----QGEIVAMTGDGVN-D-APALKKADIGIAMG----SGTEVAKEASD----------------MV 669 (917)
T ss_pred -HHHHHHHHHHh-----cCCeEEEecCCcc-h-HHHHHhCCeeEECC----CCcHHHHHhcC----------------eE
Confidence 47777776542 2346666799999 9 99999999999999 99988899999 66
Q ss_pred ccccChhHHHHHHH
Q 001705 1006 EESYEPQDLSAALK 1019 (1024)
Q Consensus 1006 t~~~~~dgI~~aL~ 1019 (1024)
..+.+=..|..+++
T Consensus 670 l~dd~f~~i~~~i~ 683 (917)
T TIGR01116 670 LADDNFATIVAAVE 683 (917)
T ss_pred EccCCHHHHHHHHH
Confidence 55544455666653
No 200
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.99 E-value=0.0057 Score=67.79 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=40.8
Q ss_pred ecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 922 VPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 922 ~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
++..-.+...+.++++++|++++++++| ||+.+ | ++|-+.+|. ++.+.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~I-GD~~~-D-i~aA~~aGi~~i~v~ 201 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLFV-GDSRS-D-VLAAKAAGVQCVALS 201 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEEE-CCCHH-H-HHHHHHCCCeEEEEe
Confidence 3445567789999999999999999996 99999 9 999999997 45555
No 201
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=96.96 E-value=1.4 Score=52.67 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=54.7
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeCC--
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVDP-- 619 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~p-- 619 (1024)
.+.+.+++|+.+ ++...+ .+.||. -+-..+++||+.+|+|+|+-...+= ...+ ...+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477788988775 455541 134552 2334689999999999999775432 2233 34566877753
Q ss_pred --CCHHHHHHHHHHHHhCH
Q 001705 620 --HDQNAIADALLKLLADK 636 (1024)
Q Consensus 620 --~d~~~la~aI~~ll~d~ 636 (1024)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 36889999999999763
No 202
>PF09210 DUF1957: Domain of unknown function (DUF1957); InterPro: IPR015293 This C-terminal domain is found in a set of hypothetical bacterial proteins that have a N-terminal domain related to the glycoside hydrolase family 57 family GH57 from CAZY. The exact function of this domain has not, as yet, been defined. ; PDB: 3N98_A 3N8T_A 3N92_A 1UFA_A 3P0B_A.
Probab=96.95 E-value=4.4e-05 Score=70.51 Aligned_cols=79 Identities=20% Similarity=0.141 Sum_probs=56.9
Q ss_pred chhhhhhhhhhhhHHHHHHhhhhh---hhchHHHHHHHHHHHHHHhcCccccccccccCccccccCCCCCcccccCcccc
Q 001705 76 NTRERSNRLENMCWRIWHLARKKK---QIAWEDAQRLAKRRLEREQGRNDAADDLSELSEGEKEKGDSINASESLKEIPR 152 (1024)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (1024)
++.+=..|+=|.+.|=+=||---- -|..+++++||++|++.|+.||..+.++ |..|+.+.+.|.++|..++.||.
T Consensus 19 ~~~~l~~R~LnQaaRElLLaqSSDW~Fii~~gta~~YA~~R~~~Hl~rF~~L~~~--l~~~~id~~~L~~~E~~d~iFp~ 96 (102)
T PF09210_consen 19 DADGLRERALNQAARELLLAQSSDWAFIITTGTAVEYARERFKEHLNRFWRLYDM--LESGRIDEEWLEELEEKDNIFPD 96 (102)
T ss_dssp TSSHCHHHHHHHHHHHHHHHCBTHHHHCCCCTTTHHHHHHHHHHHHHHHHHHHHH--HHHS---HHHHHHHHHHS---TT
T ss_pred CcchHHHHHHHHHHHHHHHHHhCccHHHHcCCChHHHHHHHHHHHHHHHHHHHHH--HHcCCcCHHHHHHHHHHcCCCcc
Confidence 344555677777777766653221 1677899999999999999999999999 88999988889999999999999
Q ss_pred cccc
Q 001705 153 INSD 156 (1024)
Q Consensus 153 ~~~~ 156 (1024)
||++
T Consensus 97 idyr 100 (102)
T PF09210_consen 97 IDYR 100 (102)
T ss_dssp --GG
T ss_pred cCCC
Confidence 9986
No 203
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.93 E-value=0.0035 Score=76.75 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=45.0
Q ss_pred CCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHH
Q 001705 944 SKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 944 ~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~ 1019 (1024)
+++++ +||+.| | .+|++.+|.||+|| ++.+..+..|| ++..+.+-++|..+++
T Consensus 448 ~~v~~-vGDg~n-D-~~al~~A~vgia~g----~~~~~~~~~Ad----------------~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 448 GVVAM-VGDGIN-D-APALAAADVGIAMG----AGSDVAIEAAD----------------IVLLNDDLSSLPTAID 500 (556)
T ss_pred CEEEE-EECChh-H-HHHHhhCCEeEEeC----CCCHHHHHhCC----------------EEEeCCCHHHHHHHHH
Confidence 46766 599999 9 99999999999999 88888888999 7767777888887764
No 204
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.90 E-value=0.11 Score=58.12 Aligned_cols=163 Identities=15% Similarity=0.136 Sum_probs=106.2
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEE--ecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe-CCC
Q 001705 477 KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLIL--GNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY-PKH 553 (1024)
Q Consensus 477 ~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIv--G~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~-~g~ 553 (1024)
+..|+.--.-|+.-+....++++.... . .+..+++ |-+. ++++|..++.+...++--.+++.. ..+
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~--~--~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~e~ 253 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQF--G--DDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILTEF 253 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhc--C--CCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhhhh
Confidence 444555445788888888888887652 2 3455544 5442 356788999998888755556654 679
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhccCCcEEEe--CCCCHHHHHHHH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGP-VDILKALNNGLLV--DPHDQNAIADAL 629 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~-~eii~~~~~Gllv--~p~d~~~la~aI 629 (1024)
++.+|..++++.| |+.++... ..++|..++ .+.+|+||+.+..... .++.+. .--+++ |.-|...+++|=
T Consensus 254 mpf~eYl~lL~~c----Dl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~-~ipVlf~~d~L~~~~v~ea~ 327 (360)
T PF07429_consen 254 MPFDEYLALLSRC----DLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQ-GIPVLFYGDELDEALVREAQ 327 (360)
T ss_pred CCHHHHHHHHHhC----CEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhC-CCeEEeccccCCHHHHHHHH
Confidence 9999999999999 99999875 489987665 7899999998875444 455433 222333 333455555555
Q ss_pred HHHHh-CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 001705 630 LKLLA-DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEH 668 (1024)
Q Consensus 630 ~~ll~-d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~~~ 668 (1024)
+++.. |++ . -.|.-+...+.+.+.+.-
T Consensus 328 rql~~~dk~-----------~-iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 328 RQLANVDKQ-----------Q-IAFFAPNYLQGWRQALRL 355 (360)
T ss_pred HHHhhCccc-----------c-eeeeCCchHHHHHHHHHH
Confidence 44433 211 1 135556666666666653
No 205
>PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function. This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM.
Probab=96.90 E-value=0.00041 Score=48.54 Aligned_cols=25 Identities=28% Similarity=0.752 Sum_probs=18.4
Q ss_pred HHHhcchhhhhhhhhhhhHHHHHHh
Q 001705 71 VIATRNTRERSNRLENMCWRIWHLA 95 (1024)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1024)
.+.++..-+=..||||++||+|+.+
T Consensus 5 ~~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 5 YTKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred HhhhhhhcCcchhHHHHHHHHHhcC
Confidence 3444545555889999999999863
No 206
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.89 E-value=0.093 Score=55.90 Aligned_cols=198 Identities=14% Similarity=0.073 Sum_probs=109.9
Q ss_pred CcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+||++.+....+..++.++.++.+.+.++.+.+- .- -...-|+||.+-
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~P------------------rl-------------p~~~fDlvivp~ 117 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDP------------------RL-------------PYNHFDLVIVPY 117 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCC------------------CC-------------CcccceEEeccc
Confidence 58999999998899999999988877665555421 10 134578999998
Q ss_pred HHHHHHHHhcccCcchHHHHHHHHhhhcCccccCCCCCcEEEeCCCCCCCCccccCCCCCCccccccccCccccccCCCC
Q 001705 383 RQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP 462 (1024)
Q Consensus 383 ~~~~~~~~~~~~~f~~~~~r~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p 462 (1024)
.+.++++-.- ...++|.-=.+..+.+.. ..
T Consensus 118 HD~~~~~s~~----------------------------~~Nilpi~Gs~h~Vt~~~----------------------lA 147 (329)
T COG3660 118 HDWREELSDQ----------------------------GPNILPINGSPHNVTSQR----------------------LA 147 (329)
T ss_pred hhhhhhhhcc----------------------------CCceeeccCCCCcccHHH----------------------hh
Confidence 8877752111 223344211222222211 00
Q ss_pred cchHHHhhhhCCCCCcEEEEEeCCCCCCCH-----HHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHH
Q 001705 463 PMWSEVMRFFTNPHKPTILALSRPDPKKNV-----TTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVL 536 (1024)
Q Consensus 463 ~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi-----~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~ 536 (1024)
...+...++.-.+...+-+.||.-.+.-.+ ..+..++-+.. ......+ +--++... ..+.
T Consensus 148 a~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l---~~~g~~~lisfSRRTp-----------~~~~ 213 (329)
T COG3660 148 ALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKIL---ENQGGSFLISFSRRTP-----------DTVK 213 (329)
T ss_pred hhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHH---HhCCceEEEEeecCCc-----------HHHH
Confidence 111122233334566788888887654443 22222222221 1122223 33333222 2223
Q ss_pred HHHHH-cCCCCCEEeCCC-CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCC
Q 001705 537 KLIDK-YDLYGQVAYPKH-HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNG 602 (1024)
Q Consensus 537 ~~i~~-~~l~~~V~~~g~-~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~G 602 (1024)
..+.. +.-.+.+++.+. -..+-..+++.+| |.+|.+.-.-.| +-||++.|+||.+-...
T Consensus 214 s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSinM---~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 214 SILKNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSINM---CSEAASTGKPVFILEPP 274 (329)
T ss_pred HHHHhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhhh---hHHHhccCCCeEEEecC
Confidence 33333 455555666554 2345688999999 999998654443 78999999999776543
No 207
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.87 E-value=0.01 Score=75.19 Aligned_cols=151 Identities=16% Similarity=0.145 Sum_probs=99.4
Q ss_pred ccceeEEEEE-ecCC--C---CCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEE
Q 001705 745 RRQMLIVIAA-DCYD--S---DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIV 818 (1024)
Q Consensus 745 ~~~rlllIa~-DlDG--T---l~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI 818 (1024)
...|.+.+|+ |.++ + +..-...+-+..+++++++++. |+++++.||.+...+..+.+++||.. + +
T Consensus 415 ~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~~---~-~- 485 (755)
T TIGR01647 415 RGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLGT---N-I- 485 (755)
T ss_pred CCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCCC---C-C-
Confidence 4456777777 4322 3 1111234668899999999998 99999999999999999999999831 0 0
Q ss_pred ecCCceEEcCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHH
Q 001705 819 CNSGSELYFPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIR 898 (1024)
Q Consensus 819 ~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 898 (1024)
. .|..+.. .. ..+ .. .-+++.
T Consensus 486 ~-~~~~l~~--------------------------------~~-------~~~------------~~-------~~~~~~ 506 (755)
T TIGR01647 486 Y-TADVLLK--------------------------------GD-------NRD------------DL-------PSGELG 506 (755)
T ss_pred c-CHHHhcC--------------------------------Cc-------chh------------hC-------CHHHHH
Confidence 0 0100000 00 000 00 012344
Q ss_pred HHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCC
Q 001705 899 QRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYG 978 (1024)
Q Consensus 899 ~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA 978 (1024)
+.+... . -+-++.|. .|..-++.|.+ .| ++++++||+-| | .+.|+.++.||||+ +|
T Consensus 507 ~~~~~~----~-------vfAr~~Pe--~K~~iV~~lq~-~G----~~VamvGDGvN-D-apAL~~AdVGIAm~----~g 562 (755)
T TIGR01647 507 EMVEDA----D-------GFAEVFPE--HKYEIVEILQK-RG----HLVGMTGDGVN-D-APALKKADVGIAVA----GA 562 (755)
T ss_pred HHHHhC----C-------EEEecCHH--HHHHHHHHHHh-cC----CEEEEEcCCcc-c-HHHHHhCCeeEEec----CC
Confidence 444321 1 14455564 58888888754 33 46777899999 9 99999999999999 99
Q ss_pred hHHHhcccc
Q 001705 979 SEKLLHGED 987 (1024)
Q Consensus 979 ~~elk~~ad 987 (1024)
++-.+++||
T Consensus 563 tdvAkeaAD 571 (755)
T TIGR01647 563 TDAARSAAD 571 (755)
T ss_pred cHHHHHhCC
Confidence 998899999
No 208
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.83 E-value=0.0021 Score=62.72 Aligned_cols=54 Identities=11% Similarity=0.015 Sum_probs=43.9
Q ss_pred EEEEecCCCCCCCc----h--------hhHHHHHHHHHHHhhccCCCCeEEEEECCC-CHHHHHHHHHhcC
Q 001705 751 VIAADCYDSDGNTT----E--------TFQATIKNVMKAAGLSLGLGRVGFILVTGS-SLGETMEAIRRCT 808 (1024)
Q Consensus 751 lIa~DlDGTl~~~~----~--------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR-~~~~~~~~l~~~~ 808 (1024)
+|++|+||||.+.. + .+-+.+.++|+.|+++ |+.++|+|++ +...+...++..+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 56799999977652 1 1467999999999987 9999999999 7777778888765
No 209
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.80 E-value=1.9 Score=51.72 Aligned_cols=138 Identities=13% Similarity=0.151 Sum_probs=75.7
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+..+.++.|.... .+-+..++.+++... ..+..+++...+.... ....-..+.+.+. ...+...++
T Consensus 283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~----~~g~~v~~w 350 (477)
T PLN02863 283 HKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA----GRGLVIRGW 350 (477)
T ss_pred CceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc----cCCEEecCC
Confidence 3456677787643 233666677766552 2444455532111000 0000111112111 235777789
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hccCCcEEEeCC-----CCHH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDI-LKALNNGLLVDP-----HDQN 623 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~ei-i~~~~~Gllv~p-----~d~~ 623 (1024)
+|+. +++... +.++||.- -| -.+.+||+++|+|+|+-...+ .... ++..+.|+.+.. -+.+
T Consensus 351 ~PQ~---~vL~h~--~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~ 421 (477)
T PLN02863 351 APQV---AILSHR--AVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421 (477)
T ss_pred CCHH---HHhcCC--CcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHH
Confidence 8875 456553 12667632 23 358899999999999976433 2222 233466776621 2678
Q ss_pred HHHHHHHHHHh
Q 001705 624 AIADALLKLLA 634 (1024)
Q Consensus 624 ~la~aI~~ll~ 634 (1024)
++++++.+++.
T Consensus 422 ~v~~~v~~~m~ 432 (477)
T PLN02863 422 ELARVFMESVS 432 (477)
T ss_pred HHHHHHHHHhh
Confidence 99999999884
No 210
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.79 E-value=0.021 Score=73.50 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-++++++++++++. ||++++.||=+...+..+.+++||. .+.++ .|.++
T Consensus 550 p~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI~---~~~vi--~G~el-------------------- 600 (903)
T PRK15122 550 PPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGLE---PGEPL--LGTEI-------------------- 600 (903)
T ss_pred ccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC---CCCcc--chHhh--------------------
Confidence 5678999999999998 9999999999999999999999883 11000 01000
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
. .+ . -+++.+.+.. ++ -+-.+.|.
T Consensus 601 ------~----~~---------------------------~-------~~el~~~v~~----~~-------VfAr~sPe- 624 (903)
T PRK15122 601 ------E----AM---------------------------D-------DAALAREVEE----RT-------VFAKLTPL- 624 (903)
T ss_pred ------h----hC---------------------------C-------HHHHHHHhhh----CC-------EEEEeCHH-
Confidence 0 00 0 0123333321 11 13344443
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | ++|+++||+-| | .+.|+.|+.||||| +|++-.|++||
T Consensus 625 -~K~~iV~~Lq~~-G----~vVamtGDGvN-D-aPALk~ADVGIAmg----~gtdvAkeaAD 674 (903)
T PRK15122 625 -QKSRVLKALQAN-G----HTVGFLGDGIN-D-APALRDADVGISVD----SGADIAKESAD 674 (903)
T ss_pred -HHHHHHHHHHhC-C----CEEEEECCCch-h-HHHHHhCCEEEEeC----cccHHHHHhcC
Confidence 477777777643 2 47777899999 9 99999999999999 99988899999
No 211
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.71 E-value=0.024 Score=73.16 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=47.2
Q ss_pred ccceeEEEEEec---CCC---CCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 745 RRQMLIVIAADC---YDS---DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 745 ~~~rlllIa~Dl---DGT---l~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
...|.+.+|++- |.| +..-...+-+.++++++++++. |+++++.||-+...+..+.+++|+.
T Consensus 501 ~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 501 AGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred cCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 344667777653 223 1111235678999999999987 9999999999999999999999984
No 212
>PLN02764 glycosyltransferase family protein
Probab=96.67 E-value=2.2 Score=50.68 Aligned_cols=93 Identities=17% Similarity=0.160 Sum_probs=61.0
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeCC---
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVDP--- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~p--- 619 (1024)
+...+++|+.+ ++... ..++||.- +-..+.+||+++|+|+|+-...+= ...+ +....|+.+.+
T Consensus 319 ~v~~~W~PQ~~---vL~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPL---ILSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHH---HhcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 56668888875 44443 12556632 334789999999999999775442 2233 33455666532
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001705 620 --HDQNAIADALLKLLADK-NMWSECRKNGLKN 649 (1024)
Q Consensus 620 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 649 (1024)
-+.+++++++.+++.++ +..+++++++++.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~ 422 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKW 422 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 27899999999999875 4556666666554
No 213
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.67 E-value=0.028 Score=65.93 Aligned_cols=178 Identities=13% Similarity=0.140 Sum_probs=122.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCC-CCEEe
Q 001705 473 TNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY-GQVAY 550 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~-~~V~~ 550 (1024)
++++..+++++++ +.|-.+.++.-+-++ ++.-|+-+| +.|++++ +++...++.++++.|+. .++.|
T Consensus 426 lp~~avVf~c~~n--~~K~~pev~~~wmqI--L~~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~f 493 (620)
T COG3914 426 LPEDAVVFCCFNN--YFKITPEVFALWMQI--LSAVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSERLRF 493 (620)
T ss_pred CCCCeEEEEecCC--cccCCHHHHHHHHHH--HHhCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChhheee
Confidence 3455444444444 566667777777666 355566555 5555543 56789999999999884 67999
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-------CCCCchhhhcc-CCcEEEeCCCCH
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT-------KNGGPVDILKA-LNNGLLVDPHDQ 622 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat-------~~Gg~~eii~~-~~~Gllv~p~d~ 622 (1024)
.+..+.++..+.|..| |+++=+--+ |-..|.+|++-+|+|||.- .+|+ -|+.+ |-.-++.+ +.
T Consensus 494 ~p~~~~~~h~a~~~iA----DlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~vA~--s~ 564 (620)
T COG3914 494 LPPAPNEDHRARYGIA----DLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELVAD--SR 564 (620)
T ss_pred cCCCCCHHHHHhhchh----heeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhhcC--CH
Confidence 9999999999999999 998855333 3358999999999999863 3444 22222 22233443 55
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhh
Q 001705 623 NAIADALLKLLADKNMWSECRKNGLKNI-H--RFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~~~ 671 (1024)
++..+.-..+=.|..++++.+....+.. . -|+.+..++++.+.|..+-+
T Consensus 565 ~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 565 ADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 5554444455567777888777766665 2 69999999999999987654
No 214
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.67 E-value=0.014 Score=74.97 Aligned_cols=125 Identities=14% Similarity=0.196 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.++++++++++. |+++++.||-+...+..+.+++||.. .+ ++ .|..+..
T Consensus 515 p~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI~~--~~-v~--~g~~l~~------------------ 567 (867)
T TIGR01524 515 PPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGIDA--ND-FL--LGADIEE------------------ 567 (867)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCCC--CC-ee--ecHhhhh------------------
Confidence 4668899999999998 99999999999999999999999831 11 10 0110000
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
+ . -+++.+.+.. +++ +-.+.|.
T Consensus 568 ------------~---------------------------~-------~~el~~~~~~----~~v-------fAr~~Pe- 589 (867)
T TIGR01524 568 ------------L---------------------------S-------DEELARELRK----YHI-------FARLTPM- 589 (867)
T ss_pred ------------C---------------------------C-------HHHHHHHhhh----CeE-------EEECCHH-
Confidence 0 0 0122222211 111 2223332
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | ++++++||+-| | .++|+.|+.||||| +|++-.|++||
T Consensus 590 -~K~~iV~~lq~~-G----~vVam~GDGvN-D-apALk~AdVGIAmg----~gtdvAk~aAD 639 (867)
T TIGR01524 590 -QKSRIIGLLKKA-G----HTVGFLGDGIN-D-APALRKADVGISVD----TAADIAKEASD 639 (867)
T ss_pred -HHHHHHHHHHhC-C----CEEEEECCCcc-c-HHHHHhCCEEEEeC----CccHHHHHhCC
Confidence 477666666542 2 46777899999 9 99999999999999 99988899999
No 215
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.65 E-value=0.016 Score=74.67 Aligned_cols=125 Identities=17% Similarity=0.196 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-++++++++++++. |+++++.||-+...+..+.+++||. .+.++ .|.+
T Consensus 550 p~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~---~~~v~--~G~e--------------------- 599 (902)
T PRK10517 550 PPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGLD---AGEVL--IGSD--------------------- 599 (902)
T ss_pred cchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC---ccCce--eHHH---------------------
Confidence 4668999999999998 9999999999999999999999983 11010 0110
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
+. .+ . -+++.+.++.. .+ +-.+.|.
T Consensus 600 -----l~----~l---------------------------~-------~~el~~~~~~~----~V-------fAr~sPe- 624 (902)
T PRK10517 600 -----IE----TL---------------------------S-------DDELANLAERT----TL-------FARLTPM- 624 (902)
T ss_pred -----HH----hC---------------------------C-------HHHHHHHHhhC----cE-------EEEcCHH-
Confidence 00 00 0 01233333221 11 2334443
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | ++|+++||+-| | .+.|+.|+.||||| +|.+-.|++||
T Consensus 625 -~K~~IV~~Lq~~-G----~vVam~GDGvN-D-aPALk~ADVGIAmg----~gtdvAkeaAD 674 (902)
T PRK10517 625 -HKERIVTLLKRE-G----HVVGFMGDGIN-D-APALRAADIGISVD----GAVDIAREAAD 674 (902)
T ss_pred -HHHHHHHHHHHC-C----CEEEEECCCcc-h-HHHHHhCCEEEEeC----CcCHHHHHhCC
Confidence 577777777542 3 47777899999 9 99999999999999 99988899999
No 216
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.64 E-value=0.011 Score=77.31 Aligned_cols=154 Identities=10% Similarity=0.115 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.+.++|+++++. ||++++.||.+...+..+.+++||.. .+ .+ ... +..
T Consensus 646 p~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi~~--~~-~~-------~~~------~~~-------- 697 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGIIP--PN-FI-------HDR------DEI-------- 697 (1053)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCCC--cc-cc-------ccc------ccc--------
Confidence 3568889999999997 99999999999999999999999831 11 10 000 000
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
.. . . +....... . .. -+++.+.+.. +. ++ -.+.|.
T Consensus 698 ~~---------~--~-------vitG~~l~-------~-l~-------~~~l~~~~~~----~~-V~------ar~sP~- 732 (1053)
T TIGR01523 698 MD---------S--M-------VMTGSQFD-------A-LS-------DEEVDDLKAL----CL-VI------ARCAPQ- 732 (1053)
T ss_pred cc---------c--e-------eeehHHhh-------h-cC-------HHHHHHHhhc----Ce-EE------EecCHH-
Confidence 00 0 0 00000000 0 00 0123222221 11 21 223332
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEe
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYI 1005 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~v 1005 (1024)
.|..-++.|.+. | ++++++||+-| | .+||+.++.||||| .+|.+-.+++|| ++
T Consensus 733 -~K~~iV~~lq~~-g----~~Vam~GDGvN-D-apaLk~AdVGIAmg---~~gt~vak~aAD----------------iv 785 (1053)
T TIGR01523 733 -TKVKMIEALHRR-K----AFCAMTGDGVN-D-SPSLKMANVGIAMG---INGSDVAKDASD----------------IV 785 (1053)
T ss_pred -HHHHHHHHHHhc-C----CeeEEeCCCcc-h-HHHHHhCCccEecC---CCccHHHHHhcC----------------EE
Confidence 588888888764 2 34555799999 9 99999999999997 246777789999 55
Q ss_pred ccccChhHHHHHHH
Q 001705 1006 EESYEPQDLSAALK 1019 (1024)
Q Consensus 1006 t~~~~~dgI~~aL~ 1019 (1024)
-.+.+-..|..+++
T Consensus 786 l~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 786 LSDDNFASILNAIE 799 (1053)
T ss_pred EecCCHHHHHHHHH
Confidence 44445556666654
No 217
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.0095 Score=65.15 Aligned_cols=197 Identities=12% Similarity=0.049 Sum_probs=105.1
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEEC---CCCHHHHHHHHHh-cCCCCCCCCEEEecCCceEE
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT---GSSLGETMEAIRR-CTVNIEDFDAIVCNSGSELY 826 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaT---GR~~~~~~~~l~~-~~i~~~~~d~lI~~nGa~I~ 826 (1024)
.+.+|+|||+.+. .+.-+...++|+.|+++ |+.+++.| .|+...+..-|.. .+++ ..++.++++.=+...
T Consensus 10 ~~l~DlDGvl~~G-~~~ipga~e~l~~L~~~----g~~~iflTNn~~~s~~~~~~~L~~~~~~~-~~~~~i~TS~~at~~ 83 (269)
T COG0647 10 GFLFDLDGVLYRG-NEAIPGAAEALKRLKAA----GKPVIFLTNNSTRSREVVAARLSSLGGVD-VTPDDIVTSGDATAD 83 (269)
T ss_pred EEEEcCcCceEeC-CccCchHHHHHHHHHHc----CCeEEEEeCCCCCCHHHHHHHHHhhcCCC-CCHHHeecHHHHHHH
Confidence 4459999997765 45567888999999998 89888876 5566667777887 4443 345555553222111
Q ss_pred cCCCccccCcchhhhhcccCCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCC
Q 001705 827 FPWRDMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGF 906 (1024)
Q Consensus 827 ~~~~~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~ 906 (1024)
+-......... +....+.+...+...... ..........-++....+... ..+.+.+.+.....
T Consensus 84 ~l~~~~~~~kv------~viG~~~l~~~l~~~G~~-------~~~~~~~~~~d~Vv~g~d~~~---~~e~l~~a~~~i~~ 147 (269)
T COG0647 84 YLAKQKPGKKV------YVIGEEGLKEELEGAGFE-------LVDEEEPARVDAVVVGLDRTL---TYEKLAEALLAIAA 147 (269)
T ss_pred HHHhhCCCCEE------EEECCcchHHHHHhCCcE-------EeccCCCCcccEEEEecCCCC---CHHHHHHHHHHHHc
Confidence 10000000011 112234455555443321 111111111223333323222 22334433332222
Q ss_pred eEEEEEecCCeE---------------------EEEecCCCCHHHH--HHHHHHHhCCCCCCEEEEeCCCCCCChHHhhc
Q 001705 907 RCNLVYTRAGSR---------------------LNVVPSFASRIQA--LRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLV 963 (1024)
Q Consensus 907 ~~~v~~s~~~~~---------------------lEI~p~gasKg~A--L~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~ 963 (1024)
.+.++.+++... -...|.-+.|-.. .+..++.++.+.++++++ ||+.+|| +.+=.
T Consensus 148 g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mV-GD~~~TD-I~~a~ 225 (269)
T COG0647 148 GAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMV-GDRLDTD-ILGAK 225 (269)
T ss_pred CCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEE-cCCchhh-HHHHH
Confidence 244444443211 1233445566444 566778899999999995 9999999 88888
Q ss_pred CCCceEEe
Q 001705 964 GLHKTLIL 971 (1024)
Q Consensus 964 ~ag~gVaM 971 (1024)
.+|..-++
T Consensus 226 ~~G~~t~L 233 (269)
T COG0647 226 AAGLDTLL 233 (269)
T ss_pred HcCCCEEE
Confidence 88875443
No 218
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.58 E-value=0.014 Score=60.45 Aligned_cols=43 Identities=12% Similarity=0.020 Sum_probs=33.6
Q ss_pred ecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 922 VPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 922 ~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.+.+..|+..++.+...+ +++++++ ||+.| | ++|.+.++.-+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~---~~~~i~i-GD~~~-D-~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK---YQHIIYI-GDGVT-D-VCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhc---CceEEEE-CCCcc-h-hchHhcCCcccc
Confidence 356678999999988765 5778775 99999 9 999888765443
No 219
>PLN02645 phosphoglycolate phosphatase
Probab=96.58 E-value=0.0032 Score=71.18 Aligned_cols=64 Identities=11% Similarity=0.091 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCC---HHHHHHHHHhcCCCCCCCCEEEec
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSS---LGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~---~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
++++|+||||.+.++ +.+...++|++|+++ |+.|+++|+|+ ...+.+-|..+|++ ..++-++++
T Consensus 30 ~~~~D~DGtl~~~~~-~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~-~~~~~I~ts 96 (311)
T PLN02645 30 TFIFDCDGVIWKGDK-LIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLN-VTEEEIFSS 96 (311)
T ss_pred EEEEeCcCCeEeCCc-cCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCC-CChhhEeeh
Confidence 566999999887654 557889999999998 99999999999 45555556788886 345555554
No 220
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.57 E-value=0.24 Score=59.81 Aligned_cols=152 Identities=13% Similarity=0.147 Sum_probs=85.5
Q ss_pred hhhhCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHh--hccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcC
Q 001705 469 MRFFTNPHKPTI-LALS-RPDP-KKNVTTLLKAFG--ECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD 543 (1024)
Q Consensus 469 ~~~~~~~~~~~I-l~vg-Rld~-~Kgi~~ll~A~~--~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~ 543 (1024)
.++..++++++| +..| |-.. ++.++.+++|+. .+. + ++.+++...+. ...+.+.+.++..+
T Consensus 405 ~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~--~l~fvvp~a~~---------~~~~~i~~~~~~~~ 470 (608)
T PRK01021 405 EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---S--THQLLVSSANP---------KYDHLILEVLQQEG 470 (608)
T ss_pred HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---c--CeEEEEecCch---------hhHHHHHHHHhhcC
Confidence 344444566654 3333 4333 567788889987 552 2 35565543221 11233444444333
Q ss_pred CCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc-CCCCchh----------------
Q 001705 544 LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT-KNGGPVD---------------- 606 (1024)
Q Consensus 544 l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat-~~Gg~~e---------------- 606 (1024)
.. .+.+.. .++-.+++++| |+++..| |.+.+|++.+|+|+|.. +.+...-
T Consensus 471 ~~-~~~ii~---~~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsL 537 (608)
T PRK01021 471 CL-HSHIVP---SQFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSL 537 (608)
T ss_pred CC-CeEEec---CcchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeeh
Confidence 11 122211 11246899999 9999876 99999999999999874 3332221
Q ss_pred --hhccCC--cEEE--eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 607 --ILKALN--NGLL--VDPHDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 607 --ii~~~~--~Gll--v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
++.+.. .-++ =+.-+++.+++++ +++.|++.++++.+...+
T Consensus 538 pNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 538 PNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred hHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 121110 1122 1344789999996 888898876666554443
No 221
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.56 E-value=0.01 Score=73.22 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=44.1
Q ss_pred cceeEEEEEecCCCCC---CCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 746 RQMLIVIAADCYDSDG---NTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~---~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..+.+.++.| ++++ .=...+-+..++++++|++. |+++++.||=+...+..+.+++|+
T Consensus 424 G~~~l~va~~--~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 424 GGTPLVVAED--NRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CCcEEEEEEC--CeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 3455666654 4411 11124668899999999998 999999999999999999999887
No 222
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.56 E-value=0.0073 Score=76.21 Aligned_cols=60 Identities=7% Similarity=0.051 Sum_probs=44.9
Q ss_pred cceeEEEEEecCCC-CCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 746 RQMLIVIAADCYDS-DGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 746 ~~rlllIa~DlDGT-l~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..+.+.++.|..-. +..-...+-+..+++|++|++. |+.+++.||.+...+..+.+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 34566666653222 1111235668899999999987 999999999999999999999876
No 223
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.56 E-value=2.6 Score=50.10 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=59.2
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVDP- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~p- 619 (1024)
+++.+.++.|+.+ ++... ..++||. -+-.++++||+++|+|+|+-..-+= ...+.+ ...|+-+..
