Query 001705
Match_columns 1024
No_of_seqs 495 out of 4383
Neff 7.7
Searched_HMMs 29240
Date Tue Mar 26 15:45:54 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001705.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1004-1008//hhsearch_pdb/001705hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 1.0 1 1 466.6 40.2 470 166-670 275-770 (816)
2 2r60_A Glycosyl transferase, g 1.0 1 1 383.0 36.8 445 167-675 5-465 (499)
3 3fro_A GLGA glycogen synthase; 1.0 1 1 364.9 36.5 421 168-672 1-433 (439)
4 3vue_A GBSS-I, granule-bound s 1.0 1 1 357.5 29.6 450 166-671 6-513 (536)
5 3c48_A Predicted glycosyltrans 1.0 1 1 353.5 38.5 412 167-674 18-430 (438)
6 2qzs_A Glycogen synthase; glyc 1.0 1 1 334.6 28.3 438 170-673 1-480 (485)
7 1rzu_A Glycogen synthase 1; gl 1.0 1 1 333.8 28.1 440 170-674 1-480 (485)
8 3okp_A GDP-mannose-dependent a 1.0 1 1 321.8 31.3 372 168-674 3-384 (394)
9 2iw1_A Lipopolysaccharide core 1.0 1 1 317.1 26.1 369 170-671 1-373 (374)
10 2jjm_A Glycosyl transferase, g 1.0 1 1 316.3 35.4 361 192-673 24-389 (394)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=466.57 Aligned_cols=470 Identities=25% Similarity=0.426 Sum_probs=353.2
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHHHHCCCCCEEE----EEEECCCCCCCCCCCC
Q ss_conf 89861899993145434577777998988807899999--------99999807991389----9981677899877666
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVE--------LARALANTEGVYRV----DLLTRQIASPEVDSSY 233 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~--------La~aLa~~g~v~~V----~vlt~~~~~p~~~~~y 233 (1024)
.+|.|+|+|||.||++++.++ +|+ ||+||++.||++ |+++|+++| |+| +|+|+.+.++ ....|
T Consensus 275 ~~~~~~i~~is~hg~~~~~~~-lG~-~dtGGq~vyV~e~~~al~~ela~~L~~~G--~~V~~~V~v~Tr~~~~~-~g~~y 349 (816)
T 3s28_A 275 VPMVFNVVILSPHGYFAQDNV-LGY-PDTGGQVVYILDQVRALEIEMLQRIKQQG--LNIKPRILILTRLLPDA-VGTTC 349 (816)
T ss_dssp SCCCCEEEEECCSSCCCSSSC-TTS-TTCSHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCCEEEEEEECCTTC-TTSST
T ss_pred CCCEEEEEEECCCCCCCCCCC-CCC-CCCCCCEEEHHHHHHHHHHHHHHHHHHCC--CCCCEEEEEEECCCCCC-CCCCC
T ss_conf 885248999847766575445-788-88898365099899899999999999779--96200168996898787-77765
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 98753357999999978809998048998----77644346773148999999999999999987541499999634999
Q 001705 234 GEPNEMLSCPSDGTGSCGAYIIRIPCGAR----DKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIH 309 (1024)
Q Consensus 234 ~~~~e~l~~~~~~~~~~gv~i~rip~~~~----~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh 309 (1024)
..+.+.+ ...+|++|+|+|+++. ..|++++.+|+++..|...++..+... ...+|||||
T Consensus 350 ~~~~e~i------~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~-----------~~~~PDVIH 412 (816)
T 3s28_A 350 GERLERV------YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKE-----------LNGKPDLII 412 (816)
T ss_dssp TSSEEEC------TTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHH-----------CSSCCSEEE
T ss_pred CCCCEEE------CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----------CCCCCEEEE
T ss_conf 7751155------48697599996687766543345657788999999999999999996-----------589973999
Q ss_pred ECCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH
Q ss_conf 76987479999998029997999957996003699873199970033689999989999973111798992798999999
Q 001705 310 GHYADAGEVAAHLSGALNVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQ 389 (1024)
Q Consensus 310 ~h~~~~~~~a~~l~~~~~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~ 389 (1024)
+|++..++++.++++.+++|+|+|.|+++..+.. ..+..+..+...|++..++..|+.+++.||.|+++|..+++.+
T Consensus 413 sH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~---~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l 489 (816)
T 3s28_A 413 GNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGS 489 (816)
T ss_dssp EEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHST---TTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCC
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH
T ss_conf 6885389999999997599889998166300122---2330155677888898888899999984999998889999999
Q ss_pred HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 70026862678999998540474345888996899599998999644689899831100125765455579983058875
Q 001705 390 WGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVM 469 (1024)
Q Consensus 390 ~~l~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 469 (1024)
...+..+....... .....+.+...+.+.+++.|||||+|.+.|.|..... ..+....+ ........|.......
T Consensus 490 ~~~~~~y~~~~~~~-~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~--~Rl~~~~~--~i~~~l~~p~~~r~~l 564 (816)
T 3s28_A 490 KETVGQYESHTAFT-LPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK--RRLTKFHS--EIEELLYSDVENKEHL 564 (816)
T ss_dssp SSSCCTTGGGSSEE-ETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTT--TCCGGGHH--HHHHHHHCSCCBTTEE
T ss_pred HHHHHHHHHHHCCC-CCHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCHHH--HHHHHCCC--CCCCCCCCHHHHHHHH
T ss_conf 98887764420135-4112210122446778879988974788728631035--54320023--2000124605677774
Q ss_pred HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
Q ss_conf 32079999589998389987899999999941415579983999-99159993000133158999999999871999977
Q 001705 470 RFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQV 548 (1024)
Q Consensus 470 ~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V 548 (1024)
.+...+++++|+++||+++.||++.+++|+..+... .+++.| |+|++++......+...+..++.++++++++.++|
T Consensus 565 g~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~--~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V 642 (816)
T 3s28_A 565 CVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL--RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQF 642 (816)
T ss_dssp SCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH--HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBE
T ss_pred CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH--CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 445789983999974472217999999999997855--799699999688753334335699999999999974998728
Q ss_pred EECCCCCC----CCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHH
Q ss_conf 83999998----97999999723189399923898988899999998499699818887211130498589939999999
Q 001705 549 AYPKHHKQ----SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNA 624 (1024)
Q Consensus 549 ~~~g~~~~----~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~ 624 (1024)
.|+|+.+. +++..+|..++ |+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|++++|.|+++
T Consensus 643 ~flG~~~~~v~~~eL~~~~~~aa---DvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~ 719 (816)
T 3s28_A 643 RWISSQMDRVRNGELYRYICDTK---GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQ 719 (816)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTT---CEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHCC---EEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCHHH
T ss_conf 98167556689999999999569---099988875576499999998099999968987699970698189968999999
Q ss_pred HHHHHHHHH----HCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHH
Q ss_conf 999999997----39999999999999999-60999999999999999836
Q 001705 625 IADALLKLL----ADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSR 670 (1024)
Q Consensus 625 la~aI~~ll----~d~~~~~~~~~~a~~~~-~~fsw~~~a~~~l~~l~~~~ 670 (1024)
++++|.+++ .+++.++++++++++.+ ++|||+.++++|+++|....
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 999999999875269999999999999999986899999999999999976
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=383.04 Aligned_cols=445 Identities=31% Similarity=0.513 Sum_probs=317.2
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98618999931454345777779989888078999999999980799138999816778998776669875335799999
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~ 246 (1024)
.++|||++++.++++..+++.+...+..||.++++.+|+++|++.| |+|+|+|.....+.. ..|....+.+
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~-~~~~~~~~~~------ 75 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRIKDENW-PEFSGEIDYY------ 75 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT--CEEEEEEECCCBTTB-GGGCCSEEEC------
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCC--CEEEEEECCCCCCCC-CCHHHHHHHC------
T ss_conf 4452499996577744344234788887994334999999998559--848999578872336-5113567750------
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCC
Q ss_conf 99788099980489987764434677314899999999999999998754149999963499976987479999998029
Q 001705 247 TGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 247 ~~~~gv~i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
...+|+.+++++..+. .+..+..+|.++..|...+...+.. . ..+||+||+|++..+.++.++++..