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~--~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNK--AIGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCC--ccceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779988764 55555 1135552 2335789999999999999764332 223332 256776642
Q ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001705 620 -----HDQNAIADALLKLLADKNMWSECRKNGLK 648 (1024)
Q Consensus 620 -----~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 648 (1024)
-+.+++++++.+++.+++ .+++++++++
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGK 420 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHH
Confidence 167999999999997643 3445554444
No 224
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.42 E-value=0.039 Score=62.18 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=68.5
Q ss_pred CCCCcEEEEEeCCCCCC--CHH---HHHHHHhhccccCCCCcEEE-EEecCCCcccccccchHHHHHHHHHHHHcCCCCC
Q 001705 474 NPHKPTILALSRPDPKK--NVT---TLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQ 547 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~~K--gi~---~ll~A~~~l~~l~~~~~l~L-IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~ 547 (1024)
.+...+.+.+|.....- +-+ .+++.+..+. .... ..+ |..++. +..+....+.+..+ -.+.
T Consensus 144 l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~--~~~~-~~~~vttSRR-------Tp~~~~~~L~~~~~---~~~~ 210 (311)
T PF06258_consen 144 LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALA--AAYG-GSLLVTTSRR-------TPPEAEAALRELLK---DNPG 210 (311)
T ss_pred CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHH--HhCC-CeEEEEcCCC-------CcHHHHHHHHHhhc---CCCc
Confidence 35556677888755332 233 4555555553 2223 333 444442 33445555555544 2346
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG 603 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg 603 (1024)
+.+...-+.+-+.+++..| |.+++|.-.-.| +-||+++|+||..-...+
T Consensus 211 ~~~~~~~~~nPy~~~La~a----d~i~VT~DSvSM---vsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 211 VYIWDGTGENPYLGFLAAA----DAIVVTEDSVSM---VSEAAATGKPVYVLPLPG 259 (311)
T ss_pred eEEecCCCCCcHHHHHHhC----CEEEEcCccHHH---HHHHHHcCCCEEEecCCC
Confidence 6555665667799999999 999998654444 789999999998877655
No 225
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.41 E-value=0.027 Score=73.24 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=84.8
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhccc
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYR 845 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~ 845 (1024)
.+-+.++++++++++. |+++++.||-+...+..+.+++|+.. .+ ..+..+
T Consensus 579 plr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~~--~~-------~~vi~G----------------- 628 (941)
T TIGR01517 579 PLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGILT--FG-------GLAMEG----------------- 628 (941)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCCC--CC-------ceEeeH-----------------
Confidence 4668899999999997 99999999999999999999999831 11 111110
Q ss_pred CCchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCC
Q 001705 846 WPGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSF 925 (1024)
Q Consensus 846 w~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~g 925 (1024)
+.+. .+ . -+++.+.+.. +. + +-.+.|.
T Consensus 629 ---~~~~----~l---------------------------~-------~~el~~~i~~----~~-V------far~sPe- 655 (941)
T TIGR01517 629 ---KEFR----RL---------------------------V-------YEEMDPILPK----LR-V------LARSSPL- 655 (941)
T ss_pred ---HHhh----hC---------------------------C-------HHHHHHHhcc----Ce-E------EEECCHH-
Confidence 0000 00 0 0122222221 11 1 2233343
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.+. | ++++++||+-| | .++|+.|+.||||| .+|.+-.+++||
T Consensus 656 -~K~~iV~~lq~~-g----~vVam~GDGvN-D-apALk~AdVGIAmg---~~gtdvAk~aAD 706 (941)
T TIGR01517 656 -DKQLLVLMLKDM-G----EVVAVTGDGTN-D-APALKLADVGFSMG---ISGTEVAKEASD 706 (941)
T ss_pred -HHHHHHHHHHHC-C----CEEEEECCCCc-h-HHHHHhCCcceecC---CCccHHHHHhCC
Confidence 588888877653 2 36677899999 9 99999999999998 135666788888
No 226
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.39 E-value=0.02 Score=63.36 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=42.8
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhc-ccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLH-GED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~-~ad 987 (1024)
.|..++.+++++++++++++++| ||+.+ | +.+-+.+|..++.-+-.-+..+++.. .++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~I-GDs~~-D-i~aA~~AG~~~I~v~~g~~~~~~l~~~~ad 254 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMYV-GDETR-D-VEAARQVGLIAVAVTWGFNDRQSLVAACPD 254 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEEE-CCCHH-H-HHHHHHCCCeEEEEecCCCCHHHHHHCCCC
Confidence 47789999999999999999996 99999 9 99988899765533221234444543 345
No 227
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.39 E-value=0.012 Score=63.45 Aligned_cols=40 Identities=15% Similarity=0.069 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
+...+.++++++|++++++++| ||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~I-GDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYV-GDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEe-CCCHH-H-HHHHHHCCCcEE
Confidence 4567999999999999999997 99999 9 999999997654
No 228
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.35 E-value=0.033 Score=68.18 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=103.7
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHHHhhcccc---CCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 474 NPHKPTILALSRPDPKKNVTTLLKAFGECQPL---RELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l---~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
+|+..+++++-|+...|.....+.-...+... ...|.+.+|.|+...... ......+..|+..++..+...+|.|
T Consensus 484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y--~~aK~iIk~I~~~a~~in~~lkVvF 561 (750)
T COG0058 484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPAD--YAAKEIIKLINDVADVINNKLKVVF 561 (750)
T ss_pred CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcc--hHHHHHHHHHHHHHHhhcccceEEE
Confidence 57788999999999999776655433333211 234667756555433222 1234677888888888877778999
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhc--cCCcEEEeC
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILK--ALNNGLLVD 618 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~--~~~~Gllv~ 618 (1024)
+...+-+--.-++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|..|+..|+.+ .+.||+++-
T Consensus 562 l~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 562 LPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred eCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 8887655555566666 99998876 5999999999999999999999999999997 789999995
No 229
>PLN02210 UDP-glucosyl transferase
Probab=96.34 E-value=3.6 Score=49.19 Aligned_cols=136 Identities=14% Similarity=0.192 Sum_probs=76.4
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDP--KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~--~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
...+.+++|.... .+-+..+..+++... ..+..+++.....+ . ...+.+... .++..+.++
T Consensus 269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~~-----~~flw~~~~~~~~~-----~---~~~~~~~~~----~~~g~v~~w 331 (456)
T PLN02210 269 SSVVYISFGSMLESLENQVETIAKALKNRG-----VPFLWVIRPKEKAQ-----N---VQVLQEMVK----EGQGVVLEW 331 (456)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHhCC-----CCEEEEEeCCcccc-----c---hhhHHhhcc----CCCeEEEec
Confidence 3567788887643 233555556665442 24434554311100 0 111112211 123344588
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeCC------CCH
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVDP------HDQ 622 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~p------~d~ 622 (1024)
.|+. +++..++ .++||.- -|+ .+++|++++|+|+|+-...+= ...+.+ .+.|+.++. -+.
T Consensus 332 ~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 332 SPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred CCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 8776 4666661 2355532 233 578899999999999764432 223333 567877742 368
Q ss_pred HHHHHHHHHHHhCHH
Q 001705 623 NAIADALLKLLADKN 637 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~ 637 (1024)
+++++++++++.+++
T Consensus 403 ~~l~~av~~~m~~~~ 417 (456)
T PLN02210 403 EEVERCIEAVTEGPA 417 (456)
T ss_pred HHHHHHHHHHhcCch
Confidence 899999999997643
No 230
>PRK08238 hypothetical protein; Validated
Probab=96.32 E-value=0.023 Score=67.67 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=28.4
Q ss_pred CEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhccccc
Q 001705 945 KMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDA 988 (1024)
Q Consensus 945 ~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~ 988 (1024)
+++. +||+.+ | ++|++.++..++++ .++.+.+.|+.
T Consensus 141 ~~~y-vGDS~~-D-lp~~~~A~~av~Vn-----~~~~l~~~a~~ 176 (479)
T PRK08238 141 GFDY-AGNSAA-D-LPVWAAARRAIVVG-----ASPGVARAARA 176 (479)
T ss_pred CeeE-ecCCHH-H-HHHHHhCCCeEEEC-----CCHHHHHHHHH
Confidence 3445 499999 9 99999999999998 45557766663
No 231
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.30 E-value=0.016 Score=71.57 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=104.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHHHc----
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKY---- 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~---- 542 (1024)
.+|+..+++++-|+...|.... ++..+.++..+...| ..++|.|+...... ......+..|...++..
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY--HMAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998877 666655554444443 34555544322111 11234555666665442
Q ss_pred CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 543 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 543 ~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|..|+..|+.++ .+|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 2444 68888776555556666667 99998876 59999999999999999999999999999977 789999
Q ss_pred eCCCCHHHHHHH
Q 001705 617 VDPHDQNAIADA 628 (1024)
Q Consensus 617 v~p~d~~~la~a 628 (1024)
|- .+.+++.+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 94 466665543
No 232
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.28 E-value=0.016 Score=71.57 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+-++.++++++|++. |+++++.||-+...+..+.+++|+
T Consensus 441 p~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 441 VIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred CCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 4668899999999998 999999999999999999999887
No 233
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.17 E-value=0.033 Score=71.89 Aligned_cols=129 Identities=15% Similarity=0.303 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhcccC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRW 846 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~w 846 (1024)
+-++++++|+.+++. ||++..+||-+...+..+.+++|+.. +.+.-++-.|+++-.
T Consensus 548 pr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~~-~~~~~~vi~G~el~~------------------- 603 (917)
T COG0474 548 PREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIEA-EAESALVIDGAELDA------------------- 603 (917)
T ss_pred CCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCCC-CCCceeEeehHHhhh-------------------
Confidence 447888999999998 99999999999999999999988742 000000101111100
Q ss_pred CchhHHHHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCC
Q 001705 847 PGENVRSVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFA 926 (1024)
Q Consensus 847 ~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~ga 926 (1024)
. . + +++.+.+... . + |--+.|.
T Consensus 604 -------l----~--------------------------~--------~el~~~~~~~----~-V------fARvsP~-- 625 (917)
T COG0474 604 -------L----S--------------------------D--------EELAELVEEL----S-V------FARVSPE-- 625 (917)
T ss_pred -------c----C--------------------------H--------HHHHHHhhhC----c-E------EEEcCHH--
Confidence 0 0 0 0222222211 1 1 1122221
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|..-++.|.++ | +++++.||+-| | .+||+.|+.||+|++ +|.+-.|++||
T Consensus 626 qK~~IV~~lq~~-g----~vVamtGDGvN-D-apALk~ADVGIamg~---~Gtdaak~Aad 676 (917)
T COG0474 626 QKARIVEALQKS-G----HVVAMTGDGVN-D-APALKAADVGIAMGG---EGTDAAKEAAD 676 (917)
T ss_pred HHHHHHHHHHhC-C----CEEEEeCCCch-h-HHHHHhcCccEEecc---cHHHHHHhhcc
Confidence 477777776654 3 46777899999 9 999999999999992 58888889988
No 234
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.12 E-value=4.7 Score=48.53 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=53.2
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----ch-hhhccCCcEEEeCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PV-DILKALNNGLLVDP- 619 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~-eii~~~~~Gllv~p- 619 (1024)
+++.+.++.|+.+ +++.. ..++||. .-| -.+++||+.+|+|+|+-...+ .. .+++..+.|+.++.
T Consensus 342 ~~g~v~~W~PQ~~---iL~H~--~v~~Fvt---H~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIGWAPQVA---VLAKP--AIGGFVT---HCG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEeeCCHHH---HhCCc--ccCcccc---cCc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 4556668888764 44332 1145552 123 358899999999999976432 12 33444566777641
Q ss_pred ------------CCHHHHHHHHHHHHh-CHH
Q 001705 620 ------------HDQNAIADALLKLLA-DKN 637 (1024)
Q Consensus 620 ------------~d~~~la~aI~~ll~-d~~ 637 (1024)
-+.++++++|.+++. +++
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 268899999999996 543
No 235
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.09 E-value=0.021 Score=69.63 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=37.4
Q ss_pred hhhHHHHHHHHHHHhhccCCCCe-EEEEECCCCHHHHHHHHHhcCC
Q 001705 765 ETFQATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 765 ~~i~~~~~~~l~~l~~~~~~~gi-~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..+-+..+++|++|++. |+ .++++||.+...+..+++.+|+
T Consensus 361 d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 361 DEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred ccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 45778999999999988 99 9999999999999999999776
No 236
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.01 E-value=0.026 Score=60.37 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+...++.+++++|++++++++| ||+.+ | +++-+.+|..++.-
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~i-gDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVAL-EDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEE-cCChh-h-HHHHHHcCCEEEEe
Confidence 45678999999999999999996 99999 9 99999999776555
No 237
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=95.98 E-value=0.012 Score=62.07 Aligned_cols=55 Identities=13% Similarity=0.244 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccCC
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFK 990 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~ 990 (1024)
..-.|...++.+. ..+. +++++ ||+.| | ++|++.+|.+|+|. |.|.+++.|+..+
T Consensus 129 ~~~~K~~~l~~l~-~~~~---~~v~v-GDs~n-D-l~ml~~Ag~~ia~~-----ak~~~~~~~~~~~ 183 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SLYY---RVIAA-GDSYN-D-TTMLSEAHAGILFH-----APENVIREFPQFP 183 (203)
T ss_pred CcchHHHHHHHHH-hhCC---CEEEE-eCCHH-H-HHHHHhCCCCEEec-----CCHHHHHhCCCCC
Confidence 3457999999884 5554 58885 99999 9 99999999999998 9999999999533
No 238
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.96 E-value=0.031 Score=73.47 Aligned_cols=41 Identities=17% Similarity=0.357 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
.+.+.++++|+++++. ||+++++||.+...+..+.+++||-
T Consensus 656 ~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 4668899999999997 9999999999999999999999983
No 239
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.87 E-value=0.011 Score=57.80 Aligned_cols=55 Identities=11% Similarity=0.144 Sum_probs=45.3
Q ss_pred EEEecCCCCCCC--------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCC--------HHHHHHHHHhcCCC
Q 001705 752 IAADCYDSDGNT--------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSS--------LGETMEAIRRCTVN 810 (1024)
Q Consensus 752 Ia~DlDGTl~~~--------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~--------~~~~~~~l~~~~i~ 810 (1024)
+++|+||||.+. ...+.+.+.++|++|+++ |+.++|+|+++ ...+..+++.+++.
T Consensus 3 ~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 3 VVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred EEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 459999997741 234568889999999987 99999999999 77888999998773
No 240
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=95.86 E-value=0.0078 Score=64.18 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|...++.+++++++++++++++ ||+.+ | ++|++.+|.+++|+ +.+.+++.|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~i-GDs~~-D-i~aa~~ag~~i~~~-----~~~~~~~~a~ 204 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAV-GDGAN-D-LSMIKAAGLGIAFN-----AKPKLQQKAD 204 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEE-ECCHH-H-HHHHHhCCCeEEeC-----CCHHHHHhch
Confidence 48999999999999999999996 99999 9 99999999999986 6778888888
No 241
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.83 E-value=0.011 Score=55.07 Aligned_cols=54 Identities=11% Similarity=-0.002 Sum_probs=42.2
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECC---CCHHHHHHHHHhcCCC
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTG---SSLGETMEAIRRCTVN 810 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTG---R~~~~~~~~l~~~~i~ 810 (1024)
+.+|+||||.+. ..+.+...++|++|++. |..|++.|- |+.......|+.+|++
T Consensus 1 ~l~D~dGvl~~g-~~~ipga~e~l~~L~~~----g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG-NEPIPGAVEALDALRER----GKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET-TEE-TTHHHHHHHHHHT----TSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC-CCcCcCHHHHHHHHHHc----CCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 358999997775 45677889999999998 888888874 5666777788888886
No 242
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=95.82 E-value=0.0071 Score=63.35 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
-+|+.+++.+++++|+++++++++ ||+.+ | ++|++.+|.++|+. +.+.+.+.|.
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~i-GDs~~-D-~~~a~~ag~~~a~~-----~~~~~~~~a~ 199 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAV-GDSKN-D-LPMFEVADISISLG-----DEGHADYLAK 199 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEE-cCCHh-H-HHHHHhcCCeEEEC-----CCccchhhcc
Confidence 469999999999999999999996 99999 9 99999999999997 3444554443
No 243
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.69 E-value=0.015 Score=59.36 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=45.1
Q ss_pred EEEEecCCCCCCCch-h-----------hHHHHHHHHHHHhhccCCCCeEEEEECCCCH------------HHHHHHHHh
Q 001705 751 VIAADCYDSDGNTTE-T-----------FQATIKNVMKAAGLSLGLGRVGFILVTGSSL------------GETMEAIRR 806 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~-~-----------i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~------------~~~~~~l~~ 806 (1024)
++++|+||||....+ . +-+.+.++|++|+++ |+.++|+|..+. ..+..+++.
T Consensus 15 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 15 VAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred EEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 345899999665322 1 126788999999987 999999996543 246778899
Q ss_pred cCCCCCCCCEEEecC
Q 001705 807 CTVNIEDFDAIVCNS 821 (1024)
Q Consensus 807 ~~i~~~~~d~lI~~n 821 (1024)
+|+. ++.+|+.+
T Consensus 91 ~gl~---~~~ii~~~ 102 (166)
T TIGR01664 91 LKVP---IQVLAATH 102 (166)
T ss_pred cCCC---EEEEEecC
Confidence 8884 34555544
No 244
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=95.60 E-value=0.069 Score=53.51 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=43.2
Q ss_pred cceEEEEcCC-ChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCC
Q 001705 304 WPYVIHGHYA-DAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTST 382 (1024)
Q Consensus 304 ~pDvIh~h~~-~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S 382 (1024)
.+|+|.+.+. +...+-.+.....++|.++.+|.-. +......+.. ++.. |.+... ...-.||.|++.|
T Consensus 59 ~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQ---l~YP~~~~~~-rd~~--~~~~ni-----~saLaAD~v~FNS 127 (168)
T PF12038_consen 59 SYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQ---LAYPVSPGQE-RDFQ--YGMNNI-----YSALAADRVVFNS 127 (168)
T ss_pred CCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCc---ccCCCCCCcc-cccc--HHHHHH-----HHHHhceeeeecc
Confidence 5799998875 5555555555556899999999631 1111111111 1222 222221 1234899999999
Q ss_pred HHHHHH
Q 001705 383 RQEIEM 388 (1024)
Q Consensus 383 ~~~~~~ 388 (1024)
...++.
T Consensus 128 ~~nr~s 133 (168)
T PF12038_consen 128 AFNRDS 133 (168)
T ss_pred hhhHHH
Confidence 877665
No 245
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=95.59 E-value=0.011 Score=62.73 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
+...+..+++++|++++++++| ||+.+ | +.+-+.+|..++.
T Consensus 143 ~p~~~~~~~~~~~~~~~~~~~i-gDs~~-d-~~aa~~aG~~~i~ 183 (213)
T TIGR01449 143 HPDPLLLAAERLGVAPQQMVYV-GDSRV-D-IQAARAAGCPSVL 183 (213)
T ss_pred ChHHHHHHHHHcCCChhHeEEe-CCCHH-H-HHHHHHCCCeEEE
Confidence 4678999999999999999996 99999 9 9999999976653
No 246
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.57 E-value=0.04 Score=59.53 Aligned_cols=36 Identities=8% Similarity=0.113 Sum_probs=30.8
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCC----CHHHHHHHHHhcCCC
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGS----SLGETMEAIRRCTVN 810 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR----~~~~~~~~l~~~~i~ 810 (1024)
.+++|+.++++ |+.++++|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 67888889887 9999999999 556788888888884
No 247
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=95.48 E-value=0.076 Score=56.42 Aligned_cols=44 Identities=7% Similarity=-0.080 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
..-.|...++++++++|++++++++| ||+.+ | +.+-+.+|..++
T Consensus 136 ~~Kp~p~~~~~~~~~~~~~~~~~~~i-GDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 136 HAKPDPEPVLKALELLGAKPEEALMV-GDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCcHHHHHHHHHcCCCHHHEEEE-CCCHH-H-HHHHHHCCCeEE
Confidence 34457889999999999999999996 99999 9 999999997654
No 248
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=95.42 E-value=0.052 Score=66.50 Aligned_cols=100 Identities=16% Similarity=0.254 Sum_probs=68.9
Q ss_pred hhhHHHHHHHHHhcCCeEEEEEecCC-------------eEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCC
Q 001705 891 TRKVDNIRQRLRMRGFRCNLVYTRAG-------------SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTD 957 (1024)
Q Consensus 891 ~~~~~el~~~L~~~~~~~~v~~s~~~-------------~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D 957 (1024)
.+.+.+.-+.|+..+..+.++.+.+. .+-++.| -.|...++.+.. +.+++++ +||+.| |
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~~~~~~~p--~~K~~~v~~l~~----~~~~v~~-VGDg~n-D 478 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGINVRAEVLP--DDKAALIKELQE----KGRVVAM-VGDGIN-D 478 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcEEccCCh--HHHHHHHHHHHH----cCCEEEE-EeCCCc-c
Confidence 34456666777777766654433221 1233434 268777777765 3456766 599999 9
Q ss_pred hHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHH
Q 001705 958 YEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 958 ~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~ 1019 (1024)
.+|++.++.||+|| ++.+..+..|| ++..+.+-++|..+++
T Consensus 479 -~~al~~A~vgia~g----~g~~~a~~~Ad----------------vvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 479 -APALAQADVGIAIG----AGTDVAIEAAD----------------VVLMRNDLNDVATAID 519 (562)
T ss_pred -HHHHhhCCEEEEeC----CcCHHHHhhCC----------------EEEeCCCHHHHHHHHH
Confidence 99999999999999 88877788888 6655556677776653
No 249
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=95.42 E-value=0.095 Score=63.91 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=87.2
Q ss_pred HHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecCCceEEcCCCccccCcchhhhhcccCCchhHH
Q 001705 773 NVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNSGSELYFPWRDMVADGDYEAHVEYRWPGENVR 852 (1024)
Q Consensus 773 ~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~nGa~I~~~~~~~~~d~~~~~~i~~~w~~~~v~ 852 (1024)
+++.+.++. ||+++..||+....++.+.++.|| |. -|+++. +
T Consensus 597 ~Av~~CrsA----GIkvimVTgdhpiTAkAiA~~vgI--------i~-~~~et~-------------------------e 638 (1019)
T KOG0203|consen 597 DAVGKCRSA----GIKVIMVTGDHPITAKAIAKSVGI--------IS-EGSETV-------------------------E 638 (1019)
T ss_pred hhhhhhhhh----CceEEEEecCccchhhhhhhheee--------ec-CCchhh-------------------------h
Confidence 777888887 999999999999999999998664 12 122111 1
Q ss_pred HHHhhhhhccCCCCcccccccCCCCceEEEEEecCCCchhhHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHH
Q 001705 853 SVVPRVARAEDGAEDDIVGFVDASSSRCQSYSIKPGAETRKVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQAL 932 (1024)
Q Consensus 853 ~~l~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL 932 (1024)
.+..+.... ..+........++. + ..+...-.-+++.+.|..+. ..-...+.+...+=|+-
T Consensus 639 ~~a~r~~~~-------v~~vn~~~a~a~Vi-h-G~eL~~~~~~qld~il~nh~-eIVFARTSPqQKLiIVe--------- 699 (1019)
T KOG0203|consen 639 DIAKRLNIP-------VEQVNSRDAKAAVI-H-GSELPDMSSEQLDELLQNHQ-EIVFARTSPQQKLIIVE--------- 699 (1019)
T ss_pred hhHHhcCCc-------ccccCccccceEEE-e-cccccccCHHHHHHHHHhCC-ceEEEecCccceEEeEh---------
Confidence 111111110 00000011122222 2 22222223456666666542 23333444443555543
Q ss_pred HHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCC-hHHHhcccccCCCCC
Q 001705 933 RYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYG-SEKLLHGEDAFKRED 993 (1024)
Q Consensus 933 ~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA-~~elk~~ad~~~~~~ 993 (1024)
=|++.|- +|+..||+-| | -+-|+.++.||||| =| ++--|++||=.-++|
T Consensus 700 --~cQr~Ga----iVaVTGDGVN-D-sPALKKADIGVAMG----iaGSDvsKqAADmILLDD 749 (1019)
T KOG0203|consen 700 --GCQRQGA----IVAVTGDGVN-D-SPALKKADIGVAMG----IAGSDVSKQAADMILLDD 749 (1019)
T ss_pred --hhhhcCc----EEEEeCCCcC-C-Chhhcccccceeec----cccchHHHhhcceEEecC
Confidence 2666664 6776799999 9 99999999999998 44 444478888444433
No 250
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.41 E-value=0.053 Score=67.29 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=105.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHH----Hc
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLID----KY 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~----~~ 542 (1024)
.+|+..+++++-|+...|.... ++..+.++..+...| ..++|.|+...... ......+..|...++ ..
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY--YMAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998887 776655554444443 35565544322111 123456667777766 23
Q ss_pred CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 543 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 543 ~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
.+.+ +|.|+.-..-+--..++..| ||-.+.|. .|..|..=+-+|.-|.+.++|..|+..|+.++ +.||+.
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3444 68888776555555666666 99999887 59999999999999999999999999999986 789999
Q ss_pred eCCCCHHHHHH
Q 001705 617 VDPHDQNAIAD 627 (1024)
Q Consensus 617 v~p~d~~~la~ 627 (1024)
+- .+.+++.+
T Consensus 693 fG-~~~~ev~~ 702 (815)
T PRK14986 693 FG-NTAEEVEA 702 (815)
T ss_pred eC-CCHHHHHH
Confidence 95 35655544
No 251
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.17 E-value=0.071 Score=47.39 Aligned_cols=71 Identities=18% Similarity=0.188 Sum_probs=45.1
Q ss_pred CCCeEEEEecCCCCCCccccccCCcchHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--hHHHHHHHHccC
Q 001705 249 SCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYAD--AGEVAAHLSGAL 326 (1024)
Q Consensus 249 ~~gv~i~rip~~~~~~~~~k~~lwp~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~--~~~~a~~l~~~~ 326 (1024)
.+|.+++.+|..+. .+....|-+-.+.. .++ ..+.+ .+.||||+|... .+.-+.+.++.+
T Consensus 13 tngLKVYYlP~~~~----~~~~t~Pt~~~~~p----l~R---~Ilir-------E~I~IVHgH~a~S~l~hE~i~hA~~m 74 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF----YNQCTLPTLFGSFP----LLR---NILIR-------ERIDIVHGHQAFSTLCHEAILHARTM 74 (90)
T ss_pred CCCeEEEeecchhh----hcCcchHHHHHhhH----HHH---HHHHH-------cCeeEEEeehhhhHHHHHHHHHHHhC
Confidence 45999999997553 23333343222111 111 11111 378999999873 455577778889
Q ss_pred CCCEEEEeCCC
Q 001705 327 NVPMVLTGHSL 337 (1024)
Q Consensus 327 ~ipiV~t~H~l 337 (1024)
|++.|||-||+
T Consensus 75 GlktVfTDHSL 85 (90)
T PF08288_consen 75 GLKTVFTDHSL 85 (90)
T ss_pred CCcEEeecccc
Confidence 99999999987
No 252
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.09 E-value=0.25 Score=53.88 Aligned_cols=41 Identities=7% Similarity=-0.043 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
-+...+.+.++++|++++++++| ||+.. | +..=+.+|..++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~v-gDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFVF-EDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEEE-cCCHH-H-HHHHHHCCCEEE
Confidence 34567899999999999999996 99999 9 888888887654
No 253
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.06 E-value=0.093 Score=65.15 Aligned_cols=98 Identities=15% Similarity=0.260 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHhcCCeEEEEEecCC---------------eEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCC
Q 001705 892 RKVDNIRQRLRMRGFRCNLVYTRAG---------------SRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDT 956 (1024)
Q Consensus 892 ~~~~el~~~L~~~~~~~~v~~s~~~---------------~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~ 956 (1024)
+...+.-+.|+..+.+ .++.++++ .+=|++|. .|...++.|.++. +.++||||+-|
T Consensus 540 ~~a~~aI~~L~~~Gi~-~~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g-----~~VamVGDGIN- 610 (713)
T COG2217 540 PDAKEAIAALKALGIK-VVMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAEG-----RKVAMVGDGIN- 610 (713)
T ss_pred hhHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhcC-----CEEEEEeCCch-
Confidence 3455666778888877 44555543 24577775 5999999987533 46777899999
Q ss_pred ChHHhhcCCCceEEecCCCCCChHHHhcccccCCCCCccCCCCCCeeEeccccChhHHHHHHH
Q 001705 957 DYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAFKREDVVPPDSPNIAYIEESYEPQDLSAALK 1019 (1024)
Q Consensus 957 D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~~~~~v~~~~~~~~~~vt~~~~~dgI~~aL~ 1019 (1024)
| -+-|..+..||||| .+++-.+++|| .+--..+-..|..+++
T Consensus 611 D-APALA~AdVGiAmG----~GtDvA~eaAD----------------vvL~~~dL~~v~~ai~ 652 (713)
T COG2217 611 D-APALAAADVGIAMG----SGTDVAIEAAD----------------VVLMRDDLSAVPEAID 652 (713)
T ss_pred h-HHHHhhcCeeEeec----CCcHHHHHhCC----------------EEEecCCHHHHHHHHH
Confidence 9 99999999999999 89998899999 4444556667777664
No 254
>PLN02555 limonoid glucosyltransferase
Probab=95.06 E-value=11 Score=45.38 Aligned_cols=94 Identities=18% Similarity=0.237 Sum_probs=59.8
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhccCCcEEEeC--
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVD-ILKALNNGLLVD-- 618 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~e-ii~~~~~Gllv~-- 618 (1024)
+++.+.++.|+.+ ++... ..++||.- -| -.+++||+.+|+|+|+-..-+ ... +++..+.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~---iL~H~--~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEK---VLAHP--SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHH---HhCCC--ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 4666678888765 44332 11566632 23 468899999999999976433 122 223336677772
Q ss_pred ---C--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001705 619 ---P--HDQNAIADALLKLLADKNMWSECRKNGLKN 649 (1024)
Q Consensus 619 ---p--~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 649 (1024)
. -+.++++++|.+++.+++ .+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGEK-AAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCch-HHHHHHHHHHH
Confidence 1 257899999999997643 45666666553
No 255
>PLN00164 glucosyltransferase; Provisional
Probab=95.02 E-value=11 Score=45.34 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=57.6
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhccCCcEEEeCC---
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVD-ILKALNNGLLVDP--- 619 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~e-ii~~~~~Gllv~p--- 619 (1024)
+.+.++.|+. +++..++ .++||.- -|+ .+++||+++|+|+|+-..-+ ... +++..+.|+.++.
T Consensus 341 ~~v~~w~PQ~---~iL~h~~--vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQK---EILAHAA--VGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHH---HHhcCcc--cCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 5566787776 4555551 1345522 233 58899999999999965322 222 2334466877742
Q ss_pred ----CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Q 001705 620 ----HDQNAIADALLKLLADKN-MWSECRKNGLKN 649 (1024)
Q Consensus 620 ----~d~~~la~aI~~ll~d~~-~~~~~~~~~~~~ 649 (1024)
-+.++++++|.+++.+++ +.+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 257999999999997643 344555544443
No 256
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.93 E-value=0.79 Score=53.07 Aligned_cols=110 Identities=12% Similarity=0.215 Sum_probs=65.5
Q ss_pred CCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEc--CC-------CCchhhhccCCc
Q 001705 543 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT--KN-------GGPVDILKALNN 613 (1024)
Q Consensus 543 ~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat--~~-------Gg~~eii~~~~~ 613 (1024)
...++|.+... ..++.+++..| |++|- -++-++.|++.+++|||-. +. |...++ .....