T Consensus 76 ~~~~gv~v~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~-------~-----~~~~Divh~~~~~~~~~~~~~~~~~ 142 (499)
T 2r60_A 76 QETNKVRIVRIPFGGD-KFLPKEELWPYLHEYVNKIINFYRE-------E-----GKFPQVVTTHYGDGGLAGVLLKNIK 142 (499)
T ss_dssp TTCSSEEEEEECCSCS-SCCCGGGCGGGHHHHHHHHHHHHHH-------H-----TCCCSEEEEEHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHHHH-------C-----CCCCCEEEECCCCCHHHHHHHHHHC
T ss_conf 6789817998257776-7768899999899999999999985-------3-----8998889975786207999988735
Q ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHC--CCCC----CHHH
Q ss_conf 997999957996003699873199970033689999989999973111798992798999999700--2686----2678
Q 001705 327 NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGL--YDGF----DLKL 400 (1024)
Q Consensus 327 ~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l--~~~f----~~~~ 400 (1024)
++|+|++.|+........+...+.....+...+++..+...++.+++.+|.|+++|+...+.+... |+.+ ..
T Consensus 143 ~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~-- 220 (499)
T 2r60_A 143 GLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDD-- 220 (499)
T ss_dssp CCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCG--
T ss_pred CCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCCCC--
T ss_conf 996899806840011134414787761245567888999999999846899998888999999864124642234678--
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-----CCC
Q ss_conf 999998540474345888996899599998999644689899831100125765455579983058875320-----799
Q 001705 401 ERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFF-----TNP 475 (1024)
Q Consensus 401 ~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~~~ 475 (1024)
.++.|||||+|...|.+... .........++. ..+
T Consensus 221 -------------------~ki~vi~ngvd~~~~~~~~~---------------------~~~~~~~r~~~~~~~~~~~~ 260 (499)
T 2r60_A 221 -------------------DKFSVIPPGVNTRVFDGEYG---------------------DKIKAKITKYLERDLGSERM 260 (499)
T ss_dssp -------------------GGEEECCCCBCTTTSSSCCC---------------------HHHHHHHHHHHHHHSCGGGT
T ss_pred -------------------CCEEEECCCCCHHHCCCCCH---------------------HHHHHHHHHHHCCCCCCCCC
T ss_conf -------------------87699879958665686410---------------------35678999883643345688
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCC----CCCCCCCHHHHHHHHHHHHHCCCCCCEEEC
Q ss_conf 9958999838998789999999994141557998399999159993----000133158999999999871999977839
Q 001705 476 HKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRDDI----EDMSNSSSVVLTTVLKLIDKYDLYGQVAYP 551 (1024)
Q Consensus 476 ~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~~~----~~l~~~~~~~~~~i~~li~~~~l~~~V~~~ 551 (1024)
+.++|+++||+.+.||++.+++|+..+....+.....+|+|+.+.. ..+......|..++.+++.++++.++|.|+
T Consensus 261 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~ 340 (499)
T 2r60_A 261 ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF 340 (499)
T ss_dssp TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEE
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 87689996068501588999999999987388865999987888753221111320147999999999864998609987
Q ss_pred CCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 99998979999997231893999238989888999999984996998188872111304985899399999999999999
Q 001705 552 KHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLK 631 (1024)
Q Consensus 552 g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ 631 (1024)
|+++.+++..+|+.|..+.|++|+||..|+||++++||||||+|||+++.||..|++.++.+|++++|.|+++++++|.+
T Consensus 341 G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ 420 (499)
T 2r60_A 341 PLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLK 420 (499)
T ss_dssp ECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 88998999999995576798899786458979689999976998898168877887347860799589999999999999
Q ss_pred HHHCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 97399999999999999996-099999999999999983614999
Q 001705 632 LLADKNMWSECRKNGLKNIH-RFSWPEHCRNYLSHVEHSRNRHPN 675 (1024)
Q Consensus 632 ll~d~~~~~~~~~~a~~~~~-~fsw~~~a~~~l~~l~~~~~~~~~ 675 (1024)
++++++.+.++++++++.+. +|||+.++++|+++|.++......
T Consensus 421 ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 465 (499)
T 2r60_A 421 AFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465 (499)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred HHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 986999999999999999987579999999999999998732133
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=364.87 Aligned_cols=421 Identities=23% Similarity=0.305 Sum_probs=307.9
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC-----CCC--CCCCC
Q ss_conf 86189999314543457777799898880789999999999807991389998167789987766-----698--75335
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSS-----YGE--PNEML 240 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~-----y~~--~~e~l 240 (1024)
++|||++++.+.. |+..||.++++.+|+++|+++| |+|+|+|+.......... ++. .....
T Consensus 1 r~MkIl~v~~~~~----------p~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (439)
T 3fro_A 1 RHMKVLLLGFEFL----------PVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVS 68 (439)
T ss_dssp CCCEEEEECSCCT----------TSCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCCC----------CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEE
T ss_conf 9528999950217----------7666889999999999999779--859998367788236552463014765310243
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHH
Q ss_conf 799999997880999804899877644346773-1489999999999999999875414999996349997698747999
Q 001705 241 SCPSDGTGSCGAYIIRIPCGARDKYIAKESLWP-YIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVA 319 (1024)
Q Consensus 241 ~~~~~~~~~~gv~i~rip~~~~~~~~~k~~lw~-~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a 319 (1024)
. ...+|+.+++++. .++.+..+++ +...+..........+.+.+...+.. ..+||+||+|++..+.++
T Consensus 69 ~-----~~~~gv~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Dii~~~~~~~~~~~ 137 (439)
T 3fro_A 69 Y-----EERGNLRIYRIGG----GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE--EPLPDVVHFHDWHTVFAG 137 (439)
T ss_dssp E-----EEETTEEEEEEES----GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTT--SCCCSEEEEESGGGHHHH
T ss_pred E-----CCCCCCEEEEECC----HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHH
T ss_conf 1-----2578840899353----2205212466776300232578999999999997444--799819994640343458
Q ss_pred HHHHCCCCCCEEEEECCCCHHHHHH-HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCH
Q ss_conf 9998029997999957996003699-873199970033689999989999973111798992798999999700268626
Q 001705 320 AHLSGALNVPMVLTGHSLGRNKFEQ-LLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDL 398 (1024)
Q Consensus 320 ~~l~~~~~ipiV~t~H~l~~~~~~~-l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~ 398 (1024)
.++++..++|+|++.|+.....+.. ........... ....+..++..++.+|.|+++|+...+..++.++.
T Consensus 138 ~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~--- 209 (439)
T 3fro_A 138 ALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELA-----PYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRN--- 209 (439)
T ss_dssp HHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGGC-----CSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGG---
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCC-----CCCEEEHHHHHHHHCCEEEECCHHHHHHHHHHHHH---
T ss_conf 9886526997899965344456856774745510035-----66632076665543458872689899998605650---
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 78999998540474345888996899599998999644689899831100125765455579983058875320799995
Q 001705 399 KLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKP 478 (1024)
Q Consensus 399 ~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 478 (1024)
...++.+||||+|.+.|.+.... ............++..+++ +
T Consensus 210 -------------------~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~-~ 252 (439)
T 3fro_A 210 -------------------FEGKITYVFNGIDCSFWNESYLT-----------------GSRDERKKSLLSKFGMDEG-V 252 (439)
T ss_dssp -------------------GTTSEEECCCCCCTTTSCGGGSC-----------------SCHHHHHHHHHHHHTCCSC-E
T ss_pred -------------------CCCCEEECCCCCCCHHCCCCCCC-----------------CHHHHHHHHHHHHCCCCCC-C
T ss_conf -------------------47734534788880430843221-----------------1045669999997399998-4
Q ss_pred EEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC
Q ss_conf 899983899-87899999999941415579983999-9915999300013315899999999987199997783999998
Q 001705 479 TILALSRPD-PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQ 556 (1024)
Q Consensus 479 ~Il~vgRld-~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~ 556 (1024)
+|+++||+. +.||++.+++|+..+......+++.| |+|+++ ..+...+.+++.+++ +.+.|.|+++.