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34467776555 34899999999 89873 3567899999999999954 22 333332 22345
Q ss_pred EEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 614 GLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
|-++. +.++|.++|..++.++...++.++...+..-.|.=...|++..+.+
T Consensus 317 g~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred CceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 66775 8999999999999877665555555555443344445566665554
No 257
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.85 E-value=0.069 Score=57.08 Aligned_cols=40 Identities=8% Similarity=-0.011 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH---HHHHHHhcCCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE---TMEAIRRCTVN 810 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~---~~~~l~~~~i~ 810 (1024)
..+.++++++.++++ |+.++++|||+... +...|...|++
T Consensus 121 aip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 121 ALPEGLKLYQKIIEL----GIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 346788899999987 99999999999766 77888888874
No 258
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.73 E-value=0.042 Score=59.72 Aligned_cols=64 Identities=9% Similarity=0.016 Sum_probs=47.5
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH--HHHHHHhcCCCCCCCCEEEe
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE--TMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~--~~~~l~~~~i~~~~~d~lI~ 819 (1024)
.+.+|+|||+.+. ..+.+...++|++|+++ |+.++++|..+... +.+.++.+|++...++.+++
T Consensus 10 ~~~~D~dG~l~~~-~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~ 75 (242)
T TIGR01459 10 VFLLDLWGVIIDG-NHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIIS 75 (242)
T ss_pred EEEEecccccccC-CccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEc
Confidence 4558999997765 34568999999999987 99999976655443 44788999986214666655
No 259
>PLN02167 UDP-glycosyltransferase family protein
Probab=94.69 E-value=13 Score=44.65 Aligned_cols=140 Identities=12% Similarity=0.172 Sum_probs=76.3
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+.++.+++|.+. ..+.+..++.+++.+. ..+..+++..... ........-..+.+.+ .++..+.++
T Consensus 280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~--~~~~~~~lp~~~~er~-----~~rg~v~~w 347 (475)
T PLN02167 280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAE--YASPYEPLPEGFMDRV-----MGRGLVCGW 347 (475)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCccc--ccchhhhCChHHHHHh-----ccCeeeecc
Confidence 346777888763 3345677777776662 2343455432110 0000000001111111 134455688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----h-hhhccCCcEEEeCC---------
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----V-DILKALNNGLLVDP--------- 619 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~-eii~~~~~Gllv~p--------- 619 (1024)
+|+. +++... ..++||.- -|+ .+++||+++|+|+|+-...+= . -++...+.|+.+..
T Consensus 348 ~PQ~---~iL~h~--~vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 418 (475)
T PLN02167 348 APQV---EILAHK--AIGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEI 418 (475)
T ss_pred CCHH---HHhcCc--ccCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCc
Confidence 7776 455554 12566632 233 478999999999998764332 1 12444466877642
Q ss_pred CCHHHHHHHHHHHHhCH
Q 001705 620 HDQNAIADALLKLLADK 636 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~ 636 (1024)
-+.++++++|.+++.++
T Consensus 419 ~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 419 VKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccHHHHHHHHHHHhcCC
Confidence 26889999999999754
No 260
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=94.67 E-value=0.14 Score=63.79 Aligned_cols=148 Identities=15% Similarity=0.142 Sum_probs=104.3
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHHH----c
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDK----Y 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~----~ 542 (1024)
.+|+..+++++-|+...|.... ++..+.++..+...| ..++|.|+-..... ......+..|...++. .
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY--YMAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc--HHHHHHHHHHHHHHHHhccCh
Confidence 3688899999999999998888 666655554444443 25565554332211 1223456666666663 2
Q ss_pred CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 543 DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 543 ~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
.+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|..|+..|+.+. .+|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 3444 68888776555555666666 99998876 59999999999999999999999999999977 789999
Q ss_pred eCCCCHHHHHH
Q 001705 617 VDPHDQNAIAD 627 (1024)
Q Consensus 617 v~p~d~~~la~ 627 (1024)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35555543
No 261
>PLN02534 UDP-glycosyltransferase
Probab=94.58 E-value=14 Score=44.49 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=55.6
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchh-----hhccCCcEEEeC---
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVD-----ILKALNNGLLVD--- 618 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~e-----ii~~~~~Gllv~--- 618 (1024)
.+.+.+++|+. +++...+ .+.||. -+-..+++||+++|+|+|+-...+-.- +++....|+-+.
T Consensus 345 g~~v~~w~pq~---~iL~h~~--v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~ 415 (491)
T PLN02534 345 GLLIKGWAPQV---LILSHPA--IGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEV 415 (491)
T ss_pred CeeccCCCCHH---HHhcCCc--cceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccc
Confidence 56677898885 4555551 123553 233478999999999999976533211 222333444431
Q ss_pred ------------CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001705 619 ------------PHDQNAIADALLKLLAD-KNMWSECRKNGLK 648 (1024)
Q Consensus 619 ------------p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 648 (1024)
--+.+++++++++++.+ .++-+++++++.+
T Consensus 416 ~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 416 PVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred cccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 02578999999999962 2223444444443
No 262
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.39 E-value=0.11 Score=51.97 Aligned_cols=52 Identities=8% Similarity=0.090 Sum_probs=41.2
Q ss_pred EEEecCCCCCCCch-----------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH---HHHHHHhc
Q 001705 752 IAADCYDSDGNTTE-----------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE---TMEAIRRC 807 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~-----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~---~~~~l~~~ 807 (1024)
|.+|+|||+..+|. ...+.+.++.++++++ |.+|+..|+|+... .+.||...
T Consensus 2 VvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred EEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 56999999665431 4567788999999988 99999999999764 56788876
No 263
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.19 E-value=0.38 Score=63.58 Aligned_cols=40 Identities=10% Similarity=0.261 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
++.+.+.++|+.|++. ||++.+.||=....+..+..+.|+
T Consensus 631 ~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 631 KLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 4667888999999987 999999999999999999999887
No 264
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=94.18 E-value=0.44 Score=50.64 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCce-EEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKT-LILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~g-VaMg 972 (1024)
+......+++++|+++++++++ ||+. + | +..=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~i-gDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVMV-GDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEEE-CCChHH-H-HHHHHHCCCEEEEEC
Confidence 4568899999999999999996 9997 8 9 8888888874 4444
No 265
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=94.17 E-value=0.047 Score=56.60 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+.+.|+.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 5566888888887 9999999999999999999998874
No 266
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=94.12 E-value=0.042 Score=57.67 Aligned_cols=48 Identities=21% Similarity=0.195 Sum_probs=43.4
Q ss_pred ecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 922 VPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 922 ~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
...+-.|..+++.++++.++++++++++ ||+.+ | ++|++.+|.++++.
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~~-gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYAY-GDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEee-eCCcc-c-HHHHHhCCCcEEeC
Confidence 3456679999999999999999999997 99999 9 99999999999886
No 267
>PLN03015 UDP-glucosyl transferase
Probab=93.81 E-value=19 Score=43.07 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=56.3
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-ccCCcEEEeC----
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDIL-KALNNGLLVD---- 618 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii-~~~~~Gllv~---- 618 (1024)
+.+.++.|+.++.. .. ..+.||.- +--.+.+||+.+|+|+|+-..-+= ...+ +....|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 45668888876544 33 12456532 223588999999999999764331 1222 3345676663
Q ss_pred --CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001705 619 --PHDQNAIADALLKLLAD-KNMWSECRKNGLK 648 (1024)
Q Consensus 619 --p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 648 (1024)
.-..++++++|++++.. .++-+++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 13678999999999952 1334455555554
No 268
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=93.76 E-value=1.2 Score=55.03 Aligned_cols=51 Identities=16% Similarity=0.264 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|-.-++.|.++- +++|.-||+-| | -.-|+.+.+||||| -|+.+-.|+++|
T Consensus 665 HK~kIVeaLq~~g-----eivAMTGDGVN-D-ApALK~AdIGIAMG---~~GTdVaKeAsD 715 (972)
T KOG0202|consen 665 HKLKIVEALQSRG-----EVVAMTGDGVN-D-APALKKADIGIAMG---ISGTDVAKEASD 715 (972)
T ss_pred hHHHHHHHHHhcC-----CEEEecCCCcc-c-hhhhhhcccceeec---CCccHhhHhhhh
Confidence 5888888886643 46777799999 9 99999999999999 477877788888
No 269
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.75 E-value=0.33 Score=64.19 Aligned_cols=40 Identities=8% Similarity=0.148 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+.+.+.++++++++. |+++.+.||-....+..+..+.++
T Consensus 726 ~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 726 KLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred CCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 4668888999999987 999999999999999999999887
No 270
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=93.69 E-value=1.7 Score=49.83 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhc
Q 001705 489 KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAK 568 (1024)
Q Consensus 489 ~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~ 568 (1024)
.+.++.+++++.++.+ +. +.+++...++. +.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~--~~--~~~~i~~a~~~-----------~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEG--KE--KILVVPSFFKG-----------KDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhh--cC--cEEEEeCCCcH-----------HHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 3566777889888853 22 44444322221 2333333322 1333332 557899999
Q ss_pred CCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 569 TKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 569 ~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
|+++..| |.+.+|++.+|+|.|..-
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 8988775 888889999999998854
No 271
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.57 E-value=0.18 Score=55.42 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHH---HHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.+.++ |+.++++|+|+.. .+...|+.+|++...++.+++.
T Consensus 121 pGA~e~L~~L~~~----G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr 171 (266)
T TIGR01533 121 AGALDFLNYANSK----GVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLK 171 (266)
T ss_pred ccHHHHHHHHHHC----CCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeC
Confidence 5568899999887 9999999999843 4557888889863234556554
No 272
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.49 E-value=0.043 Score=56.18 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=37.5
Q ss_pred EecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC
Q 001705 921 VVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 921 I~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
..+.+.+|+.+++.+++..|++++++++| ||+.| | ++|++.+
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~i-GDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAV-GDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEE-eCCHH-H-HHHHhcC
Confidence 34678899999999999999999999997 99999 9 9999864
No 273
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=93.46 E-value=0.14 Score=63.48 Aligned_cols=148 Identities=16% Similarity=0.146 Sum_probs=103.6
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHhhccccCCCC-----cEEEEEecCCCcccccccchHHHHHHHHHHHHcC---
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LLKAFGECQPLRELA-----NMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD--- 543 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll~A~~~l~~l~~~~-----~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~--- 543 (1024)
.+|+..+++++-|+...|.... ++....++..+...| ..++|.|+...... ......+..|...++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY--YLAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhcCCh
Confidence 4678888999999999998877 666655554444443 25565544322111 112345556666664442
Q ss_pred -CCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEEE
Q 001705 544 -LYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGLL 616 (1024)
Q Consensus 544 -l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gll 616 (1024)
+.+ +|.|+.-..-+--..++.+| ||-.+.|. .|..|..=+-+|.-|.+.|+|-.|+..|+.+. ++||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 68888776555556666777 99998876 59999999999999999999999999999875 789999
Q ss_pred eCCCCHHHHHH
Q 001705 617 VDPHDQNAIAD 627 (1024)
Q Consensus 617 v~p~d~~~la~ 627 (1024)
+-. +.+++.+
T Consensus 679 fG~-~~~ev~~ 688 (798)
T PRK14985 679 FGH-TVEQVKA 688 (798)
T ss_pred eCC-CHHHHHH
Confidence 954 5555443
No 274
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.42 E-value=0.12 Score=51.59 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=40.5
Q ss_pred EEEecCCCCCCCch----------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCH---------------HHHHHHHHh
Q 001705 752 IAADCYDSDGNTTE----------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSL---------------GETMEAIRR 806 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~---------------~~~~~~l~~ 806 (1024)
+++|+||||.+... .+-+.+.++|+.|+++ |+.++|+|..+. ..+...++.
T Consensus 3 ~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (147)
T TIGR01656 3 LFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ 78 (147)
T ss_pred EEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence 45899999665432 2457788999999987 999999998652 456666777
Q ss_pred cCC
Q 001705 807 CTV 809 (1024)
Q Consensus 807 ~~i 809 (1024)
+++
T Consensus 79 ~~l 81 (147)
T TIGR01656 79 LGV 81 (147)
T ss_pred CCC
Confidence 665
No 275
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=93.32 E-value=0.066 Score=54.50 Aligned_cols=90 Identities=22% Similarity=0.271 Sum_probs=59.8
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhccCCcEEEe
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG--------PVDILKALNNGLLV 617 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg--------~~eii~~~~~Gllv 617 (1024)
.+|.+.++ .+++.++|+.| |++|.- +-+.|+.|++++|+|.|.-...+ ....+.....|+.+
T Consensus 55 ~~v~~~~~--~~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF--VDNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS--SSSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec--hhhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 57888888 45799999999 988854 33589999999999998766555 12223333345444
Q ss_pred CCC--CHHHHHHHHHHHHhCHHHHHHHHHH
Q 001705 618 DPH--DQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 618 ~p~--d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
... +++.|.++|..++.++....++..+
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 322 3678999999999998875655444
No 276
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=93.26 E-value=0.55 Score=50.24 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC---ceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH---KTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag---~gVaMg 972 (1024)
.-..+..+++.+|+++++++. |||+.+ | +.|=+.+| .+|..|
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~-VGDs~~-D-i~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALM-VGDSLN-D-ILAAKAAGVPAVGVTWG 191 (220)
T ss_pred CHHHHHHHHHHhCCChhheEE-ECCCHH-H-HHHHHHcCCCEEEEECC
Confidence 457888999999999778888 599999 9 99999998 344555
No 277
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=93.20 E-value=0.35 Score=52.23 Aligned_cols=37 Identities=5% Similarity=0.050 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhccCCCCeEEEEECCCC----HHHHHHHHHhcCCC
Q 001705 770 TIKNVMKAAGLSLGLGRVGFILVTGSS----LGETMEAIRRCTVN 810 (1024)
Q Consensus 770 ~~~~~l~~l~~~~~~~gi~~viaTGR~----~~~~~~~l~~~~i~ 810 (1024)
..+++|+.++++ |+.++++|||+ ...+..+++.+|++
T Consensus 118 Ga~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 118 VARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 378899999887 99999999996 33566666678884
No 278
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=92.95 E-value=0.65 Score=55.64 Aligned_cols=41 Identities=20% Similarity=0.442 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE-Eec
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL-ILR 972 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV-aMg 972 (1024)
.-|++-++-|.++-|- .+.| |||++| | .+|++.++.|| ++|
T Consensus 767 tQKA~v~~llq~~t~k---rvc~-IGDGGN-D-VsMIq~A~~GiGI~g 808 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTGK---RVCA-IGDGGN-D-VSMIQAADVGIGIVG 808 (1051)
T ss_pred hHHHHHHHHHHHhhCc---eEEE-EcCCCc-c-chheeecccceeeec
Confidence 3699999999988874 3555 699999 9 99999887766 344
No 279
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=92.92 E-value=0.12 Score=58.13 Aligned_cols=55 Identities=9% Similarity=0.052 Sum_probs=45.6
Q ss_pred EEEEecCCCCCCC------------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 751 VIAADCYDSDGNT------------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 751 lIa~DlDGTl~~~------------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
++.+|+|||+... +..+.+.+.++|+.|+++ |+.++++|||+.......++.+++
T Consensus 160 ~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~ 226 (300)
T PHA02530 160 AVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQ 226 (300)
T ss_pred EEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHH
Confidence 4448999996542 235678999999999987 999999999999999998888776
No 280
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=92.78 E-value=0.62 Score=53.78 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
+...+.+.++++|++++++++| ||+.. | +..=+.+|..++.-
T Consensus 274 ~Peifl~A~~~lgl~Peecl~I-GDS~~-D-IeAAk~AGm~~IgV 315 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIVF-GNSNQ-T-VEAAHDARMKCVAV 315 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEEE-cCCHH-H-HHHHHHcCCEEEEE
Confidence 5678889999999999999997 99999 9 99999999755443
No 281
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=92.76 E-value=0.29 Score=51.48 Aligned_cols=40 Identities=8% Similarity=0.183 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
.+-+.+.++|+.|++. |+.++++||-+...+..+.+.+||
T Consensus 127 ~~~~~~~~~l~~L~~~----Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 127 PLRPGAKEALQELKEA----GIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EBHTTHHHHHHHHHHT----TEEEEEEESSEHHHHHHHHHHTTS
T ss_pred cchhhhhhhhhhhhcc----Ccceeeeecccccccccccccccc
Confidence 4667889999999998 999999999999999999999776
No 282
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=92.75 E-value=0.22 Score=51.07 Aligned_cols=56 Identities=4% Similarity=0.008 Sum_probs=44.2
Q ss_pred EEEEEecCCCCCCCch-hhHHHHHHHHHHHhhccCCCCeEEEEECCCC-HHHHHHHHHhcCC
Q 001705 750 IVIAADCYDSDGNTTE-TFQATIKNVMKAAGLSLGLGRVGFILVTGSS-LGETMEAIRRCTV 809 (1024)
Q Consensus 750 llIa~DlDGTl~~~~~-~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~-~~~~~~~l~~~~i 809 (1024)
-++++|+|||+...+. .+.+.+.++|++|++. |+.++|+|+.+ ...+..+++.+++
T Consensus 26 ~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 26 KGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3555899999776544 6778899999999987 99999999998 5666666677555
No 283
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.64 E-value=0.88 Score=47.69 Aligned_cols=39 Identities=13% Similarity=0.025 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCceEE
Q 001705 929 IQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 929 g~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~gVa 970 (1024)
....+++++++|+++++++.+ ||+. + | +..=+.+|...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~I-gD~~~~-D-i~~A~~aG~~~i 202 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHI-GDSLRN-D-YQGARAAGWRAL 202 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEE-CCCchH-H-HHHHHHcCCeee
Confidence 456899999999999999996 9997 8 9 877777776543
No 284
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=92.64 E-value=0.24 Score=50.88 Aligned_cols=39 Identities=5% Similarity=0.026 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCC-CHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGS-SLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR-~~~~~~~~l~~~~i 809 (1024)
+-+.+.++|+.|+++ |+.++|+|+. +...+..+++.+++
T Consensus 46 l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 46 LIKEVRDVLQTLKDA----GTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred EcccHHHHHHHHHHC----CCEEEEEeCCCChHHHHHHHHhCCc
Confidence 347789999999987 9999999998 88888999998886
No 285
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=92.55 E-value=29 Score=41.51 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=77.1
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCccccc-ccchHHHHHHHHHHHHcCCCCCEEeCC
Q 001705 476 HKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMS-NSSSVVLTTVLKLIDKYDLYGQVAYPK 552 (1024)
Q Consensus 476 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~-~~~~~~~~~i~~~i~~~~l~~~V~~~g 552 (1024)
+..+.+++|.+. +.+-+..+..+++.+. . .+.-++......+... ..............++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----R-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----C-CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 456777888754 3456777778887773 1 3322454311100000 0000000001122222 234556668
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhcc-CCcEEEeC-----CCCH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VDILKA-LNNGLLVD-----PHDQ 622 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~eii~~-~~~Gllv~-----p~d~ 622 (1024)
+.|+.+ ++...+ .++||.- +-..+++||+.+|+|+|+-...+= ...+.+ .+.|+-+. .-+.
T Consensus 334 W~PQ~~---iL~h~~--vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 WCSQIE---VLRHRA--VGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred eCCHHH---HhCCcc--cceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 888764 555551 1345522 334688999999999999764332 222222 13455542 1267
Q ss_pred HHHHHHHHHHHhCHH
Q 001705 623 NAIADALLKLLADKN 637 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~ 637 (1024)
+++++++.+++.++.
T Consensus 405 e~l~~av~~vm~~~~ 419 (455)
T PLN02152 405 GEIRRCLEAVMEEKS 419 (455)
T ss_pred HHHHHHHHHHHhhhH
Confidence 899999999997543
No 286
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=92.42 E-value=0.77 Score=56.59 Aligned_cols=146 Identities=14% Similarity=0.170 Sum_probs=86.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HH---HHHhhccccC--CCCcEEEEEecCCC-cccccccchHHHHHHHHHHHHc---
Q 001705 473 TNPHKPTILALSRPDPKKNVTT-LL---KAFGECQPLR--ELANMTLILGNRDD-IEDMSNSSSVVLTTVLKLIDKY--- 542 (1024)
Q Consensus 473 ~~~~~~~Il~vgRld~~Kgi~~-ll---~A~~~l~~l~--~~~~l~LIvG~~~~-~~~l~~~~~~~~~~i~~~i~~~--- 542 (1024)
.+|+..+++++-|+...|.... ++ .-+.++.... .....++|+|+-.. -+.+ ..+++..|..+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~---gK~iIk~I~~va~~in~D 516 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYM---GKEIIKLINNVAEVINND 516 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HH---HHHHHHHHHHHHHHHCT-
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHH---HHHHHHHHHHHHHHHhcC
Confidence 3678888999999999998777 33 3344443211 11235565544322 1221 234555555555432
Q ss_pred -CCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhcc--CCcEE
Q 001705 543 -DLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL--VEPFGLTIIEAAAYGLPVVATKNGGPVDILKA--LNNGL 615 (1024)
Q Consensus 543 -~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~--~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~--~~~Gl 615 (1024)
.+.+ +|.|+.-.+-+--..++..| ||-++.|. .|..|..-+-+|.-|.+.++|..|+..|+.+. .+|.+
T Consensus 517 p~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 517 PEVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp TTTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred hhhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 3344 68887776544444555555 99999987 59999999999999999999999999999864 45788
Q ss_pred EeCCCCHHHHH
Q 001705 616 LVDPHDQNAIA 626 (1024)
Q Consensus 616 lv~p~d~~~la 626 (1024)
++- .+.+++.
T Consensus 593 iFG-~~~~ev~ 602 (713)
T PF00343_consen 593 IFG-LTAEEVE 602 (713)
T ss_dssp EES--BHHHHH
T ss_pred EcC-CCHHHHH
Confidence 884 3555543
No 287
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.24 E-value=0.2 Score=60.51 Aligned_cols=84 Identities=18% Similarity=0.203 Sum_probs=53.6
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhccCCcEEEeCCC-
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDILKALNNGLLVDPH- 620 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii~~~~~Gllv~p~- 620 (1024)
.++....++||. ++++.. ..++||. -|--.++.||+.+|+|+|+-..-| ....+.+.+.|+.++..
T Consensus 323 ~n~~~~~W~PQ~---~lL~hp--~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVKWLPQN---DLLAHP--RVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEESS--HH---HHHTST--TEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEeccccch---hhhhcc--cceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 477888999886 445544 1245552 233478999999999999976422 23344455678888754
Q ss_pred -CHHHHHHHHHHHHhCHHH
Q 001705 621 -DQNAIADALLKLLADKNM 638 (1024)
Q Consensus 621 -d~~~la~aI~~ll~d~~~ 638 (1024)
+.+++.++|.++++|+.-
T Consensus 394 ~~~~~l~~ai~~vl~~~~y 412 (500)
T PF00201_consen 394 LTEEELRAAIREVLENPSY 412 (500)
T ss_dssp -SHHHHHHHHHHHHHSHHH
T ss_pred CcHHHHHHHHHHHHhhhHH
Confidence 578899999999999753
No 288
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=91.69 E-value=23 Score=38.64 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=76.0
Q ss_pred EEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHH-----------HHHcCCC--CC
Q 001705 481 LALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKL-----------IDKYDLY--GQ 547 (1024)
Q Consensus 481 l~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~-----------i~~~~l~--~~ 547 (1024)
+|+||..-.||+..++..-+++ +.+ +++.-++-+-+.. .. .-.|... +++..+. +-
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~--lK~-~~~~t~~~GierS-------~A-~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKI--LKP-AGFKTIMEGIERS-------PA-KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHT--TTT-TT-EEEEE---SS-------TH-HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHh--cCC-cchhHHhhhhhcC-------Cc-eeeeecCCcccccCccccccCcccCCCCc
Confidence 7999999999999999998887 333 7777666443211 11 1112211 1122222 23
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEe-cC------CCCCCCHHHHHHHHcCC-cEEEcCCCCchh-------hhccCC
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFIN-PA------LVEPFGLTIIEAAAYGL-PVVATKNGGPVD-------ILKALN 612 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~-ps------~~Egfgl~llEAmA~G~-PVVat~~Gg~~e-------ii~~~~ 612 (1024)
+..+|..=.+|..+.++.. .|.. -+ +.+.|-.+-+|..|||+ ||.-...|-... ++.+..
T Consensus 256 ~~v~~~Yi~~E~~~~Maks-----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~ 330 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS-----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPY 330 (355)
T ss_dssp EEEESS--HHHHHHHHHTE-----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--
T ss_pred ceecchhhhHHHHHHHhhc-----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCc
Confidence 5566766677778888777 4432 22 23568899999999996 666665554322 344445
Q ss_pred cEEEeCCCCHHHHHHHHHHHHhC
Q 001705 613 NGLLVDPHDQNAIADALLKLLAD 635 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll~d 635 (1024)
..+.+|-.|-++-.+.|.++-++
T Consensus 331 ~~I~~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 331 SAIYFDENDLESTVEKLIEVANN 353 (355)
T ss_dssp S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred ceeEeccchHHHHHHHHHHHhcc
Confidence 67889988999888888887655
No 289
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=91.34 E-value=0.38 Score=49.54 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE
Q 001705 932 LRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL 969 (1024)
Q Consensus 932 L~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV 969 (1024)
+...++++|+++++++++ ||+.. | ++.=+.+|..+
T Consensus 112 ~~~a~~~~~~~~~~~v~V-GDs~~-D-i~aA~~aG~~~ 146 (176)
T TIGR00213 112 LLQARKELHIDMAQSYMV-GDKLE-D-MQAGVAAKVKT 146 (176)
T ss_pred HHHHHHHcCcChhhEEEE-cCCHH-H-HHHHHHCCCcE
Confidence 356677789999999986 99999 9 88888899864
No 290
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=91.15 E-value=0.89 Score=51.34 Aligned_cols=212 Identities=14% Similarity=0.166 Sum_probs=107.2
Q ss_pred eeEEEEEecCCCCCCCchhh---HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHH----------Hhc-CCCCCC
Q 001705 748 MLIVIAADCYDSDGNTTETF---QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAI----------RRC-TVNIED 813 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~~~~i---~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l----------~~~-~i~~~~ 813 (1024)
++-++-||.|+||..+.+.+ ++-+..+++-|+ + |+.|+|+|.=.|....++- +.. .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~-~----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLR-R----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHh-c----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 78888999999988764443 234445555444 3 8999999987776655443 322 332111
Q ss_pred CCEEEecCCceEE----cCC---C-ccccCcchhhhhcccCCchhHHHHHhhhhhccCCCC-cccccccCCCCceEEEEE
Q 001705 814 FDAIVCNSGSELY----FPW---R-DMVADGDYEAHVEYRWPGENVRSVVPRVARAEDGAE-DDIVGFVDASSSRCQSYS 884 (1024)
Q Consensus 814 ~d~lI~~nGa~I~----~~~---~-~~~~d~~~~~~i~~~w~~~~v~~~l~~~~~~~~~~~-~~~~~~~~~~~~~k~~~~ 884 (1024)
-.-++-..|--=| +++ + .++++..|....-..|..+.+..++..-........ .+......-.+...+-..
T Consensus 221 k~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK~RAVGiv 300 (408)
T PF06437_consen 221 KSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRKERAVGIV 300 (408)
T ss_pred hcCEEEecccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEeecceeeEe
Confidence 1123332332211 121 0 234556676555567887777766643221100000 000000000000111111
Q ss_pred ecCCC--chhhHHHH----HHHHHhcCCeEEEEEe----cCCeEEEEecCCCCHHHHHHHHHHHh----CCCCCCEEEEe
Q 001705 885 IKPGA--ETRKVDNI----RQRLRMRGFRCNLVYT----RAGSRLNVVPSFASRIQALRYLSIRW----GIDLSKMVVFV 950 (1024)
Q Consensus 885 ~~~~~--~~~~~~el----~~~L~~~~~~~~v~~s----~~~~~lEI~p~gasKg~AL~~L~~~~----gi~~~~vvafi 950 (1024)
-.... ....++|+ ++.|........+-+| ++.-|+|| -+|.-|++.|..++ +|.+++++-+
T Consensus 301 P~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~~~~tLHV- 375 (408)
T PF06437_consen 301 PKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIKPSETLHV- 375 (408)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCCccceeee-
Confidence 01111 11223333 4455443222222222 22246777 58999999999999 9999999995
Q ss_pred CCC----C-CCChHHhhcCCCceEEec
Q 001705 951 GEK----G-DTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 951 GDs----~-N~D~~~Ml~~ag~gVaMg 972 (1024)
||. + | |+-. +.++.++-++
T Consensus 376 GDQF~s~GaN-Dfka--R~a~~t~WIa 399 (408)
T PF06437_consen 376 GDQFLSAGAN-DFKA--RLACTTAWIA 399 (408)
T ss_pred hhhhhccCCc-chhh--hhhceeeEec
Confidence 993 4 8 8211 2356666666
No 291
>PLN02940 riboflavin kinase
Probab=91.11 E-value=0.46 Score=55.37 Aligned_cols=42 Identities=7% Similarity=-0.065 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE-Eec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL-ILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV-aMg 972 (1024)
+...+...++++|+++++++++ ||+.+ | ++.=+.+|..+ ++.
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~V-GDs~~-D-i~aA~~aGi~~I~v~ 194 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVI-EDSLP-G-VMAGKAAGMEVIAVP 194 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEE-eCCHH-H-HHHHHHcCCEEEEEC
Confidence 5678999999999999999996 99999 9 88888899654 444
No 292
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=91.07 E-value=0.63 Score=50.79 Aligned_cols=42 Identities=17% Similarity=-0.008 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCC-CCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 928 RIQALRYLSIRWGID-LSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~-~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
+-..+...++++|+. +++++++ ||+.+ | +.+=+.+|. .|++.
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~I-GDs~~-D-i~aA~~aGi~~i~v~ 201 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKV-GDTVP-D-IEEGRNAGMWTVGLI 201 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEE-CCcHH-H-HHHHHHCCCeEEEEe
Confidence 456788889999995 8999996 99999 9 888888885 44444
No 293
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=90.88 E-value=0.3 Score=52.97 Aligned_cols=42 Identities=5% Similarity=-0.003 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~gVaMg 972 (1024)
+.....+.++++|+++++++.+ ||+. . | +..=+.+|...+.-
T Consensus 165 ~p~~~~~a~~~~~~~~~~~~~V-GD~~~~-D-i~~A~~aG~~~i~v 207 (238)
T PRK10748 165 FSDMYHLAAEKLNVPIGEILHV-GDDLTT-D-VAGAIRCGMQACWI 207 (238)
T ss_pred cHHHHHHHHHHcCCChhHEEEE-cCCcHH-H-HHHHHHCCCeEEEE
Confidence 4667888889999999999996 9995 7 8 77777888766655
No 294
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=90.86 E-value=0.41 Score=57.66 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=47.6
Q ss_pred EEEEecCCCCCCCch-----------h-hHHHHHHHHHHHhhccCCCCeEEEEECCCCH------------HHHHHHHHh
Q 001705 751 VIAADCYDSDGNTTE-----------T-FQATIKNVMKAAGLSLGLGRVGFILVTGSSL------------GETMEAIRR 806 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~-----------~-i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~------------~~~~~~l~~ 806 (1024)
+++||+||||..... . +-+.+.++|++|.++ |+.++|+|.-+- ..+..+++.
T Consensus 170 ia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~ 245 (526)
T TIGR01663 170 IAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKIEAIVAK 245 (526)
T ss_pred EEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHHHHHHHH
Confidence 444999999664311 1 346788999999988 999999997554 347788999
Q ss_pred cCCCCCCCCEEEecC
Q 001705 807 CTVNIEDFDAIVCNS 821 (1024)
Q Consensus 807 ~~i~~~~~d~lI~~n 821 (1024)
+|++ ++.++|..
T Consensus 246 lgip---fdviia~~ 257 (526)
T TIGR01663 246 LGVP---FQVFIAIG 257 (526)
T ss_pred cCCc---eEEEEeCC
Confidence 9985 77777754
No 295
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.50 E-value=0.5 Score=48.01 Aligned_cols=55 Identities=11% Similarity=0.092 Sum_probs=40.3
Q ss_pred EEEecCCCCCCCch-----------hhHHHHHHHHHHHhhccCCCCeEEEEECCC---------------CHHHHHHHHH
Q 001705 752 IAADCYDSDGNTTE-----------TFQATIKNVMKAAGLSLGLGRVGFILVTGS---------------SLGETMEAIR 805 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~-----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR---------------~~~~~~~~l~ 805 (1024)
+++|.||||..... .+-+.+.++|++|+++ |+.++|+|-- ....+..+++
T Consensus 4 ~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~ 79 (161)
T TIGR01261 4 LFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR 79 (161)
T ss_pred EEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 34899999665211 2336688999999987 9999999974 3456777888
Q ss_pred hcCCC
Q 001705 806 RCTVN 810 (1024)
Q Consensus 806 ~~~i~ 810 (1024)
.+|+.
T Consensus 80 ~~gl~ 84 (161)
T TIGR01261 80 SQGII 84 (161)
T ss_pred HCCCc
Confidence 88873
No 296
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=90.26 E-value=0.66 Score=47.92 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=28.7
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 931 ALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 931 AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.+.++++++|+++++++++ ||+.+ | +.+-+.+|..++
T Consensus 108 ~~~~~~~~l~~~~~~~~~V-gDs~~-D-i~~A~~aG~~~i 144 (181)
T PRK08942 108 MLLSIAERLNIDLAGSPMV-GDSLR-D-LQAAAAAGVTPV 144 (181)
T ss_pred HHHHHHHHcCCChhhEEEE-eCCHH-H-HHHHHHCCCeEE
Confidence 3444566778999999996 99999 9 888888887543
No 297
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=89.93 E-value=1.3 Score=47.15 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+.+.+.++|++|+++ |+.++|+|+.....+...++.+++
T Consensus 88 l~~G~~~~L~~L~~~----g~~~~ivT~~~~~~~~~~l~~~~l 126 (220)
T TIGR03351 88 ALPGAEEAFRSLRSS----GIKVALTTGFDRDTAERLLEKLGW 126 (220)
T ss_pred cCCCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHHhhh
Confidence 336677999999987 999999999999999999988776
No 298
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=89.84 E-value=0.38 Score=46.99 Aligned_cols=116 Identities=22% Similarity=0.159 Sum_probs=60.1
Q ss_pred CChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCcccCCCccccCCCCCCCCCCCeEEEEecCC-CCCCcc-ccccC
Q 001705 194 TGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCG-ARDKYI-AKESL 271 (1024)
Q Consensus 194 ~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~-~~~~~~-~k~~l 271 (1024)
++|...-.+-|+++|.++| |+|.+.|.... .+.++ ..|+..+.++.. +..... ....+
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~~~--------~~~v~----------~~Gl~~~~~~~~~~~~~~~~~~~~~ 67 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPPDF--------RERVE----------AAGLEFVPIPGDSRLPRSLEPLANL 67 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETGGG--------HHHHH----------HTT-EEEESSSCGGGGHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeecccc--------eeccc----------ccCceEEEecCCcCcCcccchhhhh
Confidence 7899999999999999999 99999987531 11111 238888888754 110000 00001
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhh-----cCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCC
Q 001705 272 WPYIHEFVDGALNHIVNMARAIGEQV-----NGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHS 336 (1024)
Q Consensus 272 wp~~~~f~~~~l~~~~~~~~~l~~~~-----~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~ 336 (1024)
+. +... ......+.+.+.+.. ..+....+|++..+. ....+..++.++++|.+.+...
T Consensus 68 ~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~ 130 (139)
T PF03033_consen 68 RR----LARL-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLF 130 (139)
T ss_dssp HC----HHHH-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESS
T ss_pred hh----HHHH-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhC
Confidence 11 1110 011111222222211 111112455554332 4556778888999999988763
No 299
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=89.68 E-value=0.69 Score=46.19 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
-+.+.+.|++|+ + ++.++|+|+-+...+..+++.+++
T Consensus 47 ~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 47 RPGVDEFLKRAS-E----LFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred CCCHHHHHHHHH-h----ccEEEEEeCCcHHHHHHHHHHhCc
Confidence 356788999997 4 789999999999999999998766
No 300
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=89.54 E-value=2.3 Score=52.56 Aligned_cols=39 Identities=13% Similarity=0.337 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
..|.++++++.++.. ||.|--+||-+...++.+..++||
T Consensus 648 vRPgV~~AV~~Cq~A----GItVRMVTGDNI~TAkAIA~eCGI 686 (1034)
T KOG0204|consen 648 VRPGVPEAVQLCQRA----GITVRMVTGDNINTAKAIARECGI 686 (1034)
T ss_pred CCCCcHHHHHHHHHc----CcEEEEEeCCcHHHHHHHHHHccc
Confidence 457888999999987 999999999999999999999998
No 301
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.44 E-value=0.9 Score=51.62 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=48.4
Q ss_pred EEEEecCCCCCCC----c--h-----hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHh----cCCCCCCCC
Q 001705 751 VIAADCYDSDGNT----T--E-----TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRR----CTVNIEDFD 815 (1024)
Q Consensus 751 lIa~DlDGTl~~~----~--~-----~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~----~~i~~~~~d 815 (1024)
+|++|+|+||-.- + . ..-+.+.++|++|+++ |+.++|||..+...+...|+. +++. ..|+
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~~-~~f~ 79 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQA-EDFD 79 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCcH-HHee
Confidence 5559999995431 1 0 2347899999999987 999999999999999999998 6663 2355
Q ss_pred EEEe
Q 001705 816 AIVC 819 (1024)
Q Consensus 816 ~lI~ 819 (1024)
.+++
T Consensus 80 ~~~~ 83 (320)
T TIGR01686 80 ARSI 83 (320)
T ss_pred EEEE
Confidence 5444
No 302
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=89.11 E-value=1.2 Score=48.54 Aligned_cols=64 Identities=13% Similarity=0.190 Sum_probs=46.8
Q ss_pred EEEEecCCCCCCCch--hh-HHHHHHHHHHHhhccCCCCe-EEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 751 VIAADCYDSDGNTTE--TF-QATIKNVMKAAGLSLGLGRV-GFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~--~i-~~~~~~~l~~l~~~~~~~gi-~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+|++|+|.||.+++. +| .+.+.+.+.+|++. |. .+.-++|- ..-+..-++++++. .-||.+||.
T Consensus 124 VIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~----g~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~ 191 (297)
T PF05152_consen 124 VIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ----GCVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICG 191 (297)
T ss_pred EEEEECCCcccccCCccccCChHHHHHHHHHHHc----CCEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeC
Confidence 566999999776533 33 47888999999998 74 55555554 56677788888886 468888884
No 303
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=89.08 E-value=2.8 Score=46.11 Aligned_cols=51 Identities=29% Similarity=0.402 Sum_probs=35.4
Q ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhc-CCCc-eEEecCCCCCChHHHhcc
Q 001705 931 ALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLV-GLHK-TLILRGSVMYGSEKLLHG 985 (1024)
Q Consensus 931 AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~-~ag~-gVaMgna~~NA~~elk~~ 985 (1024)
...+|.++++|+++.++++ ||..||| + ||. .+|. ++.|--.+ +-.++++..
T Consensus 229 m~~~l~~~~~i~psRt~mv-GDRL~TD-I-lFG~~~G~~TLLvltGv-~~led~~~~ 281 (306)
T KOG2882|consen 229 MFEYLLEKFNIDPSRTCMV-GDRLDTD-I-LFGKNCGFKTLLVLSGV-TTLEDILEA 281 (306)
T ss_pred HHHHHHHHcCCCcceEEEE-cccchhh-h-hHhhccCcceEEEecCc-CcHHHHHhc
Confidence 4678899999999999996 9999999 4 443 4554 56666344 344444443
No 304
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=89.01 E-value=0.84 Score=46.76 Aligned_cols=41 Identities=10% Similarity=0.101 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
++++.++++.+.|+++ |+.++++||=-...+.++..++||+
T Consensus 88 ~lT~Gi~eLv~~L~~~----~~~v~liSGGF~~~i~~Va~~Lgi~ 128 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHAR----GTQVYLISGGFRQLIEPVAEQLGIP 128 (227)
T ss_pred ccCCCHHHHHHHHHHc----CCeEEEEcCChHHHHHHHHHHhCCc
Confidence 3557888999999998 9999999999999999999999985
No 305
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=88.63 E-value=1.5 Score=53.08 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT 808 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~ 808 (1024)
.+.+...++++++++. |+.+++.||.+...+..+.+++|
T Consensus 347 ~lr~~~~~~i~~l~~~----gi~~~~ltGD~~~~a~~ia~~lg 385 (499)
T TIGR01494 347 PLRDDAKETISELREA----GIRVIMLTGDNVLTAKAIAKELG 385 (499)
T ss_pred CCchhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcC
Confidence 4567788999999887 99999999999999998888854
No 306
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=88.45 E-value=0.86 Score=48.52 Aligned_cols=43 Identities=14% Similarity=0.170 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
.+..+++.++++++++++++++| ||+.+ | ++|.+.+|. +|.+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~i-gD~~~-D-i~~a~~~g~~~i~v~ 193 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLFV-GDSRN-D-IQAARAAGCPSVGVT 193 (226)
T ss_pred cChHHHHHHHHHcCCChhheEEE-CCCHH-H-HHHHHHCCCcEEEEC
Confidence 35789999999999999999996 99999 9 999999998 66665
No 307
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=88.23 E-value=1.2 Score=48.77 Aligned_cols=39 Identities=8% Similarity=0.025 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHH---HHHHHHHhcCCC
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLG---ETMEAIRRCTVN 810 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~---~~~~~l~~~~i~ 810 (1024)
.+.+.+..+.+.+. |+.+++.|||+-. .....|...|++
T Consensus 147 lp~al~ly~~l~~~----G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 147 LPETLKNYNKLVSL----GFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred ChHHHHHHHHHHHC----CCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 45778888899887 9999999999843 356677777874
No 308
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=87.34 E-value=1.5 Score=44.10 Aligned_cols=55 Identities=7% Similarity=0.066 Sum_probs=47.8
Q ss_pred EEEecCCCCCC-CchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 752 IAADCYDSDGN-TTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 752 Ia~DlDGTl~~-~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
|.+|+|.||.. ++...+++.++.+..+++. |++++|.|-.+..-+..+...++++
T Consensus 31 vi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 31 VILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred EEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 33899999554 3456889999999999997 9999999999999999999998885
No 309
>PRK11590 hypothetical protein; Provisional
Probab=87.30 E-value=0.73 Score=48.93 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=38.3
Q ss_pred cCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhc
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLH 984 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~ 984 (1024)
..|..|-..|+.++ +.+.+...++ |||.| | ++||+.+++++++. ..+.|++
T Consensus 159 c~g~~K~~~l~~~~---~~~~~~~~aY-~Ds~~-D-~pmL~~a~~~~~vn-----p~~~l~~ 209 (211)
T PRK11590 159 CLGHEKVAQLERKI---GTPLRLYSGY-SDSKQ-D-NPLLYFCQHRWRVT-----PRGELQQ 209 (211)
T ss_pred CCChHHHHHHHHHh---CCCcceEEEe-cCCcc-c-HHHHHhCCCCEEEC-----ccHHhhc
Confidence 34445655555444 6677788898 99999 9 99999999999986 6666654
No 310
>PRK06769 hypothetical protein; Validated
Probab=87.29 E-value=0.94 Score=46.52 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=32.1
Q ss_pred EEEEecCCCCCCC-------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCC
Q 001705 751 VIAADCYDSDGNT-------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSS 796 (1024)
Q Consensus 751 lIa~DlDGTl~~~-------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~ 796 (1024)
+|.+|.||||... .-.+-+.+.++|++|+++ |+.++|+|+-+
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~ 54 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQP 54 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCc
Confidence 4448999996332 112457889999999987 99999999865
No 311
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=86.89 E-value=3.5 Score=49.34 Aligned_cols=39 Identities=10% Similarity=0.172 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.|...+...+++++ ++++++| ||+.+ | +.+-+.+|..++
T Consensus 386 ~kP~~~~~al~~l~--~~~~v~V-GDs~~-D-i~aAk~AG~~~I 424 (459)
T PRK06698 386 NKSDLVKSILNKYD--IKEAAVV-GDRLS-D-INAAKDNGLIAI 424 (459)
T ss_pred CCcHHHHHHHHhcC--cceEEEE-eCCHH-H-HHHHHHCCCeEE
Confidence 46667777777764 5889886 99999 9 999999997543
No 312
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=86.79 E-value=1 Score=51.28 Aligned_cols=60 Identities=17% Similarity=0.088 Sum_probs=41.0
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEE---CCCCHHHHHHHH-HhcCCCC
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILV---TGSSLGETMEAI-RRCTVNI 811 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~via---TGR~~~~~~~~l-~~~~i~~ 811 (1024)
.+.|||||||.+.+ .+.+...++++.|+.....-|+.+++. +|++.......+ +.+|++.
T Consensus 2 ~~ifD~DGvL~~g~-~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 2 GFAFDIDGVLFRGK-KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred EEEEeCcCceECCc-cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 45699999987764 457888899999875200015555555 477788766655 8888863
No 313
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=85.58 E-value=0.76 Score=49.55 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=42.3
Q ss_pred ceeEEEEEecCCCCCCC-c-------------------------hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHH--
Q 001705 747 QMLIVIAADCYDSDGNT-T-------------------------ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLG-- 798 (1024)
Q Consensus 747 ~rlllIa~DlDGTl~~~-~-------------------------~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~-- 798 (1024)
.+...|.+|+|+|+++. . ....+...++++.+.++ |+.|+++|||+-.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r 145 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQR 145 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhH
Confidence 34446669999996541 0 12224477899999988 9999999999755
Q ss_pred -HHHHHHHhcCCC
Q 001705 799 -ETMEAIRRCTVN 810 (1024)
Q Consensus 799 -~~~~~l~~~~i~ 810 (1024)
....-|...|++
T Consensus 146 ~~T~~nL~~~G~~ 158 (229)
T PF03767_consen 146 EATEKNLKKAGFP 158 (229)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCC
Confidence 455667777763
No 314
>PLN02954 phosphoserine phosphatase
Probab=85.47 E-value=1.2 Score=47.43 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
.+.+|..+++.+++++|+ +++++| ||+.| | +.|-+.+|..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~i-GDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVMI-GDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEEE-eCCHH-H-HHhhhcCCCCEEE
Confidence 456799999999999886 588886 99999 9 9998776665544
No 315
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=84.65 E-value=0.94 Score=47.54 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=27.3
Q ss_pred HHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 936 SIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 936 ~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
++.++...++++++ ||+.| | +.|.+.+|.|++.+
T Consensus 137 l~~~~~~~~~~v~i-GDs~~-D-~~~~~aa~~~v~~~ 170 (205)
T PRK13582 137 VKALKSLGYRVIAA-GDSYN-D-TTMLGEADAGILFR 170 (205)
T ss_pred HHHHHHhCCeEEEE-eCCHH-H-HHHHHhCCCCEEEC
Confidence 33444555788886 99999 9 99999999999866
No 316
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.59 E-value=21 Score=39.36 Aligned_cols=142 Identities=20% Similarity=0.272 Sum_probs=81.3
Q ss_pred CCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCC------CCCCCCH
Q 001705 486 PDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPK------HHKQSDV 559 (1024)
Q Consensus 486 ld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g------~~~~~el 559 (1024)
++...|+..++.++-.+... ...+++...-.+. +. ...+..+.++.+|.+.-...+ +++++..
T Consensus 237 pea~~nl~~il~slcal~~~--~a~vvfw~ai~~~---lp------l~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsf 305 (412)
T COG4370 237 PEAQTNLAVILGSLCALPAM--FALVVFWAAIAPE---LP------LLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSF 305 (412)
T ss_pred hHHHhhHHHHHHHHhhhHHH--HHHHHHHhccCcC---CC------HHHHHHHHHhcCcchhhhhhccCceEEEEeHHHH
Confidence 55678888888866555311 1111111110111 10 233445555556554322122 3456788
Q ss_pred HHHHHHhhcCCcEEEecCCCCCC-CHHHHHHHHcCCcEEEcCCCCch------hhhc--cCCcEEEeCCCCHHHHHHHHH
Q 001705 560 PDIYRLAAKTKGVFINPALVEPF-GLTIIEAAAYGLPVVATKNGGPV------DILK--ALNNGLLVDPHDQNAIADALL 630 (1024)
Q Consensus 560 ~~ly~~A~~~~dv~v~ps~~Egf-gl~llEAmA~G~PVVat~~Gg~~------eii~--~~~~Gllv~p~d~~~la~aI~ 630 (1024)
.+++..| |+.+ +| |...-.+.-.|+|||+...-|+. +--. -+..=.++.| ..+.+..+.
T Consensus 306 adiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~--~aq~a~~~~ 373 (412)
T COG4370 306 ADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP--EAQAAAQAV 373 (412)
T ss_pred HHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC--chhhHHHHH
Confidence 9999999 6755 33 44444567789999998865552 1100 0223356665 334455555
Q ss_pred H-HHhCHHHHHHHHHHHHHHH
Q 001705 631 K-LLADKNMWSECRKNGLKNI 650 (1024)
Q Consensus 631 ~-ll~d~~~~~~~~~~~~~~~ 650 (1024)
+ ++.||+....++.|+++++
T Consensus 374 q~ll~dp~r~~air~nGqrRi 394 (412)
T COG4370 374 QELLGDPQRLTAIRHNGQRRI 394 (412)
T ss_pred HHHhcChHHHHHHHhcchhhc
Confidence 5 9999999999999999987
No 317
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=84.58 E-value=1.1 Score=47.52 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhc
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLH 984 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~ 984 (1024)
.|..|-..|+..+ +.+.+...++ |||.| | .+||+.+++++++. .++.|.+
T Consensus 159 ~g~~Kv~rl~~~~---~~~~~~~~aY-sDS~~-D-~pmL~~a~~~~~Vn-----p~~~L~~ 208 (210)
T TIGR01545 159 LGHEKVAQLEQKI---GSPLKLYSGY-SDSKQ-D-NPLLAFCEHRWRVS-----KRGELQQ 208 (210)
T ss_pred CChHHHHHHHHHh---CCChhheEEe-cCCcc-c-HHHHHhCCCcEEEC-----cchHhcc
Confidence 3445666565554 5577778898 99999 9 99999999999986 5655543
No 318
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=84.43 E-value=4 Score=51.06 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=47.5
Q ss_pred EEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 918 RLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 918 ~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+-|++|. .|..=++.|.+.- ..++++||+-| | -.-|..+..||+|| .+++-..++||
T Consensus 766 ~aev~P~--~K~~~Ik~lq~~~-----~~VaMVGDGIN-D-aPALA~AdVGIaig----~gs~vAieaAD 822 (951)
T KOG0207|consen 766 YAEVLPE--QKAEKIKEIQKNG-----GPVAMVGDGIN-D-APALAQADVGIAIG----AGSDVAIEAAD 822 (951)
T ss_pred EeccCch--hhHHHHHHHHhcC-----CcEEEEeCCCC-c-cHHHHhhccceeec----cccHHHHhhCC
Confidence 5677774 5888888887654 34566799999 9 99999999999999 99888889999
No 319
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=83.59 E-value=1.9 Score=49.54 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=42.6
Q ss_pred ceeEEEEEecCCCCCCC-----------chhhHHHHHHHHHHHhhccCCCCeEEEEECCC---------------CHHHH
Q 001705 747 QMLIVIAADCYDSDGNT-----------TETFQATIKNVMKAAGLSLGLGRVGFILVTGS---------------SLGET 800 (1024)
Q Consensus 747 ~rlllIa~DlDGTl~~~-----------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR---------------~~~~~ 800 (1024)
+++++ +|-||||... +..+-+.+.++|.+|+++ |+.++|+|.- +...+
T Consensus 2 ~k~l~--lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i 75 (354)
T PRK05446 2 QKILF--IDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLM 75 (354)
T ss_pred CcEEE--EeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHH
Confidence 34555 8999995542 234557789999999887 9999999984 34457
Q ss_pred HHHHHhcCCC
Q 001705 801 MEAIRRCTVN 810 (1024)
Q Consensus 801 ~~~l~~~~i~ 810 (1024)
...++.+++.
T Consensus 76 ~~iL~~~gl~ 85 (354)
T PRK05446 76 MQIFESQGIK 85 (354)
T ss_pred HHHHHHcCCc
Confidence 7788888873
No 320
>PTZ00445 p36-lilke protein; Provisional
Probab=83.53 E-value=1.4 Score=46.24 Aligned_cols=47 Identities=6% Similarity=0.099 Sum_probs=36.9
Q ss_pred cCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCce-EEec
Q 001705 923 PSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT-LILR 972 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~g-VaMg 972 (1024)
|.-..|..=++++++++|+++++++.| -|... . ++--+..|.- +...
T Consensus 158 Pdp~iK~yHle~ll~~~gl~peE~LFI-DD~~~-N-VeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 158 PMPLDKSYHLKQVCSDFNVNPDEILFI-DDDMN-N-CKNALKEGYIALHVT 205 (219)
T ss_pred CCccchHHHHHHHHHHcCCCHHHeEee-cCCHH-H-HHHHHHCCCEEEEcC
Confidence 455678888899999999999999987 88766 5 8888888864 4444
No 321
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=82.95 E-value=1.9 Score=41.47 Aligned_cols=42 Identities=24% Similarity=0.165 Sum_probs=34.6
Q ss_pred CCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 942 DLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 942 ~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
+-+.+++ +||+.| | +-||+.+..||+.=.- |++++.++..||
T Consensus 92 ~~~k~vm-VGnGaN-D-~laLr~ADlGI~tiq~-e~v~~r~l~~AD 133 (152)
T COG4087 92 RYEKVVM-VGNGAN-D-ILALREADLGICTIQQ-EGVPERLLLTAD 133 (152)
T ss_pred CCcEEEE-ecCCcc-h-HHHhhhcccceEEecc-CCcchHHHhhch
Confidence 3355667 599999 9 9999999999866433 699999999999
No 322
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=82.66 E-value=10 Score=39.54 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=31.6
Q ss_pred cceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCEEEeCCH
Q 001705 304 WPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTR 383 (1024)
Q Consensus 304 ~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~Vi~~S~ 383 (1024)
+||++.......-.--...+++.|+|+++.-=-+ +..-...|..++.+ -+.+++..|.|.+.|+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarl--------------s~~s~~~~~~~~~~--~r~~l~~f~~i~aqs~ 158 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARL--------------SERSFRRYRRFPFL--FRPLLSRFDRILAQSE 158 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE----------------------------HH--HHHHGGG-SEEEESSH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeee--------------ccccchhhhhhHHH--HHHHHHhCCEEEECCH
Confidence 6898776654333333334455689987754322 11111223222222 4567899999999999
Q ss_pred HHHHHHHhc
Q 001705 384 QEIEMQWGL 392 (1024)
Q Consensus 384 ~~~~~~~~~ 392 (1024)
...+.+..+
T Consensus 159 ~da~r~~~l 167 (186)
T PF04413_consen 159 ADAERFRKL 167 (186)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHc
Confidence 988876443
No 323
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=82.66 E-value=2.1 Score=45.50 Aligned_cols=36 Identities=6% Similarity=-0.009 Sum_probs=25.5
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.++|+.++++ |+.++|+||-....+..+++.+++.
T Consensus 90 ~~~~l~~l~~~----g~~~~IvS~~~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 90 AEELVKTLKEK----GYKVAVISGGFDLFAEHVKDKLGLD 125 (219)
T ss_pred HHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 34455555554 7888888888877888888887763
No 324
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=82.13 E-value=1.1e+02 Score=35.63 Aligned_cols=84 Identities=18% Similarity=0.339 Sum_probs=50.9
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhccC-CcEE--EeCCCC
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN-GGPVDILKAL-NNGL--LVDPHD 621 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~-Gg~~eii~~~-~~Gl--lv~p~d 621 (1024)
.++.+..--..+++-..++.+ |++|-.-+ -.++=|++.|+|+|+=.. +-...+.++. -.++ -+.|.|
T Consensus 266 ~~i~~~~d~~~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSDEYAEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecchHHHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 455543332235666788888 78774322 346779999999998653 2233333322 2233 445678
Q ss_pred HHHHHHHHHHHHhC-HHH
Q 001705 622 QNAIADALLKLLAD-KNM 638 (1024)
Q Consensus 622 ~~~la~aI~~ll~d-~~~ 638 (1024)
.+.+..+..+.++. +++
T Consensus 337 ~~~l~~~~~e~~~~~~~~ 354 (385)
T COG2327 337 AEILSAVVLERLTKLDEL 354 (385)
T ss_pred hHHHHHHHHHHHhccHHH
Confidence 88888888887774 443
No 325
>PLN03004 UDP-glycosyltransferase
Probab=80.65 E-value=4.4 Score=48.25 Aligned_cols=143 Identities=10% Similarity=0.150 Sum_probs=80.5
Q ss_pred CCCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchH-HHHHHHHHHHHcCCCCCEEeC
Q 001705 475 PHKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSV-VLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 475 ~~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~-~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
++..+.+++|... +.+-+..+..+++... . .+.-++......+.-...... +-. ...++.. ...+.+.
T Consensus 269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~---gf~er~~-~~g~~v~ 339 (451)
T PLN03004 269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPE---GFLSRTE-DKGMVVK 339 (451)
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCCh---HHHHhcc-CCcEEEE
Confidence 3466788888873 3455666777777652 2 332244321110000000000 001 1111111 2357778
Q ss_pred CCCCCCCHHHHHHHhhcCCcE--EEecCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-ccCCcEEEeCC-----
Q 001705 552 KHHKQSDVPDIYRLAAKTKGV--FINPALVEPFGLTIIEAAAYGLPVVATKNGG----PVDIL-KALNNGLLVDP----- 619 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv--~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg----~~eii-~~~~~Gllv~p----- 619 (1024)
+++||.+ +++.+ ++ ||. -+--++++||+++|+|+|+-...+ ....+ ...+.|+.++.
T Consensus 340 ~W~PQ~~---iL~H~----~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 408 (451)
T PLN03004 340 SWAPQVP---VLNHK----AVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF 408 (451)
T ss_pred eeCCHHH---HhCCC----ccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence 8988875 66666 45 552 223468899999999999976432 23333 33467888753
Q ss_pred CCHHHHHHHHHHHHhCHH
Q 001705 620 HDQNAIADALLKLLADKN 637 (1024)
Q Consensus 620 ~d~~~la~aI~~ll~d~~ 637 (1024)
-+.++++++|.+++.+++
T Consensus 409 ~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCHHHHHHHHHHHhcCHH
Confidence 268999999999998754
No 326
>COG4996 Predicted phosphatase [General function prediction only]
Probab=79.37 E-value=4.5 Score=38.90 Aligned_cols=47 Identities=21% Similarity=0.132 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
-+..++.+++++.. |..+..+|=.-..-+.+.|..+++. ..|+++|.
T Consensus 43 ~~~v~~~l~warns----G~i~~~~sWN~~~kA~~aLral~~~-~yFhy~Vi 89 (164)
T COG4996 43 FPDVKETLKWARNS----GYILGLASWNFEDKAIKALRALDLL-QYFHYIVI 89 (164)
T ss_pred cHHHHHHHHHHHhC----CcEEEEeecCchHHHHHHHHHhchh-hhEEEEEe
Confidence 46788999999886 9999999999999999999998875 45666544
No 327
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=79.26 E-value=4 Score=41.65 Aligned_cols=60 Identities=5% Similarity=-0.051 Sum_probs=45.1
Q ss_pred eeEEEEEecCCCCCCC-chhhHHHHHHHHHHHhhccCCCCe-EEEEECCC-------CHHHHHHHHHhcCCC
Q 001705 748 MLIVIAADCYDSDGNT-TETFQATIKNVMKAAGLSLGLGRV-GFILVTGS-------SLGETMEAIRRCTVN 810 (1024)
Q Consensus 748 rlllIa~DlDGTl~~~-~~~i~~~~~~~l~~l~~~~~~~gi-~~viaTGR-------~~~~~~~~l~~~~i~ 810 (1024)
-+-.+.+|.|.||..+ ..+++++..+.++++++. .+. .++|+|-. ....+..+-+.+|++
T Consensus 40 Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~---~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 40 GIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQ---FGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred CceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHH---CCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 3445559999997766 567899999999999987 232 47776665 377788888888885
No 328
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=78.59 E-value=16 Score=44.00 Aligned_cols=178 Identities=15% Similarity=0.159 Sum_probs=119.3
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCC-CEEeCC
Q 001705 474 NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYG-QVAYPK 552 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~-~V~~~g 552 (1024)
+.+..++..+..+ .|=-+..++.+.++ +..-|+-+|++-.-|... -.++++.+..+|+.+ +|.|..
T Consensus 756 p~d~vvf~~FNqL--yKidP~~l~~W~~I--Lk~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riifs~ 822 (966)
T KOG4626|consen 756 PEDAVVFCNFNQL--YKIDPSTLQMWANI--LKRVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIFSP 822 (966)
T ss_pred CCCeEEEeechhh--hcCCHHHHHHHHHH--HHhCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceeecc
Confidence 3444444444444 23234566666666 345566555442222111 156778888999864 678877
Q ss_pred CCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-------CCCchhhhccCCcEEEeCCCCHHHH
Q 001705 553 HHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-------NGGPVDILKALNNGLLVDPHDQNAI 625 (1024)
Q Consensus 553 ~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-------~Gg~~eii~~~~~Gllv~p~d~~~l 625 (1024)
-...+|-..-+..| ||.+=+++.-|- .|-.|.+.+|+|+|.-. +++. .+...+.|-+| ..+.++.
T Consensus 823 va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~S--ll~~~Gl~hli-ak~~eEY 894 (966)
T KOG4626|consen 823 VAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAAS--LLTALGLGHLI-AKNREEY 894 (966)
T ss_pred ccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHH--HHHHcccHHHH-hhhHHHH
Confidence 77778888889999 999988887653 55678899999998532 2221 12222334444 3477888
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHHHhhhc
Q 001705 626 ADALLKLLADKNMWSECRKNGLKNI-H--RFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 626 a~aI~~ll~d~~~~~~~~~~~~~~~-~--~fsw~~~a~~~l~~~~~~~~~ 672 (1024)
.+.-.+|-+|.+..+.++...+... . -|+-..++..+.+.|.+.=.+
T Consensus 895 ~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 895 VQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 8888888889998899988888875 2 899999999999999876443
No 329
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=78.29 E-value=3.4 Score=42.22 Aligned_cols=38 Identities=5% Similarity=0.093 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCC-CHHHHHHHHHhcCC
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGS-SLGETMEAIRRCTV 809 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR-~~~~~~~~l~~~~i 809 (1024)
-+.+..+|++|+++ |+.+++||=- ...-++++|+.+++
T Consensus 47 ypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~~L~~l~i 85 (169)
T PF12689_consen 47 YPDVPEILQELKER----GVKLAVASRTDEPDWARELLKLLEI 85 (169)
T ss_dssp -TTHHHHHHHHHHC----T--EEEEE--S-HHHHHHHHHHTT-
T ss_pred CcCHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHhcCC
Confidence 35688999999987 9999999954 45688999999877
No 330
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=78.17 E-value=11 Score=38.64 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=39.6
Q ss_pred CcceEEEEcCCChHHHHHHHHccC------CCCEEEEeCCCchhhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCC
Q 001705 303 TWPYVIHGHYADAGEVAAHLSGAL------NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASE 376 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~a~~l~~~~------~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad 376 (1024)
.+||+|.++.+..+....++++.+ +.++||-- ++.+.+ .+..+-++ ++.-||
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~------------~lSlTGkl---------ly~~aD 148 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVK------------TLSLTGKL---------LYPFAD 148 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecC------------CCchHHHH---------HHHhCC
Confidence 379999999997777766777666 88887732 221111 11112222 344699
Q ss_pred EEEeCCHHHHH
Q 001705 377 MVVTSTRQEIE 387 (1024)
Q Consensus 377 ~Vi~~S~~~~~ 387 (1024)
.++++-++..+
T Consensus 149 ~f~VQW~~l~~ 159 (170)
T PF08660_consen 149 RFIVQWEELAE 159 (170)
T ss_pred EEEEcCHHHHh
Confidence 99999886554
No 331
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=78.10 E-value=1.7 Score=44.12 Aligned_cols=56 Identities=11% Similarity=0.108 Sum_probs=35.8
Q ss_pred EEEEecCCCCCCC-----------chh-hHHHHHHHHHHHhhccCCCCeEEEEEC-----CC--CH-------HHHHHHH
Q 001705 751 VIAADCYDSDGNT-----------TET-FQATIKNVMKAAGLSLGLGRVGFILVT-----GS--SL-------GETMEAI 804 (1024)
Q Consensus 751 lIa~DlDGTl~~~-----------~~~-i~~~~~~~l~~l~~~~~~~gi~~viaT-----GR--~~-------~~~~~~l 804 (1024)
+.++|+||||..+ +-. +.+.+.++|+++.++ |..+||+| |+ .. .-+..++
T Consensus 2 ia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il 77 (159)
T PF08645_consen 2 IAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL 77 (159)
T ss_dssp EEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHHH
Confidence 4569999994432 112 345788999999887 99999998 55 12 2244566
Q ss_pred HhcCCC
Q 001705 805 RRCTVN 810 (1024)
Q Consensus 805 ~~~~i~ 810 (1024)
+.++++
T Consensus 78 ~~l~ip 83 (159)
T PF08645_consen 78 KELGIP 83 (159)
T ss_dssp HHCTS-
T ss_pred HHcCCc
Confidence 776763
No 332
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=77.78 E-value=3.9 Score=35.50 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=33.6
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEecC
Q 001705 930 QALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILRG 973 (1024)
Q Consensus 930 ~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMgn 973 (1024)
..+...++++++++++++++ ||+..|| +.+=+.+|. +|.+..