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~---------~~~~~~l~~~~~~~~--~~~~~~g~~~~ 321 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD---------PELEGWARSLEEKHG--NVKVITEMLSR 321 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC---------HHHHHHHHHHHHHCT--TEEEECSCCCH
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC---------HHHHHHHHHHHHHCC--CEEEECCCCCH
T ss_conf 7999733353436699999999999854667871899980797---------267789999875069--89997287998
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHH-C
Q ss_conf 979999997231893999238989888999999984996998188872111304985899399999999999999973-9
Q 001705 557 SDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLA-D 635 (1024)
Q Consensus 557 ~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~-d 635 (1024)
+++..+|+.| |++|+||..|+||++++||||||+|||+++.|+..|++.++ +|++++|.|+++++++|.++++ +
T Consensus 322 ~~~~~~~~~a----dv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 322 EFVRELYGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKALELS 396 (439)
T ss_dssp HHHHHHHTTC----SEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECC-CEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 8999999977----99995898788618999999779976973788743168758-448968899899999999998319
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999996099999999999999983614
Q 001705 636 KNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNR 672 (1024)
Q Consensus 636 ~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~~~ 672 (1024)
++.++++++++++.+++|||+.++++|+++|++++.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999876472999999999999999975
No 4
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=357.45 Aligned_cols=450 Identities=18% Similarity=0.175 Sum_probs=280.1
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 8986189999314543457777799898880789999999999807991389998167789987766698753357999-
Q 001705 166 SSRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPS- 244 (1024)
Q Consensus 166 ~~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~- 244 (1024)
+..+|||||++++.. | -..+||...++..|+++|+++| |+|.|+++....-.-........+.-....
T Consensus 6 ~~~~MkIl~vs~E~~--------P-~~K~GGLadvv~~L~~aL~~~G--~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~ 74 (536)
T 3vue_A 6 HHHHMNVVFVGAEMA--------P-WSKTGGLGDVLGGLPPAMAANG--HRVMVISPRYDQYKDAWDTSVVAEIKVADRY 74 (536)
T ss_dssp --CCCEEEEECSCBT--------T-TBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCSCCTTCEEEEEEEEEEETTEE
T ss_pred CCCCCEEEEEEEECC--------C-HHCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCHHHHHHCCCCEEEEEEECCCE
T ss_conf 899738999987243--------1-2126769999999999999769--9699990485022242265168999836833
Q ss_pred -----CCCCCCCEEEEEECCCCCCCCCCC------CCCCC--CHHHHHHHHHHHH---HHHHHHHHHHHC-------CCC
Q ss_conf -----999978809998048998776443------46773--1489999999999---999999875414-------999
Q 001705 245 -----DGTGSCGAYIIRIPCGARDKYIAK------ESLWP--YIHEFVDGALNHI---VNMARAIGEQVN-------GGK 301 (1024)
Q Consensus 245 -----~~~~~~gv~i~rip~~~~~~~~~k------~~lw~--~~~~f~~~~l~~~---~~~~~~l~~~~~-------~g~ 301 (1024)
.....+|+.++.+... .++.+ ..+.. ....+.+...++. ......+. .+. .+.
T Consensus 75 ~~~~~~~~~~~gv~~y~id~~---~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~-~l~~~~~~~~~~~ 150 (536)
T 3vue_A 75 ERVRFFHCYKRGVDRVFIDHP---SFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPR-ILNLNNNPYFKGT 150 (536)
T ss_dssp EEEEEEECEETTEEEEEEECT---TTTCC------------------CHHHHHHHHHHHHHHHHHH-HCCCCCCTTCCSC
T ss_pred EEEEEEEEEECCCEEEEECCH---HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCCHHHHCC
T ss_conf 789999999789559996475---541233466778666887567664179999999999999999-7302653011014
Q ss_pred CCCCEEEEECCCCHHHHHHHHHCC-------CCCCEEEEECCCCHHH---HHHHHHCCCCCCCHHHHHH---------HH
Q ss_conf 996349997698747999999802-------9997999957996003---6998731999700336899---------99
Q 001705 302 PTWPYVIHGHYADAGEVAAHLSGA-------LNVPMVLTGHSLGRNK---FEQLLKQGRLPKDINASYK---------IM 362 (1024)
Q Consensus 302 ~~~pDvIh~h~~~~~~~a~~l~~~-------~~ipiV~t~H~l~~~~---~~~l~~~g~~~~~i~~~y~---------~~ 362 (1024)
...+||+|+|+|++++++.+++.. .++|+|+|+|++.... ...+...+.... ...... ..
T Consensus 151 ~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 229 (536)
T 3vue_A 151 YGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSER-FRSSFDFIDGYDTPVEG 229 (536)
T ss_dssp CCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGG-GHHHHEEEETTTSTTCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHH-HCCHHHHHHCCCCCCCC
T ss_conf 79987999776048999999998640233202563454215742245555333644189656-40103333114641003
Q ss_pred HHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 98999997311179899279899999970026862678999998540474345888996899599998999644689899
Q 001705 363 RRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGG 442 (1024)
Q Consensus 363 ~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~ 442 (1024)
..+..++..+..||.|+|+|+.+++++...+.. .. +.. ......++.+||||||.+.|.|...
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~-g~------------~l~-~~~~~~~i~~I~NGiD~~~~~p~~d--- 292 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISGIAR-GC------------ELD-NIMRLTGITGIVNGMDVSEWDPSKD--- 292 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCC-CS------------SSC-CCSCCCSCEECCCCCCTTTSCTTTC---
T ss_pred CCHHHHHHHHHHCCEEEECCHHHHHHHHCCCCC-CC------------CCC-CCCCCCCEEEEECCCCHHHCCCCCC---
T ss_conf 304399999985367787687885343126344-52------------200-1254578189979966421488776---
Q ss_pred CCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHC--CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 831100125765-4555799830588753207--9999589998389987899999999941415579983999991599
Q 001705 443 DTDLKSLIGNDR-TQSKRNLPPMWSEVMRFFT--NPHKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTLILGNRD 519 (1024)
Q Consensus 443 ~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~--~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~LIiG~~~ 519 (1024)
..+........ ...+. ........++.. .++.|+|+++||+.+.||++.+++|+.++. .+.+++ +++|.|+
T Consensus 293 -~~~~~~~~~~~~~~~K~--~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~--~~~~~l-~l~G~G~ 366 (536)
T 3vue_A 293 -KYITAKYDATTAIEAKA--LNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELM--QEDVQI-VLLGTGK 366 (536)
T ss_dssp -SSSSCCCCTTTHHHHHH--HHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHT--TSSCEE-EEECCBC
T ss_pred -CCCCCCCCHHHHHHHHH--HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH--HHCCEE-EEEECCC
T ss_conf -21001444345556567--77999998619987999758999965302378478999999768--549859-9995467
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEC
Q ss_conf 93000133158999999999871999977839999989799999972318939992389898889999999849969981
Q 001705 520 DIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVAT 599 (1024)
Q Consensus 520 ~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat 599 (1024)
. .....+......+ ..++.+.+..+.+++..+|+.| |+||+||++||||++++|||+||+|||+|
T Consensus 367 ~---------~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~a----D~~v~PS~~E~fgl~~lEAma~G~PvI~s 431 (536)
T 3vue_A 367 K---------KFEKLLKSMEEKY--PGKVRAVVKFNAPLAHLIMAGA----DVLAVPSRFEPCGLIQLQGMRYGTPCACA 431 (536)
T ss_dssp H---------HHHHHHHHHHHHS--TTTEEEECSCCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHTTCCEEEC
T ss_pred C---------HHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHH----HEEECCCCCCCCCHHHHHHHHCCCCEEEC
T ss_conf 2---------6899999987616--8854999714688899999862----34253465689888999999869989990
Q ss_pred CCCCCHHHHCCCCCEE----------EECCCCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 8887211130498589----------9399999999999999973--999999999999999960999999999999999
Q 001705 600 KNGGPVDILKALNNGL----------LVDPHDQNAIADALLKLLA--DKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVE 667 (1024)
Q Consensus 600 ~~Gg~~eii~~~~~Gl----------lv~p~d~~~la~aI~~ll~--d~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~ 667 (1024)
++||+.|+|.++.+|+ +++|.|+++++++|.+++. +.+.|+++++++++ ++|||+..+++|+++|+
T Consensus 432 ~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~--~~fSW~~~A~~y~~ly~ 509 (536)
T 3vue_A 432 STGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMN--QDLSWKGPAKNWENVLL 509 (536)
T ss_dssp SCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHH--SCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH--HCCCHHHHHHHHHHHHH
T ss_conf 7998222022798763246677751587999999999999999985295999999999877--35999999999999999
Q ss_pred HHHH
Q ss_conf 8361
Q 001705 668 HSRN 671 (1024)
Q Consensus 668 ~~~~ 671 (1024)
++..
T Consensus 510 ~L~~ 513 (536)
T 3vue_A 510 GLGV 513 (536)
T ss_dssp TTCC
T ss_pred HHHH
T ss_conf 8604
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=353.47 Aligned_cols=412 Identities=24% Similarity=0.322 Sum_probs=300.6
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98618999931454345777779989888078999999999980799138999816778998776669875335799999
Q 001705 167 SRNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDG 246 (1024)
Q Consensus 167 ~~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~ 246 (1024)
.+.|||++++.++. |...+.....||.+.++.+|+++|.+.| |+|+|+|....... ....
T Consensus 18 ~~mmkIl~i~~~~~----p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~------~~~~-------- 77 (438)
T 3c48_A 18 GSHMRVAMISMHTS----PLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQ------GEIV-------- 77 (438)
T ss_dssp -CCCEEEEECTTSC----TTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGG------CSEE--------
T ss_pred CCHHEEEEEEEECC----CCCCCCCCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCC------CCCC--------
T ss_conf 00203345775325----6346787887879999999999999669--97999954788777------5400--------
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCC
Q ss_conf 99788099980489987764434677314899999999999999998754149999963499976987479999998029
Q 001705 247 TGSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGAL 326 (1024)
Q Consensus 247 ~~~~gv~i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~ 326 (1024)
...+|+.+++++..+. ..+.+..++..+..|...++... +.. . .+||+||+|++..+.++.++++..
T Consensus 78 ~~~~~v~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~---~---~~~Div~~~~~~~~~~~~~~~~~~ 144 (438)
T 3c48_A 78 RVAENLRVINIAAGPY-EGLSKEELPTQLAAFTGGMLSFT------RRE---K---VTYDLIHSHYWLSGQVGWLLRDLW 144 (438)
T ss_dssp EEETTEEEEEECCSCS-SSCCGGGGGGGHHHHHHHHHHHH------HHH---T---CCCSEEEEEHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHHHHH------HHC---C---CCCCEEEECCCCHHHHHHHHHHHC
T ss_conf 2568748999247875-43236677899999999999999------841---6---899989947755789999999974
Q ss_pred CCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 99799995799600369987319997003368999998999997311179899279899999970026862678999998
Q 001705 327 NVPMVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 327 ~ipiV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~ 406 (1024)
++|+|++.|+...... ............ .+...++..++.+|.|+++|+...+.+...++ +..
T Consensus 145 ~~p~v~~~h~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g-~~~-------- 207 (438)
T 3c48_A 145 RIPLIHTAHTLAAVKN------SYRDDSDTPESE--ARRICEQQLVDNADVLAVNTQEEMQDLMHHYD-ADP-------- 207 (438)
T ss_dssp TCCEEEECSSCHHHHS------CC----CCHHHH--HHHHHHHHHHHHCSEEEESSHHHHHHHHHHHC-CCG--------
T ss_pred CCCEEEEECCCCCCCC------CCCCCCCCCCHH--HHHHHHHHHHHCCCEEEECCHHHHHHHHHHHC-CCH--------
T ss_conf 9998999427740111------110026773157--89999999984089999847999999999858-982--------
Q ss_pred HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 54047434588899689959999899964468989983110012576545557998305887532079999589998389
Q 001705 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRP 486 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRl 486 (1024)
.++.+||||+|...|.+... ........++...+++++|+++||+
T Consensus 208 -------------~k~~vi~ngvd~~~~~~~~~----------------------~~~~~~r~~~~~~~~~~~i~~~G~~ 252 (438)
T 3c48_A 208 -------------DRISVVSPGADVELYSPGND----------------------RATERSRRELGIPLHTKVVAFVGRL 252 (438)
T ss_dssp -------------GGEEECCCCCCTTTSCCC--------------------------CHHHHHHTTCCSSSEEEEEESCB
T ss_pred -------------HHEEEECCCCCCCCCCCCCC----------------------CHHHHHHHHCCCCCCCCEEEEEEEE
T ss_conf -------------02688269766110478662----------------------0245668860899898489997431
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
Q ss_conf 987899999999941415579983999-9915999300013315899999999987199997783999998979999997
Q 001705 487 DPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 565 (1024)
Q Consensus 487 d~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~ 565 (1024)
.+.||++.+++|+..+....+..++.| |+|+... .+.....+.+++.++++.++|.|+|+++.+++..+|+.
T Consensus 253 ~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~-------~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~ 325 (438)
T 3c48_A 253 QPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSG-------PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRA 325 (438)
T ss_dssp SGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC-------CCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHH
T ss_conf 56679899999999999639776669999818887-------77278999999997198786898588985889999985
Q ss_pred HHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 23189399923898988899999998499699818887211130498589939999999999999997399999999999
Q 001705 566 AAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 566 A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+++++++.+.+++++
T Consensus 326 a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~ 401 (438)
T 3c48_A 326 A----DIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGED 401 (438)
T ss_dssp C----SEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred C----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 8----999987402687559999987699889627987257750797279879999999999999997598999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999609999999999999998361499
Q 001705 646 GLKNIHRFSWPEHCRNYLSHVEHSRNRHP 674 (1024)
Q Consensus 646 a~~~~~~fsw~~~a~~~l~~l~~~~~~~~ 674 (1024)
+++.+..|+|+.++++|+++|+++..+..
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99998857999999999999999863136
No 6
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=334.64 Aligned_cols=438 Identities=17% Similarity=0.175 Sum_probs=279.2
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC----------CCCCCCCC
Q ss_conf 18999931454345777779989888078999999999980799138999816778998776----------66987533
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS----------SYGEPNEM 239 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~----------~y~~~~e~ 239 (1024)
|||++++.+.. | .+..||.+.++.+|+++|+++| |+|+|+|.......... .++.....