T Consensus 8 ~~~~~a~~~~~~~~~~~~~V-GD~~~~D-i~~a~~~G~~~ilV~t 50 (75)
T PF13242_consen 8 GMLEQALKRLGVDPSRCVMV-GDSLETD-IEAAKAAGIDTILVLT 50 (75)
T ss_dssp HHHHHHHHHHTSGGGGEEEE-ESSTTTH-HHHHHHTTSEEEEESS
T ss_pred HHHHHHHHHcCCCHHHEEEE-cCCcHhH-HHHHHHcCCcEEEECC
Confidence 45778889999999999995 9994449 998888886 566663
No 333
>COG1543 Uncharacterized conserved protein [Function unknown]
Probab=77.77 E-value=0.45 Score=54.88 Aligned_cols=72 Identities=21% Similarity=0.142 Sum_probs=57.9
Q ss_pred hhhhhhHHHHHHhhhhh---hhchHHHHHHHHHHHHHHhcCccccccccccCccccccCCCCCcccccCcccccccc
Q 001705 83 RLENMCWRIWHLARKKK---QIAWEDAQRLAKRRLEREQGRNDAADDLSELSEGEKEKGDSINASESLKEIPRINSD 156 (1024)
Q Consensus 83 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1024)
|+=|+-=|=|-|+--+- -+...+|++||++|...|.-||+.+.+. |.+|+.+.+.|.++|...+.||.|+++
T Consensus 425 ~~l~Q~aRE~lLa~ssdW~fi~~~~ta~~Ya~~r~~~H~~~f~~l~~a--l~~g~~da~~L~~~e~~~~~f~~i~~r 499 (504)
T COG1543 425 RALNQAARELLLAVSSDWPFIMSKGTAAEYAARRIHEHAHRFRRLAEA--LASGRFDAQWLEEVENRDNIFPEINYR 499 (504)
T ss_pred HHHHHHHHHHHHHHhccchHhhCCCchHHHHHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHhhcccccccccc
Confidence 45555555555543321 1566799999999999999999999998 889999888888999999999999985
No 334
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=77.63 E-value=6.2 Score=49.76 Aligned_cols=41 Identities=15% Similarity=0.372 Sum_probs=37.1
Q ss_pred hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 765 ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 765 ~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+++-+.++.+|+.|.+. +|..+.+||-++..+....++.|+
T Consensus 704 NkLK~~T~~VI~eL~~A----nIRtVMcTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRA----NIRTVMCTGDNLLTAISVAKECGM 744 (1140)
T ss_pred cccccccHHHHHHHHhh----cceEEEEcCCchheeeehhhcccc
Confidence 56678889999999987 999999999999999999999887
No 335
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=75.83 E-value=7.1 Score=35.91 Aligned_cols=81 Identities=19% Similarity=0.283 Sum_probs=55.4
Q ss_pred EEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe--CCCCCCCC--HHHHHHHhhcCCcEEEecCCC---CCCCHH
Q 001705 513 LILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY--PKHHKQSD--VPDIYRLAAKTKGVFINPALV---EPFGLT 585 (1024)
Q Consensus 513 LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~--~g~~~~~e--l~~ly~~A~~~~dv~v~ps~~---Egfgl~ 585 (1024)
+|+|+.++ ....+...++++|..- +.+ .+...... ++.....| |++|++.-+ ..+-.+
T Consensus 3 liVGG~~~----------~~~~~~~~~~~~G~~~-~~hg~~~~~~~~~~~l~~~i~~a----D~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 3 LIVGGRED----------RERRYKRILEKYGGKL-IHHGRDGGDEKKASRLPSKIKKA----DLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEcCCcc----------cHHHHHHHHHHcCCEE-EEEecCCCCccchhHHHHhcCCC----CEEEEEeCCcChHHHHHH
Confidence 67777543 3567788888888652 333 24444444 88888888 898887654 344455
Q ss_pred HHHHHHcCCcEEEcCCCCchhhh
Q 001705 586 IIEAAAYGLPVVATKNGGPVDIL 608 (1024)
Q Consensus 586 llEAmA~G~PVVat~~Gg~~eii 608 (1024)
--+|-..|+|++.++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 66777789999999977766654
No 336
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=75.21 E-value=62 Score=38.86 Aligned_cols=161 Identities=17% Similarity=0.211 Sum_probs=90.0
Q ss_pred CcEEEEEeCCC-----CCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcC--CCCCEE
Q 001705 477 KPTILALSRPD-----PKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYD--LYGQVA 549 (1024)
Q Consensus 477 ~~~Il~vgRld-----~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~--l~~~V~ 549 (1024)
..++++.|... +.+-...++.+++.+ +++.++.--.++... .+.+... -.++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~------~~~~FiW~~~~~~~~-------------~~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL------QGVTFLWKYRPDDSI-------------YFPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC------CCceEEEEecCCcch-------------hhhhcCCCCCcCceE
Confidence 55667777765 345566677788766 234343322211000 0111111 245799
Q ss_pred eCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC-CCC----chhhhccCCcEEEeC--CCCH
Q 001705 550 YPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK-NGG----PVDILKALNNGLLVD--PHDQ 622 (1024)
Q Consensus 550 ~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~-~Gg----~~eii~~~~~Gllv~--p~d~ 622 (1024)
+.++.||.++. .+.+..++||. .-|+|-+ +|++.+|+|+|+-. .|. ..-+.+++..+++.. -.+.
T Consensus 339 ~~~W~PQ~~ll----l~H~~v~~FvT---HgG~nSt-~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~ 410 (496)
T KOG1192|consen 339 LSKWAPQNDLL----LDHPAVGGFVT---HGGWNST-LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSE 410 (496)
T ss_pred EecCCCcHHHh----cCCCcCcEEEE---CCcccHH-HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcH
Confidence 99999998876 33333356652 3566655 99999999999543 332 223344444444432 1233
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHH
Q 001705 623 NAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 623 ~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~ 666 (1024)
+ +.+++..++++++..+..++-+.... +..+. ..+..+.+..
T Consensus 411 ~-~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~ 453 (496)
T KOG1192|consen 411 E-LLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKWVEFV 453 (496)
T ss_pred H-HHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHH
Confidence 4 88999999988876555444444333 45566 5555443433
No 337
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=74.74 E-value=24 Score=38.78 Aligned_cols=122 Identities=13% Similarity=0.125 Sum_probs=69.3
Q ss_pred CCCcEEEEEeCCCCC-------CCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHc-CCCC
Q 001705 475 PHKPTILALSRPDPK-------KNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKY-DLYG 546 (1024)
Q Consensus 475 ~~~~~Il~vgRld~~-------Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~-~l~~ 546 (1024)
.++++|++....... .+....++.+..+. ...|+..|++=..|...... .. ....+. ...+
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~--~~~p~~~lvvK~HP~~~~~~--~~-------~~~~~~~~~~~ 183 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFA--KENPDAKLVVKPHPDERGGN--KY-------SYLEELPNLPN 183 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHH--HHCCCCEEEEEECchhhCCC--Ch-------hHhhhhhcCCC
Confidence 567788888776543 23444555555553 33457777775554321111 01 222222 2333
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHH
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAI 625 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~l 625 (1024)
.+.+.. .-.+.+++..| |.++.- -+.+-+||+.+|+||++-...-.. ..|+..+....+.+
T Consensus 184 ~~~~~~---~~~~~~Ll~~s----~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y~------~~glt~~~~~~~~~ 244 (269)
T PF05159_consen 184 VVIIDD---DVNLYELLEQS----DAVVTI-----NSTVGLEALLHGKPVIVFGRAFYA------GWGLTDDRKLDEFW 244 (269)
T ss_pred eEEECC---CCCHHHHHHhC----CEEEEE-----CCHHHHHHHHcCCceEEecCcccC------CCCccCcCCchhhh
Confidence 333332 45888999999 565533 268999999999999996544432 23666655444333
No 338
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=74.58 E-value=1.5e+02 Score=33.07 Aligned_cols=40 Identities=28% Similarity=0.353 Sum_probs=30.0
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
...+.+|+.++++.| +++|-..+ -.++=|+.+|+|+|+-.
T Consensus 237 ~~~~~~e~~~~i~~~----~~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 237 SPLDPEELLGLFASA----RLVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred ecCCHHHHHHHHhhC----CEEEEech-----HHHHHHHHcCCCEEEee
Confidence 445667888999999 88775443 34677999999999753
No 339
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=74.00 E-value=4.4 Score=43.72 Aligned_cols=48 Identities=15% Similarity=0.277 Sum_probs=40.0
Q ss_pred cCCCCHHHHHHHHHHHh---CCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 923 PSFASRIQALRYLSIRW---GIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 923 p~gasKg~AL~~L~~~~---gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
|.+.-||..|+.+.... |++-++++. |||+.| ||-.+++--..-+||.
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviY-iGDG~n-D~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIY-IGDGRN-DFCPALRLRPRDVVFP 196 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEE-ECCCCC-CcCcccccCCCCEEec
Confidence 56678999999999884 777788888 499999 9889988666677877
No 340
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=72.81 E-value=14 Score=35.74 Aligned_cols=41 Identities=17% Similarity=0.098 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHh-CCCCCCEEEEeCC-CCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRW-GIDLSKMVVFVGE-KGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~-gi~~~~vvafiGD-s~N~D~~~Ml~~ag~gVa 970 (1024)
.|...+.++++++ ++++++++.+ || ..+ | +.+-+.+|...+
T Consensus 86 P~~~~~~~~~~~~~~~~~~~~v~I-GD~~~~-D-i~~A~~~Gi~~i 128 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPEESVYV-GDQDLT-D-LQAAKRAGLAFI 128 (132)
T ss_pred CChHHHHHHHHHcCCCChhheEEE-cCCCcc-c-HHHHHHCCCeEE
Confidence 3678999999999 5999999996 99 688 9 999988887544
No 341
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=72.68 E-value=3.6 Score=43.71 Aligned_cols=38 Identities=16% Similarity=0.115 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
..|..+++.+. ...++++++ ||+.| | +.|++.++..+|
T Consensus 143 ~~K~~~l~~~~----~~~~~~i~i-GDg~~-D-~~~a~~Ad~~~a 180 (214)
T TIGR03333 143 CCKPSLIRKLS----EPNDYHIVI-GDSVT-D-VEAAKQSDLCFA 180 (214)
T ss_pred CCHHHHHHHHh----hcCCcEEEE-eCCHH-H-HHHHHhCCeeEe
Confidence 45888887654 356778885 99999 9 999999998555
No 342
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=71.77 E-value=15 Score=48.10 Aligned_cols=39 Identities=10% Similarity=0.241 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+.+.+-+.|.+|++. ||++-+.||--.+.+..+.-++++
T Consensus 652 LQdgVPetI~~L~~A----GIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 652 LQDGVPETIAKLAQA----GIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred hccCchHHHHHHHHc----CCEEEEEcCcHHHHHHHHHHhhcC
Confidence 334444777777776 999999999999999998888776
No 343
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=71.68 E-value=6.9 Score=40.41 Aligned_cols=56 Identities=9% Similarity=0.035 Sum_probs=38.2
Q ss_pred EEEEecCCCCCCCch---------hhHHHHHHHHHHHhhccCCCCeEEEEECC-----CCHHH----------HHHHHHh
Q 001705 751 VIAADCYDSDGNTTE---------TFQATIKNVMKAAGLSLGLGRVGFILVTG-----SSLGE----------TMEAIRR 806 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~---------~i~~~~~~~l~~l~~~~~~~gi~~viaTG-----R~~~~----------~~~~l~~ 806 (1024)
+|++|-|||+..+.. ...+.+.+++.++++. |..+|++|= |.+.. +...|++
T Consensus 7 ~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~----gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~ 82 (181)
T COG0241 7 ALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA----GYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS 82 (181)
T ss_pred EEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC----CCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH
Confidence 455899999554322 3456788999999876 999999984 54432 4455666
Q ss_pred cCCC
Q 001705 807 CTVN 810 (1024)
Q Consensus 807 ~~i~ 810 (1024)
.|+.
T Consensus 83 ~gv~ 86 (181)
T COG0241 83 QGVK 86 (181)
T ss_pred cCCc
Confidence 6653
No 344
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=71.22 E-value=6.5 Score=41.34 Aligned_cols=54 Identities=28% Similarity=0.334 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC-Cce-EEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL-HKT-LILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a-g~g-VaMgna~~NA~~elk~~ad 987 (1024)
-|+.-++-+|+.-+++.+ .++ +|||-. | .+||+.+ |.| +|+. . |+.+-.++.||
T Consensus 191 ~ka~i~e~~~ele~~d~s-a~~-VGDSIt-D-v~ml~~~rgrGglAva--F-NGNeYal~eAd 246 (315)
T COG4030 191 EKAKIMEGYCELEGIDFS-AVV-VGDSIT-D-VKMLEAARGRGGLAVA--F-NGNEYALKEAD 246 (315)
T ss_pred chhHHHHHHHhhcCCCcc-eeE-ecCccc-c-hHHHHHhhccCceEEE--e-cCCcccccccc
Confidence 367778888888888877 555 599999 9 9999965 444 5554 3 77777777777
No 345
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=70.85 E-value=4.1 Score=42.74 Aligned_cols=41 Identities=10% Similarity=0.003 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.+...+..+++++|+++++++++ ||+.+ | +.+-+.+|..++
T Consensus 132 P~~~~~~~~~~~~~~~~~~~l~i-gD~~~-D-i~aA~~~Gi~~i 172 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPEDAVMV-GDAVT-D-LASARAAGTATV 172 (205)
T ss_pred CChHHHHHHHHHcCCChhheEEE-cCCHH-H-HHHHHHcCCeEE
Confidence 36788999999999999999996 99999 9 999999998654
No 346
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=69.91 E-value=12 Score=37.68 Aligned_cols=36 Identities=8% Similarity=-0.022 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+.+.+.|+++.+ +..++|.|.-+...+..+++.++.
T Consensus 61 Pgv~efL~~l~~-----~yel~I~T~~~~~yA~~vl~~ldp 96 (156)
T TIGR02250 61 PFLHEFLKEASK-----LYEMHVYTMGTRAYAQAIAKLIDP 96 (156)
T ss_pred CCHHHHHHHHHh-----hcEEEEEeCCcHHHHHHHHHHhCc
Confidence 356667777663 567777777777777777777554
No 347
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=69.58 E-value=11 Score=41.69 Aligned_cols=59 Identities=15% Similarity=0.091 Sum_probs=40.3
Q ss_pred CCHHHHHH-HHHHHhC--CCCCCEEEEeCCCCCCChHHhhcCCC---ceEEecCCCCCChHHHhcccc
Q 001705 926 ASRIQALR-YLSIRWG--IDLSKMVVFVGEKGDTDYEDLLVGLH---KTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 926 asKg~AL~-~L~~~~g--i~~~~vvafiGDs~N~D~~~Ml~~ag---~gVaMgna~~NA~~elk~~ad 987 (1024)
.+|..++. ..+++++ ++++++|++ ||+.| | +.|..++. .-+-.|=..+|..+.+.+.-+
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~v-GDs~~-D-l~ma~g~~~~~~~l~igfln~~~e~~l~~y~~ 255 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIILL-GDSQG-D-LRMADGVANVEHILKIGYLNDRVDELLEKYMD 255 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEEE-CcChh-h-hhHhcCCCcccceEEEEecccCHHHHHHHHHH
Confidence 57777666 6889998 899999996 99999 9 99988772 233333223344444444433
No 348
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=69.21 E-value=9.4 Score=39.03 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT 808 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~ 808 (1024)
+.|..++.+++++++ ++.|++.||=+-..+.++|+.+.
T Consensus 74 Idp~fKef~e~ike~----di~fiVvSsGm~~fI~~lfe~iv 111 (220)
T COG4359 74 IDPGFKEFVEWIKEH----DIPFIVVSSGMDPFIYPLFEGIV 111 (220)
T ss_pred cCccHHHHHHHHHHc----CCCEEEEeCCCchHHHHHHHhhc
Confidence 445566777777777 77766666666667777877754
No 349
>PLN02207 UDP-glycosyltransferase
Probab=68.36 E-value=25 Score=42.15 Aligned_cols=133 Identities=15% Similarity=0.192 Sum_probs=74.0
Q ss_pred CCcEEEEEeCCC--CCCCHHHHHHHHhhccccCCCCcEEEEEecCCC-cc-cccccchHHHHHHHHHHHHcCCCCCEEeC
Q 001705 476 HKPTILALSRPD--PKKNVTTLLKAFGECQPLRELANMTLILGNRDD-IE-DMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 476 ~~~~Il~vgRld--~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~-~~-~l~~~~~~~~~~i~~~i~~~~l~~~V~~~ 551 (1024)
+..+.+++|... +.+-+..++.+++.+. . .+..++.+... .. .+. + ...++. .+++.+.
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~~lp-------~---~f~er~--~~~g~i~ 337 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDDLLP-------E---GFLDRV--SGRGMIC 337 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccccCC-------H---HHHhhc--CCCeEEE
Confidence 456777788654 2345667777777662 1 34335543110 00 000 1 111111 2455556
Q ss_pred CCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hh-hhccCCcEEEeC--------
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGP----VD-ILKALNNGLLVD-------- 618 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~----~e-ii~~~~~Gllv~-------- 618 (1024)
++.||.++. +.. ..+.||.- -|+ .+++||+.+|+|+|+-...+= .. ++...+.|+-+.
T Consensus 338 ~W~PQ~~IL---~H~--~vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 338 GWSPQVEIL---AHK--AVGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred EeCCHHHHh---ccc--ccceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 898887644 443 11456632 233 577999999999999764332 22 233245566441
Q ss_pred -CCCHHHHHHHHHHHHh
Q 001705 619 -PHDQNAIADALLKLLA 634 (1024)
Q Consensus 619 -p~d~~~la~aI~~ll~ 634 (1024)
.-+.++++++|.+++.
T Consensus 409 ~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 409 EIVNANEIETAIRCVMN 425 (468)
T ss_pred CcccHHHHHHHHHHHHh
Confidence 1267899999999996
No 350
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=66.88 E-value=8.5 Score=39.03 Aligned_cols=73 Identities=18% Similarity=0.100 Sum_probs=48.8
Q ss_pred HHHHHHHhcCCeEE-EEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 896 NIRQRLRMRGFRCN-LVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 896 el~~~L~~~~~~~~-v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+.+.+...+..+. +++|... .-+-....--|...+.++++++++++++++++ ||+.+ | +++-+.+|..++.=
T Consensus 73 ~~~~~l~~~gl~fd~ii~~~~~-~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~I-GD~~~-D-i~~A~~aGi~~i~~ 146 (161)
T TIGR01261 73 LMLQIFRSQGIIFDDVLICPHF-PDDNCDCRKPKIKLLEPYLKKNLIDKARSYVI-GDRET-D-MQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHCCCceeEEEECCCC-CCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEE-eCCHH-H-HHHHHHCCCeEEEE
Confidence 44555666665553 3344100 00111222346688999999999999999996 99999 9 99999999876654
No 351
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=66.09 E-value=7 Score=39.21 Aligned_cols=53 Identities=6% Similarity=0.063 Sum_probs=37.6
Q ss_pred EEEEecCCCCCCCch-------------------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC
Q 001705 751 VIAADCYDSDGNTTE-------------------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT 808 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~-------------------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~ 808 (1024)
++++|+||||..... ..-+.+.+.|+.+.+ ...++|.|..+..-+..+++.+.
T Consensus 2 ~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~-----~~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 2 TLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK-----HYEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH-----HCEEEEE-SS-HHHHHHHHHHHT
T ss_pred EEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH-----hceEEEEEeehhhhhhHHHHhhh
Confidence 455999999665321 145778899998865 57899999999999999998865
No 352
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=65.42 E-value=11 Score=37.44 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
--+...+.++++++|+++++++.+ ||+.. | ++.=+.+|...++
T Consensus 101 KP~~~~~~~~~~~~~~~~~e~i~I-GDs~~-D-i~~A~~~Gi~~v~ 143 (147)
T TIGR01656 101 KPKPGLILEALKRLGVDASRSLVV-GDRLR-D-LQAARNAGLAAVL 143 (147)
T ss_pred CCCHHHHHHHHHHcCCChHHEEEE-cCCHH-H-HHHHHHCCCCEEE
Confidence 347788999999999999999996 99988 9 8887888875543
No 353
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=65.14 E-value=10 Score=41.33 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~n 821 (1024)
+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. ..||.+||..
T Consensus 111 pgv~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~ 158 (248)
T PLN02770 111 NGLYKLKKWIEDR----GLKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGS 158 (248)
T ss_pred ccHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecC
Confidence 4567888899887 9999999999999999999999985 4578887755
No 354
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=64.87 E-value=8.4 Score=40.26 Aligned_cols=33 Identities=3% Similarity=-0.046 Sum_probs=23.6
Q ss_pred HHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 773 NVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 773 ~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
++|+.+++ . +.++|+|+.....+..+++.++++
T Consensus 75 e~L~~L~~----~-~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 75 EFLDWLRE----R-FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred HHHHHHHh----c-CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 44555543 2 578888888888888888887774
No 355
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=64.53 E-value=12 Score=38.16 Aligned_cols=41 Identities=5% Similarity=-0.005 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
-+...+++.+++++++++++++| ||+.+ | +..=+.+|..++
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~v-gD~~~-d-i~aA~~aG~~~i 182 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIGI-EDAQA-G-IEAIKAAGMFAV 182 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEEE-ecCHH-H-HHHHHHcCCEEE
Confidence 46778899999999999999996 99999 9 999888887543
No 356
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=63.85 E-value=47 Score=39.86 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=49.9
Q ss_pred CCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC-cEEEcCC--CCchhhhccCCcEEEeCCCCHHHHHHHHHHH
Q 001705 556 QSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL-PVVATKN--GGPVDILKALNNGLLVDPHDQNAIADALLKL 632 (1024)
Q Consensus 556 ~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~-PVVat~~--Gg~~eii~~~~~Gllv~p~d~~~la~aI~~l 632 (1024)
...+.++++.+ -.++.|+-.++..-.+.||+.+|| |||.++. ....+.+.-..-++.++ .+++-+.|.+.
T Consensus 334 ~~~y~~~m~~S----~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~i 406 (464)
T KOG1021|consen 334 PLNYMEGMQDS----KFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNI 406 (464)
T ss_pred cchHHHHhhcC----eEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHH
Confidence 46778888988 688899989999999999999996 9999884 33344443334566664 34444444444
Q ss_pred Hh
Q 001705 633 LA 634 (1024)
Q Consensus 633 l~ 634 (1024)
|.
T Consensus 407 L~ 408 (464)
T KOG1021|consen 407 LL 408 (464)
T ss_pred HH
Confidence 43
No 357
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=63.82 E-value=44 Score=40.35 Aligned_cols=152 Identities=17% Similarity=0.150 Sum_probs=94.9
Q ss_pred CCcEEEEEeCCCC-CCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001705 476 HKPTILALSRPDP-KKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHH 554 (1024)
Q Consensus 476 ~~~~Il~vgRld~-~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~ 554 (1024)
.+++-+..|.-++ .||-+..++++.+.. .+. |+..+... ....+..-|.=+|.+
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~------eih---~tV~~~~~----------------~~~~~P~~V~NHG~l 330 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM------EIH---GTVYDEPQ----------------RPPNVPSFVKNHGIL 330 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc------EEE---EEeccCCC----------------CCcccchhhhhcCcC
Confidence 4556666676554 677788887776542 222 32222111 111233446667888
Q ss_pred CCCCHHHHHHHhhcCCcEEEecCC-CCCCCHHHHHHHHcCCcEEEcCCCCch---------------hhh---------c
Q 001705 555 KQSDVPDIYRLAAKTKGVFINPAL-VEPFGLTIIEAAAYGLPVVATKNGGPV---------------DIL---------K 609 (1024)
Q Consensus 555 ~~~el~~ly~~A~~~~dv~v~ps~-~Egfgl~llEAmA~G~PVVat~~Gg~~---------------eii---------~ 609 (1024)
++.|+..+++.+ -|||-.-. +| |=+.+||+|.|+|.|-...-.+. ++- .
T Consensus 331 ~~~ef~~lL~~a----kvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 331 SGDEFQQLLRKA----KVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred CHHHHHHHHHhh----hEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 999999999999 68884422 23 45689999999988876643221 111 1
Q ss_pred cCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 001705 610 ALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 610 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~-~~fsw~~~a~~~l~~~~ 667 (1024)
....-+.|+-+|.+++.+||.++++.+- --++ -.|+-+.+.++....++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHH
Confidence 1234688899999999999999998752 1233 35666655555544443
No 358
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=63.74 E-value=6.9 Score=40.26 Aligned_cols=40 Identities=10% Similarity=0.039 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
+-..+.+.++++|++++++++| ||+.. | ++.=+.+|..++
T Consensus 144 ~p~~~~~~~~~~~~~~~~~l~i-gDs~~-d-i~aA~~aG~~~i 183 (188)
T PRK10725 144 APDTFLRCAQLMGVQPTQCVVF-EDADF-G-IQAARAAGMDAV 183 (188)
T ss_pred ChHHHHHHHHHcCCCHHHeEEE-eccHh-h-HHHHHHCCCEEE
Confidence 5567999999999999999996 99999 9 888888887543
No 359
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=63.69 E-value=9.8 Score=40.58 Aligned_cols=46 Identities=20% Similarity=0.191 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|.+|++. |+.++|+|+++...+..+++.+|+. ..|+.++|
T Consensus 92 ~gv~e~L~~L~~~----g~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g 137 (220)
T COG0546 92 PGVKELLAALKSA----GYKLGIVTNKPERELDILLKALGLA-DYFDVIVG 137 (220)
T ss_pred CCHHHHHHHHHhC----CCeEEEEeCCcHHHHHHHHHHhCCc-cccceEEc
Confidence 5567899999987 9999999999999999999999986 46777777
No 360
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=63.51 E-value=12 Score=38.96 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=37.3
Q ss_pred HHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 771 IKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 771 ~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
..++|+.|+++ |+.++|+||.+...+...++.+|+. ..|+.+++.
T Consensus 111 ~~~~L~~l~~~----g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~ 155 (197)
T TIGR01548 111 PKGLLRELHRA----PKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWM 155 (197)
T ss_pred HHHHHHHHHHc----CCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEee
Confidence 36888888876 9999999999999999999999985 456666663
No 361
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=63.46 E-value=5.8 Score=42.25 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 926 ASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
..|..+++ +++.+.++++++ ||+.+ | +.|.+.+|..+|
T Consensus 147 ~~K~~~l~----~~~~~~~~~i~i-GDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 147 CCKPSLIR----KLSDTNDFHIVI-GDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred CchHHHHH----HhccCCCCEEEE-eCCHH-H-HHHHHHCCccee
Confidence 34776665 457788899996 99999 9 999999988555
No 362
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=62.46 E-value=2.9e+02 Score=31.76 Aligned_cols=117 Identities=21% Similarity=0.334 Sum_probs=84.6
Q ss_pred HHHHHHcCC--CCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhccCCc
Q 001705 536 LKLIDKYDL--YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNN 613 (1024)
Q Consensus 536 ~~~i~~~~l--~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~~ 613 (1024)
..++..+++ .+...|-|.+ +++.+++.-. |++|.--+--+.+..-.|++--|=|.|-.. .++. +.
T Consensus 241 ~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~ 307 (364)
T PF10933_consen 241 VNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DV 307 (364)
T ss_pred HHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--cc
Confidence 344455554 4567777774 6778887764 999888777899999999999999998742 2332 25
Q ss_pred EEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHhcCCH--HHHHHHHHHH
Q 001705 614 GLLVDPHDQNAIADALLKLLA-DKNMWSECRKNGLKNIHRFSW--PEHCRNYLSH 665 (1024)
Q Consensus 614 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~~~~fsw--~~~a~~~l~~ 665 (1024)
|+..+..|..+=+++|.+++. ....++.+++++++.+..++. +..+..|.+.
T Consensus 308 GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~ 362 (364)
T PF10933_consen 308 GYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEAR 362 (364)
T ss_pred CcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHh
Confidence 999999999999999999887 445678888888888754444 3334455444
No 363
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=60.93 E-value=8.1 Score=40.68 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=43.3
Q ss_pred EEecCCCCHHHHHHHHHHHh---CCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 920 NVVPSFASRIQALRYLSIRW---GIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 920 EI~p~gasKg~AL~~L~~~~---gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
..-|.+.-||.-|..+.... |+.-+.++. +||+.| ||-.|+...+.-|||.
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY-vGDG~n-D~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLKDGVRYERLIY-VGDGAN-DFCPVLRLRACDVAMP 209 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhhcCCceeeEEE-EcCCCC-CcCcchhcccCceecc
Confidence 44788889999998887654 788888888 599999 9999999998888887
No 364
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=59.84 E-value=13 Score=39.33 Aligned_cols=46 Identities=15% Similarity=0.176 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|++|+++ |+.++|+||.....+...++.+|+. ..|+.+++
T Consensus 85 ~g~~~~l~~L~~~----g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~ 130 (214)
T PRK13288 85 ETVYETLKTLKKQ----GYKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVIT 130 (214)
T ss_pred cCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEe
Confidence 6677999999987 9999999999999999999999885 34666665
No 365
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=59.05 E-value=7.3 Score=40.56 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHH-------HHHHHHHhc
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLG-------ETMEAIRRC 807 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~-------~~~~~l~~~ 807 (1024)
+...++|++|.+. |...+++|+|+.. ....|+++.
T Consensus 76 ~gA~e~l~~L~~~----g~~~~~Itar~~~~~~~~~~~k~~Wl~~h 117 (191)
T PF06941_consen 76 PGAVEALKKLRDK----GHEIVIITARPPEFPDHSAEEKREWLERH 117 (191)
T ss_dssp TTHHHHHHHHHTS----TTEEEEEEE-SSSSGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCcEEEEEecCccccchHHHHHHHHHHHH
Confidence 4567788888876 7666777777543 556777775
No 366
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=58.81 E-value=8.2 Score=43.02 Aligned_cols=70 Identities=21% Similarity=0.215 Sum_probs=48.3
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCC-cEEEcC--CCCchhhhccCCcEEEeCCCCHHHHHHHHH
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL-PVVATK--NGGPVDILKALNNGLLVDPHDQNAIADALL 630 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~-PVVat~--~Gg~~eii~~~~~Gllv~p~d~~~la~aI~ 630 (1024)
.+..+.++.+ ..++.|.-..++..-++|||++|| |||.++ .=...|++.=....+.|+..+..+|-+.|.
T Consensus 228 ~~~~~~l~~S----~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 228 SEYMELLRNS----KFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred hHHHHhcccC----eEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 3577888888 677887766678899999999996 888765 222344554345577777666655555443
No 367
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=58.71 E-value=13 Score=38.91 Aligned_cols=47 Identities=11% Similarity=0.100 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.|+++ |+.++|+|+.+...+..+++.+++. ..|+.++|+
T Consensus 88 ~g~~~~L~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 134 (213)
T TIGR01449 88 PGVEATLGALRAK----GLRLGLVTNKPTPLARPLLELLGLA-KYFSVLIGG 134 (213)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEec
Confidence 5667888999887 9999999999999999999998885 346766653
No 368
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=57.91 E-value=1.1e+02 Score=35.15 Aligned_cols=104 Identities=12% Similarity=0.093 Sum_probs=58.7
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDPKKNVT--TLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+..+++..|.-.+.|.+. ...+.+..+.+ ....+ +++|+..+ ++ .....+| .+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~v-vl~ggp~e-~e-----~~~~~~i---~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEV-VLTSGPDK-DD-----LACVNEI---AQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeE-EEEcCCCh-HH-----HHHHHHH---HHhcCCCccccccCC
Confidence 345666777655667654 45555555532 22233 34443221 11 0111222 222222234667888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.+-.++.++++.| +++|..- + |.. -=|.|.|+|+|+=.