T Consensus 1 MkIl~v~~~~~--------P-~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (485)
T 2qzs_A 1 MQVLHVCSEMF--------P-LLKTGGLADVIGALPAAQIADG--VDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITL 69 (485)
T ss_dssp CEEEEECSCBT--------T-TBCSSHHHHHHHHHHHHHHHTT--CEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEE
T ss_pred CEEEEEEEECC--------C-CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEE
T ss_conf 96999964104--------6-6567739999999999999749--87899944764345434564057874156871799
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCC-CC------CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 5799999997880999804899877644346-77------3148999999999999999987541499999634999769
Q 001705 240 LSCPSDGTGSCGAYIIRIPCGARDKYIAKES-LW------PYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY 312 (1024)
Q Consensus 240 l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~-lw------~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~ 312 (1024)
.. ...+|+.+++++... +..... ++ ++...+.. .......+.+.+..+.. ..+||+||+|+
T Consensus 70 ~~-----~~~~gv~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~Divh~~~ 137 (485)
T 2qzs_A 70 LF-----GHYNGVGIYLIDAPH---LYDRPGSPYHDTNLFAYTDNVLR-FALLGWVGAEMASGLDP---FWRPDVVHAHD 137 (485)
T ss_dssp EE-----EEETTEEEEEEECHH---HHCCSSCSSBCTTSCBCTTHHHH-HHHHHHHHHHHTTTSST---TCCCSEEEEET
T ss_pred EE-----EEECCCEEEEEECHH---HCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHCC---CCCCCEEEEEC
T ss_conf 99-----987894799970826---50689876677545778735899-99999999999998456---78997899606
Q ss_pred CCHHHHHHHHH-CCCCCCEEEEECCCCHHHH---HHHHHCCCCCCCHHH-HHHHHHHHHHHHHHHHCCCEEEECCHHHHH
Q ss_conf 87479999998-0299979999579960036---998731999700336-899999899999731117989927989999
Q 001705 313 ADAGEVAAHLS-GALNVPMVLTGHSLGRNKF---EQLLKQGRLPKDINA-SYKIMRRIEAEELGLDASEMVVTSTRQEIE 387 (1024)
Q Consensus 313 ~~~~~~a~~l~-~~~~ipiV~t~H~l~~~~~---~~l~~~g~~~~~i~~-~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~ 387 (1024)
+..+.++.+++ +..++|+|+|.|+...... ..+...|........ ...+......++..++.+|.|+++|+...+
T Consensus 138 ~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 217 (485)
T 2qzs_A 138 WHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAR 217 (485)
T ss_dssp GGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHH
T ss_conf 21337899975436899789994684135788988887649991321311123246546999998753868856889999
Q ss_pred HHHHC-CCCCCHHHHHHHHHHHHCCCCCCCCCC--CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 99700-268626789999985404743458889--9689959999899964468989983110012576545557998-3
Q 001705 388 MQWGL-YDGFDLKLERKLRVRRQRGVSCFGRFM--PRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP-P 463 (1024)
Q Consensus 388 ~~~~l-~~~f~~~~~~~l~~~~~~g~~~~g~~~--~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 463 (1024)
.+... ++ +. ++..+.. +. .++.+||||+|.+.|.+.... .+...+..+. ....+ .
T Consensus 218 ~~~~~~~~-~~--~~~~~~~-----------~~~~~~~~vi~ngvd~~~~~~~~~~----~~~~~~~~~~---~~~~~~~ 276 (485)
T 2qzs_A 218 EITEPQFA-YG--MEGLLQQ-----------RHREGRLSGVLNGVDEKIWSPETDL----LLASRYTRDT---LEDKAEN 276 (485)
T ss_dssp HTTSHHHH-TT--CHHHHHH-----------HHHTTCEEECCCCCCTTTSCTTTCT----TSSSCCCTTC---GGGGHHH
T ss_pred HHHCCCCC-CC--HHHHHHH-----------HCCCCCEEEEECCCCCCCCCCCCCC----CCCCCCCCCC---HHHHHHH
T ss_conf 98540147-24--6899985-----------0667866997469876645864442----2212366300---6577884
Q ss_pred CHHHHHHHHCCC--CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 058875320799--99589998389987899999999941415579983999-991599930001331589999999998
Q 001705 464 MWSEVMRFFTNP--HKPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLID 540 (1024)
Q Consensus 464 ~~~~~~~~~~~~--~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~ 540 (1024)
......++...+ +.++|+++||+.+.||++.+++|+..+.+ + ++.| |+|+++ .++...+.+++.
T Consensus 277 ~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~--~~~l~ivG~g~---------~~~~~~l~~~~~ 343 (485)
T 2qzs_A 277 KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--Q--GGQLALLGAGD---------PVLQEGFLAAAA 343 (485)
T ss_dssp HHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--T--TCEEEEEEEEC---------HHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--C--CCEEEEEECCC---------HHHHHHHHHHHH
T ss_conf 9999987198889997399996667543587999999999862--7--94899992895---------678999999997
Q ss_pred HCCCCCCEE-ECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCC--------
Q ss_conf 719999778-39999989799999972318939992389898889999999849969981888721113049--------
Q 001705 541 KYDLYGQVA-YPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL-------- 611 (1024)
Q Consensus 541 ~~~l~~~V~-~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~-------- 611 (1024)
+++ ++|. |.|+ +.+++..+|+.| |++|+||.+|+||++++||||||+|||+++.||..|++.++
T Consensus 344 ~~~--~~v~~~~g~-~~~~~~~~~~~a----dv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 344 EYP--GQVGVQIGY-HEAFSHRIMGGA----DVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp HST--TTEEEEESC-CHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred HCC--CCEEEECCC-CHHHHHHHHHHC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCC
T ss_conf 579--938994789-979999999758----8999788567876799999977997798789983255215764434446
Q ss_pred -CCEEEECCCCHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf -8589939999999999999997---3999999999999999960999999999999999836149
Q 001705 612 -NNGLLVDPHDQNAIADALLKLL---ADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRH 673 (1024)
Q Consensus 612 -~~Gllv~p~d~~~la~aI~~ll---~d~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~~~~ 673 (1024)
.+|+++++.|+++++++|.+++ .+++.++++++++++ ++|||+.++++|+++|+++...+
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC---
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 66459977899999999999999870899999999999876--32898999999999999865421
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=333.82 Aligned_cols=440 Identities=18% Similarity=0.186 Sum_probs=280.0
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC-----------CCCCCCC
Q ss_conf 18999931454345777779989888078999999999980799138999816778998776-----------6698753
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDS-----------SYGEPNE 238 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~-----------~y~~~~e 238 (1024)
|||++++.+.. | .+..||.+.++.+|+++|+++| |+|+|+|.......... ..+....
T Consensus 1 MkIl~v~~~~~--------P-~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (485)
T 1rzu_A 1 MNVLSVSSEIY--------P-LIKTGGLADVVGALPIALEAHG--VRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKAD 69 (485)
T ss_dssp CEEEEECSCBT--------T-TBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEE
T ss_pred CEEEEEEEEEC--------C-CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCCEEEEEEEECCCEEE
T ss_conf 96999944651--------5-6566549999999999999769--86999915644334443565136899983087478
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCC--CC--CCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 357999999978809998048998--77--6443--46773148999999999999999987541499999634999769
Q 001705 239 MLSCPSDGTGSCGAYIIRIPCGAR--DK--YIAK--ESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHY 312 (1024)
Q Consensus 239 ~l~~~~~~~~~~gv~i~rip~~~~--~~--~~~k--~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~ 312 (1024)
... ...+|+.+++++.... .. .... ...|+.... ....+...+.+.+..++.. .+||+||+|+
T Consensus 70 ~~~-----~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~DiIh~~~ 138 (485)
T 1rzu_A 70 LLE-----VQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWK---RFAALSLAAARIGAGVLPG---WRPDMVHAHD 138 (485)
T ss_dssp EEE-----EEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHH---HHHHHHHHHHHHHTTCSSS---CCCSEEEEEH
T ss_pred EEE-----EEECCCEEEEEECHHHHCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHHHHHHHCCC---CCCCEEEECC
T ss_conf 999-----9966956999848677277766558865666530679---9999999999999986157---9998899646
Q ss_pred CCHHHHHHHHHCC--CCCCEEEEECCCCHHHH---HHHHHCCCCCCCHHH-HHHHHHHHHHHHHHHHCCCEEEECCHHHH
Q ss_conf 8747999999802--99979999579960036---998731999700336-89999989999973111798992798999
Q 001705 313 ADAGEVAAHLSGA--LNVPMVLTGHSLGRNKF---EQLLKQGRLPKDINA-SYKIMRRIEAEELGLDASEMVVTSTRQEI 386 (1024)
Q Consensus 313 ~~~~~~a~~l~~~--~~ipiV~t~H~l~~~~~---~~l~~~g~~~~~i~~-~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~ 386 (1024)
+..+.++.++++. .++|+|++.|+...... ..+...|........ ...+......++..++.+|.|+++|+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~ 218 (485)
T 1rzu_A 139 WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYA 218 (485)
T ss_dssp HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHH
T ss_conf 30557899973103589978999667544687887787343998032020001325623599988864677996087589
Q ss_pred HHHHHC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999700-2686267899999854047434588899689959999899964468989983110012576545557998-30
Q 001705 387 EMQWGL-YDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLP-PM 464 (1024)
Q Consensus 387 ~~~~~l-~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~ 464 (1024)
+.+... |+ +. +...+ +....++.+||||+|.+.|.+.... .+...+..+. ..... ..
T Consensus 219 ~~~~~~~~g-~~--~~~~~-----------~~~~~~~~vi~ngvd~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~ 277 (485)
T 1rzu_A 219 EEILTAEFG-MG--LEGVI-----------GSRAHVLHGIVNGIDADVWNPATDH----LIHDNYSAAN---LKNRALNK 277 (485)
T ss_dssp HHTTSHHHH-TT--CHHHH-----------HTTGGGEEECCCCBCTTTSCTTTCT----TSSSCCBTTB---CTTHHHHH
T ss_pred HHHHCCCCC-CC--HHHHH-----------HHHCCCCEEECCCCCCCCCCCCCCC----CCCCCCCCCC---HHHHHHHH
T ss_conf 998354357-66--58999-----------8606881697089860205886651----1000124324---45678869
Q ss_pred HHHHHHHHCCCC-CCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 588753207999-9589998389987899999999941415579983999-99159993000133158999999999871
Q 001705 465 WSEVMRFFTNPH-KPTILALSRPDPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKY 542 (1024)
Q Consensus 465 ~~~~~~~~~~~~-~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~ 542 (1024)
.....++...++ .++|+++||+.+.||++.+++|+..+.+ + ++.| |+|+++ ..+...+.+++.++
T Consensus 278 ~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~--~~~l~ivG~g~---------~~~~~~l~~~~~~~ 344 (485)
T 1rzu_A 278 KAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--L--GGRLVVLGAGD---------VALEGALLAAASRH 344 (485)
T ss_dssp HHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--T--TCEEEEEECBC---------HHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--C--CCEEEEEECCC---------HHHHHHHHHHHHHC
T ss_conf 99999629888998399997257531287999999999872--6--95699996894---------68999999999867
Q ss_pred CCCCCEE-ECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCC---------C
Q ss_conf 9999778-39999989799999972318939992389898889999999849969981888721113049---------8
Q 001705 543 DLYGQVA-YPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKAL---------N 612 (1024)
Q Consensus 543 ~l~~~V~-~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~---------~ 612 (1024)
+ ++|. |.|+ +.+++..+|+.| |++|+||.+|+||++++||||||+|||+++.||..|++.++ .
T Consensus 345 ~--~~v~~~~g~-~~~~~~~~~~~a----dv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 345 H--GRVGVAIGY-NEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp T--TTEEEEESC-CHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred C--CCEEEECCC-CHHHHHHHHHCC----CEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCC
T ss_conf 8--868994389-979999998529----999978446887779999997799779808998311321565332345677
Q ss_pred CEEEECCCCHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 589939999999999999997---39999999999999999609999999999999998361499
Q 001705 613 NGLLVDPHDQNAIADALLKLL---ADKNMWSECRKNGLKNIHRFSWPEHCRNYLSHVEHSRNRHP 674 (1024)
Q Consensus 613 ~Gllv~p~d~~~la~aI~~ll---~d~~~~~~~~~~a~~~~~~fsw~~~a~~~l~~l~~~~~~~~ 674 (1024)
+|+++++.|+++++++|.+++ .+++.++++++++++ +.|||+.++++|+++|+++....+
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC---
T ss_pred CCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 634867899999999999999872799999999999998--868969999999999998637998
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=321.77 Aligned_cols=372 Identities=17% Similarity=0.210 Sum_probs=277.0
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86189999314543457777799898880789999999999807991389998167789987766698753357999999
Q 001705 168 RNLYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGT 247 (1024)
Q Consensus 168 ~~mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~ 247 (1024)
++|||++++.. ++ |..||.++++.+|+++| .| |+|+|++....... .+.. .
T Consensus 3 ~~mkIl~v~~~---------~~--p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~~~~------~~~~--------~ 53 (394)
T 3okp_A 3 ASRKTLVVTND---------FP--PRIGGIQSYLRDFIATQ--DP--ESIVVFASTQNAEE------AHAY--------D 53 (394)
T ss_dssp -CCCEEEEESC---------CT--TSCSHHHHHHHHHHTTS--CG--GGEEEEEECSSHHH------HHHH--------H
T ss_pred CCCEEEEEECC---------CC--CCCCHHHHHHHHHHHHH--CC--CEEEEEECCCCCCC------HHHH--------C
T ss_conf 88669999276---------68--86551999999999985--69--76899977888642------4443--------3
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCC
Q ss_conf 97880999804899877644346773148999999999999999987541499999634999769874799999980299
Q 001705 248 GSCGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALN 327 (1024)
Q Consensus 248 ~~~gv~i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ 327 (1024)
...++.+++++.... ++.. .+...+ .+.+.+ .+||+||+|..........+.+..+
T Consensus 54 ~~~~~~~~~~~~~~~---------~~~~-~~~~~l-------~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~ 109 (394)
T 3okp_A 54 KTLDYEVIRWPRSVM---------LPTP-TTAHAM-------AEIIRE-------REIDNVWFGAAAPLALMAGTAKQAG 109 (394)
T ss_dssp TTCSSEEEEESSSSC---------CSCH-HHHHHH-------HHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTT
T ss_pred CCCCEEEEECCCCCC---------CCCH-HHHHHH-------HHHHHH-------CCCCEEEECCCCHHHHHHHHHHHCC
T ss_conf 456628998456545---------5551-469999-------999876-------3898899888544889999997518
Q ss_pred CC-EEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 97-99995799600369987319997003368999998999997311179899279899999970026862678999998
Q 001705 328 VP-MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRV 406 (1024)
Q Consensus 328 ip-iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~ 406 (1024)
+| +|++.|+..... .... ..+.+ .+..++.+|.+++.|+...+.+...+..
T Consensus 110 ~~~~i~~~h~~~~~~------------~~~~---~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~~~~----------- 161 (394)
T 3okp_A 110 ASKVIASTHGHEVGW------------SMLP---GSRQS--LRKIGTEVDVLTYISQYTLRRFKSAFGS----------- 161 (394)
T ss_dssp CSEEEEECCSTHHHH------------TTSH---HHHHH--HHHHHHHCSEEEESCHHHHHHHHHHHCS-----------
T ss_pred CCCEEEEECCCHHHH------------HHCC---HHHHH--HHHHHHHCCEEEECCHHHHHHHHHHCCC-----------
T ss_conf 981999934642333------------2122---03489--9999986797997688999999984189-----------
Q ss_pred HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 54047434588899689959999899964468989983110012576545557998305887532079999589998389
Q 001705 407 RRQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRP 486 (1024)
Q Consensus 407 ~~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRl 486 (1024)
..++.+||||+|...|.+... ........++...++.++|+++||+
T Consensus 162 ------------~~~~~vi~ngv~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~i~~~G~~ 207 (394)
T 3okp_A 162 ------------HPTFEHLPSGVDVKRFTPATP----------------------EDKSATRKKLGFTDTTPVIACNSRL 207 (394)
T ss_dssp ------------SSEEEECCCCBCTTTSCCCCH----------------------HHHHHHHHHTTCCTTCCEEEEESCS
T ss_pred ------------CCCEEEECCCCCHHHCCCCCC----------------------HHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf ------------998588369858887588772----------------------1468999864998576699997644
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
Q ss_conf 987899999999941415579983999-9915999300013315899999999987199997783999998979999997
Q 001705 487 DPKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRL 565 (1024)
Q Consensus 487 d~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~ 565 (1024)
.+.||++.+++|+..+.. ..+++.| |+|+++.. ..+.+++ .++.++|.|+|+++.+++..+|+.