T Consensus 251 ~sL~el~ali~~a----~l~v~nD---S-Gp~-HlAaA~g~P~v~lf 288 (352)
T PRK10422 251 TTFPELGALIDHA----QLFIGVD---S-APA-HIAAAVNTPLICLF 288 (352)
T ss_pred CCHHHHHHHHHhC----CEEEecC---C-HHH-HHHHHcCCCEEEEE
Confidence 8889999999999 8998652 2 322 23678999999864
No 369
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=57.26 E-value=28 Score=37.28 Aligned_cols=42 Identities=5% Similarity=-0.001 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE--Eec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL--ILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV--aMg 972 (1024)
+.....++++++|++++++++| ||+.+ | +..=+.+|... ++.
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~i-gDs~~-d-i~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFI-DDSEP-I-LDAAAQFGIRYCLGVT 194 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEE-cCCHH-H-HHHHHHcCCeEEEEEe
Confidence 3567899999999999999996 99999 9 88888889853 455
No 370
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=56.64 E-value=23 Score=37.17 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=43.5
Q ss_pred cccceeEEEEEecCCCCCCCc-------hhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 744 GRRQMLIVIAADCYDSDGNTT-------ETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 744 ~~~~rlllIa~DlDGTl~~~~-------~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+..++++| +|+|+||.+.. --.-|.+.+.|+.+.+ ...++|=|..+..-+...+..+++
T Consensus 18 ~~~kklLV--LDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-----~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 18 REGKKLLV--LDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-----DYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCcEEE--EeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-----CCEEEEEecCCHHHHHHHHHHhcc
Confidence 44556665 89999977641 1234677888888876 478888888888888889988765
No 371
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=56.05 E-value=8.1 Score=47.81 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+-+..++.|+.|.+. ++.++..||-+.-.+-...++++|
T Consensus 676 lK~Ds~~~I~el~~S----SH~vvMITGDnpLTAchVak~v~i 714 (1160)
T KOG0209|consen 676 LKPDSKKTIKELNNS----SHRVVMITGDNPLTACHVAKEVGI 714 (1160)
T ss_pred CCccHHHHHHHHhcc----CceEEEEeCCCccchheehheeee
Confidence 446677888888876 899999999999999888888776
No 372
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=55.98 E-value=14 Score=38.67 Aligned_cols=47 Identities=15% Similarity=0.192 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|++|+++ |+.++|+||.+...+...++.+++. ..|+.+++.
T Consensus 78 ~g~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~~l~-~~f~~i~~~ 124 (205)
T TIGR01454 78 PGVPELLAELRAD----GVGTAIATGKSGPRARSLLEALGLL-PLFDHVIGS 124 (205)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHcCCh-hheeeEEec
Confidence 5677899999987 9999999999999999999998884 246666653
No 373
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.91 E-value=29 Score=40.78 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=44.4
Q ss_pred ccceeEEEEEecCCCCCC-----C-----------chhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhc
Q 001705 745 RRQMLIVIAADCYDSDGN-----T-----------TETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRC 807 (1024)
Q Consensus 745 ~~~rlllIa~DlDGTl~~-----~-----------~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~ 807 (1024)
.++|.++ +|+|+||-. + ....-..+++.|+.+.++ |+.++|||=.....+++.+...
T Consensus 220 ~~kK~LV--LDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq----GVlLav~SKN~~~da~evF~kh 292 (574)
T COG3882 220 KSKKALV--LDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ----GVLLAVCSKNTEKDAKEVFRKH 292 (574)
T ss_pred cccceEE--EecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc----cEEEEEecCCchhhHHHHHhhC
Confidence 4555555 899999432 1 123446788999999998 9999999999999999999873
No 374
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=54.30 E-value=10 Score=39.03 Aligned_cols=42 Identities=10% Similarity=-0.100 Sum_probs=28.3
Q ss_pred EEEEecCCCCCCCc---------hhhHHHHHHHHHHHhhccCCCCeEEEEECCCC
Q 001705 751 VIAADCYDSDGNTT---------ETFQATIKNVMKAAGLSLGLGRVGFILVTGSS 796 (1024)
Q Consensus 751 lIa~DlDGTl~~~~---------~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~ 796 (1024)
++.+|.||||.... -.+-+.+.++|++|+++ |+.++|+|..+
T Consensus 5 ~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 5 AIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred EEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 55599999943211 12235567888888876 88888888764
No 375
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=53.33 E-value=16 Score=38.66 Aligned_cols=47 Identities=17% Similarity=0.234 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|++|+++ |+.++|+|+.+...+...++.+++. ..||.++++
T Consensus 97 ~g~~~~L~~L~~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 143 (221)
T TIGR02253 97 PGVRDTLMELRES----GYRLGIITDGLPVKQWEKLERLGVR-DFFDAVITS 143 (221)
T ss_pred CCHHHHHHHHHHC----CCEEEEEeCCchHHHHHHHHhCChH-HhccEEEEe
Confidence 5677899999887 9999999999988899999998885 347777664
No 376
>PRK06769 hypothetical protein; Validated
Probab=52.81 E-value=30 Score=35.43 Aligned_cols=42 Identities=24% Similarity=0.279 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
+...+...++++|+++++++++ ||+.+ | +..=+.+|..++.-
T Consensus 95 ~p~~~~~~~~~l~~~p~~~i~I-GD~~~-D-i~aA~~aGi~~i~v 136 (173)
T PRK06769 95 STGMLLQAAEKHGLDLTQCAVI-GDRWT-D-IVAAAKVNATTILV 136 (173)
T ss_pred CHHHHHHHHHHcCCCHHHeEEE-cCCHH-H-HHHHHHCCCeEEEE
Confidence 4557888889999999999996 99998 9 88888888755533
No 377
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=52.45 E-value=15 Score=36.67 Aligned_cols=46 Identities=13% Similarity=0.345 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|++|+++ |+.++++|+.+...+...++.+++. ..|+.+++
T Consensus 80 ~~~~~~L~~l~~~----~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~ 125 (176)
T PF13419_consen 80 PGVRELLERLKAK----GIPLVIVSNGSRERIERVLERLGLD-DYFDEIIS 125 (176)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEE
T ss_pred hhhhhhhhhcccc----cceeEEeecCCcccccccccccccc-cccccccc
Confidence 5677899999877 9999999999999999999998875 34666655
No 378
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=52.16 E-value=19 Score=39.54 Aligned_cols=46 Identities=9% Similarity=0.097 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|+.|++. |+.++|+|+.+...+...++.+++. ..|+.+++
T Consensus 112 pg~~e~L~~L~~~----g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~ 157 (260)
T PLN03243 112 PGSREFVQALKKH----EIPIAVASTRPRRYLERAIEAVGME-GFFSVVLA 157 (260)
T ss_pred CCHHHHHHHHHHC----CCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEe
Confidence 5677899999887 9999999999999999999998874 34666655
No 379
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=52.04 E-value=9.7 Score=44.80 Aligned_cols=50 Identities=12% Similarity=0.278 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccc
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGED 987 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad 987 (1024)
.|-..++.-... ..+++..||+.| | -+-|..+..|+||- ++.+..|+++.
T Consensus 497 dK~~~I~~eQ~~-----grlVAMtGDGTN-D-APALAqAdVg~AMN----sGTqAAkEAaN 546 (681)
T COG2216 497 DKLALIRQEQAE-----GRLVAMTGDGTN-D-APALAQADVGVAMN----SGTQAAKEAAN 546 (681)
T ss_pred HHHHHHHHHHhc-----CcEEEEcCCCCC-c-chhhhhcchhhhhc----cccHHHHHhhc
Confidence 455555554332 235565699999 9 99999999999999 88888888875
No 380
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=51.87 E-value=3e+02 Score=29.17 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=35.4
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.........+..++.++++.| +++|-..+ -.++=|+++|+|+|+-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~----~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 238 NVIIIDYSLSPDELLELISQA----DLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred ceeEecCCCCHHHHHHHHhcC----CEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 345556677788999999999 88886654 34667899999999854
No 381
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=51.87 E-value=18 Score=42.01 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.|+++ |+.++|+|+.+...+..+++.+|+. ..||.+|+.
T Consensus 219 pGa~ElL~~Lk~~----GiklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~s 265 (381)
T PLN02575 219 TGSQEFVNVLMNY----KIPMALVSTRPRKTLENAIGSIGIR-GFFSVIVAA 265 (381)
T ss_pred cCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEec
Confidence 5667899999887 9999999999999999999999985 457877773
No 382
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=51.87 E-value=12 Score=41.69 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 929 IQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 929 g~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
...+..+++++|++++++++| ||+.+ | +++=+.+|..++.-
T Consensus 205 p~~~~~a~~~~~~~p~~~l~I-GDs~~-D-i~aA~~aG~~~i~v 245 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVV-EDSVI-G-LQAAKAAGMRCIVT 245 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEE-eCCHH-h-HHHHHHcCCEEEEE
Confidence 558899999999999999996 99999 9 99999999876644
No 383
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=51.84 E-value=20 Score=39.01 Aligned_cols=47 Identities=11% Similarity=-0.046 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCC-CEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDF-DAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~-d~lI~~ 820 (1024)
+.+.++|+.|+++ |+.++|+||.+...+..+++.+++. ..| |.+||.
T Consensus 102 pg~~e~L~~L~~~----g~~l~IvT~~~~~~~~~~l~~~gl~-~~f~d~ii~~ 149 (253)
T TIGR01422 102 PGVIEVIAYLRAR----GIKIGSTTGYTREMMDVVAPEAALQ-GYRPDYNVTT 149 (253)
T ss_pred CCHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHHHHhc-CCCCceEEcc
Confidence 5566888999887 9999999999999999999988874 223 666663
No 384
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=51.32 E-value=39 Score=34.51 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=27.5
Q ss_pred hHHHHHHHHHhcCCeEEEEEecCCeEEEEecCCCCH------HHHHHHHHHHhCCCCCCEEE
Q 001705 893 KVDNIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASR------IQALRYLSIRWGIDLSKMVV 948 (1024)
Q Consensus 893 ~~~el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasK------g~AL~~L~~~~gi~~~~vva 948 (1024)
-+.++.+.|+..+..+-++.+.+. . .-....+ ..-+..++...++..+.++.
T Consensus 30 gv~e~L~~Lk~~G~~l~i~TN~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 87 (176)
T TIGR00213 30 GVIDALRELKKMGYALVLVTNQSG-I---ARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYY 87 (176)
T ss_pred CHHHHHHHHHHCCCEEEEEeCCcc-c---cCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEE
Confidence 355777778777766655555542 0 0000111 23344566667777666654
No 385
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=50.76 E-value=37 Score=36.72 Aligned_cols=48 Identities=10% Similarity=0.168 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 770 TIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 770 ~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
..+++++.+.++ ..|+.++|.|-=.-..+..+|+..|+. .-|+-++++
T Consensus 75 gm~~~l~~l~~~--~~~~~~~IiSDaNs~fI~~iL~~~gl~-~~f~~I~TN 122 (234)
T PF06888_consen 75 GMKELLRFLAKN--QRGFDLIIISDANSFFIETILEHHGLR-DCFSEIFTN 122 (234)
T ss_pred cHHHHHHHHHhc--CCCceEEEEeCCcHhHHHHHHHhCCCc-cccceEEeC
Confidence 344555555321 137888888888888888888888885 235555553
No 386
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=50.47 E-value=22 Score=37.74 Aligned_cols=48 Identities=13% Similarity=0.177 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
-+.+.++|+.++++ |+.++|+|+.+...+..+++.+++. ..|+.++|.
T Consensus 94 ~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~ 141 (222)
T PRK10826 94 LPGVREALALCKAQ----GLKIGLASASPLHMLEAVLTMFDLR-DYFDALASA 141 (222)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEc
Confidence 36677999999987 9999999999999999999998885 457776664
No 387
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=49.95 E-value=18 Score=37.14 Aligned_cols=40 Identities=15% Similarity=0.152 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
+-....++++++|+++++++++ ||+.. | +..=+.+|..++
T Consensus 143 ~p~~~~~~~~~~~~~~~~~l~v-gD~~~-d-i~aA~~~G~~~i 182 (184)
T TIGR01993 143 SPQAYEKALREAGVDPERAIFF-DDSAR-N-IAAAKALGMKTV 182 (184)
T ss_pred CHHHHHHHHHHhCCCccceEEE-eCCHH-H-HHHHHHcCCEEe
Confidence 4568899999999999999986 99988 8 877777887654
No 388
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=48.38 E-value=24 Score=36.66 Aligned_cols=46 Identities=11% Similarity=0.237 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|++|+++ |+.++|+|+-+...+...++.+|+. ..||.+++
T Consensus 95 ~~~~~~L~~L~~~----g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~ 140 (198)
T TIGR01428 95 PDVPAGLRALKER----GYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLS 140 (198)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEe
Confidence 5566889999887 9999999999999999999998874 23555554
No 389
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=47.99 E-value=19 Score=36.81 Aligned_cols=45 Identities=22% Similarity=0.228 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
-+.+.++|++|++. |+.++++|+. ..+...++.+++. ..|+.+++
T Consensus 90 ~~g~~~~l~~l~~~----g~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~ 134 (185)
T TIGR02009 90 LPGIENFLKRLKKK----GIAVGLGSSS--KNADRILAKLGLT-DYFDAIVD 134 (185)
T ss_pred CcCHHHHHHHHHHc----CCeEEEEeCc--hhHHHHHHHcChH-HHCCEeee
Confidence 36677889999887 9999999998 6678888888874 23555544
No 390
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=47.61 E-value=94 Score=35.23 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=57.2
Q ss_pred CCCcE-EEEEeC-CCCCCCHH--HHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe
Q 001705 475 PHKPT-ILALSR-PDPKKNVT--TLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY 550 (1024)
Q Consensus 475 ~~~~~-Il~vgR-ld~~Kgi~--~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~ 550 (1024)
+++++ ++..|. ..+.|.+. ...+....+.+ ....+ +++|+..+. +...+|.. ..+ ...+.+
T Consensus 172 ~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~i-vl~G~~~e~--------~~~~~i~~---~~~-~~~~~l 236 (334)
T TIGR02195 172 TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQV-VLFGSAKDH--------PAGNEIEA---LLP-GELRNL 236 (334)
T ss_pred CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEE-EEEEChhhH--------HHHHHHHH---hCC-cccccC
Confidence 34454 455554 34666554 55566665532 22233 455654331 11222322 211 123446
Q ss_pred CCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 551 PKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 551 ~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.|..+-.++..+++.| |++|..- + |. +-=|.|.|+|+|+=.
T Consensus 237 ~g~~sL~el~ali~~a----~l~I~~D---S-Gp-~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 237 AGETSLDEAVDLIALA----KAVVTND---S-GL-MHVAAALNRPLVALY 277 (334)
T ss_pred CCCCCHHHHHHHHHhC----CEEEeeC---C-HH-HHHHHHcCCCEEEEE
Confidence 7888888999999999 8998652 2 22 223678999999853
No 391
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=47.34 E-value=31 Score=36.48 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
.+.+.++++.+++. |+.++|+||.....+..+++.+++. ..|+.+++
T Consensus 95 ~~g~~~~l~~l~~~----g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~ 141 (226)
T PRK13222 95 YPGVKETLAALKAA----GYPLAVVTNKPTPFVAPLLEALGIA-DYFSVVIG 141 (226)
T ss_pred CCCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCc-cCccEEEc
Confidence 36677999999887 9999999999999999999998884 33565554
No 392
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=47.23 E-value=14 Score=41.34 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=19.5
Q ss_pred eEEEEEecCCCCCCCc-hhhHHHHHHHHHH
Q 001705 749 LIVIAADCYDSDGNTT-ETFQATIKNVMKA 777 (1024)
Q Consensus 749 lllIa~DlDGTl~~~~-~~i~~~~~~~l~~ 777 (1024)
+-.|.||+||||.++. ........++++.
T Consensus 40 ~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~ 69 (286)
T PLN02779 40 PEALLFDCDGVLVETERDGHRVAFNDAFKE 69 (286)
T ss_pred CcEEEEeCceeEEccccHHHHHHHHHHHHH
Confidence 4455599999999886 4445555555543
No 393
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=46.83 E-value=17 Score=38.50 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCCC-CCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 928 RIQALRYLSIRWGID-LSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~-~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
+...+.++++++|++ ++++++| ||+.+ | +.+=+.+|..++
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~i-gD~~~-D-i~aa~~aG~~~~ 187 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVA-GDTPN-D-LEAGINAGAGAV 187 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEe-CCCHH-H-HHHHHHCCCCeE
Confidence 568899999999997 7999996 99999 9 999999999873
No 394
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=46.63 E-value=41 Score=36.94 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
+...+...++++|++++++++| ||+.+ | +..=+.+|..++.
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~I-gDs~~-D-i~aA~~aG~~~i~ 207 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVF-GNSNS-S-VEAAHDGCMKCVA 207 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEE-cCCHH-H-HHHHHHcCCEEEE
Confidence 4567889999999999999996 99999 9 8888889976543
No 395
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=45.35 E-value=13 Score=36.97 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
.+..+.+.+++++|+++++++++ ||+.. | +.+=+.+|...+
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~v-gD~~~-d-~~~A~~~G~~~i 174 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILFV-GDSPS-D-VEAAKEAGIKTI 174 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEEE-ESSHH-H-HHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHcCCCcceEEEE-eCCHH-H-HHHHHHcCCeEE
Confidence 45688999999999999999886 99998 9 999888887654
No 396
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=45.04 E-value=53 Score=33.23 Aligned_cols=36 Identities=6% Similarity=0.016 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+.+.+.|+++.+ ...++|.|.-+...+..+++.++.
T Consensus 45 Pgl~eFL~~l~~-----~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 45 PHVDEFLERVSK-----WYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CCHHHHHHHHHh-----cCEEEEEcCCcHHHHHHHHHHHCc
Confidence 567888888875 478888888888888999988664
No 397
>PRK11587 putative phosphatase; Provisional
Probab=44.99 E-value=25 Score=37.31 Aligned_cols=42 Identities=10% Similarity=-0.050 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
+.......++++|++++++++| ||+.+ | +..=+.+|. +|++.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~i-gDs~~-d-i~aA~~aG~~~i~v~ 182 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVV-EDAPA-G-VLSGLAAGCHVIAVN 182 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEE-ecchh-h-hHHHHHCCCEEEEEC
Confidence 4567788889999999999996 99999 9 888888886 45665
No 398
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=44.98 E-value=29 Score=38.51 Aligned_cols=46 Identities=7% Similarity=0.122 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|++|+++ |+.++|+|+.+...+...++.+|+. ..|+.+++
T Consensus 145 pg~~e~L~~L~~~----gi~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~ 190 (273)
T PRK13225 145 PGVADLLAQLRSR----SLCLGILSSNSRQNIEAFLQRQGLR-SLFSVVQA 190 (273)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCh-hheEEEEe
Confidence 5677999999887 9999999999999999999999885 34665544
No 399
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=44.96 E-value=23 Score=34.40 Aligned_cols=52 Identities=8% Similarity=0.105 Sum_probs=41.8
Q ss_pred EEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 753 AADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 753 a~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+-|.++|+-.. ..+-+++.+.|++|.+. +.++||||-...++...++-.|++
T Consensus 18 ~~~v~~tiatg-Gklf~ev~e~iqeL~d~-----V~i~IASgDr~gsl~~lae~~gi~ 69 (152)
T COG4087 18 AGKVLYTIATG-GKLFSEVSETIQELHDM-----VDIYIASGDRKGSLVQLAEFVGIP 69 (152)
T ss_pred cceEEEEEccC-cEEcHhhHHHHHHHHHh-----heEEEecCCcchHHHHHHHHcCCc
Confidence 34566664433 45667888999999873 899999999999999999998885
No 400
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=44.70 E-value=19 Score=37.44 Aligned_cols=42 Identities=7% Similarity=-0.103 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
+....+++++++|+++++++.+ ||+.+ | +..=+.+|...+.=
T Consensus 150 ~~~~~~~~~~~~~~~p~~~~~v-gD~~~-D-i~~A~~~G~~~i~v 191 (198)
T TIGR01428 150 APQVYQLALEALGVPPDEVLFV-ASNPW-D-LGGAKKFGFKTAWV 191 (198)
T ss_pred CHHHHHHHHHHhCCChhhEEEE-eCCHH-H-HHHHHHCCCcEEEe
Confidence 3677899999999999999986 99998 9 88888888765543
No 401
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=44.67 E-value=19 Score=43.40 Aligned_cols=41 Identities=15% Similarity=0.247 Sum_probs=33.1
Q ss_pred CCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 925 FASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 925 gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
|..|..+|+ +.+|.+... +++ ||+.+ | .+||+.++.++++.
T Consensus 174 Ge~Kv~rl~---~~~g~~~~~-~aY-gDS~s-D-~plL~~a~e~y~V~ 214 (497)
T PLN02177 174 GDHKRDAVL---KEFGDALPD-LGL-GDRET-D-HDFMSICKEGYMVP 214 (497)
T ss_pred cHHHHHHHH---HHhCCCCce-EEE-ECCcc-H-HHHHHhCCccEEeC
Confidence 334777776 556766666 787 99999 9 99999999999999
No 402
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=44.25 E-value=24 Score=35.11 Aligned_cols=34 Identities=15% Similarity=0.021 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCce
Q 001705 932 LRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKT 968 (1024)
Q Consensus 932 L~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~g 968 (1024)
+.+.++++|.+++++++| ||+.+ | ..+-..+|+.
T Consensus 104 ~~k~l~~l~~~p~~~i~i-~Ds~~-~-~~aa~~ngI~ 137 (148)
T smart00577 104 YVKDLSLLGRDLSNVIII-DDSPD-S-WPFHPENLIP 137 (148)
T ss_pred EeecHHHcCCChhcEEEE-ECCHH-H-hhcCccCEEE
Confidence 566678889999999997 99999 8 6665444433
No 403
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=43.99 E-value=4.6e+02 Score=31.42 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=52.6
Q ss_pred CcEEEecCCC-CCCCHHHHHHHHc---CCcEEE-cCCCCc---hhhhccCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001705 570 KGVFINPALV-EPFGLTIIEAAAY---GLPVVA-TKNGGP---VDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSE 641 (1024)
Q Consensus 570 ~dv~v~ps~~-Egfgl~llEAmA~---G~PVVa-t~~Gg~---~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 641 (1024)
.|+++.--.. +.-|+.+++.+.. ++|||. |..|.+ ++-++.|..-++..|-+++.+...+.++++...+..+
T Consensus 49 ~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~~~~~~e 128 (464)
T COG2204 49 FDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELRELQRE 128 (464)
T ss_pred CCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHHHhhhhhh
Confidence 4676654333 4557888877776 789876 666664 4455566677899999999999999999987665444
Q ss_pred H
Q 001705 642 C 642 (1024)
Q Consensus 642 ~ 642 (1024)
.
T Consensus 129 ~ 129 (464)
T COG2204 129 N 129 (464)
T ss_pred h
Confidence 3
No 404
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=43.90 E-value=25 Score=35.57 Aligned_cols=39 Identities=3% Similarity=-0.023 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEE
Q 001705 929 IQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLI 970 (1024)
Q Consensus 929 g~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVa 970 (1024)
....+.+++++|++++++++| ||+.. | +.+=+.+|...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~v-gD~~~-d-i~aA~~~G~~~i 181 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFV-DDSPA-G-IEAAKAAGMHTV 181 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEE-cCCHH-H-HHHHHHcCCEEE
Confidence 678899999999999999996 99999 9 888888887544
No 405
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=43.89 E-value=34 Score=36.65 Aligned_cols=47 Identities=4% Similarity=0.003 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|++|+++ |+.++|+|+.+...+...++.+++. ..|+.+++.
T Consensus 98 pg~~~~L~~L~~~----g~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~ 144 (229)
T PRK13226 98 DGVEGMLQRLECA----GCVWGIVTNKPEYLARLILPQLGWE-QRCAVLIGG 144 (229)
T ss_pred CCHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCch-hcccEEEec
Confidence 5566888888887 9999999999999998899998875 346766663
No 406
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=43.73 E-value=75 Score=34.98 Aligned_cols=99 Identities=15% Similarity=0.152 Sum_probs=57.8
Q ss_pred EEEEEeCCCCCCCH--HHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001705 479 TILALSRPDPKKNV--TTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 479 ~Il~vgRld~~Kgi--~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~ 556 (1024)
+++..|.-.+.|.+ +...+.+..+.. ...++ +++|+.++ ......+.+.++-...+.+.|..+-
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~--~~~~i-vl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~~~~l 189 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLA--RGARV-VLTGGPAE-----------RELAEEIAAALGGPRVVNLAGKTSL 189 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHH--CCCEE-EEEechhh-----------HHHHHHHHHhcCCCccccCcCCCCH
Confidence 44555554444543 567777777743 22333 34554332 1222233333322234556777778
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.|+..+++.| |++|.+- . |..-+ |.|.|+|+|+=.
T Consensus 190 ~e~~~li~~~----~l~I~~D---s-g~~Hl-A~a~~~p~i~l~ 224 (279)
T cd03789 190 RELAALLARA----DLVVTND---S-GPMHL-AAALGTPTVALF 224 (279)
T ss_pred HHHHHHHHhC----CEEEeeC---C-HHHHH-HHHcCCCEEEEE
Confidence 8999999999 8999763 2 44444 469999998864
No 407
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=41.90 E-value=32 Score=38.04 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.|+++ |+.++|+||.+...+...++.+++. ..|+.++|.
T Consensus 104 ~g~~e~L~~Lk~~----g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~ 150 (272)
T PRK13223 104 PGVRDTLKWLKKQ----GVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGG 150 (272)
T ss_pred CCHHHHHHHHHHC----CCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEec
Confidence 5677889999887 9999999999999999999998874 346666664
No 408
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=41.66 E-value=36 Score=37.33 Aligned_cols=37 Identities=11% Similarity=0.005 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
+.+.++|+.|+++ |+.++|+||.+...+..+++.+++
T Consensus 104 pg~~elL~~L~~~----g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 104 PGVLEVIAALRAR----GIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCHHHHHHHHHHC----CCEEEEEcCCcHHHHHHHHHHHhh
Confidence 4567889999887 999999999999999989888665
No 409
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=41.34 E-value=22 Score=39.47 Aligned_cols=68 Identities=15% Similarity=-0.006 Sum_probs=42.3
Q ss_pred CCcccceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEEC-C-CCHHH--HHHHHHhcCCC
Q 001705 742 SPGRRQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVT-G-SSLGE--TMEAIRRCTVN 810 (1024)
Q Consensus 742 ~~~~~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaT-G-R~~~~--~~~~l~~~~i~ 810 (1024)
++.....-+-||||+||.|..- +.+.+...++++.|.++...=.|.|++.| | -..+. ++++-..+|+.
T Consensus 28 s~~ss~~~fgfafDIDGVL~RG-~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~ 99 (389)
T KOG1618|consen 28 SFESSPPTFGFAFDIDGVLFRG-HRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE 99 (389)
T ss_pred CCCCCCCceeEEEecccEEEec-CCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence 3445556677889999996654 45566777889988876333356677766 2 22222 44455566665
No 410
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=41.21 E-value=76 Score=33.96 Aligned_cols=43 Identities=7% Similarity=-0.048 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+.....++++++|+++++++.+ ||+.. | ++.=+.+|..++.-
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lfV-gDs~~-D-i~AA~~AG~~ti~v 195 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILFL-SDIIN-E-LDAARKAGLHTGQL 195 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEEE-eCCHH-H-HHHHHHcCCEEEEE
Confidence 35678899999999999999885 99999 9 88888899866544
No 411
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=41.13 E-value=19 Score=36.68 Aligned_cols=39 Identities=10% Similarity=0.019 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceE
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTL 969 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gV 969 (1024)
+...+.++++++|+++++++++ ||+.+ | +++=+.+|..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~I-gD~~~-d-i~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVF-EDALA-G-VQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEE-eCcHh-h-HHHHHHCCCeE
Confidence 4457889999999999999996 99999 9 88888888754
No 412
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=40.87 E-value=35 Score=42.03 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=42.5
Q ss_pred EecCCCC---CCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCC
Q 001705 754 ADCYDSD---GNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTV 809 (1024)
Q Consensus 754 ~DlDGTl---~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i 809 (1024)
++.||++ ..-...+-+..+++|++|++. |+.++++||.+...+..+++.+|+
T Consensus 390 ~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 390 VAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred EEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5666762 111245778899999999987 999999999999999999999887
No 413
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=40.65 E-value=48 Score=40.40 Aligned_cols=72 Identities=8% Similarity=0.142 Sum_probs=47.5
Q ss_pred ceeEEEEEecCCCCCCCch-----------hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHH---HHHHHHhcCCCCC
Q 001705 747 QMLIVIAADCYDSDGNTTE-----------TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGE---TMEAIRRCTVNIE 812 (1024)
Q Consensus 747 ~rlllIa~DlDGTl~~~~~-----------~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~---~~~~l~~~~i~~~ 812 (1024)
.++++ .|+|||+..+|. --...+.++..++.++ |.+++.+|.|++.. .+.+|+.+.
T Consensus 530 ~kIVI--SDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N----GYk~lyLSARaIgQA~~TR~yL~nv~---- 599 (738)
T KOG2116|consen 530 DKIVI--SDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN----GYKILYLSARAIGQADSTRQYLKNVE---- 599 (738)
T ss_pred CcEEE--ecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC----CeeEEEEehhhhhhhHHHHHHHHHHh----
Confidence 34544 999999554321 1235677888888888 99999999998765 556676532
Q ss_pred CCCEEEecCCceEEcCC
Q 001705 813 DFDAIVCNSGSELYFPW 829 (1024)
Q Consensus 813 ~~d~lI~~nGa~I~~~~ 829 (1024)
-|..+.-.|-.|.-|+
T Consensus 600 -QdG~~LPdGPViLSPd 615 (738)
T KOG2116|consen 600 -QDGKKLPDGPVILSPD 615 (738)
T ss_pred -hcCccCCCCCEEeCCC
Confidence 2334445666666654
No 414
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=40.63 E-value=40 Score=34.10 Aligned_cols=46 Identities=13% Similarity=0.231 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|++|++. |+.++|+|+-+... ......+++. ..||.+|++
T Consensus 88 ~g~~~~l~~l~~~----g~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~ 133 (183)
T TIGR01509 88 PGVEPLLEALRAR----GKKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFS 133 (183)
T ss_pred cCHHHHHHHHHHC----CCeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEc
Confidence 6677899999887 99999999998887 5555557774 357888774
No 415
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=40.62 E-value=21 Score=36.16 Aligned_cols=26 Identities=12% Similarity=0.188 Sum_probs=0.0
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHH
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKA 777 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~ 777 (1024)
|.||+||||.+..........+++..