T Consensus 208 ~~~Kg~~~li~a~~~l~~--~~~~~~l~i~G~g~~~-----------~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~~~ 272 (394)
T 3okp_A 208 VPRKGQDSLIKAMPQVIA--ARPDAQLLIVGSGRYE-----------STLRRLA--TDVSQNVKFLGRLEYQDMINTLAA 272 (394)
T ss_dssp CGGGCHHHHHHHHHHHHH--HSTTCEEEEECCCTTH-----------HHHHHHT--GGGGGGEEEEESCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH--HCCCEEEEEECCCHHH-----------HHHHHHH--HCCCCEEEECCCCCHHHHHHHHHH
T ss_conf 134588799999999886--1898699998686479-----------9999987--554572999078997899999986
Q ss_pred HHCCCCEEEECCCC-------CCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHH
Q ss_conf 23189399923898-------98889999999849969981888721113049858993999999999999999739999
Q 001705 566 AAKTKGVFINPALV-------EPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNM 638 (1024)
Q Consensus 566 A~~~~Dv~v~ps~~-------Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 638 (1024)
| |++|+||.. |+||++++|||++|+|||+++.|+..|++.++ +|+++++.|+++++++|.+++.+++.
T Consensus 273 a----d~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~ 347 (394)
T 3okp_A 273 A----DIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELLDDPIR 347 (394)
T ss_dssp C----SEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHHTCHHH
T ss_pred C----CEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHHHHHHCHHH
T ss_conf 8----999945755566656555673999999759979993899737787468-85672899999999999999819999
Q ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999-609999999999999998361499
Q 001705 639 WSECRKNGLKNI-HRFSWPEHCRNYLSHVEHSRNRHP 674 (1024)
Q Consensus 639 ~~~~~~~a~~~~-~~fsw~~~a~~~l~~l~~~~~~~~ 674 (1024)
++++++++++.+ ++|||+.++++|+++|+++....+
T Consensus 348 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~ 384 (394)
T 3okp_A 348 RAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLA 384 (394)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999999998747999999999999997203761
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=1.00 E-value=1 Score=317.14 Aligned_cols=369 Identities=15% Similarity=0.170 Sum_probs=265.6
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 18999931454345777779989888078999999999980799138999816778998776669875335799999997
Q 001705 170 LYIVLISMHGLVRGDNMEIGRDSDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGS 249 (1024)
Q Consensus 170 mkIl~is~~~~~~~~~~~~gr~~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~ 249 (1024)
|||++++.+. + + .||.++++.+|+++|+++| |+|++++..... . ..
T Consensus 1 MkIl~i~~~~---------~--~-~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~--------~------------~~ 46 (374)
T 2iw1_A 1 MIVAFCLYKY---------F--P-FGGLQRDFMRIASTVAARG--HHVRVYTQSWEG--------D------------CP 46 (374)
T ss_dssp -CEEEECSEE---------C--T-TCHHHHHHHHHHHHHHHTT--CCEEEEESEECS--------C------------CC
T ss_pred CEEEEEEEEC---------C--C-CCCHHHHHHHHHHHHHHCC--CEEEEEECCCCC--------C------------CC
T ss_conf 9699997215---------8--8-7616359999999999679--848999648988--------7------------88
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 88099980489987764434677314899999999999999998754149999963499976987479999998029997
Q 001705 250 CGAYIIRIPCGARDKYIAKESLWPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADAGEVAAHLSGALNVP 329 (1024)
Q Consensus 250 ~gv~i~rip~~~~~~~~~k~~lw~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~~~~a~~l~~~~~ip 329 (1024)
+|+.+++++..... . ... .......+.+.+.+ .+||+||+|....+..+........++
T Consensus 47 ~~~~v~~~~~~~~~----~------~~~----~~~~~~~l~~~i~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~ 105 (374)
T 2iw1_A 47 KAFELIQVPVKSHT----N------HGR----NAEYYAWVQNHLKE-------HPADRVVGFNKMPGLDVYFAADVCYAE 105 (374)
T ss_dssp TTCEEEECCCCCSS----H------HHH----HHHHHHHHHHHHHH-------SCCSEEEESSCCTTCSEEECCSCCHHH
T ss_pred CCCEEEEECCCCCC----C------HHH----HHHHHHHHHHHHHC-------CCCCEEEEECCCCCCEEEECCCCCCCE
T ss_conf 77479997168644----3------016----77899999999850-------699889996677885213001565421
Q ss_pred EEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH--CCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 99995799600369987319997003368999998999997311--1798992798999999700268626789999985
Q 001705 330 MVLTGHSLGRNKFEQLLKQGRLPKDINASYKIMRRIEAEELGLD--ASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVR 407 (1024)
Q Consensus 330 iV~t~H~l~~~~~~~l~~~g~~~~~i~~~y~~~~~i~~e~~~l~--~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~~ 407 (1024)
.+.+.|+... .....+.....+ ++..+. .+|.|+++|+...+.+...++. ..
T Consensus 106 ~~~~~~~~~~--------------~~~~~~~~~~~~--~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~--------- 159 (374)
T 2iw1_A 106 KVAQEKGFLY--------------RLTSRYRHYAAF--ERATFEQGKSTKLMMLTDKQIADFQKHYQT-EP--------- 159 (374)
T ss_dssp HHHHHCCHHH--------------HTSHHHHHHHHH--HHHHHSTTCCCEEEESCHHHHHHHHHHHCC-CG---------
T ss_pred EEEECCCCHH--------------HHCHHHHHHHHH--HHHHHHCCCCCEEEECCHHHHHHHHHHHCC-CH---------
T ss_conf 3330356212--------------104778999999--999864267757998698999999997189-71---------
Q ss_pred HHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 40474345888996899599998999644689899831100125765455579983058875320799995899983899
Q 001705 408 RQRGVSCFGRFMPRMVVIPPGMDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPD 487 (1024)
Q Consensus 408 ~~~g~~~~g~~~~ki~VIPnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld 487 (1024)
.++.+||||+|...|.+... .+.......++..++++++|+++||+.
T Consensus 160 ------------~~~~vi~ngv~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~i~~~G~~~ 206 (374)
T 2iw1_A 160 ------------ERFQILPPGIYPDRKYSEQI---------------------PNSREIYRQKNGIKEQQNLLLQVGSDF 206 (374)
T ss_dssp ------------GGEEECCCCCCGGGSGGGSC---------------------TTHHHHHHHHTTCCTTCEEEEEECSCT
T ss_pred ------------HHEEEECCCCCHHHCCCCCC---------------------HHHHHHHHHHHCCCCCCEEEEEECCCH
T ss_conf ------------10688569858776176442---------------------357999999728997872999964641
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHH
Q ss_conf 87899999999941415579983999-99159993000133158999999999871999977839999989799999972
Q 001705 488 PKKNVTTLLKAFGECQPLRELANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLA 566 (1024)
Q Consensus 488 ~~Kgi~~ll~A~~~l~~l~~~~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A 566 (1024)
+.||++.+++|+..+... ..+++.| ++|+++. ..+.+++.++++.++|.|+|+ .+++..+|+.|
T Consensus 207 ~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 271 (374)
T 2iw1_A 207 GRKGVDRSIEALASLPES-LRHNTLLFVVGQDKP------------RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAA 271 (374)
T ss_dssp TTTTHHHHHHHHHTSCHH-HHHTEEEEEESSSCC------------HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHC
T ss_pred HHCCHHHHHHHHHHHHHC-CCCCEEEEEECCCCH------------HHHHHHHHHCCCCCCEEECCC--CCCHHHHHHHC
T ss_conf 013889999999986760-488669999708987------------999999997398773797788--40389999846
Q ss_pred HCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEEC-CCCHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 3189399923898988899999998499699818887211130498589939-999999999999997399999999999
Q 001705 567 AKTKGVFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDILKALNNGLLVD-PHDQNAIADALLKLLADKNMWSECRKN 645 (1024)
Q Consensus 567 ~~~~Dv~v~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~-p~d~~~la~aI~~ll~d~~~~~~~~~~ 645 (1024)
|++|+||..|+||++++|||+||+|||+++.||..|++.++.+|++++ |.|+++++++|.+++++++.+++++++
T Consensus 272 ----d~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~ 347 (374)
T 2iw1_A 272 ----DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAEN 347 (374)
T ss_dssp ----SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ----CEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf ----8898354247755699999977998898269980444306983199679999899999999997194999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999609999999999999998361
Q 001705 646 GLKNIHRFSWPEHCRNYLSHVEHSRN 671 (1024)
Q Consensus 646 a~~~~~~fsw~~~a~~~l~~l~~~~~ 671 (1024)
+++.++.|+|..+++.+.+.++.++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 348 ARHYADTQDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp HHHHHHHSCCSCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999875389999999999998636
No 10
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=316.34 Aligned_cols=361 Identities=18% Similarity=0.258 Sum_probs=267.8
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 98880789999999999807991389998167789987766698753357999999978809998048998776443467
Q 001705 192 SDTGGQVKYVVELARALANTEGVYRVDLLTRQIASPEVDSSYGEPNEMLSCPSDGTGSCGAYIIRIPCGARDKYIAKESL 271 (1024)
Q Consensus 192 ~~~GG~~~~v~~La~aLa~~g~v~~V~vlt~~~~~p~~~~~y~~~~e~l~~~~~~~~~~gv~i~rip~~~~~~~~~k~~l 271 (1024)
|..||.+.++.+|+++|+++| |+|+++|...... .. ...+++.++.++.... ..+. .