T Consensus 2 viFD~DGTL~D~~~~~~~~~~~~~~~ 27 (175)
T TIGR01493 2 MVFDVYGTLVDVHGGVRACLAAIAPE 27 (175)
T ss_pred eEEecCCcCcccHHHHHHHHHHhhhh
No 416
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=40.40 E-value=22 Score=41.09 Aligned_cols=71 Identities=10% Similarity=0.082 Sum_probs=43.0
Q ss_pred cccceeEEEEEecCCCCCCCchh--h---------HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCC
Q 001705 744 GRRQMLIVIAADCYDSDGNTTET--F---------QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIE 812 (1024)
Q Consensus 744 ~~~~rlllIa~DlDGTl~~~~~~--i---------~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~ 812 (1024)
+..+++++ +|||||+..+|.. + +..+.++.-.+..+ |..+..-|.|++..+..--.- +
T Consensus 372 r~n~kiVV--sDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN----GYkI~YltsR~~Gqa~sTrsy--l--- 440 (580)
T COG5083 372 RNNKKIVV--SDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN----GYKIKYLTSRSYGQADSTRSY--L--- 440 (580)
T ss_pred eCCCcEEE--EecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC----ceEEEEEecccccchhhhhhH--H---
Confidence 44556665 9999997665322 1 12233444444444 899999999988765432222 1
Q ss_pred CCCEEEecCCceEEcC
Q 001705 813 DFDAIVCNSGSELYFP 828 (1024)
Q Consensus 813 ~~d~lI~~nGa~I~~~ 828 (1024)
..||.||..+.++
T Consensus 441 ---rnieQngykLpdg 453 (580)
T COG5083 441 ---RNIEQNGYKLPDG 453 (580)
T ss_pred ---HhhhhcCccCCCC
Confidence 2467788877664
No 417
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=40.32 E-value=34 Score=36.28 Aligned_cols=46 Identities=13% Similarity=0.210 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.+.++|+.++++ |+.++|+||-....+..+++.+ +. .+.++|+
T Consensus 75 l~pG~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~-~~---~~~i~~n 120 (219)
T PRK09552 75 IREGFHEFVQFVKEN----NIPFYVVSGGMDFFVYPLLQGL-IP---KEQIYCN 120 (219)
T ss_pred cCcCHHHHHHHHHHc----CCeEEEECCCcHHHHHHHHHHh-CC---cCcEEEe
Confidence 346777899999887 9999999999999999999997 63 2345554
No 418
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=39.41 E-value=51 Score=32.04 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=30.2
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceE-EEEEec
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYR-VDLLTR 222 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~-V~vlt~ 222 (1024)
|||+++..+ +|+.+-..+..+++|+++...| |+ |.||--
T Consensus 1 m~~~iv~~~------------~Py~~~~~~~al~~A~aa~~~g--h~v~~vFf~ 40 (128)
T PRK00207 1 MRYAIAVTG------------PAYGTQQASSAYQFAQALLAEG--HELVSVFFY 40 (128)
T ss_pred CEEEEEEcC------------CCCCCHHHHHHHHHHHHHHhCC--CCeeEEEEe
Confidence 788888866 3555566788899999999999 98 477744
No 419
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=39.41 E-value=35 Score=36.46 Aligned_cols=47 Identities=13% Similarity=0.136 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.|+++ |+.++|+|+-+...+...++.+++. ..||.+||+
T Consensus 96 ~g~~e~L~~Lk~~----g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s 142 (224)
T PRK14988 96 EDTVPFLEALKAS----GKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLST 142 (224)
T ss_pred CCHHHHHHHHHhC----CCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEe
Confidence 5567899999987 9999999999888898889988874 357777764
No 420
>PRK11590 hypothetical protein; Provisional
Probab=39.19 E-value=46 Score=35.13 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=35.8
Q ss_pred HHHHHHH-HHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecC
Q 001705 769 ATIKNVM-KAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 769 ~~~~~~l-~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~n 821 (1024)
+.+.+.| +.++++ |+.++|+|+.+...+.+++..+++. ..+.+||..
T Consensus 98 pga~e~L~~~l~~~----G~~l~IvSas~~~~~~~il~~l~~~--~~~~~i~t~ 145 (211)
T PRK11590 98 PVVQERLTTYLLSS----DADVWLITGSPQPLVEQVYFDTPWL--PRVNLIASQ 145 (211)
T ss_pred ccHHHHHHHHHHhC----CCEEEEEeCCcHHHHHHHHHHcccc--ccCceEEEE
Confidence 5566778 456665 9999999999999999999998852 234677754
No 421
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=39.15 E-value=48 Score=34.16 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+.++|+.++++ |+.++|+||.....+..+++.+|+.
T Consensus 83 ~g~~e~l~~l~~~----g~~~~IvS~~~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 83 DYAEELVRWLKEK----GLKTAIVSGGIMCLAKKVAEKLNPD 120 (201)
T ss_pred ccHHHHHHHHHHC----CCEEEEEeCCcHHHHHHHHHHhCCC
Confidence 5677899999887 9999999999999999999998874
No 422
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones]
Probab=38.93 E-value=73 Score=35.86 Aligned_cols=95 Identities=19% Similarity=0.193 Sum_probs=72.9
Q ss_pred EEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEecCCCCCChHHHhcccccC
Q 001705 910 LVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILRGSVMYGSEKLLHGEDAF 989 (1024)
Q Consensus 910 v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMgna~~NA~~elk~~ad~~ 989 (1024)
+-.+..+ .|=|=|.|..|--=.+.|++.+++| + ++ - | ..-|..||+ +|--|||--..|+.+|| |
T Consensus 93 vEL~KSN-ILLiGPTGsGKTlLAqTLAk~LnVP---F-ai-A-----D-ATtLTEAGY---VGEDVENillkLlqaad-y 156 (408)
T COG1219 93 VELSKSN-ILLIGPTGSGKTLLAQTLAKILNVP---F-AI-A-----D-ATTLTEAGY---VGEDVENILLKLLQAAD-Y 156 (408)
T ss_pred eeeeecc-EEEECCCCCcHHHHHHHHHHHhCCC---e-ee-c-----c-ccchhhccc---cchhHHHHHHHHHHHcc-c
Confidence 5555655 8899999999999999999999999 3 54 3 5 555777775 56666788888888888 4
Q ss_pred CCC------------CccCCCCCCeeEeccccChhHHHHHHHhc
Q 001705 990 KRE------------DVVPPDSPNIAYIEESYEPQDLSAALKAI 1021 (1024)
Q Consensus 990 ~~~------------~v~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1021 (1024)
-++ |-+..-|.|.. +|-+++-.|+..||-++
T Consensus 157 dV~rAerGIIyIDEIDKIarkSeN~S-ITRDVSGEGVQQALLKi 199 (408)
T COG1219 157 DVERAERGIIYIDEIDKIARKSENPS-ITRDVSGEGVQQALLKI 199 (408)
T ss_pred CHHHHhCCeEEEechhhhhccCCCCC-cccccCchHHHHHHHHH
Confidence 443 55566676766 67899999999999764
No 423
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=37.70 E-value=1.2e+02 Score=31.64 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 929 IQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 929 g~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
.....++++++|+++++++++ ||+.. | +.+=+.+|...+.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i-~D~~~-d-i~aA~~aG~~~i~ 194 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFL-DDLGS-N-LKPAAALGITTIK 194 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEE-cCCHH-H-HHHHHHcCCEEEE
Confidence 557888999999999999996 99999 9 8888888875443
No 424
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=37.64 E-value=24 Score=34.84 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCC
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGL 965 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~a 965 (1024)
.+...+.++++++|+++ +++++ ||+.. | +.+=+.+
T Consensus 119 p~~~~~~~~~~~~~~~~-~~l~i-GDs~~-D-i~aa~~a 153 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP-EVLHV-GDNLN-D-IEGARNA 153 (154)
T ss_pred cCHHHHHHHHHHcCCCC-CEEEE-eCCHH-H-HHHHHHc
Confidence 46788999999999998 98885 99988 8 6654443
No 425
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=37.60 E-value=24 Score=37.37 Aligned_cols=42 Identities=0% Similarity=-0.014 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
+...+...++++|+++++++++ ||+.+ | ++.=+.+|..++.-
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~i-gDs~~-d-i~aA~~aG~~~i~~ 185 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILV-DDSSA-G-AQSGIAAGMEVFYF 185 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEE-eCcHh-h-HHHHHHCCCEEEEE
Confidence 5688999999999999999996 99999 9 88888899888755
No 426
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=37.04 E-value=58 Score=37.31 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhc
Q 001705 768 QATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRC 807 (1024)
Q Consensus 768 ~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~ 807 (1024)
.+.+.++|++++++ |++++|+|+-+...+..+++.+
T Consensus 186 ~pgl~elL~~Lr~~----G~klfLvTNS~~~yt~~im~~l 221 (343)
T TIGR02244 186 DPKLPLFLSKLKEH----GKKLFLLTNSDYDYTDKGMKYL 221 (343)
T ss_pred chhHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHh
Confidence 37788999999987 9999999999999999999985
No 427
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=36.85 E-value=76 Score=35.98 Aligned_cols=42 Identities=7% Similarity=0.131 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
.|...++.+++.+|+++++++.+ ||+.. | +.+-+.+...|-+
T Consensus 87 pk~~~i~~~~~~l~i~~~~~vfi-dD~~~-d-~~~~~~~lp~~~~ 128 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTDSFLFI-DDNPA-E-RANVKITLPVKTL 128 (320)
T ss_pred chHHHHHHHHHHhCCCcCcEEEE-CCCHH-H-HHHHHHHCCCCcc
Confidence 79999999999999999999885 99999 9 8877765554433
No 428
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=35.92 E-value=95 Score=34.60 Aligned_cols=84 Identities=15% Similarity=0.061 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCC---CCCCCHHHHHHHHcCCcEEEcCCCCch
Q 001705 529 SVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAL---VEPFGLTIIEAAAYGLPVVATKNGGPV 605 (1024)
Q Consensus 529 ~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~---~Egfgl~llEAmA~G~PVVat~~Gg~~ 605 (1024)
......+.+.++++++. +....--+.+++...+.......|++++++. ...+...+..+..+++||+++. .
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~----~ 219 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS----D 219 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS----H
T ss_pred HHHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC----H
Confidence 34567788888888874 3333334567888888877777788887753 2333344555666799999975 2
Q ss_pred hhhccCCc-EEEeC
Q 001705 606 DILKALNN-GLLVD 618 (1024)
Q Consensus 606 eii~~~~~-Gllv~ 618 (1024)
..+.+|.- |+.++
T Consensus 220 ~~v~~Gal~~~~~~ 233 (294)
T PF04392_consen 220 FYVKAGALGGYSVD 233 (294)
T ss_dssp HHHCTT-SEEEE--
T ss_pred HHhcCCcEEEEccC
Confidence 44444433 34443
No 429
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]
Probab=35.59 E-value=6.1e+02 Score=29.70 Aligned_cols=163 Identities=17% Similarity=0.135 Sum_probs=90.3
Q ss_pred CCCCcEEEEEeCCCCCC---C-----HHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCC
Q 001705 474 NPHKPTILALSRPDPKK---N-----VTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLY 545 (1024)
Q Consensus 474 ~~~~~~Il~vgRld~~K---g-----i~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~ 545 (1024)
+.++++|++.-...+.. | ...-++++.+. ....+.++|+=-.+.+.. .+... . ...
T Consensus 205 ~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ii~k~Hp~is~----------~~~~~-~--~~~ 268 (388)
T COG1887 205 PQDKKVILYAPTFRDNDVLIGTQFFNLDIDIEKLKEK---LGENEYVIIVKPHPLISD----------KIDKR-Y--ALD 268 (388)
T ss_pred cccCceEEecCCccCCccccchhhhhhhhhHHHHHHh---hccCCeEEEEecChhhhh----------hhhhh-h--hcc
Confidence 45789999988776664 2 22233333333 222456666644332111 11110 0 111
Q ss_pred CCEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC---------CCchhhhccCCcEEE
Q 001705 546 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN---------GGPVDILKALNNGLL 616 (1024)
Q Consensus 546 ~~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~---------Gg~~eii~~~~~Gll 616 (1024)
+.+...-. ..++.++|..+ |++|. -++-+..|+|..-+|||--.. |-..+. .....|-+
T Consensus 269 ~~~~~vs~--~~di~dll~~s----DiLIT-----DySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~~ 336 (388)
T COG1887 269 DFVLDVSD--NADINDLLLVS----DILIT-----DYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGEV 336 (388)
T ss_pred ceeEeccc--chhHHHHHhhh----CEEEe-----echHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCccc
Confidence 11222222 47999999999 99883 468899999999999998531 222221 12234666
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 001705 617 VDPHDQNAIADALLKLLADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 617 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~~~~fsw~~~a~~~l~~~ 666 (1024)
+. +..++.++|.....+++...+..+...+....+.=....+++.+.+
T Consensus 337 ~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 337 VE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGRSSERILKLI 384 (388)
T ss_pred cc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccHHHHHHHHH
Confidence 65 7899999999988865544433333333332332244455555444
No 430
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=35.49 E-value=40 Score=40.32 Aligned_cols=47 Identities=2% Similarity=0.005 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+.|+++ |+.++|+|+.+...+...++.+++. ..||.++|.
T Consensus 333 pG~~e~L~~Lk~~----g~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~ 379 (459)
T PRK06698 333 PNVKEIFTYIKEN----NCSIYIASNGLTEYLRAIVSYYDLD-QWVTETFSI 379 (459)
T ss_pred CCHHHHHHHHHHC----CCeEEEEeCCchHHHHHHHHHCCcH-hhcceeEec
Confidence 5667888999887 9999999999999999999998885 357777764
No 431
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=35.32 E-value=33 Score=36.25 Aligned_cols=21 Identities=10% Similarity=0.099 Sum_probs=13.8
Q ss_pred EEEEecCCCCCCCchhhHHHH
Q 001705 751 VIAADCYDSDGNTTETFQATI 771 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~ 771 (1024)
.|.||+||||.+......+..
T Consensus 6 ~viFD~DGTL~d~~~~~~~a~ 26 (221)
T PRK10563 6 AVFFDCDGTLVDSEVICSRAY 26 (221)
T ss_pred EEEECCCCCCCCChHHHHHHH
Confidence 455999999988743333333
No 432
>PRK11587 putative phosphatase; Provisional
Probab=34.72 E-value=54 Score=34.67 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|+.|+++ |+.++|+|+.+...+...++..++. .++.++|
T Consensus 86 pg~~e~L~~L~~~----g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~ 130 (218)
T PRK11587 86 PGAIALLNHLNKL----GIPWAIVTSGSVPVASARHKAAGLP--APEVFVT 130 (218)
T ss_pred cCHHHHHHHHHHc----CCcEEEEcCCCchHHHHHHHhcCCC--CccEEEE
Confidence 5677899999887 9999999999888777788887774 3666554
No 433
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=34.68 E-value=29 Score=35.49 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=19.0
Q ss_pred EEEEecCCCCCCCchhhHHHHHHHHHH
Q 001705 751 VIAADCYDSDGNTTETFQATIKNVMKA 777 (1024)
Q Consensus 751 lIa~DlDGTl~~~~~~i~~~~~~~l~~ 777 (1024)
.|.||+||||.++.....+...++++.
T Consensus 7 ~viFD~DGTLiDs~~~~~~a~~~~~~~ 33 (188)
T PRK10725 7 GLIFDMDGTILDTEPTHRKAWREVLGR 33 (188)
T ss_pred EEEEcCCCcCccCHHHHHHHHHHHHHH
Confidence 556999999998865556555555543
No 434
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=34.62 E-value=70 Score=33.15 Aligned_cols=40 Identities=10% Similarity=0.061 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+...++|+.++++ |+.++|+||-....+..+++.+++.
T Consensus 88 ~~~~~~~~l~~l~~~----g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 88 LYPEARDLIRWHKAE----GHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred ccHHHHHHHHHHHHC----CCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 457888999999887 9999999999999999999998874
No 435
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=34.39 E-value=52 Score=32.40 Aligned_cols=45 Identities=16% Similarity=0.256 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|+.|+++ |+.++|+|+++...+..+++.+ +. ..|+.++|
T Consensus 67 ~g~~e~l~~L~~~----g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~ 111 (154)
T TIGR01549 67 RGAADLLKRLKEA----GIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILG 111 (154)
T ss_pred cCHHHHHHHHHHC----cCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEe
Confidence 3467889999877 9999999999999999988885 42 23555555
No 436
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=34.34 E-value=60 Score=34.29 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCT 808 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~ 808 (1024)
+.+.+.++++.++++ |+.++|+||.....+..+++.++
T Consensus 71 l~pg~~e~l~~l~~~----g~~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 71 IREGFREFVAFINEH----GIPFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred ccccHHHHHHHHHHC----CCeEEEECCCcHHHHHHHHHhhC
Confidence 346777899999887 99999999999999999998864
No 437
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=33.90 E-value=2.7e+02 Score=31.17 Aligned_cols=100 Identities=12% Similarity=0.024 Sum_probs=56.7
Q ss_pred CCcEEEEEeCCCCCCCHH--HHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDPKKNVT--TLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~~Kgi~--~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
++.++++.|.-.+.|.+. ...+....+.+ ....++ +++++++. .+..+++ .+..+ ...+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~--~~~~~v-l~~g~~~e-------~~~~~~i---~~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA--RGLQIV-LPWGNDAE-------KQRAERI---AEALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH--CCCeEE-EeCCCHHH-------HHHHHHH---HhhCC---CCeecCC
Confidence 344666777655667664 56666666632 222333 33333321 1112223 22222 2355688
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.+-.++.++++.| +++|..- . |. +-=|.|.|+|+|+=.
T Consensus 243 ~sL~el~ali~~a----~l~I~~D---S-gp-~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 243 MSLAEVAALLAGA----DAVVGVD---T-GL-THLAAALDKPTVTLY 280 (319)
T ss_pred CCHHHHHHHHHcC----CEEEeCC---C-hH-HHHHHHcCCCEEEEE
Confidence 7888999999999 8988652 2 22 223678899999854
No 438
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=33.67 E-value=3.1e+02 Score=27.68 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=37.4
Q ss_pred CcceEEEEcCCChHHH-HHHHH--ccC-CCCEEEEeCCCch-hhhHHHHhcCCCCcchhhHHHHHHHHHHHHHhhhcCCE
Q 001705 303 TWPYVIHGHYADAGEV-AAHLS--GAL-NVPMVLTGHSLGR-NKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEM 377 (1024)
Q Consensus 303 ~~pDvIh~h~~~~~~~-a~~l~--~~~-~ipiV~t~H~l~~-~~~~~l~~~g~~~~~i~~~y~~~r~i~~e~~~l~~Ad~ 377 (1024)
.+||+|.+.++.+..+ ...++ +.+ ++|++..+-|+.. .. .++-..+|.
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~---------------------------~W~~~~~D~ 140 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP---------------------------FWIHPGVDR 140 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc---------------------------CeecCCCCE
Confidence 6899999877754444 33233 334 5787655444311 10 113568999
Q ss_pred EEeCCHHHHHHHH
Q 001705 378 VVTSTRQEIEMQW 390 (1024)
Q Consensus 378 Vi~~S~~~~~~~~ 390 (1024)
.++.|++..+++.
T Consensus 141 y~Vase~~~~~l~ 153 (169)
T PF06925_consen 141 YFVASEEVKEELI 153 (169)
T ss_pred EEECCHHHHHHHH
Confidence 9999998777653
No 439
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=33.12 E-value=46 Score=34.64 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
-+.....++++++|+++++++++ ||+.. | +..=+.+|..++.-
T Consensus 142 P~p~~~~~~~~~~~~~p~~~l~v-gD~~~-d-i~aA~~aG~~~i~~ 184 (199)
T PRK09456 142 PEARIYQHVLQAEGFSAADAVFF-DDNAD-N-IEAANALGITSILV 184 (199)
T ss_pred CCHHHHHHHHHHcCCChhHeEEe-CCCHH-H-HHHHHHcCCEEEEe
Confidence 35677888999999999999996 99998 9 88888889865544
No 440
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=32.92 E-value=41 Score=35.95 Aligned_cols=40 Identities=5% Similarity=0.042 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
..+.+.++|..|+++ |+.++++|+.+...+...++..|+.
T Consensus 87 ~~pGv~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl~ 126 (221)
T COG0637 87 PIPGVVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGLL 126 (221)
T ss_pred CCccHHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccCh
Confidence 447788999999988 8999999999999999999998874
No 441
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=32.85 E-value=2.2e+02 Score=31.24 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=50.2
Q ss_pred HHHHHcCCCC--CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCC--CCCCHHHHHHHHcCCcEEEcCCCCchhhhccCC
Q 001705 537 KLIDKYDLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALV--EPFGLTIIEAAAYGLPVVATKNGGPVDILKALN 612 (1024)
Q Consensus 537 ~~i~~~~l~~--~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~--Egfgl~llEAmA~G~PVVat~~Gg~~eii~~~~ 612 (1024)
..+.++|+.+ .|..-|..+.+.=.++++.. ..|++|.=-.- .|+--++--|..+|+|||.=.-+....
T Consensus 165 ~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~------ 236 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRGPFSEELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP------ 236 (256)
T ss_pred HHHHHcCCChhcEEEEeCCCCHHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC------
Confidence 3455666543 35556666655556777765 23555532222 244566777788899999876654211
Q ss_pred cEEEeCCCCHHHHHHHHHHHH
Q 001705 613 NGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll 633 (1024)
....++ +.+++.+.+.+++
T Consensus 237 ~~~~~~--~~~el~~~l~~~~ 255 (256)
T TIGR00715 237 GVAIFD--DISQLNQFVARLL 255 (256)
T ss_pred CCccCC--CHHHHHHHHHHhc
Confidence 112333 7777777776654
No 442
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=32.51 E-value=84 Score=32.00 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=48.1
Q ss_pred CCCchhhHHHHHHHHHhcCCeEEEEEecCCeE---------EEEecCCCCH--HHHHHHHHHHhCCCCCCEEEEeCCCCC
Q 001705 887 PGAETRKVDNIRQRLRMRGFRCNLVYTRAGSR---------LNVVPSFASR--IQALRYLSIRWGIDLSKMVVFVGEKGD 955 (1024)
Q Consensus 887 ~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~---------lEI~p~gasK--g~AL~~L~~~~gi~~~~vvafiGDs~N 955 (1024)
+++..+.+.+....++..+..+.++....... ++.+- +|-| +.|++.-+..+++++++++++ ||..=
T Consensus 44 ~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~-~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~ 121 (175)
T COG2179 44 NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFIY-RAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLF 121 (175)
T ss_pred CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceee-cccCccHHHHHHHHHHcCCChhHEEEE-cchhh
Confidence 34455555555566666655443332211111 22221 2223 688999999999999999995 99988
Q ss_pred CChHHhhcC--CCc-eEEec
Q 001705 956 TDYEDLLVG--LHK-TLILR 972 (1024)
Q Consensus 956 ~D~~~Ml~~--ag~-gVaMg 972 (1024)
|| .|.+ +|+ +|-+.
T Consensus 122 TD---Vlggnr~G~~tIlV~ 138 (175)
T COG2179 122 TD---VLGGNRAGMRTILVE 138 (175)
T ss_pred hh---hhcccccCcEEEEEE
Confidence 77 6654 443 44444
No 443
>PLN02940 riboflavin kinase
Probab=31.91 E-value=47 Score=38.73 Aligned_cols=48 Identities=19% Similarity=0.176 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHH-hcCCCCCCCCEEEecC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIR-RCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~-~~~i~~~~~d~lI~~n 821 (1024)
+.+.++|+.|+++ |+.++|+|+.+...+...+. ..++. ..||.++|+.
T Consensus 96 pGv~elL~~Lk~~----g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 96 PGANRLIKHLKSH----GVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred cCHHHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 5667899999887 99999999999999888887 56764 3578888744
No 444
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.37 E-value=3e+02 Score=30.97 Aligned_cols=46 Identities=17% Similarity=0.095 Sum_probs=34.6
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcCC
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKN 601 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~~ 601 (1024)
.+.+.|..+-.|+.++++.| |++|..-. |. +-=|.|+|+|+|+=.-
T Consensus 235 ~~~l~g~~sL~elaali~~a----~l~I~nDS----Gp-~HlA~A~g~p~valfG 280 (322)
T PRK10964 235 YVEVLPKLSLEQVARVLAGA----KAVVSVDT----GL-SHLTAALDRPNITLYG 280 (322)
T ss_pred cceecCCCCHHHHHHHHHhC----CEEEecCC----cH-HHHHHHhCCCEEEEEC
Confidence 46677888888999999999 89986522 22 3337899999999643
No 445
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=31.21 E-value=63 Score=32.55 Aligned_cols=38 Identities=5% Similarity=0.020 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+.+++++++++ |+.++|+||.....+..+++.+++.
T Consensus 76 ~g~~~~l~~l~~~----g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 76 PGARELISWLKER----GIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5567888888887 9999999999999999999998874
No 446
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=31.07 E-value=61 Score=38.80 Aligned_cols=41 Identities=29% Similarity=0.329 Sum_probs=33.6
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHc---------CCCceEEEEEecCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALAN---------TEGVYRVDLLTRQIA 225 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~---------~g~v~~V~vlt~~~~ 225 (1024)
++++++... +| .||.++-+++.+.+|.. +| ++|.++|....
T Consensus 35 ~~~~~~~~~---------~~----~gg~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~ 84 (495)
T KOG0853|consen 35 EHVTFIHPD---------LG----IGGAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHED 84 (495)
T ss_pred hhheeeccc---------cc----cCchHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhh
Confidence 667777644 33 78999999999999999 99 99999998753
No 447
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=30.91 E-value=46 Score=36.50 Aligned_cols=42 Identities=10% Similarity=-0.092 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCC-CCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 928 RIQALRYLSIRWGID-LSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~gi~-~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
+...+...++++|+. ++++++| ||+.+ | +.+=+.+|. +|++.
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~I-GDs~~-D-i~aA~~aG~~~i~v~ 203 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKV-DDTVP-G-IEEGLNAGMWTVGVI 203 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEE-cCcHH-H-HHHHHHCCCEEEEEc
Confidence 356788999999996 6899996 99999 9 888888886 33443
No 448
>PRK09449 dUMP phosphatase; Provisional
Probab=30.88 E-value=57 Score=34.47 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEe
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVC 819 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~ 819 (1024)
+.+.++|+.|+ + |++++|+|.-+...+...++.+++. ..||.+++
T Consensus 98 ~g~~~~L~~L~-~----~~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~ 142 (224)
T PRK09449 98 PGAVELLNALR-G----KVKMGIITNGFTELQQVRLERTGLR-DYFDLLVI 142 (224)
T ss_pred ccHHHHHHHHH-h----CCeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEE
Confidence 56678888887 5 7899999999888888899998874 34666655
No 449
>PLN02954 phosphoserine phosphatase
Probab=30.79 E-value=62 Score=34.19 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+.++|+.++++ |+.++|+||.....+..+++.+|++
T Consensus 87 pg~~e~l~~l~~~----g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 87 PGIPELVKKLRAR----GTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred ccHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHhCCC
Confidence 6677899999887 9999999999999999999999884
No 450
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=30.72 E-value=43 Score=34.15 Aligned_cols=42 Identities=19% Similarity=0.045 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCC-CCChHHhhcCCCceEEe
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKG-DTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~-N~D~~~Ml~~ag~gVaM 971 (1024)
-+...+..+++++|+++++++++ ||+. . | +..=+.+|...+.
T Consensus 92 P~p~~~~~~l~~~~~~~~~~l~I-GDs~~~-D-i~aA~~aGi~~i~ 134 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSEQVAVV-GDRLFT-D-VMGGNRNGSYTIL 134 (170)
T ss_pred CChHHHHHHHHHcCCCHHHEEEE-CCcchH-H-HHHHHHcCCeEEE
Confidence 35778999999999999999996 9997 6 8 7777778865443
No 451
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=29.57 E-value=47 Score=34.00 Aligned_cols=26 Identities=8% Similarity=-0.109 Sum_probs=18.4
Q ss_pred EEEecCCCCCCCchhhHHHHHHHHHH
Q 001705 752 IAADCYDSDGNTTETFQATIKNVMKA 777 (1024)
Q Consensus 752 Ia~DlDGTl~~~~~~i~~~~~~~l~~ 777 (1024)
|.||+||||.+....+.....+++.+
T Consensus 3 viFDlDGTL~ds~~~~~~~~~~~~~~ 28 (184)
T TIGR01993 3 WFFDLDNTLYPHSAGIFLQIDRNITE 28 (184)
T ss_pred EEEeCCCCCCCCcccHHHHHHHHHHH
Confidence 45999999998765666666555543
No 452
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=29.57 E-value=65 Score=33.87 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=29.8
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecCCCC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIAS 226 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~ 226 (1024)
||||+.+-.|. ....+..|+++|.+.| |+|.|+++....
T Consensus 1 M~ILlTNDDGi----------------~a~Gi~aL~~~L~~~g--~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGI----------------DAPGIRALAKALSALG--HDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-T----------------TSHHHHHHHHHHTTTS--SEEEEEEESSST
T ss_pred CeEEEEcCCCC----------------CCHHHHHHHHHHHhcC--CeEEEEeCCCCC
Confidence 89999997754 2446778999998888 999999997543
No 453
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=29.53 E-value=1.4e+02 Score=29.81 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=66.5
Q ss_pred cchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCC-cEEEecCCCCCCCHHHHHHHHc-CCcEEEcC--CC
Q 001705 527 SSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPALVEPFGLTIIEAAAY-GLPVVATK--NG 602 (1024)
Q Consensus 527 ~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~-dv~v~ps~~Egfgl~llEAmA~-G~PVVat~--~G 602 (1024)
+-+++...+.+.+.++++ .+.|...=..-++.+.+..|.... ++.++|.-+--.+..+..|++. ++|+|=-- +-
T Consensus 27 tl~~i~~~~~~~a~~~g~--~~~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~DAl~~~~~P~VEVHiSNi 104 (146)
T PRK13015 27 TLADVEALCRAAAEALGL--EVEFRQSNHEGELIDWIHEARGDVAGIVINPGAYTHTSVAIRDALAALELPVIEVHISNV 104 (146)
T ss_pred CHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhhcCCEEEEcchHHhhhHHHHHHHHHcCCCCEEEEEcCCc
Confidence 445666777777777776 477766654567877777774333 4778898777788999999877 89997432 22
Q ss_pred Cchh------hhccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 603 GPVD------ILKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 603 g~~e------ii~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
-.+| ++..-..|.+.= .-.++..-||..++
T Consensus 105 ~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~al~ 140 (146)
T PRK13015 105 HAREAFRHHSYVSAIADGVICG-LGTEGYRLALRRLA 140 (146)
T ss_pred cccccccccccccCceeEEEee-CCHHHHHHHHHHHH
Confidence 2233 233333455553 24566666666665
No 454
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=29.40 E-value=7.9e+02 Score=26.99 Aligned_cols=126 Identities=14% Similarity=0.069 Sum_probs=79.3
Q ss_pred CCCCHHHHHHHHhhccccCCCCcEEE--EEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEe---CCCCCCCCHHHH
Q 001705 488 PKKNVTTLLKAFGECQPLRELANMTL--ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAY---PKHHKQSDVPDI 562 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~~~l~L--IvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~---~g~~~~~el~~l 562 (1024)
+.+.++.+.++++..++.. -.+.+ ....+ ...+++.++.+.+.+.+.. .+.+ .|...++++..+
T Consensus 104 ~~~~~~~~~~~i~~ak~~G--~~v~~~~~~a~~--------~~~~~~~~~~~~~~~~g~~-~i~l~DT~G~~~P~~v~~l 172 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKG--YEVFFNLMAISG--------YSDEELLELLELVNEIKPD-VFYIVDSFGSMYPEDIKRI 172 (266)
T ss_pred ccccHHHHHHHHHHHHHCC--CeEEEEEEeecC--------CCHHHHHHHHHHHHhCCCC-EEEEecCCCCCCHHHHHHH
Confidence 4567888888888886422 22322 11222 2345556666666667644 4555 688888899988
Q ss_pred HHHhhcCCc--EEEecCCCCCCCHH---HHHHHHcCCcEEEcCCCCchhhhccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 563 YRLAAKTKG--VFINPALVEPFGLT---IIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 563 y~~A~~~~d--v~v~ps~~Egfgl~---llEAmA~G~PVVat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
++......+ +-|---....+|+. .++|+.+|+=.|-+..+|+.+- .|+ -..++++..|...+
T Consensus 173 v~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~--aGN-------~~~E~~v~~l~~~~ 239 (266)
T cd07944 173 ISLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG--AGN-------LPTELLLDYLNNKF 239 (266)
T ss_pred HHHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC--cCc-------HHHHHHHHHHHHhh
Confidence 888754333 43333346777775 5788888999999998888762 111 14667777776653
No 455
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=29.36 E-value=52 Score=31.76 Aligned_cols=31 Identities=6% Similarity=0.313 Sum_probs=27.8
Q ss_pred CHHHHHHHHHHHhC--CCCCCEEEEeCCCCCCChHH
Q 001705 927 SRIQALRYLSIRWG--IDLSKMVVFVGEKGDTDYED 960 (1024)
Q Consensus 927 sKg~AL~~L~~~~g--i~~~~vvafiGDs~N~D~~~ 960 (1024)
.|...+..+++++| ++++++++| ||+.. | ++
T Consensus 90 pkp~~~~~a~~~lg~~~~p~~~l~i-gDs~~-n-~~ 122 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPKSILFV-DDRPD-N-NE 122 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcceEEEE-CCCHh-H-HH
Confidence 58999999999999 999999997 99987 7 44
No 456
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=28.88 E-value=87 Score=33.17 Aligned_cols=46 Identities=11% Similarity=0.045 Sum_probs=34.8
Q ss_pred HHHHHHHH-HHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMK-AAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~-~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+...+.|+ .++++ |+.++|+|+-+...+.++.+..++- +.+.+||.