T Consensus 24 p~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~---------~~--------~~~~~i~~~~~~~~~~-~~~~---~ 80 (394)
T 2jjm_A 24 PSVGGSGVVGTELGKQLAERG--HEIHFITSGLPFR---------LN--------KVYPNIYFHEVTVNQY-SVFQ---Y 80 (394)
T ss_dssp C--CHHHHHHHHHHHHHHHTT--CEEEEECSSCC---------------------CCCTTEEEECCCCC-----CC---S
T ss_pred CCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCC---------CC--------CCCCCEEEEECCCCCC-CCCC---C
T ss_conf 898987899999999999689--8799996888776---------20--------0378628985256665-4001---5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCH-HHHHHHHHCCC--CCCEEEEECCCCHHHHHHHHHC
Q ss_conf 73148999999999999999987541499999634999769874-79999998029--9979999579960036998731
Q 001705 272 WPYIHEFVDGALNHIVNMARAIGEQVNGGKPTWPYVIHGHYADA-GEVAAHLSGAL--NVPMVLTGHSLGRNKFEQLLKQ 348 (1024)
Q Consensus 272 w~~~~~f~~~~l~~~~~~~~~l~~~~~~g~~~~pDvIh~h~~~~-~~~a~~l~~~~--~ipiV~t~H~l~~~~~~~l~~~ 348 (1024)
.++. +.....+.+.+.+ .+||+||+|+... ...+.+.++.. ++|+|++.|+..... .
T Consensus 81 ~~~~-------~~~~~~l~~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------~ 140 (394)
T 2jjm_A 81 PPYD-------LALASKMAEVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------L 140 (394)
T ss_dssp CCHH-------HHHHHHHHHHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT------T
T ss_pred CCCC-------HHHHHHHHHHHHH-------CCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC------C
T ss_conf 6520-------7999999999977-------699999972433777889998886267877799971575212------5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
Q ss_conf 99970033689999989999973111798992798999999700268626789999985404743458889968995999
Q 001705 349 GRLPKDINASYKIMRRIEAEELGLDASEMVVTSTRQEIEMQWGLYDGFDLKLERKLRVRRQRGVSCFGRFMPRMVVIPPG 428 (1024)
Q Consensus 349 g~~~~~i~~~y~~~~~i~~e~~~l~~Ad~Vi~~S~~~~~~~~~l~~~f~~~~~~~l~~~~~~g~~~~g~~~~ki~VIPnG 428 (1024)
+.. . .+ +. .++..++.+|.|+++|+...+.+...+.. ..++.+||||
T Consensus 141 ~~~-~----~~---~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-----------------------~~~~~vi~ng 187 (394)
T 2jjm_A 141 GSD-P----SL---NN--LIRFGIEQSDVVTAVSHSLINETHELVKP-----------------------NKDIQTVYNF 187 (394)
T ss_dssp TTC-T----TT---HH--HHHHHHHHSSEEEESCHHHHHHHHHHTCC-----------------------SSCEEECCCC
T ss_pred CCC-H----HH---HH--HHHHHHHHCCEEEECCHHHHHHHHHHHCC-----------------------CCCEEEECCC
T ss_conf 888-7----78---89--99999861998999799999999985287-----------------------6567995587
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 98999644689899831100125765455579983058875320799995899983899878999999999414155799
Q 001705 429 MDFSYVTTQDTMGGDTDLKSLIGNDRTQSKRNLPPMWSEVMRFFTNPHKPTILALSRPDPKKNVTTLLKAFGECQPLREL 508 (1024)
Q Consensus 429 iD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Il~vgRld~~Kgi~~ll~A~~~l~~l~~~ 508 (1024)
+|...|.+... .....++..+++.+.|+++||+.+.||++.+++|+..+.+.
T Consensus 188 v~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~--- 239 (394)
T 2jjm_A 188 IDERVYFKRDM-------------------------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE--- 239 (394)
T ss_dssp CCTTTCCCCCC-------------------------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS---
T ss_pred CCHHHCCCCCH-------------------------HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH---
T ss_conf 56876088634-------------------------88998719998880899950466535889999999999853---
Q ss_pred CCEEE-EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHH
Q ss_conf 83999-99159993000133158999999999871999977839999989799999972318939992389898889999
Q 001705 509 ANMTL-ILGNRDDIEDMSNSSSVVLTTVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPALVEPFGLTII 587 (1024)
Q Consensus 509 ~~l~L-IiG~~~~~~~l~~~~~~~~~~i~~li~~~~l~~~V~~~g~~~~~el~~ly~~A~~~~Dv~v~ps~~Egfgl~ll 587 (1024)
.++.| ++|+++. ..++.+++.++++.++|.|.|+ .+++..+|+.| |++|+||..|+||++++
T Consensus 240 ~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~a----dv~v~ps~~e~~~~~~~ 302 (394)
T 2jjm_A 240 VDAKLLLVGDGPE-----------FCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMS----DLMLLLSEKESFGLVLL 302 (394)
T ss_dssp SCCEEEEECCCTT-----------HHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTC----SEEEECCSCCSCCHHHH
T ss_pred CCCEEEEECCCHH-----------HHHHHHHHHHCCCCCEEEEECC--HHHHHHHHHHC----CEEEECCCCCCCCHHHH
T ss_conf 7978999889657-----------9999999997399875999276--66599999867----89996566678726899
Q ss_pred HHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHH
Q ss_conf 999849969981888721113049858993999999999999999739999999999999999-6099999999999999
Q 001705 588 EAAAYGLPVVATKNGGPVDILKALNNGLLVDPHDQNAIADALLKLLADKNMWSECRKNGLKNI-HRFSWPEHCRNYLSHV 666 (1024)
Q Consensus 588 EAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~a~~~~-~~fsw~~~a~~~l~~l 666 (1024)
|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.+++.+++.++++++++++.+ +.|||+.++++|+++|
T Consensus 303 EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 382 (394)
T 2jjm_A 303 EAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIY 382 (394)
T ss_dssp HHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 99964998898158980777634885399689999999999999974979999999999999987379999999999999
Q ss_pred HHHHHCC
Q ss_conf 9836149
Q 001705 667 EHSRNRH 673 (1024)
Q Consensus 667 ~~~~~~~ 673 (1024)
+++....
T Consensus 383 ~~~~~~~ 389 (394)
T 2jjm_A 383 YDVLRDD 389 (394)
T ss_dssp HHTC---
T ss_pred HHHHHHH
T ss_conf 9999666
Done!