T Consensus 97 pga~e~L~~~l~~~----G~~v~IvSas~~~~~~~ia~~~~~~--~~~~~i~t 143 (210)
T TIGR01545 97 PLVAERLRQYLESS----DADIWLITGSPQPLVEAVYFDSNFI--HRLNLIAS 143 (210)
T ss_pred ccHHHHHHHHHHhC----CCEEEEEcCCcHHHHHHHHHhcccc--ccCcEEEE
Confidence 56778885 66666 9999999999999999999885551 23456764
No 457
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=28.65 E-value=3.1e+02 Score=29.25 Aligned_cols=103 Identities=14% Similarity=0.120 Sum_probs=54.2
Q ss_pred CCcEEEEEeCCCCCCCHHH--HHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 476 HKPTILALSRPDPKKNVTT--LLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 476 ~~~~Il~vgRld~~Kgi~~--ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+..+++..|.-.+.|.+.. ..+.+..+.+ ....+ +++|...+. ..+.+..+..... ...+.+.+.
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~--~~~~v-vl~g~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~ 171 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKE--RGYRV-VLLGGPEEQ---------EKEIADQIAAGLQ-NPVINLAGK 171 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCC--CT-EE-EE--SSHHH---------HHHHHHHHHTTHT-TTTEEETTT
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHh--hCceE-EEEccchHH---------HHHHHHHHHHhcc-cceEeecCC
Confidence 3456666776667777655 6666777642 22233 355553320 0111222222221 126788888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.+-.|+..+.+.| |++|.+- + | .+-=|.|.|+|+|+=.
T Consensus 172 ~~l~e~~ali~~a----~~~I~~D---t-g-~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 172 TSLRELAALISRA----DLVIGND---T-G-PMHLAAALGTPTVALF 209 (247)
T ss_dssp S-HHHHHHHHHTS----SEEEEES---S-H-HHHHHHHTT--EEEEE
T ss_pred CCHHHHHHHHhcC----CEEEecC---C-h-HHHHHHHHhCCEEEEe
Confidence 8888999999999 8999763 2 2 2333788999999964
No 458
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=28.31 E-value=82 Score=34.96 Aligned_cols=40 Identities=10% Similarity=0.127 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+.+.+.++.|++. |+.++|+||=....+...++.+++.
T Consensus 122 l~pG~~efl~~L~~~----GIpv~IvS~G~~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 122 LKDGYENFFDKLQQH----SIPVFIFSAGIGNVLEEVLRQAGVY 161 (277)
T ss_pred cCcCHHHHHHHHHHC----CCcEEEEeCCcHHHHHHHHHHcCCC
Confidence 446778999999887 9999999999999999999998873
No 459
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=28.28 E-value=60 Score=34.50 Aligned_cols=40 Identities=8% Similarity=0.108 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 767 FQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 767 i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
+.+...++++.+++. |.+++|+||=...-+.++.+.+|++
T Consensus 78 l~~ga~elv~~lk~~----G~~v~iiSgg~~~lv~~ia~~lg~d 117 (212)
T COG0560 78 LTPGAEELVAALKAA----GAKVVIISGGFTFLVEPIAERLGID 117 (212)
T ss_pred CCccHHHHHHHHHHC----CCEEEEEcCChHHHHHHHHHHhCCc
Confidence 447778999999987 9999999999999999999999885
No 460
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=28.26 E-value=72 Score=32.40 Aligned_cols=45 Identities=22% Similarity=0.277 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|++|+++ |+.++|+|+... ....++.+++. ..||.++++
T Consensus 90 pg~~~~L~~L~~~----g~~~~i~s~~~~--~~~~l~~~~l~-~~f~~~~~~ 134 (185)
T TIGR01990 90 PGIKNLLDDLKKN----NIKIALASASKN--APTVLEKLGLI-DYFDAIVDP 134 (185)
T ss_pred ccHHHHHHHHHHC----CCeEEEEeCCcc--HHHHHHhcCcH-hhCcEEEeh
Confidence 6777999999987 999999998653 35678888875 457777653
No 461
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=26.79 E-value=62 Score=36.09 Aligned_cols=43 Identities=2% Similarity=-0.124 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHhCC-CCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 926 ASRIQALRYLSIRWGI-DLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 926 asKg~AL~~L~~~~gi-~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
-.....+...+++++. +++++++| ||+.+ | +.+-+.+|+.++.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~v-gD~~~-d-~~~a~~~Gi~~i~ 294 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAV-DDRDQ-V-VDMWRRIGLECWQ 294 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEE-cCcHH-H-HHHHHHhCCeEEE
Confidence 4445577777777788 56889996 99999 9 9999999987654
No 462
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=26.38 E-value=1.9e+02 Score=29.68 Aligned_cols=29 Identities=14% Similarity=0.232 Sum_probs=23.9
Q ss_pred CCCCCCEEEEeCCCCCCChHHhhcCCCceEEe
Q 001705 940 GIDLSKMVVFVGEKGDTDYEDLLVGLHKTLIL 971 (1024)
Q Consensus 940 gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaM 971 (1024)
|++++++++| ||+.. | +..=+.+|..++.
T Consensus 127 gl~p~e~l~V-gDs~~-d-i~aA~~aGi~~i~ 155 (174)
T TIGR01685 127 VLKPAQILFF-DDRTD-N-VREVWGYGVTSCY 155 (174)
T ss_pred CCCHHHeEEE-cChhH-h-HHHHHHhCCEEEE
Confidence 6999999996 99999 9 8887777765543
No 463
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=26.34 E-value=43 Score=34.81 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHh
Q 001705 927 SRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDL 961 (1024)
Q Consensus 927 sKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~M 961 (1024)
-+-..+..+++++|++++++++| ||+.+ | +..
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~v-GD~~~-D-i~a 193 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMV-GDTVD-D-IIT 193 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEE-eCCHH-H-HHH
Confidence 35677888999999999999996 99999 8 543
No 464
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=26.07 E-value=1.4e+02 Score=29.35 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=25.7
Q ss_pred eEEEEEecccccccCCCCCCCCCCCChHHHHHHHHHHHHHcCCCceEEEEEecC
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQ 223 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~ 223 (1024)
|||++|+.. + ...|=....+..+++.|.+.| ++|.++-..
T Consensus 1 Mkilii~gS----------~--r~~~~t~~l~~~~~~~l~~~g--~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGS----------P--RKNSNTRKLAEAVAEQLEEAG--AEVEVIDLA 40 (152)
T ss_dssp -EEEEEESS----------S--STTSHHHHHHHHHHHHHHHTT--EEEEEEECT
T ss_pred CEEEEEECc----------C--CCCCHHHHHHHHHHHHHHHcC--CEEEEEecc
Confidence 899999844 1 123445555556666676778 999998543
No 465
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=25.61 E-value=61 Score=34.08 Aligned_cols=42 Identities=10% Similarity=0.001 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHh-CCCCCCEEEEeCCCC-CCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRW-GIDLSKMVVFVGEKG-DTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~-gi~~~~vvafiGDs~-N~D~~~Ml~~ag~gVaMg 972 (1024)
+......+++++ |+++++++++ ||+. + | +..=+.+|...+.-
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~v~i-gD~~~~-d-i~~A~~~G~~~i~~ 197 (224)
T TIGR02254 154 DKEIFNYALERMPKFSKEEVLMI-GDSLTA-D-IKGGQNAGLDTCWM 197 (224)
T ss_pred CHHHHHHHHHHhcCCCchheEEE-CCCcHH-H-HHHHHHCCCcEEEE
Confidence 456788999999 9999999886 9997 7 8 88888888755443
No 466
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=25.60 E-value=3.8e+02 Score=28.95 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=68.5
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCC
Q 001705 478 PTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQS 557 (1024)
Q Consensus 478 ~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~ 557 (1024)
.++++-+++...-=++.....+..+. .+.+++.+ +..-... ...+.|..+..+.+.+++.. +..+.. .+
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~--~~~~~v~f-IPtAs~~----~~~~~y~~~~~~af~~lG~~--v~~l~~--~~ 71 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELL--AGRRKAVF-IPYAGVT----QSWDDYTAKVAEALAPLGIE--VTGIHR--VA 71 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHH--cCCCeEEE-ECCCCCC----CCHHHHHHHHHHHHHHCCCE--EEEecc--ch
Confidence 35667777766444566666666663 34456544 4222111 12245677788888888875 333322 24
Q ss_pred CHHHHHHHhhcCCcEEEecC--------CC--CCCCHHHHHHHHcCCcEEEcCCCCc
Q 001705 558 DVPDIYRLAAKTKGVFINPA--------LV--EPFGLTIIEAAAYGLPVVATKNGGP 604 (1024)
Q Consensus 558 el~~ly~~A~~~~dv~v~ps--------~~--Egfgl~llEAmA~G~PVVat~~Gg~ 604 (1024)
+..+.+..| |++.++- .+ -++--.+.|+...|+|++.+.+|+.
T Consensus 72 d~~~~l~~a----d~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~G~~~~G~SAGAi 124 (233)
T PRK05282 72 DPVAAIENA----EAIFVGGGNTFQLLKQLYERGLLAPIREAVKNGTPYIGWSAGAN 124 (233)
T ss_pred hhHHHHhcC----CEEEECCccHHHHHHHHHHCCcHHHHHHHHHCCCEEEEECHHHH
Confidence 566778888 8766651 11 2333457799999999999999884
No 467
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=25.57 E-value=1.7e+02 Score=30.27 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=45.3
Q ss_pred HHHHHHHhcCCeEEEEEecCCeEEEEecCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCc-eEEec
Q 001705 896 NIRQRLRMRGFRCNLVYTRAGSRLNVVPSFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHK-TLILR 972 (1024)
Q Consensus 896 el~~~L~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~-gVaMg 972 (1024)
-+.+.|...+..+.-++..+..--+-.+-.==|.--+..+++++++++++.+++ ||... | +..=..+|. ++...
T Consensus 75 ~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~V-GD~~~-D-lq~a~n~gi~~~~~~ 149 (181)
T COG0241 75 KMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVV-GDRLT-D-LQAAENAGIKGVLVL 149 (181)
T ss_pred HHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEe-cCcHH-H-HHHHHHCCCCceEEE
Confidence 345666777665555544432112212222235666888889999999999995 99998 9 655544443 44444
No 468
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=25.55 E-value=89 Score=32.43 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEecC
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCNS 821 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~n 821 (1024)
+.+.++|+.|++. |+.++|+|+-+. .+...++.+++. ..||.++++.
T Consensus 108 ~g~~~~l~~L~~~----g~~~~i~Sn~~~-~~~~~l~~~~l~-~~fd~i~~s~ 154 (203)
T TIGR02252 108 PDAIKLLKDLRER----GLILGVISNFDS-RLRGLLEALGLL-EYFDFVVTSY 154 (203)
T ss_pred cCHHHHHHHHHHC----CCEEEEEeCCch-hHHHHHHHCCcH-HhcceEEeec
Confidence 5667889999887 999999998765 457788888874 3477776643
No 469
>PLN02811 hydrolase
Probab=25.17 E-value=78 Score=33.52 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhC---CCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 928 RIQALRYLSIRWG---IDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 928 Kg~AL~~L~~~~g---i~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
+...+.+.+++++ ++++++++| ||+.. | +.+=+.+|..++.-
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~I-gDs~~-d-i~aA~~aG~~~i~v 183 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVF-EDAPS-G-VEAAKNAGMSVVMV 183 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEE-eccHh-h-HHHHHHCCCeEEEE
Confidence 4457888888886 999999996 99999 9 88888888755433
No 470
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=24.86 E-value=1.5e+02 Score=30.03 Aligned_cols=38 Identities=16% Similarity=0.320 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhC--CCCCCEEEEeCCCC--------CCChHHhhcCCCceE
Q 001705 929 IQALRYLSIRWG--IDLSKMVVFVGEKG--------DTDYEDLLVGLHKTL 969 (1024)
Q Consensus 929 g~AL~~L~~~~g--i~~~~vvafiGDs~--------N~D~~~Ml~~ag~gV 969 (1024)
...+.++++++| +++++++++ ||+. + | +..=+.+|..+
T Consensus 111 p~~~~~~~~~~~~~~~~~~~v~V-GD~~~~~~~~~~~-D-i~aA~~aGi~~ 158 (166)
T TIGR01664 111 TGMWEYLQSQYNSPIKMTRSFYV-GDAAGRKLDFSDA-D-IKFAKNLGLEF 158 (166)
T ss_pred cHHHHHHHHHcCCCCCchhcEEE-ECCCCCCCCCchh-H-HHHHHHCCCCc
Confidence 568899999999 999999995 9985 5 7 55555555543
No 471
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.73 E-value=2.3e+02 Score=32.24 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=59.2
Q ss_pred CcEEEEEe-CCCCCCCHH--HHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCC
Q 001705 477 KPTILALS-RPDPKKNVT--TLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKH 553 (1024)
Q Consensus 477 ~~~Il~vg-Rld~~Kgi~--~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~ 553 (1024)
+.+++..| .-...|+++ ...+..+.+.+ +..++ ++.|+.++ .+..+++.+.+.- .+.+.|.
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~--~~~~V-vl~g~~~e-----------~e~~~~i~~~~~~--~~~l~~k 239 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIA--KGYQV-VLFGGPDE-----------EERAEEIAKGLPN--AVILAGK 239 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHH--CCCEE-EEecChHH-----------HHHHHHHHHhcCC--ccccCCC
Confidence 44556666 444566554 55555555542 22233 34455432 2333444444431 2227888
Q ss_pred CCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 554 HKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 554 ~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.+-.|+.++...| |++|.+.. |++-+ |.|.|+|+|+-.
T Consensus 240 ~sL~e~~~li~~a----~l~I~~DS----g~~Hl-AaA~~~P~I~iy 277 (334)
T COG0859 240 TSLEELAALIAGA----DLVIGNDS----GPMHL-AAALGTPTIALY 277 (334)
T ss_pred CCHHHHHHHHhcC----CEEEccCC----hHHHH-HHHcCCCEEEEE
Confidence 8889999999999 89886632 44444 788999999965
No 472
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=24.15 E-value=2.5e+02 Score=31.90 Aligned_cols=45 Identities=22% Similarity=0.247 Sum_probs=34.0
Q ss_pred CEEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 547 QVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 547 ~V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
.+.+.|..+-.|+.++++.| +++|-. |+ | .+-=|.|.|+|+|+=.
T Consensus 242 ~~~l~g~~sL~el~ali~~a----~l~Vs~---DS-G-p~HlAaA~g~p~v~Lf 286 (344)
T TIGR02201 242 VTSLAGKLTLPQLAALIDHA----RLFIGV---DS-V-PMHMAAALGTPLVALF 286 (344)
T ss_pred ccccCCCCCHHHHHHHHHhC----CEEEec---CC-H-HHHHHHHcCCCEEEEE
Confidence 35578888888999999999 898865 22 2 2333789999999854
No 473
>PF14980 TIP39: TIP39 peptide
Probab=24.15 E-value=49 Score=25.91 Aligned_cols=15 Identities=27% Similarity=0.875 Sum_probs=12.1
Q ss_pred CchhhhHHHHHHhcC
Q 001705 4 NEWINGYLEAILDAG 18 (1024)
Q Consensus 4 ~~~~~~~~~~~~~~~ 18 (1024)
-.|+|||..-+|-++
T Consensus 36 ~~WLnSYMqkLLv~~ 50 (51)
T PF14980_consen 36 QKWLNSYMQKLLVVN 50 (51)
T ss_pred HHHHHHHHHHHHccc
Confidence 359999999888654
No 474
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=24.00 E-value=59 Score=33.72 Aligned_cols=34 Identities=9% Similarity=0.127 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCC
Q 001705 930 QALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLH 966 (1024)
Q Consensus 930 ~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag 966 (1024)
..+..+++.+++++++++++ ||+.| | ..|++.||
T Consensus 182 k~~~~~i~~l~~~~~~v~~v-GDg~n-D-~~al~~Ag 215 (215)
T PF00702_consen 182 KIFLRIIKELQVKPGEVAMV-GDGVN-D-APALKAAG 215 (215)
T ss_dssp HHHHHHHHHHTCTGGGEEEE-ESSGG-H-HHHHHHSS
T ss_pred hhHHHHHHHHhcCCCEEEEE-ccCHH-H-HHHHHhCc
Confidence 36688889999999988885 99999 9 99999876
No 475
>PHA02597 30.2 hypothetical protein; Provisional
Probab=23.72 E-value=39 Score=35.01 Aligned_cols=14 Identities=14% Similarity=-0.052 Sum_probs=0.0
Q ss_pred ceeEEEEEecCCCCCC
Q 001705 747 QMLIVIAADCYDSDGN 762 (1024)
Q Consensus 747 ~rlllIa~DlDGTl~~ 762 (1024)
.++++ ||+||||.+
T Consensus 2 ~k~vi--FDlDGTLiD 15 (197)
T PHA02597 2 KPTIL--TDVDGVLLS 15 (197)
T ss_pred CcEEE--EecCCceEc
No 476
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=23.33 E-value=5.8e+02 Score=28.78 Aligned_cols=117 Identities=16% Similarity=0.183 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHHHHcCCCceEEEEEecCCCCCCCCc-ccCCCccccCCCCCCCCCCCeEEEEecCCCCCCccccccCCc
Q 001705 195 GGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS-SYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP 273 (1024)
Q Consensus 195 GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~-~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lwp 273 (1024)
-|-+..+-.|.+.|.++| |+|-|+.-.+++|.-.. -.|..+.|-.- ...+|+.+..+|....-.++++.
T Consensus 62 aGKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGsiLGDRiRM~~~----~~~~~vFiRs~~srG~lGGlS~a---- 131 (323)
T COG1703 62 AGKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGSILGDRIRMQRL----AVDPGVFIRSSPSRGTLGGLSRA---- 131 (323)
T ss_pred CchHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCccccccHhhHHhh----ccCCCeEEeecCCCccchhhhHH----
Confidence 477888899999999999 99999999887764321 12444443211 34578888888864332222221
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCChHHHHHHHHccCCCCEEEEeCCCchh
Q 001705 274 YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVPMVLTGHSLGRN 340 (1024)
Q Consensus 274 ~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~ 340 (1024)
......++.. .-+|+|.+..--.|-.=.-+...-.+-++++....|..
T Consensus 132 ------------t~~~i~~ldA-------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~ 179 (323)
T COG1703 132 ------------TREAIKLLDA-------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDD 179 (323)
T ss_pred ------------HHHHHHHHHh-------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcH
Confidence 1111112222 35899998876555554555655678888899887664
No 477
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=23.28 E-value=6.4e+02 Score=25.87 Aligned_cols=27 Identities=26% Similarity=0.522 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHHHHHcCCCceEEE-EEecC
Q 001705 195 GGQVKYVVELARALANTEGVYRVD-LLTRQ 223 (1024)
Q Consensus 195 GG~~~~v~~La~aLa~~g~v~~V~-vlt~~ 223 (1024)
-|-...+..++..|...| +.|- ++|..
T Consensus 16 vGKtTl~~ki~e~L~~~g--~kvgGf~t~E 43 (179)
T COG1618 16 VGKTTLVLKIAEKLREKG--YKVGGFITPE 43 (179)
T ss_pred ccHHHHHHHHHHHHHhcC--ceeeeEEeee
Confidence 377889999999999999 8885 44544
No 478
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=22.83 E-value=1.6e+02 Score=31.13 Aligned_cols=53 Identities=13% Similarity=0.203 Sum_probs=22.7
Q ss_pred cceeEEEEEecCCCCCCCchhhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHH
Q 001705 746 RQMLIVIAADCYDSDGNTTETFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETME 802 (1024)
Q Consensus 746 ~~rlllIa~DlDGTl~~~~~~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~ 802 (1024)
.+++.++ +| |+|=..+...+.+.+.+.|+..--. ...+.|++|+|-......+
T Consensus 54 ~~~V~Iv-v~-D~TRp~p~~~il~~ll~~L~~~Gv~--~~~i~ii~A~G~Hr~~t~e 106 (204)
T PF09861_consen 54 GKRVAIV-VD-DITRPTPSDLILPALLEELEEAGVK--DEDITIIIALGTHRPMTEE 106 (204)
T ss_dssp -SEEEEE-EE--TTS---HHHHHHHHHHHHHT-T-T--T-EEEEEEE-TTS----HH
T ss_pred CCeEEEE-eC-CCCCCCCHHHHHHHHHHHHHhcCCC--ccCEEEEEeCCCCCCCCHH
Confidence 3455544 54 6773345445555555555441111 0257999999997665444
No 479
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=22.76 E-value=2.1e+02 Score=28.37 Aligned_cols=121 Identities=19% Similarity=0.266 Sum_probs=71.3
Q ss_pred CcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCC-cEEEecCCCCCCCHHHH
Q 001705 509 ANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPALVEPFGLTII 587 (1024)
Q Consensus 509 ~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~-dv~v~ps~~Egfgl~ll 587 (1024)
||+- .+|.++..-.-..+-+++...+.+.+.++++ .+.|...=..-++.+....|.... +++++|.-+--.+..+.
T Consensus 8 PNLN-lLG~REp~iYG~~tl~di~~~~~~~a~~~g~--~v~~~QSN~EGelId~i~~a~~~~dgiIINpga~THtSiAl~ 84 (141)
T TIGR01088 8 PNLN-MLGLREPGVYGSQTLEEIVEIIETFAAQLNV--ELEFFQSNSEGQLIDKIHEAEGQYDGIIINPGALTHTSVALR 84 (141)
T ss_pred CCcc-ccCCCCCCcCCCCCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHhccccCCEEEEcChHHhhhHHHHH
Confidence 4542 3355432222223446667777777777776 377766654567888888875433 47788987777889999
Q ss_pred HHHHc-CCcEEEcC--CCCchhh------hccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 588 EAAAY-GLPVVATK--NGGPVDI------LKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 588 EAmA~-G~PVVat~--~Gg~~ei------i~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
.|++. ++|+|=-- +--.+|- +..-..|.+.- .-.++..-||..++
T Consensus 85 DAl~~~~~P~vEVHiSNi~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~a~~ 138 (141)
T TIGR01088 85 DALAAVSLPVVEVHLSNVHAREEFRHHSYTAPVAGGVIVG-LGAQGYLLALRYLV 138 (141)
T ss_pred HHHHcCCCCEEEEEcCCccccccccccccccccceEEEee-cCHHHHHHHHHHHH
Confidence 99876 89987432 2222332 22223355542 23555556665554
No 480
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=22.65 E-value=1.1e+03 Score=26.15 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=65.2
Q ss_pred EEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEe---cCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001705 480 ILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILG---NRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 480 Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG---~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~ 556 (1024)
++.++.+---...+.+++....++++. ..+ +..| .+.....+..-..+-+..+.+...++|+. .+.-.++.
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~-~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~---~~te~~d~ 101 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHM-LRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLP---VVTEVMDT 101 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCE-EEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCC---EEEeeCCh
Confidence 555566666667888888888886532 222 2333 11111111111244566677777888864 23344445
Q ss_pred CCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHc-CCcEEEcC
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAY-GLPVVATK 600 (1024)
Q Consensus 557 ~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~-G~PVVat~ 600 (1024)
.++..+...+ |++-.+|. +-.+..++++++. |+||+.++
T Consensus 102 ~~~~~l~~~v----d~~kIga~-~~~n~~LL~~~a~~gkPV~lk~ 141 (266)
T PRK13398 102 RDVEEVADYA----DMLQIGSR-NMQNFELLKEVGKTKKPILLKR 141 (266)
T ss_pred hhHHHHHHhC----CEEEECcc-cccCHHHHHHHhcCCCcEEEeC
Confidence 6666666666 88888875 4445666666654 99999876
No 481
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=22.45 E-value=1.2e+02 Score=31.79 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCCCCCCCEEEec
Q 001705 769 ATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVNIEDFDAIVCN 820 (1024)
Q Consensus 769 ~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~~~~~d~lI~~ 820 (1024)
+.+.++|+++++ . +.++|+|+.+...+...++.+++. ..||.++++
T Consensus 100 ~g~~~~L~~l~~----~-~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~ 145 (224)
T TIGR02254 100 PGAFELMENLQQ----K-FRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVS 145 (224)
T ss_pred ccHHHHHHHHHh----c-CcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEc
Confidence 456688888875 2 789999999999999999998885 357777764
No 482
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=22.32 E-value=2.5e+02 Score=30.06 Aligned_cols=82 Identities=11% Similarity=0.161 Sum_probs=58.8
Q ss_pred EEEEEeCCCCCCCHHHHHHHHhhccccCCCCcEEEEEecCCCcccccccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCC
Q 001705 479 TILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSD 558 (1024)
Q Consensus 479 ~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIvG~~~~~~~l~~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~e 558 (1024)
-++++|-+...++-+.=.+.|.+-.++.+.-++-+|+-. |. +...+....+...+...++.+.....-|++.+.
T Consensus 96 ~VvAiGEiGLe~~t~~E~evf~~QL~LA~e~dvPviVHT-Pr-----~nK~e~t~~ildi~~~~~l~~~lvvIDH~N~et 169 (254)
T COG1099 96 DVVAIGEIGLEEATDEEKEVFREQLELARELDVPVIVHT-PR-----RNKKEATSKILDILIESGLKPSLVVIDHVNEET 169 (254)
T ss_pred CeeEeeecccccCCHHHHHHHHHHHHHHHHcCCcEEEeC-CC-----CcchhHHHHHHHHHHHcCCChhheehhcccHHH
Confidence 478889988888887777777654434443444445532 11 234567788999999999999999999999888
Q ss_pred HHHHHHHh
Q 001705 559 VPDIYRLA 566 (1024)
Q Consensus 559 l~~ly~~A 566 (1024)
+..++..-
T Consensus 170 v~~vld~e 177 (254)
T COG1099 170 VDEVLDEE 177 (254)
T ss_pred HHHHHhcc
Confidence 88777654
No 483
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=21.58 E-value=1.9e+02 Score=33.37 Aligned_cols=46 Identities=17% Similarity=0.132 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCChHHhhcCCCceEEec
Q 001705 924 SFASRIQALRYLSIRWGIDLSKMVVFVGEKGDTDYEDLLVGLHKTLILR 972 (1024)
Q Consensus 924 ~gasKg~AL~~L~~~~gi~~~~vvafiGDs~N~D~~~Ml~~ag~gVaMg 972 (1024)
.+--|...+.++++.+++++++++.+ ||+.+ | ++.=+.+|...+.-
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmI-GDs~s-D-i~aAk~aGi~~I~v 147 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVI-GDRET-D-VQLAENMGIKGIRY 147 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEE-cCCHH-H-HHHHHHCCCeEEEE
Confidence 33456678989999999999999996 99998 9 88878888765544
No 484
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=21.56 E-value=3.6e+02 Score=26.61 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=52.6
Q ss_pred cchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcC-CcEEEecCCCCCCCHHHHHHHHc-CCcEEE
Q 001705 527 SSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKT-KGVFINPALVEPFGLTIIEAAAY-GLPVVA 598 (1024)
Q Consensus 527 ~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~-~dv~v~ps~~Egfgl~llEAmA~-G~PVVa 598 (1024)
+-++....+...+.++++ .+.|...=..-++.+....|... .+++++|.-+--.+..+..|++. .+|+|=
T Consensus 26 Tl~di~~~~~~~a~~~g~--~v~~~QSN~Eg~Lid~Ihea~~~~~~IvINpga~THTSvAlrDAi~av~iP~vE 97 (146)
T COG0757 26 TLEDIEADLEEEAAKLGV--EVEFRQSNHEGELIDWIHEARGKAGDIVINPGAYTHTSVALRDAIAAVSIPVVE 97 (146)
T ss_pred cHHHHHHHHHHHHHHcCc--eEEEEecCchHHHHHHHHHhhccCCeEEEcCccchhhHHHHHHHHHhcCCCEEE
Confidence 445566677777777776 46676665566888888888654 34999998888888999999877 889874
No 485
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=21.14 E-value=92 Score=39.33 Aligned_cols=41 Identities=10% Similarity=0.204 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHHhcCCC
Q 001705 766 TFQATIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIRRCTVN 810 (1024)
Q Consensus 766 ~i~~~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~~~~i~ 810 (1024)
.+-+..++++++|++. |+++++.||-+...++.+.+++||+
T Consensus 537 ~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGId 577 (713)
T COG2217 537 ELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGID 577 (713)
T ss_pred CCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcChH
Confidence 5668899999999998 9999999999999999999999984
No 486
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=21.12 E-value=2.1e+02 Score=28.27 Aligned_cols=105 Identities=16% Similarity=0.256 Sum_probs=65.9
Q ss_pred ccchHHHHHHHHHHHHcCCCCCEEeCCCCCCCCHHHHHHHhhcCC-cEEEecCCCCCCCHHHHHHHHc-CCcEEEcC--C
Q 001705 526 NSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTK-GVFINPALVEPFGLTIIEAAAY-GLPVVATK--N 601 (1024)
Q Consensus 526 ~~~~~~~~~i~~~i~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~-dv~v~ps~~Egfgl~llEAmA~-G~PVVat~--~ 601 (1024)
.+-+.+...+.+.+.++++ .+.|...=..-++.+....|.... .++++|.-+--.++.+..|+++ ++|+|=-- +
T Consensus 24 ~tl~~i~~~l~~~a~~~g~--~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~~~P~VEVHiSN 101 (140)
T cd00466 24 TTLADIEALLRELAAELGV--EVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAVSIPVIEVHISN 101 (140)
T ss_pred CCHHHHHHHHHHHHHHcCC--EEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcCCCCEEEEecCC
Confidence 3446667777788887776 477766655667888888875443 4677887777778999999877 89987432 1
Q ss_pred CCchhh------hccCCcEEEeCCCCHHHHHHHHHHHH
Q 001705 602 GGPVDI------LKALNNGLLVDPHDQNAIADALLKLL 633 (1024)
Q Consensus 602 Gg~~ei------i~~~~~Gllv~p~d~~~la~aI~~ll 633 (1024)
--.+|- +..-..|.+.- .-.+...-||..++
T Consensus 102 i~aRE~fR~~S~is~~~~G~I~G-~G~~gY~lAl~~~~ 138 (140)
T cd00466 102 IHAREEFRHHSVISPVATGVIAG-LGADGYRLALEALA 138 (140)
T ss_pred cccccccccccccccceeEEEEe-CCHHHHHHHHHHHH
Confidence 112332 22223455542 23556666666554
No 487
>PRK10037 cell division protein; Provisional
Probab=20.69 E-value=1.1e+02 Score=33.30 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=21.1
Q ss_pred CChH--HHHHHHHHHHHHcCCCceEEEEEec
Q 001705 194 TGGQ--VKYVVELARALANTEGVYRVDLLTR 222 (1024)
Q Consensus 194 ~GG~--~~~v~~La~aLa~~g~v~~V~vlt~ 222 (1024)
-||. ...+.+||.+|+++| ++|-|+=.
T Consensus 10 KGGvGKTT~a~nLA~~La~~G--~rVLlID~ 38 (250)
T PRK10037 10 RGGVGTTSITAALAWSLQMLG--ENVLVIDA 38 (250)
T ss_pred CCCccHHHHHHHHHHHHHhcC--CcEEEEeC
Confidence 3454 445689999999999 99999844
No 488
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=20.64 E-value=3.2e+02 Score=31.09 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=32.7
Q ss_pred EEeCCCCCCCCHHHHHHHhhcCCcEEEecCCCCCCCHHHHHHHHcCCcEEEcC
Q 001705 548 VAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATK 600 (1024)
Q Consensus 548 V~~~g~~~~~el~~ly~~A~~~~dv~v~ps~~Egfgl~llEAmA~G~PVVat~ 600 (1024)
+.+.|..+-.++.++++.| +++|-.- + |..= =|.|.|+|+|+=.
T Consensus 244 ~~l~g~~sL~el~ali~~a----~l~I~nD---T-Gp~H-lAaA~g~P~valf 287 (348)
T PRK10916 244 RNLAGETQLEQAVILIAAC----KAIVTND---S-GLMH-VAAALNRPLVALY 287 (348)
T ss_pred eeccCCCCHHHHHHHHHhC----CEEEecC---C-hHHH-HHHHhCCCEEEEE
Confidence 5567887888999999999 8988652 2 2222 2788999999854
No 489
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=20.50 E-value=1.4e+02 Score=30.62 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhccCCCCeEEEEECCCCHHHHHHHHH
Q 001705 770 TIKNVMKAAGLSLGLGRVGFILVTGSSLGETMEAIR 805 (1024)
Q Consensus 770 ~~~~~l~~l~~~~~~~gi~~viaTGR~~~~~~~~l~ 805 (1024)
..+++|.--+++ |-.+++.|||+...+...-+
T Consensus 118 vA~qLI~MHq~R----GD~i~FvTGRt~gk~d~vsk 149 (237)
T COG3700 118 VARQLIDMHQRR----GDAIYFVTGRTPGKTDTVSK 149 (237)
T ss_pred HHHHHHHHHHhc----CCeEEEEecCCCCcccccch
Confidence 345555555554 88999999999876554433
Done!